BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3450
(432 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332020765|gb|EGI61169.1| Ras-related protein Rab-40C [Acromyrmex echinatior]
Length = 296
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/387 (57%), Positives = 239/387 (61%), Gaps = 112/387 (28%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V R+AE YA KN+MAFFEVSPLCDFNIRES
Sbjct: 117 EEHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNRMAFFEVSPLCDFNIRES------ 170
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 171 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 192
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 193 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 230
Query: 354 MTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
MT+ + + + + S H +KLRF + L TP G+
Sbjct: 231 MTTTSQLRYNGNRSLSSSKSLGSHHRKLRFVGVGHNNGGLSTP---------------GS 275
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
S S+ S +SCVGRNSC VS
Sbjct: 276 SPGSITDS------RTSCVGRNSCTVS 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|307190719|gb|EFN74635.1| Ras-related protein Rab-40C [Camponotus floridanus]
Length = 293
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/386 (57%), Positives = 240/386 (62%), Gaps = 113/386 (29%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V R+AE YA KN+MAFFEVSPLCDFNIRES
Sbjct: 117 EEHAPGVPKVLVGNRLHLAFKRQVGERDAETYAAKNRMAFFEVSPLCDFNIRES------ 170
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 171 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 192
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 193 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 230
Query: 354 MTSYTTM-------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGAS 406
MT+ T + + + S H +KLRF H+ L TP G+S
Sbjct: 231 MTTTTQLRYNGRSSSSSKSLGSHHRKLRFVGV--GHNGLSTP---------------GSS 273
Query: 407 SASVKVSHSQKSKHSSCVGRNSCVVS 432
S+ S +SCVGRNSC VS
Sbjct: 274 PGSITDS------RTSCVGRNSCTVS 293
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|380028996|ref|XP_003698169.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Apis florea]
Length = 294
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/387 (56%), Positives = 239/387 (61%), Gaps = 114/387 (29%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EEHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 170
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 171 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 192
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY+I+QLPLP IKSHLKSYA
Sbjct: 193 ----------------------VLSLQELACRAIVARTTVYSIDQLPLPKSIKSHLKSYA 230
Query: 354 MTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
MT+ + + + + S H +KLRF H+ L TP G+
Sbjct: 231 MTTTSQLRYNGNRSLSSSKSLGSHHRKLRFVGV--GHNGLSTP---------------GS 273
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
S S+ S +SCVGRNSC +S
Sbjct: 274 SPGSITDS------RTSCVGRNSCTIS 294
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|110774231|ref|XP_397266.3| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Apis
mellifera]
gi|340720789|ref|XP_003398812.1| PREDICTED: ras-related protein Rab-40C-like [Bombus terrestris]
gi|350398070|ref|XP_003485078.1| PREDICTED: ras-related protein Rab-40C-like [Bombus impatiens]
Length = 294
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/387 (56%), Positives = 238/387 (61%), Gaps = 114/387 (29%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EEHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 170
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 171 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 192
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 193 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 230
Query: 354 MTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
MT+ + + + + S H +KLRF H+ L TP G+
Sbjct: 231 MTTTSQLRYNGNRSLSSSKSLGSHHRKLRFVGV--GHNGLSTP---------------GS 273
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
S S+ S +SCVGRNSC +S
Sbjct: 274 SPGSITDS------RTSCVGRNSCTIS 294
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|307205443|gb|EFN83775.1| Ras-related protein Rab-40C [Harpegnathos saltator]
Length = 295
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/394 (55%), Positives = 240/394 (60%), Gaps = 115/394 (29%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
TKP +KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS
Sbjct: 9 TKP--RQEKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS--- 53
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDIT+KWSFDGI
Sbjct: 54 ----AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITSKWSFDGI 109
Query: 167 DRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
DRWLKEVEEHAPGVPKVLVGNRLHLAF R V R+AE YA+KN M+FFEVSPLCDFNIRE
Sbjct: 110 DRWLKEVEEHAPGVPKVLVGNRLHLAFRRQVGQRDAEAYAVKNHMSFFEVSPLCDFNIRE 169
Query: 227 SFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHL 286
S F+ELSR ALQRNGMERL R NK
Sbjct: 170 S---------------------------------FSELSRMALQRNGMERLLRPNK---- 192
Query: 287 LTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIK 346
V+SLQEL CRAIVARTTVY I+QLPLP IK
Sbjct: 193 -----------------------------VLSLQELACRAIVARTTVYGIDQLPLPTSIK 223
Query: 347 SHLKSYAMTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLV 398
SHLKSYA+T+ + + + + S H +KLRF + L
Sbjct: 224 SHLKSYAITTTSQLRYNGNRSLSSSKSLGSHHRKLRFVVGHHNNGL-------------- 269
Query: 399 SCGTGGASSASVKVSHSQKSKHSSCVGRNSCVVS 432
T G+S S+ S +SCVGRNSC VS
Sbjct: 270 --STPGSSPGSITDS------RTSCVGRNSCTVS 295
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 29/33 (87%), Gaps = 2/33 (6%)
Query: 3 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSG 35
TKP +KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 9 TKP--RQEKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|383848095|ref|XP_003699687.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Megachile
rotundata]
Length = 294
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/387 (55%), Positives = 235/387 (60%), Gaps = 114/387 (29%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG+ LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGVFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EEHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 170
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERL RSNK
Sbjct: 171 ---------------------------FSELSRMALHRNGMERLLRSNK----------- 192
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 193 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 230
Query: 354 MTSYT--------TMTMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
+T+ + ++ + S + +KLRF ++ L TPS S + +
Sbjct: 231 ITTISQLRYNGNRSLNPSKSLGSYHRKLRFVGV--GYNGLSTPSSSPGSIT--------- 279
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
+SCVGRNSC +S
Sbjct: 280 ------------DSRTSCVGRNSCTIS 294
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|242017412|ref|XP_002429183.1| RAB-40, putative [Pediculus humanus corporis]
gi|212514061|gb|EEB16445.1| RAB-40, putative [Pediculus humanus corporis]
Length = 279
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/384 (56%), Positives = 236/384 (61%), Gaps = 120/384 (31%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYDYLLKFLLVGDSDVGKQEILSGL +G SE FCSGS AYKT
Sbjct: 10 KQYDYLLKFLLVGDSDVGKQEILSGLE----------NGPSE--FCSGS-------AYKT 50
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI RWLKEV+
Sbjct: 51 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIGRWLKEVD 110
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPKVLVGNRLHLAF R V REAE YAIKN+MAFFEVSPLC+FNIRES
Sbjct: 111 EHAPGVPKVLVGNRLHLAFKRQVGAREAEAYAIKNRMAFFEVSPLCNFNIRES------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F+ELSR AL RNGMERL RSNK
Sbjct: 164 --------------------------FSELSRMALHRNGMERLLRSNK------------ 185
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IVARTTVY+I QLPLP +IKSHLKSYAM
Sbjct: 186 ---------------------VLSLQELCCRTIVARTTVYSIEQLPLPEMIKSHLKSYAM 224
Query: 355 TSYTTMTM------TTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGASSA 408
TSY++M+M + +KL+F + S + L TP
Sbjct: 225 TSYSSMSMLPRYVLPQTKSGTFRKLKFVGSNSNNVL--TP-------------------- 262
Query: 409 SVKVSHSQKSKHSSCVGRNSCVVS 432
+V H SSC+GRNSC+VS
Sbjct: 263 --QVEH-----RSSCIGRNSCIVS 279
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/240 (66%), Positives = 165/240 (68%), Gaps = 63/240 (26%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
KQYDYLLKFLLVGDSDVGKQEILSG +E P
Sbjct: 10 KQYDYLLKFLLVGDSDVGKQEILSG---------LENGP--------------------- 39
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
S FCSGS AYKTTTILLDGKRVKLQLWD
Sbjct: 40 --------------------------SEFCSGS-------AYKTTTILLDGKRVKLQLWD 66
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI RWLKEV+EHAPGVPKVLVGNRLH
Sbjct: 67 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIGRWLKEVDEHAPGVPKVLVGNRLH 126
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V REAE YAIKN+MAFFEVSPLC+FNIRESF+ELSR AL RNGMERL RSNKV
Sbjct: 127 LAFKRQVGAREAEAYAIKNRMAFFEVSPLCNFNIRESFSELSRMALHRNGMERLLRSNKV 186
>gi|193603532|ref|XP_001947621.1| PREDICTED: ras-related protein Rab-40C-like isoform 1
[Acyrthosiphon pisum]
Length = 293
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 215/324 (66%), Gaps = 83/324 (25%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
QK+YDYLLKFLLVGDSDVGKQE+L+ L DGSSESP+CSGS AYK
Sbjct: 11 QKEYDYLLKFLLVGDSDVGKQEMLNDLE----------DGSSESPYCSGS-------AYK 53
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TT ILLDGKRVKLQLWD SGQGR CTIIRSYSRGAQG+LLVYDITNKWSFDG+DRWLKEV
Sbjct: 54 TTIILLDGKRVKLQLWDASGQGRLCTIIRSYSRGAQGVLLVYDITNKWSFDGLDRWLKEV 113
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EEHAPGVPKVLVGNRLHLAF R V+ +EAE YA K+ M FEVSPLCDFNIRES
Sbjct: 114 EEHAPGVPKVLVGNRLHLAFKRQVSVKEAESYASKHHMTLFEVSPLCDFNIRES------ 167
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+EL+RRAL RNGMERL RSNK
Sbjct: 168 ---------------------------FSELARRALHRNGMERLLRSNK----------- 189
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQELCCRAIVARTT Y INQLPLP IKSHLKSYA
Sbjct: 190 ----------------------VLSLQELCCRAIVARTTQYGINQLPLPVTIKSHLKSYA 227
Query: 354 MTSYTTMTMTTSARQHTKKLRFPS 377
+TS++T++M+ +KK++ PS
Sbjct: 228 LTSFSTLSMSLPRNSASKKIKLPS 251
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/241 (62%), Positives = 163/241 (67%), Gaps = 61/241 (25%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDS 69
QK+YDYLLKFLLVGDSDVGKQE+L+ D
Sbjct: 11 QKEYDYLLKFLLVGDSDVGKQEMLN---------------------------------DL 37
Query: 70 DVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+ G E SP+CSGS AYKTT ILLDGKRVKLQLW
Sbjct: 38 EDGSSE---------------------SPYCSGS-------AYKTTIILLDGKRVKLQLW 69
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D SGQGR CTIIRSYSRGAQG+LLVYDITNKWSFDG+DRWLKEVEEHAPGVPKVLVGNRL
Sbjct: 70 DASGQGRLCTIIRSYSRGAQGVLLVYDITNKWSFDGLDRWLKEVEEHAPGVPKVLVGNRL 129
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V+ +EAE YA K+ M FEVSPLCDFNIRESF+EL+RRAL RNGMERL RSNK
Sbjct: 130 HLAFKRQVSVKEAESYASKHHMTLFEVSPLCDFNIRESFSELARRALHRNGMERLLRSNK 189
Query: 250 V 250
V
Sbjct: 190 V 190
>gi|345494425|ref|XP_001603708.2| PREDICTED: ras-related protein Rab-40C-like [Nasonia vitripennis]
Length = 321
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 217/393 (55%), Positives = 232/393 (59%), Gaps = 116/393 (29%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG+ ESPFCSGS AYK
Sbjct: 31 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAFESPFCSGS-------AYK 73
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV
Sbjct: 74 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 133
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EE APGVPKVLVGNRLHLAF R V+ R+AE+YA KN+MAFFEVSPLCDFNIRES
Sbjct: 134 EEQAPGVPKVLVGNRLHLAFKRQVSERDAELYAAKNRMAFFEVSPLCDFNIRES------ 187
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F ELSR AL RNGMERLWRSNK
Sbjct: 188 ---------------------------FCELSRMALHRNGMERLWRSNK----------- 209
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I QLPLP IKSHLKSYA
Sbjct: 210 ----------------------VLSLQELACRAIVARTTVYGIEQLPLPASIKSHLKSYA 247
Query: 354 MT--------------SYTTMTMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVS 399
MT S T T+ H + +RF + S S
Sbjct: 248 MTTVPQLRPRLHTSCGSRTLCTIKALNLGHRRCVRFVTGNSPSSGG-------------- 293
Query: 400 CGTGGASSASVKVSHSQKSKHSSCVGRNSCVVS 432
+S+ S S +SCVGRNSC +S
Sbjct: 294 -----SSTPGSSPSGSTNDSRTSCVGRNSCTIS 321
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/241 (67%), Positives = 169/241 (70%), Gaps = 61/241 (25%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDS 69
+KQYDYLLKFLLVGDSDVGKQEILSG LE A+
Sbjct: 31 EKQYDYLLKFLLVGDSDVGKQEILSG--LEDGAF-------------------------- 62
Query: 70 DVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
ES F CSGS AYKTTTILLDGKRVKLQLW
Sbjct: 63 -------------ESPF-------------CSGS-------AYKTTTILLDGKRVKLQLW 89
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE APGVPKVLVGNRL
Sbjct: 90 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEQAPGVPKVLVGNRL 149
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V+ R+AE+YA KN+MAFFEVSPLCDFNIRESF ELSR AL RNGMERLWRSNK
Sbjct: 150 HLAFKRQVSERDAELYAAKNRMAFFEVSPLCDFNIRESFCELSRMALHRNGMERLWRSNK 209
Query: 250 V 250
V
Sbjct: 210 V 210
>gi|189240504|ref|XP_969860.2| PREDICTED: similar to rab-40 [Tribolium castaneum]
Length = 274
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/382 (53%), Positives = 233/382 (60%), Gaps = 120/382 (31%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
QK YDYLLKFLLVGDSDVGKQEILS L DG++ESPFCSGS AYK
Sbjct: 10 QKPYDYLLKFLLVGDSDVGKQEILSELD----------DGAAESPFCSGS-------AYK 52
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRV+LQLWDTSGQGRFCTIIRSYSRGAQG+LLVYDITN+WSFDG+DRWLKEV
Sbjct: 53 TTTILLDGKRVRLQLWDTSGQGRFCTIIRSYSRGAQGVLLVYDITNRWSFDGLDRWLKEV 112
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+EHAPGVPKVLVGNRLH AF R V R+A+MYA ++ MAFFEVSPLC+FNI ES
Sbjct: 113 DEHAPGVPKVLVGNRLHFAFKRKVGERDAQMYANRHSMAFFEVSPLCNFNIHES------ 166
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F ELSR ALQRNGMERLWRSNK
Sbjct: 167 ---------------------------FCELSRMALQRNGMERLWRSNK----------- 188
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQELCCRAIVARTTVY+I QLPLP +KS+LKSYA
Sbjct: 189 ----------------------VLSLQELCCRAIVARTTVYSIEQLPLPTCVKSYLKSYA 226
Query: 354 MTSYTTMTMTTSARQHT--KKLRFPSAQSTHSLLDTP-SPSAATASLVSCGTGGASSASV 410
+T+ +T T +++ + +KLRF + TP SP + T
Sbjct: 227 LTTTSTQLKYTHSQRKSNGRKLRF---------ISTPTSPGSDT---------------- 261
Query: 411 KVSHSQKSKHSSCVGRNSCVVS 432
+SCV RNSC +S
Sbjct: 262 ---------RTSCVPRNSCTIS 274
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/241 (63%), Positives = 165/241 (68%), Gaps = 61/241 (25%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDS 69
QK YDYLLKFLLVGDSDVGKQEILS +
Sbjct: 10 QKPYDYLLKFLLVGDSDVGKQEILS---------------------------------EL 36
Query: 70 DVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
D G E SPFCSGS AYKTTTILLDGKRV+LQLW
Sbjct: 37 DDGAAE---------------------SPFCSGS-------AYKTTTILLDGKRVRLQLW 68
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
DTSGQGRFCTIIRSYSRGAQG+LLVYDITN+WSFDG+DRWLKEV+EHAPGVPKVLVGNRL
Sbjct: 69 DTSGQGRFCTIIRSYSRGAQGVLLVYDITNRWSFDGLDRWLKEVDEHAPGVPKVLVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
H AF R V R+A+MYA ++ MAFFEVSPLC+FNI ESF ELSR ALQRNGMERLWRSNK
Sbjct: 129 HFAFKRKVGERDAQMYANRHSMAFFEVSPLCNFNIHESFCELSRMALQRNGMERLWRSNK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|322802733|gb|EFZ22950.1| hypothetical protein SINV_10382 [Solenopsis invicta]
Length = 393
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 227/446 (50%), Positives = 255/446 (57%), Gaps = 125/446 (28%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGL---YLESRF----PRFW--LDGSSES 97
TKP +KQYDYLLKFLLVGDSDVGKQEILSGL ES F R + L S S
Sbjct: 9 TKP--RQEKQYDYLLKFLLVGDSDVGKQEILSGLEDGAAESPFCSGSGRAFQNLSMSPSS 66
Query: 98 PFCS---------GSGKYDDML-----------------------AYKTTTILLDGKRVK 125
P C G+ + L +YKTTTILLDGKRVK
Sbjct: 67 PSCHVHVTKHYWIGTTVIVERLRSKIAAPITLVSFRLVHLKLTVDSYKTTTILLDGKRVK 126
Query: 126 LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE---------- 175
LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE
Sbjct: 127 LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEVSDDLRFYPV 186
Query: 176 ----HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HAPGVPKVLVGNRLHLAF R V R+AE YA KN MAFFEVSPLCDFNIRESF+EL
Sbjct: 187 IFLTHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRESFSEL 246
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
SR AL RNGMERLWRSNK G +I+ + +L ++ R N+ +
Sbjct: 247 SRMALHRNGMERLWRSNK-GTSNIISIANSLKLLKKR----------RDNEVQ------- 288
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
F+V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKS
Sbjct: 289 --------------------FGFTVLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKS 328
Query: 352 YAMTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTG 403
YAMT+ + + + + S H +KLRF + L T
Sbjct: 329 YAMTTTSQLRYNGNRSLSSSKSLGLHHRKLRFVGVGHNNGL----------------STP 372
Query: 404 GASSASVKVSHSQKSKHSSCVGRNSC 429
G+S S+ S +SCVGRNSC
Sbjct: 373 GSSPGSITDS------RTSCVGRNSC 392
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 29/33 (87%), Gaps = 2/33 (6%)
Query: 3 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSG 35
TKP +KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 9 TKP--RQEKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|157116561|ref|XP_001658551.1| rab-40 [Aedes aegypti]
gi|108876399|gb|EAT40624.1| AAEL007661-PA [Aedes aegypti]
Length = 278
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 203/380 (53%), Positives = 231/380 (60%), Gaps = 106/380 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYLLK LLVGDSDVGKQEILSGL DGSSESPFCSGS AYKT
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGLD----------DGSSESPFCSGS------TAYKT 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDGKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG+ RWLKEVE
Sbjct: 47 TTILLDGKRVKLQVWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLSRWLKEVE 106
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPKVLVGNRLHLAF R V ++AE+YA +N+MA FE+SPLCDFNIRES
Sbjct: 107 EHAPGVPKVLVGNRLHLAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRES------- 159
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGMER+WRSNK
Sbjct: 160 --------------------------FCELARMALHRNGMERIWRSNK------------ 181
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS+LKSYA+
Sbjct: 182 ---------------------VLSLQELCCRTIVRRTSVYAIDTLPLPPSVKSYLKSYAL 220
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGASSASVKVSH 414
TS + + T +T P++ + + TP+ L G G SSAS
Sbjct: 221 TS--SQCLNTFLHHNTA----PASNAKNFKCKTPT---GHLKLHRSGIGIGSSASA---- 267
Query: 415 SQKSKHSSCVG--RNSCVVS 432
+G RNSCV+S
Sbjct: 268 ---------IGQMRNSCVIS 278
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/240 (63%), Positives = 164/240 (68%), Gaps = 60/240 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K+YDYLLK LLVGDSDVGKQEILSG D
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGL---------------------------------D 29
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
G E SPFCSGS AYKTTTILLDGKRVKLQ+WD
Sbjct: 30 DGSSE---------------------SPFCSGS------TAYKTTTILLDGKRVKLQVWD 62
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG+ RWLKEVEEHAPGVPKVLVGNRLH
Sbjct: 63 TSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLSRWLKEVEEHAPGVPKVLVGNRLH 122
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE+YA +N+MA FE+SPLCDFNIRESF EL+R AL RNGMER+WRSNKV
Sbjct: 123 LAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRESFCELARMALHRNGMERIWRSNKV 182
>gi|357623458|gb|EHJ74597.1| hypothetical protein KGM_19075 [Danaus plexippus]
Length = 289
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 201/305 (65%), Gaps = 83/305 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A K YDYLLK LLVGDSDVGKQEIL L DGS++SPFCSGS
Sbjct: 39 AAPKSYDYLLKVLLVGDSDVGKQEILQDLE----------DGSADSPFCSGS-------V 81
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD IDRWL+
Sbjct: 82 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLE 141
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVE+HAPGVPKVLVGNRLHLAF R V R+AE+YA KN MAFFEVSPLCDFNIRES
Sbjct: 142 EVEKHAPGVPKVLVGNRLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRES---- 197
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F ELSR AL RNGMERLWRSNK
Sbjct: 198 -----------------------------FCELSRMALHRNGMERLWRSNK--------- 219
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCRAIVART+VY + +LPLP+ +KSHLKS
Sbjct: 220 ------------------------VLSLQELCCRAIVARTSVYGLERLPLPSALKSHLKS 255
Query: 352 YAMTS 356
YA+++
Sbjct: 256 YAISA 260
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 176/274 (64%), Gaps = 73/274 (26%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
A K YDYLLK LLVGDSDVGKQEIL
Sbjct: 39 AAPKSYDYLLKVLLVGDSDVGKQEIL---------------------------------- 64
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
Q++ G S++SPFCSGS YKTTTILLDGKRVKLQ
Sbjct: 65 ------QDLEDG--------------SADSPFCSGS-------VYKTTTILLDGKRVKLQ 97
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD IDRWL+EVE+HAPGVPKVLVGN
Sbjct: 98 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLEEVEKHAPGVPKVLVGN 157
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V R+AE+YA KN MAFFEVSPLCDFNIRESF ELSR AL RNGMERLWRS
Sbjct: 158 RLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRESFCELSRMALHRNGMERLWRS 217
Query: 248 NKVGRKPLINFESFTELSRRALQRN----GMERL 277
NKV S EL RA+ G+ERL
Sbjct: 218 NKV--------LSLQELCCRAIVARTSVYGLERL 243
>gi|170065015|ref|XP_001867766.1| rab-40 [Culex quinquefasciatus]
gi|167882169|gb|EDS45552.1| rab-40 [Culex quinquefasciatus]
Length = 291
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 232/382 (60%), Gaps = 97/382 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYLLK LLVGDSDVGKQEILSGL DGS+ESPFCSGS AYKT
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGLD----------DGSAESPFCSGSA------AYKT 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDGKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG+ RWLKEVE
Sbjct: 47 TTILLDGKRVKLQVWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLSRWLKEVE 106
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPKVLVGNRLHLAF R V ++AE+YA +N+MA FE+SPLCDFNIRES
Sbjct: 107 EHAPGVPKVLVGNRLHLAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRES------- 159
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGMERLWRSN+
Sbjct: 160 --------------------------FCELARMALHRNGMERLWRSNR------------ 181
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+ LQELCCR IV RT+VYAI+ LPLP +KS+LKSYA+
Sbjct: 182 ---------------------VLPLQELCCRTIVRRTSVYAIDSLPLPPSVKSYLKSYAL 220
Query: 355 TSYTTMTMTTSAR---QHTKKLRFPSAQSTHSL-LDTPSPSAATASLVSCGTGGASSASV 410
TS ++ + A+ H + P A + +L TP+ S G+G +S
Sbjct: 221 TSSQCLSSSHQAQALLAHNGRPLAPLASNAKNLKCKTPTGS---------GSGQWHRSSG 271
Query: 411 KVSHSQKSKHSSCVGRNSCVVS 432
+ ++ RNSCV+S
Sbjct: 272 TGIGAGGGIGNNV--RNSCVIS 291
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/240 (63%), Positives = 164/240 (68%), Gaps = 60/240 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K+YDYLLK LLVGDSDVGKQEILSG D
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGL---------------------------------D 29
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
G E SPFCSGS AYKTTTILLDGKRVKLQ+WD
Sbjct: 30 DGSAE---------------------SPFCSGSA------AYKTTTILLDGKRVKLQVWD 62
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG+ RWLKEVEEHAPGVPKVLVGNRLH
Sbjct: 63 TSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLSRWLKEVEEHAPGVPKVLVGNRLH 122
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE+YA +N+MA FE+SPLCDFNIRESF EL+R AL RNGMERLWRSN+V
Sbjct: 123 LAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRESFCELARMALHRNGMERLWRSNRV 182
>gi|307694589|gb|ADN84947.1| Rab40 [Biston betularia]
Length = 290
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 199/305 (65%), Gaps = 83/305 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A K YDYLLK LLVGDSDVGKQEIL L DGS++SPFCSGS A
Sbjct: 40 AAPKSYDYLLKVLLVGDSDVGKQEILQDLE----------DGSADSPFCSGS-------A 82
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD IDRWL+
Sbjct: 83 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLE 142
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVE+HAPGVPKVLVGNRLHLAF R V R+AE+YA KN MAFFEVSPLCDFNIRES
Sbjct: 143 EVEKHAPGVPKVLVGNRLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRES---- 198
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F ELSR AL RNGMERLWRSNK
Sbjct: 199 -----------------------------FCELSRMALTRNGMERLWRSNK--------- 220
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCRAIVART+VY + +LPLP +KS LKS
Sbjct: 221 ------------------------VLSLQELCCRAIVARTSVYGLERLPLPTALKSQLKS 256
Query: 352 YAMTS 356
YA ++
Sbjct: 257 YATSA 261
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/274 (60%), Positives = 177/274 (64%), Gaps = 73/274 (26%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
A K YDYLLK LLVGDSDVGKQEIL
Sbjct: 40 AAPKSYDYLLKVLLVGDSDVGKQEIL---------------------------------- 65
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
Q++ G S++SPFCSGS AYKTTTILLDGKRVKLQ
Sbjct: 66 ------QDLEDG--------------SADSPFCSGS-------AYKTTTILLDGKRVKLQ 98
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD IDRWL+EVE+HAPGVPKVLVGN
Sbjct: 99 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLEEVEKHAPGVPKVLVGN 158
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V R+AE+YA KN MAFFEVSPLCDFNIRESF ELSR AL RNGMERLWRS
Sbjct: 159 RLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRESFCELSRMALTRNGMERLWRS 218
Query: 248 NKVGRKPLINFESFTELSRRALQRN----GMERL 277
NKV S EL RA+ G+ERL
Sbjct: 219 NKV--------LSLQELCCRAIVARTSVYGLERL 244
>gi|347964608|ref|XP_316810.5| AGAP000841-PA [Anopheles gambiae str. PEST]
gi|333469424|gb|EAA12147.5| AGAP000841-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 214/329 (65%), Gaps = 82/329 (24%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYLLK LLVGDSDVGKQEILSGL DGS+ESPFCSGSG A+KT
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGLD----------DGSTESPFCSGSGT-----AHKT 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDGKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG++RWLKEVE
Sbjct: 48 TTILLDGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLNRWLKEVE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPKVLVGNRLHLAF R V ++AE+YA +N+MA FE+SPLCDFNIRES
Sbjct: 108 EHAPGVPKVLVGNRLHLAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRES------- 160
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGMER+WR+NK
Sbjct: 161 --------------------------FCELARMALHRNGMERIWRTNK------------ 182
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR+I RT VY I+ LPLP +KS+L+SYA+
Sbjct: 183 ---------------------VLSLQELCCRSICRRTNVYTIDSLPLPPSVKSYLRSYAL 221
Query: 355 TSYTTM-TMTTSARQHTKKLRFPSAQSTH 382
TS + T+ ++ K L+ +A S H
Sbjct: 222 TSSQCLNTVLNNSASIAKNLKCKTATSYH 250
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/240 (62%), Positives = 166/240 (69%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K+YDYLLK LLVGDSDVGKQEILSG D
Sbjct: 3 KEYDYLLKVLLVGDSDVGKQEILSGL---------------------------------D 29
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
G E SPFCSGSG A+KTTTILLDGKRVKLQ+WD
Sbjct: 30 DGSTE---------------------SPFCSGSGT-----AHKTTTILLDGKRVKLQIWD 63
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG++RWLKEVEEHAPGVPKVLVGNRLH
Sbjct: 64 TSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLNRWLKEVEEHAPGVPKVLVGNRLH 123
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE+YA +N+MA FE+SPLCDFNIRESF EL+R AL RNGMER+WR+NKV
Sbjct: 124 LAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRESFCELARMALHRNGMERIWRTNKV 183
>gi|289741099|gb|ADD19297.1| GTP-binding protein SEC4 [Glossina morsitans morsitans]
Length = 252
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 208/329 (63%), Gaps = 83/329 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EILSGL D SSESPFCSG+ AYKT
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSGLE----------DASSESPFCSGN-------AYKT 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEVE
Sbjct: 46 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVE 105
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPG+PKVLVGNRLHLAF R V ++AE+YA +N M+ FE+SPLCDFNIRES
Sbjct: 106 EHAPGIPKVLVGNRLHLAFKRQVAAKQAELYASRNNMSCFEISPLCDFNIRES------- 158
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGMER+WR+NK
Sbjct: 159 --------------------------FCELARMALHRNGMERIWRNNK------------ 180
