BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy345
(462 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 2/178 (1%)
Query: 162 PLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKL 221
P + G P G+ H + DVS + ++ FSRPP+V+V+CAGIT+D + L +
Sbjct: 54 PGSKEGPPRGN--HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHM 111
Query: 222 TEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAG 281
+E D+ +V VNLKGTFLV+QA + LV VG++GN+GQ+NYAA+KAG
Sbjct: 112 SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAG 171
Query: 282 VEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAV 339
V T++ A E+ GIRCN +LPGFI TPMT VP KV + T +IP+ G PE V
Sbjct: 172 VIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDV 229
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 101/163 (61%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
H + DVS + ++ FSRPP+V+V+CAGIT+D + L ++E D+ +V VNL
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 124
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 127
KGTFLV+QA + LV VG++GN+GQ+NYAA+KAGV T++ A E+
Sbjct: 125 KGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG 184
Query: 128 TFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
GIRCN +LPGFI TPM VP KV + T +IP+ G PE
Sbjct: 185 RHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPE 227
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 80/124 (64%)
Query: 337 EAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCN 396
+A + LV VG++GN+GQ+NYAA+KAGV T++ A E+ GIRCN
Sbjct: 132 QAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCN 191
Query: 397 VILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKV 456
+LPGFI TPMT VP KV + T +IP G PE++ +V+ FLAS+ S YITGT ++V
Sbjct: 192 SVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEV 251
Query: 457 TGGL 460
TGGL
Sbjct: 252 TGGL 255
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 123/225 (54%), Gaps = 19/225 (8%)
Query: 116 EAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTH 175
K++A ++ G N++L G +P TS+ D E F K G +
Sbjct: 15 RGLGKAIAWKLGNMG--ANIVLNG---SPASTSL-DATAEEF----------KAAGINVV 58
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
++ DV N + + T + F R ++LVN AGITRD LK++EKD+ V + NLK
Sbjct: 59 VA-KGDVKNPEDVENMVKTAMDAFGRI-DILVNNAGITRDTLMLKMSEKDWDDVLNTNLK 116
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
+L ++AV K +++ K G +GN GQ+NYAA+KAG+ FTKS+A E A
Sbjct: 117 SAYLCTKAVSKIMLKQKSGKIINITSI-AGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 296 FGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
GI CN + PG I+T MT +PDKVKE + IPLKRFG PE V
Sbjct: 176 KGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVA 220
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
P DV N + TAM A F R ++LVN AGITRD LK++EKD+ V + NLK +
Sbjct: 67 PEDVENM--VKTAMDA----FGRI-DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAY 119
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
L ++AV K +++ K G +GN GQ+NYAA+KAG+ FTKS+A E A GI
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSI-AGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178
Query: 132 RCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
CN + PG I+T M +PDKVKE + IPLKRFG PE
Sbjct: 179 YCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPE 217
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G +GN GQ+NYAA+KAG+ FTKS+A E A GI CN + PG I+T MT +PDKVKE +
Sbjct: 145 GIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMY 204
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP KRFG PEE+ V+ FLASD S+YITG +I + GGL
Sbjct: 205 LNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DVS S + + + E++ R +VLVN AGITRD L++ D+Q V D+NL G FL
Sbjct: 86 DVSQESEVEALFAAVIERWGRL-DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLC 144
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
S+A K +++ + VG+MGN GQ+NY+A KAGV TK+VA E+A+ GI
Sbjct: 145 SRAAAKIMLKQRSGRIINIASV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
N + PGFI T MT+ + E +IPL R+G+ V
Sbjct: 204 NAVAPGFIATDMTSELA---AEKLLEVIPLGRYGEAAEVA 240
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DVS S + +A+ E++ R +VLVN AGITRD L++ D+Q V D+NL G FL
Sbjct: 86 DVSQESEVEALFAAVIERWGRL-DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLC 144
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
S+A K +++ + VG+MGN GQ+NY+A KAGV TK+VA E+A+ GI
Sbjct: 145 SRAAAKIMLKQRSGRIINIASV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGK 168
N + PGFI T M + + E +IPL R+G+
Sbjct: 204 NAVAPGFIATDMTSELA---AEKLLEVIPLGRYGE 235
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG+MGN GQ+NY+A KAGV TK+VA E+A+ GI N + PGFI T MT+ + E
Sbjct: 167 VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS---ELAAEK 223
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASD-RSSYITGTLIKVTGGL 460
+IP R+G+ E+ V+ FLA+D ++YITG +I + GGL
Sbjct: 224 LLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL 266
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 105 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLK 164
Q A +++A+E+ G I T S +K+ ET LK
Sbjct: 26 QGKVALVTGASRGIGQAIALELGRLGAVV-------IGTATSASGAEKIAET------LK 72
Query: 165 RFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEK 224
G EG+ L +DVS+ +++ + I++ +P ++VN AGITRDN +++ +
Sbjct: 73 ANG-VEGAG----LVLDVSSDESVAATLEHIQQHLGQPL-IVVNNAGITRDNLLVRMKDD 126
Query: 225 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 284
++ V + NL + +S+AV + + + + VG MGN GQ+NYAA KAG+E
Sbjct: 127 EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSV-VGAMGNAGQTNYAAAKAGLEG 185
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCK 341
FT+++A E+ + I N + PGFI+T MT +P+ +E IPL R G+ E + K
Sbjct: 186 FTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAK 242
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
L +DVS+ +++ + I++ +P ++VN AGITRDN +++ + ++ V + NL
Sbjct: 81 LVLDVSSDESVAATLEHIQQHLGQPL-IVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSL 139
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
+ +S+AV + + + + VG MGN GQ+NYAA KAG+E FT+++A E+ +
Sbjct: 140 YRLSKAVLRGMTKARWGRIINIGSV-VGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRA 198
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I N + PGFI+T M +P+ +E IPL R G+ E
Sbjct: 199 ITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAE 238
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAG+E FT+++A E+ + I N + PGFI+T MT +P+ +E
Sbjct: 165 VGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREA 224
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP R G+ EEI +V+ FLASD ++Y+TG + V GG+
Sbjct: 225 LLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGM 266
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 91/147 (61%), Gaps = 8/147 (5%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGITRD FL+++ D+++V VNL GTFLV+Q +++++ +
Sbjct: 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSV- 145
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
VG GN+GQ NY+ TKAG+ FTKS+A E+A + N + PGFIET MT + +++K+
Sbjct: 146 VGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQK 205
Query: 324 FTRLIPLKRFGKPEAV-------CKEL 343
+ IPL RFG PE V C EL
Sbjct: 206 YKEQIPLGRFGSPEEVANVVLFLCSEL 232
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGITRD FL+++ D+++V VNL GTFLV+Q +++++ +
Sbjct: 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSV- 145
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
VG GN+GQ NY+ TKAG+ FTKS+A E+A + N + PGFIET M + +++K+
Sbjct: 146 VGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQK 205
Query: 157 FTRLIPLKRFGKPE 170
+ IPL RFG PE
Sbjct: 206 YKEQIPLGRFGSPE 219
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 69/102 (67%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN+GQ NY+ TKAG+ FTKS+A E+A + N + PGFIET MT + +++K+
Sbjct: 146 VGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQK 205
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ IP RFG PEE+ V+ FL S+ +SYITG +I V GG+
Sbjct: 206 YKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ ++V+N +I + I ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+ N + PGFIET MT ++ D+ + +P R G P +
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIA 223
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
+ ++V+N +I + AI ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ N + PGFIET M ++ D+ + +P R G P
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDP 219
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAGV FTKS+A E+A+ G+ N + PGFIET MT + D+ +
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTA 206
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P EI + FLAS ++YITG + V GG+
Sbjct: 207 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+NYAA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMK-KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
I NV+ PGFIET MT ++ D + +P R G + +
Sbjct: 174 ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIA 216
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+NYAA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMK-KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I NV+ PGFIET M ++ D + +P R G +
Sbjct: 174 ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQ 213
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAG+ F+KS+A E+A+ GI NV+ PGFIET MT + D +
Sbjct: 140 VGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAG 199
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G +EI + FLASD ++YITG + V GG+
Sbjct: 200 ILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 241
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ ++V+N +I + I ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+N+AA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRG 180
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+ N + PGFIET MT ++ D+ + +P R G P +
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIA 223
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
+ ++V+N +I + AI ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+N+AA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRG 180
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ N + PGFIET M ++ D+ + +P R G P
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDP 219
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+N+AA KAGV FTKS+A E+A+ G+ N + PGFIET MT + D+ +
Sbjct: 147 VGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTA 206
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P EI + FLAS ++YITG + V GG+
Sbjct: 207 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ ++V+N +I + I ++F ++LVN A ITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+ N + PGFIET MT ++ D+ + +P R G P +
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIA 223
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
+ ++V+N +I + AI ++F ++LVN A ITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ N + PGFIET M ++ D+ + +P R G P
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDP 219
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAGV FTKS+A E+A+ G+ N + PGFIET MT + D+ +
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTA 206
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P EI + FLAS ++YITG + V GG+
Sbjct: 207 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ ++V+N +I + I ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+ N + PG IET MT ++ D+ + +P R G P +
Sbjct: 181 VTVNTVAPGAIETDMTKALNDEQRTATLAQVPAGRLGDPREIA 223
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
+ ++V+N +I + AI ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ N + PG IET M ++ D+ + +P R G P
Sbjct: 181 VTVNTVAPGAIETDMTKALNDEQRTATLAQVPAGRLGDP 219
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAGV FTKS+A E+A+ G+ N + PG IET MT + D+ +
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTKALNDEQRTA 206
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P EI + FLAS ++YITG + V GG+
Sbjct: 207 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ ++V+N +I + I ++F ++LVN A ITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+ N + PGFIET MT ++ D+ + +P R G P +
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIA 223
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
+ ++V+N +I + AI ++F ++LVN A ITRDN +++ E+++ + + NL
Sbjct: 63 MALNVTNPESIEAVLKAITDEFG-GVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSI 121
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+NYAA KAGV FTKS+A E+A+ G
Sbjct: 122 FRLSKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ N + PGFIET M ++ D+ + +P R G P
Sbjct: 181 VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDP 219
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+NYAA KAGV FTKS+A E+A+ G+ N + PGFIET MT + D+ +
Sbjct: 147 VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTA 206
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P EI + FLAS ++YITG + V GG+
Sbjct: 207 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 248
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 183 SNTSTISTAMSTIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLKG F
Sbjct: 67 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
Q +++ + VG +GN GQ+NY ATKAGV TKS A E+A+ GI
Sbjct: 127 IQKATPQMLRQRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 185
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKP 336
N + PGFI + MT ++ D++KE IPL RFG+
Sbjct: 186 NAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQD 221
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLKG F
Sbjct: 67 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
Q +++ + VG +GN GQ+NY ATKAGV TKS A E+A+ GI
Sbjct: 127 IQKATPQMLRQRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 185
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
N + PGFI + M ++ D++KE IPL RFG+
Sbjct: 186 NAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQD 221
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 66/102 (64%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +GN GQ+NY ATKAGV TKS A E+A+ GI N + PGFI + MT + D++KE
Sbjct: 149 VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQ 208
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP RFG+ +I + FLASD++ YITG I V GG+
Sbjct: 209 MLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 250
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ K VG MGN GQ+N+AA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMK-KRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
I NV+ PGFIET MT ++ D + +P R G + +
Sbjct: 174 ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIA 216
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ K VG MGN GQ+N+AA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMK-KRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I NV+ PGFIET M ++ D + +P R G +
Sbjct: 174 ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQ 213
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG MGN GQ+N+AA KAG+ F+KS+A E+A+ GI NV+ PGFIET MT + D +
Sbjct: 140 VGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAG 199
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G +EI + FLASD ++YITG + V GG+
Sbjct: 200 ILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 241
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+ LVN AGITRD +++ ++D++ V + NL F ++ K +++ +
Sbjct: 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSV- 140
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
VG +GN GQ+NY A+KAG+ FT++VA E A GI N + PGFIET MT +P +VKE
Sbjct: 141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEA 200
Query: 324 FTRLIPLKRFGKPEAVCK 341
+ + IP RFG+PE V +
Sbjct: 201 YLKQIPAGRFGRPEEVAE 218
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +GN GQ+NY A+KAG+ FT++VA E A GI N + PGFIET MT +P +VKE
Sbjct: 141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEA 200
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ + IP RFG+PEE+ E + FL S+++ YITG + V GGL
Sbjct: 201 YLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+ LVN AGITRD +++ ++D++ V + NL F ++ K +++ +
Sbjct: 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSV- 140
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
VG +GN GQ+NY A+KAG+ FT++VA E A GI N + PGFIET M +P +VKE
Sbjct: 141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEA 200
Query: 157 FTRLIPLKRFGKPE 170
+ + IP RFG+PE
Sbjct: 201 YLKQIPAGRFGRPE 214
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DVS IS ++ I + + ++LVN AGITRDN FL++ +++ V NL F +
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 159
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
+Q + K ++ + VG GN+GQ+NY+++KAGV FTKS+A E+A+ I
Sbjct: 160 TQPISKRMINNRYGRIINISSI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
N I PGFI + MT + +++K+ IP R G PE V
Sbjct: 219 NAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVA 258
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DVS IS ++ I + + ++LVN AGITRDN FL++ +++ V NL F +
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 159
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
+Q + K ++ + VG GN+GQ+NY+++KAGV FTKS+A E+A+ I
Sbjct: 160 TQPISKRMINNRYGRIINISSI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
N I PGFI + M + +++K+ IP R G PE
Sbjct: 219 NAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPE 255
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN+GQ+NY+++KAGV FTKS+A E+A+ I N I PGFI + MT + +++K+
Sbjct: 182 VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKN 241
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
IP R G PEE+ + CFL+SD+S YI G + + GGL+
Sbjct: 242 IISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS 284
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++ +++ + R V V+ AGITRDN+ K +D++ V VNL G+FLV
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGV-VHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLV 115
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
++A E K V +GN+GQ+NYAA+ AGV T+++A+E+ +GIR
Sbjct: 116 AKA-ASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGIRV 173
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKP 336
N + PGFIET T VP+KV+E PL R GKP
Sbjct: 174 NTLAPGFIETRXTAKVPEKVREKAIAATPLGRAGKP 209
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++ +++ + R V V+ AGITRDN+ K +D++ V VNL G+FLV
Sbjct: 57 DVADPASVERGFAEALAHLGRLDGV-VHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLV 115
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
++A E K V +GN+GQ+NYAA+ AGV T+++A+E+ +GIR
Sbjct: 116 AKA-ASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGIRV 173
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
N + PGFIET VP+KV+E PL R GKP
Sbjct: 174 NTLAPGFIETRXTAKVPEKVREKAIAATPLGRAGKP 209
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%)
Query: 362 MGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR 421
+GN+GQ+NYAA+ AGV T+++A+E+ +GIR N + PGFIET T VP+KV+E
Sbjct: 140 LGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXTAKVPEKVREKAIA 199
Query: 422 LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P R GKP E+ FL SD SS+ITG ++ V GG
Sbjct: 200 ATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 151 DKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCA 210
DKV T+ P PEG L++ D+++T + A I+E P VL+ A
Sbjct: 46 DKVAITYRSGEP------PEG---FLAVKCDITDTEQVEQAYKEIEETHG-PVEVLIANA 95
Query: 211 GITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNM 270
G+T+D ++++E+DF V + NL GTF V + + ++ K VG +G+
Sbjct: 96 GVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSV-VGLLGSA 154
Query: 271 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL 330
GQ+NYAA+KAG+ F +S+A E+ + I NV+ PGF++T MT + D+ + +PL
Sbjct: 155 GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPL 214
Query: 331 KRFGKPEAVC 340
R+ +PE +
Sbjct: 215 GRYARPEEIA 224
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ D+++T + A I+E P VL+ AG+T+D ++++E+DF V + NL
Sbjct: 62 LAVKCDITDTEQVEQAYKEIEETHG-PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLT 120
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
GTF V + + ++ K VG +G+ GQ+NYAA+KAG+ F +S+A E+ +
Sbjct: 121 GTFRVVKRANRAMLRAKKGRVVLISSV-VGLLGSAGQANYAASKAGLVGFARSLARELGS 179
Query: 129 FGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I NV+ PGF++T M + D+ + +PL R+ +PE
Sbjct: 180 RNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPE 221
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 68/103 (66%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +G+ GQ+NYAA+KAG+ F +S+A E+ + I NV+ PGF++T MT + D+ +
Sbjct: 148 VGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRAN 207
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+P R+ +PEEI + FLASD +SYITG +I V GGL
Sbjct: 208 IVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLG 250
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DVS + + M T + + +V+VN AGITRD +++ + + +V D+NL G FL
Sbjct: 59 DVSKEADVEAMMKTAIDAWG-TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
+QA K +++ K VG +GN+GQ+NYAA KAGV F+K+ A E A+ I
Sbjct: 118 TQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELVE 345
NV+ PGFI + MT + + +++ IPL R G+PE V LVE
Sbjct: 177 NVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAG-LVE 220
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DVS + + M + + +V+VN AGITRD +++ + + +V D+NL G FL
Sbjct: 59 DVSKEADVEAMMKTAIDAWG-TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
+QA K +++ K VG +GN+GQ+NYAA KAGV F+K+ A E A+ I
Sbjct: 118 TQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
NV+ PGFI + M + + +++ IPL R G+PE
Sbjct: 177 NVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPE 213
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +GN+GQ+NYAA KAGV F+K+ A E A+ I NV+ PGFI + MT + + +++
Sbjct: 140 VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK 199
Query: 419 FTRLIPFKRFGKPEEIGEVICFLA-SDRSSYITGTLIKVTGGLA 461
IP R G+PE + ++ FLA S +SYITG + GG+A
Sbjct: 200 ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA 243
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
+G+ GNMGQ+NY+A+K G+ A +KS A E A IR N + PGFIET M + D++K
Sbjct: 168 IGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKAD 227
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ + IP R G +E+ E + FL SD SSYITG +KV GGL
Sbjct: 228 YVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
+ D ++ S A+ TI + + LVN AG+ RD +K+ +DF V D NL
Sbjct: 84 IKFDAASESDFIEAIQTIVQS-DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSA 142
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F+ + K + +++ +G+ GNMGQ+NY+A+K G+ A +KS A E A
Sbjct: 143 FIGCREALKVMSKSRFGSVVNVASI-IGERGNMGQTNYSASKGGMIAMSKSFAYEGALRN 201
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCK 341
IR N + PGFIET M ++ D++K + + IPL R G + V +
Sbjct: 202 IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAE 245
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Query: 39 LVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVG 98
LVN AG+ RD +K+ +DF V D NL F+ + K + +++ +G
Sbjct: 111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASI-IG 169
Query: 99 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFT 158
+ GNMGQ+NY+A+K G+ A +KS A E A IR N + PGFIET M ++ D++K +
Sbjct: 170 ERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYV 229
Query: 159 RLIPLKRFGKPE 170
+ IPL R G +
Sbjct: 230 KNIPLNRLGSAK 241
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
++V++ + + + + ++F NVLVN AGIT+D +++ + ++ V D NLK F
Sbjct: 84 LNVNDATAVDALVESTLKEFG-ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFR 142
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+S+AV + +++ + VG GN GQ NYAA KAGV T+++A E+ + GI
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSV-VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
N + PGFI+T MT +P + + IPL R G PE + +
Sbjct: 202 VNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAV 245
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
++V++ + + + + ++F NVLVN AGIT+D +++ + ++ V D NLK F
Sbjct: 84 LNVNDATAVDALVESTLKEFG-ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFR 142
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+S+AV + +++ + VG GN GQ NYAA KAGV T+++A E+ + GI
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSV-VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
N + PGFI+T M +P + + IPL R G PE
Sbjct: 202 VNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPE 239
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ NYAA KAGV T+++A E+ + GI N + PGFI+T MT +P + +
Sbjct: 166 VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTA 225
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP R G PE+I + FLAS ++ YITGT + V GG+
Sbjct: 226 LKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGM 267
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 183 SNTSTISTAMSTIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
+N + + IKE S+ +VLVN AGITRDN + E+++ V D NLKG F
Sbjct: 61 ANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
Q + + + VG +GN GQ+NY ATKAGV TKS A E+A+ GI
Sbjct: 121 IQKATPQXLRQRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 179
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGK 335
N + PGFI + T ++ D++KE IPL RFG+
Sbjct: 180 NAVAPGFIVSDXTDALSDELKEQXLTQIPLARFGQ 214
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
+N + + IKE S+ +VLVN AGITRDN + E+++ V D NLKG F
Sbjct: 61 ANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
Q + + + VG +GN GQ+NY ATKAGV TKS A E+A+ GI
Sbjct: 121 IQKATPQXLRQRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 179
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGK 168
N + PGFI + ++ D++KE IPL RFG+
Sbjct: 180 NAVAPGFIVSDXTDALSDELKEQXLTQIPLARFGQ 214
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 64/101 (63%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +GN GQ+NY ATKAGV TKS A E+A+ GI N + PGFI + T + D++KE
Sbjct: 143 VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDXTDALSDELKEQ 202
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP RFG+ +I + FLASD++ YITG I V GG
Sbjct: 203 XLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
++V+N +I + I ++F ++LVN AGITRDN + E+++ + + NL F
Sbjct: 62 LNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFR 120
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+S+AV + + K VG GN GQ+NYAA KAGV FTKS A E+A+ G+
Sbjct: 121 LSKAVLRGXXK-KRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVT 179
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
N + PGFIET T ++ D+ + +P R G P +
Sbjct: 180 VNTVAPGFIETDXTKALNDEQRTATLAQVPAGRLGDPREIA 220
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
++V+N +I + AI ++F ++LVN AGITRDN + E+++ + + NL F
Sbjct: 62 LNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFR 120
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+S+AV + + K VG GN GQ+NYAA KAGV FTKS A E+A+ G+
Sbjct: 121 LSKAVLRGXXK-KRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVT 179
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
N + PGFIET ++ D+ + +P R G P
Sbjct: 180 VNTVAPGFIETDXTKALNDEQRTATLAQVPAGRLGDP 216
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 61/101 (60%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NYAA KAGV FTKS A E+A+ G+ N + PGFIET T + D+ +
Sbjct: 144 VGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETDXTKALNDEQRTA 203
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+P R G P EI + FLAS ++YITG + V GG
Sbjct: 204 TLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 163 LKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLT 222
+K+ G S +++ DV+N ++ + + F + ++LVN AG+T+DN +++
Sbjct: 49 IKKLG-----SDAIAVRADVANAEDVTNMVKQTVDVFGQV-DILVNNAGVTKDNLLMRMK 102
Query: 223 EKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGV 282
E+++ V + NLKG FL ++AV + ++ + VG GN GQ+NY A KAGV
Sbjct: 103 EEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASV-VGVTGNPGQANYVAAKAGV 161
Query: 283 EAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
TK+ A E+A+ I N I PGFI T MT + + +K +LIP +FG+ + +
Sbjct: 162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIA 219
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65
S +++ DV+N ++ + + F + ++LVN AG+T+DN +++ E+++ V +
Sbjct: 54 SDAIAVRADVANAEDVTNMVKQTVDVFGQV-DILVNNAGVTKDNLLMRMKEEEWDTVINT 112
Query: 66 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 125
NLKG FL ++AV + ++ + VG GN GQ+NY A KAGV TK+ A E
Sbjct: 113 NLKGVFLCTKAVSRFMMRQRHGRIVNIASV-VGVTGNPGQANYVAAKAGVIGLTKTSAKE 171
Query: 126 MATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
+A+ I N I PGFI T M + + +K +LIP +FG+ +
Sbjct: 172 LASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQ 216
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NY A KAGV TK+ A E+A+ I N I PGFI T MT + + +K
Sbjct: 143 VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAE 202
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+LIP +FG+ ++I + F ASD+S YITG + V GG+
Sbjct: 203 MLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LV AGIT D +++ ++DF +V D+NLK F++++ K++++ K
Sbjct: 86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ-KRYGRIINISSI 144
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
VG GN GQ+NY A+KAG+ TKS++ E+AT GI N + PGFI++ MT + +K +E
Sbjct: 145 VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREA 204
Query: 324 FTRLIPLKRFGKPEAV 339
+ IPL +G PE V
Sbjct: 205 IVQKIPLGTYGIPEDV 220
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LV AGIT D +++ ++DF +V D+NLK F++++ K++++ K
Sbjct: 86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ-KRYGRIINISSI 144
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
VG GN GQ+NY A+KAG+ TKS++ E+AT GI N + PGFI++ M + +K +E
Sbjct: 145 VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREA 204
Query: 157 FTRLIPLKRFGKPE 170
+ IPL +G PE
Sbjct: 205 IVQKIPLGTYGIPE 218
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 67/102 (65%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NY A+KAG+ TKS++ E+AT GI N + PGFI++ MT + +K +E
Sbjct: 145 VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREA 204
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ IP +G PE++ + FLAS+ +SYITG + V GG+
Sbjct: 205 IVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM 246
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VLVN AGITRD F K+T +D+Q V D NL F V++ V +VE +
Sbjct: 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVE-RGWGRIINISSV 151
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
GQ G GQ+NY+ KAG+ FT S+A E+AT G+ N + PG+I T M+ ++ V E
Sbjct: 152 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK 211
Query: 157 FTRLIPLKRFGKPE 170
IP++R G P+
Sbjct: 212 IVATIPVRRLGSPD 225
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VLVN AGITRD F K+T +D+Q V D NL F V++ V +VE +
Sbjct: 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVE-RGWGRIINISSV 151
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
GQ G GQ+NY+ KAG+ FT S+A E+AT G+ N + PG+I T M ++ V E
Sbjct: 152 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK 211
Query: 324 FTRLIPLKRFGKPEAV 339
IP++R G P+ +
Sbjct: 212 IVATIPVRRLGSPDEI 227
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
GQ G GQ+NY+ KAG+ FT S+A E+AT G+ N + PG+I T M + V E
Sbjct: 153 GQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKI 212
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP +R G P+EIG ++ +LAS+ S + TG + GGL
Sbjct: 213 VATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 253
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 167 GKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDF 226
G P+G + +DV+++ + A + ++E P VLV+ AG++ D + +++TE+ F
Sbjct: 70 GAPKGL---FGVEVDVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKF 125
Query: 227 QQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFT 286
++V + NL G F V+Q + + K G G Q+NYAA+KAGV
Sbjct: 126 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVS-GLWGIGNQANYAASKAGVIGMA 184
Query: 287 KSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+S+A E++ + NV+ PG+I+T MT ++ +++++ + IP KR G P V
Sbjct: 185 RSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVA 238
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL
Sbjct: 76 FGVEVDVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 134
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G F V+Q + + K G G Q+NYAA+KAGV +S+A E++
Sbjct: 135 GAFRVAQRASRSMQRNKFGRMIFIASVS-GLWGIGNQANYAASKAGVIGMARSIARELSK 193
Query: 129 FGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ NV+ PG+I+T M ++ +++++ + IP KR G P
Sbjct: 194 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTP 234
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 362 MGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR 421
+GN Q+NYAA+KAGV +S+A E++ + NV+ PG+I+T MT + +++++ +
Sbjct: 167 IGN--QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQ 224
Query: 422 LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP KR G P E+ V+ FLAS+ +SYI+G +I V GG+
Sbjct: 225 FIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 263
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 5/174 (2%)
Query: 167 GKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDF 226
G P+G + +DV+++ + A + ++E P VLV+ AG++ D + +++TE+ F
Sbjct: 50 GAPKGL---FGVEVDVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKF 105
Query: 227 QQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFT 286
++V + NL G F V+Q + + K G G Q+NYAA+KAGV
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS-GLWGIGNQANYAASKAGVIGMA 164
Query: 287 KSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
+S+A E++ + NV+ PG+I+T MT ++ +++++ + IP KR G P V
Sbjct: 165 RSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVA 218
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL
Sbjct: 56 FGVEVDVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 114
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G F V+Q + + K G G Q+NYAA+KAGV +S+A E++
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVS-GLWGIGNQANYAASKAGVIGMARSIARELSK 173
Query: 129 FGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+ NV+ PG+I+T M ++ +++++ + IP KR G P
Sbjct: 174 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTP 214
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 362 MGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR 421
+GN Q+NYAA+KAGV +S+A E++ + NV+ PG+I+T MT + +++++ +
Sbjct: 147 IGN--QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQ 204
Query: 422 LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP KR G P E+ V+ FLAS+ +SYI+G +I V GG+
Sbjct: 205 FIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 2/160 (1%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV+++ + A + ++E P VLV+ AG++ D + +++TE+ F++V + NL G F V
Sbjct: 61 DVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 119
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
+Q + + K G G Q+NYAA+KAGV +S+A E++ +
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVS-GSWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
NV+ PG+I+T MT ++ +++++ + IP KR G P V
Sbjct: 179 NVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVA 218
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL G F V
Sbjct: 61 DVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 119
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
+Q + + K G G Q+NYAA+KAGV +S+A E++ +
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVS-GSWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
NV+ PG+I+T M ++ +++++ + IP KR G P
Sbjct: 179 NVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTP 214
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 66/101 (65%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G G Q+NYAA+KAGV +S+A E++ + NV+ PG+I+T MT + +++++
Sbjct: 143 GSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA 202
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ IP KR G P E+ V+ FLAS+ +SYI+G +I V GG+
Sbjct: 203 LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 7/152 (4%)
Query: 192 MSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 251
++ + E+ ++LVN AGITRD F+++ ++D+ V VNL + + +EL+ +
Sbjct: 91 LAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT----AASTLTRELIHS 146
Query: 252 ---KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFI 308
+ VG +GN GQ+NY A KAG+ F+K++A E+A+ I N I PGFI
Sbjct: 147 MMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFI 206
Query: 309 ETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
++ MT + +K KE +IP+KR G E +
Sbjct: 207 KSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIA 238
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 25 MSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 84
++ + E+ ++LVN AGITRD F+++ ++D+ V VNL + + +EL+ +
Sbjct: 91 LAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT----AASTLTRELIHS 146
Query: 85 ---KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFI 141
+ VG +GN GQ+NY A KAG+ F+K++A E+A+ I N I PGFI
Sbjct: 147 MMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFI 206
Query: 142 ETPMITSVPDKVKETFTRLIPLKRFGKPE 170
++ M + +K KE +IP+KR G E
Sbjct: 207 KSAMTDKLNEKQKEAIMAMIPMKRMGIGE 235
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 67/103 (65%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG +GN GQ+NY A KAG+ F+K++A E+A+ I N I PGFI++ MT + +K KE
Sbjct: 162 VGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEA 221
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+IP KR G EEI +LASD ++Y+TG + + GG+A
Sbjct: 222 IMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA 264
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 238
P ++S+ + A+ E+ ++LVN AGITRD F++++++D+ V VNL F
Sbjct: 62 PANLSDREAVK-ALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 120
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
+++ + ++ + VG GN GQ+NY A+KAG+ F+KS+A E+A+ +
Sbjct: 121 NLTRELTHPMMRRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 179
Query: 299 RCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFG 334
N I PGFIE+ MT + +K K+ IP+KR G
Sbjct: 180 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMG 215
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
P ++S+ + A+ E+ ++LVN AGITRD F++++++D+ V VNL F
Sbjct: 62 PANLSDREAVK-ALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 120
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
+++ + ++ + VG GN GQ+NY A+KAG+ F+KS+A E+A+ +
Sbjct: 121 NLTRELTHPMMRRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 179
Query: 132 RCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFG 167
N I PGFIE+ M + +K K+ IP+KR G
Sbjct: 180 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMG 215
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NY A+KAG+ F+KS+A E+A+ + N I PGFIE+ MT + +K K+
Sbjct: 145 VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQKDA 204
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
IP KR G +I + +LASD ++Y+TG + V GG+A
Sbjct: 205 IMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMA 247
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 238
P ++S+ + A+ E+ ++LVN AGITRD F++++++D+ V VNL F
Sbjct: 59 PANLSDREAVK-ALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 117
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
+++ + ++ + VG GN GQ+NY A+KAG+ F+KS+A E+A+ +
Sbjct: 118 NLTRELTHPMMRRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 176
Query: 299 RCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFG 334
N I PGFIE+ MT + +K K+ IP+KR G
Sbjct: 177 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMG 212
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
P ++S+ + A+ E+ ++LVN AGITRD F++++++D+ V VNL F
Sbjct: 59 PANLSDREAVK-ALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 117
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
+++ + ++ + VG GN GQ+NY A+KAG+ F+KS+A E+A+ +
Sbjct: 118 NLTRELTHPMMRRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNV 176
Query: 132 RCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFG 167
N I PGFIE+ M + +K K+ IP+KR G
Sbjct: 177 TVNCIAPGFIESAMTGKLNEKQKDAIMGNIPMKRMG 212
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NY A+KAG+ F+KS+A E+A+ + N I PGFIE+ MT + +K K+
Sbjct: 142 VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQKDA 201
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
IP KR G +I + +LASD ++Y+TG + V GG+A
Sbjct: 202 IMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMA 244
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
L +++S+ +I + IK + + ++LVN AGITRDN + +E ++Q V + NL
Sbjct: 59 LVLNISDIESIQNFFAEIKAE-NLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSI 117
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F S+ C K VG GN GQ+NY A KAGV F+KS+A E+A+
Sbjct: 118 FRXSKE-CVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
I NV+ PGFI T T + D+ K IP + G+P+ +
Sbjct: 177 ITVNVVAPGFIATDXTDKLTDEQKSFIATKIPSGQIGEPKDIA 219
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
L +++S+ +I + IK + + ++LVN AGITRDN + +E ++Q V + NL
Sbjct: 59 LVLNISDIESIQNFFAEIKAE-NLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSI 117
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F S+ C K VG GN GQ+NY A KAGV F+KS+A E+A+
Sbjct: 118 FRXSKE-CVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I NV+ PGFI T + D+ K IP + G+P+
Sbjct: 177 ITVNVVAPGFIATDXTDKLTDEQKSFIATKIPSGQIGEPK 216
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
VG GN GQ+NY A KAGV F+KS+A E+A+ I NV+ PGFI T T + D+ K
Sbjct: 143 VGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDXTDKLTDEQKSF 202
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP + G+P++I + FLAS+ + YITG + V GG
Sbjct: 203 IATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VL+N AGITRD F+K+T+ D+ V +L F V++ +VE +
Sbjct: 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVN 164
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
G G GQ+NYA+ KAG+ FTK++A+E A GI N + PG++ T M+ +VP V E
Sbjct: 165 -GSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEA 223
Query: 157 -FTRLIPLKRFGKPE 170
IP+ R G+P+
Sbjct: 224 KILPQIPVGRLGRPD 238
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VL+N AGITRD F+K+T+ D+ V +L F V++ +VE +
Sbjct: 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVN 164
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
G G GQ+NYA+ KAG+ FTK++A+E A GI N + PG++ T M +VP V E
Sbjct: 165 -GSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEA 223
Query: 324 -FTRLIPLKRFGKPEAVC 340
IP+ R G+P+ V
Sbjct: 224 KILPQIPVGRLGRPDEVA 241
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET- 418
G G GQ+NYA+ KAG+ FTK++A+E A GI N + PG++ T M VP V E
Sbjct: 165 GSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAK 224
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
IP R G+P+E+ +I FL SD + ++TG + + GG+
Sbjct: 225 ILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM 266
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
F +S+AV + +++ + +G GQ+NYAA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMKKRHGRIIT-----IG-----GQANYAAAKAGLIGFSKSLAREVASRG 164
Query: 298 IRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVC 340
I NV+ PGFIET D + +P R G + +
Sbjct: 165 ITVNVVAPGFIET------SDDQRAGILAQVPAGRLGGAQEIA 201
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 17/160 (10%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
F +S+AV + +++ + +G GQ+NYAA KAG+ F+KS+A E+A+ G
Sbjct: 115 FRLSKAVMRAMMKKRHGRIIT-----IG-----GQANYAAAKAGLIGFSKSLAREVASRG 164
Query: 131 IRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
I NV+ PGFIET D + +P R G +
Sbjct: 165 ITVNVVAPGFIET------SDDQRAGILAQVPAGRLGGAQ 198