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS+LKSYA+
Sbjct: 181 ---------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSNLKSYAL 219
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
T+ +H + + P++ +S
Sbjct: 220 TTSQCYNSLNHNTKHKNRSKTPTSSGRNS 248
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 22/25 (88%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSG 35
K YDYLLK LLVGDSDVGK EILSG
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSG 27
>gi|380028998|ref|XP_003698170.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Apis florea]
Length = 279
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 203/387 (52%), Positives = 224/387 (57%), Gaps = 129/387 (33%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EE ++F R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EE---------------VSFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 155
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 156 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 177
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY+I+QLPLP IKSHLKSYA
Sbjct: 178 ----------------------VLSLQELACRAIVARTTVYSIDQLPLPKSIKSHLKSYA 215
Query: 354 MTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
MT+ + + + + S H +KLRF H+ L TP G+
Sbjct: 216 MTTTSQLRYNGNRSLSSSKSLGSHHRKLRFVGV--GHNGLSTP---------------GS 258
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
S S+ S +SCVGRNSC +S
Sbjct: 259 SPGSITDS------RTSCVGRNSCTIS 279
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|328782107|ref|XP_003250086.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Apis
mellifera]
Length = 279
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/387 (52%), Positives = 223/387 (57%), Gaps = 129/387 (33%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EE ++F R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EE---------------VSFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 155
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERLWRSNK
Sbjct: 156 ---------------------------FSELSRMALHRNGMERLWRSNK----------- 177
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 178 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 215
Query: 354 MTSYTTM--------TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
MT+ + + + + S H +KLRF H+ L TP G+
Sbjct: 216 MTTTSQLRYNGNRSLSSSKSLGSHHRKLRFVGV--GHNGLSTP---------------GS 258
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
S S+ S +SCVGRNSC +S
Sbjct: 259 SPGSITDS------RTSCVGRNSCTIS 279
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|195162562|ref|XP_002022123.1| GL25374 [Drosophila persimilis]
gi|194104084|gb|EDW26127.1| GL25374 [Drosophila persimilis]
Length = 265
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 208/332 (62%), Gaps = 79/332 (23%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L E FP ESPFCSG+ +L A
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSNL--EDPFP--------ESPFCSGNDCTSHILQTVA 55
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 56 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 115
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 116 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 171
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 172 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 193
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKS
Sbjct: 194 ------------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKS 229
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
YA+T+ T + + + + P++ S +S
Sbjct: 230 YALTTSQCYNSLTQSSKSKNRCKTPTSSSRNS 261
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 163/243 (67%), Gaps = 57/243 (23%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSN----------------------------------- 30
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---AYKTTTILLDGKRVKLQ 127
LE FP ESPFCSG+ +L AYKTTTILL+GKRVKLQ
Sbjct: 31 -----------LEDPFP--------ESPFCSGNDCTSHILQTVAYKTTTILLEGKRVKLQ 71
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+EHAPG+PKVLVGN
Sbjct: 72 LWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGN 131
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRS
Sbjct: 132 RLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRS 191
Query: 248 NKV 250
NKV
Sbjct: 192 NKV 194
>gi|194895903|ref|XP_001978371.1| GG19552 [Drosophila erecta]
gi|190650020|gb|EDV47298.1| GG19552 [Drosophila erecta]
Length = 262
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 208/332 (62%), Gaps = 79/332 (23%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM---LA 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ + +A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCTSHIFQTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKS
Sbjct: 191 ------------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKS 226
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
YA+T+ T + + + + P++ S +S
Sbjct: 227 YALTTSQCFNSLTQSSKSKNRCKTPTSSSRNS 258
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/240 (49%), Positives = 143/240 (59%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++ + + +
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----SPFCSGNDCTSHIFQTVAYKTTT 57
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ +L G ++ + W D S + FC+
Sbjct: 58 I----LLEGKRVK---LQLW-DTSGQGRFCT----------------------------- 80
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
IIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+EHAPG+PKVLVGNRLH
Sbjct: 81 ---------IIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGNRLH 131
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 132 LAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 191
>gi|198470680|ref|XP_001355366.2| GA15118 [Drosophila pseudoobscura pseudoobscura]
gi|198145569|gb|EAL32423.2| GA15118 [Drosophila pseudoobscura pseudoobscura]
Length = 262
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 208/332 (62%), Gaps = 79/332 (23%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L E FP ESPFCSG+ +L A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNL--EDPFP--------ESPFCSGNDCTSHILQTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKS
Sbjct: 191 ------------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKS 226
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
YA+T+ T + + + + P++ S +S
Sbjct: 227 YALTTSQCYNSLTQSSKSKNRCKTPTSSSRNS 258
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 163/243 (67%), Gaps = 57/243 (23%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSN----------------------------------- 27
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---AYKTTTILLDGKRVKLQ 127
LE FP ESPFCSG+ +L AYKTTTILL+GKRVKLQ
Sbjct: 28 -----------LEDPFP--------ESPFCSGNDCTSHILQTVAYKTTTILLEGKRVKLQ 68
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+EHAPG+PKVLVGN
Sbjct: 69 LWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGN 128
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRS
Sbjct: 129 RLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRS 188
Query: 248 NKV 250
NKV
Sbjct: 189 NKV 191
>gi|195352639|ref|XP_002042819.1| GM11551 [Drosophila sechellia]
gi|195477964|ref|XP_002100358.1| GE16214 [Drosophila yakuba]
gi|195553786|ref|XP_002076751.1| GD24662 [Drosophila simulans]
gi|194126866|gb|EDW48909.1| GM11551 [Drosophila sechellia]
gi|194187882|gb|EDX01466.1| GE16214 [Drosophila yakuba]
gi|194202741|gb|EDX16317.1| GD24662 [Drosophila simulans]
Length = 252
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 206/329 (62%), Gaps = 83/329 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ AYKT
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGN-------AYKT 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+
Sbjct: 46 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVD 105
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 106 EHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES------- 158
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGME +WRSNK
Sbjct: 159 --------------------------FCELARMALHRNGMEHIWRSNK------------ 180
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKSYA+
Sbjct: 181 ---------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYAL 219
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
T+ T + + + + P++ S +S
Sbjct: 220 TTSQCFNSLTQSSKSKNRCKTPTSSSRNS 248
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 21/25 (84%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSG 35
K YDYLLK LLVGDSDVGK EILS
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSN 27
>gi|24641535|ref|NP_727611.1| Rab40, isoform B [Drosophila melanogaster]
gi|22832135|gb|AAN09309.1| Rab40, isoform B [Drosophila melanogaster]
gi|54650586|gb|AAV36872.1| RE54550p [Drosophila melanogaster]
Length = 265
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 208/332 (62%), Gaps = 79/332 (23%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ +L A
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCTSHILQTVA 55
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 56 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 115
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLC+FNIRES
Sbjct: 116 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRES---- 171
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 172 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 193
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKS
Sbjct: 194 ------------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKS 229
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
YA+T+ T + + + + P++ S +S
Sbjct: 230 YALTTSQCFNSLTQSSKSKNRCKTPTSSSRNS 261
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 144/240 (60%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++L+ + +
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----SPFCSGNDCTSHILQTVAYKTTT 60
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ +L G ++ + W D S + FC
Sbjct: 61 I----LLEGKRVK---LQLW-DTSGQGRFC------------------------------ 82
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+EHAPG+PKVLVGNRLH
Sbjct: 83 --------TIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGNRLH 134
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE YA +N M+ FE+SPLC+FNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 135 LAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELARMALHRNGMEHIWRSNKV 194
>gi|194768018|ref|XP_001966111.1| GF19504 [Drosophila ananassae]
gi|190622996|gb|EDV38520.1| GF19504 [Drosophila ananassae]
Length = 262
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 208/332 (62%), Gaps = 79/332 (23%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ +L A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCTSHILKTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V++LQELCCR IV RT+VYAI+ LPLP +KS LKS
Sbjct: 191 ------------------------VLTLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKS 226
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
YA+T+ T + + + + P++ S +S
Sbjct: 227 YALTTSQCYNSLTQSSKSKNRCKTPTSGSRNS 258
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 158/240 (65%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++LK
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----SPFCSGNDCTSHILK-------- 49
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+AYKTTTILL+GKRVKLQLWD
Sbjct: 50 --------------------------------------TVAYKTTTILLEGKRVKLQLWD 71
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+EHAPG+PKVLVGNRLH
Sbjct: 72 TSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGNRLH 131
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 132 LAFKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 191
>gi|24641533|ref|NP_572800.2| Rab40, isoform A [Drosophila melanogaster]
gi|22832134|gb|AAF48164.2| Rab40, isoform A [Drosophila melanogaster]
Length = 255
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 206/329 (62%), Gaps = 83/329 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ AYKT
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGN-------AYKT 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+
Sbjct: 49 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVD 108
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLC+FNIRES
Sbjct: 109 EHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRES------- 161
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGME +WRSNK
Sbjct: 162 --------------------------FCELARMALHRNGMEHIWRSNK------------ 183
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKSYA+
Sbjct: 184 ---------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYAL 222
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
T+ T + + + + P++ S +S
Sbjct: 223 TTSQCFNSLTQSSKSKNRCKTPTSSSRNS 251
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 21/25 (84%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSG 35
K YDYLLK LLVGDSDVGK EILS
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSN 30
>gi|16769094|gb|AAL28766.1| LD16331p [Drosophila melanogaster]
Length = 252
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 206/329 (62%), Gaps = 83/329 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ AYKT
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGN-------AYKT 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEV+
Sbjct: 46 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVD 105
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLC+FNIRES
Sbjct: 106 EHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRES------- 158
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGME +WRSNK
Sbjct: 159 --------------------------FCELARMALHRNGMEHIWRSNK------------ 180
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKSYA+
Sbjct: 181 ---------------------VLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYAL 219
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
T+ T + + + + P++ S +S
Sbjct: 220 TTSQCFNSLTQSSKSKNRCKTPTSSSRNS 248
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 21/25 (84%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSG 35
K YDYLLK LLVGDSDVGK EILS
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSN 27
>gi|195396903|ref|XP_002057068.1| GJ16552 [Drosophila virilis]
gi|194146835|gb|EDW62554.1| GJ16552 [Drosophila virilis]
Length = 262
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 210/335 (62%), Gaps = 85/335 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ +L A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCSSHILQTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVEEHAPG+PKVLVGNRLHLA+ R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVEEHAPGIPKVLVGNRLHLAYKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ L LP +KS LKS
Sbjct: 191 ------------------------VLSLQELCCRTIVRRTSVYAIDSLHLPPSVKSTLKS 226
Query: 352 YAMTS---YTTMTMTTSARQHTKKLRFPSAQSTHS 383
YAMT+ Y ++T + +R K P++ S +S
Sbjct: 227 YAMTTSQCYNSLTQNSKSRNRCKT---PTSHSRNS 258
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 144/240 (60%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++L+ + +
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----SPFCSGNDCSSHILQTVAYKTTT 57
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ +L G ++ + W D S + FC
Sbjct: 58 I----LLEGKRVK---LQIW-DTSGQGRFC------------------------------ 79
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEVEEHAPG+PKVLVGNRLH
Sbjct: 80 --------TIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVEEHAPGIPKVLVGNRLH 131
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LA+ R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 132 LAYKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 191
>gi|195439282|ref|XP_002067560.1| GK16129 [Drosophila willistoni]
gi|194163645|gb|EDW78546.1| GK16129 [Drosophila willistoni]
Length = 252
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 204/329 (62%), Gaps = 83/329 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EILS L D ++ESPFCS + AYKT
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPTTESPFCSNN-------AYKT 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEVE
Sbjct: 46 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVE 105
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 106 EHAPGIPKVLVGNRLHLAFKRQVAAKQAESYASRNNMSCFEISPLCDFNIRES------- 158
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R AL RNGME +WRSNK
Sbjct: 159 --------------------------FCELARMALHRNGMEHIWRSNK------------ 180
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCR IV RT+VYAI+ LPLP +KS LKSYA+
Sbjct: 181 ---------------------VLSLQELCCRTIVRRTSVYAIDSLPLPTSVKSTLKSYAL 219
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTHS 383
T+ T + + + P++ S +S
Sbjct: 220 TTSQCFNSLTQNSKSRNRCKTPTSSSRNS 248
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 121/240 (50%), Gaps = 61/240 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + Y +L+
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPTTE-----SPFCSNNA---YKTTTILLEGKR 54
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V Q W D S + FC+ Y G + + ++D
Sbjct: 55 VKLQ--------------LW-DTSGQGRFCTIIRSYS------------RGAQGIILVYD 87
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
+ + F D ++W LKEVEEHAPG+PKVLVGNRLH
Sbjct: 88 ITNKWSF------------------DGIDRW--------LKEVEEHAPGIPKVLVGNRLH 121
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 122 LAFKRQVAAKQAESYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 181
>gi|195132368|ref|XP_002010615.1| GI21615 [Drosophila mojavensis]
gi|193907403|gb|EDW06270.1| GI21615 [Drosophila mojavensis]
Length = 262
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 209/335 (62%), Gaps = 85/335 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ +L A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCTSHILQTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVEEHAPG+PKVLVGNRLHLA+ R V + AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVEEHAPGIPKVLVGNRLHLAYKRQVAAKTAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ L LP +KS LKS
Sbjct: 191 ------------------------VLSLQELCCRTIVRRTSVYAIDSLHLPPSVKSTLKS 226
Query: 352 YAMTS---YTTMTMTTSARQHTKKLRFPSAQSTHS 383
YAMT+ Y ++T + +R K P++ S +S
Sbjct: 227 YAMTTSQCYNSLTQNSKSRNRCKT---PTSHSRNS 258
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 143/240 (59%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++L+ + +
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----SPFCSGNDCTSHILQTVAYKTTT 57
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ +L G ++ + W D S + FC
Sbjct: 58 I----LLEGKRVK---LQIW-DTSGQGRFC------------------------------ 79
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEVEEHAPG+PKVLVGNRLH
Sbjct: 80 --------TIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVEEHAPGIPKVLVGNRLH 131
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LA+ R V + AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 132 LAYKRQVAAKTAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 191
>gi|195060441|ref|XP_001995807.1| GH17961 [Drosophila grimshawi]
gi|193896593|gb|EDV95459.1| GH17961 [Drosophila grimshawi]
Length = 262
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/335 (54%), Positives = 210/335 (62%), Gaps = 85/335 (25%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+E+PFCSG+ +L A
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTENPFCSGNDCTSHILQTVA 52
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 53 YKTTTILLEGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 112
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVEEHAPG+PKVLVGNRLHLA+ R V ++AE YA +N M+ FE+SPLCDFNIRES
Sbjct: 113 EVEEHAPGIPKVLVGNRLHLAYKRQVAAKQAETYASRNNMSCFEISPLCDFNIRES---- 168
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F EL+R AL RNGME +WRSNK
Sbjct: 169 -----------------------------FCELARMALHRNGMEHIWRSNK--------- 190
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR IV RT+VYAI+ L LP +KS LKS
Sbjct: 191 ------------------------VLSLQELCCRTIVRRTSVYAIDSLHLPPSVKSTLKS 226
Query: 352 YAMTS---YTTMTMTTSARQHTKKLRFPSAQSTHS 383
YAMT+ Y ++T + +R K P++ S +S
Sbjct: 227 YAMTTTQCYNSLTQNSKSRNRCKT---PTSNSRNS 258
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 144/240 (60%), Gaps = 51/240 (21%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EILS + T P + ++L+ + +
Sbjct: 3 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTE-----NPFCSGNDCTSHILQTVAYKTTT 57
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ +L G ++ + W D S + FC
Sbjct: 58 I----LLEGKRVK---LQIW-DTSGQGRFC------------------------------ 79
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLKEVEEHAPG+PKVLVGNRLH
Sbjct: 80 --------TIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVEEHAPGIPKVLVGNRLH 131
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LA+ R V ++AE YA +N M+ FE+SPLCDFNIRESF EL+R AL RNGME +WRSNKV
Sbjct: 132 LAYKRQVAAKQAETYASRNNMSCFEISPLCDFNIRESFCELARMALHRNGMEHIWRSNKV 191
>gi|383848097|ref|XP_003699688.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Megachile
rotundata]
Length = 279
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/387 (50%), Positives = 220/387 (56%), Gaps = 129/387 (33%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYDYLLKFLLVGDSDVGKQEILSGL DG++ESPFCSGS AYK
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSGLE----------DGAAESPFCSGS-------AYK 56
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG+ LVYDITNKWSFDGIDRWLKEV
Sbjct: 57 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGVFLVYDITNKWSFDGIDRWLKEV 116
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EE ++F R V R+AE YA KN MAFFEVSPLCDFNIRES
Sbjct: 117 EE---------------VSFKRQVGERDAEAYAAKNHMAFFEVSPLCDFNIRES------ 155
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+ELSR AL RNGMERL RSNK
Sbjct: 156 ---------------------------FSELSRMALHRNGMERLLRSNK----------- 177
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQEL CRAIVARTTVY I+QLPLP IKSHLKSYA
Sbjct: 178 ----------------------VLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYA 215
Query: 354 MTSYT--------TMTMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGA 405
+T+ + ++ + S + +KLRF ++ L TPS S + +
Sbjct: 216 ITTISQLRYNGNRSLNPSKSLGSYHRKLRFVGV--GYNGLSTPSSSPGSIT--------- 264
Query: 406 SSASVKVSHSQKSKHSSCVGRNSCVVS 432
+SCVGRNSC +S
Sbjct: 265 ------------DSRTSCVGRNSCTIS 279
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSG 35
+KQYDYLLKFLLVGDSDVGKQEILSG
Sbjct: 14 EKQYDYLLKFLLVGDSDVGKQEILSG 39
>gi|328711088|ref|XP_003244444.1| PREDICTED: ras-related protein Rab-40C-like isoform 2
[Acyrthosiphon pisum]
Length = 274
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 197/324 (60%), Gaps = 102/324 (31%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
QK+YDYLLKFLLVGDSDVGKQE+L+ L DGSSESP+CSGS AYK
Sbjct: 11 QKEYDYLLKFLLVGDSDVGKQEMLNDLE----------DGSSESPYCSGS-------AYK 53
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TT ILLDGKRVKLQLWD SGQGR CTIIRSYSRGAQG+LLVYDITNKWSFDG+DRWLKEV
Sbjct: 54 TTIILLDGKRVKLQLWDASGQGRLCTIIRSYSRGAQGVLLVYDITNKWSFDGLDRWLKEV 113
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EE R V+ +EAE YA K+ M FEVSPLCDFNIRES
Sbjct: 114 EE-------------------RQVSVKEAESYASKHHMTLFEVSPLCDFNIRES------ 148
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
F+EL+RRAL RNGMERL RSNK
Sbjct: 149 ---------------------------FSELARRALHRNGMERLLRSNK----------- 170
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQELCCRAIVARTT Y INQLPLP IKSHLKSYA
Sbjct: 171 ----------------------VLSLQELCCRAIVARTTQYGINQLPLPVTIKSHLKSYA 208
Query: 354 MTSYTTMTMTTSARQHTKKLRFPS 377
+TS++T++M+ +KK++ PS
Sbjct: 209 LTSFSTLSMSLPRNSASKKIKLPS 232
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 145/241 (60%), Gaps = 80/241 (33%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDS 69
QK+YDYLLKFLLVGDSDVGKQE+L+ D
Sbjct: 11 QKEYDYLLKFLLVGDSDVGKQEMLN---------------------------------DL 37
Query: 70 DVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+ G E SP+CSGS AYKTT ILLDGKRVKLQLW
Sbjct: 38 EDGSSE---------------------SPYCSGS-------AYKTTIILLDGKRVKLQLW 69
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D SGQGR CTIIRSYSRGAQG+LLVYDITNKWSFDG+DRWLKEVEE
Sbjct: 70 DASGQGRLCTIIRSYSRGAQGVLLVYDITNKWSFDGLDRWLKEVEE-------------- 115
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
R V+ +EAE YA K+ M FEVSPLCDFNIRESF+EL+RRAL RNGMERL RSNK
Sbjct: 116 -----RQVSVKEAESYASKHHMTLFEVSPLCDFNIRESFSELARRALHRNGMERLLRSNK 170
Query: 250 V 250
V
Sbjct: 171 V 171
>gi|291242668|ref|XP_002741230.1| PREDICTED: Rab40c, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 267
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/299 (54%), Positives = 193/299 (64%), Gaps = 80/299 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDY+LKFL+VGDSDVGK EILSGL DG ++SP+ G+Y + + +KT
Sbjct: 8 KPYDYMLKFLVVGDSDVGKGEILSGLE----------DGVADSPY----GQYTNGIEHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDGK+VKLQLWD SGQGRFCTI RSYSRGAQGILLVYDITNKWSFDGIDRW+KEVE
Sbjct: 54 TTILLDGKKVKLQLWDASGQGRFCTIFRSYSRGAQGILLVYDITNKWSFDGIDRWIKEVE 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T AE YA+KN+M FFEVSPLCDFNI
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTDLAESYAMKNEMDFFEVSPLCDFNI---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ES TELSR+ L+RNGMERLWR +K
Sbjct: 164 -----------------------VESLTELSRKVLKRNGMERLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYA 353
V+SLQ+LCC+AIV T +Y++++LPLP ++S LKS+
Sbjct: 189 ---------------------VLSLQDLCCQAIVKCTCIYSVDKLPLPTQLRSRLKSFG 226
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 143/241 (59%), Gaps = 60/241 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDY+LKFL+VGDSDVGK EILSG +E + QY
Sbjct: 8 KPYDYMLKFLVVGDSDVGKGEILSG---------LEDGVADSPYGQYTN----------- 47
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + + L+ + + L D S + FC+
Sbjct: 48 -GIEHKTTTILLDGKKVKLQLWDASGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQGILLVYDITNKWSFDGIDRW+KEVEEHAPGVPK+LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGILLVYDITNKWSFDGIDRWIKEVEEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V+T AE YA+KN+M FFEVSPLCDFNI ES TELSR+ L+RNGMERLWR +K
Sbjct: 129 HLAFKRQVSTDLAESYAMKNEMDFFEVSPLCDFNIVESLTELSRKVLKRNGMERLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|443687773|gb|ELT90659.1| hypothetical protein CAPTEDRAFT_137281 [Capitella teleta]
Length = 303
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 200/329 (60%), Gaps = 81/329 (24%)
Query: 46 ETKPVVATQ--KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGS 103
E P V+ + K YDYLLKFLLVGDSDVGK+EIL GL DG ++ P C +
Sbjct: 31 EFSPSVSLRSCKSYDYLLKFLLVGDSDVGKEEILGGLE----------DGVADPP-CGYA 79
Query: 104 GKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF 163
G + YKTT ILLDGKRVKLQLWDTSGQGRFCTI RSYSRGAQGILLVYDITNKWSF
Sbjct: 80 G--SSGIFYKTTNILLDGKRVKLQLWDTSGQGRFCTIFRSYSRGAQGILLVYDITNKWSF 137
Query: 164 DGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFN 223
DGI RW+KE++EHAPGVPK+L+GNR HLA+ R V+ AE YA+KN MAFFEVSPLCDFN
Sbjct: 138 DGIHRWIKEIDEHAPGVPKILIGNRCHLAYKREVSESLAETYALKNDMAFFEVSPLCDFN 197
Query: 224 IRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKG 283
+ ES E LSR AL+RNGM R W NK
Sbjct: 198 VTESLAE---------------------------------LSRVALKRNGMSRTWGPNK- 223
Query: 284 KHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPN 343
V++LQELCCR I ++TT+Y I++LPLPN
Sbjct: 224 --------------------------------VLTLQELCCRTIASQTTIYGIDRLPLPN 251
Query: 344 LIKSHLKSYAMTSYTTMTMTTSARQHTKK 372
IK+HLKSY +T+ T M + + + +K
Sbjct: 252 AIKAHLKSYLLTNKTHMRIQSFVHRPGEK 280
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 126/301 (41%), Gaps = 82/301 (27%)
Query: 2 ETKPVVATQ--KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDY 59
E P V+ + K YDYLLKFLLVGDSDVGK+EIL G L + + A Y
Sbjct: 31 EFSPSVSLRSCKSYDYLLKFLLVGDSDVGKEEILGG----LEDGVADPPCGYAGSSGIFY 86
Query: 60 LLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKT 114
+L+ V Q W D S + FC+ G +L Y
Sbjct: 87 KTTNILLDGKRVKLQ--------------LW-DTSGQGRFCTIFRSYSRGAQGILLVYDI 131
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T W G R+ I ++ G IL
Sbjct: 132 T-----------NKWSFDGIHRWIKEIDEHAPGVPKIL---------------------- 158
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+GNR HLA+ R V+ AE YA+KN MAFFEVSPLCDFN+ ES ELSR
Sbjct: 159 ----------IGNRCHLAYKREVSESLAETYALKNDMAFFEVSPLCDFNVTESLAELSRV 208
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRN----GMERLWRSNKGK-HLLTY 289
AL+RNGM R W NKV + EL R + G++RL N K HL +Y
Sbjct: 209 ALKRNGMSRTWGPNKV--------LTLQELCCRTIASQTTIYGIDRLPLPNAIKAHLKSY 260
Query: 290 F 290
Sbjct: 261 L 261
>gi|148226134|ref|NP_001088189.1| uncharacterized protein LOC495014 [Xenopus laevis]
gi|54035216|gb|AAH84101.1| Rab40 protein [Xenopus laevis]