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPF 425
GQ+NYAA KAG+ F+KS+A E+A+ GI NV+ PGFIET D + +P
Sbjct: 138 GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIET------SDDQRAGILAQVPA 191
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
R G +EI + FLASD ++YITG + V GG+
Sbjct: 192 GRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM 226
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 65
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 62 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 66 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 120
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 121 SVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPEGSSTHL 176
+A ++A GIR I PG TP++TS+P+KV+ +P R G P HL
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDPA-EYAHL 236
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 232
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 62 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 233 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 287
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 288 SVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
+A ++A GIR I PG TP+ TS+P+KV+ +P R G P
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQVPFPSRLGDP 230
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +P+KV+
Sbjct: 161 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVRNFLASQ 220
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 221 VPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRLDGAI 257
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
V +G G ++YAA K GV +++A+E+A G+R NV+LPG I+TPMT +P E
Sbjct: 138 VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQ 197
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P R G+PEE+ + FL S+ S+YITG + V GG
Sbjct: 198 EVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 238
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DVS+ + + E+F R V + AG+ L + +++V VNL G+FLV
Sbjct: 60 DVSDPKAVEAVFAEALEEFGRLHGV-AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV 118
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
++ + L E V +G G ++YAA K GV +++A+E+A G+R
Sbjct: 119 ARKAGEVLEEGGSLVLTGS----VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 301 NVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCK 341
NV+LPG I+TPMT +P E PL R G+PE V +
Sbjct: 175 NVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQ 215
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DVS+ + + E+F R V + AG+ L + +++V VNL G+FLV
Sbjct: 60 DVSDPKAVEAVFAEALEEFGRLHGV-AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV 118
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
++ + L E V +G G ++YAA K GV +++A+E+A G+R
Sbjct: 119 ARKAGEVLEEGGSLVLTGS----VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
NV+LPG I+TPM +P E PL R G+PE
Sbjct: 175 NVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPE 211
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
++ DVSN + + +KEKF + V VN AGI R + + +F+QV +VNL
Sbjct: 74 MAFRCDVSNYEEVKKLLEAVKEKFGKLDTV-VNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
GT+ V + L E+ V ++ S YAA+K GV + TK++A E
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGR 192
Query: 296 FGIRCNVILPGFIETPMTTSV---PDKVKETFTRLIPLKRFGKPE 337
+GIR NVI PG+ T MT +V P+K+ R IPL R G PE
Sbjct: 193 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR-IPLGRTGVPE 236
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ DVSN + + A+KEKF + V VN AGI R + + +F+QV +VNL
Sbjct: 74 MAFRCDVSNYEEVKKLLEAVKEKFGKLDTV-VNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
GT+ V + L E+ V ++ S YAA+K GV + TK++A E
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGR 192
Query: 129 FGIRCNVILPGFIETPMITSV---PDKVKETFTRLIPLKRFGKPE 170
+GIR NVI PG+ T M +V P+K+ R IPL R G PE
Sbjct: 193 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR-IPLGRTGVPE 236
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVKETFTRLIP 424
S YAA+K GV + TK++A E +GIR NVI PG+ T MT V P+K+ R IP
Sbjct: 170 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR-IP 228
Query: 425 FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G PE++ V FLAS+ + Y+TG +I V GG
Sbjct: 229 LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 65
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 64 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 66 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 120
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182
Query: 121 SVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKP 169
+A ++A GIR I PG TP++TS+P+KV +P R G P
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDP 232
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 232
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 64 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 233 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 287
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182
Query: 288 SVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
+A ++A GIR I PG TP+ TS+P+KV +P R G P
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDP 232
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +P+KV
Sbjct: 163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQ 222
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 223 VPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRLDGAI 259
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 65
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 62 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 66 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 120
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 121 SVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPEGSSTHL 176
+A ++A GIR I PG TP++TS+P+KV +P R G P HL
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPA-EYAHL 236
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--RDNWFLK----LTEKDFQQVFDV 232
P DV++ + TA++ K KF R +V VNCAGI + LK T +DFQ+V DV
Sbjct: 62 PADVTSEKDVQTALALAKGKFGRV-DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 233 NLKGTFLVSQAVCKELVETK-----XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 287
NL GTF V + V E+ + + G +GQ+ Y+A+K G+ T
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 180
Query: 288 SVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
+A ++A GIR I PG TP+ TS+P+KV +P R G P
Sbjct: 181 PIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDP 230
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +P+KV
Sbjct: 161 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQ 220
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 221 VPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRLDGAI 257
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 163 LKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLT 222
LKR G + +L +DV+ + + + E ++LVN AGITRD +
Sbjct: 252 LKRVADKVGGT---ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMD 308
Query: 223 EKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXX---XXXVGQMGNMGQSNYAATK 279
EK + V VNL L Q + + LV G GN GQ+NYA TK
Sbjct: 309 EKRWDAVIAVNL----LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK 364
Query: 280 AGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAV 339
AG+ +++A +A GI N + PGFIET MT ++P +E RL L + G+P V
Sbjct: 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDV 424
Query: 340 CK 341
+
Sbjct: 425 AE 426
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + + + E ++LVN AGITRD + EK + V VNL
Sbjct: 263 ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNL-- 320
Query: 70 TFLVSQAVCKELVETKXXXXXXXX---XXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 126
L Q + + LV G GN GQ+NYA TKAG+ +++A +
Sbjct: 321 --LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVL 378
Query: 127 ATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
A GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 379 ADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQP 421
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ +++A +A GI N + PGFIET MT +P +E
Sbjct: 350 GIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVG 409
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E+I + AS S+ +TG I+V G
Sbjct: 410 RRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCG 448
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 255 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 314
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 315 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 373
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
GI N + PGFIET MT ++P +E RL L + G+P V + +
Sbjct: 374 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAI 420
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ T+++A +A GI N + PGFIET MT +P +E
Sbjct: 342 GIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVG 401
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E I + AS S+ +TG +I+V G
Sbjct: 402 RRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCG 440
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 255 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 314
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 315 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 373
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 374 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQP 413
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP-MTTCVPDKVKETFTRLIPFKRF 428
YA TKA +E T+ VA + G+RCN I PG + TP + +P + + F R
Sbjct: 159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRI 218
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+P EI E++CFLASDR+++ITG +I GL
Sbjct: 219 GEPHEIAELVCFLASDRAAFITGQVIAADSGL 250
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLKGTF 238
+D++N ++ + + F R V N A D ++T + F VN +GT
Sbjct: 64 VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
L+ + L+ +M + YA TKA +E T+ VA + G+
Sbjct: 124 LMCKYAIPRLISAGGGAIVNISSATAHAAYDM-STAYACTKAAIETLTRYVATQYGRHGV 182
Query: 299 RCNVILPGFIETP-MTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
RCN I PG + TP + +P + + F R G+P + ELV
Sbjct: 183 RCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEI-AELV 228
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLKGTF 71
+D++N ++ + + F R V N A D ++T + F VN +GT
Sbjct: 64 VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
L+ + L+ +M + YA TKA +E T+ VA + G+
Sbjct: 124 LMCKYAIPRLISAGGGAIVNISSATAHAAYDM-STAYACTKAAIETLTRYVATQYGRHGV 182
Query: 132 RCNVILPGFIETPMI-TSVPDKVKETFTRLIPLKRFGKPE 170
RCN I PG + TP + +P + + F R G+P
Sbjct: 183 RCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPH 222
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 247 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 306
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 307 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 365
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
GI N + PGFIET MT ++P +E RL L + G+P V + +
Sbjct: 366 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAI 412
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ T+++A +A GI N + PGFIET MT +P +E
Sbjct: 334 GIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVG 393
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E I + AS S+ +TG +I+V G
Sbjct: 394 RRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCG 432
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 247 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 306
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 307 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 365
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 366 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQP 405
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 263 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 322
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 323 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 381
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
GI N + PGFIET MT ++P +E RL L + G+P V + +
Sbjct: 382 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAI 428
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ T+++A +A GI N + PGFIET MT +P +E
Sbjct: 350 GIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVG 409
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E I + AS S+ +TG +I+V G
Sbjct: 410 RRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCG 448
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 263 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 322
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 323 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 381
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 382 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQP 421
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 271 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 330
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 331 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 389
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
GI N + PGFIET MT ++P +E RL L + G+P V + +
Sbjct: 390 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAI 436
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ T+++A +A GI N + PGFIET MT +P +E
Sbjct: 358 GIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVG 417
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E I + AS S+ +TG +I+V G
Sbjct: 418 RRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCG 456
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 271 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 330
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 331 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 389
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 390 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQP 429
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 284 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 343
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 344 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 402
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
GI N + PGFIET MT ++P +E RL L + G+P V + +
Sbjct: 403 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQPVDVAEAI 449
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA TKAG+ T+++A +A GI N + PGFIET MT +P +E
Sbjct: 371 GIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVG 430
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
RL + G+P ++ E I + AS S+ +TG +I+V G
Sbjct: 431 RRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCG 469
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV+ + +++ ++LVN AGITRD + + + V VNL
Sbjct: 284 ALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLA 343
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++ + G GN GQ+NYA TKAG+ T+++A +A
Sbjct: 344 PLRLTEGLVGN-GSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 402
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
GI N + PGFIET M ++P +E RL L + G+P
Sbjct: 403 GITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQP 442
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 18/179 (10%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 63
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 61 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 117
Query: 64 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 118 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 177
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPEGSSTHL 176
T +A ++A GIR I PG TP++T++PDKV+ +P R G P HL
Sbjct: 178 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDP-AEYAHL 235
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 230
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 61 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 117
Query: 231 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 285
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 118 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 177
Query: 286 TKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
T +A ++A GIR I PG TP+ T++PDKV+ +P R G P
Sbjct: 178 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDP 229
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +PDKV+
Sbjct: 160 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQ 219
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 220 VPFPSRLGDPAEYAHLVQMVIEN--PFLNGEVIRLDGAI 256
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 18/179 (10%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 63
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 118
Query: 64 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPEGSSTHL 176
T +A ++A GIR I PG TP++T++PDKV+ +P R G P HL
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDP-AEYAHL 236
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 230
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 118
Query: 231 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 285
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 286 TKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
T +A ++A GIR I PG TP+ T++PDKV+ +P R G P
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDP 230
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +PDKV+
Sbjct: 161 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQ 220
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 221 VPFPSRLGDPAEYAHLVQMVIEN--PFLNGEVIRLDGAI 257
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G MGN GQ NY+A KAG+ TK++A+E+A I N I PG I+T M +KE
Sbjct: 167 GVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAM 226
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ +IP KR G+ EE+ + +L SD + Y+T +I + GG+
Sbjct: 227 S-MIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM 266
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 39 LVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVG 98
+V+ AGI RD F L+ D+ V NL + V Q ++ + G
Sbjct: 108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSG 167
Query: 99 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFT 158
MGN GQ NY+A KAG+ TK++A+E+A I N I PG I+T MI +KE +
Sbjct: 168 VMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMS 227
Query: 159 RLIPLKRFGKPE 170
+IP+KR G+ E
Sbjct: 228 -MIPMKRMGQAE 238
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 206 LVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVG 265
+V+ AGI RD F L+ D+ V NL + V Q ++ + G
Sbjct: 108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSG 167
Query: 266 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFT 325
MGN GQ NY+A KAG+ TK++A+E+A I N I PG I+T M +KE +
Sbjct: 168 VMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMS 227
Query: 326 RLIPLKRFGKPEAVC 340
+IP+KR G+ E V
Sbjct: 228 -MIPMKRMGQAEEVA 241
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 63
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 118
Query: 64 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPEGSSTHL 176
T +A ++A GIR I PG TP++T++PD V+ +P R G P HL
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVPFPSRLGDP-AEYAHL 236
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 230
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEVQAALTLAKEKFGRI-DVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 118
Query: 231 DVNLKGTFLVSQAVC-----KELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 285
+VNL GTF V + V E + G +GQ+ Y+A+K G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 286 TKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKP 336
T +A ++A GIR I PG TP+ T++PD V+ +P R G P
Sbjct: 179 TLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQVPFPSRLGDP 230
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K G+ T +A ++A GIR I PG TP+ T +PD V+
Sbjct: 161 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDTVRNFLASQ 220
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G P E ++ + + ++ G +I++ G +
Sbjct: 221 VPFPSRLGDPAEYAHLVQMVIEN--PFLNGEVIRLDGAI 257
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 359 VGQMGNMG-QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV------ 411
VG + +G QS YAA K GV T++ A+E +GIR N I PG I TPM
Sbjct: 153 VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP 212
Query: 412 --PDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P K E F ++ P KR+G+ EI V+ FL SD +SY+ T++ + GG
Sbjct: 213 ENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNL 67
L+ DVS+ + + ++A E+F R N AGI + N T +F +V +NL
Sbjct: 67 LTTVADVSDEAQVEAYVTATTERFGRIDGFF-NNAGIEGKQNPTESFTAAEFDKVVSINL 125
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMG-QSNYAATKAGVEAFTKSVAMEM 126
+G FL + V K + E VG + +G QS YAA K GV T++ A+E
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTAS--VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEY 183
Query: 127 ATFGIRCNVILPGFIETPMITSV--------PDKVKETFTRLIPLKRFGK-PE 170
+GIR N I PG I TPM+ + P K E F ++ P KR+G+ PE
Sbjct: 184 GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE 236
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNL 234
L+ DVS+ + + ++ E+F R N AGI + N T +F +V +NL
Sbjct: 67 LTTVADVSDEAQVEAYVTATTERFGRIDGFF-NNAGIEGKQNPTESFTAAEFDKVVSINL 125
Query: 235 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMG-QSNYAATKAGVEAFTKSVAMEM 293
+G FL + V K + E VG + +G QS YAA K GV T++ A+E
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTAS--VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEY 183
Query: 294 ATFGIRCNVILPGFIETPMTTSV--------PDKVKETFTRLIPLKRFGK-PE 337
+GIR N I PG I TPM + P K E F ++ P KR+G+ PE
Sbjct: 184 GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE 236
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++T + A++ E+F P +LVN AG L + + V D NL G F V
Sbjct: 81 DVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRV 139
Query: 241 SQAVCKEL-VETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
++ V + + G+ G M + Y A+K GV FTKSV E+A GI
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199
Query: 300 CNVILPGFIETPMTTSVPD-----------KVKETFTRLIPLKRFGKPEAVC 340
N + PG++ETPM V + +V E F IPL R+ PE V
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA 251
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++T + A++A E+F P +LVN AG L + + V D NL G F V
Sbjct: 81 DVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRV 139
Query: 74 SQAVCKEL-VETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
++ V + + G+ G M + Y A+K GV FTKSV E+A GI
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199
Query: 133 CNVILPGFIETPMITSVPD-----------KVKETFTRLIPLKRFGKPE 170
N + PG++ETPM V + +V E F IPL R+ PE
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE 248
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD------ 413
G+ G M + Y A+K GV FTKSV E+A GI N + PG++ETPM V +
Sbjct: 165 GKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHW 224
Query: 414 -----KVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+V E F IP R+ PEE+ ++ +L +D ++ IT + V GGL
Sbjct: 225 GVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG 277
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC--VPDKVKETFTRLIPFK 426
+YAA+KA ++ FT +A E+A GIR N + PG IET + +PD+ +E +P +
Sbjct: 180 DYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQ 238
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G PEE+ + I +L S +SY+TG+++ V+GG
Sbjct: 239 RAGXPEEVADAILYLLSPSASYVTGSILNVSGG 271
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 170 EGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 229
E +++P DV N + I+ S + +F R LVN AGI ++ ++ E +++
Sbjct: 73 ESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDG-LVNNAGIV--DYPQRVDEXSVERI 129
Query: 230 ---FDVNLKGTFLVSQAVCKEL--VETKXXXXXXXXXXXVGQMGNMGQS-NYAATKAGVE 283
VN+ G+ L + + + + +G+ Q +YAA+KA ++
Sbjct: 130 ERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAID 189
Query: 284 AFTKSVAMEMATFGIRCNVILPGFIETPMTTS--VPDKVKETFTRLIPLKRFGKPEAVCK 341
FT +A E+A GIR N + PG IET + S +PD+ +E +P +R G PE V
Sbjct: 190 TFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAGXPEEVAD 248
Query: 342 ELV 344
++
Sbjct: 249 AIL 251
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV---FDV 65
+++P DV N + I+ SA+ +F R LVN AGI ++ ++ E +++ V
Sbjct: 79 VAIPGDVGNAADIAAXFSAVDRQFGRLDG-LVNNAGIV--DYPQRVDEXSVERIERXLRV 135
Query: 66 NLKGTFLVSQAVCKEL--VETKXXXXXXXXXXXVGQMGNMGQS-NYAATKAGVEAFTKSV 122
N+ G+ L + + + + +G+ Q +YAA+KA ++ FT +
Sbjct: 136 NVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGL 195
Query: 123 AMEMATFGIRCNVILPGFIETPMITS--VPDKVKETFTRLIPLKRFGKPE 170
A E+A GIR N + PG IET + S +PD+ +E +P +R G PE
Sbjct: 196 AREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAGXPE 244
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGI-TRDNWFLKLTEKDFQQVFDVNLK 235
S+ MDV+NT ++ A+ ++ E+ R ++LV CAGI + +T+ + + D+NL
Sbjct: 66 SVVMDVTNTESVQNAVRSVHEQEGRV-DILVACAGICISEVKAEDMTDGQWLKQVDINLN 124
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNM------GQSNYAATKAGVEAFTKSV 289
G F QAV + ++E K +G M + Q+ Y A+KAGV + +S+
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVA-----IGSMSGLIVNRPQQQAAYNASKAGVHQYIRSL 179
Query: 290 AMEMATFGIRCNVILPGFIETPMTTSVPDK--VKETFTRLIPLKRFGKPEAVC 340
A E A GIR N + P +IET +T +K + + + P+ R G+P+ V
Sbjct: 180 AAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVA 232
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI-TRDNWFLKLTEKDFQQVFDVNLK 68
S+ MDV+NT ++ A+ ++ E+ R ++LV CAGI + +T+ + + D+NL
Sbjct: 66 SVVMDVTNTESVQNAVRSVHEQEGRV-DILVACAGICISEVKAEDMTDGQWLKQVDINLN 124
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNM------GQSNYAATKAGVEAFTKSV 122
G F QAV + ++E K +G M + Q+ Y A+KAGV + +S+
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVA-----IGSMSGLIVNRPQQQAAYNASKAGVHQYIRSL 179
Query: 123 AMEMATFGIRCNVILPGFIETPMITSVPDK--VKETFTRLIPLKRFGKPE 170
A E A GIR N + P +IET + +K + + + P+ R G+P+
Sbjct: 180 AAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPD 229
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK--VKETFTRLIP 424
Q+ Y A+KAGV + +S+A E A GIR N + P +IET +T +K + + + P
Sbjct: 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP 221
Query: 425 FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G+P+E+ V+ FLASD +S +TG ++ V G
Sbjct: 222 MGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG 256
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 361 QMGNMGQS-NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC--VPDKVKE 417
++G+ GQ +YAA K ++ FT +A E+AT GIR N + PG IET + +P++ ++
Sbjct: 170 RLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDIHASGGLPNRARD 229
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ +P +R G E+ E I +L D++SY TG L+ VTGG
Sbjct: 230 VAPQ-VPXQRAGTAREVAEAIVWLLGDQASYTTGALLDVTGG 270
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 10/182 (5%)
Query: 170 EGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQ 228
E L++ DV+ + T+ + R + LVN AG+ + +T + Q+
Sbjct: 72 EAGGQALAVQADVAKEREVLAXFETVDAQLGRL-SALVNNAGVVDQTTRVDGITLERLQR 130
Query: 229 VFDVNLKGTFLVSQAVCKELVETKXXXXXXX---XXXXVGQMGNMGQS-NYAATKAGVEA 284
F++N+ G+FL ++ K T+ ++G+ GQ +YAA K ++
Sbjct: 131 XFEINVFGSFLCAREAVKR-XSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDT 189
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTS--VPDKVKETFTRLIPLKRFGKPEAVCKE 342
FT +A E+AT GIR N + PG IET + S +P++ ++ + +P +R G V +
Sbjct: 190 FTLGLAKEVATEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQ-VPXQRAGTAREVAEA 248
Query: 343 LV 344
+V
Sbjct: 249 IV 250
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQVFDVNL 67
L++ DV+ + + + R + LVN AG+ + +T + Q+ F++N+
Sbjct: 78 LAVQADVAKEREVLAXFETVDAQLGRL-SALVNNAGVVDQTTRVDGITLERLQRXFEINV 136
Query: 68 KGTFLVSQAVCKELVETKXXXXXXX---XXXXVGQMGNMGQS-NYAATKAGVEAFTKSVA 123
G+FL ++ K T+ ++G+ GQ +YAA K ++ FT +A
Sbjct: 137 FGSFLCAREAVKR-XSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLA 195
Query: 124 MEMATFGIRCNVILPGFIETPMITS--VPDKVKETFTRLIPLKRFG 167
E+AT GIR N + PG IET + S +P++ ++ + +P +R G
Sbjct: 196 KEVATEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQ-VPXQRAG 240
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 164 KRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE 223
++ GK G T + DVSNT ++ + I P + L+ AG++ +LT
Sbjct: 56 EKVGKEFGVKTK-AYQCDVSNTDIVTKTIQQIDADLG-PISGLIANAGVSVVKPATELTH 113
Query: 224 KDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQM-------GNMGQSNYA 276
+DF V+DVN+ G F +AV K ++ + Q+ G++ Q Y
Sbjct: 114 EDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 173
Query: 277 ATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKP 336
++KA K +A E A+ GIR N + PG++ T T + K+++ IPL RF +P
Sbjct: 174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQP 233
Query: 337 EAVCKELV 344
E + + +
Sbjct: 234 EEMTGQAI 241
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DVSNT ++ + I P + L+ AG++ +LT +DF V+DVN+ G F
Sbjct: 72 DVSNTDIVTKTIQQIDADLG-PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNT 130
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQM-------GNMGQSNYAATKAGVEAFTKSVAMEM 126
+AV K ++ + Q+ G++ Q Y ++KA K +A E
Sbjct: 131 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW 190
Query: 127 ATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
A+ GIR N + PG++ T + K+++ IPL RF +PE
Sbjct: 191 ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPE 234
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G++ Q Y ++KA K +A E A+ GIR N + PG++ T T + K+++
Sbjct: 165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASN 224
Query: 423 IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP RF +PEE+ L SD ++Y+TG + GG
Sbjct: 225 IPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 15/232 (6%)
Query: 98 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG---IRCNVILPGFIETPMITSVPDKVK 154
GQ G++ Q A +S A+ +A G I C++ P + P+ +
Sbjct: 8 GQAGSL-QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66
Query: 155 ETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITR 214
ET RL+ + +G L+ +DV + + + ++ E+F R +V+V AG+
Sbjct: 67 ET-ARLV------EDQGRKA-LTRVLDVRDDAALRELVADGMEQFGRL-DVVVANAGVLS 117
Query: 215 DNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN 274
+LT++ + V VNL GT+ +A ++E G G +
Sbjct: 118 WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGH 177
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTR 326
Y+A+K G+ A T ++A+E+ +GIR N I P +ETPM P+ + E F R
Sbjct: 178 YSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE--PEAMMEIFAR 227
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV + + + ++ E+F R +V+V AG+ +LT++ + V VNL GT+
Sbjct: 84 LDVRDDAALRELVADGMEQFGRL-DVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWR 142
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+A ++E G G +Y+A+K G+ A T ++A+E+ +GIR
Sbjct: 143 TLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIR 202
Query: 133 CNVILPGFIETPMITSVPDKVKETFTR 159
N I P +ETPMI P+ + E F R
Sbjct: 203 VNSIHPYSVETPMIE--PEAMMEIFAR 227
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPF 425
G +Y+A+K G+ A T ++A+E+ +GIR N I P +ETPM P+ + E F R F
Sbjct: 174 GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE--PEAMMEIFARHPSF 231
Query: 426 KR-----------FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
F +E+ +V+ +LA D S +TGT I V G
Sbjct: 232 VHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 14/103 (13%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT------------TCVPDKVKE 417
Y +K + T+SVA++ A IRCN + PG I TPM V K++E
Sbjct: 153 YVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEE 211
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ R P R G+PEE+ EV+ FLASDRSS+ITG + V GGL
Sbjct: 212 -WGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV+N + A+ +K+ R ++LVN AGI + + + ++++ DVN+ G++L
Sbjct: 60 IDVTNEEEVKEAVEKTTKKYGRI-DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYL 118
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+++ ++ + Y +K + T+SVA++ A IR
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQ-SYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176
Query: 300 CNVILPGFIETPMT------------TSVPDKVKETFTRLIPLKRFGKPEAVCK 341
CN + PG I TPM +V K++E + R P+ R G+PE V +
Sbjct: 177 CNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEE-WGRQHPMGRIGRPEEVAE 229
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV+N + A+ +K+ R ++LVN AGI + + + ++++ DVN+ G++L
Sbjct: 60 IDVTNEEEVKEAVEKTTKKYGRI-DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYL 118
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+++ ++ + Y +K + T+SVA++ A IR
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQ-SYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176
Query: 133 CNVILPGFIETPMI------------TSVPDKVKETFTRLIPLKRFGKPE 170
CN + PG I TPM+ +V K++E + R P+ R G+PE
Sbjct: 177 CNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEE-WGRQHPMGRIGRPE 225
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++ I ++ I+ + ++LVN AGI R +++T F+QV D++L F+V
Sbjct: 91 DVTDEDGIQAMVAQIESEVG-IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
S+AV +++ K + ++G S YAA K G++ TK++A E I+C
Sbjct: 150 SKAVIPSMIK-KGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 208
Query: 301 NVILPGFIETPMTTSV----PDKVKETFTRLI----PLKRFGKPE 337
N I PG+I TP T + D + F + I P R+G+ E
Sbjct: 209 NGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAE 253
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++ I ++ I+ + ++LVN AGI R +++T F+QV D++L F+V
Sbjct: 91 DVTDEDGIQAMVAQIESEVG-IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
S+AV +++ K + ++G S YAA K G++ TK++A E I+C
Sbjct: 150 SKAVIPSMIK-KGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 208
Query: 134 NVILPGFIETPMITSV----PDKVKETFTRLI----PLKRFGKPE 170
N I PG+I TP + D + F + I P R+G+ E
Sbjct: 209 NGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAE 253
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 361 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV----PDKVK 416
++G S YAA K G++ TK++A E I+CN I PG+I TP T + D +
Sbjct: 174 ELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSR 233
Query: 417 ETFTRLI----PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
F + I P R+G+ E++ FLASD S+++ G ++ V GG+
Sbjct: 234 HPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHILYVDGGI 281
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI R ++ +E D+ +V DVNLK F +QA KEL+
Sbjct: 81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL 140
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-PDKVK- 321
+ G + +Y A K GV TK +A E A GI N I PG+IET T ++ D +
Sbjct: 141 LSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARN 200
Query: 322 ETFTRLIPLKRFGKPEAVCKELV 344
+ IP R+G E + V
Sbjct: 201 KAILERIPAGRWGHSEDIAGAAV 223
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 27 AIKEKFSRPP-NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETK 85
A K+ F+ ++LVN AGI R ++ +E D+ +V DVNLK F +QA KEL+
Sbjct: 70 AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG 129
Query: 86 XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIE--- 142
+ G + +Y A K GV TK +A E A GI N I PG+IE
Sbjct: 130 RSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN 189
Query: 143 TPMITSVPDKVKETFTRLIPLKRFGKPE---GSSTHLS 177
T + + + K R IP R+G E G++ LS
Sbjct: 190 TEALRADAARNKAILER-IPAGRWGHSEDIAGAAVFLS 226
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 337 EAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCN 396
+A KEL+ + G + +Y A K GV TK +A E A GI N
Sbjct: 119 QAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVN 178
Query: 397 VILPGFIETPMTTCV-PDKVK-ETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLI 454
I PG+IET T + D + + IP R+G E+I FL+S + Y+ G ++
Sbjct: 179 AIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAIL 238
Query: 455 KVTGG 459
V GG
Sbjct: 239 NVDGG 243
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRV 141
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 254
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRV 141
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 249
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 167 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 226
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 227 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 279
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 79 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRV 137
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 138 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 79 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRV 137
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 138 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 163 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 222
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 223 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 275
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 201 TVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 254
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 201 TVNAVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQP 249
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 167 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHFSDIW 226
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 227 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 279
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 254
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 249
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 167 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 226
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 227 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 279
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 79 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 137
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 138 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 79 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 137
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 138 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 163 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 222
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 223 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 275
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 63 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 121
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 122 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 180
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 181 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 229
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 63 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 121
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 122 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 180
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 181 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 234
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 147 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 206
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 207 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 259
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PGF+ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 254
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PGF+ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 201 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 249
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PGF+ETPM V +
Sbjct: 167 GKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIW 226
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 227 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 279
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G G + Y ATK V TKS A+E+ GIR N I PG ++TPMT VP+ + +T
Sbjct: 143 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQT- 201
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R +P E+ ++ +LASD SSY TG V GG
Sbjct: 202 ----ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV+ + A+ T F +VLVN AGI ++Q++ DVNL G FL
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFG-GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 118
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+AV K + E G G + Y ATK V TKS A+E+ GIR
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIE-GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
N I PG ++TPMT VP+ + +T L R +P V +V
Sbjct: 178 VNSIHPGLVKTPMTDWVPEDIFQT-----ALGRAAEPVEVSNLVV 217
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
HL + + + TA++A +VLVN AGI ++Q++ DVNL
Sbjct: 59 HLDVTQPAQWKAAVDTAVTAFGGL-----HVLVNNAGILNIGTIEDYALTEWQRILDVNL 113
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 127
G FL +AV K + E G G + Y ATK V TKS A+E+
Sbjct: 114 TGVFLGIRAVVKPMKEAGRGSIINISSIE-GLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 128 TFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP-EGSSTHLSLPMDVSNTS 186
GIR N I PG ++TPM VP+ + +T L R +P E S+ + L D S+ S
Sbjct: 173 PSGIRVNSIHPGLVKTPMTDWVPEDIFQT-----ALGRAAEPVEVSNLVVYLASDESSYS 227
Query: 187 T 187
T
Sbjct: 228 T 228
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + I ++ + E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 241 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 299 RCNVILPGFIETPMTTSVPDK--------VKETFTRL---IPLKRFGKPEAVCK 341
N + PG++ETPM SV + +E F R+ +P+ R+ +P V +
Sbjct: 201 TVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 254
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + I ++A+ E++ P +VLVN AG +L ++ + V + NL G F V
Sbjct: 83 DVRSVPEIEALVAAVVERYG-PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 141
Query: 74 SQAVCKE--LVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ V K ++E + G+ G + + Y+A+K GV FTK++ +E+A GI
Sbjct: 142 TKQVLKAGGMLE-RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 132 RCNVILPGFIETPMITSVPDK--------VKETFTRL---IPLKRFGKP 169
N + PG++ETPM SV + +E F R+ +P+ R+ +P
Sbjct: 201 TVNAVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 249
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK----- 414
G+ G + + Y+A+K GV FTK++ +E+A GI N + PG++ETPM V +
Sbjct: 167 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETPMAASVREHYSDIW 226
Query: 415 ---VKETFTRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+E F R+ +P R+ +P E+ E++ +L ++ +T + V GGL
Sbjct: 227 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 279
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV------PDKVKETFT 420
+ Y A+K G+ T+S+A+++A IR N + PG I T P++ + +
Sbjct: 146 NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE 205
Query: 421 RLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
L +R GKPEE+ E + FLAS+++S+ITG ++ V GG+
Sbjct: 206 DLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM 245
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VLVN A I L + ++++V +VNL +S +E+ +
Sbjct: 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 138
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV------P 317
G + Y A+K G+ T+S+A+++A IR N + PG I T P
Sbjct: 139 -GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDP 197
Query: 318 DKVKETFTRLIPLKRFGKPEAVCKELV 344
++ + + L L+R GKPE V + ++
Sbjct: 198 ERTRRDWEDLHALRRLGKPEEVAEAVL 224
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VLVN A I L + ++++V +VNL +S +E+ +
Sbjct: 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 138
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------P 150
G + Y A+K G+ T+S+A+++A IR N + PG I T + P
Sbjct: 139 -GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDP 197
Query: 151 DKVKETFTRLIPLKRFGKPE 170
++ + + L L+R GKPE
Sbjct: 198 ERTRRDWEDLHALRRLGKPE 217
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 170 EGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 229
+G H + DV++ I A S + + ++L+N AGI ++L +++Q+V
Sbjct: 56 KGYDAH-GVAFDVTDELAIEAAFSKLDAE-GIHVDILINNAGIQYRKPMVELELENWQKV 113
Query: 230 FDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSV 289
D NL FLVS++ K ++ Q + Y A K G++ T S+
Sbjct: 114 IDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSM 173
Query: 290 AMEMATFGIRCNVILPGFIETPMTTS-VPDKVKETFTR-LIPLKRFGKPEAVCKELVET 346
A E A F I+ N I PG+I T M T+ + DK +++ + P +R+G+PE EL+ T
Sbjct: 174 AAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPE----ELIGT 228
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G H + DV++ I A S + + ++L+N AGI ++L +++Q+V
Sbjct: 57 GYDAH-GVAFDVTDELAIEAAFSKLDAE-GIHVDILINNAGIQYRKPMVELELENWQKVI 114
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
D NL FLVS++ K ++ Q + Y A K G++ T S+A
Sbjct: 115 DTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMA 174
Query: 124 MEMATFGIRCNVILPGFIETPMITS-VPDKVKETFTR-LIPLKRFGKPE 170
E A F I+ N I PG+I T M T+ + DK +++ + P +R+G+PE
Sbjct: 175 AEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPE 223
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC-VPDKVKETFTR-LIPFKR 427
Y A K G++ T S+A E A F I+ N I PG+I T M T + DK +++ + P +R
Sbjct: 159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR 218
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+G+PEE+ FL+S S YI G +I V GG
Sbjct: 219 WGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++ V AGI L + ++FQ++ D N+ G FL +QA + +V+
Sbjct: 111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM 170
Query: 97 VGQMGNMGQ--SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVK 154
G + N+ Q S+Y +KA V TK++A+E+A IR N + PG+I T ++ + D
Sbjct: 171 SGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YH 229
Query: 155 ETFTRLIPLKRFGKPE 170
+ IPL R G+PE
Sbjct: 230 ALWEPKIPLGRMGRPE 245
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++ V AGI L + ++FQ++ D N+ G FL +QA + +V+
Sbjct: 111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM 170
Query: 264 VGQMGNMGQ--SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK 321
G + N+ Q S+Y +KA V TK++A+E+A IR N + PG+I T + + D
Sbjct: 171 SGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YH 229
Query: 322 ETFTRLIPLKRFGKPE 337
+ IPL R G+PE
Sbjct: 230 ALWEPKIPLGRMGRPE 245
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 333 FGKPEAVCKELVETKXXXXXXXXXXXVGQMGNMGQ--SNYAATKAGVEAFTKSVAMEMAT 390
F +A + +V+ G + N+ Q S+Y +KA V TK++A+E+A
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204
Query: 391 FGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYIT 450
IR N + PG+I T + + D + IP R G+PEE+ + +LAS SSY+T
Sbjct: 205 HQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMT 263
Query: 451 GTLIKVTGG 459
G+ I + GG
Sbjct: 264 GSDIVIDGG 272
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVK-E 417
V GN +Y+ATK + AFT+S++ + GIR N + PG I TP+ D+ K
Sbjct: 185 VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVS 244
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
F +P +R G+P E+ +LAS SSY+TG +I V GG+
Sbjct: 245 QFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGV 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 37 NVLVNCAGITRDNWFLK-LTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXX 95
N+LVN L+ +T + ++ F +N+ F V++A L K
Sbjct: 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTAS 183
Query: 96 XVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVK- 154
V GN +Y+ATK + AFT+S++ + GIR N + PG I TP+I S D+ K
Sbjct: 184 IVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKV 243
Query: 155 ETFTRLIPLKRFGKP 169
F +P++R G+P
Sbjct: 244 SQFGSNVPMQRPGQP 258
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 164 KRFGKPEGSSTHLSLPMDVSNTSTI-STAMSTIKEKFSRPPNVLVNCAGITRDNWFLK-L 221
K++ + EG L LP D+S+ T+++ S N+LVN L+ +
Sbjct: 89 KQYVEKEGVKCVL-LPGDLSDEQHCKDIVQETVRQLGSL--NILVNNVAQQYPQQGLEYI 145
Query: 222 TEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAG 281
T + ++ F +N+ F V++A L K V GN +Y+ATK
Sbjct: 146 TAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTASIVAYEGNETLIDYSATKGA 202
Query: 282 VEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK-ETFTRLIPLKRFGKP 336
+ AFT+S++ + GIR N + PG I TP+ S D+ K F +P++R G+P
Sbjct: 203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQP 258
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
MDV++ + ++ + + R + LVN AGI R +L+++D+QQ F VN+ G F
Sbjct: 53 MDVADAAQVAQVCQRLLAETERL-DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+ Q + + +G S Y A+KA +++ SV +E+A G+R
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAA-HTPRIGMSAYGASKAALKSLALSVGLELAGSGVR 170
Query: 300 CNVILPGFIETPM--TTSVPDKVK--------ETFTRLIPLKRFGKPEAVCKELV 344
CNV+ PG +T M T V D + E F IPL + +P+ + ++
Sbjct: 171 CNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM--TTCVPDKVK------ 416
+G S Y A+KA +++ SV +E+A G+RCNV+ PG +T M T V D +
Sbjct: 141 IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRG 200
Query: 417 --ETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
E F IP + +P+EI I FLASD +S+IT I V GG
Sbjct: 201 FGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGG 245
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
MDV++ + ++ + + R + LVN AGI R +L+++D+QQ F VN+ G F
Sbjct: 53 MDVADAAQVAQVCQRLLAETERL-DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+ Q + + +G S Y A+KA +++ SV +E+A G+R
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAA-HTPRIGMSAYGASKAALKSLALSVGLELAGSGVR 170
Query: 133 CNVILPGFIETPMITS--VPDKVK--------ETFTRLIPLKRFGKP-EGSSTHLSLPMD 181
CNV+ PG +T M + V D + E F IPL + +P E ++T L L D
Sbjct: 171 CNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASD 230
Query: 182 VSNTSTI 188
+++ T+
Sbjct: 231 LASHITL 237
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVK--ETFTRLIPF 425
S+Y A+K V T+++A E A G+R N + PG++ T MT + ++ + ET+ + P
Sbjct: 157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM 216
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G+P EI FLAS +SY+TG ++ V GG
Sbjct: 217 GRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 261
P ++LVN AGI R + L+ + ++QV VN+ G F S+A + +V +
Sbjct: 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMV-ARGAGAIVNLG 143
Query: 262 XXVGQMGNMGQ--SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDK 319
G + N Q S+Y A+K V T+++A E A G+R N + PG++ T MT + ++
Sbjct: 144 SMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER 203
Query: 320 VK--ETFTRLIPLKRFGKPEAVC 340
+ ET+ + P+ R G+P +
Sbjct: 204 PELFETWLDMTPMGRCGEPSEIA 226
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 94
P ++LVN AGI R + L+ + ++QV VN+ G F S+A + +V +
Sbjct: 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMV-ARGAGAIVNLG 143
Query: 95 XXVGQMGNMGQ--SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDK 152
G + N Q S+Y A+K V T+++A E A G+R N + PG++ T M + ++
Sbjct: 144 SMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER 203
Query: 153 VK--ETFTRLIPLKRFGKP 169
+ ET+ + P+ R G+P
Sbjct: 204 PELFETWLDMTPMGRCGEP 222
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-----------CVPDKVK 416
++Y+A+K V +T+++A EMA IR N + PGF++T M P+ V+
Sbjct: 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVR 216
Query: 417 ETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ L P R +PE++ +V+ FLASD + ++TG I VTGG+
Sbjct: 217 AEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV 260
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
++ +DV+ +++ AM + ++L AG++ + +T++++ FDVN +
Sbjct: 61 FAVEVDVTKRASVDAAMQKAIDALG-GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR 119
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G FL +Q C+ + + ++G ++Y+A+K V +T+++A EMA
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAP 179
Query: 296 FGIRCNVILPGFIETPMTTS-----------VPDKVKETFTRLIPLKRFGKPEAVCKELV 344
IR N + PGF++T M P+ V+ + L PL R +PE V +V
Sbjct: 180 KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV 239
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ +DV+ +++ AM + ++L AG++ + +T++++ FDVN +
Sbjct: 61 FAVEVDVTKRASVDAAMQKAIDALG-GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR 119
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G FL +Q C+ + + ++G ++Y+A+K V +T+++A EMA
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAP 179
Query: 129 FGIRCNVILPGFIETPMITS-----------VPDKVKETFTRLIPLKRFGKPE 170
IR N + PGF++T M P+ V+ + L PL R +PE
Sbjct: 180 KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPE 232
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G G + Y ATK V TKS A+E+ GIR N I PG ++TP T VP+ + +T
Sbjct: 143 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPXTDWVPEDIFQT- 201
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R +P E+ ++ +LASD SSY TG V GG
Sbjct: 202 ----ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV+ + A+ T F +VLVN AGI ++Q++ DVNL G FL
Sbjct: 60 LDVTQPAQWKAAVDTAVTAFG-GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFL 118
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+AV K E G G + Y ATK V TKS A+E+ GIR
Sbjct: 119 GIRAVVKPXKEAGRGSIINISSIE-GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
N I PG ++TP T VP+ + +T L R +P V +V
Sbjct: 178 VNSIHPGLVKTPXTDWVPEDIFQT-----ALGRAAEPVEVSNLVV 217
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
HL + + + TA++A +VLVN AGI ++Q++ DVNL
Sbjct: 59 HLDVTQPAQWKAAVDTAVTAFGGL-----HVLVNNAGILNIGTIEDYALTEWQRILDVNL 113
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 127
G FL +AV K E G G + Y ATK V TKS A+E+
Sbjct: 114 TGVFLGIRAVVKPXKEAGRGSIINISSIE-GLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 128 TFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP-EGSSTHLSLPMDVSNTS 186
GIR N I PG ++TP VP+ + +T L R +P E S+ + L D S+ S
Sbjct: 173 PSGIRVNSIHPGLVKTPXTDWVPEDIFQT-----ALGRAAEPVEVSNLVVYLASDESSYS 227
Query: 187 T 187
T
Sbjct: 228 T 228
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDN--WFLKLTE-KDFQQVFDV 232
L + DV++ ++ A++ E+F +VLVN AGIT ++ L T + F +V V
Sbjct: 55 LRVRADVADEGDVNAAIAATMEQFG-AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113
Query: 233 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 292
N++G FL +AV ++ + + G+S Y +K V TKSVA++
Sbjct: 114 NVRGIFLGCRAVLPHML-LQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVD 172
Query: 293 MATFGIRCNVILPGFIETPMTTSVPDK--VKETFTRLIPLKRFGKPEAVCKELV 344
A GIRCN + PG IETPMT D+ +++ IP K G V ++
Sbjct: 173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVM 226
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN--WFLKLTE-KDFQQVFDV 65
L + DV++ ++ A++A E+F +VLVN AGIT ++ L T + F +V V
Sbjct: 55 LRVRADVADEGDVNAAIAATMEQFG-AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113
Query: 66 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 125
N++G FL +AV ++ + + G+S Y +K V TKSVA++
Sbjct: 114 NVRGIFLGCRAVLPHML-LQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVD 172
Query: 126 MATFGIRCNVILPGFIETPMITSVPDK--VKETFTRLIPLKRFG 167
A GIRCN + PG IETPM D+ +++ IP K G
Sbjct: 173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIG 216
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK--VKETFTRLI 423
G+S Y +K V TKSVA++ A GIRCN + PG IETPMT D+ +++ I
Sbjct: 151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI 210
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
P K G ++ + + FLA + ++Y+ G + + G
Sbjct: 211 PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG 245
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V++N AGI RD K+TEKD++ V DV+L G F V++A + K
Sbjct: 93 HVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSP 151
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV 316
G GN GQ+NYA+ K+ + F +++A E A + I+ N I P + MT S+
Sbjct: 152 AGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP-LARSRMTESI 203
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI RD F K++++++ V V+L GTF +S+ VE K
Sbjct: 397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE-KQFGRIINITST 455
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV 316
G GN GQ+NY+++KAG+ +K++A+E A I+ N++ P ET MT S+
Sbjct: 456 SGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-HAETAMTLSI 507
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+V++N AGI RD K+TEKD++ V DV+L G F V++A + K
Sbjct: 93 HVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSP 151
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILP 138
G GN GQ+NYA+ K+ + F +++A E A + I+ N I P
Sbjct: 152 AGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP 193
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI RD F K++++++ V V+L GTF +S+ VE K
Sbjct: 397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE-KQFGRIINITST 455
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV 149
G GN GQ+NY+++KAG+ +K++A+E A I+ N++ P ET M S+
Sbjct: 456 SGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-HAETAMTLSI 507
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NY+++KAG+ +K++A+E A I+ N++ P ET MT + ++E
Sbjct: 457 GIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-HAETAMTLSI---MREQD 512
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
L +++ ++ +L +D +TG ++ GG
Sbjct: 513 KNLY------HADQVAPLLVYLGTDDVP-VTGETFEIGGG 545
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ+NYA+ K+ + F +++A E A + I+ N I P + MT +
Sbjct: 153 GLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP-LARSRMTESI-------- 203
Query: 420 TRLIP---FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P ++ G PE++ ++ +L+S + +TG +V G
Sbjct: 204 ---MPPPMLEKLG-PEKVAPLVLYLSSAENE-LTGQFFEVAAGF 242
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV-PDKVKETFTRLIPFK 426
S Y+ATK + +++A E A+ GIR N + P I TP+ V D+ K+ P
Sbjct: 162 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLG 221
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
RFG+PEE+ ++ FL +SYITG I V GGL
Sbjct: 222 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL 255
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 192 MSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 251
M T+ F ++L+N G R L T +DF NL+ + +SQ + L++
Sbjct: 82 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQ-LAHPLLKA 140
Query: 252 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 311
G + S Y+ATK + +++A E A+ GIR N + P I TP
Sbjct: 141 SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 200
Query: 312 MTTSV-PDKVKETFTRLIPLKRFGKPEAV 339
+ +V D+ K+ PL RFG+PE V
Sbjct: 201 LAEAVYDDEFKKVVISRKPLGRFGEPEEV 229
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 25 MSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 84
M + F ++L+N G R L T +DF NL+ + +SQ + L++
Sbjct: 82 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQ-LAHPLLKA 140
Query: 85 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 144
G + S Y+ATK + +++A E A+ GIR N + P I TP
Sbjct: 141 SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 200
Query: 145 MITSV-PDKVKETFTRLIPLKRFGKPE 170
+ +V D+ K+ PL RFG+PE
Sbjct: 201 LAEAVYDDEFKKVVISRKPLGRFGEPE 227
>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|B Chain B, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|C Chain C, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|D Chain D, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET 418
G G +GQ+ YAA KAGV T + A ++++ GIR N I PG ++TP+ V ++
Sbjct: 176 AGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAK 235
Query: 419 FTRLIPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTG 458
F IPF KR G P+E + FL ++ YI G ++++ G
Sbjct: 236 FAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDG 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 59 FQQVFDVNLKGTFLVSQAVCKELV-----ETKXXXXXXXXXXXVGQMGNMGQSNYAATKA 113
F + D+ L GT+ V++ V + E G G +GQ+ YAA KA
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKA 192
Query: 114 GVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPE 170
GV T + A ++++ GIR N I PG ++TP++ SV ++ F IP KR G P+
Sbjct: 193 GVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPD 250
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 226 FQQVFDVNLKGTFLVSQAVCKELV-----ETKXXXXXXXXXXXVGQMGNMGQSNYAATKA 280
F + D+ L GT+ V++ V + E G G +GQ+ YAA KA
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKA 192
Query: 281 GVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKPE 337
GV T + A ++++ GIR N I PG ++TP+ SV ++ F IP KR G P+
Sbjct: 193 GVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPD 250
>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
pdb|1UAY|B Chain B, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
Length = 242
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ YAA+K GV A T A E+A +GIR + PG +TP+ +P+K K +
Sbjct: 141 GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ 200
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G+PEE ++ + + + G ++++ G L
Sbjct: 201 VPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGAL 237
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE----KDFQQVFDVNLKG 69
DV+ + A++ +E+ P +V+ AG+ L + F++V +VNL G
Sbjct: 47 DVTREEDVRRAVARAQEEA--PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLG 104
Query: 70 TF----LVSQAVCKELVETKXXXXXXXXXXXVGQM-GNMGQSNYAATKAGVEAFTKSVAM 124
TF L + A+ + + + V G +GQ+ YAA+K GV A T A
Sbjct: 105 TFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAR 164
Query: 125 EMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPE 170
E+A +GIR + PG +TP++ +P+K K + +P R G+PE
Sbjct: 165 ELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE 211
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE----KDFQQVFDVNLKG 236
DV+ + A++ +E+ P +V+ AG+ L + F++V +VNL G
Sbjct: 47 DVTREEDVRRAVARAQEEA--PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLG 104
Query: 237 TF----LVSQAVCKELVETKXXXXXXXXXXXVGQM-GNMGQSNYAATKAGVEAFTKSVAM 291
TF L + A+ + + + V G +GQ+ YAA+K GV A T A
Sbjct: 105 TFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAR 164
Query: 292 EMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKPE 337
E+A +GIR + PG +TP+ +P+K K + +P R G+PE
Sbjct: 165 ELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE 211
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVK-E 417
V GN +Y+ATK + AFT+S++ + GIR N + PG I TP+ D+ K
Sbjct: 185 VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVS 244
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
F +P +R G+P E+ +LAS SSY+TG I V GG+
Sbjct: 245 QFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXIHVNGGV 287
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 37 NVLVNCAGITRDNWFLK-LTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXX 95
N+LVN L+ +T + ++ F +N+ F V++A L K
Sbjct: 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTAS 183
Query: 96 XVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVK- 154
V GN +Y+ATK + AFT+S++ + GIR N + PG I TP+I S D+ K
Sbjct: 184 IVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKV 243
Query: 155 ETFTRLIPLKRFGKP 169
F +P +R G+P
Sbjct: 244 SQFGSNVPXQRPGQP 258
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 164 KRFGKPEGSSTHLSLPMDVSNTSTI-STAMSTIKEKFSRPPNVLVNCAGITRDNWFLK-L 221
K++ + EG L LP D+S+ T+++ S N+LVN L+ +
Sbjct: 89 KQYVEKEGVKCVL-LPGDLSDEQHCKDIVQETVRQLGSL--NILVNNVAQQYPQQGLEYI 145
Query: 222 TEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAG 281
T + ++ F +N+ F V++A L K V GN +Y+ATK
Sbjct: 146 TAEQLEKTFRINIFSYFHVTKAALSHL---KQGDVIINTASIVAYEGNETLIDYSATKGA 202
Query: 282 VEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK-ETFTRLIPLKRFGKP 336
+ AFT+S++ + GIR N + PG I TP+ S D+ K F +P +R G+P
Sbjct: 203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQP 258
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-TCVPDKVKET--- 418
G G + YAA+KAG+ +++A+E+ GIR N +LPG +TP +P ET
Sbjct: 152 GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF 211
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
L KR +PEEI E +LASD +S++TG + GG
Sbjct: 212 VEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGG 252
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 221 LTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKA 280
L+ + +++ D NL FL ++ + G G + YAA+KA
Sbjct: 105 LSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKA 164
Query: 281 GVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-TSVPDKVKET---FTRLIPLKRFGKP 336
G+ +++A+E+ GIR N +LPG +TP ++P ET L LKR +P
Sbjct: 165 GLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARP 224
Query: 337 EAVCK 341
E + +
Sbjct: 225 EEIAE 229
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 54 LTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKA 113
L+ + +++ D NL FL ++ + G G + YAA+KA
Sbjct: 105 LSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKA 164
Query: 114 GVEAFTKSVAMEMATFGIRCNVILPGFIETPM-ITSVPDKVKET---FTRLIPLKRFGKP 169
G+ +++A+E+ GIR N +LPG +TP ++P ET L LKR +P
Sbjct: 165 GLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARP 224
Query: 170 E 170
E
Sbjct: 225 E 225
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 182 VSNTSTISTAMSTIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 238
V+N ++ +K + F R +V+VN AGI RD F +++++D+ + V+L+G+F
Sbjct: 91 VANYDSVEEGEKVVKTALDAFGRI-DVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSF 149
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
V++A + + + K G GN GQ+NY+A K G+ S+A+E I
Sbjct: 150 QVTRAAWEHMKKQKYGRIIMTSSAS-GIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNI 208
Query: 299 RCNVILPGFIETPMTTSVPDKVKETF 324
CN I P T +P+ + E
Sbjct: 209 HCNTIAPNAGSRMTQTVMPEDLVEAL 234
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 15 VSNTSTISTAMSAIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
V+N ++ +K + F R +V+VN AGI RD F +++++D+ + V+L+G+F
Sbjct: 91 VANYDSVEEGEKVVKTALDAFGRI-DVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSF 149
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
V++A + + + K G GN GQ+NY+A K G+ S+A+E I
Sbjct: 150 QVTRAAWEHMKKQKYGRIIMTSSAS-GIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNI 208
Query: 132 RCNVILPGFIETPMITSVPDKVKETF 157
CN I P T +P+ + E
Sbjct: 209 HCNTIAPNAGSRMTQTVMPEDLVEAL 234
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 15/181 (8%)
Query: 282 VEAFTKSVAMEMATFGIRCNVIL--PGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAV 339
VE K V + FG R +V++ G + + D+ + R+ F A
Sbjct: 97 VEEGEKVVKTALDAFG-RIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAA 155
Query: 340 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 399
+ + + K G GN GQ+NY+A K G+ S+A+E I CN I
Sbjct: 156 WEHMKKQKYGRIIMTSSAS-GIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIA 214
Query: 400 PGFIETPMTTCVPDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P T +P+ + E KPE + ++ +L + S G L +V G
Sbjct: 215 PNAGSRMTQTVMPEDLVEAL----------KPEYVAPLVLWLCHE-SCEENGGLFEVGAG 263
Query: 460 L 460
Sbjct: 264 W 264
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT---CVPDKVKETFTRLIPF 425
+YAA+K G++ TK++A+E A GIR N I PG I TP+ P++ + +IP
Sbjct: 157 HYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQ-RADVESMIPM 215
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+PEEI V +LAS +SY+TG + GG+
Sbjct: 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 185 TSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 244
+ I+ S IKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 245 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 304
K VE ++ +YAA+K G++ TK++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIG 187
Query: 305 PGFIETPMTT---SVPDKVKETFTRLIPLKRFGKPEAVC 340
PG I TP+ + P++ + +IP+ G+PE +
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPEEIA 225
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 77
+ I+ SAIKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 78 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 137
K VE ++ +YAA+K G++ TK++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIG 187
Query: 138 PGFIETPMIT---SVPDKVKETFTRLIPLKRFGKPE 170
PG I TP+ + P++ + +IP+ G+PE
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPE 222
>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|B Chain B, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|C Chain C, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|D Chain D, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
Length = 289
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A+ IR N + PG P +P V+E + R +P
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDD--MPFSVQEDYRRKVP 247
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
++R EE+ +V+ FL S ++ YITGT IKV GG +
Sbjct: 248 LYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A+ IR N + PG P +P V+E + R +P
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLP--DDMPFSVQEDYRRKVP 247
Query: 163 L 163
L
Sbjct: 248 L 248
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A+ IR N + PG P +P V+E + R +P
Sbjct: 190 LGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLP--DDMPFSVQEDYRRKVP 247
Query: 330 L 330
L
Sbjct: 248 L 248
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFL---KLTEKDFQQVFDV 232
L++ DV NT I + I EKF R ++ N AG N+ L+ + V ++
Sbjct: 58 LTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAG----NFICPAEDLSVNGWNSVINI 113
Query: 233 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 292
L GTF SQA+ K +E G + AA KAGV A TK++A+E
Sbjct: 114 VLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVE 173
Query: 293 MA-TFGIRCNVILPGFIETPMTTSVPDKV---KETFTRLI---PLKRFGKPEAVC 340
+GIR N I PG IE T DK+ +E R I PL R G PE +
Sbjct: 174 WGRKYGIRVNAIAPGPIE---RTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIA 225
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL---KLTEKDFQQVFDV 65
L++ DV NT I + I EKF R ++ N AG N+ L+ + V ++
Sbjct: 58 LTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAG----NFICPAEDLSVNGWNSVINI 113
Query: 66 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 125
L GTF SQA+ K +E G + AA KAGV A TK++A+E
Sbjct: 114 VLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVE 173
Query: 126 MA-TFGIRCNVILPGFIETPMITSVPDKV---KETFTRLI---PLKRFGKPE 170
+GIR N I PG IE T DK+ +E R I PL R G PE
Sbjct: 174 WGRKYGIRVNAIAPGPIER---TGGADKLWISEEXAKRTIQSVPLGRLGTPE 222
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVPDKV---KETFTRLI--- 423
AA KAGV A TK++A+E +GIR N I PG IE T DK+ +E R I
Sbjct: 157 AAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIER---TGGADKLWISEEXAKRTIQSV 213
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P R G PEEI + +L SD ++YI GT GG
Sbjct: 214 PLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGG 249
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-------TCV 411
+G N Q++Y ++K GV TK A ++ +GI N + PG IETPMT T
Sbjct: 160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMR 219
Query: 412 PD-------KVKETFTRL-IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
PD V+ F L + + F KPEE+ + FL + SS+ITGT++ + G
Sbjct: 220 PDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++ + AGI+ ++ + +V NL GTF AV +++ +
Sbjct: 101 DIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK-RNYGRIVTVSSM 159
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-------TSV 316
+G N Q++Y ++K GV TK A ++ +GI N + PG IETPMT T
Sbjct: 160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMR 219
Query: 317 PD-------KVKETFTRL-IPLKRFGKPEAVCKELV 344
PD V+ F L + F KPE V + ++
Sbjct: 220 PDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVL 255
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++ + AGI+ ++ + +V NL GTF AV +++ +
Sbjct: 101 DIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK-RNYGRIVTVSSM 159
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 145
+G N Q++Y ++K GV TK A ++ +GI N + PG IETPM
Sbjct: 160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAG-------ITRDNWFLKLTEKDFQQVFDVN 66
DV++ + +++A+ + + ++VNCAG ++RD F + F+++ D+N
Sbjct: 60 DVTDEAAVASALDLAETMGTL--RIVVNCAGTGNAIRVLSRDGVF---SLAAFRKIVDIN 114
Query: 67 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQM-------GNMGQSNYAATKAGVEAFT 119
L G+F V + + + +T+ + G +GQ+ Y+A+K GV T
Sbjct: 115 LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMT 174
Query: 120 KSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPE 170
+A ++A+ IR I PG +TP++ S+P++ + + + +P R G P+
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPD 226
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAG-------ITRDNWFLKLTEKDFQQVFDVN 233
DV++ + +++A+ + + ++VNCAG ++RD F + F+++ D+N
Sbjct: 60 DVTDEAAVASALDLAETMGTL--RIVVNCAGTGNAIRVLSRDGVF---SLAAFRKIVDIN 114
Query: 234 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQM-------GNMGQSNYAATKAGVEAFT 286
L G+F V + + + +T+ + G +GQ+ Y+A+K GV T
Sbjct: 115 LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMT 174
Query: 287 KSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKPE 337
+A ++A+ IR I PG +TP+ S+P++ + + + +P R G P+
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPD 226
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ Y+A+K GV T +A ++A+ IR I PG +TP+ +P++ + + +
Sbjct: 156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQ 215
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+P R G P+E G + + + + G +I++ G +
Sbjct: 216 VPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAI 252
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-CVPDKVKET-FTRLIPFK 426
+YAA+K G++ T+++A+E A GIR N I PG + TP+ D V+ +IP
Sbjct: 165 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMG 224
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
GKPEE+ V FLAS ++SY+TG + GG+
Sbjct: 225 YIGKPEEVAAVAAFLASSQASYVTGITLFADGGM 258
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 264 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT 313
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 314 TS-VPDKVKET-FTRLIPLKRFGKPEAVC 340
D V+ +IP+ GKPE V
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPEEVA 233
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 22/146 (15%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 97 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM- 145
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 146 ITSVPDKVKET-FTRLIPLKRFGKPE 170
D V+ +IP+ GKPE
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPE 230
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV------PDKVKETFT 420
++ Y A+K + + T++ A + A GIR N + PG I++P T + P K++ F
Sbjct: 170 RTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN 229
Query: 421 RLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G EEI E FLASDRS + TG+++ V GG
Sbjct: 230 ARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTVDGG 268
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 8/175 (4%)
Query: 173 STHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 232
S + +DVS+ + + K+ R +VLVN AG + + E+ + ++ V
Sbjct: 73 SKAFGVRVDVSSAKDAESXVEKTTAKWGRV-DVLVNNAGFGTTGNVVTIPEETWDRIXSV 131
Query: 233 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 292
N+KG FL S+ V + ++ Y A+K + + T++ A +
Sbjct: 132 NVKGIFLCSKYVIP-VXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXD 190
Query: 293 MATFGIRCNVILPGFIETPMTTSV------PDKVKETFTRLIPLKRFGKPEAVCK 341
A GIR N + PG I++P T + P K++ F R G E + +
Sbjct: 191 HAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAE 245
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65
S + +DVS+ + + K+ R +VLVN AG + + E+ + ++ V
Sbjct: 73 SKAFGVRVDVSSAKDAESXVEKTTAKWGRV-DVLVNNAGFGTTGNVVTIPEETWDRIXSV 131
Query: 66 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 125
N+KG FL S+ V + ++ Y A+K + + T++ A +
Sbjct: 132 NVKGIFLCSKYVIP-VXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXD 190
Query: 126 MATFGIRCNVILPGFIETPMITSV------PDKVKETFTRLIPLKRFGKPE 170
A GIR N + PG I++P T + P K++ F R G E
Sbjct: 191 HAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAE 241
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-CVPDKVKET-FTRLIPFK 426
+YAA+K G++ T+++A+E A GIR N I PG + TP+ D V+ +IP
Sbjct: 165 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMG 224
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
GKPEE+ V FLAS ++SY+TG + GG+
Sbjct: 225 YIGKPEEVAAVAAFLASSQASYVTGITLFADGGM 258
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 264 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT 313
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 314 TS-VPDKVKET-FTRLIPLKRFGKPEAVC 340
D V+ +IP+ GKPE V
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPEEVA 233
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 22/146 (15%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 97 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM- 145
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 146 ITSVPDKVKET-FTRLIPLKRFGKPE 170
D V+ +IP+ GKPE
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPE 230
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC--VPDKVKETFTRL----- 422
YA KA ++ +T+S A+++A FGIR N + PG +ET T +PD+ + F
Sbjct: 162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK 221
Query: 423 --IPFKRFGKPEEIGEVICFLASDR--SSYITGTLIKVTGG 459
IP GKPE I +I FLA DR S YI G I GG
Sbjct: 222 ECIPIGAAGKPEHIANIILFLA-DRNLSFYILGQSIVADGG 261
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 204 NVLVNCAGITRDNWFLKLTEKD-----FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXX 258
+VLVN AG + F T D + + +NL+ +++ V LV +K
Sbjct: 88 DVLVNNAGAAIPDAF-GTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNV 146
Query: 259 XXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTS 315
G Q + YA KA ++ +T+S A+++A FGIR N + PG +ET T +
Sbjct: 147 SSIVA----GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA 202
Query: 316 --VPDKVKETFTRL-------IPLKRFGKPEAVC 340
+PD+ + F IP+ GKPE +
Sbjct: 203 MGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA 236
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 37 NVLVNCAGITRDNWFLKLTEKD-----FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXX 91
+VLVN AG + F T D + + +NL+ +++ V LV +K
Sbjct: 88 DVLVNNAGAAIPDAF-GTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNV 146
Query: 92 XXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS 148
G Q + YA KA ++ +T+S A+++A FGIR N + PG +ET +
Sbjct: 147 SSIVA----GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA 202
Query: 149 --VPDKVKETFTRL-------IPLKRFGKPE 170
+PD+ + F IP+ GKPE
Sbjct: 203 MGMPDQASQKFYNFMASHKECIPIGAAGKPE 233
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G G S+Y A+KA F ++ A+E+A G+ N ILPG I T + ++ R
Sbjct: 185 GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARS 244
Query: 423 IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP G P +IG + FLA+D + YITG I V GG
Sbjct: 245 IPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ + + +DVS+ + + A T+ + F V N AGI + +T + +V
Sbjct: 89 GAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCAN-AGIFPEARLDTMTPEQLSEVL 147
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
DVN+KGT QA L + G G S+Y A+KA F ++ A
Sbjct: 148 DVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAA 207
Query: 291 MEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKP 336
+E+A G+ N ILPG I T + ++ R IP+ G P
Sbjct: 208 IELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP 253
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+ + + +DVS+ + + A + + F V N AGI + +T + +V
Sbjct: 89 GAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCAN-AGIFPEARLDTMTPEQLSEVL 147
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
DVN+KGT QA L + G G S+Y A+KA F ++ A
Sbjct: 148 DVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAA 207
Query: 124 MEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
+E+A G+ N ILPG I T + + ++ R IP+ G P
Sbjct: 208 IELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP 253
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-CVPDKVKET-FTRLIPFK 426
+YAA+K G++ T+++A+E A GIR N I PG + TP+ D V+ +IP
Sbjct: 165 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMG 224
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
GKPEE+ V FLAS ++SY+TG + GG+
Sbjct: 225 YIGKPEEVAAVAAFLASSQASYVTGITLFADGGM 258
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 264 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT 313
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 314 TS-VPDKVKET-FTRLIPLKRFGKPEAVC 340
D V+ +IP+ GKPE V
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPEEVA 233
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 22/146 (15%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+V++N AG+ +L+ ++ +V D NL G FL S+ K VE
Sbjct: 95 DVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIK--------- 145
Query: 97 VGQMGNMGQSN----------YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM- 145
G + NM + YAA+K G++ T+++A+E A GIR N I PG + TP+
Sbjct: 146 -GNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPIN 204
Query: 146 ITSVPDKVKET-FTRLIPLKRFGKPE 170
D V+ +IP+ GKPE
Sbjct: 205 AEKFADPVQRADVESMIPMGYIGKPE 230
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
++ DV++ S I A + + E+ ++LVN AGI ++L D+Q+V D NL
Sbjct: 79 AVAFDVTSESEIIEAFARLDEQ-GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTS 137
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
F++ + K ++ + ++ + Y K G++ T+++A E A +
Sbjct: 138 AFMIGREAAKRMI-PRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQY 196
Query: 297 GIRCNVILPGFIETPMTTSVPDKVK-ETFTRL-IPLKRFGKPEAVCKELVET 346
GI+ N I PG++ T M ++ D + + + + P KR+GKP+ ELV T
Sbjct: 197 GIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQ----ELVGT 244
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
++ DV++ S I A + + E+ ++LVN AGI ++L D+Q+V D NL
Sbjct: 79 AVAFDVTSESEIIEAFARLDEQ-GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTS 137
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
F++ + K ++ + ++ + Y K G++ T+++A E A +
Sbjct: 138 AFMIGREAAKRMI-PRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQY 196
Query: 130 GIRCNVILPGFIETPMITSVPDKVK-ETFTRL-IPLKRFGKPE---GSSTHLS 177
GI+ N I PG++ T M ++ D + + + + P KR+GKP+ G++ LS
Sbjct: 197 GIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLS 249
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVK-ETFTRL-IPFKR 427
Y K G++ T+++A E A +GI+ N I PG++ T M + D + + + + P KR
Sbjct: 175 YTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKR 234
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+GKP+E+ FL++ S Y+ G +I V GG+
Sbjct: 235 WGKPQELVGTAVFLSASASDYVNGQIIYVDGGM 267
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 15 VSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVS 74
+ I TA+ A F R ++LVN AGI RD +K +E+D+ V DV+LKG+F +
Sbjct: 87 IDGAKVIETAIKA----FGRV-DILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCT 141
Query: 75 QAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCN 134
QA + + + G GN GQ NY A K G+ +VA+E A + CN
Sbjct: 142 QAAFPYM-KKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCN 200
Query: 135 VILP 138
VI+P
Sbjct: 201 VIVP 204
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI RD +K +E+D+ V DV+LKG+F +QA + + +
Sbjct: 104 DILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM-KKQNYGRIIMTSSN 162
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILP 305
G GN GQ NY A K G+ +VA+E A + CNVI+P
Sbjct: 163 SGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G GN GQ NY A K G+ +VA+E A + CNVI+P +PD + F
Sbjct: 164 GIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGILPDIL---F 220
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
L KP+ I V+ +L + S G+ I+ G AT
Sbjct: 221 NEL-------KPKLIAPVVAYLCHE-SCEDNGSYIESAAGWAT 255
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT---CVPDKVKETFTRLIPF 425
+YAA+K G++ T+++A+E A GIR N I PG I TP+ P++ + +IP
Sbjct: 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQ-RADVESMIPM 215
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+PEEI V +LAS +SY+TG + GG+
Sbjct: 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 185 TSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 244
+ I+ S IKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 245 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 304
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 305 PGFIETPMTT---SVPDKVKETFTRLIPLKRFGKPEAVC 340
PG I TP+ + P++ + +IP+ G+PE +
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPEEIA 225
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 77
+ I+ SAIKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 78 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 137
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 138 PGFIETPMIT---SVPDKVKETFTRLIPLKRFGKPE 170
PG I TP+ + P++ + +IP+ G+PE
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPE 222
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT---CVPDKVKETFTRLIPF 425
+YAA+K G++ T+++A+E A GIR N I PG I TP+ P++ + +IP
Sbjct: 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQ-RADVESMIPM 215
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+PEEI V +LAS +SY+TG + GG+
Sbjct: 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 185 TSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 244
+ I+ S IKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 245 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 304
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 305 PGFIETPMTT---SVPDKVKETFTRLIPLKRFGKPEAVC 340
PG I TP+ + P++ + +IP+ G+PE +
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPEEIA 225
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 77
+ I+ SAIKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 78 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 137
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 138 PGFIETPMIT---SVPDKVKETFTRLIPLKRFGKPE 170
PG I TP+ + P++ + +IP+ G+PE
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPE 222
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC-------VPDKVKET 418
G + Y TKA + + T+ + A GIR N + P + TP PD+
Sbjct: 162 GHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAE 221
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
R +P R +PE+I +V+ FLASD + Y+ G+L++V GG A
Sbjct: 222 LGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKA 264
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 9/176 (5%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ 61
+ G + L LP D+ + A+ R +++VN AG+ + T+ D+
Sbjct: 62 VAGIAADLHLPGDLREAAYADGLPGAVAAGLGRL-DIVVNNAGVISRGRITETTDADWSL 120
Query: 62 VFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKS 121
VN++ F + +A L G G + Y TKA + + T+
Sbjct: 121 SLGVNVEAPFRICRAAIP-LXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC 179
Query: 122 VAMEMATFGIRCNVILPGFIETPMITS-------VPDKVKETFTRLIPLKRFGKPE 170
+ A GIR N + P + TP + + PD+ R +PL R +PE
Sbjct: 180 XGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE 235
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 9/176 (5%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G + L LP D+ + + R +++VN AG+ + T+ D+
Sbjct: 64 GIAADLHLPGDLREAAYADGLPGAVAAGLGRL-DIVVNNAGVISRGRITETTDADWSLSL 122
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
VN++ F + +A L G G + Y TKA + + T+
Sbjct: 123 GVNVEAPFRICRAAIP-LXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXG 181
Query: 291 MEMATFGIRCNVILPGFIETPMTTS-------VPDKVKETFTRLIPLKRFGKPEAV 339