gi|156720195|dbj|BAF76738.1| Rab40 GTPase [Xenopus laevis]
Length = 286
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/308 (53%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----SYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARSYAEKNGMTFFEVSPLCNFNVT--------- 164
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR NK
Sbjct: 165 ------------------------ESFTELSRIVLMRHGMEKMWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 138/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYSY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR NK
Sbjct: 129 HLAFKRQVPTEQARSYAEKNGMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKMWRPNK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|432847967|ref|XP_004066238.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Oryzias
latipes]
Length = 290
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 190/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL + DGS+ESP+ SG + YKT
Sbjct: 13 KSYDYLLKFLLVGDSDVGKGEILDSVQ----------DGSAESPYAYSSG-----IDYKT 57
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDGIDRW++E++
Sbjct: 58 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNSWSFDGIDRWIREID 117
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLA+ R V T +A YA KN M FFEVSPLC+FNI
Sbjct: 118 EHAPGVPKILVGNRLHLAYKRQVPTEQARAYAEKNSMTFFEVSPLCNFNI---------- 167
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 168 -----------------------VESFTELSRIVLMRHGMEKFWRPNR------------ 192
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCR+IV+ T V+ I++LPLP+ IKSHLKS++M
Sbjct: 193 ---------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPHTIKSHLKSFSM 231
Query: 355 TSYTTMTM 362
+ M
Sbjct: 232 ANGMNAVM 239
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 122/240 (50%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL + + A DY +L+
Sbjct: 13 KSYDYLLKFLLVGDSDVGKGEILDSVQDG------SAESPYAYSSGIDYKTTTILLDGRR 66
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V K E+ W D S + FC+ Y G + L ++D
Sbjct: 67 V-KLEL-------------W-DTSGQGRFCTIFRSYS------------RGAQGILLVYD 99
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
I S+S +D ++W ++E++EHAPGVPK+LVGNRLH
Sbjct: 100 ---------ITNSWS---------FDGIDRW--------IREIDEHAPGVPKILVGNRLH 133
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LA+ R V T +A YA KN M FFEVSPLC+FNI ESFTELSR L R+GME+ WR N+V
Sbjct: 134 LAYKRQVPTEQARAYAEKNSMTFFEVSPLCNFNIVESFTELSRIVLMRHGMEKFWRPNRV 193
>gi|301769597|ref|XP_002920209.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Ailuropoda
melanoleuca]
gi|281341554|gb|EFB17138.1| hypothetical protein PANDA_008927 [Ailuropoda melanoleuca]
Length = 281
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYA-----YSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|410903057|ref|XP_003965010.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Takifugu
rubripes]
Length = 279
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 190/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 106/245 (43%), Gaps = 69/245 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL + + A DY +L+
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQDG------SAESPYAYSSGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRVK 125
V K E+ W D S + FC+ G +L Y T
Sbjct: 63 V-KLEL-------------W-DTSGQGRFCTIFRSYSRGAQGILLVYDIT---------- 97
Query: 126 LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLV 185
W G R+ I ++ G IL V
Sbjct: 98 -NRWSFDGIDRWIREIDEHAPGVPRIL--------------------------------V 124
Query: 186 GNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLW 245
GNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME+ W
Sbjct: 125 GNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFW 184
Query: 246 RSNKV 250
R N+V
Sbjct: 185 RPNRV 189
>gi|348510181|ref|XP_003442624.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Oreochromis
niloticus]
Length = 279
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 190/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 120/240 (50%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL + + A DY +L+
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQDG------SAESPYAYSSGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V K E+ W D S + FC+ Y G + L ++D
Sbjct: 63 V-KLEL-------------W-DTSGQGRFCTIFRSYS------------RGAQGILLVYD 95
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
+ + F D ++W ++E++EHAPGVP++LVGNRLH
Sbjct: 96 ITNRWSF------------------DGIDRW--------IREIDEHAPGVPRILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME+ WR N+V
Sbjct: 130 LAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFWRPNRV 189
>gi|94536665|ref|NP_001035438.1| ras-related protein Rab-40C [Danio rerio]
gi|92096570|gb|AAI15348.1| RAB40c, member RAS oncogene family [Danio rerio]
Length = 279
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 190/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 120/240 (50%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL + + A DY +L+
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQDG------SAESPYAYSSGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V K E+ W D S + FC+ Y G + L ++D
Sbjct: 63 V-KLEL-------------W-DTSGQGRFCTIFRSYS------------RGAQGILLVYD 95
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
+ + F D ++W ++E++EHAPGVP++LVGNRLH
Sbjct: 96 ITNRWSF------------------DGIDRW--------IREIDEHAPGVPRILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME+ WR N+V
Sbjct: 130 LAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFWRPNRV 189
>gi|289547658|ref|NP_001166133.1| RAB40C, member RAS oncogene family [Gallus gallus]
gi|224069474|ref|XP_002192486.1| PREDICTED: ras-related protein Rab-40C [Taeniopygia guttata]
Length = 281
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 138/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|126335281|ref|XP_001365349.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Monodelphis
domestica]
gi|395515633|ref|XP_003762005.1| PREDICTED: ras-related protein Rab-40C isoform 1 [Sarcophilus
harrisii]
Length = 281
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARSYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARSYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|281183220|ref|NP_001162295.1| ras-related protein Rab-40C [Papio anubis]
gi|289547660|ref|NP_066991.3| ras-related protein Rab-40C isoform a [Homo sapiens]
gi|289547662|ref|NP_001166134.1| ras-related protein Rab-40C isoform a [Homo sapiens]
gi|289547665|ref|NP_001166135.1| ras-related protein Rab-40C isoform a [Homo sapiens]
gi|289547667|ref|NP_001166136.1| ras-related protein Rab-40C isoform a [Homo sapiens]
gi|297697660|ref|XP_002825965.1| PREDICTED: ras-related protein Rab-40C isoform 1 [Pongo abelii]
gi|297697662|ref|XP_002825966.1| PREDICTED: ras-related protein Rab-40C isoform 2 [Pongo abelii]
gi|297697664|ref|XP_002825967.1| PREDICTED: ras-related protein Rab-40C isoform 3 [Pongo abelii]
gi|332844882|ref|XP_003314936.1| PREDICTED: ras-related protein Rab-40C isoform 2 [Pan troglodytes]
gi|27734457|sp|Q96S21.1|RB40C_HUMAN RecName: Full=Ras-related protein Rab-40C; AltName: Full=Rar-like
protein; AltName: Full=Ras-like protein family member
8C; AltName: Full=SOCS box-containing protein RAR3
gi|14336704|gb|AAK61236.1|AE006464_4 RAR (RAS like GTPase) like [Homo sapiens]
gi|119606197|gb|EAW85791.1| RAB40C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606198|gb|EAW85792.1| RAB40C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606199|gb|EAW85793.1| RAB40C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606200|gb|EAW85794.1| RAB40C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|160904128|gb|ABX52115.1| RAB40C, member RAS oncogene family (predicted) [Papio anubis]
gi|387540530|gb|AFJ70892.1| ras-related protein Rab-40C isoform a [Macaca mulatta]
gi|410217358|gb|JAA05898.1| RAB40C, member RAS oncogene family [Pan troglodytes]
gi|410303348|gb|JAA30274.1| RAB40C, member RAS oncogene family [Pan troglodytes]
gi|410339291|gb|JAA38592.1| RAB40C, member RAS oncogene family [Pan troglodytes]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|390471010|ref|XP_003734412.1| PREDICTED: ras-related protein Rab-40C [Callithrix jacchus]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|21040231|ref|NP_631893.1| ras-related protein Rab-40C [Mus musculus]
gi|32996729|ref|NP_872616.1| ras-related protein Rab-40C [Rattus norvegicus]
gi|27734456|sp|Q8VHQ4.1|RB40C_MOUSE RecName: Full=Ras-related protein Rab-40C; AltName: Full=SOCS
box-containing protein RAR3
gi|18141128|gb|AAL60515.1|AF422144_1 SOCS box containing protein RAR3 [Mus musculus]
gi|20071950|gb|AAH27008.1| Rab40c, member RAS oncogene family [Mus musculus]
gi|30313801|gb|AAO48789.1| GTP-binding protein Rab40c [Rattus norvegicus]
gi|112293047|dbj|BAF02901.1| Rab40C [Mus musculus]
gi|148690526|gb|EDL22473.1| Rab40c, member RAS oncogene family [Mus musculus]
gi|149052165|gb|EDM03982.1| Rab40c, member RAS oncogene family [Rattus norvegicus]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|395835660|ref|XP_003790793.1| PREDICTED: ras-related protein Rab-40C [Otolemur garnettii]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|348585407|ref|XP_003478463.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Cavia
porcellus]
gi|351711208|gb|EHB14127.1| Ras-related protein Rab-40C [Heterocephalus glaber]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|125630721|ref|NP_001075014.1| ras-related protein Rab-40C [Bos taurus]
gi|124829122|gb|AAI33362.1| RAB40C, member RAS oncogene family [Bos taurus]
gi|296473508|tpg|DAA15623.1| TPA: RAB40C, member RAS oncogene family [Bos taurus]
gi|440913456|gb|ELR62906.1| Ras-related protein Rab-40C [Bos grunniens mutus]
Length = 281
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|410918135|ref|XP_003972541.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Takifugu
rubripes]
Length = 286
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 193/317 (60%), Gaps = 85/317 (26%)
Query: 46 ETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGK 105
++ PV K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG
Sbjct: 4 QSSPV----KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG- 48
Query: 106 YDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDG 165
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDG
Sbjct: 49 ----IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDG 104
Query: 166 IDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
IDRW++E++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 105 IDRWIREIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNV- 163
Query: 226 ESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKH 285
ESFTELSR L R+GME+ WR N+
Sbjct: 164 --------------------------------IESFTELSRIVLMRHGMEKFWRPNR--- 188
Query: 286 LLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLI 345
V SLQ+LCCR+IV+ T V+ I++LPLP I
Sbjct: 189 ------------------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPVAI 218
Query: 346 KSHLKSYAMTSYTTMTM 362
KSHLKS++M + M
Sbjct: 219 KSHLKSFSMANGMNAVM 235
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 110/254 (43%), Gaps = 73/254 (28%)
Query: 2 ETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLL 61
++ PV K YDYLLKFLLVGDSDVGK EIL + + A DY
Sbjct: 4 QSSPV----KSYDYLLKFLLVGDSDVGKGEILDSLQDG------SAESPYAYSSGIDYKT 53
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTT 116
+L+ V K E+ W D S + FC+ G +L Y T
Sbjct: 54 TTILLDGRRV-KLEL-------------W-DTSGQGRFCTIFRSYSRGAQGILLVYDIT- 97
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
W G R+ I ++ G IL+
Sbjct: 98 ----------NGWSFDGIDRWIREIDEHAPGVPRILV----------------------- 124
Query: 177 APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
GNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L
Sbjct: 125 ---------GNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVL 175
Query: 237 QRNGMERLWRSNKV 250
R+GME+ WR N+V
Sbjct: 176 MRHGMEKFWRPNRV 189
>gi|47220305|emb|CAG03339.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 189/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCR+IV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 106/245 (43%), Gaps = 69/245 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL + + A DY +L+
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQDG------SAESPYAYSSGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRVK 125
V K E+ W D S + FC+ G +L Y T
Sbjct: 63 V-KLEL-------------W-DTSGQGRFCTIFRSYSRGAQGILLVYDIT---------- 97
Query: 126 LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLV 185
W G R+ I ++ G IL V
Sbjct: 98 -NGWSFDGIDRWIREIDEHAPGVPRIL--------------------------------V 124
Query: 186 GNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLW 245
GNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME+ W
Sbjct: 125 GNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFW 184
Query: 246 RSNKV 250
R N+V
Sbjct: 185 RPNRV 189
>gi|183396450|gb|ACC62125.1| Rab40c, member RAS oncogene family (predicted) [Rhinolophus
ferrumequinum]
Length = 281
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTELSR L R+GME++WR N+
Sbjct: 167 --------------------------FTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|431906748|gb|ELK10869.1| Ras-related protein Rab-40C [Pteropus alecto]
Length = 281
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTELSR L R+GME++WR N+
Sbjct: 167 --------------------------FTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|417409313|gb|JAA51167.1| Putative gtp-binding protein, partial [Desmodus rotundus]
Length = 282
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 10 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYA-----YSNGIDYKT 54
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 55 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 114
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 115 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES------- 167
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTELSR L R+GME++WR N+
Sbjct: 168 --------------------------FTELSRIVLMRHGMEKIWRPNR------------ 189
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 190 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 228
Query: 355 TSYTTMTM 362
+ M
Sbjct: 229 ANGMNAVM 236
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 10 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 47
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 48 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 95
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 96 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 129
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 130 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKIWRPNR 189
Query: 250 V 250
V
Sbjct: 190 V 190
>gi|45708673|gb|AAH28696.1| RAB40C, member RAS oncogene family [Homo sapiens]
Length = 281
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RV+L+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVRLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 137/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R R L D S + FC
Sbjct: 47 NGIDYKTTTILLDGRRVRLELWDTSGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|344292254|ref|XP_003417843.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Loxodonta
africana]
Length = 281
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K +DYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSFDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTELSR L R+GME++WR N+
Sbjct: 167 --------------------------FTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 138/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K +DYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSFDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|380815122|gb|AFE79435.1| ras-related protein Rab-40C isoform a [Macaca mulatta]
Length = 281
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 192/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y + + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y Y
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSF------------------DGIDRW--------IKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|387017938|gb|AFJ51087.1| ras-related protein Rab-40B-like [Crotalus adamanteus]
Length = 278
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/351 (47%), Positives = 209/351 (59%), Gaps = 87/351 (24%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y+ + YKT
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLE----------DGATESPY-----GYNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTEQAQAYAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSM 227
Query: 355 TSYTTMTM------TTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVS 399
+ M + +A + K+ A+ L P P A + +S
Sbjct: 228 ANGLNARMMHGRSYSLTASNNNKRNSLKKAKIIRPLQSPPKPCARNSCKIS 278
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/240 (52%), Positives = 150/240 (62%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YD+LLKFLLVGDSDVGK EIL+ + AT+ Y Y
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLEDG------------ATESPYGY----------- 45
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+ ++ + LDG +R+KLQLWD
Sbjct: 46 --------NMGIDYKTTTILLDG----------------------------RRIKLQLWD 69
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLH
Sbjct: 70 TSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NKV
Sbjct: 130 LAFKRQVSTEQAQAYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKV 189
>gi|124504338|gb|AAI28721.1| Rab40c, member RAS oncogene family [Rattus norvegicus]
Length = 281
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 190/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPMEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 120/241 (49%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPMEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|383420349|gb|AFH33388.1| ras-related protein Rab-40C isoform a [Macaca mulatta]
Length = 281
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 191/308 (62%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 121/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++EHAPGVP++LVGNRL
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 129 HLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|348532775|ref|XP_003453881.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Oreochromis
niloticus]
Length = 288
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 188/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSVESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 164 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCR+IV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 189 ---------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 108/245 (44%), Gaps = 69/245 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL L +E+ A DY +L+
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILD----SLQDGSVESP--YAYSSGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRVK 125
V K E+ W D S + FC+ G +L Y T
Sbjct: 63 V-KLEL-------------W-DTSGQGRFCTIFRSYSRGAQGILLVYDIT---------- 97
Query: 126 LQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLV 185
W G R+ I ++ G IL V
Sbjct: 98 -NGWSFDGIDRWIREIDEHAPGVPRIL--------------------------------V 124
Query: 186 GNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLW 245
GNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME+ W
Sbjct: 125 GNRLHLAFKRQVPTEQARAYAEKNSMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFW 184
Query: 246 RSNKV 250
R N+V
Sbjct: 185 RPNRV 189
>gi|260824291|ref|XP_002607101.1| hypothetical protein BRAFLDRAFT_68105 [Branchiostoma floridae]
gi|229292447|gb|EEN63111.1| hypothetical protein BRAFLDRAFT_68105 [Branchiostoma floridae]
Length = 263
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/333 (51%), Positives = 199/333 (59%), Gaps = 81/333 (24%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ ++ YDYLLKFLLVGDSDVGKQEILSGL DG+++SPF G G +
Sbjct: 5 SPKRDYDYLLKFLLVGDSDVGKQEILSGLD----------DGANDSPFGYGCG-----ID 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDGKRVKLQLWD SGQGRFCTI RSYSRGAQGIL+VYDITNKWSFDGIDRWLK
Sbjct: 50 YKTTTILLDGKRVKLQLWDASGQGRFCTIFRSYSRGAQGILVVYDITNKWSFDGIDRWLK 109
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVEEHAPGVPK+LVGNRLHLAF R V+ AE YA+KN MAFFEVSPLCDFNI ES
Sbjct: 110 EVEEHAPGVPKILVGNRLHLAFKRQVSIPAAEQYAMKNDMAFFEVSPLCDFNITES---- 165
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F ELSR AL+R+G++R + NK
Sbjct: 166 -----------------------------FLELSRIALKRHGIDRFLKCNK--------- 187
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LC R IV T + I +LPLP ++S L+S
Sbjct: 188 ------------------------VLSLQDLCSRVIVQYTHPHHIEKLPLPTSLRSRLRS 223
Query: 352 YAMTSYTTMTMTTSARQHTKKLRFPSAQSTHSL 384
++ TS M + K+ P + S S+
Sbjct: 224 FSNTSMCAHPMPSPYPSKRTKIIRPDSPSHTSV 256
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSG 35
+ ++ YDYLLKFLLVGDSDVGKQEILSG
Sbjct: 5 SPKRDYDYLLKFLLVGDSDVGKQEILSG 32
>gi|225712642|gb|ACO12167.1| Ras-related protein Rab-40C [Lepeophtheirus salmonis]
gi|290561807|gb|ADD38301.1| Ras-related protein Rab-40C [Lepeophtheirus salmonis]
Length = 299
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/309 (54%), Positives = 192/309 (62%), Gaps = 85/309 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPF-CSGSGKYDDML 110
+T K YDYLLK LLVGDSDVGKQEILSGL DG+S+SPF CS S +
Sbjct: 17 STNKGYDYLLKVLLVGDSDVGKQEILSGLQ----------DGASDSPFSCSTSA--NSGA 64
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
AYKTT IL+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GI+RWL
Sbjct: 65 AYKTTMILIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGINRWL 124
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
KEV++HAPG+PKVL+GNRLHLAF R V EAE YA KN M FFEVSP
Sbjct: 125 KEVDDHAPGIPKVLIGNRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSP------------ 172
Query: 231 LSRRALQRNGMERLWRSNKVGRKPLINF---ESFTELSRRALQRNGMERLWRSNKGKHLL 287
L+NF ESF EL+R AL+RNGMERLWR NK
Sbjct: 173 ------------------------LVNFNISESFIELARMALKRNGMERLWRLNK----- 203
Query: 288 TYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKS 347
V SL ELC IV RT+VY I++LPLP ++
Sbjct: 204 ----------------------------VSSLYELCAHTIVNRTSVYGIDKLPLPQSVQQ 235
Query: 348 HLKSYAMTS 356
+LKSYA+++
Sbjct: 236 NLKSYALST 244
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 161/244 (65%), Gaps = 57/244 (23%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+T K YDYLLK LLVGDSDVGKQEILSG L G
Sbjct: 17 STNKGYDYLLKVLLVGDSDVGKQEILSG----------------------------LQDG 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPF-CSGSGKYDDMLAYKTTTILLDGKRVKL 126
SD SPF CS S + AYKTT IL+DGKRVKL
Sbjct: 49 ASD--------------------------SPFSCSTSA--NSGAAYKTTMILIDGKRVKL 80
Query: 127 QLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVG 186
QLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GI+RWLKEV++HAPG+PKVL+G
Sbjct: 81 QLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGINRWLKEVDDHAPGIPKVLIG 140
Query: 187 NRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWR 246
NRLHLAF R V EAE YA KN M FFEVSPL +FNI ESF EL+R AL+RNGMERLWR
Sbjct: 141 NRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSPLVNFNISESFIELARMALKRNGMERLWR 200
Query: 247 SNKV 250
NKV
Sbjct: 201 LNKV 204
>gi|270012858|gb|EFA09306.1| hypothetical protein TcasGA2_TC030618, partial [Tribolium
castaneum]
Length = 224
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/324 (52%), Positives = 195/324 (60%), Gaps = 103/324 (31%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDGKRV+LQLWDTSGQGRFCTIIRSYSRGAQG+LLVYDITN+WSFDG+DRWLK
Sbjct: 1 YKTTTILLDGKRVRLQLWDTSGQGRFCTIIRSYSRGAQGVLLVYDITNRWSFDGLDRWLK 60
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPGVPKVLVGNRLH AF R V R+A+MYA ++ MAFFEVSPLC+FNI ES
Sbjct: 61 EVDEHAPGVPKVLVGNRLHFAFKRKVGERDAQMYANRHSMAFFEVSPLCNFNIHES---- 116
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F ELSR ALQRNGMERLWRSNK
Sbjct: 117 -----------------------------FCELSRMALQRNGMERLWRSNK--------- 138
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCRAIVARTTVY+I QLPLP +KS+LKS
Sbjct: 139 ------------------------VLSLQELCCRAIVARTTVYSIEQLPLPTCVKSYLKS 174
Query: 352 YAMTSYTTMTMTTSARQHT--KKLRFPSAQSTHSLLDTP-SPSAATASLVSCGTGGASSA 408
YA+T+ +T T +++ + +KLRF + TP SP + T
Sbjct: 175 YALTTTSTQLKYTHSQRKSNGRKLRF---------ISTPTSPGSDT-------------- 211
Query: 409 SVKVSHSQKSKHSSCVGRNSCVVS 432
+SCV RNSC +S
Sbjct: 212 -----------RTSCVPRNSCTIS 224
>gi|148224293|ref|NP_001089451.1| uncharacterized protein LOC734501 [Xenopus laevis]
gi|66911190|gb|AAH97548.1| MGC114680 protein [Xenopus laevis]
Length = 278
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 195/306 (63%), Gaps = 81/306 (26%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
V+ K YD+LLKFLLVGDSDVGK EIL+ L DGS+ESP+ Y+ +
Sbjct: 5 VSPVKAYDFLLKFLLVGDSDVGKGEILASLQ----------DGSTESPY-----GYNMGI 49
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
YKTTTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+
Sbjct: 50 DYKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWI 109
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
KE++EHAPGVPK+LVGNRLHLAF R V+T +A+ +A + M FFEVSPLC+FNI ES
Sbjct: 110 KEIDEHAPGVPKILVGNRLHLAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITES--- 166
Query: 231 LSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYF 290
FTEL+R L R+GM+RLWR NK
Sbjct: 167 ------------------------------FTELARIVLMRHGMDRLWRPNK-------- 188
Query: 291 QYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLK
Sbjct: 189 -------------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLK 223
Query: 351 SYAMTS 356
S++M +
Sbjct: 224 SFSMAN 229
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 145/244 (59%), Gaps = 59/244 (24%)
Query: 7 VATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLV 66
V+ K YD+LLKFLLVGDSDVGK EIL+ + +T+ Y Y
Sbjct: 5 VSPVKAYDFLLKFLLVGDSDVGKGEILASLQDG------------STESPYGY------- 45
Query: 67 GDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKL 126
++G + + L+ R + L + SG G++
Sbjct: 46 ---NMGIDYKTTTILLDGRRIKLQLWDT------SGQGRF-------------------- 76
Query: 127 QLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVG 186
CTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVG
Sbjct: 77 -----------CTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVG 125
Query: 187 NRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWR 246
NRLHLAF R V+T +A+ +A + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR
Sbjct: 126 NRLHLAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWR 185
Query: 247 SNKV 250
NKV
Sbjct: 186 PNKV 189
>gi|326930659|ref|XP_003211461.1| PREDICTED: ras-related protein Rab-40B-like [Meleagris gallopavo]
Length = 278
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 164/338 (48%), Positives = 203/338 (60%), Gaps = 95/338 (28%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPY-----GYHMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTEQAQTYAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKK---LRFPSA 378
SY+ + S R KK +R P +
Sbjct: 228 ANGLNARMMHGRSYSLTSSNISKRNSLKKAKIIRLPQS 265
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 139/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y Y
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGY----------H 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+G + + L+ R + L D S + FC
Sbjct: 47 MGIDYKTTTILLDGRRIKLQLWDTSGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NK
Sbjct: 129 HLAFKRQVSTEQAQTYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|147905476|ref|NP_001087313.1| RAB40B, member RAS oncogene family [Xenopus laevis]
gi|51593537|gb|AAH78543.1| MGC85390 protein [Xenopus laevis]
Length = 278
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DGS+ESP+ Y+ + YKT
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQ----------DGSTESPY-----GYNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ +A + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T+ R KK +
Sbjct: 228 ANGLNARMMHGRSYSLTANNTNKRNSLKKAKI 259
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 143/240 (59%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YD+LLKFLLVGDSDVGK EIL+ + +T+ Y Y +
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQDG------------STESPYGY----------N 46
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+G + + L+ R + L + SG G++
Sbjct: 47 MGIDYKTTTILLDGRRIKLQLWDT------SGQGRF------------------------ 76
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
CTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLH
Sbjct: 77 -------CTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V+T +A+ +A + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NKV