+ A GIR N + P + TP + PD+ R +PL R +PE +
Sbjct: 182 XDHAPQGIRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDI 237
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT---CVPDKVKETFTRLIPF 425
+YAA+K G++ T+++A+E A GIR N I PG I TP+ P++ + +IP
Sbjct: 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQ-RADVESMIPM 215
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+PEEI V +LAS +SY+TG + GG+
Sbjct: 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM 250
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 185 TSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 244
+ I+ S IKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 245 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 304
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 305 PGFIETPMTT---SVPDKVKETFTRLIPLKRFGKPEAVC 340
PG I TP+ + P++ + +IP+ G+PE +
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPEEIA 225
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAV 77
+ I+ SAIKE F + +V++N AG+ +++ D+ +V D NL G FL S+
Sbjct: 70 SDVINLVQSAIKE-FGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 78 CKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL 137
K VE ++ +YAA+K G++ T+++A+E A GIR N I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 138 PGFIETPMIT---SVPDKVKETFTRLIPLKRFGKPE 170
PG I TP+ + P++ + +IP+ G+PE
Sbjct: 188 PGAINTPINAEKFADPEQ-RADVESMIPMGYIGEPE 222
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPG-----FIETPMTTCVPD 413
+G QS+YAA KAGV A T+ A+E FG+R N + P F+E ++ + D
Sbjct: 163 LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLD 222
Query: 414 KVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVT 457
++ F R +P E+ I FLASD SSY+TG ++ V+
Sbjct: 223 RLASDE----AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVS 262
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++T + ++ EK R +VLVN AG+ + +T++++ +V +V L
Sbjct: 81 DVTSTEAVDALITQTVEKAGRL-DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRA 139
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
++A + +G QS+YAA KAGV A T+ A+E FG+R
Sbjct: 140 TRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRI 199
Query: 301 NVILPG-----FIETPMTTSVPDKV--KETFTR 326
N + P F+E ++ + D++ E F R
Sbjct: 200 NAVSPSIARHKFLEKTSSSELLDRLASDEAFGR 232
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++T + ++ EK R +VLVN AG+ + +T++++ +V +V L
Sbjct: 81 DVTSTEAVDALITQTVEKAGRL-DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRA 139
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
++A + +G QS+YAA KAGV A T+ A+E FG+R
Sbjct: 140 TRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRI 199
Query: 134 NVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
N + P + E RL + FG+
Sbjct: 200 NAVSPSIARHKFLEKTSS--SELLDRLASDEAFGRA 233
>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|D Chain D, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
Length = 249
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 364 NMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP-MTTCVPDKVKETFTRL 422
N+ SN A + + F K+++ E+A +GI N + PG+ ET + + ++ K+
Sbjct: 149 NLYTSNSA--RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQ 206
Query: 423 IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
IP +R KPEEI V+ FL S+++SY+TG I V GGL+
Sbjct: 207 IPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LV AG + +F +LT +DF++ D + + + E
Sbjct: 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142
Query: 97 V-GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS-VPDKVK 154
V + N+ SN A + + F K+++ E+A +GI N + PG+ ET + + ++ K
Sbjct: 143 VISPIENLYTSNSA--RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK 200
Query: 155 ETFTRLIPLKRFGKPE 170
+ IP++R KPE
Sbjct: 201 KQVESQIPMRRMAKPE 216
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LV AG + +F +LT +DF++ D + + + E
Sbjct: 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142
Query: 264 V-GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTS-VPDKVK 321
V + N+ SN A + + F K+++ E+A +GI N + PG+ ET + ++ K
Sbjct: 143 VISPIENLYTSNSA--RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK 200
Query: 322 ETFTRLIPLKRFGKPEAVC 340
+ IP++R KPE +
Sbjct: 201 KQVESQIPMRRMAKPEEIA 219
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGIT---RDNWFLKLTEKDFQQVFDVNL 234
L D+++ S+ + + +F R + LVN AGI RD+ FL L ++F + VNL
Sbjct: 84 LRADLADLSSHQATVDAVVAEFGRI-DCLVNNAGIASIVRDD-FLDLKPENFDTIVGVNL 141
Query: 235 KGTFLVSQAVCKELV--ETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 292
+GT +QAV K + + + + + +Y +KAG+ AF++ +A+
Sbjct: 142 RGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALR 201
Query: 293 MATFGIRCNVILPGFIETPMTTSVPDKVKETF-TRLIPLKRFGKPEAV 339
+A GI + PG I + T +V K + L+P +R+G+PE +
Sbjct: 202 LAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPEDI 249
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT---RDNWFLKLTEKDFQQVFDVNL 67
L D+++ S+ + A+ +F R + LVN AGI RD+ FL L ++F + VNL
Sbjct: 84 LRADLADLSSHQATVDAVVAEFGRI-DCLVNNAGIASIVRDD-FLDLKPENFDTIVGVNL 141
Query: 68 KGTFLVSQAVCKELV--ETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 125
+GT +QAV K + + + + + +Y +KAG+ AF++ +A+
Sbjct: 142 RGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALR 201
Query: 126 MATFGIRCNVILPGFIETPMITSVPDKVKETF-TRLIPLKRFGKPE 170
+A GI + PG I + +V K + L+P +R+G+PE
Sbjct: 202 LAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWGEPE 247
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF-TRLIPFKR 427
+Y +KAG+ AF++ +A+ +A GI + PG I + T V K + L+P +R
Sbjct: 183 DYCXSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXRR 242
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+G+PE+IG ++ LA + + TG++I+ GGL+
Sbjct: 243 WGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G MG S+Y A+K GV +K A+E+ T IR N + PG TPMT + E
Sbjct: 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN 200
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
P R G+P EI + L SD SSY+TG + V GG T
Sbjct: 201 YPNTPMGRVGEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT 243
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV+ ++ +E+F LVN AGI+ + + + F++V ++NL G F+
Sbjct: 58 LDVTIEEDWQRVVAYAREEFGSVDG-LVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+ V + + G MG S+Y A+K GV +K A+E+ T IR
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELVE 345
N + PG TPMT + E P+ R G+P + +V+
Sbjct: 176 VNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGEPGEIAGAVVK 221
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV+ ++ +E+F LVN AGI+ + + + F++V ++NL G F+
Sbjct: 58 LDVTIEEDWQRVVAYAREEFGSVDG-LVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+ V + + G MG S+Y A+K GV +K A+E+ T IR
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKP 169
N + PG TPM + E P+ R G+P
Sbjct: 176 VNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGEP 212
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP------MTTCVPDKVKETFTRLI 423
Y+ TKA V TKSVA + GIRCN + PG ++TP P++ + F +
Sbjct: 147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ 206
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
RF EEI + +LASD S+Y+TG + + GG +
Sbjct: 207 KTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VL N AG L EKD+ ++N++ +L+ +A +++ K
Sbjct: 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP------MTTSVP 317
G + + Y+ TKA V TKSVA + GIRCN + PG ++TP P
Sbjct: 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP 195
Query: 318 DKVKETFTRLIPLKRFGKPEAV 339
++ + F + RF E +
Sbjct: 196 EEARNDFLKRQKTGRFATAEEI 217
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VL N AG L EKD+ ++N++ +L+ +A +++ K
Sbjct: 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------P 150
G + + Y+ TKA V TKSVA + GIRCN + PG ++TP + P
Sbjct: 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP 195
Query: 151 DKVKETFTRLIPLKRFGKPE 170
++ + F + RF E
Sbjct: 196 EEARNDFLKRQKTGRFATAE 215
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 261
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 262 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTSVPD 318
Q S Y +TK ++ TK +A+E+ IR N + P + T M T S P
Sbjct: 136 SQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH 195
Query: 319 KVKETFTRLIPLKRFGKPEAVCKELV 344
K K R IPL +F + E V ++
Sbjct: 196 KAKTMLNR-IPLGKFAEVEHVVNAIL 220
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 94
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 95 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---ITSVPD 151
Q S Y +TK ++ TK +A+E+ IR N + P + T M S P
Sbjct: 136 SQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH 195
Query: 152 KVKETFTRLIPLKRFGKPE 170
K K R IPL +F + E
Sbjct: 196 KAKTMLNR-IPLGKFAEVE 213
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTCVPDKVKETFTRLI 423
S Y +TK ++ TK +A+E+ IR N + P + T M T P K K R I
Sbjct: 146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR-I 204
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P +F + E + I FL SDRS TG+ + V GG
Sbjct: 205 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE----KDFQQVFDVNLKG 236
DV+N + + A++ K++F + LVNCAG L + F + VNL G
Sbjct: 61 DVTNEADATAALAFAKQEFGHV-HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119
Query: 237 TF----LVSQAVCKELVETKXXXXXXXXXXXVGQM-GNMGQSNYAATKAGVEAFTKSVAM 291
TF L ++ + + + G +GQ+ YAA+K GV A T A
Sbjct: 120 TFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 292 EMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL-KRFGKPE---AVCKELVE 345
E+A FGIR I PG +TP P V++ +P R G+ E A+ K + E
Sbjct: 180 ELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPRLGRAEEYAALVKHICE 237
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G +GQ+ YAA+K GV A T A E+A FGIR I PG +TP P V++
Sbjct: 156 GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAAS 215
Query: 423 IPF-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+PF R G+ EE ++ + + + + G +I++ G L
Sbjct: 216 VPFPPRLGRAEEYAALVKHICEN--TXLNGEVIRLDGAL 252
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE----KDFQQVFDVNLKG 69
DV+N + + A++ K++F + LVNCAG L + F + VNL G
Sbjct: 61 DVTNEADATAALAFAKQEFGHV-HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119
Query: 70 TF----LVSQAVCKELVETKXXXXXXXXXXXVGQM-GNMGQSNYAATKAGVEAFTKSVAM 124
TF L ++ + + + G +GQ+ YAA+K GV A T A
Sbjct: 120 TFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 125 EMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPL-KRFGKPE 170
E+A FGIR I PG +TP P V++ +P R G+ E
Sbjct: 180 ELARFGIRVVTIAPGIFDTPXXAGXPQDVQDALAASVPFPPRLGRAE 226
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 261
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 262 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTSVPD 318
Q S Y +TK ++ TK +A+E+ IR N + P + T M T S P
Sbjct: 136 SQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH 195
Query: 319 KVKETFTRLIPLKRFGKPEAVCKELV 344
K K R IPL +F + E V ++
Sbjct: 196 KAKTMLNR-IPLGKFAEVEHVVNAIL 220
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 94
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 95 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---ITSVPD 151
Q S Y +TK ++ TK +A+E+ IR N + P + T M S P
Sbjct: 136 SQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH 195
Query: 152 KVKETFTRLIPLKRFGKPE 170
K K R IPL +F + E
Sbjct: 196 KAKTMLNR-IPLGKFAEVE 213
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTCVPDKVKETFTRLI 423
S Y +TK ++ TK +A+E+ IR N + P + T M T P K K R I
Sbjct: 146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR-I 204
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P +F + E + I FL SDRS TG+ + V GG
Sbjct: 205 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 307 FIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELVETKXXXXXXXXXXXVGQMGNMG 366
F + P+ T P+++ F + F +A L+ + G G
Sbjct: 99 FPDAPLATMTPEQLNGIFAVNVN-GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG 157
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFK 426
S+Y ATKA F ++ A+E+A I N I+PG I T ++ + R IP
Sbjct: 158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAG 217
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G PE+IG + FLA+ + YITG I V GG
Sbjct: 218 ALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 1/167 (0%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
GS + + DVS+ + E+F V N AG+ D +T + +F
Sbjct: 58 GSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCAN-AGVFPDAPLATMTPEQLNGIF 116
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
VN+ GTF QA L+ + G G S+Y ATKA F ++ A
Sbjct: 117 AVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 124 MEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
+E+A I N I+PG I T + ++ + R IP G PE
Sbjct: 177 IELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPE 223
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
GS + + DVS+ + E+F V N AG+ D +T + +F
Sbjct: 58 GSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCAN-AGVFPDAPLATMTPEQLNGIF 116
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
VN+ GTF QA L+ + G G S+Y ATKA F ++ A
Sbjct: 117 AVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 291 MEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAV 339
+E+A I N I+PG I T ++ + R IP G PE +
Sbjct: 177 IELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDI 225
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFT----RLIPFK 426
A +AGV TKS+A+E A GIR N + PG I + ++F + IP K
Sbjct: 172 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK 231
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G PEE+ V+CFL S +S+ITG + V GG
Sbjct: 232 RIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 20/239 (8%)
Query: 105 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLK 164
Q A G K++ E+ G NV+ I + + + E L P K
Sbjct: 17 QGQVAIVTGGATGIGKAIVKELLELG--SNVV----IASRKLERLKSAADELQANLPPTK 70
Query: 165 RFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEK 224
+ + + + ++ N ++ + + + F + N LVN G + ++ K
Sbjct: 71 Q-------ARVIPIQCNIRNEEEVNNLVKSTLDTFGKI-NFLVNNGGGQFLSPAEHISSK 122
Query: 225 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 284
+ V + NL GTF + +AV ++ + G + A +AGV
Sbjct: 123 GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT--KAGFPLAVHSGAARAGVYN 180
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETF----TRLIPLKRFGKPEAV 339
TKS+A+E A GIR N + PG I + ++F + IP KR G PE V
Sbjct: 181 LTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV 239
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
N LVN G + ++ K + V + NL GTF + +AV ++
Sbjct: 102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT 161
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
+ G + A +AGV TKS+A+E A GIR N + PG I + ++
Sbjct: 162 --KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS 219
Query: 157 F----TRLIPLKRFGKPE 170
F + IP KR G PE
Sbjct: 220 FFEGSFQKIPAKRIGVPE 237
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLI-PFKRF 428
Y A K GV FT+++A E+ + I N + PG IE+ P F ++ K
Sbjct: 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGK 212
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G+PE I +V+ FLASD + +ITG + V G+
Sbjct: 213 GQPEHIADVVSFLASDDARWITGQTLNVDAGM 244
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVN 233
++ D+S+ ++ + I + + ++LVN A I F+ + D ++++ DVN
Sbjct: 56 AIAADISDPGSVKALFAEI-QALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVN 111
Query: 234 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 293
L GTF+V++A ++ G + Y A K GV FT+++A E+
Sbjct: 112 LTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATEL 171
Query: 294 ATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLI-PLKRFGKPEAVC 340
+ I N + PG IE+ + P F ++ +K G+PE +
Sbjct: 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIA 219
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVN 66
++ D+S+ ++ + I + + ++LVN A I F+ + D ++++ DVN
Sbjct: 56 AIAADISDPGSVKALFAEI-QALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVN 111
Query: 67 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 126
L GTF+V++A ++ G + Y A K GV FT+++A E+
Sbjct: 112 LTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATEL 171
Query: 127 ATFGIRCNVILPGFIETPMITSVPDKVKETFTRLI-PLKRFGKPE 170
+ I N + PG IE+ + + P F ++ +K G+PE
Sbjct: 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPE 216
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT----TCVPDK- 414
G + + +S Y A K GV FTK A+E A GI N I PG++ TP+ + + +K
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKN 204
Query: 415 -------VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+E + P +F PE++G FLASD ++ ITGT + V GG
Sbjct: 205 GVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
G + + +S Y A K GV FTK A+E A GI N I PG++ TP++
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV 193
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
G + + +S Y A K GV FTK A+E A GI N I PG++ TP+
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC---VPDKVKETFTRLIPF 425
+YAATKA + +++ +A ++A GIR N++ PG I T + DK+ + F + P
Sbjct: 198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ-FGQQTPM 256
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
KR G+P E+ V +LAS SSY+T + V GG
Sbjct: 257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQVFDVNLKG 236
LP D+S+ S + + +E ++L AG +K LT + FQQ F VN+
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGL-DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
F ++Q L + + +YAATKA + +++ +A ++A
Sbjct: 164 LFWITQEAIPLLPKGASIITTSSIQAYQPSPHLL---DYAATKAAILNYSRGLAKQVAEK 220
Query: 297 GIRCNVILPGFIETPMTTS---VPDKVKETFTRLIPLKRFGKP 336
GIR N++ PG I T + S DK+ + F + P+KR G+P
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQ-FGQQTPMKRAGQP 262
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQVFDVNLKG 69
LP D+S+ S + + +E ++L AG +K LT + FQQ F VN+
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGL-DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
F ++Q L + + +YAATKA + +++ +A ++A
Sbjct: 164 LFWITQEAIPLLPKGASIITTSSIQAYQPSPHLL---DYAATKAAILNYSRGLAKQVAEK 220
Query: 130 GIRCNVILPGFIETPMITS---VPDKVKETFTRLIPLKRFGKP 169
GIR N++ PG I T + S DK+ + F + P+KR G+P
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQ-FGQQTPMKRAGQP 262
>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex
pdb|1W6U|B Chain B, Structure Of Human Decr Ternary Complex
pdb|1W6U|D Chain D, Structure Of Human Decr Ternary Complex
pdb|1W6U|C Chain C, Structure Of Human Decr Ternary Complex
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 52/102 (50%), Gaps = 23/102 (22%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL-------- 422
A+ KAGVEA +KS+A E +G+R NVI PG P K K F+RL
Sbjct: 178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPG----------PIKTKGAFSRLDPTGTFEK 227
Query: 423 -----IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP R G EE+ + FL SD +S+I G +IK GG
Sbjct: 228 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 62
TG+ H ++ DV + + +S + K + PN+++N A + +L+ ++ +
Sbjct: 74 TGNKVH-AIQCDVRDPDMVQNTVSELI-KVAGHPNIVINNAAGNFISPTERLSPNAWKTI 131
Query: 63 FDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSV 122
D+ L GT V+ + K+L++ + + G+ A+ KAGVEA +KS+
Sbjct: 132 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSL 191
Query: 123 AMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGK 168
A E +G+R NVI PG P K K F+RL P F K
Sbjct: 192 AAEWGKYGMRFNVIQPG----------PIKTKGAFSRLDPTGTFEK 227
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ H ++ DV + + +S + K + PN+++N A + +L+ ++ +
Sbjct: 75 GNKVH-AIQCDVRDPDMVQNTVSELI-KVAGHPNIVINNAAGNFISPTERLSPNAWKTIT 132
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
D+ L GT V+ + K+L++ + + G+ A+ KAGVEA +KS+A
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLA 192
Query: 291 MEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGK 335
E +G+R NVI PG P K K F+RL P F K
Sbjct: 193 AEWGKYGMRFNVIQPG----------PIKTKGAFSRLDPTGTFEK 227
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 159 RLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWF 218
R++ R KP ++ D+S T + E+F R + LVN AG+ F
Sbjct: 54 RVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRI-DSLVNNAGVFLAKPF 112
Query: 219 LKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA- 277
++ T++D+ VN+ G F ++Q E ++ V Q S A+
Sbjct: 113 VEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASL 172
Query: 278 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPE 337
TK G+ A T+S+A E + G+R N + PG I+TP P + T L P+ R G+
Sbjct: 173 TKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXH---PAETHSTLAGLHPVGRXGEIR 229
Query: 338 AVCKELV 344
V ++
Sbjct: 230 DVVDAVL 236
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
D+S T + E+F R + LVN AG+ F++ T++D+ VN+ G F +
Sbjct: 76 DISKPETADRIVREGIERFGRI-DSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHI 134
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA-TKAGVEAFTKSVAMEMATFGIR 132
+Q E ++ V Q S A+ TK G+ A T+S+A E + G+R
Sbjct: 135 TQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVR 194
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGK 168
N + PG I+TP P + T L P+ R G+
Sbjct: 195 VNAVSPGVIKTPXH---PAETHSTLAGLHPVGRXGE 227
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKPE 432
TK G+ A T+S+A E + G+R N + PG I+TP P + T L P R G+
Sbjct: 173 TKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXH---PAETHSTLAGLHPVGRXGEIR 229
Query: 433 EIGEVICFLASDRSSYITGTLIKVTGG 459
++ + + +L + + +ITG ++ V GG
Sbjct: 230 DVVDAVLYL--EHAGFITGEILHVDGG 254
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKR 427
Y K + T+++A E A GIR N++ PG++ET T + ++ E T IP R
Sbjct: 144 YTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGR 203
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ +PEEI V L D + Y+TG + V GG
Sbjct: 204 WARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VLV+ A + L+L+ +++++V ++L FL++QA + E
Sbjct: 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVT 131
Query: 264 VGQMGN-MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPD--KV 320
G + Y K + T+++A E A GIR N++ PG++ET T + ++
Sbjct: 132 TFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPEL 191
Query: 321 KETFTRLIPLKRFGKPEAVCK 341
E T IP+ R+ +PE + +
Sbjct: 192 YEPITARIPMGRWARPEEIAR 212
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VLV+ A + L+L+ +++++V ++L FL++QA + E
Sbjct: 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVT 131
Query: 97 VGQMGN-MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPD--KV 153
G + Y K + T+++A E A GIR N++ PG++ET + ++
Sbjct: 132 TFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPEL 191
Query: 154 KETFTRLIPLKRFGKPE 170
E T IP+ R+ +PE
Sbjct: 192 YEPITARIPMGRWARPE 208
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT----TCVPDK- 414
G + + +S Y A K GV FTK A+E A GI N I PG++ +P+ + + +K
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQISALAEKN 204
Query: 415 -------VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+E + P +F PE++G FLASD ++ ITGT + V GG
Sbjct: 205 GVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
G + + +S Y A K GV FTK A+E A GI N I PG++ +P++
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLV 193
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
G + + +S Y A K GV FTK A+E A GI N I PG++ +P+
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPL 192
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRL 422
G + +S +AA K G+ + TK+VA E A +GI N++ PG I M + ++
Sbjct: 154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHN 213
Query: 423 IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P R G E+I I FL D S ITGT+I+VTG +
Sbjct: 214 TPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAV 251
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 268 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRL 327
G + +S +AA K G+ + TK+VA E A +GI N++ PG I M + + ++
Sbjct: 154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHN 213
Query: 328 IPLKRFGKPEAVCK 341
P+ R G E + +
Sbjct: 214 TPIGRSGTGEDIAR 227
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 101 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRL 160
G + +S +AA K G+ + TK+VA E A +GI N++ PG I M + + ++
Sbjct: 154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHN 213
Query: 161 IPLKRFGKPE 170
P+ R G E
Sbjct: 214 TPIGRSGTGE 223
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L+ DVS+ + + +T +E F +VLVN AGI + + F +V VNLK
Sbjct: 80 LTAQADVSDPAAVRRLFATAEEAFG-GVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLK 138
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN--YAATKAGVEAFTKSVAMEM 293
GTF + + L Q+G + S YAA KAGVEA T ++ E+
Sbjct: 139 GTFNTLREAAQRL-----RVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKEL 193
Query: 294 ATFGIRCNVILPGFIETPM-TTSVPDKVKETFTRLIPLKRFGKPEAVC 340
I N + PG T + D+V++ F +L PL+R G P+ +
Sbjct: 194 RGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIA 241
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM-TTCVPDKVKETFTRLIPFKRF 428
YAA KAGVEA T ++ E+ I N + PG T + D+V++ F +L P +R
Sbjct: 175 YAAAKAGVEAXTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERL 234
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
G P++I + FLA +++ G +++ GG+
Sbjct: 235 GTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L+ DVS+ + + + +E F +VLVN AGI + + F +V VNLK
Sbjct: 80 LTAQADVSDPAAVRRLFATAEEAFG-GVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLK 138
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN--YAATKAGVEAFTKSVAMEM 126
GTF + + L Q+G + S YAA KAGVEA T ++ E+
Sbjct: 139 GTFNTLREAAQRL-----RVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKEL 193
Query: 127 ATFGIRCNVILPGFIETPM-ITSVPDKVKETFTRLIPLKRFGKPE 170
I N + PG T + + D+V++ F +L PL+R G P+
Sbjct: 194 RGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQ 238
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV--------PDKVKETF 419
S Y +K V TKS+A++ A +RCN + P I+TP+ P ++++
Sbjct: 151 SAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKI 209
Query: 420 TRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+ P +R GKP+E+ + FLAS +S+ITGT + V GGL+
Sbjct: 210 SEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS 254
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 148 SVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLV 207
++ ++ + +++I L E H+ DV+N + ++ I +++ +VLV
Sbjct: 30 AIAERFVDEGSKVIDLSIHDPGEAKYDHIEC--DVTNPDQVKASIDHIFKEYG-SISVLV 86
Query: 208 NCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQM 267
N AGI ++ +++++ DVNL G + S+ ++ ++ +
Sbjct: 87 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII 146
Query: 268 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT--------SVPDK 319
S Y +K V TKS+A++ A +RCN + P I+TP+ S P +
Sbjct: 147 -TKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMR 204
Query: 320 VKETFTRL---IPLKRFGKPEAVC 340
+++ + P++R GKP+ V
Sbjct: 205 IEKKISEWGHEHPMQRIGKPQEVA 228
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G + + + DV+N + ++ I +++ +VLVN AGI ++ +++++
Sbjct: 51 GEAKYDHIECDVTNPDQVKASIDHIFKEYG-SISVLVNNAGIESYGKIESMSMGEWRRII 109
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
DVNL G + S+ ++ ++ + S Y +K V TKS+A
Sbjct: 110 DVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-TKNASAYVTSKHAVIGLTKSIA 168
Query: 124 MEMATFGIRCNVILPGFIETPMIT--------SVPDKVKETFTRL---IPLKRFGKPE 170
++ A +RCN + P I+TP++ S P ++++ + P++R GKP+
Sbjct: 169 LDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ 225
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV--------PDKVKETF 419
S Y +K V TKS+A++ A +RCN + P I+TP+ P ++++
Sbjct: 144 SAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKI 202
Query: 420 TRL---IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+ P +R GKP+E+ + FLAS +S+ITGT + V GGL+
Sbjct: 203 SEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS 247
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G + + + DV+N + ++ I +++ +VLVN AGI ++ +++++
Sbjct: 44 GEAKYDHIECDVTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRII 102
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
DVNL G + S+ ++ ++ + S Y +K V TKS+A
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-TKNASAYVTSKHAVIGLTKSIA 161
Query: 291 MEMATFGIRCNVILPGFIETPMTT--------SVPDKVKETFTRL---IPLKRFGKPEAV 339
++ A +RCN + P I+TP+ S P ++++ + P++R GKP+ V
Sbjct: 162 LDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEV 220
Query: 340 C 340
Sbjct: 221 A 221
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G + + + DV+N + ++ I +++ +VLVN AGI ++ +++++
Sbjct: 44 GEAKYDHIECDVTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRII 102
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
DVNL G + S+ ++ ++ + S Y +K V TKS+A
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-TKNASAYVTSKHAVIGLTKSIA 161
Query: 124 MEMATFGIRCNVILPGFIETPMIT--------SVPDKVKETFTRL---IPLKRFGKPE 170
++ A +RCN + P I+TP++ S P ++++ + P++R GKP+
Sbjct: 162 LDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ 218
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT----TCVPDK- 414
G + + +S Y A K GV FTK A+E A GI N I PG++ P+ + + +K
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQISALAEKN 204
Query: 415 -------VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+E + P +F PE++G FLASD ++ ITGT + V GG
Sbjct: 205 GVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
G + + +S Y A K GV FTK A+E A GI N I PG++ P++
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLV 193
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI + + + +NL F + A + + +
Sbjct: 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHM-KKQGFGRIINIASA 143
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
G + + +S Y A K GV FTK A+E A GI N I PG++ P+
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPL 192
>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|B Chain B, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|C Chain C, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|D Chain D, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W8D|A Chain A, Binary Structure Of Human Decr.
pdb|1W8D|B Chain B, Binary Structure Of Human Decr.
pdb|1W8D|C Chain C, Binary Structure Of Human Decr.
pdb|1W8D|D Chain D, Binary Structure Of Human Decr
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKV----KETFTRLIPFK 426
A+ KAGVEA +KS+A E +G R NVI PG I+T D KE R IP
Sbjct: 178 ASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGR-IPCG 236
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G EE+ + FL SD +S+I G +IK GG
Sbjct: 237 RLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 62
TG+ H ++ DV + + +S + K + PN+++N A + +L+ ++ +
Sbjct: 74 TGNKVH-AIQCDVRDPDXVQNTVSELI-KVAGHPNIVINNAAGNFISPTERLSPNAWKTI 131
Query: 63 FDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSV 122
D+ L GT V+ + K+L++ + + G+ A+ KAGVEA +KS+
Sbjct: 132 TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSL 191
Query: 123 AMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGK 168
A E +G R NVI PG P K K F+RL P F K
Sbjct: 192 AAEWGKYGXRFNVIQPG----------PIKTKGAFSRLDPTGTFEK 227
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ H ++ DV + + +S + K + PN+++N A + +L+ ++ +
Sbjct: 75 GNKVH-AIQCDVRDPDXVQNTVSELI-KVAGHPNIVINNAAGNFISPTERLSPNAWKTIT 132
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
D+ L GT V+ + K+L++ + + G+ A+ KAGVEA +KS+A
Sbjct: 133 DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLA 192
Query: 291 MEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGK 335
E +G R NVI PG P K K F+RL P F K
Sbjct: 193 AEWGKYGXRFNVIQPG----------PIKTKGAFSRLDPTGTFEK 227
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR-LIPFKRF 428
Y A K GV FT+++A E+ + I N + PG IE+ P F L K
Sbjct: 153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGK 212
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G+PE I +V+ FLASD + +ITG + V G
Sbjct: 213 GQPEHIADVVSFLASDDARWITGQTLNVDAG 243
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVN 66
++ D+S+ ++ + I + + ++LVN A I F+ + D ++++ DVN
Sbjct: 56 AIAADISDPGSVKALFAEI-QALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVN 111
Query: 67 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 126
L GTF+V++A + G + Y A K GV FT+++A E+
Sbjct: 112 LTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATEL 171
Query: 127 ATFGIRCNVILPGFIETPMITSVPDKVKETFTR-LIPLKRFGKPE 170
+ I N + PG IE+ + + P F L K G+PE
Sbjct: 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPE 216
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVN 233
++ D+S+ ++ + I + + ++LVN A I F+ + D ++++ DVN
Sbjct: 56 AIAADISDPGSVKALFAEI-QALTGGIDILVNNASIVP---FVAWDDVDLDHWRKIIDVN 111
Query: 234 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 293
L GTF+V++A + G + Y A K GV FT+++A E+
Sbjct: 112 LTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATEL 171
Query: 294 ATFGIRCNVILPGFIETPMTTSVPDKVKETFTR-LIPLKRFGKPEAVC 340
+ I N + PG IE+ + P F L K G+PE +
Sbjct: 172 GKYNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIA 219
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 150 PDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNC 209
P+++KET RL+ E ++ DV + +++ + +F ++LV+
Sbjct: 92 PEELKETV-RLVE-------EQGRRIIARQADVRDLASLQAVVDEALAEFGHI-DILVSN 142
Query: 210 AGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGN 269
GI+ + LT++ + + NL G + +AV ++E VG G
Sbjct: 143 VGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT 313
GQS+YAA+K GV+ S+A E+ IR N + PG + T M
Sbjct: 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 338 AVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNV 397
AV ++E VG G GQS+YAA+K GV+ S+A E+ IR N
Sbjct: 176 AVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235
Query: 398 ILPGFIETPMT--------------TCVPDKVKETFTRL----IPFKRFGKPEEIGEVIC 439
+ PG + T M + E F++L IP+ +PE++ +
Sbjct: 236 VNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV---EPEDVSNAVA 292
Query: 440 FLASDRSSYITGTLIKVTGG 459
+LASD + YI G I V GG
Sbjct: 293 WLASDEARYIHGAAIPVDGG 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + +++ + +F ++LV+ GI+ + LT++ + + NL G +
Sbjct: 115 DVRDLASLQAVVDEALAEFGHI-DILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHA 173
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
+AV ++E VG G GQS+YAA+K GV+ S+A E+ IR
Sbjct: 174 CRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRV 233
Query: 134 NVILPGFIETPM 145
N + PG + T M
Sbjct: 234 NSVNPGAVNTEM 245
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP-----------DKVKET 418
Y +K + TKS+A+++A + IR N + PG ++T + + D+ ++
Sbjct: 140 YTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ 199
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P R +P+EI E++ FL SD+S + TG LI + GG
Sbjct: 200 EEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGG 240
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP-----------DKVKET 323
Y +K + TKS+A+++A + IR N + PG ++T + ++ D+ ++
Sbjct: 140 YTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ 199
Query: 324 FTRLIPLKRFGKPEAVCKELV 344
+ PL R +P+ + ELV
Sbjct: 200 EEKEFPLNRIAQPQEIA-ELV 219
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVP-----------DKVKET 156
Y +K + TKS+A+++A + IR N + PG ++T + ++ D+ ++
Sbjct: 140 YTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ 199
Query: 157 FTRLIPLKRFGKPE 170
+ PL R +P+
Sbjct: 200 EEKEFPLNRIAQPQ 213
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP----MTTCVPDK 414
VG +G Y ATK V A TK++A++ + +G+R N I PG I TP + +PD
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 202
Query: 415 VKETFTRLI--PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++ P R G+P E+G FLAS+ +++ TG + VTGG
Sbjct: 203 RASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGG 248
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV+ + T +S +F R V+ N + + + F+Q+ ++NL GT+ +
Sbjct: 62 DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
++ L K VG +G Y ATK V A TK++A++ + +G+R
Sbjct: 122 TKLALPYL--RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRV 179
Query: 301 NVILPGFIETPMTTSV----PDKVKETFTRLI--PLKRFGKPEAV 339
N I PG I TP+ + PD ++ PL R G+P V
Sbjct: 180 NCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEV 224
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV+ + T +S +F R V+ N + + + F+Q+ ++NL GT+ +
Sbjct: 62 DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
++ L K VG +G Y ATK V A TK++A++ + +G+R
Sbjct: 122 TKLALPYL--RKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRV 179
Query: 134 NVILPGFIETPMITSV----PDKVKETFTRLI--PLKRFGKP 169
N I PG I TP+ + PD ++ PL R G+P
Sbjct: 180 NCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQP 221
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKET 418
G+ N+ ++Y ++KA V T+++A ++ GIR N I PG I+T + T + +++
Sbjct: 150 GENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERA 209
Query: 419 FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P R G+ ++I FL S +++I+G ++ V+GG
Sbjct: 210 MLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 205 VLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXV 264
VLVN AG F + DF+ F +NL F +SQ + +
Sbjct: 92 VLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHM-QKAGGGAILNISSMA 149
Query: 265 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTSVPDKVKET 323
G+ N+ ++Y ++KA V T+++A ++ GIR N I PG I+T + T + +++
Sbjct: 150 GENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERA 209
Query: 324 FTRLIPLKRFGKPEAVCK 341
+ PL R G+ + +
Sbjct: 210 MLKHTPLGRLGEAQDIAN 227
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ L +V++ + A ++F + VLVN AG F + DF+ F +NL
Sbjct: 64 IGLECNVTDEQHREAVIKAALDQFGKI-TVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLF 121
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
F +SQ + + G+ N+ ++Y ++KA V T+++A ++
Sbjct: 122 SLFRLSQLAAPHM-QKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGP 180
Query: 129 FGIRCNVILPGFIETPMITSV-PDKVKETFTRLIPLKRFGKPE 170
GIR N I PG I+T + +V +++ + PL R G+ +
Sbjct: 181 MGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQ 223
>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
Length = 288
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 246
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 247 L---GRREASAEQIADA 260
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 163 LKR 165
L R
Sbjct: 247 LGR 249
>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|B Chain B, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|C Chain C, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|D Chain D, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
Length = 268
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 226
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 227 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 227 L---GRREASAEQIADA 240
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 163 LKRFGKPEGSSTHLS 177
L G+ E S+ ++
Sbjct: 227 L---GRREASAEQIA 238
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 226
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 227 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 227 L---GRREASAEQIADA 240
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 163 LKRFGKPEGSSTHLS 177
L G+ E S+ ++
Sbjct: 227 L---GRREASAEQIA 238
>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQA|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQF|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|2YHI|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 246
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 247 L---GRREASAEQIADA 260
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 163 LKR 165
L R
Sbjct: 247 LGR 249
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 246
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 247 L---GRREASAEQIADA 260
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 163 LKR 165
L R
Sbjct: 247 LGR 249
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 226
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 227 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 227 L---GRREASAEQIADA 240
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 169 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 226
Query: 163 LKRFGKPEGSSTHLS 177
L G+ E S+ ++
Sbjct: 227 L---GRREASAEQIA 238
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
M S Y K + T+S A+E+A +GIR N + PG P+ + ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA--MGEEEKDKWRRKVP 246
Query: 425 F-KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+R E+I + + FL S + YITG++IKV GGL+
Sbjct: 247 LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 330 LKRFGKPEAVCKELVET 346
L G+ EA +++ +
Sbjct: 247 L---GRREASAEQIADA 260
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
M S Y K + T+S A+E+A +GIR N + PG P+ ++ ++ K+ + R +P
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV--AMGEEEKDKWRRKVP 246
Query: 163 LKR 165
L R
Sbjct: 247 LGR 249
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 147 TSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIK---EKFSRPP 203
+S DKV E R R GK V+N ++ +K + F R
Sbjct: 52 SSAADKVVEEIRR-----RGGKA------------VANYDSVEAGEKLVKTALDTFGRI- 93
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V+VN AGI RD F +++++D+ + V+L+G+F V++A + + +
Sbjct: 94 DVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAW-DHXKKQNYGRIIXTASA 152
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
G GN GQ+NY+A K G+ ++ +E I CN I P T P+ + E
Sbjct: 153 SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRXTETVXPEDLVEA 212
Query: 324 F 324
Sbjct: 213 L 213
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 15 VSNTSTISTAMSAIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
V+N ++ +K + F R +V+VN AGI RD F +++++D+ + V+L+G+F
Sbjct: 70 VANYDSVEAGEKLVKTALDTFGRI-DVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 128
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
V++A + + + G GN GQ+NY+A K G+ ++ +E I
Sbjct: 129 QVTRAAW-DHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNI 187
Query: 132 RCNVILPGFIETPMITSVPDKVKETF 157
CN I P T P+ + E
Sbjct: 188 HCNTIAPNAGSRXTETVXPEDLVEAL 213
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 19/197 (9%)
Query: 266 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVIL--PGFIETPMTTSVPDKVKET 323
+ G +NY + VEA K V + TFG R +V++ G + + + D+ +
Sbjct: 64 RRGGKAVANYDS----VEAGEKLVKTALDTFG-RIDVVVNNAGILRDRSFSRISDEDWDI 118
Query: 324 FTRLIPLKRFGKPEAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKS 383
R+ F A + + + G GN GQ+NY+A K G+ +
Sbjct: 119 IQRVHLRGSFQVTRAAW-DHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANT 177
Query: 384 VAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKPEEIGEVICFLAS 443
+ +E I CN I P T P+ + E KPE + ++ +L
Sbjct: 178 LVIEGRKNNIHCNTIAPNAGSRXTETVXPEDLVEAL----------KPEYVAPLVLWLCH 227
Query: 444 DRSSYITGTLIKVTGGL 460
+ S G L +V G
Sbjct: 228 E-SCEENGGLFEVGAGW 243
>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
pdb|2XOX|B Chain B, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A IR N + PG + + +P V+E + +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLADDMPPAVREDYRSKVP 246
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++R E+ +V+ FL S ++ Y+TGT +KV GG
Sbjct: 247 LYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGG 282
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A IR N + PG + + +P V+E + +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLADDMPPAVREDYRSKVP 246
Query: 330 LKRFGKPEAVCKELV 344
L + A ++V
Sbjct: 247 LYQRDSSAAEVSDVV 261
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A IR N + PG + + +P V+E + +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLADDMPPAVREDYRSKVP 246
Query: 163 L 163
L
Sbjct: 247 L 247
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G MG S+Y A+K GV +K A+E+ T IR N + PG TPMT + E
Sbjct: 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN 200
Query: 420 TRLIPFKRFG-KPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
P R G +P EI + L SD SSY+TG + V GG T
Sbjct: 201 YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT 244
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV+ ++ +E+F LVN AGI+ + + + F++V ++NL G F+
Sbjct: 58 LDVTIEEDWQRVVAYAREEFGSVDG-LVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+ V + + G MG S+Y A+K GV +K A+E+ T IR
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 300 CNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFG-KPEAVCKELVE 345
N + PG TPMT + E P+ R G +P + +V+
Sbjct: 176 VNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK 222
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV+ ++ +E+F LVN AGI+ + + + F++V ++NL G F+
Sbjct: 58 LDVTIEEDWQRVVAYAREEFGSVDG-LVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+ V + + G MG S+Y A+K GV +K A+E+ T IR
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAM 192
N + PG TPM + E P+ R G G + + +S ++ A
Sbjct: 176 VNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235
Query: 193 STIKEKFSRPPNV 205
+ ++ P V
Sbjct: 236 LAVDGGWTTGPTV 248
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DVS+ I + A F ++ N AG+ + T +DF +V +NL+G +L
Sbjct: 82 VDVSDEQQIIAMVDACVAAFGGVDKLVAN-AGVVHLASLIDTTVEDFDRVIAINLRGAWL 140
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
++ ++E + GQ+ G Y +KAG+ ++ A E+ + GIR
Sbjct: 141 CTKHAAPRMIE-RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIR 199
Query: 133 CNVILPGFIETPM 145
N +LP F++TPM
Sbjct: 200 SNTLLPAFVDTPM 212
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DVS+ I + F ++ N AG+ + T +DF +V +NL+G +L
Sbjct: 82 VDVSDEQQIIAMVDACVAAFGGVDKLVAN-AGVVHLASLIDTTVEDFDRVIAINLRGAWL 140
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
++ ++E + GQ+ G Y +KAG+ ++ A E+ + GIR
Sbjct: 141 CTKHAAPRMIE-RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIR 199
Query: 300 CNVILPGFIETPM 312
N +LP F++TPM
Sbjct: 200 SNTLLPAFVDTPM 212
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 314 TSVPDKVKETFTRLIPLKRFGK---PEAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNY 370
S+ D E F R+I + G + ++E + GQ+ G Y
Sbjct: 117 ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE-RGGGAIVNLSSLAGQVAVGGTGAY 175
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---------PDKVKETFTR 421
+KAG+ ++ A E+ + GIR N +LP F++TPM + R
Sbjct: 176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR 235
Query: 422 LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
L R PEE+ ++ FL SD +S ITGT GG
Sbjct: 236 L--QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK---VKETFTRLI--- 423
Y+A+K + TKS+A E A IR N + PG I TP+ K KE I
Sbjct: 171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT 230
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P R GKP+E+ +I FL +SYITG +I GG
Sbjct: 231 PMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 267
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 192 MSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 251
M T+ F N+LVN AG+ TEKD+ + N + + +SQ + L++
Sbjct: 89 MQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ-IAYPLLKA 147
Query: 252 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 311
G S Y+A+K + TKS+A E A IR N + PG I TP
Sbjct: 148 SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 207
Query: 312 MTTSVPDK---VKETFTRLI---PLKRFGKPEAV 339
+ + K KE I P+ R GKP+ V
Sbjct: 208 LVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEV 241
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 25 MSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 84
M + F N+LVN AG+ TEKD+ + N + + +SQ + L++
Sbjct: 89 MQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ-IAYPLLKA 147
Query: 85 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 144
G S Y+A+K + TKS+A E A IR N + PG I TP
Sbjct: 148 SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 207
Query: 145 MITSVPDK---VKETFTRLI---PLKRFGKPE 170
++ + K KE I P+ R GKP+
Sbjct: 208 LVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ 239
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKX-XXXXXXX 260
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 261 XXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTSVP 317
Q S Y +TK ++ TK +A+E+ IR N + P + T M T S P
Sbjct: 136 SQCXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP 195
Query: 318 DKVKETFTRLIPLKRFGKPEAVCKELV 344
K K R IPL +F + E V ++
Sbjct: 196 HKAKTMLNR-IPLGKFAEVEHVVNAIL 221
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKX-XXXXXXX 93
P ++LVN A + FL++T++ F + F+VNL+ VSQ V + L+
Sbjct: 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135
Query: 94 XXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---ITSVP 150
Q S Y +TK ++ TK +A+E+ IR N + P + T M S P
Sbjct: 136 SQCXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP 195
Query: 151 DKVKETFTRLIPLKRFGKPE 170
K K R IPL +F + E
Sbjct: 196 HKAKTMLNR-IPLGKFAEVE 214
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---TTCVPDKVKETFTRLI 423
S Y +TK ++ TK +A+E+ IR N + P + T M T P K K R I
Sbjct: 147 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR-I 205
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P +F + E + I FL SDRS TG+ + V GG
Sbjct: 206 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 241
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV--PDKVKETFTRLIPFKR 427
YAA+K V T+++A E A G+ N + PG++ T T + D+ T IP R
Sbjct: 178 YAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGR 237
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ PE++ FLASD +SY+ G ++ V GG
Sbjct: 238 WATPEDMVGPAVFLASDAASYVHGQVLAVDGG 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 182 VSNTSTISTAMSTIKE-KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
V++ + + A + +E +R +VLVN AGI +++ +++V VNL +++
Sbjct: 85 VADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
S++ ++ Q G + YAA+K V T+++A E A G+
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQ-GGRNVAAYAASKHAVVGLTRALASEWAGRGVGV 203
Query: 301 NVILPGFIETPMTTSV--PDKVKETFTRLIPLKRFGKPE 337
N + PG++ T T ++ D+ T IP R+ PE
Sbjct: 204 NALAPGYVVTANTAALRADDERAAEITARIPAGRWATPE 242
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 33 SRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXX 92
+R +VLVN AGI +++ +++V VNL +++S++ ++
Sbjct: 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTI 163
Query: 93 XXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV--P 150
Q G + YAA+K V T+++A E A G+ N + PG++ T ++
Sbjct: 164 ASMLSFQ-GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD 222
Query: 151 DKVKETFTRLIPLKRFGKPE 170
D+ T IP R+ PE
Sbjct: 223 DERAAEITARIPAGRWATPE 242
>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFK 426
Q++Y KAG +S+A E F R N I PG+I+T ++ VP + ++ + +IP
Sbjct: 172 QTSYNVAKAGCIHMARSLANEWRDFA-RVNSISPGYIDTGLSDFVPKETQQLWHSMIPMG 230
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
R G +E+ + ASD S+Y TG + + GG T
Sbjct: 231 RDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT 266
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+ + AG T D+ L + + + V V+L GTF ++AV E +
Sbjct: 103 DAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKE-RGTGSLVITASM 161
Query: 264 VGQMGN--MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK 321
G + N Q++Y KAG +S+A E F R N I PG+I+T ++ VP + +
Sbjct: 162 SGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDFA-RVNSISPGYIDTGLSDFVPKETQ 220
Query: 322 ETFTRLIPLKRFGKPEAVCKEL 343
+ + +IP+ R G + KEL
Sbjct: 221 QLWHSMIPMGRDG----LAKEL 238
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+ + AG T D+ L + + + V V+L GTF ++AV E +
Sbjct: 103 DAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKE-RGTGSLVITASM 161
Query: 97 VGQMGN--MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVK 154
G + N Q++Y KAG +S+A E F R N I PG+I+T + VP + +
Sbjct: 162 SGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDFA-RVNSISPGYIDTGLSDFVPKETQ 220
Query: 155 ETFTRLIPLKRFG 167
+ + +IP+ R G
Sbjct: 221 QLWHSMIPMGRDG 233
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------------TTCVP-DKVK 416
YA +KA VE F ++ A++ G+ N I PG ++T M +P +K+
Sbjct: 170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKID 229
Query: 417 ETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
E + P KR G P +IG + L + S +I G +IK+TGG
Sbjct: 230 EGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 22/147 (14%)
Query: 219 LKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAAT 278
L++T++ F +VF++N +G F V+Q K + + N + YA +
Sbjct: 116 LEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--HALYAGS 173
Query: 279 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------------TTSVP-DKVKETFT 325
KA VE F ++ A++ G+ N I PG ++T M +P +K+ E
Sbjct: 174 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA 233
Query: 326 RLIPLKRFGKP-------EAVCKELVE 345
+ PLKR G P A+C+E E
Sbjct: 234 NMNPLKRIGYPADIGRAVSALCQEESE 260
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 52 LKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAAT 111
L++T++ F +VF++N +G F V+Q K + + N + YA +
Sbjct: 116 LEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--HALYAGS 173
Query: 112 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMIT------------SVP-DKVKETFT 158
KA VE F ++ A++ G+ N I PG ++T M +P +K+ E
Sbjct: 174 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA 233
Query: 159 RLIPLKRFGKP 169
+ PLKR G P
Sbjct: 234 NMNPLKRIGYP 244
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-CVPDKV--- 415
G +G+ G++ Y A K GV TK V +E AT + CN I PG++ TP+ + D+
Sbjct: 141 GLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANG 200
Query: 416 -------KETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P F PE +GE++ FL S+ S + G V GG
Sbjct: 201 GDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 71
P D+S+ + I A+ A+ E+ ++LVN AGI + + + ++ +NL F
Sbjct: 57 PADLSDVAQIE-ALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++ + + G +G+ G++ Y A K GV TK V +E AT +
Sbjct: 116 HGTRLALPGM-RARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 132 RCNVILPGFIETPMI 146
CN I PG++ TP++
Sbjct: 175 TCNAICPGWVLTPLV 189
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTF 238
P D+S+ + I + + +F ++LVN AGI + + + ++ +NL F
Sbjct: 57 PADLSDVAQIEALFALAEREFGGV-DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++ + + G +G+ G++ Y A K GV TK V +E AT +
Sbjct: 116 HGTRLALPGM-RARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 299 RCNVILPGFIETPM 312
CN I PG++ TP+
Sbjct: 175 TCNAICPGWVLTPL 188
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP---MTTCVPDKVKETFTRLI--- 423
Y ATK ++ T+ +A E A IR N + PG I T MT P++ KE +LI
Sbjct: 158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQ-KENLNKLIDRC 216
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+R G+P+E+ ++ FL +SY+TG +I V GGL
Sbjct: 217 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
D+S+ S M+T+ F N+LVN AGI T +D+ + +N + + +
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
S + ++ G + ++ Y ATK ++ T+ +A E A IR
Sbjct: 125 S-VLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183
Query: 301 NVILPGFIETP---MTTSVPDKVKETFTRLI---PLKRFGKPE 337
N + PG I T MT P++ KE +LI L+R G+P+
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQ-KENLNKLIDRCALRRMGEPK 225
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
D+S+ S M+ + F N+LVN AGI T +D+ + +N + + +
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
S + ++ G + ++ Y ATK ++ T+ +A E A IR
Sbjct: 125 S-VLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183
Query: 134 NVILPGFIETPMIT-SVPD-KVKETFTRLI---PLKRFGKPE 170
N + PG I T ++ ++ D + KE +LI L+R G+P+
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK 225
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP---MTTCVPDKVKETFTRLI--- 423
Y ATK ++ T+ +A E A IR N + PG I T MT P++ KE +LI
Sbjct: 159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQ-KENLNKLIDRC 217
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+R G+P+E+ ++ FL +SY+TG +I V GGL
Sbjct: 218 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 254
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
D+S+ S M+T+ F N+LVN AGI T +D+ + +N + + +
Sbjct: 66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
S + ++ G + ++ Y ATK ++ T+ +A E A IR
Sbjct: 126 S-VLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184
Query: 301 NVILPGFIETP---MTTSVPDKVKETFTRLI---PLKRFGKPE 337
N + PG I T MT P++ KE +LI L+R G+P+
Sbjct: 185 NGVGPGVIATSLVEMTIQDPEQ-KENLNKLIDRCALRRMGEPK 226
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
D+S+ S M+ + F N+LVN AGI T +D+ + +N + + +
Sbjct: 66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
S + ++ G + ++ Y ATK ++ T+ +A E A IR
Sbjct: 126 S-VLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184
Query: 134 NVILPGFIETPMIT-SVPD-KVKETFTRLI---PLKRFGKPE 170
N + PG I T ++ ++ D + KE +LI L+R G+P+
Sbjct: 185 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK 226
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VLVN AGI+RD L F++V +NL L SQ + + L+ +
Sbjct: 80 DVLVNNAGISRDREEYDLAT--FERVLRLNLSAAMLASQ-LARPLLAQRGGSILNIASM- 135
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
G+ + Y+A+K + T+S+A E A IR N I PG+I+TP+ + V+ T
Sbjct: 136 YSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEAT 195
Query: 324 --FTRLIPLKRFGK-PE 337
+ PL R+G+ PE
Sbjct: 196 RRIMQRTPLARWGEAPE 212
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET--FT 420
G+ + Y+A+K + T+S+A E A IR N I PG+I+TP+ + V+ T
Sbjct: 140 GSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIM 199
Query: 421 RLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P R+G+ E+ FL +S++TG ++ V GG
Sbjct: 200 QRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG 238
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VLVN AGI+RD L F++V +NL L SQ + + L+ +
Sbjct: 80 DVLVNNAGISRDREEYDLAT--FERVLRLNLSAAMLASQ-LARPLLAQRGGSILNIASM- 135
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
G+ + Y+A+K + T+S+A E A IR N I PG+I+TP+ + V+ T
Sbjct: 136 YSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEAT 195
Query: 157 --FTRLIPLKRFGK-PEGSST 174
+ PL R+G+ PE +S
Sbjct: 196 RRIMQRTPLARWGEAPEVASA 216
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT-CVPD-KVKETFTRLIPFKR 427
Y+ TK + T ++A ++ GI N ILPGF++T + D K+ T + F R
Sbjct: 161 YSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNR 220
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G+ E+I + FLAS S ++TG LI V+GG
Sbjct: 221 LGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++L+N AGI + + TE+ F + VN K F + Q L +
Sbjct: 93 DILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR 152
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDK--VK 321
+ + Y+ TK + T ++A ++ GI N ILPGF++T + K
Sbjct: 153 ISLPDFIA---YSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDPXXK 209
Query: 322 ETFTRLIPLKRFGKPEAVC 340
+ T + R G+ E +
Sbjct: 210 QYATTISAFNRLGEVEDIA 228
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++L+N AGI + + TE+ F + VN K F + Q L +
Sbjct: 93 DILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR 152
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---ITSVPDKV 153
+ + Y+ TK + T ++A ++ GI N ILPGF++T + S P
Sbjct: 153 ISLPDFIA---YSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDP-XX 208
Query: 154 KETFTRLIPLKRFGKPE 170
K+ T + R G+ E
Sbjct: 209 KQYATTISAFNRLGEVE 225
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET- 418
G +GN + Y+++K V T++ A ++A GI N PG ++TPM + +V E
Sbjct: 142 GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAA 201
Query: 419 ----------FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
F + I R +PE++ + +LAS S Y+TG + + GG+
Sbjct: 202 GKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
+++ +DVS+ + A+ ++ +V+VN AG+ +T + +V+++N+K
Sbjct: 54 VAVKVDVSDRDQVFAAVEQARKTLGGF-DVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G QA + + G +GN + Y+++K V T++ A ++A
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 296 FGIRCNVILPGFIETPMTTSVPDKVKET-----------FTRLIPLKRFGKPEAVC 340
GI N PG ++TPM + +V E F + I L R +PE V
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVA 228
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+++ +DVS+ + A+ ++ +V+VN AG+ +T + +V+++N+K
Sbjct: 54 VAVKVDVSDRDQVFAAVEQARKTLGGF-DVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G QA + + G +GN + Y+++K V T++ A ++A
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 129 FGIRCNVILPGFIETPMITSVPDKVKET-----------FTRLIPLKRFGKPE 170
GI N PG ++TPM + +V E F + I L R +PE
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE 225
>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
pdb|2Z1N|B Chain B, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
Length = 260
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 381 TKSVAMEMATFGIRCNVILPGFIETPMTTCVPDK--------VKETFTRL---IPFKRFG 429
+++A+E+A G+ N +LP I T + ++ V+E + IP R G
Sbjct: 168 VRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG 227
Query: 430 KPEEIGEVICFLASDRSSYITGTLIKVTGG 459
KPEE+ V+ FLAS+++S+ITG +I V GG
Sbjct: 228 KPEELASVVAFLASEKASFITGAVIPVDGG 257
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LV G R F++L +D+ + + + + V + +++VE
Sbjct: 87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVT 146
Query: 97 VGQ-MGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDK--- 152
+ + ++ SN + V +++A+E+A G+ N +LP I T + S+ ++
Sbjct: 147 LLRPWQDLALSNI--MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR 204
Query: 153 -----VKETFTRL---IPLKRFGKPE 170
V+E + IP+ R GKPE
Sbjct: 205 RSGITVEEALKSMASRIPMGRVGKPE 230
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LV G R F++L +D+ + + + + V + +++VE
Sbjct: 87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVT 146
Query: 264 VGQ-MGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDK--- 319
+ + ++ SN + V +++A+E+A G+ N +LP I T S+ ++
Sbjct: 147 LLRPWQDLALSNI--MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR 204
Query: 320 -----VKETFTRL---IPLKRFGKPEAVC 340
V+E + IP+ R GKPE +
Sbjct: 205 RSGITVEEALKSMASRIPMGRVGKPEELA 233
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET--PMTTCVPDKVK- 416
G G + Y K G+ T+S+A GIR +LPG ++T + + P ++
Sbjct: 147 GIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGM 206
Query: 417 ETFTRLIPFK-RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
T T+L+ R +PE+I VI FLASD +S++ G + V GGL
Sbjct: 207 RTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGL 251
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNL 234
L + DVS + + E +SR +VL N AGI +++++ +++V VNL
Sbjct: 59 LGVKADVSKKKDVEEFVRRTFETYSRI-DVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
Query: 235 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 294
F S+AV +++ + G G + Y K G+ T+S+A
Sbjct: 118 YSAFYSSRAVIPIMLK-QGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 295 TFGIRCNVILPGFIET--PMTTSVPDKVK-ETFTRLIPL-KRFGKPEAVCKELV 344
GIR +LPG ++T + +S P ++ T T+L+ L R +PE + +V
Sbjct: 177 DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIV 230
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNL 67
L + DVS + + E +SR +VL N AGI +++++ +++V VNL
Sbjct: 59 LGVKADVSKKKDVEEFVRRTFETYSRI-DVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 127
F S+AV +++ + G G + Y K G+ T+S+A
Sbjct: 118 YSAFYSSRAVIPIMLK-QGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 128 TFGIRCNVILPGFIET--PMITSVPDKVK-ETFTRLIPLKRFGKPEGSSTHLSLPMDVSN 184
GIR +LPG ++T + +S P ++ T T+L+ L S+ L+ P D++N
Sbjct: 177 DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL---------SSRLAEPEDIAN 227
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV-PDKVKE-TFTRLI 423
G S Y +K + TK++A+E+A IR N + PG I+T + + DK KE + +
Sbjct: 161 GFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETL 220
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+R G+PE+ ++ FL S+ +SYITG + V GG
Sbjct: 221 RIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 256
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 218 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 277
+ +TE+ + + D+N+K L+++AV E+ E + + G S Y
Sbjct: 109 IMDVTEEVWDKTLDINVKAPALMTKAVVPEM-EKRGGGSVVIVSSIAAFSPSPGFSPYNV 167
Query: 278 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-PDKVK-ETFTRLIPLKRFGK 335
+K + TK++A+E+A IR N + PG I+T + + DK K E+ + ++R G+
Sbjct: 168 SKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGE 227
Query: 336 PE 337
PE
Sbjct: 228 PE 229
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 51 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 110
+ +TE+ + + D+N+K L+++AV E+ E + + G S Y
Sbjct: 109 IMDVTEEVWDKTLDINVKAPALMTKAVVPEM-EKRGGGSVVIVSSIAAFSPSPGFSPYNV 167
Query: 111 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV-PDKVK-ETFTRLIPLKRFGK 168
+K + TK++A+E+A IR N + PG I+T + DK K E+ + ++R G+
Sbjct: 168 SKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGE 227
Query: 169 PE 170
PE
Sbjct: 228 PE 229
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-TCVPDK----------- 414
+S Y A K G+ TK+VA+E+A G+ N I PG++ TP+ +PD+
Sbjct: 173 KSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQV 232
Query: 415 VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ E + P K+F E++ + +LA D ++ ITGT + GG
Sbjct: 233 INEVXLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSXDGG 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 121 SVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPM 180
++A +A G N++L GF PD+++ + L S T L P
Sbjct: 40 AIARTLAKAG--ANIVLNGF-------GAPDEIRTVTDEVAGLS-------SGTVLHHPA 83
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
D + S I+ + + ++F ++LVN AG+ + + ++ VNL +F
Sbjct: 84 DXTKPSEIADXXAXVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 300
+ + K G + + +S Y A K G+ TK+VA+E+A G+
Sbjct: 143 IRGAIPP-XKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTV 201
Query: 301 NVILPGFIETPMT-TSVPDKVK 321
N I PG++ TP+ +PD+ +
Sbjct: 202 NSICPGYVLTPLVEKQIPDQAR 223
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64
S T L P D + S I+ + + ++F ++LVN AG+ + + ++
Sbjct: 75 SGTVLHHPADXTKPSEIADXXAXVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIA 133
Query: 65 VNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAM 124
VNL +F + + K G + + +S Y A K G+ TK+VA+
Sbjct: 134 VNLSSSFHTIRGAIPP-XKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVAL 192
Query: 125 EMATFGIRCNVILPGFIETPMI-TSVPDKVK 154
E+A G+ N I PG++ TP++ +PD+ +
Sbjct: 193 EVAESGVTVNSICPGYVLTPLVEKQIPDQAR 223
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 181 DVSNTSTISTAMSTIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
D SN + A I+ E F +VLVN AGI RD +E++F V V+LKG
Sbjct: 91 DGSNVADWDQAAGLIQTAVETFG-GLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGH 149
Query: 238 FL--------------VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVE 283
F +AV ++ T G G++GQ NY+A KAG+
Sbjct: 150 FATMRHAAAYWRGLSKAGKAVDGRIINTSSG---------AGLQGSVGQGNYSAAKAGIA 200
Query: 284 AFTKSVAMEMATFGIRCNVILPGFIETPMTTSV 316
T A EM +G+ N I P T MT +V
Sbjct: 201 TLTLVGAAEMGRYGVTVNAIAP-SARTRMTETV 232
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL--------------VSQAVCKELV 82
+VLVN AGI RD +E++F V V+LKG F +AV ++
Sbjct: 116 DVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRII 175
Query: 83 ETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILP 138
T G G++GQ NY+A KAG+ T A EM +G+ N I P
Sbjct: 176 NTSSG---------AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP 222
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETF 419
G G++GQ NY+A KAG+ T A EM +G+ N I P T MT V ++ T
Sbjct: 182 GLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP-SARTRMTETVFAEMMATQ 240
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ F PE + ++ +L S + +TG + +V GG
Sbjct: 241 DQ--DFDAM-APENVSPLVVWLGSAEARDVTGKVFEVEGG 277
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP-DKV-KETFTRLIPFKR 427
Y +K + TK++A+E+A IR N + PG I+T + + DK KE + +R
Sbjct: 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRR 223
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
G PE+ ++ FL S+ +SYITG + V GG A+
Sbjct: 224 LGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS 258
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 218 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMG---NMGQSN 274
+ TE+ + ++ VN+K T L+++AV E+ K VG N+G
Sbjct: 108 IIDATEEVWDKILHVNVKATVLMTKAVVPEM--EKRGGGSVLIVSSVGAYHPFPNLGP-- 163
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-PDKV-KETFTRLIPLKR 332
Y +K + TK++A+E+A IR N + PG I+T + + DK KE + ++R
Sbjct: 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRR 223
Query: 333 FGKPE 337
G PE
Sbjct: 224 LGNPE 228
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 51 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMG---NMGQSN 107
+ TE+ + ++ VN+K T L+++AV E+ K VG N+G
Sbjct: 108 IIDATEEVWDKILHVNVKATVLMTKAVVPEM--EKRGGGSVLIVSSVGAYHPFPNLGP-- 163
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET--PMITSVPDKVKETFTRLIPLKR 165
Y +K + TK++A+E+A IR N + PG I+T + + KE + ++R
Sbjct: 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRR 223
Query: 166 FGKPE 170
G PE
Sbjct: 224 LGNPE 228
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV------------PDKVKE 417
Y+ +K +E F + +A++MA I NV+ PG I+T M V ++V E
Sbjct: 178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE 237
Query: 418 -TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P +R G P +I V+CFLAS+ ++TG +I + GG
Sbjct: 238 YAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+++ + +G+ +T ++F +VF +N +G F V++ K L +
Sbjct: 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSI 165
Query: 97 VGQMGNM-GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------ 149
GQ + + Y+ +K +E F + +A++MA I NV+ PG I+T M +V
Sbjct: 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP 225
Query: 150 ------PDKVKE-TFTRLIPLKRFGKP 169
++V E + PL+R G P
Sbjct: 226 NGENLSNEEVDEYAAVQWSPLRRVGLP 252
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+++ + +G+ +T ++F +VF +N +G F V++ K L +
Sbjct: 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSI 165
Query: 264 VGQMGNM-GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV------ 316
GQ + + Y+ +K +E F + +A++MA I NV+ PG I+T M +V
Sbjct: 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP 225
Query: 317 ------PDKVKE-TFTRLIPLKRFGKP 336
++V E + PL+R G P
Sbjct: 226 NGENLSNEEVDEYAAVQWSPLRRVGLP 252
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV------------PDKVKE 417
Y+ +K +E F + +A++MA I NV+ PG I+T M V ++V E
Sbjct: 178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE 237
Query: 418 -TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ P +R G P +I V+CFLAS+ ++TG +I + GG
Sbjct: 238 YAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+++ + +G+ +T ++F +VF +N +G F V++ K L +
Sbjct: 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSI 165
Query: 97 VGQMGNM-GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------ 149
GQ + + Y+ +K +E F + +A++MA I NV+ PG I+T M +V
Sbjct: 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP 225
Query: 150 ------PDKVKE-TFTRLIPLKRFGKP 169
++V E + PL+R G P
Sbjct: 226 NGENLSNEEVDEYAAVQWSPLRRVGLP 252
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+++ + +G+ +T ++F +VF +N +G F V++ K L +
Sbjct: 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSI 165
Query: 264 VGQMGNM-GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV------ 316
GQ + + Y+ +K +E F + +A++MA I NV+ PG I+T M +V
Sbjct: 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP 225
Query: 317 ------PDKVKE-TFTRLIPLKRFGKP 336
++V E + PL+R G P
Sbjct: 226 NGENLSNEEVDEYAAVQWSPLRRVGLP 252
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT-TCVPDKVKETFTRLIPFKRF 428
Y K G+ T+ ++ E+ IR N I PG I+T T P ++ + + +P R
Sbjct: 158 YGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRM 217
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G P+++ + FL SD +S+ITG + V GG
Sbjct: 218 GTPDDLVGMCLFLLSDEASWITGQIFNVDGG 248
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 172 SSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCA--GITRDNWFLKLTEKDFQQV 229
T +S+ +DVS+ + +F ++ N A G + ++ L + + +++
Sbjct: 57 GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116
Query: 230 FDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSV 289
VNL G ++AV K++ + N Y K G+ T+ +
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY----YGLAKVGINGLTQQL 172
Query: 290 AMEMATFGIRCNVILPGFIETPMT-TSVPDKVKETFTRLIPLKRFGKPE 337
+ E+ IR N I PG I+T T+ P ++ + + +PL R G P+
Sbjct: 173 SRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPD 221
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 1 MLTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA--GITRDNWFLKLTEKD 58
++ T +S+ +DVS+ + +F ++ N A G + ++ L + +
Sbjct: 53 IVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEY 112
Query: 59 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
+++ VNL G ++AV K++ + N Y K G+
Sbjct: 113 YKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY----YGLAKVGINGL 168
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPM-ITSVPDKVKETFTRLIPLKRFGKPE 170
T+ ++ E+ IR N I PG I+T T+ P ++ + + +PL R G P+
Sbjct: 169 TQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPD 221
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 261
P ++LVN A + FL++T++ F + F VNL+ F VSQ V ++++
Sbjct: 76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135
Query: 262 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV---PD 318
V + Y++TK + TK++AME+ IR N + P + T M V P+
Sbjct: 136 SMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE 195
Query: 319 ---KVKETFTRLIPLKRFGKPEAVCKELV 344
K+KE PL++F + E V ++
Sbjct: 196 FARKLKERH----PLRKFAEVEDVVNSIL 220
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 94
P ++LVN A + FL++T++ F + F VNL+ F VSQ V ++++
Sbjct: 76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135
Query: 95 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM---ITSVPD 151
V + Y++TK + TK++AME+ IR N + P + T M +++ P+
Sbjct: 136 SMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE 195
Query: 152 ---KVKETFTRLIPLKRFGKPE 170
K+KE PL++F + E
Sbjct: 196 FARKLKERH----PLRKFAEVE 213
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PD---KVKETFTRLI 423
Y++TK + TK++AME+ IR N + P + T M V P+ K+KE
Sbjct: 149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH---- 204
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P ++F + E++ I FL SDRS+ +G I V G
Sbjct: 205 PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 240
>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|B Chain B, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|C Chain C, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|D Chain D, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|E Chain E, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|F Chain F, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|G Chain G, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|H Chain H, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex
Length = 307
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 208 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 265
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++R E+ +V+ FL S ++ YITGT +KV GG
Sbjct: 266 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 301
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A IR N + PG + ++ +P V E +P
Sbjct: 208 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 265
Query: 163 L 163
L
Sbjct: 266 L 266
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 208 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 265
Query: 330 LKRFGKPEAVCKELV 344
L + A ++V
Sbjct: 266 LYQRDSSAAEVSDVV 280
>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
pdb|1E7W|B Chain B, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 249
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++R E+ +V+ FL S ++ YITGT +KV GG
Sbjct: 250 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A IR N + PG + ++ +P V E +P
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 249
Query: 163 L 163
L
Sbjct: 250 L 250
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 249
Query: 330 LKRFGKPEAVCKELV 344
L + A ++V
Sbjct: 250 LYQRDSSAAEVSDVV 264
>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|B Chain B, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|C Chain C, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|D Chain D, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|2BF7|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BFA|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFM|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFO|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFP|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|3H4V|A Chain A, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|B Chain B, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|C Chain C, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|D Chain D, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|E Chain E, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|F Chain F, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|G Chain G, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|H Chain H, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 246
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++R E+ +V+ FL S ++ YITGT +KV GG
Sbjct: 247 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 282
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A IR N + PG + ++ +P V E +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 246
Query: 163 L 163
L
Sbjct: 247 L 247
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 189 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 246
Query: 330 LKRFGKPEAVCKELV 344
L + A ++V
Sbjct: 247 LYQRDSSAAEVSDVV 261
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 12/172 (6%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
++ +DV++ ++I ++ + +++ ++LVN A + +++T + + ++F +N+ G
Sbjct: 55 AIALDVTDQASIDRCVAELLDRWG-SIDILVNNAALFDLAPIVEITRESYDRLFAINVSG 113
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
T + QAV + ++ G+ G Y ATKA V + T+S + +
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173
Query: 297 GIRCNVILPGFIETPMTTSVPDKV-----------KETFTRLIPLKRFGKPE 337
GI N I PG ++ V K K +P R G+ E
Sbjct: 174 GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE 225
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
++ +DV++ ++I ++ + +++ ++LVN A + +++T + + ++F +N+ G
Sbjct: 55 AIALDVTDQASIDRCVAELLDRWG-SIDILVNNAALFDLAPIVEITRESYDRLFAINVSG 113
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QAV + ++ G+ G Y ATKA V + T+S + +
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173
Query: 130 GIRCNVILPGFIETPMITSVPDKV-----------KETFTRLIPLKRFGKPE---GSSTH 175
GI N I PG ++ V K K +P R G+ E G +
Sbjct: 174 GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF 233
Query: 176 LSLP 179
L+ P
Sbjct: 234 LATP 237
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 14/153 (9%)
Query: 321 KETFTRLIPLKRFGKP---EAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGV 377
+E++ RL + G +AV + ++ G+ G Y ATKA V
Sbjct: 100 RESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAV 159
Query: 378 EAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKV-----------KETFTRLIPFK 426
+ T+S + + GI N I PG ++ V K K +PF
Sbjct: 160 ISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFG 219
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G+ E++ + FLA+ + YI V GG
Sbjct: 220 RMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG 252
>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|B Chain B, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|C Chain C, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|D Chain D, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 365 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIP 424
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 286
Query: 425 -FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
++R E+ +V+ FL S ++ YITGT +KV GG
Sbjct: 287 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 103 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIP 162
+G + Y K +E T+S A+E+A IR N + PG + ++ +P V E +P
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 286
Query: 163 L 163
L
Sbjct: 287 L 287
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 270 MGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIP 329
+G + Y K +E T+S A+E+A IR N + PG + + +P V E +P
Sbjct: 229 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGHRSKVP 286
Query: 330 LKRFGKPEAVCKELV 344
L + A ++V
Sbjct: 287 LYQRDSSAAEVSDVV 301
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
++ +DV++ I + + ++ R +VLVN AG T+ F + TE++ + +F++++ G
Sbjct: 55 AISLDVTDGERIDVVAADVLARYGRV-DVLVNNAGRTQVGAFEETTERELRDLFELHVFG 113
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+++A+ + E + GQ+ G S Y+ATKA +E ++ +A E+A F
Sbjct: 114 PARLTRALLPQXRE-RGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPF 172
Query: 297 GIRCNVILPGFIETPM 312
GI+ ++ PG T +
Sbjct: 173 GIKVLIVEPGAFRTNL 188
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
++ +DV++ I + + ++ R +VLVN AG T+ F + TE++ + +F++++ G
Sbjct: 55 AISLDVTDGERIDVVAADVLARYGRV-DVLVNNAGRTQVGAFEETTERELRDLFELHVFG 113
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+++A+ + E + GQ+ G S Y+ATKA +E ++ +A E+A F
Sbjct: 114 PARLTRALLPQXRE-RGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPF 172
Query: 130 GIRCNVILPGFIETPM 145
GI+ ++ PG T +
Sbjct: 173 GIKVLIVEPGAFRTNL 188
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 407
GQ+ G S Y+ATKA +E ++ +A E+A FGI+ ++ PG T +
Sbjct: 141 GQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC--VPDKVKETF-------T 420
Y+ KA ++ +T++ A+++ GIR N I PG + T + +P++ + F
Sbjct: 162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK 221
Query: 421 RLIPFKRFGKPEEIGEVICFLASDR--SSYITGTLIKVTGG 459
+P G+P++I EVI FLA DR SSYI G + V GG
Sbjct: 222 ECVPAGVMGQPQDIAEVIAFLA-DRKTSSYIIGHQLVVDGG 261
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 15/178 (8%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGI----TRDNWFLKLTEKDFQQVFDV 232
S+ DV+ + +ST KF + ++LVN AG ++ + + + ++
Sbjct: 62 SVVADVTTDAGQDEILSTTLGKFGKL-DILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120
Query: 233 NLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAME 292
NL+ +++ L TK G Y+ KA ++ +T++ A++
Sbjct: 121 NLRSVIALTKKAVPHLSSTKGEIVNISSIAS-GLHATPDFPYYSIAKAAIDQYTRNTAID 179
Query: 293 MATFGIRCNVILPGFIETPMTTS--VPDKVKETF-------TRLIPLKRFGKPEAVCK 341
+ GIR N I PG + T ++ +P++ + F +P G+P+ + +
Sbjct: 180 LIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 237
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS--VPDKVKETF-------T 158
Y+ KA ++ +T++ A+++ GIR N I PG + T ++ +P++ + F
Sbjct: 162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK 221
Query: 159 RLIPLKRFGKPEGSSTHLSLPMDVSNTSTI 188
+P G+P+ + ++ D +S I
Sbjct: 222 ECVPAGVMGQPQDIAEVIAFLADRKTSSYI 251
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMT----------- 408
G + ++ +S Y A K GV TK A+E A GI CN I PG++ TP+
Sbjct: 145 GLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQK 204
Query: 409 -TCVPDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ +E P +F PE++G FL+S + +TGT + + GG
Sbjct: 205 GIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGG 256
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI + + + +NL F + A +++ +
Sbjct: 85 DILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALP-IMQKQGWGRIINIASA 143
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
G + ++ +S Y A K GV TK A+E A GI CN I PG++ TP++
Sbjct: 144 HGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLV 193
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI + + + +NL F + A +++ +
Sbjct: 85 DILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALP-IMQKQGWGRIINIASA 143
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
G + ++ +S Y A K GV TK A+E A GI CN I PG++ TP+ E
Sbjct: 144 HGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLV--------EK 195
Query: 324 FTRLIPLKRFGKPEAVCKELVETK 347
I ++ EA +EL+ K
Sbjct: 196 QIEAISQQKGIDIEAAARELLAEK 219
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 10/177 (5%)
Query: 141 IETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFS 200
++ PM S PD + ET ++ L R ++ +DV + + A+ +
Sbjct: 67 VKLPM--STPDDLAETVRQVEALGR--------RIIASQVDVRDFDAMQAAVDDGVTQLG 116
Query: 201 RPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXX 260
R VL N A + ++ K ++ + DVNL G ++ ++ ++ K
Sbjct: 117 RLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFT 176
Query: 261 XXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP 317
G G NY A+K G+ +++A+E+ IR N++ P + TPM + P
Sbjct: 177 SSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEP 233
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV + + A+ + R VL N A + ++ K ++ + DVNL G ++
Sbjct: 96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWI 155
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
++ ++ K G G NY A+K G+ +++A+E+ IR
Sbjct: 156 TARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIR 215
Query: 133 CNVILPGFIETPMITSVP 150
N++ P + TPM+ + P
Sbjct: 216 VNIVCPSSVATPMLLNEP 233
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 364 NMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD---------- 413
N+G NY A+K G+ +++A+E+ IR N++ P + TPM P
Sbjct: 187 NIG--NYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN 244
Query: 414 ------KVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+V ++P + +P +I I FL SD + YITG + V GG
Sbjct: 245 PTVEDFQVASRQMHVLPIP-YVEPADISNAILFLVSDDARYITGVSLPVDGG 295
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 361 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP------MTTCVPDK 414
+ G+ G S Y+A+KA + +F +A E+ GIR N + PGFI+TP +T +
Sbjct: 143 EGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAE 202
Query: 415 VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
K + P KR G +E+ + FLA + +++ TG + V GGL
Sbjct: 203 FKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGL 247
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L D+++ + I+ + + + +N AG++ F +++E + + F VN KG
Sbjct: 58 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN-AGVSELEPFDQVSEASYDRQFAVNTKG 116
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
F Q + + E + G+ G S Y+A+KA + +F +A E+
Sbjct: 117 AFFTVQRLTPLIREGGSIVFTSSVAD---EGGHPGXSVYSASKAALVSFASVLAAELLPR 173
Query: 297 GIRCNVILPGFIETP------MTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
GIR N + PGFI+TP +T + + K + P KR G + V + ++
Sbjct: 174 GIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVL 227
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L D+++ + I+ +A + + +N AG++ F +++E + + F VN KG
Sbjct: 58 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN-AGVSELEPFDQVSEASYDRQFAVNTKG 116
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
F Q + + E + G+ G S Y+A+KA + +F +A E+
Sbjct: 117 AFFTVQRLTPLIREGGSIVFTSSVAD---EGGHPGXSVYSASKAALVSFASVLAAELLPR 173
Query: 130 GIRCNVILPGFIETPM--ITSVPDKVKETFTRL----IPLKRFGKPE 170
GIR N + PGFI+TP + + + + F L P KR G +
Sbjct: 174 GIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTAD 220
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 361 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP------MTTCVPDK 414
+ G+ G S Y+A+KA + +F +A E+ GIR N + PGFI+TP +T +
Sbjct: 142 EGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAE 201
Query: 415 VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
K + P KR G +E+ + FLA + +++ TG + V GGL
Sbjct: 202 FKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGL 246
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L D+++ + I+ + + + +N AG++ F +++E + + F VN KG
Sbjct: 57 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN-AGVSELEPFDQVSEASYDRQFAVNTKG 115
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
F Q + + E + G+ G S Y+A+KA + +F +A E+
Sbjct: 116 AFFTVQRLTPLIREGGSIVFTSSVAD---EGGHPGXSVYSASKAALVSFASVLAAELLPR 172
Query: 297 GIRCNVILPGFIETP------MTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
GIR N + PGFI+TP +T + + K + P KR G + V + ++
Sbjct: 173 GIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVL 226
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L D+++ + I+ +A + + +N AG++ F +++E + + F VN KG
Sbjct: 57 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN-AGVSELEPFDQVSEASYDRQFAVNTKG 115
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
F Q + + E + G+ G S Y+A+KA + +F +A E+
Sbjct: 116 AFFTVQRLTPLIREGGSIVFTSSVAD---EGGHPGXSVYSASKAALVSFASVLAAELLPR 172
Query: 130 GIRCNVILPGFIETPM--ITSVPDKVKETFTRL----IPLKRFGKPE 170
GIR N + PGFI+TP + + + + F L P KR G +
Sbjct: 173 GIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTAD 219
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--------DKVKETF--- 419
+A +AGV+ +S+A E A G+R N IL G +E+ D + T
Sbjct: 160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLA 219
Query: 420 -TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+ IP R GKP E I FLAS S+Y TG+ I V+GGL+
Sbjct: 220 RNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AG R + F + T++ + + + +A +L E++
Sbjct: 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQL-ESRADAAIVCVNSL 147
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP------ 317
+ +A +AGV+ +S+A E A G+R N IL G +E+
Sbjct: 148 LASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREER 207
Query: 318 --DKVKETF----TRLIPLKRFGKP 336
D + T + IPL R GKP
Sbjct: 208 ELDWAQWTAQLARNKQIPLGRLGKP 232
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AG R + F + T++ + + + +A +L E++
Sbjct: 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQL-ESRADAAIVCVNSL 147
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVP------ 150
+ +A +AGV+ +S+A E A G+R N IL G +E+
Sbjct: 148 LASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREER 207
Query: 151 --DKVKETF----TRLIPLKRFGKP 169
D + T + IPL R GKP
Sbjct: 208 ELDWAQWTAQLARNKQIPLGRLGKP 232
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP--MTTCVPDKVKE 417
G G S YAA+KA + +F ++ +++ GIR N + PG ET + D V++
Sbjct: 163 GSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQ 222
Query: 418 -----TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+P R G+ EE+ FLASD SS++TG + V GG A
Sbjct: 223 QGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 11/172 (6%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
+ + D +N + + +K + R + VN G + ++TE+ + FD N+K
Sbjct: 78 VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLP-LGEVTEEQYDDTFDRNVK 136
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G Q K L G G S YAA+KA + +F ++ +++
Sbjct: 137 GVLFTVQ---KALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193
Query: 296 FGIRCNVILPGFIETPMTTSVP--DKVKE-----TFTRLIPLKRFGKPEAVC 340
GIR N + PG ET + D V++ +P R G+ E V
Sbjct: 194 RGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVA 245
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + D +N + + +K + R + VN G + ++TE+ + FD N+K
Sbjct: 78 VGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLP-LGEVTEEQYDDTFDRNVK 136
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G Q K L G G S YAA+KA + +F ++ +++
Sbjct: 137 GVLFTVQ---KALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193
Query: 129 FGIRCNVILPGFIETPMITSVP--DKVKE-----TFTRLIPLKRFGKPE 170
GIR N + PG ET + + D V++ +P R G+ E
Sbjct: 194 RGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAE 242
>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
pdb|2DKN|B Chain B, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
Length = 255
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 364 NMGQSN--YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM--TTCVPDKVKETF 419
GQ++ YA +K V + ++ A G+R NV+ PG +ETP+ + + E+
Sbjct: 145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGEST 204
Query: 420 TRLI-PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
R + P R +P E+ E I FL ++S+I G+++ V GG+
Sbjct: 205 RRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGM 246
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 269 NMGQSN--YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM--TTSVPDKVKETF 324
GQ++ YA +K V + ++ A G+R NV+ PG +ETP+ + + E+
Sbjct: 145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGEST 204
Query: 325 TRLI-PLKRFGKPEAVCKEL 343
R + PL R +P V + +
Sbjct: 205 RRFVAPLGRGSEPREVAEAI 224
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 102 NMGQSN--YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI--TSVPDKVKETF 157
GQ++ YA +K V + ++ A G+R NV+ PG +ETP++ + + E+
Sbjct: 145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGEST 204
Query: 158 TRLI-PLKRFGKPE 170
R + PL R +P
Sbjct: 205 RRFVAPLGRGSEPR 218
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV-PDKVKET-FTRLIPFKR 427
Y +KAG+ TK +A E+ GIR N + P + T M V D+ K IP R
Sbjct: 171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGR 230
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
F P E+ + + +LASD +S I G I V GG
Sbjct: 231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGG 262
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+VLVN AGI+ + + F VNL+ L++ AV K +V
Sbjct: 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASA 159
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-PDKVKE 322
Y +KAG+ TK +A E+ GIR N + P + T M V D+ K
Sbjct: 160 AALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKS 219
Query: 323 T-FTRLIPLKRFGKPEAVCKELV 344
IPL RF P V +V
Sbjct: 220 APMIARIPLGRFAVPHEVSDAVV 242
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+VLVN AGI+ + + F VNL+ L++ AV K +V
Sbjct: 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASA 159
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV-PDKVKE 155
Y +KAG+ TK +A E+ GIR N + P + T M V D+ K
Sbjct: 160 AALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKS 219
Query: 156 T-FTRLIPLKRFGKPE 170
IPL RF P
Sbjct: 220 APMIARIPLGRFAVPH 235
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMTTCVPDKVKE 417
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP+ +P +
Sbjct: 145 GFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA 204
Query: 418 TFTRL-IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R P G+P +I + +LAS+ S + TG+ V GG
Sbjct: 205 MSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 30 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX 89
EK P + LVN AGI + + T +++++ VNL G F ++ + +
Sbjct: 77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136
Query: 90 XXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMIT 147
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP++
Sbjct: 137 IINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
Query: 148 SVPDKVKETFTRL-IPLKRFGKP 169
+P + R P+ G+P
Sbjct: 197 DLPGAEEAMSQRTKTPMGHIGEP 219
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 197 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX 256
EK P + LVN AGI + + T +++++ VNL G F ++ + +
Sbjct: 77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136
Query: 257 XXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMTT 314
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP+
Sbjct: 137 IINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
Query: 315 SVPDKVKETFTRL-IPLKRFGKPEAVC 340
+P + R P+ G+P +
Sbjct: 197 DLPGAEEAMSQRTKTPMGHIGEPNDIA 223
>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
Length = 259
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM-TTCVPDKVKETFTR 421
G G YA +K V FT+ +A E+ IR N + PG I T T +V+E
Sbjct: 151 GGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVCPGMISTTFHDTFTKPEVRERVAG 209
Query: 422 LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
KR G E++ ++ FLASD ++Y+TG + GG+
Sbjct: 210 ATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 4/163 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ D++N + + A+SA +KF ++ G+ ++ E + QV DVNL
Sbjct: 61 LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
FL ++ ++ + G G G YA +K V FT+ +A E+
Sbjct: 121 SLFLTAKTALPKMAKGGAIVTFSSQAGRDG--GGPGALAYATSKGAVMTFTRGLAKEVGP 178
Query: 129 FGIRCNVILPGFIETPMI-TSVPDKVKETFTRLIPLKRFGKPE 170
IR N + PG I T T +V+E LKR G E
Sbjct: 179 -KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSE 220
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L++ D++N + + A+S +KF ++ G+ ++ E + QV DVNL
Sbjct: 61 LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
FL ++ ++ + G G G YA +K V FT+ +A E+
Sbjct: 121 SLFLTAKTALPKMAKGGAIVTFSSQAGRDG--GGPGALAYATSKGAVMTFTRGLAKEVGP 178
Query: 296 FGIRCNVILPGFIETPM-TTSVPDKVKETFTRLIPLKRFGKPEAVC 340
IR N + PG I T T +V+E LKR G E V
Sbjct: 179 -KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVA 223
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMTTCVPDKVKE 417
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP+ +P +
Sbjct: 145 GFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA 204
Query: 418 TFTRL-IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R P G+P +I + +LAS+ S + TG+ V GG
Sbjct: 205 MSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 30 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX 89
EK P + LVN AGI + + T +++++ VNL G F ++ + +
Sbjct: 77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136
Query: 90 XXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMIT 147
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP++
Sbjct: 137 IINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
Query: 148 SVPDKVKETFTRL-IPLKRFGKP 169
+P + R P+ G+P
Sbjct: 197 DLPGAEEAMSQRTKTPMGHIGEP 219
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 197 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX 256
EK P + LVN AGI + + T +++++ VNL G F ++ + +
Sbjct: 77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGAS 136
Query: 257 XXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA--TFGIRCNVILPGFIETPMTT 314
G +G+ Y A+K V +KS A++ A + +R N + PG+I+TP+
Sbjct: 137 IINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
Query: 315 SVPDKVKETFTRL-IPLKRFGKPEAVC 340
+P + R P+ G+P +
Sbjct: 197 DLPGAEEAMSQRTKTPMGHIGEPNDIA 223
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV++ + +A+ EK +VLVN AGI + L++TE+D +Q++ VN+ F
Sbjct: 60 LDVTDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 73 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
QA ++ E G S Y+ TK V T++ A E+A G
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHL---SLPMDVS 183
N PG + T M + ++ + + P+ K SS L S+P DV+
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGK--PIGENFKEYSSSIALGRPSVPEDVA 230
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV++ + +A+ EK +VLVN AGI + L++TE+D +Q++ VN+ F
Sbjct: 60 LDVTDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 240 VSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
QA ++ E G S Y+ TK V T++ A E+A G
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 300 CNVILPGFIETPMTTSV 316
N PG + T M +
Sbjct: 179 VNAYAPGIVGTGMWEQI 195
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKET--------- 418
S Y+ TK V T++ A E+A G N PG + T M + ++ +
Sbjct: 152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENF 211
Query: 419 --FTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
++ I R PE++ ++ FLAS+ S+Y+TG ++ V GG+
Sbjct: 212 KEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM 255
>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|B Chain B, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|C Chain C, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|D Chain D, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRF- 428
Y K + T++ A+E+A IR N + PG P P + +E + R +P +
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAX--PQETQEEYRRKVPLGQSE 239
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+I + I FL S + YITGT +KV GGL
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFG 167
Y K + T++ A+E+A IR N + PG P + P + +E + R +PL G
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAXPQETQEEYRRKVPL---G 236
Query: 168 KPEGSSTHLS 177
+ E S+ ++
Sbjct: 237 QSEASAAQIA 246
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFG 334
Y K + T++ A+E+A IR N + PG P + P + +E + R +PL G
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAXPQETQEEYRRKVPL---G 236
Query: 335 KPEAVCKELVET 346
+ EA ++ +
Sbjct: 237 QSEASAAQIADA 248
>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|B Chain B, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|C Chain C, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|D Chain D, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|E Chain E, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|F Chain F, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|G Chain G, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|H Chain H, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFK 426
Q+ Y KA KS+A+E A F R N I PG+I+T +T +K + +L P
Sbjct: 184 QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLG 242
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
R G +E+ +LAS+ S++ TG+ + + GG
Sbjct: 243 REGLTQELVGGYLYLASNASTFTTGSDVVIDGGY 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 226 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQ--SNYAATKAGVE 283
+ ++ V+L G + S + K + + G++ N+ Q + Y KA
Sbjct: 137 WNKIISVDLNGVYYCSHNIGK-IFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACT 195
Query: 284 AFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKEL 343
KS+A+E A F R N I PG+I+T +T +K + +L PL R E + +EL
Sbjct: 196 HLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGR----EGLTQEL 250
Query: 344 V 344
V
Sbjct: 251 V 251
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 59 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQ--SNYAATKAGVE 116
+ ++ V+L G + S + K + + G++ N+ Q + Y KA
Sbjct: 137 WNKIISVDLNGVYYCSHNIGK-IFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACT 195
Query: 117 AFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE---GSS 173
KS+A+E A F R N I PG+I+T + +K + +L PL R G + G
Sbjct: 196 HLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGY 254
Query: 174 THLSLPMDVSNTSTISTAMSTI 195
+L+ SN ST +T +
Sbjct: 255 LYLA-----SNASTFTTGSDVV 271
>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|B Chain B, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|C Chain C, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|D Chain D, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRF- 428
Y K + T++ A+E+A IR N + PG P +P + +E + R +P +
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSE 239
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+I + I FL S + YITGT +KV GGL
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFG 167
Y K + T++ A+E+A IR N + PG P ++P + +E + R +PL G
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPL---G 236
Query: 168 KPEGSSTHLS 177
+ E S+ ++
Sbjct: 237 QSEASAAQIA 246
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFG 334
Y K + T++ A+E+A IR N + PG P ++P + +E + R +PL G
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPL---G 236
Query: 335 KPEAVCKELVET 346
+ EA ++ +
Sbjct: 237 QSEASAAQIADA 248
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV----PDKVKETFTRLIPF 425
Y ATK V + TK++A+E+A IR + P ETP+ T +++++ F IP
Sbjct: 160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM 219
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R KP+++ E FL S ++S ITG + V GG
Sbjct: 220 GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG 253
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE-KDFQQVFDVNL 67
L++ D+S + + A+ A KF + ++LVN AGI +L E ++F ++ VN+
Sbjct: 58 LAVAADISKEADVDAAVEAALSKFGKV-DILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAM 124
+G +L++ + E + N Y ATK V + TK++A+
Sbjct: 117 RGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 125 EMATFGIRCNVILPGFIETPMITSV----PDKVKETFTRLIPLKRFGKPE 170
E+A IR + P ETP++T+ +++++ F IP+ R KP+
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD 226
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE-KDFQQVFDVNL 234
L++ D+S + + A+ KF + ++LVN AGI +L E ++F ++ VN+
Sbjct: 58 LAVAADISKEADVDAAVEAALSKFGKV-DILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116
Query: 235 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAM 291
+G +L++ + E + N Y ATK V + TK++A+
Sbjct: 117 RGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 292 EMATFGIRCNVILPGFIETPMTTSV----PDKVKETFTRLIPLKRFGKPEAVCK 341
E+A IR + P ETP+ T+ +++++ F IP+ R KP+ + +
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAE 230
>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3SVT|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKR 427
Y TK+ V+ + A E+ +R N I PG I T + + + ++ + P R
Sbjct: 164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPR 223
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G+ E++ + FL SD +S++TG +I V GG
Sbjct: 224 QGEVEDVANMAMFLLSDAASFVTGQVINVDGG 255
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLK 68
P D++N + A+ A+ R V V+CAG + + +T+ D +++ D+N+
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGV-VHCAGGSEN--IGPITQVDSEAWRRTVDLNVN 125
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN-------YAATKAGVEAFTKS 121
GT V + +E+V VG + ++ SN Y TK+ V+ +
Sbjct: 126 GTMYVLKHAAREMVRGGGGSF-------VG-ISSIAASNTHRWFGAYGVTKSAVDHLMQL 177
Query: 122 VAMEMATFGIRCNVILPGFIETPMITSVPD--KVKETFTRLIPLKRFGKPE 170
A E+ +R N I PG I T ++ ++ + ++ + PL R G+ E
Sbjct: 178 AADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE 228
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 179 PMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLK 235
P D++N + A+ + R V V+CAG + + +T+ D +++ D+N+
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGV-VHCAGGSEN--IGPITQVDSEAWRRTVDLNVN 125
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN-------YAATKAGVEAFTKS 288
GT V + +E+V VG + ++ SN Y TK+ V+ +
Sbjct: 126 GTMYVLKHAAREMVRGGGGSF-------VG-ISSIAASNTHRWFGAYGVTKSAVDHLMQL 177
Query: 289 VAMEMATFGIRCNVILPGFIETPMTTSVPD--KVKETFTRLIPLKRFGKPEAVCK 341
A E+ +R N I PG I T + ++ + ++ + PL R G+ E V
Sbjct: 178 AADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN 232
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC--VPDKVKE 417
G + G YA KA ++ +T+ A+++ G+R N + PG + T +P+ +
Sbjct: 170 GPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASD 229
Query: 418 TFTRL-------IPFKRFGKPEEIGEVICFLASDR--SSYITGTLIKVTGG 459
IP GKPEEI +I FLA DR SSYI G I GG
Sbjct: 230 KLYSFIGSRKECIPVGHCGKPEEIANIIVFLA-DRNLSSYIIGQSIVADGG 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE--KDFQQVFDVNLKGTF 238
DV+ S ++T KF + ++LVN AG + + + +Q+ F +N +
Sbjct: 86 DVTEASGQDDIINTTLAKFGKI-DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++Q + L++TK G + G YA KA ++ +T+ A+++ G+
Sbjct: 145 EMTQKTKEHLIKTKGEIVNVSSIV-AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 203
Query: 299 RCNVILPGFIET--------PMTTSVPDKVKE---TFTRLIPLKRFGKPEAVCKELV 344
R N + PG + T P T S DK+ + IP+ GKPE + +V
Sbjct: 204 RVNSVSPGAVATGFMGAMGLPETAS--DKLYSFIGSRKECIPVGHCGKPEEIANIIV 258
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE--KDFQQVFDVNLKGTF 71
DV+ S ++ KF + ++LVN AG + + + +Q+ F +N +
Sbjct: 86 DVTEASGQDDIINTTLAKFGKI-DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++Q + L++TK G + G YA KA ++ +T+ A+++ G+
Sbjct: 145 EMTQKTKEHLIKTKGEIVNVSSIV-AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 203
Query: 132 RCNVILPGFIETPMITS--VPDKVKETFTRL-------IPLKRFGKPE 170
R N + PG + T + + +P+ + IP+ GKPE
Sbjct: 204 RVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE 251
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 316 VPDKVKETFTRLIPLK---RFGKPEAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 372
V D + F R++ + F +AV ++++ T+ G G + Y
Sbjct: 101 VQDYPSDDFARVLTINVTGAFHVLKAVSRQMI-TQNYGRIVNTASMAGVKGPPNMAAYGT 159
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGF----------------IETPMTTCVPDKVK 416
+K + A T++ A+++A + IR N I PG+ + + + P V
Sbjct: 160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA 219
Query: 417 ETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ +P +R+G EI V+ FL D SS++TG + + GG
Sbjct: 220 QQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 58 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 117
DF +V +N+ G F V +AV ++++ T+ G G + Y +K + A
Sbjct: 108 DFARVLTINVTGAFHVLKAVSRQMI-TQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA 166
Query: 118 FTKSVAMEMATFGIRCNVILPGF----------------IETPMITSVPDKVKETFTRLI 161
T++ A+++A + IR N I PG+ + + ++ P V + +
Sbjct: 167 LTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226
Query: 162 PLKRFG 167
P++R+G
Sbjct: 227 PMRRYG 232
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 225 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 284
DF +V +N+ G F V +AV ++++ T+ G G + Y +K + A
Sbjct: 108 DFARVLTINVTGAFHVLKAVSRQMI-TQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA 166
Query: 285 FTKSVAMEMATFGIRCNVILPGF----------------IETPMTTSVPDKVKETFTRLI 328
T++ A+++A + IR N I PG+ + + ++ P V + +
Sbjct: 167 LTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226
Query: 329 PLKRFG 334
P++R+G
Sbjct: 227 PMRRYG 232
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 168 KPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQ 227
+ EG+ T ++ D+S+ + + + I E++ + LVN AG+ R LTE+DF
Sbjct: 54 RAEGALTD-TITADISDMADVRRLTTHIVERYGHI-DCLVNNAGVGRFGALSDLTEEDFD 111
Query: 228 QVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTK 287
+ NLKGTF ++QA+ L+E + S Y +K G +
Sbjct: 112 YTMNTNLKGTFFLTQALFA-LMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVE 170
Query: 288 SVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK 321
++ + +R + PG + TPM V D+++
Sbjct: 171 TMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ 204
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
D+S+ + + + I E++ + LVN AG+ R LTE+DF + NLKGTF +
Sbjct: 66 DISDMADVRRLTTHIVERYGHI-DCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRC 133
+QA+ L+E + S Y +K G +++ + +R
Sbjct: 125 TQALFA-LMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 183
Query: 134 NVILPGFIETPMITSVPDKVK 154
+ PG + TPM V D+++
Sbjct: 184 TDVQPGAVYTPMWGKVDDEMQ 204
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 365 MGQSNYA--ATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFT 420
MG+ YA +KA + ++ +A E+ I NVI PG + MT + + + E +
Sbjct: 175 MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADS 234
Query: 421 RLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
IP R+G+PEE+ + LA +Y+TG +I + GG
Sbjct: 235 ASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
++P D+S+ + + E +R ++LVN AG + +++V +N+
Sbjct: 81 AIPADLSSEAGARRLAQALGELSARL-DILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139
Query: 237 TFLVSQAVCKELVETKXXX--XXXXXXXXVGQMGNMGQSNYA--ATKAGVEAFTKSVAME 292
F Q + L + V + MG+ YA +KA + ++ +A E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199
Query: 293 MATFGIRCNVILPGFIETPMTTSVPD--KVKETFTRLIPLKRFGKPE 337
+ I NVI PG + MT + + + E + IP+ R+G+PE
Sbjct: 200 LVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPE 246
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
++P D+S+ + A+ E +R ++LVN AG + +++V +N+
Sbjct: 81 AIPADLSSEAGARRLAQALGELSARL-DILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139
Query: 70 TFLVSQAVCKELVETKXXX--XXXXXXXXVGQMGNMGQSNYA--ATKAGVEAFTKSVAME 125
F Q + L + V + MG+ YA +KA + ++ +A E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199
Query: 126 MATFGIRCNVILPGFIETPMITSVPD--KVKETFTRLIPLKRFGKPE 170
+ I NVI PG + M + + + E + IP+ R+G+PE
Sbjct: 200 LVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPE 246
>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|B Chain B, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|C Chain C, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|D Chain D, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|E Chain E, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|F Chain F, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|G Chain G, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|H Chain H, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
Length = 244
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD-----KVKETFTRLIP 424
Y +A A +S A ++ GI I P F P D +++E R +P
Sbjct: 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP 206
Query: 425 FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G+P+E+G +I FLAS R++ I G TGG
Sbjct: 207 LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPD-----KVKETFTRLIP 162
Y +A A +S A ++ GI I P F P D +++E R +P
Sbjct: 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP 206
Query: 163 LKRFGKPE 170
L R G+P+
Sbjct: 207 LGRLGRPD 214
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPD-----KVKETFTRLIP 329
Y +A A +S A ++ GI I P F P D +++E R +P
Sbjct: 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP 206
Query: 330 LKRFGKPE 337
L R G+P+
Sbjct: 207 LGRLGRPD 214
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 51 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 110
L+ +DF++V D+N+ G FLV++ + ++ K G Y A
Sbjct: 110 ILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 169
Query: 111 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV 149
TK V T S+ E+ +GIR N + P + +P++T V
Sbjct: 170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV 208
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 218 FLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 277
L+ +DF++V D+N+ G FLV++ + ++ K G Y A
Sbjct: 110 ILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 169
Query: 278 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV 316
TK V T S+ E+ +GIR N + P + +P+ T V
Sbjct: 170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV 208
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV----PDKVKETFTRLIPF 425
Y ATK V T S+ E+ +GIR N + P + +P+ T V +V+E +
Sbjct: 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL 226
Query: 426 K-RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
K + E++ + + +LA D S Y++G + + GG
Sbjct: 227 KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG 261
>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|B Chain B, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|C Chain C, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|D Chain D, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H16|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P6422
Length = 261
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 380 FTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKV-KETFTRL-------------IPF 425
++K+ + E++ G+R + PG+IET + + +++ K+ T L IP
Sbjct: 163 YSKAXSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPL 222
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R KPEE+ +I FLASDR++ ITG + GG
Sbjct: 223 GRPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKV-KETFTRL-------------IPL 330
++K+ + E++ G+R + PG+IET + + +++ K+ T L IPL
Sbjct: 163 YSKAXSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPL 222
Query: 331 KRFGKPEAVC 340
R KPE V
Sbjct: 223 GRPAKPEEVA 232
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPF 425
G S Y+A+KA + TK +A ++ GI N++ PG +T D + R I
Sbjct: 176 GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQRER-IAT 234
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+G+P++I ++ +LA + ++TG + + GG
Sbjct: 235 GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AGI + T DF +V VN + F+ ++ + L +
Sbjct: 111 DILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE 170
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKET 323
+ + G S Y+A+KA + TK +A ++ GI N++ PG +T + D +
Sbjct: 171 L--VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQ 228
Query: 324 FTRLIPLKRFGKPEAVC 340
R I +G+P+ +
Sbjct: 229 RER-IATGSYGEPQDIA 244
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AGI + T DF +V VN + F+ ++ + L +
Sbjct: 111 DILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE 170
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVKET 156
+ + G S Y+A+KA + TK +A ++ GI N++ PG +T + D +
Sbjct: 171 L--VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDHAEAQ 228
Query: 157 FTRLIPLKRFGKPE 170
R I +G+P+
Sbjct: 229 RER-IATGSYGEPQ 241
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 368 SNYAATKAGVEAFTKSVAM--EMATFGIRCNVILPGFIETPM-TTCVPDKVKETFTRLIP 424
+ Y+A+KA V A T++ A+ + IR N I P I TPM +P V + P
Sbjct: 149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP 208
Query: 425 -FKRFGK---PEEIGEVICFLASDRSSYITGT 452
R G+ PE I +++ FLASD SS ++G+
Sbjct: 209 KLNRAGRAYMPERIAQLVLFLASDESSVMSGS 240
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 363 GNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------TTCVPD-KV 415
G S Y A+K A T+ A+ + G+R N ++P + TP+ T P+ K+
Sbjct: 146 GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKL 205
Query: 416 KETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
E ++ +RF P+EI + FL S R+S+ TG + V GG
Sbjct: 206 AEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG 249
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 11/174 (6%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 237
LP+++ + + A++ F R + LVN AG+ D L F + NL
Sbjct: 60 LPVELQDDAQCRDAVAQTIATFGRL-DGLVNNAGVN-DGIGLDAGRDAFVASLERNLIHY 117
Query: 238 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 297
+ ++ L T+ V GN S Y A+K A T+ A+ + G
Sbjct: 118 YAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--SGYCASKGAQLALTREWAVALREHG 175
Query: 298 IRCNVILPGFIETPM------TTSVPDKVKETFTRLIPL-KRFGKPEAVCKELV 344
+R N ++P + TP+ T P+ +PL +RF P+ + V
Sbjct: 176 VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAV 229
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGT 70
LP+++ + + A++ F R + LVN AG+ D L F + NL
Sbjct: 60 LPVELQDDAQCRDAVAQTIATFGRL-DGLVNNAGVN-DGIGLDAGRDAFVASLERNLIHY 117
Query: 71 FLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFG 130
+ ++ L T+ V GN S Y A+K A T+ A+ + G
Sbjct: 118 YAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--SGYCASKGAQLALTREWAVALREHG 175
Query: 131 IRCNVILPGFIETPM----ITSVPD---KVKETFTRLIPL-KRFGKPE 170
+R N ++P + TP+ I + D K+ E + +PL +RF P+
Sbjct: 176 VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK-VPLGRRFTTPD 222
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKV------------KE 417
Y TKA + F+K++A E+ IR N I PG I TP ++ +
Sbjct: 157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQS 216
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P KRF PEE+ FL S+R++Y G+ V GG+
Sbjct: 217 VADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM 259
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L + +DV+ + + +++ F ++LVN AG + ++ ++ +Q +++++
Sbjct: 60 LEVAVDVATPEGVDAVVESVRSSFG-GADILVNNAGTGSNETIMEAADEKWQFYWELHVM 118
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
+++ + + + + Y TKA + F+K++A E+
Sbjct: 119 AAVRLARGLVPGM-RARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 129 FGIRCNVILPGFIETP-MITSVPDKVKET-----------FTRLIPLKRFGKPE 170
IR N I PG I TP I + + K+ P+KRF PE
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE 231
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L + +DV+ + + +++ F ++LVN AG + ++ ++ +Q +++++
Sbjct: 60 LEVAVDVATPEGVDAVVESVRSSFG-GADILVNNAGTGSNETIMEAADEKWQFYWELHVM 118
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
+++ + + + + Y TKA + F+K++A E+
Sbjct: 119 AAVRLARGLVPGM-RARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 296 FGIRCNVILPGFIETPMTTSVPDK------------VKETFTRLIPLKRFGKPE 337
IR N I PG I TP + ++ P+KRF PE
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE 231
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKV------------KE 417
Y TKA + F+K++A E+ IR N I PG I TP ++ +
Sbjct: 157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQS 216
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P KRF PEE+ FL S+R++Y G+ V GG+
Sbjct: 217 VADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM 259
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L + +DV+ + + +++ F ++LVN AG + ++ ++ +Q +++ +
Sbjct: 60 LEVAVDVATPEGVDAVVESVRSSFG-GADILVNNAGTGSNETIMEAADEKWQFYWELLVM 118
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
+++ + + + + Y TKA + F+K++A E+
Sbjct: 119 AAVRLARGLVPGM-RARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 129 FGIRCNVILPGFIETP-MITSVPDKVKET-----------FTRLIPLKRFGKPE 170
IR N I PG I TP I + + K+ P+KRF PE
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE 231
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 14/174 (8%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L + +DV+ + + +++ F ++LVN AG + ++ ++ +Q +++ +
Sbjct: 60 LEVAVDVATPEGVDAVVESVRSSFG-GADILVNNAGTGSNETIMEAADEKWQFYWELLVM 118
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
+++ + + + + Y TKA + F+K++A E+
Sbjct: 119 AAVRLARGLVPGM-RARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 296 FGIRCNVILPGFIETPMTTSVPDK------------VKETFTRLIPLKRFGKPE 337
IR N I PG I TP + ++ P+KRF PE
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE 231
>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FJH|B Chain B, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|A Chain A, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|B Chain B, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
Length = 257
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 361 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTC-VPD-KVKET 418
Q GN+ YA +K + + A G+R N I PG ETP+ + D + E+
Sbjct: 149 QGGNLA---YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGES 205
Query: 419 FTRLIP-FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ +P R +P E+ VI FL S +SY+ G I + GG+
Sbjct: 206 IAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 99 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS-VPD-KVKET 156
Q GN+ YA +K + + A G+R N I PG ETP++ + + D + E+
Sbjct: 149 QGGNLA---YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGES 205
Query: 157 FTRLI-PLKRFGKP 169
+ + P+ R +P
Sbjct: 206 IAKFVPPMGRRAEP 219
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 266 QMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP-MTTSVPD-KVKET 323
Q GN+ YA +K + + A G+R N I PG ETP + + D + E+
Sbjct: 149 QGGNLA---YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGES 205
Query: 324 FTRLI-PLKRFGKP 336
+ + P+ R +P
Sbjct: 206 IAKFVPPMGRRAEP 219
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 362 MGNMGQS---NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFI---ETPMTTCVPDKV 415
+GN GQ+ + + KA V+A T+ +A+E IR N + PG I E P
Sbjct: 166 LGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQAS 225
Query: 416 KETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
T P +R G EI + +LAS +SY+TG ++ GG
Sbjct: 226 LSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG 269
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Query: 133 CNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAM 192
C I G ++T + S P+ + ET + R ++ +DV + + A+
Sbjct: 44 CKPIRAGVVDTAIPASTPEDLAETADLVKGHNR--------RIVTAEVDVRDYDALKAAV 95
Query: 193 STIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNLKGTFLVSQAVCKELVET 251
+ E+ R +++V AGI L K +E+D+ ++ D+NL G + +A ++
Sbjct: 96 DSGVEQLGRL-DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAG 154
Query: 252 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 311
G +Y A K GV ++ +E+ IR N + P ++TP
Sbjct: 155 GRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTP 214
Query: 312 M 312
M
Sbjct: 215 M 215
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNLKGTF 71
+DV + + A+ + E+ R +++V AGI L K +E+D+ ++ D+NL G +
Sbjct: 83 VDVRDYDALKAAVDSGVEQLGRL-DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
+A ++ G +Y A K GV ++ +E+ I
Sbjct: 142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMI 201
Query: 132 RCNVILPGFIETPMI 146
R N + P ++TPM+
Sbjct: 202 RVNSVHPTHVKTPML 216
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM--------------TTCVPD 413
+Y A K GV ++ +E+ IR N + P ++TPM PD
Sbjct: 176 GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPD 235
Query: 414 KVK---ETFTRL-IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ + F L IP+ +P +I + F ASD + YITG + + G
Sbjct: 236 DMAPICQMFHTLPIPWV---EPIDISNAVLFFASDEARYITGVTLPIDAG 282
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP-----MTTCVPDKVKETFTR-- 421
+Y A+K V ++ A E+ IR N + PG + TP M T V + ET +
Sbjct: 173 HYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAV-GQAMETNPQLS 231
Query: 422 --LIPF--KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
L PF +PE+I + +C+LASD S +T I V G
Sbjct: 232 HVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+++V AG+ + +T +DF+ V D+N+ GT+ A ++E
Sbjct: 103 DIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA 162
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 145
G +Y A+K V ++ A E+ IR N + PG + TPM
Sbjct: 163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+++V AG+ + +T +DF+ V D+N+ GT+ A ++E
Sbjct: 103 DIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA 162
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
G +Y A+K V ++ A E+ IR N + PG + TPM
Sbjct: 163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ H+ L +DV++ + A+++ E ++LVN AGI D+ ++
Sbjct: 55 GAKVHV-LELDVADRQGVDAAVASTVEALG-GLDILVNNAGIMLLGPVEDADTTDWTRMI 112
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
D NL G +++A L+ +K G++ + Y ATK GV AF++++
Sbjct: 113 DTNLLGLMYMTRAALPHLLRSKGTVVQMSSIA--GRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 291 MEMATFGIRCNVILPGFIETPM 312
E+ G+R VI PG +T +
Sbjct: 171 QEVTERGVRVVVIEPGTTDTEL 192
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+ H+ L +DV++ + A+++ E ++LVN AGI D+ ++
Sbjct: 55 GAKVHV-LELDVADRQGVDAAVASTVEALG-GLDILVNNAGIMLLGPVEDADTTDWTRMI 112
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
D NL G +++A L+ +K G++ + Y ATK GV AF++++
Sbjct: 113 DTNLLGLMYMTRAALPHLLRSKGTVVQMSSIA--GRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 124 MEMATFGIRCNVILPGFIETPM 145
E+ G+R VI PG +T +
Sbjct: 171 QEVTERGVRVVVIEPGTTDTEL 192
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 277 ATKAGVEAFTKSVAMEMATFGIRCN---VILPGFIETPMTTSVPDKVKETFTRLIPLKRF 333
A + GV+A S + I N ++L G +E TT +TR+I
Sbjct: 66 ADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTD--------WTRMIDTNLL 117
Query: 334 G---KPEAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 390
G A L+ +K G++ + Y ATK GV AF++++ E+
Sbjct: 118 GLMYMTRAALPHLLRSKGTVVQMSSIA--GRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 391 FGIRCNVILPGFIETPMTTCVPD-KVKETFTRLIPFKRFGKPEEIGEVICF 440
G+R VI PG +T + + KE + + I R + ++I E + +
Sbjct: 176 RGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRY 226
>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFM|B Chain B, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFN|B Chain B, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|A Chain A, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|C Chain C, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|D Chain D, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
Length = 258
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 378 EAFTKSVAMEMATF----GIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKPEE 433
+AF +V F G+R N++ PG ++T V++ + IP RFG EE
Sbjct: 168 KAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEE 227
Query: 434 IGEVICFLASDRSS-YITGTLIKVTGG 459
+ F AS +S YITG ++ + GG
Sbjct: 228 MAPAFLFFASHLASGYITGQVLDINGG 254
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 283 EAFTKSVAMEMATF----GIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPE 337
+AF +V F G+R N++ PG ++T V++ + IP+ RFG E
Sbjct: 168 KAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAE 226
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 116 EAFTKSVAMEMATF----GIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
+AF +V F G+R N++ PG ++T V++ + IP+ RFG E
Sbjct: 168 KAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAE 226
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ H+ L +DV++ + A+++ E ++LVN AGI D+ +
Sbjct: 55 GAKVHV-LELDVADRQGVDAAVASTVEALG-GLDILVNNAGIXLLGPVEDADTTDWTRXI 112
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
D NL G ++A L+ +K G++ + Y ATK GV AF++++
Sbjct: 113 DTNLLGLXYXTRAALPHLLRSKGTVVQXSSI--AGRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 291 MEMATFGIRCNVILPGFIETPMTTSVPD-KVKETFTRLIPLKR 332
E+ G+R VI PG +T + + KE + + I R
Sbjct: 171 QEVTERGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIR 213
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+ H+ L +DV++ + A+++ E ++LVN AGI D+ +
Sbjct: 55 GAKVHV-LELDVADRQGVDAAVASTVEALG-GLDILVNNAGIXLLGPVEDADTTDWTRXI 112
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
D NL G ++A L+ +K G++ + Y ATK GV AF++++
Sbjct: 113 DTNLLGLXYXTRAALPHLLRSKGTVVQXSSI--AGRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 124 MEMATFGIRCNVILPGFIETPM 145
E+ G+R VI PG +T +
Sbjct: 171 QEVTERGVRVVVIEPGTTDTEL 192
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 17/171 (9%)
Query: 277 ATKAGVEAFTKSVAMEMATFGIRCN---VILPGFIETPMTTSVPDKVKETFTRLIPLKRF 333
A + GV+A S + I N + L G +E TT +TR I
Sbjct: 66 ADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTD--------WTRXIDTNLL 117
Query: 334 G---KPEAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 390
G A L+ +K G++ + Y ATK GV AF++++ E+
Sbjct: 118 GLXYXTRAALPHLLRSKGTVVQXSSI--AGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 391 FGIRCNVILPGFIETPMTTCVPD-KVKETFTRLIPFKRFGKPEEIGEVICF 440
G+R VI PG +T + + KE + + I R + ++I E + +
Sbjct: 176 RGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQDIAEAVRY 226
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 380 FTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKPEEIGEVI 438
+++A ++ IR N I PG I T + + + ++++ + P +R G+P++I
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA 228
Query: 439 CFLASDRSSYITGTLIKVTGG 459
FL S +S+++G ++ V+GG
Sbjct: 229 LFLCSPAASWVSGQILTVSGG 249
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++LVN AG F + DF++ +++N+ F +SQ V E+ E
Sbjct: 90 DILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEM-EKNGGGVILTITSM 147
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV-PDKVKE 155
+ N+ ++YA++KA +++A ++ IR N I PG I T + SV ++++
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ 207
Query: 156 TFTRLIPLKRFGKPE 170
+ P++R G+P+
Sbjct: 208 KMLQHTPIRRLGQPQ 222
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++LVN AG F + DF++ +++N+ F +SQ V E+ E
Sbjct: 90 DILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEM-EKNGGGVILTITSM 147
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-PDKVKE 322
+ N+ ++YA++KA +++A ++ IR N I PG I T SV ++++
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ 207
Query: 323 TFTRLIPLKRFGKPEAVCK 341
+ P++R G+P+ +
Sbjct: 208 KMLQHTPIRRLGQPQDIAN 226
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV----PDKVKETFTRLIPF 425
YAATKA +S A + A + N + PG ++T P+ E L