Sbjct: 130 LAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKV 189
>gi|348524048|ref|XP_003449535.1| PREDICTED: ras-related protein Rab-40B-like [Oreochromis niloticus]
Length = 285
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/302 (51%), Positives = 194/302 (64%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y+ + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGATESPY-----GYNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLA+ R VTT +A+MYA K + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAYKRQVTTEQAQMYAEKLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GMERLWR +K
Sbjct: 167 --------------------------FTELARIVLMRHGMERLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR+IV+ T V+ +++LPLP +KSHLKS+++
Sbjct: 189 ---------------------VLSLQDLCCRSIVSCTPVHLVDKLPLPLALKSHLKSFSV 227
Query: 355 TS 356
+
Sbjct: 228 AN 229
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 151/240 (62%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + AT+ Y Y + D
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------ATESPYGYNMGI------D 50
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
IL LDG +RVKLQLWD
Sbjct: 51 YKTTTIL-------------LDG----------------------------RRVKLQLWD 69
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLH
Sbjct: 70 TSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LA+ R VTT +A+MYA K + FFEVSPLC+FNI ESFTEL+R L R+GMERLWR +KV
Sbjct: 130 LAYKRQVTTEQAQMYAEKLGVTFFEVSPLCNFNITESFTELARIVLMRHGMERLWRPSKV 189
>gi|327264625|ref|XP_003217113.1| PREDICTED: ras-related protein Rab-40B-like isoform 1 [Anolis
carolinensis]
Length = 279
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 194/307 (63%), Gaps = 81/307 (26%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V + K YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y
Sbjct: 4 VGSPAKAYDFLLKFLLVGDSDVGKGEILASLE----------DGAAESPY-----GYHMG 48
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW
Sbjct: 49 IDYKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRW 108
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 109 IKEIDEHAPGVPKILVGNRLHLAFKRQVSTDQAQAYAERLGMTFFEVSPLCNFNITES-- 166
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
FTEL+R L R+GM+RLWR NK
Sbjct: 167 -------------------------------FTELARIVLMRHGMDRLWRPNK------- 188
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHL
Sbjct: 189 --------------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHL 222
Query: 350 KSYAMTS 356
KS++M +
Sbjct: 223 KSFSMAN 229
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 141/246 (57%), Gaps = 61/246 (24%)
Query: 6 VVATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLL 65
V + K YD+LLKFLLVGDSDVGK EIL+ + A + Y Y
Sbjct: 4 VGSPAKAYDFLLKFLLVGDSDVGKGEILASLEDG------------AAESPYGY------ 45
Query: 66 VGDSDVGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRV 124
+G + + L+ R + L D S + FC
Sbjct: 46 ----HMGIDYKTTTILLDGRRIKLQLWDTSGQGRFC------------------------ 77
Query: 125 KLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVL 184
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+L
Sbjct: 78 --------------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKIL 123
Query: 185 VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERL 244
VGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RL
Sbjct: 124 VGNRLHLAFKRQVSTDQAQAYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRL 183
Query: 245 WRSNKV 250
WR NKV
Sbjct: 184 WRPNKV 189
>gi|49900860|gb|AAH76375.1| Zgc:92926 [Danio rerio]
Length = 279
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 203/343 (59%), Gaps = 96/343 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DGSSESP+ Y+ + YKT
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQ----------DGSSESPY-----GYNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLA+ R VTT + + + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GMERLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMERLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR+IV+ T V+ +++LPLP +KSHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSM 227
Query: 355 T------------SYTTMTMTTSARQHTKKLRF---PSAQSTH 382
SY+ + + R TKK + P + S H
Sbjct: 228 ANGLVNTRMMHGRSYSVIPSSAKKRNGTKKSKIIYPPLSPSQH 270
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 138/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YD+LLKFLLVGDSDVGK EIL+ + +++ Y Y +
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQDG------------SSESPYGY----------N 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+G + + L+ R + L D S + FC
Sbjct: 47 MGIDYKTTTILLDGRRVKLQLWDTSGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLA+ R VTT + + + + FFEVSPLC+FNI ESFTEL+R L R+GMERLWR NK
Sbjct: 129 HLAYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITESFTELARIVLMRHGMERLWRPNK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|349501036|ref|NP_001002524.2| ras-related protein Rab-40B [Danio rerio]
Length = 287
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 203/343 (59%), Gaps = 96/343 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DGSSESP+ Y+ + YKT
Sbjct: 17 KAYDFLLKFLLVGDSDVGKGEILASLQ----------DGSSESPY-----GYNMGIDYKT 61
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 62 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 121
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLA+ R VTT + + + + FFEVSPLC+FNI ES
Sbjct: 122 EHAPGVPKILVGNRLHLAYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITES------- 174
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GMERLWR NK
Sbjct: 175 --------------------------FTELARIVLMRHGMERLWRPNK------------ 196
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR+IV+ T V+ +++LPLP +KSHLKS++M
Sbjct: 197 ---------------------VLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSM 235
Query: 355 T------------SYTTMTMTTSARQHTKKLRF---PSAQSTH 382
SY+ + + R TKK + P + S H
Sbjct: 236 ANGLVNTRMMHGRSYSVIPSSAKKRNGTKKSKIIYPPLSPSQH 278
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 138/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YD+LLKFLLVGDSDVGK EIL+ + +++ Y Y +
Sbjct: 17 KAYDFLLKFLLVGDSDVGKGEILASLQDG------------SSESPYGY----------N 54
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+G + + L+ R + L D S + FC
Sbjct: 55 MGIDYKTTTILLDGRRVKLQLWDTSGQGRFC----------------------------- 85
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 86 ---------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 136
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLA+ R VTT + + + + FFEVSPLC+FNI ESFTEL+R L R+GMERLWR NK
Sbjct: 137 HLAYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITESFTELARIVLMRHGMERLWRPNK 196
Query: 250 V 250
V
Sbjct: 197 V 197
>gi|380789329|gb|AFE66540.1| ras-related protein Rab-40B [Macaca mulatta]
Length = 278
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 259
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|50757677|ref|XP_415603.1| PREDICTED: ras-related protein Rab-40B [Gallus gallus]
Length = 278
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 192/302 (63%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPY-----GYHMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTEQAQTYAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V++LQ+LCCRAIV+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLTLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSM 227
Query: 355 TS 356
+
Sbjct: 228 AN 229
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 139/241 (57%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y Y
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGY----------H 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
+G + + L+ R + L D S + FC
Sbjct: 47 MGIDYKTTTILLDGRRIKLQLWDTSGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NK
Sbjct: 129 HLAFKRQVSTEQAQTYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|427784227|gb|JAA57565.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 304
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/303 (54%), Positives = 188/303 (62%), Gaps = 80/303 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
++ K YDYLLKFLLVGDSDVGK EIL GL DG+ ESPF + G +
Sbjct: 26 SSAKAYDYLLKFLLVGDSDVGKGEILGGLE----------DGALESPFSAPGG----FAS 71
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
Y+TTT+LLDGKRV+L LWDTSGQGRF TIIRSYSRGAQGILLVYDITN+WSFDG+ RWL+
Sbjct: 72 YRTTTVLLDGKRVRLHLWDTSGQGRFSTIIRSYSRGAQGILLVYDITNRWSFDGLGRWLQ 131
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EVE HAPGV KVL+GNRLHLAFNR V +EA YA K+ MAFFEVSPLCDFN+ ES
Sbjct: 132 EVERHAPGVSKVLLGNRLHLAFNREVGRQEAAEYAHKHGMAFFEVSPLCDFNVTES---- 187
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
F ELSR AL+RNGM+ LWRSN+
Sbjct: 188 -----------------------------FVELSRMALRRNGMKHLWRSNR--------- 209
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQELCCR+IV+ T+ + I QLPLP +KS LKS
Sbjct: 210 ------------------------VLSLQELCCRSIVSCTSSHRIEQLPLPTPLKSCLKS 245
Query: 352 YAM 354
Y M
Sbjct: 246 YFM 248
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 158/243 (65%), Gaps = 58/243 (23%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
++ K YDYLLKFLLVGDSDVGK EIL G LE A
Sbjct: 26 SSAKAYDYLLKFLLVGDSDVGKGEILGG--LEDGA------------------------- 58
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
LES F S+ F S Y+TTT+LLDGKRV+L
Sbjct: 59 --------------LESPF-------SAPGGFAS----------YRTTTVLLDGKRVRLH 87
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRF TIIRSYSRGAQGILLVYDITN+WSFDG+ RWL+EVE HAPGV KVL+GN
Sbjct: 88 LWDTSGQGRFSTIIRSYSRGAQGILLVYDITNRWSFDGLGRWLQEVERHAPGVSKVLLGN 147
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAFNR V +EA YA K+ MAFFEVSPLCDFN+ ESF ELSR AL+RNGM+ LWRS
Sbjct: 148 RLHLAFNREVGRQEAAEYAHKHGMAFFEVSPLCDFNVTESFVELSRMALRRNGMKHLWRS 207
Query: 248 NKV 250
N+V
Sbjct: 208 NRV 210
>gi|118403982|ref|NP_001072188.1| RAB40B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|110645714|gb|AAI18722.1| RAB40B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 278
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 192/302 (63%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DG +ESP+ Y+ + YKT
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQ----------DGCTESPY-----GYNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ +A + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSM 227
Query: 355 TS 356
+
Sbjct: 228 AN 229
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 142/240 (59%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YD+LLKFLLVGDSDVGK EIL+ + T+ Y Y +
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQDG------------CTESPYGY----------N 46
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
+G + + L+ R + L + SG G++
Sbjct: 47 MGIDYKTTTILLDGRRIKLQLWDT------SGQGRF------------------------ 76
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
CTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLH
Sbjct: 77 -------CTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V+T +A+ +A + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NKV
Sbjct: 130 LAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKV 189
>gi|449283123|gb|EMC89826.1| Ras-related protein Rab-40B [Columba livia]
Length = 278
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/302 (51%), Positives = 192/302 (63%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG+SESP+ S +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGASESPYGSHTG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWD SGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDASGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVSTEQAQAYAERLGMTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR NK
Sbjct: 167 --------------------------FTELARIVLMRHGMDRLWRPNK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++L LP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLLLPVALRSHLKSFSM 227
Query: 355 TS 356
+
Sbjct: 228 AN 229
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 139/240 (57%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ L+ A ++ + DY +L+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA--SLQDGA----SESPYGSHTGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V Q W D S + FC
Sbjct: 63 VKLQ--------------LW-DASGQGRFC------------------------------ 77
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLH
Sbjct: 78 --------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR NKV
Sbjct: 130 LAFKRQVSTEQAQAYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKV 189
>gi|384941124|gb|AFI34167.1| ras-related protein Rab-40B [Macaca mulatta]
Length = 278
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 200/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 259
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y +
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|321467205|gb|EFX78196.1| hypothetical protein DAPPUDRAFT_5484 [Daphnia pulex]
Length = 227
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 194/310 (62%), Gaps = 91/310 (29%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGKQEIL+ L + +S+ PFC+G +K
Sbjct: 1 KPYDYLLKFLLVGDSDVGKQEILNTLE----------NAASDMPFCAGP-------VHKV 43
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TT+L+DG+RV+LQLWDTSGQGRFCTI+RSYSRGAQG+LLVYD+TNKWSFDGIDRW +EVE
Sbjct: 44 TTLLVDGRRVRLQLWDTSGQGRFCTILRSYSRGAQGLLLVYDLTNKWSFDGIDRWRREVE 103
Query: 175 E--------HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
E HAPGVPKVLVGNRLHL F R V+ +AE YA ++ MAFFE+SPLC++N+
Sbjct: 104 EARLNSPIYHAPGVPKVLVGNRLHLEFKRAVSVAQAEAYAQRHGMAFFEISPLCNYNV-- 161
Query: 227 SFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHL 286
ES EL+RRAL+RNGMERLWR+N+
Sbjct: 162 -------------------------------AESLAELTRRALRRNGMERLWRTNR---- 186
Query: 287 LTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIK 346
V+SLQELCCR+IV++T+VY I++LPLP +
Sbjct: 187 -----------------------------VLSLQELCCRSIVSQTSVYTIDRLPLPPTLH 217
Query: 347 SHLKSYAMTS 356
S L+SYA++S
Sbjct: 218 SQLRSYALSS 227
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 143/249 (57%), Gaps = 71/249 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGKQEIL+ LE A M P A
Sbjct: 1 KPYDYLLKFLLVGDSDVGKQEILN--TLENAASDM---PFCA------------------ 37
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G ++ L ++ R R L D S + FC
Sbjct: 38 -GPVHKVTTLLVDGRRVRLQLWDTSGQGRFC----------------------------- 67
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE--------HAPGVP 181
TI+RSYSRGAQG+LLVYD+TNKWSFDGIDRW +EVEE HAPGVP
Sbjct: 68 ---------TILRSYSRGAQGLLLVYDLTNKWSFDGIDRWRREVEEARLNSPIYHAPGVP 118
Query: 182 KVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGM 241
KVLVGNRLHL F R V+ +AE YA ++ MAFFE+SPLC++N+ ES EL+RRAL+RNGM
Sbjct: 119 KVLVGNRLHLEFKRAVSVAQAEAYAQRHGMAFFEISPLCNYNVAESLAELTRRALRRNGM 178
Query: 242 ERLWRSNKV 250
ERLWR+N+V
Sbjct: 179 ERLWRTNRV 187
>gi|62089002|dbj|BAD92948.1| RAB40B, member RAS oncogene family variant [Homo sapiens]
Length = 380
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 43 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 87
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 88 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 147
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 148 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 200
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 201 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 222
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 223 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 261
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 262 ANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 293
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 43 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 80
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 81 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 128
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 129 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 162
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 163 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 222
Query: 250 V 250
V
Sbjct: 223 V 223
>gi|297702116|ref|XP_002828036.1| PREDICTED: ras-related protein Rab-40B isoform 1 [Pongo abelii]
gi|380809082|gb|AFE76416.1| ras-related protein Rab-40B [Macaca mulatta]
Length = 278
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 259
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|5803163|ref|NP_006813.1| ras-related protein Rab-40B [Homo sapiens]
gi|332849367|ref|XP_511769.3| PREDICTED: ras-related protein Rab-40B isoform 2 [Pan troglodytes]
gi|27734453|sp|Q12829.1|RB40B_HUMAN RecName: Full=Ras-related protein Rab-40B; AltName: Full=SOCS
box-containing protein RAR; Short=Protein Rar
gi|466271|gb|AAA17031.1| Rar protein [Homo sapiens]
gi|119610221|gb|EAW89815.1| RAB40B, member RAS oncogene family [Homo sapiens]
gi|410217662|gb|JAA06050.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410256556|gb|JAA16245.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410292182|gb|JAA24691.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410336303|gb|JAA37098.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410336307|gb|JAA37100.1| RAB40B, member RAS oncogene family [Pan troglodytes]
Length = 278
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 259
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|380809080|gb|AFE76415.1| ras-related protein Rab-40B [Macaca mulatta]
Length = 278
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 201/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 259
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|384941122|gb|AFI34166.1| ras-related protein Rab-40B [Macaca mulatta]
Length = 278
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 200/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 259
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL E+ A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|241117262|ref|XP_002401862.1| RAS-related protein, putative [Ixodes scapularis]
gi|215493218|gb|EEC02859.1| RAS-related protein, putative [Ixodes scapularis]
Length = 296
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 159/304 (52%), Positives = 185/304 (60%), Gaps = 80/304 (26%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
T K YDYLLKFLLVGDSDVGK EIL G DG+ ESPF + G +Y
Sbjct: 21 TAKTYDYLLKFLLVGDSDVGKGEILGGFE----------DGALESPFSAPGG----FASY 66
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
+TTT+LLDGKR++L LWDTSGQGRF TIIRSYSRGAQGI+LVYDITN+WSFDG+ RWL+E
Sbjct: 67 RTTTVLLDGKRIRLHLWDTSGQGRFSTIIRSYSRGAQGIILVYDITNRWSFDGLGRWLQE 126
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
VE+HAPG+ K+L+GNRLHLAF R V EA YA K+ MAFFEVSPLCDFN+ ES
Sbjct: 127 VEKHAPGISKILMGNRLHLAFRREVGQHEAAEYAHKHGMAFFEVSPLCDFNVTES----- 181
Query: 233 RRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQY 292
F ELSR AL+RNGM+ LW++N+
Sbjct: 182 ----------------------------FVELSRMALRRNGMKHLWKANR---------- 203
Query: 293 CFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSY 352
V+SLQELCCR IV T+ Y I QLPLP +KS LKSY
Sbjct: 204 -----------------------VLSLQELCCRTIVGCTSAYRIEQLPLPGPLKSCLKSY 240
Query: 353 AMTS 356
M+S
Sbjct: 241 FMSS 244
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 25/29 (86%)
Query: 9 TQKQYDYLLKFLLVGDSDVGKQEILSGYK 37
T K YDYLLKFLLVGDSDVGK EIL G++
Sbjct: 21 TAKTYDYLLKFLLVGDSDVGKGEILGGFE 49
>gi|344291379|ref|XP_003417413.1| PREDICTED: ras-related protein Rab-40B-like isoform 1 [Loxodonta
africana]
Length = 277
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 197/334 (58%), Gaps = 88/334 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG+ ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGTVESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQARGYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARTVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++ HLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRRHLKSFSM 227
Query: 355 TSYTTMTMT-------TSARQHTKKLRFPSAQST 381
+ M T+ H + LR A T
Sbjct: 228 ANGLNARMMHGGSYSLTAGSSHRRSLRKAKASRT 261
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 120/240 (50%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ L +E+ DY +L+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA----SLQDGTVESP--YGHPAGIDYKTTTILLDGRR 62
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V Q W D S + FC+ Y G + + ++D
Sbjct: 63 VKLQ--------------LW-DTSGQGRFCTIFRSYS------------RGAQGVILVYD 95
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
+ + F D ++W +KE++EHAPGVPK+LVGNRLH
Sbjct: 96 IANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V T +A YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +KV
Sbjct: 130 LAFKRQVPTEQARGYAERLGVTFFEVSPLCNFNITESFTELARTVLLRHGMDRLWRPSKV 189
>gi|17390073|gb|AAH18039.1| RAB40B, member RAS oncogene family [Homo sapiens]
Length = 278
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 200/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ES + +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESTYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 259
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESTYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|332267721|ref|XP_003282829.1| PREDICTED: ras-related protein Rab-40B-like [Nomascus leucogenys]
Length = 278
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 199/332 (59%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQ ++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQSVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R K++
Sbjct: 228 ANGLNARMMHGLSYSLTTSSTHKRSSLCKVKL 259
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQSVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|395825746|ref|XP_003786082.1| PREDICTED: ras-related protein Rab-40B isoform 1 [Otolemur
garnettii]
Length = 278
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 190/302 (62%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FN+ ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNVTES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARTVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR +V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRVVVSCTPVHLVDKLPLPMALRSHLKSFSM 227
Query: 355 TS 356
S
Sbjct: 228 AS 229
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 122/241 (50%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D N+W +KE++EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGINRW--------IKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FN+ ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNVTESFTELARTVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|156120979|ref|NP_001095636.1| ras-related protein Rab-40B [Bos taurus]
gi|151556081|gb|AAI50038.1| RAB40B protein [Bos taurus]
gi|296476140|tpg|DAA18255.1| TPA: RAB40B, member RAS oncogene family [Bos taurus]
Length = 278
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 190/309 (61%), Gaps = 81/309 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE+
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIN 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FMELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T + +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPAHLLDRLPLPTALRSHLKSFSM 227
Query: 355 TSYTTMTMT 363
+ + M
Sbjct: 228 ATGLSARMA 236
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 120/241 (49%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + + ++
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYS------------RGAQGVILVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F D ++W +KE+ EHAPGVPK+LVGNRL
Sbjct: 95 DIANRWSF------------------DGIDRW--------IKEINEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESF EL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFMELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|354495841|ref|XP_003510037.1| PREDICTED: ras-related protein Rab-40B-like [Cricetulus griseus]
Length = 278
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 191/302 (63%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPVTLRSHLKSFSM 227
Query: 355 TS 356
+
Sbjct: 228 AN 229
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 136/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVPK+LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGVILVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|157819039|ref|NP_001100546.1| ras-related protein Rab-40B [Rattus norvegicus]
gi|149055133|gb|EDM06950.1| Rab40b, member RAS oncogene family (predicted) [Rattus norvegicus]
gi|197245822|gb|AAI68956.1| Rab40b, member RAS oncogene family [Rattus norvegicus]
Length = 279
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/331 (47%), Positives = 200/331 (60%), Gaps = 92/331 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 54
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 55 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 114
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 115 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 167
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 168 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 189
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 190 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPVALRSHLKSFSM 228
Query: 355 T-----------SYTTMTMTTSARQHTKKLR 374
SY+ ++ R +K+R
Sbjct: 229 ANGLNTRMMHGRSYSLTANSSHKRNSFRKVR 259
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 136/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 47
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 48 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 79
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVPK+LVGNRL
Sbjct: 80 ----------IFRSYSRGAQGVILVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRL 129
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 130 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 189
Query: 250 V 250
V
Sbjct: 190 V 190
>gi|339522127|gb|AEJ84228.1| Ras-related protein Rab-40C [Capra hircus]
Length = 281
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 184/308 (59%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLK LLVGDSDVGK EIL L G +ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKLLLVGDSDVGKGEILESLQ----------GGPAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R KL+LWDTSGQGRFCTI RSYSRGAQ ILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRFKLELWDTSGQGRFCTIFRSYSRGAQAILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHL F R V T +A YA +N M FFEVSPLC+FN+
Sbjct: 114 EHAPGVPRILVGNRLHLPFKRQVPTEQARAYAERNCMTFFEVSPLCNFNV---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
E+FTELSR L R+GME++WR N+
Sbjct: 164 -----------------------VEAFTELSRIVLMRHGMEKIWRPNR------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ LCCRAIV+ T V+ I++LPLP IKSHLKS+++
Sbjct: 189 ---------------------VFSLQALCCRAIVSCTPVHLIDKLPLPFTIKSHLKSFSV 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGMNAVM 235
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/240 (55%), Positives = 153/240 (63%), Gaps = 59/240 (24%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLK LLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKLLLVGDSDVGKGEIL------------------------------------- 31
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
E L G G +ESP+ Y + + YKTTTILLDG+R KL+LWD
Sbjct: 32 ----ESLQG-------------GPAESPY-----AYSNGIDYKTTTILLDGRRFKLELWD 69
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TSGQGRFCTI RSYSRGAQ ILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRLH
Sbjct: 70 TSGQGRFCTIFRSYSRGAQAILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLH 129
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
L F R V T +A YA +N M FFEVSPLC+FN+ E+FTELSR L R+GME++WR N+V
Sbjct: 130 LPFKRQVPTEQARAYAERNCMTFFEVSPLCNFNVVEAFTELSRIVLMRHGMEKIWRPNRV 189
>gi|27734455|sp|Q8VHP8.1|RB40B_MOUSE RecName: Full=Ras-related protein Rab-40B; AltName: Full=SOCS
box-containing protein RAR
gi|18141139|gb|AAL60520.1|AF425643_1 RAR SOCS box containing protein [Mus musculus]
gi|66794627|gb|AAH96601.1| Rab40b, member RAS oncogene family [Mus musculus]
gi|112293045|dbj|BAF02900.1| Rab40B [Mus musculus]
Length = 278
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 190/302 (62%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCRA+V+ T + +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQELCCRAVVSCTPGHLVDKLPLPVALRSHLKSFSM 227
Query: 355 TS 356
S
Sbjct: 228 AS 229
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 136/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVPK+LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|253970492|ref|NP_631886.2| ras-related protein Rab-40B [Mus musculus]
gi|148702891|gb|EDL34838.1| Rab40b, member RAS oncogene family [Mus musculus]
Length = 279
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 190/302 (62%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 54
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 55 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEID 114
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 115 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 167
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 168 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 189
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQELCCRA+V+ T + +++LPLP ++SHLKS++M
Sbjct: 190 ---------------------VLSLQELCCRAVVSCTPGHLVDKLPLPVALRSHLKSFSM 228
Query: 355 TS 356
S
Sbjct: 229 AS 230
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 136/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 47
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 48 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 79
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVPK+LVGNRL
Sbjct: 80 ----------IFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRL 129
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 130 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 189
Query: 250 V 250
V
Sbjct: 190 V 190
>gi|410256550|gb|JAA16242.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410256552|gb|JAA16243.1| RAB40B, member RAS oncogene family [Pan troglodytes]
gi|410336305|gb|JAA37099.1| RAB40B, member RAS oncogene family [Pan troglodytes]
Length = 278
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 200/332 (60%), Gaps = 92/332 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 228 ANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 259
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 106/246 (43%), Gaps = 71/246 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRV 124
G + + L+ R + L D S + FC+ G +L Y
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIA--------- 97
Query: 125 KLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVL 184
W G R+ I ++ G IL
Sbjct: 98 --NRWSFEGMDRWIKKIDEHAPGVPKIL-------------------------------- 123
Query: 185 VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERL 244
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RL
Sbjct: 124 VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRL 183
Query: 245 WRSNKV 250
WR +KV
Sbjct: 184 WRPSKV 189
>gi|348558160|ref|XP_003464886.1| PREDICTED: ras-related protein Rab-40B-like isoform 1 [Cavia
porcellus]
Length = 278
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/331 (47%), Positives = 199/331 (60%), Gaps = 92/331 (27%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPLALRSHLKSFSM 227
Query: 355 T-----------SYTTMTMTTSARQHTKKLR 374
SY+ T T R +K++
Sbjct: 228 ANGLNARMMHGRSYSLTTSTPHKRTSLRKVK 258
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 135/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVP++LVGNRL
Sbjct: 79 ----------IFRSYSRGAQGVILVYDIANRWSFDGINRWIKEIDEHAPGVPRILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQARAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|432119130|gb|ELK38350.1| Ras-related protein Rab-40B [Myotis davidii]
Length = 340
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/308 (48%), Positives = 188/308 (61%), Gaps = 83/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP Y + YKT
Sbjct: 72 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESP-------YGHXIDYKT 114
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI RW+KE++
Sbjct: 115 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIHRWIKEID 174
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFE+SPLC+FN+ ES
Sbjct: 175 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGLTFFEISPLCNFNVTES------- 227
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 228 --------------------------FTELARTVLLRHGMDRLWRPSK------------ 249
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++S LKS++M
Sbjct: 250 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPLALRSRLKSFSM 288
Query: 355 TSYTTMTM 362
+ M
Sbjct: 289 ANGLNARM 296
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 132/240 (55%), Gaps = 61/240 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL A L + DY +L+
Sbjct: 72 RAYDFLLKFLLVGDSDVGKGEIL--------ASLQDGAAESPYGHXIDYKTTTILLDGRR 123
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
V Q W D S + FC
Sbjct: 124 VKLQ--------------LW-DTSGQGRFC------------------------------ 138
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
TI RSYSRGAQG++LVYDI N+WSFDGI RW+KE++EHAPGVPK+LVGNRLH
Sbjct: 139 --------TIFRSYSRGAQGVILVYDIANRWSFDGIHRWIKEIDEHAPGVPKILVGNRLH 190
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V T +A+ YA + + FFE+SPLC+FN+ ESFTEL+R L R+GM+RLWR +KV
Sbjct: 191 LAFKRQVPTEQAQAYAERLGLTFFEISPLCNFNVTESFTELARTVLLRHGMDRLWRPSKV 250
>gi|410256558|gb|JAA16246.1| RAB40A, member RAS oncogene family [Pan troglodytes]
Length = 278
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 199/335 (59%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNITES---- 166
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
FTEL+R L R+GM+RLWR +K
Sbjct: 167 -----------------------------FTELARIVLLRHGMDRLWRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R +K++
Sbjct: 225 FSMANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 259
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 148/243 (60%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKLQ
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------RRVKLQ 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|432867433|ref|XP_004071189.1| PREDICTED: ras-related protein Rab-40C-like [Oryzias latipes]
Length = 234
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/195 (70%), Positives = 155/195 (79%), Gaps = 15/195 (7%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNK 249
L R+GME+ WR N+
Sbjct: 174 VLMRHGMEKFWRPNR 188
>gi|47217974|emb|CAG02257.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 198/368 (53%), Gaps = 98/368 (26%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS----------------GYKLELTAWLMETKPVVATQ 54
K YDYLLKFLLVGDSDVGK EIL G E L ++ + A +
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSEGVNAEGLGTLAMSRNLPAAE 68
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
Q + + + SGL+ + +G + YKT
Sbjct: 69 NQKRQVGRVAFRDWCCHWASIMASGLHGRRNVKKHGAEG----------------IDYKT 112
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 113 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 172
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 173 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 222
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 223 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 247
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 248 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 286
Query: 355 TSYTTMTM 362
+ M
Sbjct: 287 ANGMNAVM 294
>gi|335297205|ref|XP_003357969.1| PREDICTED: ras-related protein Rab-40B-like [Sus scrofa]
Length = 278
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/302 (49%), Positives = 186/302 (61%), Gaps = 81/302 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + Y+T
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYET 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDG+ RW+ EV
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGLGRWITEVN 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+HAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 QHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R GM+RLWR +K
Sbjct: 167 --------------------------FTELARTVLLRPGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++ HLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDRLPLPVALRGHLKSFSM 227
Query: 355 TS 356
S
Sbjct: 228 AS 229
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 112/246 (45%), Gaps = 71/246 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRV 124
G + + L+ R + L D S + FC+ G +L Y
Sbjct: 47 AGIDYETTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIA--------- 97
Query: 125 KLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVL 184
W G GR+ T + ++ PGVPK+L
Sbjct: 98 --NRWSFDGLGRWITEVNQHA--------------------------------PGVPKIL 123
Query: 185 VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERL 244
VGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R GM+RL
Sbjct: 124 VGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARTVLLRPGMDRL 183
Query: 245 WRSNKV 250
WR +KV
Sbjct: 184 WRPSKV 189
>gi|431908615|gb|ELK12207.1| Ras-related protein Rab-40B [Pteropus alecto]
Length = 287
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 193/328 (58%), Gaps = 87/328 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 18 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----VDYKT 62
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLW+ SGQGR CTI RSYSRGAQG++LVYDI N+WSFDGIDRWLKE++
Sbjct: 63 TTILLDGRRVKLQLWEASGQGRLCTIFRSYSRGAQGVVLVYDIANRWSFDGIDRWLKEID 122
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 123 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 175
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
F EL+R L R+GM+ LWR +K
Sbjct: 176 --------------------------FMELARTVLLRHGMDGLWRPSK------------ 197
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP + SHLKS+++
Sbjct: 198 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPVALSSHLKSFSV 236
Query: 355 TSYTTMTMTTSARQHTKKLRFPSAQSTH 382
M H + +A STH
Sbjct: 237 ADGLNARM-----MHGRSFSL-AASSTH 258
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 18 RAYDFLLKFLLVGDSDVGKGEILA 41
>gi|332239961|ref|XP_003269159.1| PREDICTED: ras-related protein Rab-40C isoform 1 [Nomascus
leucogenys]
Length = 280
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 185/308 (60%), Gaps = 82/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWD+SGQ FC++ R +S QGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDSSGQA-FCSLSRVFSSLLQGILLVYDITNRWSFDGIDRWIKEID 112
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 113 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 162
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 163 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 187
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 188 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 226
Query: 355 TSYTTMTM 362
+ M
Sbjct: 227 ANGMNAVM 234
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 132/240 (55%), Gaps = 60/240 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
G + + L+ R + L SS FCS S
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDSSGQAFCSLS--------------------------- 79
Query: 131 TSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLH 190
R +S QGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRLH
Sbjct: 80 -----------RVFSSLLQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLH 128
Query: 191 LAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
LAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+V
Sbjct: 129 LAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRV 188
>gi|432098930|gb|ELK28420.1| Ras-related protein Rab-40C [Myotis davidii]
Length = 285
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 174/254 (68%), Gaps = 30/254 (11%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 15 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 74
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFT
Sbjct: 75 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFT 134
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ELSR L R+GME++WR N+V S +L RA+ S HL+
Sbjct: 135 ELSRIVLMRHGMEKIWRPNRVF--------SLQDLCCRAIV---------SCTPVHLIDK 177
Query: 290 FQY-CFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSH 348
C + PS V SLQ+LCCRAIV+ T ++ I++LPLP IKSH
Sbjct: 178 LPLPCHPSPLIPSP------------YVFSLQDLCCRAIVSCTPLHLIDKLPLPVTIKSH 225
Query: 349 LKSYAMTSYTTMTM 362
LKS++M + M
Sbjct: 226 LKSFSMANGMNAVM 239
>gi|291413671|ref|XP_002723086.1| PREDICTED: RAB40B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 278
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/308 (48%), Positives = 188/308 (61%), Gaps = 81/308 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLV DSDVGK EIL+ L DG++ESP+ + + KT
Sbjct: 9 RAYDFLLKFLLVVDSDVGKGEILASLQ----------DGAAESPY-----GHPVSIDCKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWD SGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDASGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 167 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 227
Query: 355 TSYTTMTM 362
+ M
Sbjct: 228 ANGLNARM 235
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 136/241 (56%), Gaps = 61/241 (25%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLV DSDVGK EIL+ + A + Y + + D
Sbjct: 9 RAYDFLLKFLLVVDSDVGKGEILASLQDG------------AAESPYGHPVSI------D 50
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
IL L+ R + L D S + FC
Sbjct: 51 CKTTTIL----LDGRRVKLQLWDASGQGRFC----------------------------- 77
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
TI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++EHAPGVPK+LVGNRL
Sbjct: 78 ---------TIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRL 128
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 129 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
Query: 250 V 250
V
Sbjct: 189 V 189
>gi|109131690|ref|XP_001087021.1| PREDICTED: RAB40A, member RAS oncogene family [Macaca mulatta]
Length = 278
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 185/303 (61%), Gaps = 81/303 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLRG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M
Sbjct: 164 --------------------------IESFTELARIVLLRHRMN---------------- 181
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
CF RPS V+SLQ+LCCR IV+ T VY +++LPLPN ++SHLKS
Sbjct: 182 -CFG---RPS-------------KVLSLQDLCCRTIVSCTPVYLVDKLPLPNALRSHLKS 224
Query: 352 YAM 354
++M
Sbjct: 225 FSM 227
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 103/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHLR-----G 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
+L G ++ + W D S + FC+ G +L Y
Sbjct: 49 IDYKTTTILLDGQRVKL---KLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G IL
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKIL------------------------------ 123
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M
Sbjct: 124 --VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMN 181
Query: 243 RLWRSNKV 250
R +KV
Sbjct: 182 CFGRPSKV 189
>gi|355757578|gb|EHH61103.1| SOCS box-containing protein RAR2A [Macaca fascicularis]
Length = 278
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 185/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M
Sbjct: 164 --------------------------IESFTELARIVLLRHRMN---------------- 181
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
CF RPS V+SLQ+LCCR IV+ T VY +++LPLPN ++SHLKS
Sbjct: 182 -CFG---RPS-------------KVLSLQDLCCRTIVSCTPVYLVDKLPLPNALRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 102/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEIL------------ESLQDGTAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
D IL L + + W D S + FC+ G +L Y
Sbjct: 48 GIDYKTTTIL--LDGQRVKLKLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G IL
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKIL------------------------------ 123
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M
Sbjct: 124 --VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMN 181
Query: 243 RLWRSNKV 250
R +KV
Sbjct: 182 CFGRPSKV 189
>gi|410256554|gb|JAA16244.1| RAB40A, member RAS oncogene family [Pan troglodytes]
Length = 277
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 185/301 (61%), Gaps = 81/301 (26%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI---------- 163
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTEL+R L R+ M L R +K
Sbjct: 164 -----------------------IESFTELARIVLLRHRMNWLGRPSK------------ 188
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR IV+ T V+ +++LPLP+ ++SHLKS++M
Sbjct: 189 ---------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKSFSM 227
Query: 355 T 355
Sbjct: 228 A 228
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 102/246 (41%), Gaps = 71/246 (28%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCS-----GSGKYDDMLAYKTTTILLDGKRV 124
G + + L+ R + L D S + FC+ G +L Y
Sbjct: 47 AGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIA--------- 97
Query: 125 KLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVL 184
W G R+ I ++ G IL
Sbjct: 98 --NRWSFEGMDRWIKKIDEHAPGVPKIL-------------------------------- 123
Query: 185 VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERL 244
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L
Sbjct: 124 VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWL 183
Query: 245 WRSNKV 250
R +KV
Sbjct: 184 GRPSKV 189
>gi|397474874|ref|XP_003808881.1| PREDICTED: ras-related protein Rab-40C [Pan paniscus]
Length = 276
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 169/271 (62%), Gaps = 71/271 (26%)
Query: 92 DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI 151
DG++ESP+ Y + + YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGI
Sbjct: 31 DGAAESPY-----AYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGI 85
Query: 152 LLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQM 211
LLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M
Sbjct: 86 LLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCM 145
Query: 212 AFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQR 271
FFEVSPLC+FN+ ESFTELSR L R
Sbjct: 146 TFFEVSPLCNFNV---------------------------------IESFTELSRIVLMR 172
Query: 272 NGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVART 331
+GME++WR N+ V SLQ+LCCRAIV+ T
Sbjct: 173 HGMEKIWRPNR---------------------------------VFSLQDLCCRAIVSCT 199
Query: 332 TVYAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
V+ I++LPLP IKSHLKS++M + M
Sbjct: 200 PVHLIDKLPLPVTIKSHLKSFSMANGMNAVM 230
>gi|332267147|ref|XP_003282549.1| PREDICTED: ras-related protein Rab-40A [Nomascus leucogenys]
Length = 277
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 184/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + M FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGMTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLRRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VMSLQDLCCRAIVSCTPVHLVHKLPLPITLRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 144/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGMTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLRRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|426396841|ref|XP_004064637.1| PREDICTED: ras-related protein Rab-40A [Gorilla gorilla gorilla]
Length = 309
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 184/303 (60%), Gaps = 81/303 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 38 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 82
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 83 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 142
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 143 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 195
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 196 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 220
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
VISLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 221 ------------------------VISLQDLCCRAIVSCTPVHLVDKLPLPITLRSHLKS 256
Query: 352 YAM 354
++M
Sbjct: 257 FSM 259
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 144/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 38 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHL------G 79
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 80 GIDYKTTTIL-------------LDG----------------------------QRVKLK 98
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 99 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 158
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 159 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRP 218
Query: 248 NKV 250
+KV
Sbjct: 219 SKV 221
>gi|344257105|gb|EGW13209.1| Ras-related protein Rab-40B [Cricetulus griseus]
Length = 208
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 156/195 (80%), Gaps = 15/195 (7%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARI 173
Query: 235 ALQRNGMERLWRSNK 249
L R+GM+RLWR +K
Sbjct: 174 VLLRHGMDRLWRPSK 188
>gi|297710646|ref|XP_002831978.1| PREDICTED: ras-related protein Rab-40A [Pongo abelii]
Length = 277
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 184/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VMSLQDLCCRAIVSCTPVHLVDKLPLPITLRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 144/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|397497758|ref|XP_003819671.1| PREDICTED: ras-related protein Rab-40A [Pan paniscus]
gi|410056801|ref|XP_001137221.3| PREDICTED: ras-related protein Rab-40A isoform 1 [Pan troglodytes]
Length = 277
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 184/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP+ ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 144/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|18141126|gb|AAL60514.1|AF422143_1 SOCS box containing protein RAR2A [Homo sapiens]
Length = 278
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 193/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGD DVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++EEHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP+ ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 143/243 (58%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGD DVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|402910932|ref|XP_003918099.1| PREDICTED: ras-related protein Rab-40A-like [Papio anubis]
Length = 278
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 183/303 (60%), Gaps = 81/303 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG +ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGVAESPYSHLRG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGITFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M
Sbjct: 164 --------------------------IESFTELARIVLLRHRMN---------------- 181
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
CF RPS V+SLQ+LC R IV+ T VY +++LPLPN ++SHLKS
Sbjct: 182 -CFG---RPS-------------KVLSLQDLCSRTIVSCTPVYLVDKLPLPNALRSHLKS 224
Query: 352 YAM 354
++M
Sbjct: 225 FSM 227
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 102/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL L + E+ + + DY +L+
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILE----SLQDGVAESP--YSHLRGIDYKTTTILLD 59
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
V + W D S + FC+ G +L Y
Sbjct: 60 GQRVKL--------------KLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G IL
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKIL------------------------------ 123
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M
Sbjct: 124 --VGNRLHLAFKRQVPREQAQAYAERLGITFFEVSPLCNFNIIESFTELARIVLLRHRMN 181
Query: 243 RLWRSNKV 250
R +KV
Sbjct: 182 CFGRPSKV 189
>gi|296236042|ref|XP_002763156.1| PREDICTED: ras-related protein Rab-40A-like [Callithrix jacchus]
Length = 278
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 185/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ +G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYSHLAG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRAIVSYTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 104/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y + L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYSH-----LAG 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
+L G ++ + W D S + FC+ G +L Y
Sbjct: 49 IDYKTTTILLDGQRVKL---KLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G I
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKI------------------------------- 122
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ +
Sbjct: 123 -LVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLN 181
Query: 243 RLWRSNKV 250
L R +KV
Sbjct: 182 WLGRPSKV 189
>gi|56550077|ref|NP_543155.2| ras-related protein Rab-40A [Homo sapiens]
gi|83287759|sp|Q8WXH6.2|RB40A_HUMAN RecName: Full=Ras-related protein Rab-40A; AltName: Full=SOCS
box-containing protein RAR2A; Short=Protein Rar-2;
Flags: Precursor
gi|18568121|gb|AAL75949.1|AF132748_1 Rar-2 protein [Homo sapiens]
gi|49901805|gb|AAH74854.1| RAB40A, member RAS oncogene family [Homo sapiens]
gi|50960098|gb|AAH74855.1| RAB40A, member RAS oncogene family [Homo sapiens]
gi|109658520|gb|AAI17233.1| RAB40A, member RAS oncogene family [Homo sapiens]
gi|109730501|gb|AAI13502.1| RAB40A, member RAS oncogene family [Homo sapiens]
gi|112293043|dbj|BAF02899.1| Rab40A [Homo sapiens]
gi|119575095|gb|EAW54708.1| RAB40A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|208968711|dbj|BAG74194.1| RAB40A, member RAS oncogene family [synthetic construct]
gi|313882836|gb|ADR82904.1| RAB40A, member RAS oncogene family (RAB40A) [synthetic construct]
Length = 277
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 183/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGD DVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQ----------DGAAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++EEHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP+ ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 143/243 (58%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGD DVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEIL------------ESLQDGAAESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|403307718|ref|XP_003944331.1| PREDICTED: ras-related protein Rab-40A-like [Saimiri boliviensis
boliviensis]
Length = 278
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 185/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ +G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYSHLAG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 104/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y + L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYSH-----LAG 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
+L G ++ + W D S + FC+ G +L Y
Sbjct: 49 IDYKTTTILLDGQRVKL---KLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G I
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKI------------------------------- 122
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ +
Sbjct: 123 -LVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLN 181
Query: 243 RLWRSNKV 250
L R +KV
Sbjct: 182 WLGRPSKV 189
>gi|297710619|ref|XP_002831966.1| PREDICTED: ras-related protein Rab-40A-like [Pongo abelii]
Length = 278
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 194/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L RS+K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRSSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 106/248 (42%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
D IL L + + W D S + FC+ G +L Y
Sbjct: 48 GIDYKTTTIL--LDGQRVKLKLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G IL
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKIL------------------------------ 123
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ +
Sbjct: 124 --VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLN 181
Query: 243 RLWRSNKV 250
L RS+KV
Sbjct: 182 WLGRSSKV 189
>gi|296236063|ref|XP_002763163.1| PREDICTED: ras-related protein Rab-40A-like [Callithrix jacchus]
Length = 278
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 183/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG+ ESP+ Y +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAVESPY-----SYLGGID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLRRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRAIVSYTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 149/243 (61%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y YL
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAVESPYSYL------- 46
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
G D YKTTTILLDG+RVKL+
Sbjct: 47 ------------------------------------GGID----YKTTTILLDGQRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ M L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLRRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|332861268|ref|XP_003317631.1| PREDICTED: ras-related protein Rab-40A-like [Pan troglodytes]
gi|397497742|ref|XP_003819664.1| PREDICTED: ras-related protein Rab-40A-like [Pan paniscus]
Length = 278