Sbjct: 181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM 240
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
R G+PEE+ FLAS+ S++TG I +TGG
Sbjct: 241 GRAGRPEEMVGAALFLASEACSFMTGETIFLTGG 274
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 19/147 (12%)
Query: 202 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 261
P ++LV A + LT D VNL T + Q+ ++V K
Sbjct: 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGR------ 162
Query: 262 XXVGQMGNMGQ-------SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTT 314
V +G++ Q + YAATKA +S A + A + N + PG ++T
Sbjct: 163 --VVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA 220
Query: 315 SV----PDKVKETFTRLIPLKRFGKPE 337
P+ E L + R G+PE
Sbjct: 221 DRRAQDPEGWDEYVRTLNWMGRAGRPE 247
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 19/147 (12%)
Query: 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXX 94
P ++LV A + LT D VNL T + Q+ ++V K
Sbjct: 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGR------ 162
Query: 95 XXVGQMGNMGQ-------SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMIT 147
V +G++ Q + YAATKA +S A + A + N + PG ++T
Sbjct: 163 --VVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA 220
Query: 148 SV----PDKVKETFTRLIPLKRFGKPE 170
P+ E L + R G+PE
Sbjct: 221 DRRAQDPEGWDEYVRTLNWMGRAGRPE 247
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL- 67
L + DV++ + + + F R ++LVN AG+ EK++++ +NL
Sbjct: 61 LFIQCDVADQQQLRDTFRKVVDHFGRL-DILVNNAGVN--------NEKNWEKTLQINLV 111
Query: 68 ---KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAM 124
GT+L + K+ G M Q Y A+K G+ FT+S A+
Sbjct: 112 SVISGTYLGLDYMSKQ--NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169
Query: 125 --EMATFGIRCNVILPGFIETPMITSV 149
+ G+R N I PGF+ T ++ S+
Sbjct: 170 AANLMNSGVRLNAICPGFVNTAILESI 196
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL- 234
L + DV++ + + + F R ++LVN AG+ EK++++ +NL
Sbjct: 61 LFIQCDVADQQQLRDTFRKVVDHFGRL-DILVNNAGVN--------NEKNWEKTLQINLV 111
Query: 235 ---KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAM 291
GT+L + K+ G M Q Y A+K G+ FT+S A+
Sbjct: 112 SVISGTYLGLDYMSKQ--NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169
Query: 292 --EMATFGIRCNVILPGFIETPMTTSV 316
+ G+R N I PGF+ T + S+
Sbjct: 170 AANLMNSGVRLNAICPGFVNTAILESI 196
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 370 YAATKAGVEAFTKSVAM--EMATFGIRCNVILPGFIETPMTTCVPD--------KVKETF 419
Y A+K G+ FT+S A+ + G+R N I PGF+ T + + + K+
Sbjct: 153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI 212
Query: 420 TRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVT 457
+I + P I + L D + + G ++K+T
Sbjct: 213 KDMIKYYGILDPPLIANGLITLIEDDA--LNGAIMKIT 248
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV + ++S A+ A ++ R +++V AGI + + + V DVNL G +
Sbjct: 82 DVRDRESLSAALQAGLDELGRL-DIVVANAGIAP----MSAGDDGWHDVIDVNLTGVYHT 136
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMG----NMGQSNYAATKAGVEAFTKSVAMEMATF 129
+ LV+ G G + G Y A K GV + A +A
Sbjct: 137 IKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQ 196
Query: 130 GIRCNVILPGFIETPMITS 148
IR N I P +ETPMI +
Sbjct: 197 MIRVNSIHPSGVETPMINN 215
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 16/150 (10%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV + ++S A+ ++ R +++V AGI + + + V DVNL G +
Sbjct: 82 DVRDRESLSAALQAGLDELGRL-DIVVANAGIAP----MSAGDDGWHDVIDVNLTGVYHT 136
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMG----NMGQSNYAATKAGVEAFTKSVAMEMATF 296
+ LV+ G G + G Y A K GV + A +A
Sbjct: 137 IKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQ 196
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTR 326
IR N I P +ETPM + FTR
Sbjct: 197 MIRVNSIHPSGVETPM-------INNEFTR 219
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR---- 421
G Y A K GV + A +A IR N I P +ETPM + FTR
Sbjct: 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM-------INNEFTREWLA 223
Query: 422 --------------LIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+P + PE++ + +L SD++ YITG + V G
Sbjct: 224 KMAAATDTPGAMGNAMPVEVL-APEDVANAVAWLVSDQARYITGVTLPVDAG 274
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 379 AFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFK-----------R 427
A + +A+E+ IR N + PG IET ++ K++ IP + +
Sbjct: 189 AIVQQLALELGKHHIRVNAVCPGAIETNISDNT--KLRHEEETAIPVEWPKGQVPITDGQ 246
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
G+ E++ E+I FL S+R+ ++TG+ + + GG
Sbjct: 247 PGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNW--FLKLTEKDFQQVFDVN 233
++L DVS+ A+ + KF +++V AGI W L ++ + VN
Sbjct: 80 IALEADVSDELQXRNAVRDLVLKFGHL-DIVVANAGIN-GVWAPIDDLKPFEWDETIAVN 137
Query: 234 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQ-MGNMGQSNYAATKAGVEAFTKSVAME 292
L+GTFL L + + G + Y ATKA A + +A+E
Sbjct: 138 LRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALE 197
Query: 293 MATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLK 331
+ IR N + PG IET ++ + K++ IP++
Sbjct: 198 LGKHHIRVNAVCPGAIETNISDNT--KLRHEEETAIPVE 234
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 117 AFTKSVAMEMATFGIRCNVILPGFIET 143
A + +A+E+ IR N + PG IET
Sbjct: 189 AIVQQLALELGKHHIRVNAVCPGAIET 215
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L LP DV + A++A++E F + LVN AG+ +LT ++++ V D NL
Sbjct: 53 LPLPGDVREEGDWARAVAAMEEAFGEL-SALVNNAGVGVMKPVHELTLEEWRLVLDTNLT 111
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G FL + L+ + G+ G + Y A+K G+ + +++
Sbjct: 112 GAFLGIRHAVPALLR-RGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLRE 170
Query: 129 FGIRCNVILPGFIETPMITSVPDK 152
+R +LPG ++T + P +
Sbjct: 171 ANVRVVNVLPGSVDTGFAGNTPGQ 194
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L LP DV + A++ ++E F + LVN AG+ +LT ++++ V D NL
Sbjct: 53 LPLPGDVREEGDWARAVAAMEEAFGEL-SALVNNAGVGVMKPVHELTLEEWRLVLDTNLT 111
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G FL + L+ + G+ G + Y A+K G+ + +++
Sbjct: 112 GAFLGIRHAVPALLR-RGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLRE 170
Query: 296 FGIRCNVILPGFIETPMTTSVPDK 319
+R +LPG ++T + P +
Sbjct: 171 ANVRVVNVLPGSVDTGFAGNTPGQ 194
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 22/117 (18%)
Query: 361 QMGNMGQS---NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKE 417
Q G G++ Y ATKA V + T+S +++ I N I PG ++ D V
Sbjct: 143 QAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW----DGVDA 198
Query: 418 TFTRL---------------IPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
F R +PF R G E++ FLAS S YI V GG
Sbjct: 199 LFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLASAESDYIVSQTYNVDGG 255
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
++ DV+ +I A++A E + ++LVN A + +++T + ++++F +N+ G
Sbjct: 58 AVQXDVTRQDSIDAAIAATVEH-AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAG 116
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T QA ++ + G+ G + Y ATKA V + T+S +++
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
I N I PG ++ D V F R
Sbjct: 177 RINVNAIAPGVVDGEHW----DGVDALFAR 202
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
++ DV+ +I A++ E + ++LVN A + +++T + ++++F +N+ G
Sbjct: 58 AVQXDVTRQDSIDAAIAATVEH-AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAG 116
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
T QA ++ + G+ G + Y ATKA V + T+S +++
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTR 326
I N I PG ++ D V F R
Sbjct: 177 RINVNAIAPGVVDGEHW----DGVDALFAR 202
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVK-----ETFTR--- 421
Y+ K V+++T +A ++A IR NVI P + T M P + E +R
Sbjct: 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA 237
Query: 422 LIPFKR-------FGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
L+ F + + +I +CFLASD S Y+TG KV G
Sbjct: 238 LLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVP 150
Y+ K V+++T +A ++A IR NVI P + T M+ S P
Sbjct: 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP 220
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP 317
Y+ K V+++T +A ++A IR NVI P + T M S P
Sbjct: 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP 220
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD----KVKETFTRLI 423
++Y +TKA FT+++A ++ GI N I P + T T V + I
Sbjct: 152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAI 211
Query: 424 PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P R P ++ FLASD +S+ITG + V GG+
Sbjct: 212 P--RLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L++ DVS + + F R ++LVN AGI F +LT + +++ F++N+
Sbjct: 57 LTVKCDVSQPGDVEAFGKQVISTFGRC-DILVNNAGIYPLIPFDELTFEQWKKTFEINVD 115
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
FL+++A + + ++Y +TKA FT+++A ++
Sbjct: 116 SGFLMAKAFVPGMKRNGWGRIINLTSTTY-WLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 296 FGIRCNVILPGFIETPMTTS 315
GI N I P + T T +
Sbjct: 175 DGITVNAIAPSLVRTATTEA 194
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ DVS + + F R ++LVN AGI F +LT + +++ F++N+
Sbjct: 57 LTVKCDVSQPGDVEAFGKQVISTFGRC-DILVNNAGIYPLIPFDELTFEQWKKTFEINVD 115
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
FL+++A + + ++Y +TKA FT+++A ++
Sbjct: 116 SGFLMAKAFVPGMKRNGWGRIINLTSTTY-WLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 129 FGIRCNVILPGFIET 143
GI N I P + T
Sbjct: 175 DGITVNAIAPSLVRT 189
>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|B Chain B, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|C Chain C, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|D Chain D, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCF|A Chain A, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|B Chain B, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|C Chain C, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|D Chain D, Crystal Structure Of A Small-chain Dehydrogenase
Length = 223
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP----MTTCVPDKVKETFTRLIPFK 426
AA A +EA TK +A E+A IR N I PG +T M D + + +P
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+ G+ +I + +L + ++SY+TGT+I V GG
Sbjct: 189 KVGEASDI--AMAYLFAIQNSYMTGTVIDVDGG 219
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 276 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP----MTTSVPDKVKETFTRLIPLK 331
AA A +EA TK +A E+A IR N I PG +T M D + + +P+
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188
Query: 332 RFGKPEAVC 340
+ G+ +
Sbjct: 189 KVGEASDIA 197
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 109 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET 143
AA A +EA TK +A E+A IR N I PG +T
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISPGLTKT 163
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAG-ITRDNWFLKLTEKDFQQVFDVNLKGTF 238
+D++ I + + ++F + ++LVN AG + ++ +D Q VFD N+
Sbjct: 94 LDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 239 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 298
++QAV + + K G+ S Y A+K V AFT S+ E+ I
Sbjct: 153 NITQAVLP-IFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI 211
Query: 299 RCNVILPGFIETPMT 313
R +I PG +ET +
Sbjct: 212 RVILIAPGLVETEFS 226
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG-ITRDNWFLKLTEKDFQQVFDVNLKGTF 71
+D++ I + + ++F + ++LVN AG + ++ +D Q VFD N+
Sbjct: 94 LDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
++QAV + + K G+ S Y A+K V AFT S+ E+ I
Sbjct: 153 NITQAVLP-IFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI 211
Query: 132 RCNVILPGFIET 143
R +I PG +ET
Sbjct: 212 RVILIAPGLVET 223
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV----PDKVKETFTRLI 423
S Y A+K V AFT S+ E+ IR +I PG +ET + ++ K +
Sbjct: 186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTT 245
Query: 424 PFKRFGKPEEIGEVICFLASDR-SSYITGTLI 454
P +++ ++I + S + ++ I TLI
Sbjct: 246 PL----MADDVADLIVYATSRKQNTVIADTLI 273
>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|E Chain E, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|F Chain F, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|G Chain G, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|H Chain H, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2WYU|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYV|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYW|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
Length = 261
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRF 428
A KA +EA + +A E+ G+R N I G + T +P K+ + + P +R
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRN 220
Query: 429 GKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
EE+G + FL S +S ITG ++ V G
Sbjct: 221 ITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 276 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPD--KVKETFTRLIPLKR 332
A KA +EA + +A E+ G+R N I G + T S+P K+ + + PL+R
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR 219
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 109 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPD--KVKETFTRLIPLKR 165
A KA +EA + +A E+ G+R N I G + T S+P K+ + + PL+R
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR 219
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
+V+ + AGI ++ D++ V D++L G+ +A L+E
Sbjct: 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF 169
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS 148
G + N G Y K GV +++A E+ GI +V+ P +ET ++++
Sbjct: 170 AGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN 221
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
+V+ + AGI ++ D++ V D++L G+ +A L+E
Sbjct: 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF 169
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTS 315
G + N G Y K GV +++A E+ GI +V+ P +ET + ++
Sbjct: 170 AGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN 221
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 337 EAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCN 396
EA L+E G + N G Y K GV +++A E+ GI +
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVS 207
Query: 397 VILPGFIETPMTT 409
V+ P +ET + +
Sbjct: 208 VLCPMVVETKLVS 220
>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|D Chain D, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|B Chain B, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|C Chain C, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
Length = 257
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 374 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGKP 431
KA +EA K +A ++ GIR N I G I T V D + P +R
Sbjct: 164 KASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQ 223
Query: 432 EEIGEVICFLASDRSSYITGTLIKVTGG 459
EE+G+ FL SD + +TG I V G
Sbjct: 224 EEVGDTAVFLFSDLARGVTGENIHVDSG 251
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 24/177 (13%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L LP DV+N ++ TIK++ V A RD D + F +
Sbjct: 61 LVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD---------DLKGEFVDTSR 111
Query: 236 GTFLVSQ--------AVCKELVETKXXXXXXXXXXXVGQMGNMGQSNY---AATKAGVEA 284
FL++Q AV +E + +G G NY KA +EA
Sbjct: 112 DGFLLAQNISAFSLTAVAREAKKVMTEGGNILTLTYLG--GERVVKNYNVMGVAKASLEA 169
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTSVPD--KVKETFTRLIPLKRFGKPEAV 339
K +A ++ GIR N I G I T V D + PL+R E V
Sbjct: 170 SVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEV 226
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 61/170 (35%), Gaps = 24/170 (14%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L LP DV+N ++ IK++ V A RD D + F +
Sbjct: 61 LVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD---------DLKGEFVDTSR 111
Query: 69 GTFLVSQ--------AVCKELVETKXXXXXXXXXXXVGQMGNMGQSNY---AATKAGVEA 117
FL++Q AV +E + +G G NY KA +EA
Sbjct: 112 DGFLLAQNISAFSLTAVAREAKKVMTEGGNILTLTYLG--GERVVKNYNVMGVAKASLEA 169
Query: 118 FTKSVAMEMATFGIRCNVILPGFIETPMITSVPD--KVKETFTRLIPLKR 165
K +A ++ GIR N I G I T V D + PL+R
Sbjct: 170 SVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRR 219
>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|B Chain B, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|C Chain C, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|D Chain D, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|3OJE|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase (Apo Form)
Length = 256
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 374 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGKP 431
KA +EA K +A ++ GIR N I G I T V D + P +R
Sbjct: 164 KASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQ 223
Query: 432 EEIGEVICFLASDRSSYITGTLIKVTGG 459
EE+G+ FL SD + +TG I V G
Sbjct: 224 EEVGDTAVFLFSDLARGVTGENIHVDSG 251
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 64/177 (36%), Gaps = 24/177 (13%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L LP DV+N ++ TIK++ V A RD D + F +
Sbjct: 61 LVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD---------DLKGEFVDTSR 111
Query: 236 GTFLVSQ--------AVCKELVETKXXXXXXXXXXXVGQMGNMGQSNY---AATKAGVEA 284
FL++Q AV +E + +G G NY KA +EA
Sbjct: 112 DGFLLAQNISAFSLTAVAREAKKVMTEGGNILTLTYLG--GERVVKNYNVMGVAKASLEA 169
Query: 285 FTKSVAMEMATFGIRCNVILPGFIETPMTTSVPD--KVKETFTRLIPLKRFGKPEAV 339
K +A ++ GIR N I G I T V D + PL+R E V
Sbjct: 170 SVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQEEV 226
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 61/170 (35%), Gaps = 24/170 (14%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L LP DV+N ++ IK++ V A RD D + F +
Sbjct: 61 LVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRD---------DLKGEFVDTSR 111
Query: 69 GTFLVSQ--------AVCKELVETKXXXXXXXXXXXVGQMGNMGQSNY---AATKAGVEA 117
FL++Q AV +E + +G G NY KA +EA
Sbjct: 112 DGFLLAQNISAFSLTAVAREAKKVMTEGGNILTLTYLG--GERVVKNYNVMGVAKASLEA 169
Query: 118 FTKSVAMEMATFGIRCNVILPGFIETPMITSVPD--KVKETFTRLIPLKR 165
K +A ++ GIR N I G I T V D + PL+R
Sbjct: 170 SVKYLANDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEERAPLRR 219
>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXT|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXW|A Chain A, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IXW|B Chain B, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IY1|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
pdb|4IY1|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
Length = 254
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET----------PMTTCVPDKVKE 417
S YA+ +AG A +++ E+ I I P +++ P T P+ V
Sbjct: 143 STYASARAGASALANALSKELGEHNIPVFAIAPNGVDSGDSPYYYPSEPWKTS-PEHVA- 200
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+ +R G +E+GE++ FLAS Y+TG + + GG
Sbjct: 201 WVRKYTALQRLGTQKELGELVTFLASGSCDYLTGQVFWLAGGF 243
>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
Length = 261
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 371 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP------DKVKETFTRLIP 424
A KA +EA + +A E+ G+R N I G + T +P D+V +T P
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKXYDRVAQT----AP 216
Query: 425 FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
+R EE+G + FL S +S ITG ++ V G
Sbjct: 217 LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 276 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP------DKVKETFTRLIP 329
A KA +EA + +A E+ G+R N I G + T S+P D+V +T P
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKXYDRVAQT----AP 216
Query: 330 LKR 332
L+R
Sbjct: 217 LRR 219
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 109 AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVP------DKVKETFTRLIP 162
A KA +EA + +A E+ G+R N I G + T S+P D+V +T P
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKXYDRVAQT----AP 216
Query: 163 LKR 165
L+R
Sbjct: 217 LRR 219
>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3I1J|B Chain B, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
Length = 247
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 13/147 (8%)
Query: 193 STIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETK 252
+ ++ +F R +L N + I +L ++DF QV VN+ TF +++A+ L++
Sbjct: 86 ARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLP-LLKRS 144
Query: 253 XXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM-ATFGIRCNVILPGFI--- 308
VG+ G Y +K E +++A E+ +R N I PG
Sbjct: 145 EDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRTG 204
Query: 309 --------ETPMTTSVPDKVKETFTRL 327
E P+ P+ + + L
Sbjct: 205 XRAQAYPDENPLNNPAPEDIXPVYLYL 231
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 28 IKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXX 87
++ +F R +L N + I +L ++DF QV VN+ TF +++A+ L++
Sbjct: 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLP-LLKRSED 146
Query: 88 XXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM-ATFGIRCNVILPGFIET 143
VG+ G Y +K E +++A E+ +R N I PG T
Sbjct: 147 ASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRT 203
>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
pdb|3PJE|B Chain B, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
Length = 270
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252
>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|B Chain B, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|C Chain C, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|D Chain D, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|E Chain E, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|F Chain F, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|G Chain G, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|H Chain H, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
Length = 265
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 224
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 225 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 255
>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFG|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFH|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFH|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFI|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|C Chain C, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|D Chain D, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1QG6|A Chain A, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|B Chain B, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|C Chain C, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|D Chain D, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1D8A|A Chain A, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
pdb|1D8A|B Chain B, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
Length = 261
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 220
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 221 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251
>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
pdb|3PJD|B Chain B, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
Length = 270
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252
>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1C14|B Chain B, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1I2Z|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I2Z|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I30|A Chain A, E. Coli Enoyl Reductase +nad+sb385826
pdb|1I30|B Chain B, E. Coli Enoyl Reductase +nad+sb385826
pdb|1LX6|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LX6|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LXC|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1LXC|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1MFP|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|1MFP|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|2FHS|A Chain A, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
pdb|2FHS|B Chain B, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
Length = 262
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252
>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|B Chain B, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|C Chain C, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|D Chain D, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIG|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Inh)
Length = 266
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKE 417
G + NY KA ++A K +A ++ IR N I G I T + D + +
Sbjct: 151 GELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILK 210
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P +R PEE+G+ FL SD S ITG + V G
Sbjct: 211 DIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253
>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
pdb|3PJF|B Chain B, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
Length = 270
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + +A M G+R N I G I T + + D K+ + P +R
Sbjct: 162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVT 221
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
E++G FL SD S+ I+G ++ V GG +
Sbjct: 222 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252
>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWZ|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PWZ|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PX0|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1ZMT|A Chain A, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|B Chain B, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|C Chain C, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|D Chain D, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZO8|A Chain A, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|B Chain B, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|C Chain C, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|D Chain D, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|E Chain E, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|F Chain F, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|G Chain G, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|H Chain H, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|I Chain I, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|J Chain J, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|K Chain K, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|L Chain L, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|M Chain M, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|N Chain N, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|O Chain O, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|P Chain P, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
Length = 254
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET----------PMTTCVPDKVKE 417
S Y + +AG +++ E+ + I I P ++ + P T P+ V
Sbjct: 143 STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN-PEHVAH 201
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
++ +R G +E+GE++ FLAS Y+TG + + GG
Sbjct: 202 V-KKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 243
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +DV++ T TA++ EK P + +VN AG+ ++Q++FDVN+
Sbjct: 62 LCAQVDVTDKYTFDTAITR-AEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G QAV + + + G+ + Y TK V A +++V E+A
Sbjct: 121 GLLNGMQAVLAPM-KARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAA 179
Query: 129 FGIRCNVILPGFIETPMIT-SVPDKVKETF 157
+R I P ++T +++ + ++K+ +
Sbjct: 180 SNVRVMTIAPSAVKTELLSHTTSQQIKDGY 209
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L +DV++ T TA+ T EK P + +VN AG+ ++Q++FDVN+
Sbjct: 62 LCAQVDVTDKYTFDTAI-TRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G QAV + + + G+ + Y TK V A +++V E+A
Sbjct: 121 GLLNGMQAVLAPM-KARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAA 179
Query: 296 FGIRCNVILPGFIETP-MTTSVPDKVKETF 324
+R I P ++T ++ + ++K+ +
Sbjct: 180 SNVRVMTIAPSAVKTELLSHTTSQQIKDGY 209
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 367 QSNYAA---TKAGVEAFTKSVAMEMATFGIRCNVILPGFI------------ETPMTTCV 411
Q+ Y A K+ + A ++++A E+ GIR N +LPG+I T V
Sbjct: 154 QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSV 213
Query: 412 PDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
D + KR +E+ I F+ASD +S ITG + V G
Sbjct: 214 ED-IYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCG 260
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
LS+ D+++ + ++ + + + R V+ N + F T + + ++ +
Sbjct: 63 LSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVF 122
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
G + Q L E+K G Y K+ + A ++++A E+
Sbjct: 123 GALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGA--YKMAKSALLAMSQTLATELGE 180
Query: 296 FGIRCNVILPGFI 308
GIR N +LPG+I
Sbjct: 181 KGIRVNSVLPGYI 193
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
LS+ D+++ + ++ + + + R V+ N + F T + + ++ +
Sbjct: 63 LSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVF 122
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
G + Q L E+K G Y K+ + A ++++A E+
Sbjct: 123 GALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGA--YKMAKSALLAMSQTLATELGE 180
Query: 129 FGIRCNVILPGFI 141
GIR N +LPG+I
Sbjct: 181 KGIRVNSVLPGYI 193
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 178 LPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE--KDFQQVFDVNLK 235
LP+D+++ + T + I +K+ ++LVN A D L+E +F+++ ++N+
Sbjct: 64 LPLDITDCTKADTEIKDIHQKYG-AVDILVNAAAXFXDG---SLSEPVDNFRKIXEINVI 119
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
+ + + V E+ + + + G Y +TK + +S+ E+A
Sbjct: 120 AQYGILKTVT-EIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178
Query: 296 FGIRCNVILPGFIET 310
GIR + PG++ T
Sbjct: 179 LGIRVTTLCPGWVNT 193
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE--KDFQQVFDVNLK 68
LP+D+++ + T + I +K+ ++LVN A D L+E +F+++ ++N+
Sbjct: 64 LPLDITDCTKADTEIKDIHQKYG-AVDILVNAAAXFXDG---SLSEPVDNFRKIXEINVI 119
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
+ + + V E+ + + + G Y +TK + +S+ E+A
Sbjct: 120 AQYGILKTVT-EIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178
Query: 129 FGIRCNVILPGFIET 143
GIR + PG++ T
Sbjct: 179 LGIRVTTLCPGWVNT 193
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIET 405
Y +TK + +S+ E+A GIR + PG++ T
Sbjct: 158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNT 193
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------------TTCVPDK 414
S Y+ +K V++F + + + I N + PG T M T+ ++
Sbjct: 164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQ 223
Query: 415 VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
++ P R G P+++ V+ FL S ++ G ++ + GG A
Sbjct: 224 RQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 14/149 (9%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++ V+ +G+ +TE++F +VF +N +G F V++ + L E
Sbjct: 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK 157
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM----------- 312
S Y+ +K V++F + + + I N + PG T M
Sbjct: 158 --DFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN 215
Query: 313 -TTSVPDKVKETFTRLIPLKRFGKPEAVC 340
T+ ++ ++ PL R G P+ V
Sbjct: 216 GTSYTAEQRQQMAAHASPLHRNGWPQDVA 244
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++ V+ +G+ +TE++F +VF +N +G F V++ + L E
Sbjct: 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK 157
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------- 149
S Y+ +K V++F + + + I N + PG T M V
Sbjct: 158 --DFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN 215
Query: 150 -----PDKVKETFTRLIPLKRFGKPE 170
++ ++ PL R G P+
Sbjct: 216 GTSYTAEQRQQMAAHASPLHRNGWPQ 241
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
D+SN I + S I+ + S ++ +N AG+ R + L + ++ +F+VN+ +
Sbjct: 91 DLSNEEDILSMFSAIRSQHS-GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAMEM--AT 295
++ + + E + + S Y+ATK V A T+ + E+ A
Sbjct: 150 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 209
Query: 296 FGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPLKRFGKPEAVCKELV 344
IR I PG +ET + DK E + KPE V + ++
Sbjct: 210 THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI 258
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
D+SN I + SAI+ + S ++ +N AG+ R + L + ++ +F+VN+ +
Sbjct: 91 DLSNEEDILSMFSAIRSQHS-GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN---YAATKAGVEAFTKSVAMEM--AT 128
++ + + E + + S Y+ATK V A T+ + E+ A
Sbjct: 150 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 209
Query: 129 FGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPE 170
IR I PG +ET + DK E + KPE
Sbjct: 210 THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE 251
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 370 YAATKAGVEAFTKSVAMEM--ATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKR 427
Y+ATK V A T+ + E+ A IR I PG +ET + DK E +
Sbjct: 187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMK 246
Query: 428 FGKPEEIGEVICFLAS 443
KPE++ E + ++ S
Sbjct: 247 CLKPEDVAEAVIYVLS 262
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQVFDVNL 67
L +P DV++ ++ +A EKF R +VL N AG + LT ++QV D NL
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRV-DVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNL 135
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN-YAATKAGVEAFTKSVAMEM 126
G FL +Q + + + S Y ATK + TKS +++
Sbjct: 136 TGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDG 195
Query: 127 ATFGIRCNVILPGFIETP 144
I C I G +TP
Sbjct: 196 RVHDIACGQIDIGNADTP 213
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 3/138 (2%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLK-LTEKDFQQVFDVNL 234
L +P DV++ ++ + EKF R +VL N AG + LT ++QV D NL
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRV-DVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNL 135
Query: 235 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN-YAATKAGVEAFTKSVAMEM 293
G FL +Q + + + S Y ATK + TKS +++
Sbjct: 136 TGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDG 195
Query: 294 ATFGIRCNVILPGFIETP 311
I C I G +TP
Sbjct: 196 RVHDIACGQIDIGNADTP 213
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTE-KDFQQVFDVNL 234
L L +DV + + S A+ + E+F+ L+N AG+ + + D+ D N+
Sbjct: 72 LPLTLDVRDRAAXSAAVDNLPEEFATLRG-LINNAGLALGTDPAQSCDLDDWDTXVDTNI 130
Query: 235 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 294
KG ++ + L+ G+ G Y TKA VE F+ ++ ++
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ 190
Query: 295 TFGIRCNVILPGFIET 310
G+R + PG E+
Sbjct: 191 GTGVRVTNLEPGLCES 206
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE-KDFQQVFDVNL 67
L L +DV + + S A+ + E+F+ L+N AG+ + + D+ D N+
Sbjct: 72 LPLTLDVRDRAAXSAAVDNLPEEFATLRG-LINNAGLALGTDPAQSCDLDDWDTXVDTNI 130
Query: 68 KGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMA 127
KG ++ + L+ G+ G Y TKA VE F+ ++ ++
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ 190
Query: 128 TFGIRCNVILPGFIET 143
G+R + PG E+
Sbjct: 191 GTGVRVTNLEPGLCES 206
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGF-----IETPMTTCVPDK---VKETF 419
++Y+ATK + ++S+A + N I PG +ET + + P++ ++E
Sbjct: 155 AHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAE 214
Query: 420 TRLIP-------FKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
R +R +PEEI ++ FL+S SS I G+ +++ GGL
Sbjct: 215 KRFXKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGL 262
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++L+N GI + + ++D+ ++F+VN+ ++++ K+ +E K
Sbjct: 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERK-EGRVIFIASE 145
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGF-----IETPMTTSVPD 318
+ ++Y+ATK + ++S+A + N I PG +ET + + P+
Sbjct: 146 AAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPN 205
Query: 319 KVKETFTRLIPLKRFGK---PEAVCKELV 344
E T KRF K P ++ + L+
Sbjct: 206 ---EQLTIEEAEKRFXKENRPTSIIQRLI 231
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++L+N GI + + ++D+ ++F+VN+ ++++ K+ +E K
Sbjct: 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERK-EGRVIFIASE 145
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPG 139
+ ++Y+ATK + ++S+A + N I PG
Sbjct: 146 AAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPG 188
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKETFTRLIPFKRFGK 430
KA +E+ + +A ++A G R N I G ++T + + E T++ PF GK
Sbjct: 177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---GK 233
Query: 431 P---EEIGEVICFLASDRSSYITGTLIKVTGG 459
P E++G+ FL SD + ITG ++ V G
Sbjct: 234 PITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTR----LIPF 425
YA+ K G+ A T ++AM + + N I PG+I ++ FT+ IP
Sbjct: 146 YASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTE--------QQEFTQEDCAAIPA 196
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
+ G P++I ++ FL + +ITG I V GG++
Sbjct: 197 GKVGTPKDISNMVLFLC--QQDFITGETIIVDGGMS 230
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++ T+ + EK R +VLVN A L ++F + V LK + +
Sbjct: 55 DVADPLTLKKFVEYAMEKLQRI-DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYEL 113
Query: 241 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN----------YAATKAGVEAFTKSVA 290
S+ EL++ K G++ N+ + YA+ K G+ A T ++A
Sbjct: 114 SRLCRDELIKNK------------GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALA 161
Query: 291 MEMATFGIRCNVILPGFI 308
M + + N I PG+I
Sbjct: 162 MSLGP-DVLVNCIAPGWI 178
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 51/227 (22%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++ T+ + EK R +VLVN A L ++F + V LK + +
Sbjct: 55 DVADPLTLKKFVEYAMEKLQRI-DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYEL 113
Query: 74 SQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSN----------YAATKAGVEAFTKSVA 123
S+ EL++ K G++ N+ + YA+ K G+ A T ++A
Sbjct: 114 SRLCRDELIKNK------------GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALA 161
Query: 124 MEMATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVS 183
M + + N I PG+I +T + +E IP + G P+ D+S
Sbjct: 162 MSLGP-DVLVNCIAPGWIN---VTEQQEFTQED-CAAIPAGKVGTPK----------DIS 206
Query: 184 NTSTISTAMSTIKEKFSRPPNVLVNCAGITRD-------NWFLKLTE 223
N + ++ F ++V+ G+++ NWF K+ +
Sbjct: 207 N-----MVLFLCQQDFITGETIIVD-GGMSKRMIYHGDWNWFYKIDK 247
>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With 17- Beta-Estradiol
pdb|1FDT|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With Estradiol And Nadp+
pdb|3KLM|X Chain X, 17beta-Hsd1 In Complex With Dht
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTR 326
G+ ++I G + T V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVK 416
G MG Y A+K +E +S+A+ + FG+ ++I G + T V P++V
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL 204
Query: 417 E-----TFTRLIPFKRFGK---------PEEIGEVICFLASDRS 446
+ TF R + K PEE+ EV FL + R+
Sbjct: 205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV--FLTALRA 246
>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDV|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 146 ITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLP--------MDVSNTSTISTAMSTIKE 197
+ S P + + + L LK G+ ++ L+ P +DV ++ +++ A + E
Sbjct: 22 LASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81
Query: 198 KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXX 257
+VLV AG+ L E V DVN+ GT + QA ++ + +
Sbjct: 82 GRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM-KRRGSGRV 137
Query: 258 XXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP 317
G MG Y A+K +E +S+A+ + FG+ ++I G + T V
Sbjct: 138 LVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL 197
Query: 318 DKVKETFTR--LIPLKRFGKPEAVCKEL 343
+E R + RF + A+ K++
Sbjct: 198 GSPEEVLDRTDIHTFHRFYQYLALSKQV 225
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVK 416
G MG Y A+K +E +S+A+ + FG+ ++I G + T V P++V
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL 204
Query: 417 E-----TFTRLIPFKRFGK---------PEEIGEVICFLASDRS 446
+ TF R + K PEE+ EV FL + R+
Sbjct: 205 DRTDIHTFHRFYQYLALSKQVFREAAQNPEEVAEV--FLTALRA 246
>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221q Complexed With Estradiol
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 146 ITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLP--------MDVSNTSTISTAMSTIKE 197
+ S P + + + L LK G+ ++ L+ P +DV ++ +++ A + E
Sbjct: 22 LASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81
Query: 198 KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXX 257
+VLV AG+ L E V DVN+ GT + QA ++ + +
Sbjct: 82 GRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM-KRRGSGRV 137
Query: 258 XXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP 317
G MG Y A+K +E +S+A+ + FG+ ++I G + T V
Sbjct: 138 LVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL 197
Query: 318 DKVKETFTR 326
+E R
Sbjct: 198 GSPEEVLDR 206
>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1EQU|B Chain B, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1DHT|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dihydrotestosterone
pdb|3DHE|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dehydroepiandrosterone
pdb|1I5R|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Em1745 Complex
pdb|1JTV|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
Type 1 Complexed With Testosterone
pdb|1QYV|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Complex With Nadp
pdb|1QYW|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Comlex With
Androstanedione And Nadp
pdb|1QYX|A Chain A, Crystal Structure Of Human Estrogenic
17beta-Hydroxysteroid Dehydrogenase Complex With
Androstenedione And Nadp
pdb|1BHS|A Chain A, Human Estrogenic 17beta-hydroxysteroid Dehydrogenase
pdb|3DEY|X Chain X, Crystal Structure Of 17beta-Hsd1 With Dht In Normal And
Reverse Orientation.
pdb|3HB4|X Chain X, 17beta-Hydroxysteroid Dehydrogenase Type1 Complexed With
E2b
pdb|3HB5|X Chain X, Binary And Ternary Crystal Structures Of A Novel Inhibitor
Of 17 Beta-Hsd Type 1: A Lead Compound For Breast Cancer
Therapy
pdb|3KLP|X Chain X, 17beta-Hsd1 In Complex With A-Diol
pdb|3KM0|A Chain A, 17betahsd1 In Complex With 3beta-Diol
pdb|3KM0|B Chain B, 17betahsd1 In Complex With 3beta-Diol
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTR 326
G+ ++I G + T V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVK 416
G MG Y A+K +E +S+A+ + FG+ ++I G + T V P++V
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL 204
Query: 417 E-----TFTRLIPFKRFGK---------PEEIGEVICFLASDRS 446
+ TF R + K PEE+ EV FL + R+
Sbjct: 205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV--FLTALRA 246
>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
C-Terminal Deletion Mutant Complexed With Estradiol And
Nadp+
Length = 289
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 146 ITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLP--------MDVSNTSTISTAMSTIKE 197
+ S P + + + L LK G+ ++ L+ P +DV ++ +++ A + E
Sbjct: 22 LASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81
Query: 198 KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXX 257
+VLV AG+ L E V DVN+ GT + QA ++ + +
Sbjct: 82 GRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM-KRRGSGRV 137
Query: 258 XXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVP 317
G MG Y A+K +E +S+A+ + FG+ ++I G + T V
Sbjct: 138 LVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL 197
Query: 318 DKVKETFTR 326
+E R
Sbjct: 198 GSPEEVLDR 206
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVK 416
G MG Y A+K +E +S+A+ + FG+ ++I G + T V P++V
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL 204
Query: 417 E-----TFTRLIPFKRFGK---------PEEIGEVICFLASDRS 446
+ TF R + K PEE+ EV FL + R+
Sbjct: 205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV--FLTALRA 246
>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From
Salmonella Enterica Subsp. Enterica Serovar Typhi Str.