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 193/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++EEHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 145/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ + L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|355705023|gb|EHH30948.1| SOCS box-containing protein RAR2A [Macaca mulatta]
Length = 278
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 183/303 (60%), Gaps = 81/303 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEILESLQ----------DGAAESPYSHLRG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTE +R L R+ M
Sbjct: 164 --------------------------IESFTEPARIVLLRHRMN---------------- 181
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
CF RPS V+SLQ+LCCR IV+ T +Y +++LPLPN ++SHLKS
Sbjct: 182 -CFG---RPS-------------KVLSLQDLCCRTIVSCTPLYLVDKLPLPNALRSHLKS 224
Query: 352 YAM 354
+ M
Sbjct: 225 FFM 227
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 102/248 (41%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL E+ A + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKSEIL------------ESLQDGAAESPYSHLR-----G 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
+L G ++ + W D S + FC+ G +L Y
Sbjct: 49 IDYKTTTILLDGQRVKL---KLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIAN------ 98
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G IL
Sbjct: 99 -----RWSFEGMDRWIKKIDEHAPGVPKIL------------------------------ 123
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
VGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTE +R L R+ M
Sbjct: 124 --VGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTEPARIVLLRHRMN 181
Query: 243 RLWRSNKV 250
R +KV
Sbjct: 182 CFGRPSKV 189
>gi|403307701|ref|XP_003944323.1| PREDICTED: ras-related protein Rab-40A-like [Saimiri boliviensis
boliviensis]
Length = 278
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 184/304 (60%), Gaps = 81/304 (26%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ +G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYSHLAG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+ +DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFESMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ M L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRMNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT 355
++M
Sbjct: 225 FSMA 228
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEIL 33
+ + YD+LLKFLLVGDSDVGK EIL
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEIL 31
>gi|332254828|ref|XP_003276535.1| PREDICTED: ras-related protein Rab-40A-like [Nomascus leucogenys]
Length = 278
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 193/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPNQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 145/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 6 SPNQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ + L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|410985617|ref|XP_003999116.1| PREDICTED: ras-related protein Rab-40C [Felis catus]
Length = 403
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 171 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 230
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 231 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV----- 285
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 286 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 310
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 311 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 344
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 345 KSFSMANGMNAVM 357
>gi|310923318|ref|NP_001185633.1| ras-related protein Rab-40A-like [Macaca mulatta]
gi|402910906|ref|XP_003918088.1| PREDICTED: ras-related protein Rab-40A-like [Papio anubis]
Length = 279
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 193/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 7 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 51
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 52 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 111
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 112 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 164
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 165 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 189
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 190 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 225
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 226 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 260
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 145/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 7 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 48
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 49 GIDYKTTTIL-------------LDG----------------------------QRVKLK 67
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K+++EHAPGVPK+LVGN
Sbjct: 68 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIDEHAPGVPKILVGN 127
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ + L R
Sbjct: 128 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLNWLGRP 187
Query: 248 NKV 250
+KV
Sbjct: 188 SKV 190
>gi|355705014|gb|EHH30939.1| Ras-like GTPase [Macaca mulatta]
gi|355757568|gb|EHH61093.1| Ras-like GTPase [Macaca fascicularis]
Length = 278
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 193/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 105/248 (42%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
D IL L + + W D S + FC+ G +L Y
Sbjct: 48 GIDYKTTTIL--LDGQRVKLKLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G I
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKI------------------------------- 122
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ +
Sbjct: 123 -LVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLN 181
Query: 243 RLWRSNKV 250
L R +KV
Sbjct: 182 WLGRPSKV 189
>gi|73611940|ref|NP_001027004.1| ras-related protein Rab-40A-like [Homo sapiens]
gi|83287760|sp|P0C0E4.1|RB40L_HUMAN RecName: Full=Ras-related protein Rab-40A-like; AltName:
Full=Ras-like GTPase
gi|71680466|gb|AAI01172.1| RAB40A, member RAS oncogene family-like [Homo sapiens]
gi|71680889|gb|AAI01170.1| RAB40A, member RAS oncogene family-like [Homo sapiens]
gi|71681931|gb|AAI01173.1| RAB40A, member RAS oncogene family-like [Homo sapiens]
gi|115527304|gb|AAI01171.1| RAB40A, member RAS oncogene family-like [Homo sapiens]
Length = 278
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 192/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGD DVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++EEHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 144/243 (59%), Gaps = 59/243 (24%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGD DVGK EIL + + TA + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDRDVGKSEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
D IL LDG +RVKL+
Sbjct: 48 GIDYKTTTIL-------------LDG----------------------------QRVKLK 66
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEHAPGVPK+LVGN
Sbjct: 67 LWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGN 126
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ + L R
Sbjct: 127 RLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLNWLGRP 186
Query: 248 NKV 250
+KV
Sbjct: 187 SKV 189
>gi|426396797|ref|XP_004064616.1| PREDICTED: ras-related protein Rab-40A-like [Gorilla gorilla
gorilla]
Length = 278
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 192/335 (57%), Gaps = 92/335 (27%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+ + YD+LLKFLLVGDSDVGK EIL L DG++ESP+ G +
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ----------DGTAESPYSHLGG-----ID 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K
Sbjct: 51 YKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIK 110
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++EHAPGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI
Sbjct: 111 KIDEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNI------- 163
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
ESFTEL+R L R+ + L R +K
Sbjct: 164 --------------------------IESFTELARIVLLRHRLNWLGRPSK--------- 188
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCR IV+ V+ +++LPLP ++SHLKS
Sbjct: 189 ------------------------VLSLQDLCCRTIVSCIPVHLVDKLPLPIALRSHLKS 224
Query: 352 YAMT-----------SYTTMTMTTSARQHTKKLRF 375
++M SY+ T +T R K++
Sbjct: 225 FSMAKGLNARMMRGLSYSLTTSSTHKRSSLCKVKI 259
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 105/248 (42%), Gaps = 69/248 (27%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+ + YD+LLKFLLVGDSDVGK EIL + + TA + Y +L G
Sbjct: 6 SPDQAYDFLLKFLLVGDSDVGKGEILESLQ-DGTA-----------ESPYSHL------G 47
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS-----GSGKYDDMLAYKTTTILLDGK 122
D IL L + + W D S + FC+ G +L Y
Sbjct: 48 GIDYKTTTIL--LDGQRVKLKLW-DTSGQGRFCTIFRSYSRGAQGVILVYDIA------- 97
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
W G R+ I ++ G I
Sbjct: 98 ----NRWSFEGMDRWIKKIDEHAPGVPKI------------------------------- 122
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+ +
Sbjct: 123 -LVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLN 181
Query: 243 RLWRSNKV 250
L R +KV
Sbjct: 182 WLGRPSKV 189
>gi|444727258|gb|ELW67759.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
[Tupaia chinensis]
Length = 1708
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/251 (53%), Positives = 158/251 (62%), Gaps = 66/251 (26%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+K
Sbjct: 1479 YKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWMK 1538
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
E++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 1539 EIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES---- 1594
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
FTELSR L R+GME++WR N+
Sbjct: 1595 -----------------------------FTELSRIVLMRHGMEKIWRPNR--------- 1616
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS
Sbjct: 1617 ------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKS 1652
Query: 352 YAMTSYTTMTM 362
++M + M
Sbjct: 1653 FSMANGMNAVM 1663
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 10/51 (19%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGK 105
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G+
Sbjct: 1242 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNGE 1282
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 1242 KSYDYLLKFLLVGDSDVGKGEIL 1264
>gi|326929406|ref|XP_003210856.1| PREDICTED: ras-related protein Rab-40C-like [Meleagris gallopavo]
Length = 306
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/265 (51%), Positives = 162/265 (61%), Gaps = 66/265 (24%)
Query: 98 PFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDI 157
P C + + YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDI
Sbjct: 62 PACLTPVLFSLGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDI 121
Query: 158 TNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVS 217
TN+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVS
Sbjct: 122 TNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVS 181
Query: 218 PLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERL 277
PLC+FN+ ESFTELSR L R+GME++
Sbjct: 182 PLCNFNV---------------------------------IESFTELSRIVLMRHGMEKI 208
Query: 278 WRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAIN 337
WR N+ V SLQ+LCCRAIV+ T V+ I+
Sbjct: 209 WRPNR---------------------------------VFSLQDLCCRAIVSCTPVHLID 235
Query: 338 QLPLPNLIKSHLKSYAMTSYTTMTM 362
+LPLP IKSHLKS++M + M
Sbjct: 236 KLPLPVTIKSHLKSFSMANGMNAVM 260
>gi|194219434|ref|XP_001497076.2| PREDICTED: ras-related protein Rab-40C-like [Equus caballus]
Length = 248
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 16 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 75
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 76 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 130
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 131 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 155
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 156 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 189
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 190 KSFSMANGMNAVM 202
>gi|403273578|ref|XP_003928584.1| PREDICTED: ras-related protein Rab-40C [Saimiri boliviensis
boliviensis]
Length = 248
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 16 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 75
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 76 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 130
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 131 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 155
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 156 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 189
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 190 KSFSMANGMNAVM 202
>gi|345308680|ref|XP_001519794.2| PREDICTED: ras-related protein Rab-40C-like, partial
[Ornithorhynchus anatinus]
Length = 287
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 59 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 118
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 119 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 173
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 174 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 198
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 199 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 232
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 233 KSFSMANGMNAVM 245
>gi|354478727|ref|XP_003501566.1| PREDICTED: ras-related protein Rab-40C-like [Cricetulus griseus]
Length = 341
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 109 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 168
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 169 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 223
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 224 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 248
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 249 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 282
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 283 KSFSMANGMNAVM 295
>gi|355709801|gb|EHH31265.1| SOCS box-containing protein RAR3, partial [Macaca mulatta]
Length = 241
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 9 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 68
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 69 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 123
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 124 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 148
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 149 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 182
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 183 KSFSMANGMNAVM 195
>gi|73959841|ref|XP_854210.1| PREDICTED: ras-related protein Rab-40C [Canis lupus familiaris]
Length = 261
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 29 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 88
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 89 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV----- 143
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 144 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 168
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 169 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 202
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 203 KSFSMANGMNAVM 215
>gi|74227545|dbj|BAE21828.1| unnamed protein product [Mus musculus]
Length = 241
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 138/263 (52%), Positives = 162/263 (61%), Gaps = 70/263 (26%)
Query: 100 CSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITN 159
C+ G D YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN
Sbjct: 3 CACVGGID----YKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITN 58
Query: 160 KWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPL 219
+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPL
Sbjct: 59 RWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPL 118
Query: 220 CDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWR 279
C+FN+ ESFTELSR L R+GME++WR
Sbjct: 119 CNFNV---------------------------------IESFTELSRIVLMRHGMEKIWR 145
Query: 280 SNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQL 339
N+ V SLQ+LCCRAIV+ T V+ I++L
Sbjct: 146 PNR---------------------------------VFSLQDLCCRAIVSCTPVHLIDKL 172
Query: 340 PLPNLIKSHLKSYAMTSYTTMTM 362
PLP IKSHLKS++M + M
Sbjct: 173 PLPVTIKSHLKSFSMANGMNAVM 195
>gi|109127113|ref|XP_001118497.1| PREDICTED: ras-related protein Rab-40C-like [Macaca mulatta]
Length = 248
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 16 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 75
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 76 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNV----- 130
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 131 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 155
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 156 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 189
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 190 KSFSMANGMNAVM 202
>gi|355714949|gb|AES05172.1| RAB40C, member RAS oncoprotein family [Mustela putorius furo]
Length = 237
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 159/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 2 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 61
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 62 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNV----- 116
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTELSR L R+GME++WR N+
Sbjct: 117 ----------------------------IESFTELSRIVLMRHGMEKIWRPNR------- 141
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHL
Sbjct: 142 --------------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHL 175
Query: 350 KSYAMTSYTTMTM 362
KS++M + M
Sbjct: 176 KSFSMANGMNAVM 188
>gi|312374092|gb|EFR21734.1| hypothetical protein AND_16481 [Anopheles darlingi]
Length = 218
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/140 (84%), Positives = 131/140 (93%)
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
A+KTTTILLDGKRVKLQ+WDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDG++RWL
Sbjct: 10 AHKTTTILLDGKRVKLQIWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGLNRWL 69
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
KEVEEHAPGVPKVLVGNRLHLAF R V ++AE+YA +N+MA FE+SPLCDFNIRESF E
Sbjct: 70 KEVEEHAPGVPKVLVGNRLHLAFKRQVAAKQAELYASRNKMACFEISPLCDFNIRESFCE 129
Query: 231 LSRRALQRNGMERLWRSNKV 250
L+R AL RNGMER+WRSNKV
Sbjct: 130 LARMALHRNGMERIWRSNKV 149
>gi|432847969|ref|XP_004066239.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Oryzias
latipes]
Length = 271
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 172/308 (55%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL + DGS+ESP+ SG + YKT
Sbjct: 13 KSYDYLLKFLLVGDSDVGKGEILDSVQ----------DGSAESPYAYSSG-----IDYKT 57
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDGIDRW++E++
Sbjct: 58 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNSWSFDGIDRWIREID 117
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FNI
Sbjct: 118 E-------------------RQVPTEQARAYAEKNSMTFFEVSPLCNFNI---------- 148
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 149 -----------------------VESFTELSRIVLMRHGMEKFWRPNR------------ 173
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCR+IV+ T V+ I++LPLP+ IKSHLKS++M
Sbjct: 174 ---------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPHTIKSHLKSFSM 212
Query: 355 TSYTTMTM 362
+ M
Sbjct: 213 ANGMNAVM 220
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 13 KSYDYLLKFLLVGDSDVGKGEIL 35
>gi|301769599|ref|XP_002920210.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Ailuropoda
melanoleuca]
Length = 262
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYA-----YSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|348510183|ref|XP_003442625.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Oreochromis
niloticus]
Length = 260
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 172/308 (55%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|410903059|ref|XP_003965011.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Takifugu
rubripes]
Length = 260
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 172/308 (55%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNGMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|334333450|ref|XP_003341724.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Monodelphis
domestica]
gi|395515635|ref|XP_003762006.1| PREDICTED: ras-related protein Rab-40C isoform 2 [Sarcophilus
harrisii]
Length = 262
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARSYAEKNCMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 104/241 (43%), Gaps = 80/241 (33%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+ Y G + L ++
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYS------------RGAQGILLVY 94
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
D + + F I R W+KE++E
Sbjct: 95 DITNRWSFDGIDR--------------------------WIKEIDE-------------- 114
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 115 -----RQVPTEQARSYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 169
Query: 250 V 250
V
Sbjct: 170 V 170
>gi|290561547|gb|ADD38174.1| Ras-related protein Rab-40C [Lepeophtheirus salmonis]
Length = 195
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 141/174 (81%), Gaps = 13/174 (7%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPF-CSGSGKYDDML 110
+T K YDYLLK LLVGDSDVGKQEILSGL DG+S+SPF CS S +
Sbjct: 17 STNKGYDYLLKVLLVGDSDVGKQEILSGLQ----------DGASDSPFSCSTSA--NSGA 64
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
AYKTT IL+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GI+RWL
Sbjct: 65 AYKTTMILIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGINRWL 124
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
KEV++HAPG+PKVL+GNRLHLAF R V EAE YA KN M FFEVSPL +FNI
Sbjct: 125 KEVDDHAPGIPKVLIGNRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSPLVNFNI 178
>gi|296219211|ref|XP_002755779.1| PREDICTED: ras-related protein Rab-40C isoform 2 [Callithrix
jacchus]
Length = 262
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|289547669|ref|NP_001166137.1| ras-related protein Rab-40C isoform b [Homo sapiens]
gi|297697666|ref|XP_002825968.1| PREDICTED: ras-related protein Rab-40C isoform 4 [Pongo abelii]
gi|410049705|ref|XP_003952793.1| PREDICTED: ras-related protein Rab-40C [Pan troglodytes]
gi|56181887|gb|AAV83924.1| RAR-like GTPase variant [Homo sapiens]
Length = 262
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|410918137|ref|XP_003972542.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Takifugu
rubripes]
Length = 267
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 175/317 (55%), Gaps = 104/317 (32%)
Query: 46 ETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGK 105
++ PV K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG
Sbjct: 4 QSSPV----KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG- 48
Query: 106 YDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDG 165
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDG
Sbjct: 49 ----IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDG 104
Query: 166 IDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
IDRW++E++E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 105 IDRWIREIDE-------------------RQVPTEQARAYAEKNSMTFFEVSPLCNFNV- 144
Query: 226 ESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKH 285
ESFTELSR L R+GME+ WR N+
Sbjct: 145 --------------------------------IESFTELSRIVLMRHGMEKFWRPNR--- 169
Query: 286 LLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLI 345
V SLQ+LCCR+IV+ T V+ I++LPLP I
Sbjct: 170 ------------------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPVAI 199
Query: 346 KSHLKSYAMTSYTTMTM 362
KSHLKS++M + M
Sbjct: 200 KSHLKSFSMANGMNAVM 216
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 25/32 (78%), Gaps = 4/32 (12%)
Query: 2 ETKPVVATQKQYDYLLKFLLVGDSDVGKQEIL 33
++ PV K YDYLLKFLLVGDSDVGK EIL
Sbjct: 4 QSSPV----KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|348585409|ref|XP_003478464.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Cavia
porcellus]
Length = 262
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNCMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME++WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|344292256|ref|XP_003417844.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Loxodonta
africana]
Length = 262
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 173/308 (56%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K +DYLLKFLLVGDSDVGK EIL L DG+SESP+ Y + + YKT
Sbjct: 9 KSFDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+ ES
Sbjct: 114 E-------------------RQVPTEQARAYAEKNCMTFFEVSPLCNFNVTES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTELSR L R+GME++WR N+
Sbjct: 148 --------------------------FTELSRIVLMRHGMEKIWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 120/241 (49%), Gaps = 80/241 (33%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K +DYLLKFLLVGDSDVGK EIL E+ A++ Y Y
Sbjct: 9 KSFDYLLKFLLVGDSDVGKGEIL------------ESLQDGASESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 NGIDYKTTTILLDGRRVKLELWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++E
Sbjct: 79 ----------IFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-------------- 114
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+
Sbjct: 115 -----RQVPTEQARAYAEKNCMTFFEVSPLCNFNVTESFTELSRIVLMRHGMEKIWRPNR 169
Query: 250 V 250
V
Sbjct: 170 V 170
>gi|402901475|ref|XP_003913674.1| PREDICTED: ras-related protein Rab-40B-like [Papio anubis]
Length = 287
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 168/277 (60%), Gaps = 77/277 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 58 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 117
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI
Sbjct: 118 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----- 172
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTEL+R L R+GM+RLWR +K
Sbjct: 173 ----------------------------TESFTELARIVLLRHGMDRLWRPSK------- 197
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 198 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHL 231
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
KS++M SY+ T +T R +K++
Sbjct: 232 KSFSMANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 268
>gi|410982058|ref|XP_003997379.1| PREDICTED: ras-related protein Rab-40B [Felis catus]
Length = 304
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 168/276 (60%), Gaps = 77/276 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 75 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 134
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 135 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAARLGVTFFEVSPLCNFNITES-- 192
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
FTEL+R L R+GM+RLWR +K
Sbjct: 193 -------------------------------FTELARTVLLRHGMDRLWRPSK------- 214
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V++LQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 215 --------------------------VLTLQDLCCRAVVSCTPVHLVDKLPLPMALRSHL 248
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLR 374
KS++M SY+ T +T R +K++
Sbjct: 249 KSFSMASGLNARMMHGRSYSLTTSSTHKRSSLRKVK 284
>gi|397475180|ref|XP_003846116.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-40B [Pan
paniscus]
Length = 395
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 168/277 (60%), Gaps = 77/277 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 82 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 141
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI
Sbjct: 142 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----- 196
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTEL+R L R+GM+RLWR +K
Sbjct: 197 ----------------------------TESFTELARIVLLRHGMDRLWRPSK------- 221
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 222 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHL 255
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
KS++M SY+ T +T R +K++
Sbjct: 256 KSFSMANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 292
>gi|355754486|gb|EHH58451.1| hypothetical protein EGM_08308, partial [Macaca fascicularis]
Length = 233
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 168/277 (60%), Gaps = 77/277 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 4 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 63
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI
Sbjct: 64 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----- 118
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTEL+R L R+GM+RLWR +K
Sbjct: 119 ----------------------------IESFTELARIVLLRHGMDRLWRPSK------- 143
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 144 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHL 177
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
KS++M SY+ T +T R +K++
Sbjct: 178 KSFSMANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 214
>gi|426346257|ref|XP_004065413.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-40B
[Gorilla gorilla gorilla]
Length = 372
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 168/277 (60%), Gaps = 77/277 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 59 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 118
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI
Sbjct: 119 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI----- 173
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
ESFTEL+R L R+GM+RLWR +K
Sbjct: 174 ----------------------------TESFTELARIVLLRHGMDRLWRPSK------- 198
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 199 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHL 232
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
KS++M SY+ T +T R +K++
Sbjct: 233 KSFSMANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 269
>gi|348532777|ref|XP_003453882.1| PREDICTED: ras-related protein Rab-40C-like isoform 2 [Oreochromis
niloticus]
Length = 269
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 170/308 (55%), Gaps = 100/308 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSVESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA KN M FFEVSPLC+FN+
Sbjct: 114 E-------------------RQVPTEQARAYAEKNSMTFFEVSPLCNFNV---------- 144
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
ESFTELSR L R+GME+ WR N+
Sbjct: 145 -----------------------IESFTELSRIVLMRHGMEKFWRPNR------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V SLQ+LCCR+IV+ T V+ I++LPLP IKSHLKS++M
Sbjct: 170 ---------------------VFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSM 208
Query: 355 TSYTTMTM 362
+ M
Sbjct: 209 ANGMNAVM 216
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|355569056|gb|EHH25337.1| hypothetical protein EGK_09137, partial [Macaca mulatta]
Length = 233
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 168/277 (60%), Gaps = 77/277 (27%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 4 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 63
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 64 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES-- 121
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
FTEL+R L R+GM+RLWR +K
Sbjct: 122 -------------------------------FTELARIVLLRHGMDRLWRPSK------- 143
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 144 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHL 177
Query: 350 KSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
KS++M SY+ T +T R +K++
Sbjct: 178 KSFSMANGLNARMMHGRSYSLTTSSTHKRSSLRKVKL 214
>gi|296203468|ref|XP_002748916.1| PREDICTED: ras-related protein Rab-40B [Callithrix jacchus]
Length = 442
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 168/285 (58%), Gaps = 80/285 (28%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+K
Sbjct: 215 YKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIK 274
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
E++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 275 EIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES---- 330
Query: 232 SRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQ 291
FTEL+R L R+GM+RLWR +K
Sbjct: 331 -----------------------------FTELARIVLLRHGMDRLWRPSK--------- 352
Query: 292 YCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKS 351
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS
Sbjct: 353 ------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPITLRSHLKS 388
Query: 352 YAMT-----------SYTTMTMTTSAR---QHTKKLRFPSAQSTH 382
++M SY+ +T R K +R P + H
Sbjct: 389 FSMANGLNARMMHGRSYSLTASSTHKRSSLHKVKLIRPPQSPPKH 433
>gi|301782125|ref|XP_002926480.1| PREDICTED: ras-related protein Rab-40B-like [Ailuropoda
melanoleuca]
Length = 243
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 129/254 (50%), Positives = 159/254 (62%), Gaps = 66/254 (25%)
Query: 103 SGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWS 162
+GKY + YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WS
Sbjct: 7 NGKYRQGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWS 66
Query: 163 FDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
FDGIDRW+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC F
Sbjct: 67 FDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVPTAQAQAYAERLGVTFFEVSPLCKF 126
Query: 223 NIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNK 282
NI ESF TEL+R L R+G +RLWR +K
Sbjct: 127 NITESF---------------------------------TELARTVLLRHGTDRLWRPSK 153
Query: 283 GKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLP 342
V+SLQ+LCCRA+V+ T V+ +++LPLP
Sbjct: 154 ---------------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLP 180
Query: 343 NLIKSHLKSYAMTS 356
++ HLKS++M S
Sbjct: 181 MALRGHLKSFSMAS 194
>gi|403280727|ref|XP_003945261.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-40B
[Saimiri boliviensis boliviensis]
Length = 352
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 170/294 (57%), Gaps = 77/294 (26%)
Query: 93 GSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIL 152
GSS+ P + YK+TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++
Sbjct: 77 GSSDQPRPGQQTHRPPGIDYKSTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVI 136
Query: 153 LVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMA 212
LVYDI N+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA + +
Sbjct: 137 LVYDIANRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAERLGVT 196
Query: 213 FFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRN 272
FFEVSPLC+FNI ESFTEL+R L R+
Sbjct: 197 FFEVSPLCNFNI---------------------------------TESFTELARIVLLRH 223
Query: 273 GMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTT 332
GM+RLWR +K V+SLQ+LCCRA+V+ T
Sbjct: 224 GMDRLWRPSK---------------------------------VLSLQDLCCRAVVSCTP 250
Query: 333 VYAINQLPLPNLIKSHLKSYAMT-----------SYTTMTMTTSARQHTKKLRF 375
V+ +++LPLP ++SHLKS++M SY+ T T R K++
Sbjct: 251 VHLVDKLPLPIALRSHLKSFSMANGLNARMMHGRSYSLTTSPTHKRSGLHKVKL 304
>gi|194216495|ref|XP_001490311.2| PREDICTED: ras-related protein Rab-40B-like [Equus caballus]
Length = 266
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 180/323 (55%), Gaps = 93/323 (28%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 37 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGIDRW 96
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FN+ ES
Sbjct: 97 IKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNVTES-- 154
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
FTEL+R L R+GM+RLWR +K
Sbjct: 155 -------------------------------FTELARVVLLRHGMDRLWRPSK------- 176
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHL
Sbjct: 177 --------------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPMALRSHL 210
Query: 350 KSYAMTSYTTMTMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGASSAS 409
KS++M + M H + +A STH +S
Sbjct: 211 KSFSMANGLNTRM-----MHGRSYSL-TASSTHKR--------------------SSLRK 244
Query: 410 VKVSHSQKSKHSSCVGRNSCVVS 432
VK S +S C RNSC VS
Sbjct: 245 VKASRPPQSPPKRCT-RNSCKVS 266
>gi|324509640|gb|ADY44048.1| Ras-related protein Rab-40C [Ascaris suum]
Length = 299
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 193/341 (56%), Gaps = 83/341 (24%)
Query: 44 LMETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGS 103
++ + ++ + ++YLLKFLLVGDSDVGK EI L +SESP G+
Sbjct: 1 MVHRREMILCRNDHEYLLKFLLVGDSDVGKNEITDLLG----------PSASESP---GT 47
Query: 104 GKY-DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWS 162
G + + KTTTILL+G+RV+LQLWDTSGQGRF TIIRSYSRGAQGILLVYDITN+WS
Sbjct: 48 GVFVTPGTSSKTTTILLEGRRVRLQLWDTSGQGRFSTIIRSYSRGAQGILLVYDITNRWS 107
Query: 163 FDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
F+GI RWL E++EHAPG+P++L+GNRLHL FNR V+ +EAE++A K M +FE+S L F
Sbjct: 108 FEGIRRWLAEIDEHAPGIPRILIGNRLHLEFNRAVSRQEAELFARKRNMQYFEISTLVYF 167
Query: 223 NIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNK 282
N+ ES TE L+R +QRNGM LWR+N+
Sbjct: 168 NVHESLTE---------------------------------LARLVIQRNGMHWLWRTNQ 194
Query: 283 GKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIV-ARTTVYAINQLPL 341
V +LQ+LCCRA+V V+AI +LPL
Sbjct: 195 ---------------------------------VSTLQDLCCRAVVHCVRNVHAIERLPL 221
Query: 342 PNLIKSHLKSYAMTSYTTMTMTTSARQHTKKLRFPSAQSTH 382
P +K ++S+A + + M + R+HT + F H
Sbjct: 222 PAFLKFKVRSFAQGA--EVCMGSLPRRHTGQHAFSDVTPRH 260
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 156/248 (62%), Gaps = 58/248 (23%)
Query: 4 KPVVATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKF 63
+ ++ + ++YLLKFLLVGDSDVGK EI
Sbjct: 5 REMILCRNDHEYLLKFLLVGDSDVGKNEITD----------------------------- 35
Query: 64 LLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY-DDMLAYKTTTILLDGK 122
L+G S +SESP G+G + + KTTTILL+G+
Sbjct: 36 -LLGPS------------------------ASESP---GTGVFVTPGTSSKTTTILLEGR 67
Query: 123 RVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPK 182
RV+LQLWDTSGQGRF TIIRSYSRGAQGILLVYDITN+WSF+GI RWL E++EHAPG+P+
Sbjct: 68 RVRLQLWDTSGQGRFSTIIRSYSRGAQGILLVYDITNRWSFEGIRRWLAEIDEHAPGIPR 127
Query: 183 VLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGME 242
+L+GNRLHL FNR V+ +EAE++A K M +FE+S L FN+ ES TEL+R +QRNGM
Sbjct: 128 ILIGNRLHLEFNRAVSRQEAELFARKRNMQYFEISTLVYFNVHESLTELARLVIQRNGMH 187
Query: 243 RLWRSNKV 250
LWR+N+V
Sbjct: 188 WLWRTNQV 195
>gi|426380621|ref|XP_004056961.1| PREDICTED: ras-related protein Rab-40C [Gorilla gorilla gorilla]
Length = 302
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 180/329 (54%), Gaps = 102/329 (31%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPY-----AYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLW------------------DTSGQGRFCTIIRSYS---RGAQGILL 153
TTILLDG+RVKL+L G+ F T ++ + + QGILL
Sbjct: 54 TTILLDGRRVKLELCCQNPSSACPGNFHRLMAPGEGGEAAFLTPWKAPTPLLQSCQGILL 113
Query: 154 VYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAF 213
VYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M F
Sbjct: 114 VYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTF 173
Query: 214 FEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNG 273
FEVSPLC+FN+ ESFTELSR L R+G
Sbjct: 174 FEVSPLCNFNV---------------------------------IESFTELSRIVLMRHG 200
Query: 274 MERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTV 333
ME++WR N+ V SLQ+LCCRAIV+ T V
Sbjct: 201 MEKIWRPNR---------------------------------VFSLQDLCCRAIVSCTPV 227
Query: 334 YAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
+ I++LPLP IKSHLKS++M + M
Sbjct: 228 HLIDKLPLPVTIKSHLKSFSMANGMNAVM 256
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 141/243 (58%), Gaps = 44/243 (18%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
K YDYLLKFLLVGDSDVGK EIL E+ A + Y Y
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL------------ESLQDGAAESPYAY----------S 46
Query: 71 VGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWD 130
G + + L+ R R L+ ++P + G + ++A
Sbjct: 47 NGIDYKTTTILLDGR--RVKLELCCQNPSSACPGNFHRLMAP-----------------G 87
Query: 131 TSGQGRFCTIIRSYS---RGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
G+ F T ++ + + QGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGN
Sbjct: 88 EGGEAAFLTPWKAPTPLLQSCQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGN 147
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR
Sbjct: 148 RLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRP 207
Query: 248 NKV 250
N+V
Sbjct: 208 NRV 210
>gi|426239153|ref|XP_004013491.1| PREDICTED: ras-related protein Rab-40B [Ovis aries]
Length = 256
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 163/272 (59%), Gaps = 71/272 (26%)
Query: 91 LDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG 150
L S +P SG + YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG
Sbjct: 13 LQNGSGAPAAHRSG-----IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQG 67
Query: 151 ILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQ 210
++LVYDI N+WSFDGIDRW+KE+ EHAPGVPK+LVGNRLHLAF R V T +A+ YA +
Sbjct: 68 VILVYDIANRWSFDGIDRWIKEINEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLG 127
Query: 211 MAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQ 270
+ FFEVSPLC+FNI ESF EL+R L
Sbjct: 128 VTFFEVSPLCNFNI---------------------------------TESFMELARIVLL 154
Query: 271 RNGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVAR 330
R+GM+RLWR +K V+SLQ+LCCRA+V+
Sbjct: 155 RHGMDRLWRPSK---------------------------------VLSLQDLCCRAVVSC 181
Query: 331 TTVYAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
T + +++LPLP ++SHLKS++M + + M
Sbjct: 182 TPAHLLDRLPLPTALRSHLKSFSMATGLSARM 213
>gi|327264627|ref|XP_003217114.1| PREDICTED: ras-related protein Rab-40B-like isoform 2 [Anolis
carolinensis]
Length = 260
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 176/307 (57%), Gaps = 100/307 (32%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V + K YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ Y
Sbjct: 4 VGSPAKAYDFLLKFLLVGDSDVGKGEILASLE----------DGAAESPY-----GYHMG 48
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW
Sbjct: 49 IDYKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRW 108
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++E R V+T +A+ YA + M FFEVSPLC+FNI ES
Sbjct: 109 IKEIDE-------------------RQVSTDQAQAYAERLGMTFFEVSPLCNFNITES-- 147
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
FTEL+R L R+GM+RLWR NK
Sbjct: 148 -------------------------------FTELARIVLMRHGMDRLWRPNK------- 169
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRAIV+ T V+ +++LPLP ++SHL
Sbjct: 170 --------------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHL 203
Query: 350 KSYAMTS 356
KS++M +
Sbjct: 204 KSFSMAN 210
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 123/246 (50%), Gaps = 80/246 (32%)
Query: 6 VVATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLL 65
V + K YD+LLKFLLVGDSDVGK EIL+ + A + Y Y
Sbjct: 4 VGSPAKAYDFLLKFLLVGDSDVGKGEILASLEDG------------AAESPYGY------ 45
Query: 66 VGDSDVGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRV 124
+G + + L+ R + L D S + FC
Sbjct: 46 ----HMGIDYKTTTILLDGRRIKLQLWDTSGQGRFC------------------------ 77
Query: 125 KLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVL 184
TI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++E
Sbjct: 78 --------------TIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDE--------- 114
Query: 185 VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERL 244
R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GM+RL
Sbjct: 115 ----------RQVSTDQAQAYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRL 164
Query: 245 WRSNKV 250
WR NKV
Sbjct: 165 WRPNKV 170
>gi|440912685|gb|ELR62237.1| Ras-related protein Rab-40B, partial [Bos grunniens mutus]
Length = 231
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 157/253 (62%), Gaps = 66/253 (26%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 2 IDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 61
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE+ EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 62 IKEINEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITES-- 119
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTY 289
F EL+R L R+GM+RLWR +K
Sbjct: 120 -------------------------------FMELARIVLLRHGMDRLWRPSK------- 141
Query: 290 FQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHL 349
V+SLQ+LCCRA+V+ T + +++LPLP ++SHL
Sbjct: 142 --------------------------VLSLQDLCCRAVVSCTPAHLLDRLPLPTALRSHL 175
Query: 350 KSYAMTSYTTMTM 362
KS++M + + M
Sbjct: 176 KSFSMATGLSARM 188
>gi|390335705|ref|XP_785620.3| PREDICTED: ras-related protein Rab-40B-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 184/341 (53%), Gaps = 91/341 (26%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
ME+ P + + YDYLLKFLLVGDSDVGK EI+ L D SE GS
Sbjct: 1 MESPPSSPSARSYDYLLKFLLVGDSDVGKGEIMGRLE----------DSDSEP----GSP 46
Query: 105 KYDDMLA----YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNK 160
Y ++ A +KTTTILLDGKRVKLQLWDTSGQGRFCTI+RSYSRGAQGILL
Sbjct: 47 YYGNIAATGIDHKTTTILLDGKRVKLQLWDTSGQGRFCTILRSYSRGAQGILLXXXXXXX 106
Query: 161 WSF-------DGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAF 213
D I+ + HAPGVPK+LVGNRLHLAF R V+ EA+ YAI+N+MA+
Sbjct: 107 XXXXXXXXXXDTIENNKRSTLNHAPGVPKILVGNRLHLAFKRQVSGEEAQDYAIRNEMAY 166
Query: 214 FEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNG 273
FEVSPLCDFN+ ES T ELSR L+RNG
Sbjct: 167 FEVSPLCDFNVTESLT---------------------------------ELSRLVLKRNG 193
Query: 274 MERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTV 333
MERLWR+NK V+SLQ+ CCR IV T+
Sbjct: 194 MERLWRTNK---------------------------------VLSLQDFCCRTIVNCTST 220
Query: 334 YAINQLPLPNLIKSHLKSYAMTSYTTMTMTTSARQHTKKLR 374
Y+I++LP+P ++S LKS+A ++ M +KK R
Sbjct: 221 YSIDKLPIPMSLRSRLKSFADANHMHRYMLPPLDIRSKKRR 261
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 1 METKPVVATQKQYDYLLKFLLVGDSDVGKQEIL 33
ME+ P + + YDYLLKFLLVGDSDVGK EI+
Sbjct: 1 MESPPSSPSARSYDYLLKFLLVGDSDVGKGEIM 33
>gi|410052369|ref|XP_003953280.1| PREDICTED: ras-related protein Rab-40B isoform 1 [Pan troglodytes]
Length = 259
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 183/332 (55%), Gaps = 111/332 (33%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 E-------------------RQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 148 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 170 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSM 208
Query: 355 T-----------SYTTMTMTTSARQHTKKLRF 375
SY+ T +T R +K++
Sbjct: 209 ANGLNARMMHGGSYSLTTSSTHKRSSLRKVKL 240
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
>gi|344291381|ref|XP_003417414.1| PREDICTED: ras-related protein Rab-40B-like isoform 2 [Loxodonta
africana]
Length = 258
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 179/334 (53%), Gaps = 107/334 (32%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG+ ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGTVESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA + + FFEVSPLC+FNI ES
Sbjct: 114 E-------------------RQVPTEQARGYAERLGVTFFEVSPLCNFNITES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 148 --------------------------FTELARTVLLRHGMDRLWRPSK------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRAIV+ T V+ +++LPLP ++ HLKS++M
Sbjct: 170 ---------------------VLSLQDLCCRAIVSCTPVHLVDKLPLPVALRRHLKSFSM 208
Query: 355 TSYTTMTMT-------TSARQHTKKLRFPSAQST 381
+ M T+ H + LR A T
Sbjct: 209 ANGLNARMMHGGSYSLTAGSSHRRSLRKAKASRT 242
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
>gi|345322399|ref|XP_001510581.2| PREDICTED: ras-related protein Rab-40B-like [Ornithorhynchus
anatinus]
Length = 269
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 137/172 (79%), Gaps = 7/172 (4%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW
Sbjct: 68 IDYKTTTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRW 127
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ESFT
Sbjct: 128 IKEIDEHAPGVPKILVGNRLHLAFKRQVSTEQAQAYAERLGMTFFEVSPLCNFNITESFT 187
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSN 281
EL+R L R+GM+RLWR NK L ES +L NG+E ++++
Sbjct: 188 ELARIVLMRHGMDRLWRPNKATITCLNIGESNCDL-------NGLEEQFQAD 232
>gi|395825748|ref|XP_003786083.1| PREDICTED: ras-related protein Rab-40B isoform 2 [Otolemur
garnettii]
Length = 259
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 172/302 (56%), Gaps = 100/302 (33%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A+ YA + + FFEVSPLC+FN+ ES
Sbjct: 114 E-------------------RQVPTEQAQAYAERLGVTFFEVSPLCNFNVTES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 148 --------------------------FTELARTVLLRHGMDRLWRPSK------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCR +V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 170 ---------------------VLSLQDLCCRVVVSCTPVHLVDKLPLPMALRSHLKSFSM 208
Query: 355 TS 356
S
Sbjct: 209 AS 210
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
>gi|348558162|ref|XP_003464887.1| PREDICTED: ras-related protein Rab-40B-like isoform 2 [Cavia
porcellus]
Length = 259
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 181/331 (54%), Gaps = 111/331 (33%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
E R V T +A YA + + FFEVSPLC+FNI ES
Sbjct: 114 E-------------------RQVPTEQARAYAERLGVTFFEVSPLCNFNITES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R+GM+RLWR +K
Sbjct: 148 --------------------------FTELARIVLLRHGMDRLWRPSK------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M
Sbjct: 170 ---------------------VLSLQDLCCRAVVSCTPVHLVDKLPLPLALRSHLKSFSM 208
Query: 355 T-----------SYTTMTMTTSARQHTKKLR 374
SY+ T T R +K++
Sbjct: 209 ANGLNARMMHGRSYSLTTSTPHKRTSLRKVK 239
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 117/241 (48%), Gaps = 80/241 (33%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSD 70
+ YD+LLKFLLVGDSDVGK EIL+ + A + Y +
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQDG------------AAESPYGH----------P 46
Query: 71 VGKQEILSGLYLESRFPRFWL-DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
G + + L+ R + L D S + FC+
Sbjct: 47 AGIDHKTTTILLDGRRVKLQLWDTSGQGRFCT---------------------------- 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
I RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++E
Sbjct: 79 ----------IFRSYSRGAQGVILVYDIANRWSFDGINRWIKEIDE-------------- 114
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
R V T +A YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 115 -----RQVPTEQARAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSK 169
Query: 250 V 250
V
Sbjct: 170 V 170
>gi|327291001|ref|XP_003230210.1| PREDICTED: ras-related protein Rab-40C-like, partial [Anolis
carolinensis]
Length = 140
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 124/140 (88%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 1 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 60
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFT
Sbjct: 61 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARSYAEKNCMTFFEVSPLCNFNVIESFT 120
Query: 230 ELSRRALQRNGMERLWRSNK 249
ELSR L R+GME++WR N+
Sbjct: 121 ELSRIVLMRHGMEKIWRPNR 140
>gi|449278922|gb|EMC86650.1| Ras-related protein Rab-40C, partial [Columba livia]
Length = 147
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 124/140 (88%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 5 IDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 64
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFT
Sbjct: 65 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFT 124
Query: 230 ELSRRALQRNGMERLWRSNK 249
ELSR L R+GME++WR N+
Sbjct: 125 ELSRIVLMRHGMEKIWRPNR 144
>gi|402590535|gb|EJW84465.1| Ras family protein [Wuchereria bancrofti]
Length = 280
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 177/326 (54%), Gaps = 83/326 (25%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++++Y+LKFLLVGDSDVGK EI F S +P + K
Sbjct: 10 REEHEYMLKFLLVGDSDVGKDEIAD----------FLRPSVSYTP----DALFIPFAVPK 55
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TT ILL+GK V+L+LWD SGQGRF TII+SYSRG QGILLVYDITN+WSFDGI RWL E+
Sbjct: 56 TTVILLEGKFVRLELWDASGQGRFSTIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEI 115
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+EHAPGVPK+L+GNRLHL FNR V REAE +A K M +FE+S L FN+ ES TE
Sbjct: 116 DEHAPGVPKILIGNRLHLEFNRAVPRREAECFARKRNMQYFEISTLAYFNVHESITE--- 172
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
L+R + RNGM RLW+ +
Sbjct: 173 ------------------------------LARLVISRNGMHRLWKCAQ----------- 191
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVAR-TTVYAINQLPLPNLIKSHLKSY 352
V SLQ+LCCRAI+ + V+AI++L LP+ ++ ++S+
Sbjct: 192 ----------------------VASLQDLCCRAIIKNISNVHAIDRLLLPSFLQLKVRSF 229
Query: 353 AMTSYTTMTMTTSARQHTKKLRFPSA 378
A S T + M + R+ F SA
Sbjct: 230 A--SGTDLCMRSVIRRQYATPYFSSA 253
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 141/263 (53%), Gaps = 66/263 (25%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDS 69
+++++Y+LKFLLVGDSDVGK EI +P V+ D L V +
Sbjct: 10 REEHEYMLKFLLVGDSDVGKDEIADF-----------LRPSVSYTP--DALFIPFAVPKT 56
Query: 70 DVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLW 129
V + LE +F R L + SG G+
Sbjct: 57 TV--------ILLEGKFVRLELWDA------SGQGR------------------------ 78
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
F TII+SYSRG QGILLVYDITN+WSFDGI RWL E++EHAPGVPK+L+GNRL
Sbjct: 79 -------FSTIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEIDEHAPGVPKILIGNRL 131
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HL FNR V REAE +A K M +FE+S L FN+ ES TEL+R + RNGM RLW+ +
Sbjct: 132 HLEFNRAVPRREAECFARKRNMQYFEISTLAYFNVHESITELARLVISRNGMHRLWKCAQ 191
Query: 250 VGRKPLINFESFTELSRRALQRN 272
V S +L RA+ +N
Sbjct: 192 VA--------SLQDLCCRAIIKN 206
>gi|311266629|ref|XP_003131174.1| PREDICTED: ras-related protein Rab-40B-like isoform 2 [Sus scrofa]
Length = 259
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 168/302 (55%), Gaps = 100/302 (33%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + Y+T
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYET 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDG+ RW+ EV
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGLGRWITEVN 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+ R V T +A+ YA + + FFEVSPLC+FNI ES
Sbjct: 114 Q-------------------RQVPTEQAQAYAERLGVTFFEVSPLCNFNITES------- 147
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCF 294
FTEL+R L R GM+RLWR +K
Sbjct: 148 --------------------------FTELARTVLLRPGMDRLWRPSK------------ 169
Query: 295 AGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAM 354
V+SLQ+LCCRA+V+ T V+ +++LPLP ++ HLKS++M
Sbjct: 170 ---------------------VLSLQDLCCRAVVSCTPVHLVDRLPLPVALRGHLKSFSM 208
Query: 355 TS 356
S
Sbjct: 209 AS 210
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
>gi|393906720|gb|EFO26094.2| Ras family protein [Loa loa]
Length = 280
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 179/326 (54%), Gaps = 83/326 (25%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++++Y+LKFLLVGDSDVGK EI L G S S + + K
Sbjct: 10 REEHEYMLKFLLVGDSDVGKDEIADLL------------GPSVS--YTPDALFIPFAVPK 55
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILL+GK V+LQLW+ SGQGRF TII+SYSRG QGILLVYDITN+WSFDGI RWL E+
Sbjct: 56 TTTILLEGKFVRLQLWNASGQGRFSTIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEI 115
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+EHAPGVP++L+GNRLHL FNR V EAE +A K M +FE+S L FN+ ES TE
Sbjct: 116 DEHAPGVPRILIGNRLHLEFNRAVPRHEAEYFARKRNMQYFEISTLAYFNVHESITE--- 172
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
L+R + RNGM+ LW+S++
Sbjct: 173 ------------------------------LARLVISRNGMQWLWKSSQ----------- 191
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVAR-TTVYAINQLPLPNLIKSHLKSY 352
V SLQ+LCCRA+V + V+AI++LPLP ++ ++S+
Sbjct: 192 ----------------------VASLQDLCCRAVVKYISNVHAIDRLPLPTFLQLKVRSF 229
Query: 353 AMTSYTTMTMTTSARQHTKKLRFPSA 378
A S + M + R+ F SA
Sbjct: 230 A--SGADLCMHSVIRRQYATPYFSSA 253
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 134/244 (54%), Gaps = 62/244 (25%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEI--LSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVG 67
+++++Y+LKFLLVGDSDVGK EI L G + T D L V
Sbjct: 10 REEHEYMLKFLLVGDSDVGKDEIADLLGPSVSYTP---------------DALFIPFAVP 54
Query: 68 DSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQ 127
+ + + LE +F R L + SG G++
Sbjct: 55 KT--------TTILLEGKFVRLQLWNA------SGQGRFS-------------------- 80
Query: 128 LWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGN 187
TII+SYSRG QGILLVYDITN+WSFDGI RWL E++EHAPGVP++L+GN
Sbjct: 81 -----------TIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEIDEHAPGVPRILIGN 129
Query: 188 RLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRS 247
RLHL FNR V EAE +A K M +FE+S L FN+ ES TEL+R + RNGM+ LW+S
Sbjct: 130 RLHLEFNRAVPRHEAEYFARKRNMQYFEISTLAYFNVHESITELARLVISRNGMQWLWKS 189
Query: 248 NKVG 251
++V
Sbjct: 190 SQVA 193
>gi|170589751|ref|XP_001899637.1| Ras family protein [Brugia malayi]