Ct18
Length = 258
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 221 LTEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 277
++E+D +Q V VN+ TF+++QA+ L+++ VG+ G YA
Sbjct: 111 MSEQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSS-VGRQGRANWGAYAT 169
Query: 278 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-----PDKVKETFTRLIPL 330
+K E + +A E +R N I PG T M S P K+K T ++PL
Sbjct: 170 SKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLK-TPADIMPL 226
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 54 LTEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAA 110
++E+D +Q V VN+ TF+++QA+ L+++ VG+ G YA
Sbjct: 111 MSEQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSS-VGRQGRANWGAYAT 169
Query: 111 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV-----PDKVKETFTRLIPL 163
+K E + +A E +R N I PG T M S P K+K T ++PL
Sbjct: 170 SKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQKLK-TPADIMPL 226
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 18/98 (18%)
Query: 359 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV-----PD 413
VG+ G YA +K E + +A E +R N I PG T M P
Sbjct: 156 VGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSMRASAFPTEDPQ 215
Query: 414 KVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITG 451
K+K P +I + +L D S TG
Sbjct: 216 KLK-------------TPADIMPLYLWLMGDDSRRKTG 240
>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKE 417
G NY KA +EA K +A+++ IR N I G I T V + + +
Sbjct: 171 GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK 230
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P KR E+G+ +L SD SS +TG I V G
Sbjct: 231 EIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 272
>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (Two
Molecules In Au)
pdb|3GNT|B Chain B, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (Two
Molecules In Au)
Length = 256
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKE 417
G NY KA +EA K +A+++ IR N I G I T V + + +
Sbjct: 150 GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK 209
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P KR E+G+ +L SD SS +TG I V G
Sbjct: 210 EIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252
>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp
Reductase In Complex With Nadp And Afn-1252
Length = 256
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKE 417
G NY KA +EA K +A+++ IR N I G I T V + + +
Sbjct: 150 GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK 209
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P KR E+G+ +L SD SS +TG I V G
Sbjct: 210 EIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252
>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALJ|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALK|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALM|A Chain A, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|B Chain B, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|C Chain C, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|D Chain D, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALN|A Chain A, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|B Chain B, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|C Chain C, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|D Chain D, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|E Chain E, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|F Chain F, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|G Chain G, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|H Chain H, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|I Chain I, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|J Chain J, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|K Chain K, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|L Chain L, Crystal Structure Of S. Aureus Fabi (P32)
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKE 417
G NY KA +EA K +A+++ IR N I G I T V + + +
Sbjct: 176 GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK 235
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P KR E+G+ +L SD SS +TG I V G
Sbjct: 236 EIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278
>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (One
Molecule In Au)
pdb|3GR6|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|D Chain D, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|G Chain G, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|J Chain J, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
Length = 260
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 363 GNMGQSNY---AATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVP--DKVKE 417
G NY KA +EA K +A+++ IR N I G I T V + + +
Sbjct: 154 GEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK 213
Query: 418 TFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGG 459
P KR E+G+ +L SD SS +TG I V G
Sbjct: 214 EIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 255
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 367 QSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------------TTCVPDK 414
S ++ +K V++F + + + I N + PG T M T+ ++
Sbjct: 164 HSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQ 223
Query: 415 VKETFTRLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLA 461
++ P R G P+++ V+ FL S ++ G ++ + GG A
Sbjct: 224 RQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA 270
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 14/149 (9%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 263
++ V+ +G+ +TE++F +VF +N +G F V++ + L E
Sbjct: 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK 157
Query: 264 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM----------- 312
S ++ +K V++F + + + I N + PG T M
Sbjct: 158 --DFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN 215
Query: 313 -TTSVPDKVKETFTRLIPLKRFGKPEAVC 340
T+ ++ ++ PL R G P+ V
Sbjct: 216 GTSYTAEQRQQMAAHASPLHRNGWPQDVA 244
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXX 96
++ V+ +G+ +TE++F +VF +N +G F V++ + L E
Sbjct: 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK 157
Query: 97 VGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV------- 149
S ++ +K V++F + + + I N + PG T M V
Sbjct: 158 --DFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN 215
Query: 150 -----PDKVKETFTRLIPLKRFGKPE 170
++ ++ PL R G P+
Sbjct: 216 GTSYTAEQRQQMAAHASPLHRNGWPQ 241
>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|B Chain B, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|C Chain C, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|D Chain D, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|E Chain E, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|F Chain F, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKP- 431
KA +EA K +A+++ IR N I G I+T + + D F ++ + + P
Sbjct: 169 AKAALEASVKYLAVDLGPKHIRVNAISAGPIKTLAASGIGD-----FRYILKWNEYNAPL 223
Query: 432 ------EEIGEVICFLASDRSSYITGTLIKVTGG 459
EE+G+ +L SD S +TG + V G
Sbjct: 224 RRTVTIEEVGDSALYLLSDLSRSVTGEVHHVDSG 257
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 25/111 (22%)
Query: 369 NYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRF 428
+Y A K GV ++ A+E+ IR N +LP + T M +TF P
Sbjct: 177 HYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMN-----DQTFRLFRPDLEN 231
Query: 429 GKPEE--------------------IGEVICFLASDRSSYITGTLIKVTGG 459
P++ I + FLASD S Y+TG + V G
Sbjct: 232 PGPDDFAPISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 152 KVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAG 211
KV T R L+ G + +++ +DV N + I ++++ ++ ++LVN AG
Sbjct: 26 KVIATGRRQERLQELKDELGDNLYIA-QLDVRNRAAIEEMLASLPAEWCNI-DILVNNAG 83
Query: 212 ITRD-NWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNM 270
+ K + +D++ + D N KG +++AV +VE + G
Sbjct: 84 LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE-RNHGHIINIGSTAGSWPYA 142
Query: 271 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFI 308
G + Y ATKA V F+ ++ ++ +R I PG +
Sbjct: 143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKGTF 71
+DV N + I ++++ ++ ++LVN AG+ K + +D++ + D N KG
Sbjct: 53 LDVRNRAAIEEMLASLPAEWCNI-DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLV 111
Query: 72 LVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGI 131
+++AV +VE + G G + Y ATKA V F+ ++ ++ +
Sbjct: 112 YMTRAVLPGMVE-RNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAV 170
Query: 132 RCNVILPGFI 141
R I PG +
Sbjct: 171 RVTDIEPGLV 180
>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3NRC|B Chain B, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3UIC|A Chain A, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|B Chain B, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|C Chain C, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|D Chain D, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|E Chain E, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|F Chain F, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|G Chain G, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|H Chain H, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|I Chain I, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|J Chain J, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|K Chain K, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|L Chain L, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|M Chain M, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|N Chain N, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|O Chain O, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|P Chain P, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
Length = 280
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + A+ + GI+ N + G I+T + + + K+ + + P K+
Sbjct: 182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVD 241
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGG 459
E+G + FL SD ++ ITG ++ V G
Sbjct: 242 IMEVGNTVAFLCSDMATGITGEVVHVDAG 270
>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|B Chain B, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|C Chain C, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|D Chain D, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
Length = 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPD--KVKETFTRLIPFKRFGK 430
KA +EA + A+ + GI+ N + G I+T + + + K+ + + P K+
Sbjct: 162 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVD 221
Query: 431 PEEIGEVICFLASDRSSYITGTLIKVTGG 459
E+G + FL SD ++ ITG ++ V G
Sbjct: 222 IMEVGNTVAFLCSDMATGITGEVVHVDAG 250
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 368 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPF-K 426
S YA KA VE +T++ + E+ I N I PG ++T K F +
Sbjct: 159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGN 218
Query: 427 RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ K E+I +I FL +D +I G I GG T
Sbjct: 219 QLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 273 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTS 315
S YA KA VE +T++ + E+ I N I PG PM TS
Sbjct: 159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPG----PMDTS 197
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 106 SNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS 148
S YA KA VE +T++ + E+ I N I PG PM TS
Sbjct: 159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPG----PMDTS 197
>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3F5Q|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3GZ4|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
pdb|3GZ4|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
Length = 262
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 195 IKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVET 251
I + R VL N AG+ D ++E+D +Q V VN+ TF+++QA+ L+++
Sbjct: 88 IAVNYPRLDGVLHN-AGLLGD--VCPMSEQDPQVWQDVMQVNVNATFMLTQALLPLLLKS 144
Query: 252 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 311
VG+ G YAA+K E + +A E +R N I PG T
Sbjct: 145 D-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTA 202
Query: 312 MTTSV-----PDKVKETFTRLIPL 330
M S P K+K T ++PL
Sbjct: 203 MRASAFPTEDPQKLK-TPADIMPL 225
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 28 IKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVET 84
I + R VL N AG+ D ++E+D +Q V VN+ TF+++QA+ L+++
Sbjct: 88 IAVNYPRLDGVLHN-AGLLGD--VCPMSEQDPQVWQDVMQVNVNATFMLTQALLPLLLKS 144
Query: 85 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 144
VG+ G YAA+K E + +A E +R N I PG T
Sbjct: 145 D-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTA 202
Query: 145 MITSV-----PDKVKETFTRLIPL 163
M S P K+K T ++PL
Sbjct: 203 MRASAFPTEDPQKLK-TPADIMPL 225
>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed
17-beta- Estradiol
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 69
+L +DV ++ +++ A + E +VLV AG+ L E V +VN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLEVNVVG 117
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 130 GIRCNVILPGFIETPMITSVPDKVKETFTR 159
G+ ++I G + T + V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 177 SLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKG 236
+L +DV ++ +++ A + E +VLV AG+ L E V +VN+ G
Sbjct: 61 TLQLDVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLEVNVVG 117
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
T + QA ++ + + G MG Y A+K +E +S+A+ + F
Sbjct: 118 TVRMLQAFLPDM-KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 297 GIRCNVILPGFIETPMTTSVPDKVKETFTR 326
G+ ++I G + T V +E R
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 360 GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCV---PDKVK 416
G MG Y A+K +E +S+A+ + FG+ ++I G + T V P++V
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVL 204
Query: 417 E-----TFTRLIPFKRFGK---------PEEIGEVICFLASDRS 446
+ TF R + K PEE+ EV FL + R+
Sbjct: 205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV--FLTALRA 246
>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|B Chain B, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|C Chain C, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|D Chain D, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
Length = 271
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLI-------PF 425
KA +EA + +A+ + G+R N I G P+ T +K +F +++ P
Sbjct: 170 AKAALEASVRYLAVSLGAKGVRVNAISAG----PIKTLAASGIK-SFGKILDFVESNSPL 224
Query: 426 KRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
KR E++G FL SD +S +T ++ V G
Sbjct: 225 KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWF----LKLTEKDFQQVFDVNLKG 69
D+S++ I+ + + R +VLVN AG+ WF + ++ + VNLK
Sbjct: 86 DLSHSDAIAAFATGVLAAHGRC-DVLVNNAGV---GWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 70 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
+L+ +A ++ K G+ + Y A+K G+ S A E+
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSL-AGKNPVADGAAYTASKWGLNGLMTSAAEELRQH 200
Query: 130 GIRCNVILPGFIET 143
+R +++ PG + T
Sbjct: 201 QVRVSLVAPGSVRT 214
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWF----LKLTEKDFQQVFDVNLKG 236
D+S++ I+ + + R +VLVN AG+ WF + ++ + VNLK
Sbjct: 86 DLSHSDAIAAFATGVLAAHGRC-DVLVNNAGV---GWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 237 TFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
+L+ +A ++ K G+ + Y A+K G+ S A E+
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSL-AGKNPVADGAAYTASKWGLNGLMTSAAEELRQH 200
Query: 297 GIRCNVILPGFIET 310
+R +++ PG + T
Sbjct: 201 QVRVSLVAPGSVRT 214
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFG 429
Y A+K G+ S A E+ +R +++ PG + T + K K +
Sbjct: 179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK-KSALGAI------- 230
Query: 430 KPEEIGEVICFLASDRS-SYITGTLIKVT 457
+P++I +V+ LA+ S+I+ L++ T
Sbjct: 231 EPDDIADVVALLATQADQSFISEVLVRPT 259
>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|E Chain E, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|F Chain F, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|G Chain G, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|H Chain H, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
Length = 293
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPFKRFGKP- 431
KA +EA K +A+++ IR N I G I+T + + D F ++ + + P
Sbjct: 186 AKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-----FRYILKWNEYNAPL 240
Query: 432 ------EEIGEVICFLASDRSSYITGTLIKVTGG 459
+E+G+V + SD S +TG + G
Sbjct: 241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274
>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
pdb|3F1L|B Chain B, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
Length = 252
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 195 IKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVET 251
I + R VL N AG+ D ++E++ +Q V VN+ TF+++QA+ L+++
Sbjct: 86 IAVNYPRLDGVLHN-AGLLGD--VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS 142
Query: 252 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 311
VG+ G YAA+K E + +A E +R N I PG T
Sbjct: 143 D-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTA 200
Query: 312 MTTSV-----PDKVKETFTRLIPL 330
M S P K+K T ++PL
Sbjct: 201 MRASAFPTEDPQKLK-TPADIMPL 223
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 28 IKEKFSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVET 84
I + R VL N AG+ D ++E++ +Q V VN+ TF+++QA+ L+++
Sbjct: 86 IAVNYPRLDGVLHN-AGLLGD--VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS 142
Query: 85 KXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETP 144
VG+ G YAA+K E + +A E +R N I PG T
Sbjct: 143 D-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTA 200
Query: 145 MITSV-----PDKVKETFTRLIPL 163
M S P K+K T ++PL
Sbjct: 201 MRASAFPTEDPQKLK-TPADIMPL 223
>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3F5S|B Chain B, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3GY0|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301 Complexed With Nadp
Length = 255
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 199 FSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXX 255
+ R VL N AG+ D ++E++ +Q V +N+ TF+++QA+ L+++
Sbjct: 88 YPRLDGVLHN-AGLLGD--VCPMSEQNPQVWQDVMQINVNATFMLTQALLPLLLKSDAGS 144
Query: 256 XXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTS 315
VG+ G YAA+K E + +A E +R N I PG T M S
Sbjct: 145 LVFTSSS-VGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRAS 202
Query: 316 V-----PDKVKETFTRLIPL 330
P K+K T ++PL
Sbjct: 203 AFPTEDPQKLK-TPADIMPL 221
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 32 FSRPPNVLVNCAGITRDNWFLKLTEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXX 88
+ R VL N AG+ D ++E++ +Q V +N+ TF+++QA+ L+++
Sbjct: 88 YPRLDGVLHN-AGLLGD--VCPMSEQNPQVWQDVMQINVNATFMLTQALLPLLLKSDAGS 144
Query: 89 XXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITS 148
VG+ G YAA+K E + +A E +R N I PG T M S
Sbjct: 145 LVFTSSS-VGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRAS 202
Query: 149 V-----PDKVKETFTRLIPL 163
P K+K T ++PL
Sbjct: 203 AFPTEDPQKLK-TPADIMPL 221
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
T L+ +DV++ +++ A + + R +VLVN AG+ + + +++++ DVN
Sbjct: 54 TALAQVLDVTDRHSVAAFAQAAVDTWGRI-DVLVNNAGVMPLSPLAAVKVDEWERMIDVN 112
Query: 67 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQ----------SNYAATKAGVE 116
+KG AV ++E + GQ+ N+G + Y ATK V
Sbjct: 113 IKGVLWGIGAVLP-IMEAQRS----------GQIINIGSIGALSVVPTAAVYCATKFAVR 161
Query: 117 AFTKSVAMEMATFGIRCNVILPGFIETPM 145
A + + E + IR + PG +E+ +
Sbjct: 162 AISDGLRQE--STNIRVTCVNPGVVESEL 188
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 170 EGSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 229
+ T L+ +DV++ +++ + + R +VLVN AG+ + + +++++
Sbjct: 50 DAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI-DVLVNNAGVMPLSPLAAVKVDEWERM 108
Query: 230 FDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQ----------SNYAATK 279
DVN+KG AV ++E + GQ+ N+G + Y ATK
Sbjct: 109 IDVNIKGVLWGIGAVLP-IMEAQRS----------GQIINIGSIGALSVVPTAAVYCATK 157
Query: 280 AGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV 316
V A + + E + IR + PG +E+ + ++
Sbjct: 158 FAVRAISDGLRQE--STNIRVTCVNPGVVESELAGTI 192
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 17/120 (14%)
Query: 59 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
F +F VN+KG +A LV ++ G N G Y ATK V
Sbjct: 108 FDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISN--AGFYPNGGGPLYTATKHAVVGL 165
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPM------------ITSVPDKVKETFTRLIPLKRF 166
+ +A E+A +R N + PG + T + I+SVP + + ++P+ R
Sbjct: 166 VRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVP--LADMLKSVLPIGRM 222
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 226 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 285
F +F VN+KG +A LV ++ G N G Y ATK V
Sbjct: 108 FDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISN--AGFYPNGGGPLYTATKHAVVGL 165
Query: 286 TKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKETFTRLIPL 330
+ +A E+A +R N + PG + T + + E +PL
Sbjct: 166 VRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPL 209
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 16/111 (14%)
Query: 364 NMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM------------TTCV 411
N G Y ATK V + +A E+A +R N + PG + T + + V
Sbjct: 149 NGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSV 207
Query: 412 PDKVKETFTRLIPFKRFGKPEEIGEVICFLASDRSSY-ITGTLIKVTGGLA 461
P + + ++P R EE F A+ S TG L+ GG+
Sbjct: 208 P--LADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256
>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
pdb|3L6E|B Chain B, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
Length = 235
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + D+++ + A +A E + P ++++CAG T + ++V + NL
Sbjct: 52 IGIVADLAHHEDVDVAFAAAVE-WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVXESNLV 110
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 128
T LV+Q + + E Q+G +S Y A+K G F +S+ E+
Sbjct: 111 STILVAQQTVRLIGERGGVLANVLSSAA--QVGKANESLYCASKWGXRGFLESLRAELKD 168
Query: 129 FGIRCNVILPGFIET 143
+R + P I +
Sbjct: 169 SPLRLVNLYPSGIRS 183
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
+ + D+++ + A + E + P ++++CAG T + ++V + NL
Sbjct: 52 IGIVADLAHHEDVDVAFAAAVE-WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVXESNLV 110
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMAT 295
T LV+Q + + E Q+G +S Y A+K G F +S+ E+
Sbjct: 111 STILVAQQTVRLIGERGGVLANVLSSAA--QVGKANESLYCASKWGXRGFLESLRAELKD 168
Query: 296 FGIRCNVILPGFIET 310
+R + P I +
Sbjct: 169 SPLRLVNLYPSGIRS 183
>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
Length = 245
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX--XXXXX 94
+ LV+ A + RD + ++ D+N+ +V + ++L+
Sbjct: 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNV----IVPAELSRQLLPALRAASGCVIYIN 132
Query: 95 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSVPDKVK 154
G + G + YAA+K + + E A GIR + + PG TPM+ + D
Sbjct: 133 SGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG 192
Query: 155 ETF 157
F
Sbjct: 193 TNF 195
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 366 GQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTCVPDKVKETFTRLIPF 425
G + YAA+K + + E A GIR + + PG TPM + D F I
Sbjct: 142 GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEI-- 199
Query: 426 KRFGKPEEIGEVICFL 441
+ +P+EI I F+
Sbjct: 200 --YIEPKEIANAIRFV 213
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 204 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVSQAVCKELVETKXXXX--XXXXX 261
+ LV+ A + RD + ++ D+N+ +V + ++L+
Sbjct: 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNV----IVPAELSRQLLPALRAASGCVIYIN 132
Query: 262 XXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVK 321
G + G + YAA+K + + E A GIR + + PG TPM + D
Sbjct: 133 SGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG 192
Query: 322 ETF 324
F
Sbjct: 193 TNF 195
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 240
DV++ T++ +++I ++ P +V+ AG+ D LT + QV + G
Sbjct: 592 DVADRETLAKVLASIPDEH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDG---- 645
Query: 241 SQAVCKELVETKXXXXXXXXXXXV-GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 299
+ L+E V G +G+ GQ NYAA +F ++A + + G+
Sbjct: 646 ----ARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAAN----SFLDALAQQRQSRGLP 697
Query: 300 CNVILPG-FIETPMTTSVPDKVKETFTR--LIPL 330
+ G + E M +++ + ++ R L+P+
Sbjct: 698 TRSLAWGPWAEHGMASTLREAEQDRLARSGLLPI 731
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLV 73
DV++ T++ +++I ++ P +V+ AG+ D LT + QV + G
Sbjct: 592 DVADRETLAKVLASIPDEH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDG---- 645
Query: 74 SQAVCKELVETKXXXXXXXXXXXV-GQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIR 132
+ L+E V G +G+ GQ NYAA +F ++A + + G+
Sbjct: 646 ----ARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAAN----SFLDALAQQRQSRGLP 697
Query: 133 CNVILPG-FIETPMITSVPDKVKETFTR--LIPL 163
+ G + E M +++ + ++ R L+P+
Sbjct: 698 TRSLAWGPWAEHGMASTLREAEQDRLARSGLLPI 731
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ---VFDVNLKGT 70
DV + ++ +A++ +F+R ++LVN AG + + L E F+Q + NL G
Sbjct: 91 DVGDPDQVAALFAAVRAEFARL-DLLVNNAG--SNVPPVPLEEVTFEQWNGIVAANLTGA 147
Query: 71 FLVSQAVCKEL-VETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 129
FL +Q + +T Q + Y ATK + TKS A++
Sbjct: 148 FLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXH 207
Query: 130 GIRCNVI 136
I C I
Sbjct: 208 DIACGQI 214
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ---VFDVNLKGT 237
DV + ++ + ++ +F+R ++LVN AG + + L E F+Q + NL G
Sbjct: 91 DVGDPDQVAALFAAVRAEFARL-DLLVNNAG--SNVPPVPLEEVTFEQWNGIVAANLTGA 147
Query: 238 FLVSQAVCKEL-VETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATF 296
FL +Q + +T Q + Y ATK + TKS A++
Sbjct: 148 FLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXH 207
Query: 297 GIRCNVILPGFIETPMT 313
I C I G T T
Sbjct: 208 DIACGQIDIGNAATDXT 224
>pdb|2NTV|A Chain A, Mycobacterium Leprae Inha Bound With Pth-Nad Adduct
pdb|2NTV|B Chain B, Mycobacterium Leprae Inha Bound With Pth-Nad Adduct
Length = 268
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDK-----------VKETFT 420
K+ +E+ + VA E +G+R N++ G I T M+ V ++E +
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGAFGEEAGAQMQLLEEGWD 222
Query: 421 RLIPFK-RFGKPEEIGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ P P + + +C L S+ TG++I GG +T
Sbjct: 223 QRAPIGWNMKDPTPVAKTVCALLSEWLPATTGSIIYADGGAST 265
>pdb|4GZS|A Chain A, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Hepes
pdb|4GZS|B Chain B, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Hepes
pdb|4GZS|C Chain C, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Hepes
pdb|4GZS|D Chain D, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Hepes
pdb|4GZT|A Chain A, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Oseltamivir Carboxylate
pdb|4GZT|B Chain B, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Oseltamivir Carboxylate
pdb|4GZT|C Chain C, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Oseltamivir Carboxylate
pdb|4GZT|D Chain D, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Oseltamivir Carboxylate
pdb|4GZW|A Chain A, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Avian Sialic Acid Receptor
pdb|4GZW|B Chain B, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Avian Sialic Acid Receptor
pdb|4GZW|C Chain C, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Avian Sialic Acid Receptor
pdb|4GZW|D Chain D, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Avian Sialic Acid Receptor
pdb|4GZX|A Chain A, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Human Sialic Acid Receptor
pdb|4GZX|B Chain B, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Human Sialic Acid Receptor
pdb|4GZX|C Chain C, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Human Sialic Acid Receptor
pdb|4GZX|D Chain D, N2 Neuraminidase D151g Mutant Of ATANZANIA2052010 H3N2 IN
COMPLEX With Human Sialic Acid Receptor
Length = 393
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 15 VSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVS 74
+ +TST+S + ++E P V C + RDNW + + + D+N+K +VS
Sbjct: 186 IVHTSTLSGSAQHVEECSCYPRYPGVRC--VCRDNW-----KGSNRPIVDINIKDHSIVS 238
Query: 75 QAVCKELV 82
VC LV
Sbjct: 239 SYVCSGLV 246
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 182 VSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVS 241
+ +TST+S + ++E P V C + RDNW + + + D+N+K +VS
Sbjct: 186 IVHTSTLSGSAQHVEECSCYPRYPGVRC--VCRDNW-----KGSNRPIVDINIKDHSIVS 238
Query: 242 QAVCKELV 249
VC LV
Sbjct: 239 SYVCSGLV 246
>pdb|4GZO|A Chain A, N2 Neuraminidase Of ATANZANIA2052010 H3N2 IN COMPLEX WITH
HEPES
pdb|4GZP|A Chain A, N2 Neuraminidase Of ATANZANIA2052010 H3N2 IN COMPLEX WITH
Oseltamivir Carboxylate
pdb|4GZQ|A Chain A, N2 Neuraminidase Of ATANZANIA2052010 H3N2 IN COMPLEX WITH
SIALIC Acid
Length = 393
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 15 VSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVS 74
+ +TST+S + ++E P V C + RDNW + + + D+N+K +VS
Sbjct: 186 IVHTSTLSGSAQHVEECSCYPRYPGVRC--VCRDNW-----KGSNRPIVDINIKDHSIVS 238
Query: 75 QAVCKELV 82
VC LV
Sbjct: 239 SYVCSGLV 246
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 182 VSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFLVS 241
+ +TST+S + ++E P V C + RDNW + + + D+N+K +VS
Sbjct: 186 IVHTSTLSGSAQHVEECSCYPRYPGVRC--VCRDNW-----KGSNRPIVDINIKDHSIVS 238
Query: 242 QAVCKELV 249
VC LV
Sbjct: 239 SYVCSGLV 246
>pdb|2IE0|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh- Inh
Length = 268
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265
>pdb|2AQH|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
Length = 269
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266
>pdb|1BVR|A Chain A, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|B Chain B, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|C Chain C, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|D Chain D, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|E Chain E, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|F Chain F, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|2IDZ|A Chain A, Crystal Structure Of Wild Type Enoyl-Acp(Coa) Reductase
From Mycobacterium Tuberculosis In Complex With Nadh-Inh
Length = 268
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265
>pdb|1P44|A Chain A, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|B Chain B, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|C Chain C, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|D Chain D, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|E Chain E, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|F Chain F, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P45|A Chain A, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P45|B Chain B, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|2B35|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B36|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B37|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2AQ8|A Chain A, Crystal Structure Of Wild-type Of Enoyl-acp(coa) Reductase
From Mycobacterium Tuberculosis In Complex With Nadh.
pdb|2H7I|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
1-Cyclohexyl-5-Oxo-N-Phenylpyrrolidine-3-Carboxamide
pdb|2H7L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(3-Bromophenyl)-1-Cyclohexyl-5-Oxopyrrolidine-3-
Carboxamide
pdb|2H7M|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
1-Cyclohexyl-N-(3,5-Dichlorophenyl)-5-Oxopyrrolidine-
3-Carboxamide
pdb|2H7N|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(5-Chloro-2-Methylphenyl)-1-Cyclohexyl-5-
Oxopyrrolidine-3-Carboxamide
pdb|2H7P|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(3-Chloro-2-Methylphenyl)-1-Cyclohexyl- 5-
Oxopyrrolidine-3-Carboxamide
pdb|2NSD|A Chain A, Enoyl Acyl Carrier Protein Reductase Inha In Complex With
N- (4-Methylbenzoyl)-4-Benzylpiperidine
pdb|2NSD|B Chain B, Enoyl Acyl Carrier Protein Reductase Inha In Complex With
N- (4-Methylbenzoyl)-4-Benzylpiperidine
pdb|2PR2|A Chain A, Structure Of Mycobacterium Tuberculosis Enoyl-Acp
Reductase With Bound Inh-Nadp.
pdb|3FNE|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|B Chain B, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|C Chain C, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|D Chain D, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNF|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|B Chain B, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|C Chain C, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|D Chain D, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNG|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNH|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|2X22|A Chain A, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X22|B Chain B, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|A Chain A, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|B Chain B, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|E Chain E, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|G Chain G, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|3OEW|A Chain A, Crystal Structure Of Wild-Type Inha:nadh Complex
pdb|4DRE|A Chain A, Mycobacterium Tuberculosis Inha In Complex With Nadh
Length = 269
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266
>pdb|2IEB|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh- Inh
pdb|2IED|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|B Chain B, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|C Chain C, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|D Chain D, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
Length = 268
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265
>pdb|2H9I|A Chain A, Mycobacterium Tuberculosis Inha Bound With Eth-Nad Adduct
pdb|2NTJ|A Chain A, Mycobacterium Tuberculosis Inha Bound With Pth-Nad Adduct
pdb|2NTJ|B Chain B, Mycobacterium Tuberculosis Inha Bound With Pth-Nad Adduct
pdb|1ENY|A Chain A, Crystal Structure And Function Of The Isoniazid Target Of
Mycobacterium Tuberculosis
pdb|1ZID|A Chain A, Long Fatty Acid Chain Enoyl-Acp Reductase (Inha) In
Complex With An Isonicotinic-Acyl-Nadh Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265
>pdb|2NV6|A Chain A, Mycobacterium Tuberculosis Inha (S94a) Bound With Inh-Nad
Adduct
pdb|1ENZ|A Chain A, Crystal Structure And Function Of The Isoniazid Target Of
Mycobacterium Tuberculosis
Length = 268
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 222
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 223 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265
>pdb|2AQI|A Chain A, Crystal Structure Of Isoniazid-Resistant I47t
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
Length = 269
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266
>pdb|2AQK|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
pdb|4DTI|A Chain A, Mycobacterium Tuberculosis Inha-S94a Mutant In Complex
With Nadh
Length = 269
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266
>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|B Chain B, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|C Chain C, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|D Chain D, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
Length = 323
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 25/115 (21%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVP----------------D 413
++ KA +E+ T+ +A + + IR N I G +++ T + D
Sbjct: 194 SSAKAALESDTRVLAYYLGRKYNIRINTISAGPLKSRAATAINKFNNNQKNNMNSSGETD 253
Query: 414 KVKETFT--------RLIPFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
K +F + P K+ ++G V FL S SS +TG I V GL
Sbjct: 254 KQNYSFIDYAIDYSEKYAPLKKKLLSTDVGSVASFLLSKESSAVTGQTIYVDNGL 308
>pdb|4DQU|A Chain A, Mycobacterium Tuberculosis Inha-D148g Mutant In Complex
With Nadh
Length = 269
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGGLAT 462
+ + + +C L SD TG +I GG T
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 11/160 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVN--CAGI-----TRDNWFLKLTEKDFQQVFDVN 66
D S S + + + + +VLVN AG+ TR+ F + + + +V
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 67 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 126
L+G + S + +V G + M Y KA + A E+
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSP--GSLQYMFNVPYGVGKAACDKLAADCAHEL 179
Query: 127 ATFGIRCNVILPGFIETPMITSVPDKVKETFTRLIPLKRF 166
G+ C + PG ++T ++ KE + LK+F
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKE--HMAKEEVLQDPVLKQF 217
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 181 DVSNTSTISTAMSTIKEKFSRPPNVLVN--CAGI-----TRDNWFLKLTEKDFQQVFDVN 233
D S S + + + + +VLVN AG+ TR+ F + + + +V
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 234 LKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEM 293
L+G + S + +V G + M Y KA + A E+
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSP--GSLQYMFNVPYGVGKAACDKLAADCAHEL 179
Query: 294 ATFGIRCNVILPGFIETPM 312
G+ C + PG ++T +
Sbjct: 180 RRHGVSCVSLWPGIVQTEL 198
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L+L D+ + A++A + F ++LVN A L K F VN +
Sbjct: 65 LALKCDIREEDQVRAAVAATVDTFGGI-DILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 69 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMG-QSNYAATKAGVEAFTKSVAMEMA 127
G+F+ +QA L++ G + Y K G T +A E
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFG 183
Query: 128 TFGIRCNVILPG-FIETPMITSVP 150
G+ N + P I T I +P
Sbjct: 184 PQGVAINALWPRTVIATDAINXLP 207
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 2/131 (1%)
Query: 176 LSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 235
L+L D+ + A++ + F ++LVN A L K F VN +
Sbjct: 65 LALKCDIREEDQVRAAVAATVDTFGGI-DILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 236 GTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMG-QSNYAATKAGVEAFTKSVAMEMA 294
G+F+ +QA L++ G + Y K G T +A E
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFG 183
Query: 295 TFGIRCNVILP 305
G+ N + P
Sbjct: 184 PQGVAINALWP 194
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 59/146 (40%), Gaps = 6/146 (4%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+ H + +D SN I ++ +K + ++LVN AG+ + + ++ F
Sbjct: 79 GAKVH-TFVVDCSNREDIYSSAKKVKAEIGDV-SILVNNAGVVYTSDLFATQDPQIEKTF 136
Query: 64 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 123
+VN+ F ++A + + G + Y ++K F K++
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLT 195
Query: 124 MEMATF---GIRCNVILPGFIETPMI 146
E+A G++ + P F+ T I
Sbjct: 196 DELAALQITGVKTTCLCPNFVNTGFI 221
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 12/167 (7%)
Query: 171 GSSTHLSLPMDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 230
G+ H + +D SN I ++ +K + ++LVN AG+ + + ++ F
Sbjct: 79 GAKVH-TFVVDCSNREDIYSSAKKVKAEIGDV-SILVNNAGVVYTSDLFATQDPQIEKTF 136
Query: 231 DVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVA 290
+VN+ F ++A + + G + Y ++K F K++
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLT 195
Query: 291 MEMATF---GIRCNVILP-----GFIETPMTTSVPD-KVKETFTRLI 328
E+A G++ + P GFI+ P T+ P + +E RL+
Sbjct: 196 DELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLM 242
>pdb|3OF2|A Chain A, Crystal Structure Of Inha_t266d:nadh Complex
Length = 269
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGG 459
+ + + +C L SD TG +I GG
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263
>pdb|3OEY|A Chain A, Crystal Structure Of Inha_t266e:nadh Complex
Length = 269
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 373 TKAGVEAFTKSVAMEMATFGIRCNVILPGFIET-PMTTCVPDKVKETFTRLIPFKRFGKP 431
K+ +E+ + VA E +G+R N++ G I T M+ V + E I G
Sbjct: 164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223
Query: 432 EE------------IGEVICFLASDRSSYITGTLIKVTGG 459
+ + + +C L SD TG +I GG
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263
>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH
8.0 AND Room Temperature
pdb|1ENP|A Chain A, Brassica Napus Enoyl Acp ReductaseNADH BINARY COMPLEX AT
PH 8.0 AND Room Temperature
Length = 312
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVP--DKVKETFTRLIPFKR 427
++ KA +E+ T+ +A E IR N I G + + + D + E P ++
Sbjct: 203 SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQK 262
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+E+G FL S +S ITG I V GL
Sbjct: 263 TLTADEVGNAAAFLVSPLASAITGATIYVDNGL 295
>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed
With Nad+ And Thienodiazaborine
pdb|1CWU|B Chain B, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed
With Nad+ And Thienodiazaborine
Length = 296
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVP--DKVKETFTRLIPFKR 427
++ KA +E+ T+ +A E IR N I G + + + D + E P ++
Sbjct: 192 SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQK 251
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+E+G FL S +S ITG I V GL
Sbjct: 252 TLTADEVGNAAAFLVSPLASAITGATIYVDNGL 284
>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier
Protein Reductase Complexed With Nad And Triclosan
Length = 297
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVP--DKVKETFTRLIPFKR 427
++ KA +E+ T+ +A E IR N I G + + + D + E P ++
Sbjct: 193 SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQK 252
Query: 428 FGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
+E+G FL S +S ITG I V GL
Sbjct: 253 TLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 14/177 (7%)
Query: 140 FIETPMITSVPDKVKETFTRLIPLKRFGKPEGSSTHLSLPMDVSNTSTISTAMSTIKEKF 199
F+ +V DK E L + + L + DV + A S +F
Sbjct: 25 FVAEGAKVAVLDKSAERLAEL-------ETDHGDNVLGIVGDVRSLEDQKQAASRCVARF 77
Query: 200 SRPPNVLVNCAGITRDNWFLKLTEKD----FQQVFDVNLKGTFLVSQAVCKELVETKXXX 255
+ ++ N + L E+ F +VF +N+KG +A LV ++
Sbjct: 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--G 135
Query: 256 XXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
G N G Y A K + + +A E+A + +R N + G I + +
Sbjct: 136 NVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDL 191
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 21/173 (12%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD----FQQVFD 64
L + DV + A S +F + ++ N + L E+ F +VF
Sbjct: 54 LGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFH 113
Query: 65 VNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAFTKSVAM 124
+N+KG +A LV ++ G N G Y A K + + +A
Sbjct: 114 INVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAF 171
Query: 125 EMATFGIRCNVILPGFIETPM------------ITSVPDKVKETFTRLIPLKR 165
E+A + +R N + G I + + I++VP + + ++P+ R
Sbjct: 172 ELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVP--LADMLKSVLPIGR 221
>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|C Chain C, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|D Chain D, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
Length = 260
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 58 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 117
+F + F V+ +L++ C+ L+ V + G+ Y ATKAG+E+
Sbjct: 121 NFTRXFSVHXLAPYLINLH-CEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLES 179
Query: 118 FTKSVAMEMATFGIRCNVILPGFI 141
T S A A ++ N I P +
Sbjct: 180 LTLSFAARFAPL-VKVNGIAPALL 202
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 225 DFQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEA 284
+F + F V+ +L++ C+ L+ V + G+ Y ATKAG+E+
Sbjct: 121 NFTRXFSVHXLAPYLINLH-CEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLES 179
Query: 285 FTKSVAMEMATFGIRCNVILPGFI 308
T S A A ++ N I P +
Sbjct: 180 LTLSFAARFAPL-VKVNGIAPALL 202
>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1A4U|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1B16|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B16|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B14|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B14|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B15|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B15|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B2L|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis:
Ternary Complex With Nad-Cyclohexanone
pdb|1SBY|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
pdb|1SBY|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
Length = 254
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
Y+A+KA V +FT S+A G+ I PG TP++
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV 189
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
Y+A+KA V +FT S+A G+ I PG TP+
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 407
Y+A+KA V +FT S+A G+ I PG TP+
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ5|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|C Chain C, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|D Chain D, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|E Chain E, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|F Chain F, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
Length = 254
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 108 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMI 146
Y+A+KA V +FT S+A G+ I PG TP++
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV 189
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 312
Y+A+KA V +FT S+A G+ I PG TP+
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 370 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPM 407
Y+A+KA V +FT S+A G+ I PG TP+
Sbjct: 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 180 MDVSNTSTISTAMSTIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 239
+DV + IS A+ +KF ++LVN A L K + +VN +GT+L
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGI-DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166
Query: 240 VSQAVCKELVETK 252
S+A L ++K
Sbjct: 167 ASKACIPYLKKSK 179
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKGTFL 72
+DV + IS A+ +KF ++LVN A L K + +VN +GT+L
Sbjct: 108 VDVRDEQQISAAVEKAIKKFGGI-DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166
Query: 73 VSQAVCKELVETK 85
S+A L ++K
Sbjct: 167 ASKACIPYLKKSK 179
>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate.
pdb|3IAH|B Chain B, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate
Length = 256
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 222 TEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAAT 278
+E+D +Q V VN+ TF ++QA+ L+++ VG+ G YA +
Sbjct: 113 SEQDPQIWQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSS-VGRQGRANWGAYATS 171
Query: 279 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSV-----PDKVK 321
K E + +A E +R N I PG T S P K+K
Sbjct: 172 KFATEGXXQVLADEYQNRSLRVNCINPGGTRTSXRASAFPTEDPQKLK 219
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 55 TEKD---FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAAT 111
+E+D +Q V VN+ TF ++QA+ L+++ VG+ G YA +
Sbjct: 113 SEQDPQIWQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSS-VGRQGRANWGAYATS 171
Query: 112 KAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMITSV-----PDKVK 154
K E + +A E +R N I PG T S P K+K
Sbjct: 172 KFATEGXXQVLADEYQNRSLRVNCINPGGTRTSXRASAFPTEDPQKLK 219
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase,
Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 226 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 285
+Q V VN+ TF ++QA+ L+++ VG+ G YAA+K E
Sbjct: 117 WQDVXQVNVNATFXLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGX 175
Query: 286 TKSVAMEMATFGIRCNVILPGFIETPMTTSV-----PDKVK 321
+ +A E +R N I PG T M S P K+K
Sbjct: 176 XQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLK 215
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 59 FQQVFDVNLKGTFLVSQAVCKELVETKXXXXXXXXXXXVGQMGNMGQSNYAATKAGVEAF 118
+Q V VN+ TF ++QA+ L+++ VG+ G YAA+K E
Sbjct: 117 WQDVXQVNVNATFXLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGX 175
Query: 119 TKSVAMEMATFGIRCNVILPGFIETPMITSV-----PDKVK 154
+ +A E +R N I PG T M S P K+K
Sbjct: 176 XQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLK 215
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 275 YAATKAGVEAFTKSVAMEMATFGIRCNVILPGFIETPMTTSVPDKVKE 322
Y +KA + A+T+ +A ++ F + C + PG ++T M + + E
Sbjct: 236 YTTSKACLNAYTRVLANKIPKFQVNC--VCPGLVKTEMNYGIGNYTAE 281
>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase
pdb|2PTG|B Chain B, Crystal Structure Of Eimeria Tenella Enoyl Reductase
Length = 319
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 371 AATKAGVEAFTKSVAMEMA-TFGIRCNVILPGFIETPMTTCVPDKVKETFTRLI------ 423
++ KA +E+ +++A E +R N I G +++ + + +TF L
Sbjct: 207 SSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEA 266
Query: 424 --PFKRFGKPEEIGEVICFLASDRSSYITGTLIKVTGGL 460
P ++ + +++G FL S + +TG + V GL
Sbjct: 267 NAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,595,076
Number of Sequences: 62578
Number of extensions: 423451
Number of successful extensions: 2143
Number of sequences better than 100.0: 307
Number of HSP's better than 100.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 863
Number of HSP's gapped (non-prelim): 839
length of query: 462
length of database: 14,973,337
effective HSP length: 102
effective length of query: 360
effective length of database: 8,590,381
effective search space: 3092537160
effective search space used: 3092537160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)