gi|158593850|gb|EDP32445.1| Ras family protein [Brugia malayi]
Length = 280
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 146/219 (66%), Gaps = 22/219 (10%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++++ +LKFLLVGDSDVGK EI L G S S + + K
Sbjct: 10 REEHECMLKFLLVGDSDVGKDEIADFL------------GPSVSY--TPDALFIPFAVPK 55
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TT ILL+GK V+L+LWD SGQGRF TII+SYSRG QGILLVYDITN+WSFDGI RWL E+
Sbjct: 56 TTVILLEGKFVRLELWDASGQGRFSTIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEI 115
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+EHAPGVPK+L+GNRLHL FNR V REAE +A K M +FE+S L FN+ ES TEL+R
Sbjct: 116 DEHAPGVPKILIGNRLHLEFNRAVPRREAECFARKRNMQYFEISTLAYFNVHESITELAR 175
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRN 272
+ RNGM RLW+ +V S +L RA+ +N
Sbjct: 176 LVISRNGMHRLWKCAQVA--------SLQDLCCRAIIKN 206
>gi|74013289|ref|XP_850363.1| PREDICTED: ras-related protein Rab-40B [Canis lupus familiaris]
Length = 264
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 139/233 (59%), Gaps = 66/233 (28%)
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
DTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 55 DTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 114
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI
Sbjct: 115 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNI------------------------- 149
Query: 250 VGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKY 309
ESFTEL+R L R+GM+RLWR +K
Sbjct: 150 --------TESFTELARTVLLRHGMDRLWRPSK--------------------------- 174
Query: 310 NLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
V+SLQ+LCCRA+V+ T V+ +++LPLP ++ HLKS++M S M
Sbjct: 175 ------VLSLQDLCCRAVVSCTPVHLVDKLPLPMALRGHLKSFSMASGLNARM 221
>gi|312070068|ref|XP_003137975.1| Ras family protein [Loa loa]
Length = 294
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 173/326 (53%), Gaps = 90/326 (27%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++++Y+LKFLLVGDSDVGK EI L G S S + + K
Sbjct: 31 REEHEYMLKFLLVGDSDVGKDEIADLL------------GPSVS--YTPDALFIPFAVPK 76
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TTTILL+GK + SGQGRF TII+SYSRG QGILLVYDITN+WSFDGI RWL E+
Sbjct: 77 TTTILLEGK-------NASGQGRFSTIIKSYSRGVQGILLVYDITNRWSFDGIRRWLAEI 129
Query: 174 EEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+EHAPGVP++L+GNRLHL FNR V EAE +A K M +FE+S L FN+ ES TE
Sbjct: 130 DEHAPGVPRILIGNRLHLEFNRAVPRHEAEYFARKRNMQYFEISTLAYFNVHESITE--- 186
Query: 234 RALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYC 293
L+R + RNGM+ LW+S++
Sbjct: 187 ------------------------------LARLVISRNGMQWLWKSSQ----------- 205
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVAR-TTVYAINQLPLPNLIKSHLKSY 352
V SLQ+LCCRA+V + V+AI++LPLP ++ ++S+
Sbjct: 206 ----------------------VASLQDLCCRAVVKYISNVHAIDRLPLPTFLQLKVRSF 243
Query: 353 AMTSYTTMTMTTSARQHTKKLRFPSA 378
A S + M + R+ F SA
Sbjct: 244 A--SGADLCMHSVIRRQYATPYFSSA 267
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 22/23 (95%)
Query: 10 QKQYDYLLKFLLVGDSDVGKQEI 32
+++++Y+LKFLLVGDSDVGK EI
Sbjct: 31 REEHEYMLKFLLVGDSDVGKDEI 53
>gi|351706453|gb|EHB09372.1| Ras-related protein Rab-40B [Heterocephalus glaber]
Length = 281
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 115/141 (81%), Gaps = 15/141 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNR 195
EHAPGVP++LVGNRLHLAF R
Sbjct: 114 EHAPGVPRILVGNRLHLAFKR 134
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 304 VNKNKYNLLSFS----VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMTSYTT 359
V +N + FS V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLKS++M +
Sbjct: 176 VGRNSSSSAWFSPPSQVLSLQDLCCRAVVSCTPVHLVDKLPLPLALRSHLKSFSMANGLN 235
Query: 360 MTM 362
M
Sbjct: 236 ARM 238
>gi|355767228|gb|EHH62586.1| SOCS box-containing protein RAR3, partial [Macaca fascicularis]
Length = 194
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 122/214 (57%), Gaps = 66/214 (30%)
Query: 149 QGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIK 208
QGILLVYDITN+WSFDGIDRW+KE++EHAPGVP++LVGNRLHLAF R V T +A YA K
Sbjct: 1 QGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEK 60
Query: 209 NQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRA 268
N M FFEVSPLC+FN+ ESFTELSR
Sbjct: 61 NCMTFFEVSPLCNFNV---------------------------------IESFTELSRIV 87
Query: 269 LQRNGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIV 328
L R+GME++WR N+ V SLQ+LCCRAIV
Sbjct: 88 LMRHGMEKIWRPNR---------------------------------VFSLQDLCCRAIV 114
Query: 329 ARTTVYAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
+ T V+ I++LPLP IKSHLKS++M + M
Sbjct: 115 SCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVM 148
>gi|391344207|ref|XP_003746394.1| PREDICTED: ras-related protein Rab-40C-like [Metaseiulus
occidentalis]
Length = 357
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 166/339 (48%), Gaps = 113/339 (33%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y + L+FLLVGDSDVGK EIL + R P L E + +KT
Sbjct: 111 YYHSLRFLLVGDSDVGKNEILEK-FQNHRLP---LVNQKE-------------VEFKTAL 153
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
ILLDGK+VKLQLWDTSGQGRF TII+SYSRGA GI+LV+DITN+WSF+ I +WLKEV+E
Sbjct: 154 ILLDGKQVKLQLWDTSGQGRFSTIIQSYSRGADGIILVFDITNRWSFESIGKWLKEVDE- 212
Query: 177 APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
R V A YA K++M++ EVS L D+NI E+
Sbjct: 213 ------------------REVPKNAAAQYAAKHRMSYLEVSSLADYNITET--------- 245
Query: 237 QRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAG 296
F +LSR+ L R + W ++
Sbjct: 246 ------------------------FVDLSRQVLNRIRLHS-WHESR-------------- 266
Query: 297 LVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMTS 356
V+SLQELCCR IV RTT Y+I +LPLP +KS+LKSY++
Sbjct: 267 -------------------VLSLQELCCRTIVQRTTSYSIERLPLPTSVKSNLKSYSLNP 307
Query: 357 YTTMTMTTSARQ--------HTKKLRFPSAQSTHSLLDT 387
Y + + A + H+KK R S S H+LL+T
Sbjct: 308 YLSSVVNCCAHKQHKCCLNLHSKKGRRSS--SPHNLLET 344
>gi|349804127|gb|AEQ17536.1| hypothetical protein [Hymenochirus curtipes]
Length = 127
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 99/113 (87%)
Query: 138 CTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTV 197
CTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++EHAPGVPK+LVGNRLHLAF R V
Sbjct: 1 CTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQV 60
Query: 198 TTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R L R+GMERLWR NKV
Sbjct: 61 STDQAQNYAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMERLWRPNKV 113
>gi|426254943|ref|XP_004023480.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-40C [Ovis
aries]
Length = 223
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 13/137 (9%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ YKTTTILLDG+ WDTSGQGR CTI RSYSRGAQGILLVYDITN+WSFDGIDRW
Sbjct: 20 IDYKTTTILLDGRGGDAVHWDTSGQGRVCTIFRSYSRGAQGILLVYDITNRWSFDGIDRW 79
Query: 170 LKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+KE++EHAPGVP++LVGNRLHLAF R V T +A YA KN M F FT
Sbjct: 80 IKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTF-------------XFT 126
Query: 230 ELSRRALQRNGMERLWR 246
ELSR L R+GME++WR
Sbjct: 127 ELSRIVLMRHGMEKIWR 143
>gi|335310420|ref|XP_003362024.1| PREDICTED: ras-related protein Rab-40C-like, partial [Sus scrofa]
Length = 213
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 122/233 (52%), Gaps = 66/233 (28%)
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
DTSGQGRFCTI RSYSR QGILLVYDITN+WSFDGIDRW+KE++EHAPGVP+
Sbjct: 1 DTSGQGRFCTIFRSYSRSVQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRXXXXXXX 60
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
V T +A YA KN M FFEVSPLC+FN+
Sbjct: 61 XXXXXXQVPTEQARAYAEKNCMTFFEVSPLCNFNV------------------------- 95
Query: 250 VGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKY 309
ESFTELSR L + L+ P
Sbjct: 96 --------IESFTELSRIVL------------------------MSDLLSP--------- 114
Query: 310 NLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMTSYTTMTM 362
+L +V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLKS++M + M
Sbjct: 115 HLPPPAVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVM 167
>gi|281354397|gb|EFB29981.1| hypothetical protein PANDA_016126 [Ailuropoda melanoleuca]
Length = 191
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 118/208 (56%), Gaps = 66/208 (31%)
Query: 149 QGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIK 208
QG++LVYDI N+WSFDGIDRW+KE++EHAPGVPK+LVGNRLHLAF R V T +A+ YA +
Sbjct: 1 QGVILVYDIANRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVPTAQAQAYAER 60
Query: 209 NQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRRA 268
+ FFEVSPLC FNI ESF TEL+R
Sbjct: 61 LGVTFFEVSPLCKFNITESF---------------------------------TELARTV 87
Query: 269 LQRNGMERLWRSNKGKHLLTYFQYCFAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIV 328
L R+G +RLWR +K V+SLQ+LCCRA+V
Sbjct: 88 LLRHGTDRLWRPSK---------------------------------VLSLQDLCCRAVV 114
Query: 329 ARTTVYAINQLPLPNLIKSHLKSYAMTS 356
+ T V+ +++LPLP ++ HLKS++M S
Sbjct: 115 SCTPVHLVDKLPLPMALRGHLKSFSMAS 142
>gi|432098929|gb|ELK28419.1| Ras-related protein Rab-40C [Myotis davidii]
Length = 172
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 96/123 (78%), Gaps = 15/123 (12%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ Y + + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYA-----YSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHA 177
E
Sbjct: 114 EAG 116
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>gi|444727692|gb|ELW68170.1| Ras-related protein Rab-40B [Tupaia chinensis]
Length = 344
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 98/149 (65%), Gaps = 29/149 (19%)
Query: 130 DTSGQGRFCTIIRSYSR-------------GA----------------QGILLVYDITNK 160
D SGQGRFCTI SYSR GA G++LVYDI N+
Sbjct: 172 DMSGQGRFCTIFSSYSRERTGNSRAGAAPPGALLGQSERSRLLQKSARSGVILVYDIANR 231
Query: 161 WSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLC 220
WSFDGI +W+KE++EHAPGVP++LVGNRLHLAF R +A+ YA + + FFEVSPLC
Sbjct: 232 WSFDGIAQWIKEIDEHAPGVPRILVGNRLHLAFKRQGPREQAQAYAERLGVTFFEVSPLC 291
Query: 221 DFNIRESFTELSRRALQRNGMERLWRSNK 249
+FN+RESFTEL+R L R+G++RLWR K
Sbjct: 292 NFNVRESFTELARIVLLRHGVDRLWRPRK 320
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 10/44 (22%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESP 98
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP
Sbjct: 9 QAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESP 42
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 QAYDFLLKFLLVGDSDVGKGEILA 32
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 113/189 (59%), Gaps = 16/189 (8%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
T +A QK YDYL K LL+GDS VGK +L RF + S F S G
Sbjct: 9 TPTSIAAQKAYDYLFKLLLIGDSGVGKTCLLF------RFA----ENSFNPTFISTIG-- 56
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+ +K T+ +DGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T+K +F+ I
Sbjct: 57 ---IDFKIQTVEIDGKRIKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENI 113
Query: 167 DRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
WLK +EEHA GV ++LV N+ R ++ + ++ A+ + + F E S + N+R
Sbjct: 114 TNWLKNIEEHAAEGVEQLLVANKCDQEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVR 173
Query: 226 ESFTELSRR 234
E+F ++RR
Sbjct: 174 EAFYRMARR 182
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 3 TKPVVATQKQYDYLLKFLLVGDSDVGKQEIL 33
T +A QK YDYL K LL+GDS VGK +L
Sbjct: 9 TPTSIAAQKAYDYLFKLLLIGDSGVGKTCLL 39
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I +W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + RTVT E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASADVEKMILGNKCDMEDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLAR 167
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + N+ E+F L+R
Sbjct: 108 EHASSDVDRMIIGNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLAR 167
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFHTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTIELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAKWLRYI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R ++ + E A + ++F E S + NI E+FT+L+
Sbjct: 108 DEHANEDVEKMILGNKCDMELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLA 167
Query: 233 RRALQR 238
LQ+
Sbjct: 168 EAILQK 173
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 115/198 (58%), Gaps = 17/198 (8%)
Query: 43 WLMET-KPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS 101
WL+ T K V+ +KQYD L K LL+GDS VGK IL RF D + + F S
Sbjct: 14 WLVMTLKVVIMAKKQYDLLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFIS 63
Query: 102 GSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKW 161
G + +K TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN
Sbjct: 64 TIG-----IDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAK 118
Query: 162 SFDGIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLC 220
SFD I +WL+ ++EHA V K+L+GN+ +A R V+ E A + + F E S
Sbjct: 119 SFDNIAKWLRNIDEHASEDVEKMLLGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKA 178
Query: 221 DFNIRESFTELSRRALQR 238
+ I ++F +L+ L +
Sbjct: 179 NIQIDKAFYDLAEAILDK 196
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 1 METKPVVATQKQYDYLLKFLLVGDSDVGKQEIL 33
M K V+ +KQYD L K LL+GDS VGK IL
Sbjct: 17 MTLKVVIMAKKQYDLLFKLLLIGDSGVGKTCIL 49
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L LYL++ F+L F +G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLE-LYLKTLSMSFFL-------FLAG-------IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 110/193 (56%), Gaps = 23/193 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + N+ E+F L+R
Sbjct: 108 EHASSDVDRMIIGNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLAR 167
Query: 234 -------RALQRN 239
RA Q N
Sbjct: 168 DIKLKTERASQEN 180
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 18/198 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----EDAFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ M++ W++ G
Sbjct: 168 DIKAK--MDKNWKATAAG 183
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Query: 36 YKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSS 95
Y + + W+M K YDYL K LL+GDS VGK +L RF D S
Sbjct: 6 YTIAVYLWVM--------AKTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSF 47
Query: 96 ESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVY 155
+ F S G + +K TI +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVY
Sbjct: 48 NNSFISTIG-----IDFKIRTIEVDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVY 102
Query: 156 DITNKWSFDGIDRWLKEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFF 214
DITN+ SFD I W++ +EEHA V ++++GN+ + R V+ E AI+ F
Sbjct: 103 DITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCDVEERRQVSRERGEQLAIEYGTKFL 162
Query: 215 EVSPLCDFNIRESFTELSR 233
E S + N+ E+F L+R
Sbjct: 163 ETSAKANINVEEAFFTLAR 181
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 18/198 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----EDAFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ M++ W++ G
Sbjct: 168 DIKAK--MDKNWKATAAG 183
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASADVEKMILGNKCDMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFVTLAR 167
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 16/202 (7%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-STYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKERADKLAREHGIRFFETSAKSSTNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNKVGRKPL 255
L ++G RL SNK L
Sbjct: 168 DILHKSGARRLGDSNKASSAAL 189
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 16/204 (7%)
Query: 48 KPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYD 107
+PV A K YD+L K LL+GDS VGK ++ RF D + S + S G
Sbjct: 1824 QPVSAMAKAYDHLFKLLLIGDSGVGKTCLII---------RFAEDNFN-STYISTIG--- 1870
Query: 108 DMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGID 167
+ +K T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I
Sbjct: 1871 --IDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQ 1928
Query: 168 RWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W+K ++E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E
Sbjct: 1929 NWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDE 1988
Query: 227 SFTELSRRALQRNGMERLWRSNKV 250
+F L+R L ++G R NK+
Sbjct: 1989 AFNSLARDILLKSGGRRSGNGNKL 2012
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L+GKR+KLQ+WDT+GQ RF TI SY RGA GILLVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELNGKRIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EEHA V K+L+GN+ + R V+ + E A ++ + FFE S + NI ++F L+
Sbjct: 108 EEHANEDVEKMLLGNKCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EDILHK 173
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFHTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R ++ E AI + + F E S + NI +FTEL+
Sbjct: 108 DEHANEDVEKMILGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILNK 173
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFHTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R ++ E AI + + F E S + NI +FTEL+
Sbjct: 108 DEHANEDVEKMILGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILNK 173
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T E + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKQYDLLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EEHA V K+L+GN+ + R V+ E A K+ + F E S NI ++F +L+
Sbjct: 108 EEHASEDVEKMLLGNKCDIEEKRMVSKERGEEIAGKHGIRFLETSAKAKINIDKAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILNK 173
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S + N+ SF L+R
Sbjct: 108 EHASADVEKMILGNKCDINEKRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLAR 167
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEE 168
Query: 227 SFTELSRRALQR 238
F ++R QR
Sbjct: 169 VFFSIARDIKQR 180
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASADVEKMILGNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLAR 167
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 18/198 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----EDAFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ M++ W++ G
Sbjct: 168 DIKAK--MDKKWKATAPG 183
>gi|388518593|gb|AFK47358.1| unknown [Medicago truncatula]
Length = 216
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 111/185 (60%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TII +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTIITAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASSDVEKMILGNKCDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLAR 167
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 2 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 47 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 106
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 107 EHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 166
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I WL+ +E+
Sbjct: 56 TIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A K + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDE 168
Query: 227 SFTELSRRALQR 238
F ++R QR
Sbjct: 169 VFFSIARDIKQR 180
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 16/201 (7%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V A K YD+L K LL+GDS VGK ++ RF D + + + S G
Sbjct: 23 VSAMAKAYDHLFKLLLIGDSGVGKTCLII---------RFAEDNFNNT-YISTIG----- 67
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K T+ +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W
Sbjct: 68 IDFKIRTVDIDGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW 127
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+K ++E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F
Sbjct: 128 MKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAF 187
Query: 229 TELSRRALQRNGMERLWRSNK 249
+ L+R L ++G RL +K
Sbjct: 188 SSLARDILLKSGGRRLGNGSK 208
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 46 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 105
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + E A++ + F E S + N+ +F L+R
Sbjct: 106 EHASSDVEKMVLGNKCDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLAR 165
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L+GKR+KLQ+WDT+GQ RF TI SY RGA GILLVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELNGKRIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EEHA V K+L+GN+ + R V+ + E ++ + FFE S + NI ++F L+
Sbjct: 108 EEHANEDVEKMLLGNKCDMEDVRVVSKAKGEQIVSEHNIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EDVLHK 173
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDE 168
Query: 227 SFTELSRRALQR 238
F ++R QR
Sbjct: 169 VFFSIARDIKQR 180
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLI---------IRFAEDNYN-TTYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K +
Sbjct: 48 KTIEVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIR 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V+ E A ++ + FFE S N+ ESF L+R
Sbjct: 108 ENASAGVTRMLLGNKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALAR 167
Query: 234 RALQRN 239
LQ++
Sbjct: 168 DILQKS 173
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 119/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-NFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G RL SNK
Sbjct: 168 DILLKSGGRRLGNSNK 183
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLAR 167
Query: 234 RALQR 238
+ R
Sbjct: 168 DIMTR 172
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 120/199 (60%), Gaps = 16/199 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A K YD+L K LL+GDS VGK ++ RF D + + + S G +
Sbjct: 2 AMAKAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----ID 46
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K
Sbjct: 47 FKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMK 106
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
++E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+
Sbjct: 107 SIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSS 166
Query: 231 LSRRALQRNGMERLWRSNK 249
L+R L ++G RL +NK
Sbjct: 167 LARDILLKSGGRRLKNNNK 185
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIE 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + E AI++ + F E S N+ ++F L+R
Sbjct: 108 EHASQDVDKMILGNKCDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLAR 167
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 118/210 (56%), Gaps = 20/210 (9%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P +YDYL K L++GDS VGK +L RF D ++S F S G
Sbjct: 68 PRFIKMSEYDYLFKILIIGDSGVGKSSLL---------LRFSDDTFNDS-FLSTIG---- 113
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K T+ +D K VKLQ+WDT+GQ RF TI SY +GAQGI++VYD+TNK SFD + +
Sbjct: 114 -VDFKIKTVNIDKKSVKLQIWDTAGQERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKK 172
Query: 169 WLKEVEEH-APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
WL ++E++ AP V K+LVGN++ + NR V ++ A+ YA M F E S N+ +
Sbjct: 173 WLDDIEKYAAPSVTKMLVGNKIDVEANRQVKSQTAKDYATSQNMTFIESSAKESTNVERA 232
Query: 228 F----TELSRRALQRNGMERLWRSNKVGRK 253
F L + +G ++ KVG K
Sbjct: 233 FLLMAESLKNSSKTTHGSGSAKKNIKVGEK 262
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-STYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++++ FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L + G R S+K
Sbjct: 168 DILLKTGGRRSGNSSK 183
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF---------RFSED-AFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI + F E S N+ E F L+R
Sbjct: 108 EHASADVEKMVLGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLAR 167
Query: 234 RALQR 238
+ R
Sbjct: 168 DIMAR 172
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 6 KTYDYLFKLLLIGDSGVGKTCIL---------FRFSEDAFN-STFISTIG-----IDFKI 50
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 51 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 110
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT E A++ + F E S + N+ +F L+R
Sbjct: 111 EHASSDVEKMVLGNKCDINDKRQVTKMGGEKLALEYGIKFMETSAKSNINVENAFLTLAR 170
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L+GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EEHA V K+L+GN+ + R ++ EM A ++ + F+E S + NI +F L+
Sbjct: 108 EEHASEDVEKMLLGNKCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 TDILHK 173
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 16/183 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +QYD+L+K LL+GDS VGK +L + E +F S F + G +
Sbjct: 3 AGSQQYDHLIKLLLIGDSGVGKSCLLL-RFSEDQFT---------SSFITTIG-----ID 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILL YD+T++ SF+ + W++
Sbjct: 48 FKIRTVELDGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMR 107
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+E+HA GV KVLVGN+ R ++T + E A + + FFE S + N+ ++F
Sbjct: 108 NIEQHASDGVSKVLVGNKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDAFFA 167
Query: 231 LSR 233
++R
Sbjct: 168 IAR 170
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALF---------RFSEDAFN-ATFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIQNWVRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA P V K+++GN+ + R V+ + E AI + F E S + NI +F L+R
Sbjct: 108 EHASPDVEKMILGNKCDITHKRQVSREQGEKLAISFGIKFMETSAKANINIDNAFFTLAR 167
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 57
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 58 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQH 117
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 118 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARD 177
Query: 235 ALQR 238
QR
Sbjct: 178 IKQR 181
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 2 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 47 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 106
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 107 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 166
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDINEKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLTLAR 167
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTVDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASADVERMVLGNKCDMNDRRQVSKERGEKLAIDYSIKFLETSAKSSINVEEAFLTLAR 167
Query: 234 RALQR 238
+ R
Sbjct: 168 DIMSR 172
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E A+ + F E S + N+ E+F L+R
Sbjct: 108 EHASADVERMILGNKCDVNDKRQVSKDRGEKLALDYGIKFMETSAKANINVEEAFLTLAR 167
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLAR 167
>gi|432863260|ref|XP_004070049.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 239
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 107/192 (55%), Gaps = 25/192 (13%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF------RFS----EDSFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GI+LVYDI N+ SFD I W++ +E
Sbjct: 48 RTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDICNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI ++ F E S N+ ESF L
Sbjct: 108 EHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYRVKFLETSAKSSLNVEESFVHL-- 165
Query: 234 RALQRNGMERLW 245
ME LW
Sbjct: 166 -------MEILW 170
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V KVLVGN+ + R V T + + A + + FFE S + N+ E F + R
Sbjct: 117 ASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNERRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 119/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G RL +NK
Sbjct: 168 DILLKSGGRRLKNNNK 183
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSED-AFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ + K YDYL K LL+GDS VGK +L RF D + S F S G
Sbjct: 14 ISSMAKTYDYLFKLLLIGDSGVGKTCVL---------FRFSED-AFNSTFISTIG----- 58
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W
Sbjct: 59 IDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNW 118
Query: 170 LKEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
++ +EEHA V K+++GN+ + R V+ E A+ + F E S + N+ +F
Sbjct: 119 IRNIEEHASADVEKMVLGNKCDINDKRQVSKDRGEQLALDYGIKFMETSAKANINVENAF 178
Query: 229 TELSR 233
L+R
Sbjct: 179 LTLAR 183
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSRERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVNIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 EHASAGVERLLLGNKCDMEAKRRVQKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGSRRRGNDNK 183
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|390367846|ref|XP_784996.3| PREDICTED: ras-related protein Rab-40B-like [Strongylocentrotus
purpuratus]
Length = 157
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 102/199 (51%), Gaps = 66/199 (33%)
Query: 176 HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
HAPGVPK+LVGNRLHLAF R V+ EA+ YAI+N+MA+FEVSPLCDFN+ ES T
Sbjct: 6 HAPGVPKILVGNRLHLAFKRQVSGEEAQDYAIRNEMAYFEVSPLCDFNVTESLT------ 59
Query: 236 LQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFA 295
ELSR L+RNGMERLWR+NK
Sbjct: 60 ---------------------------ELSRLVLKRNGMERLWRTNK------------- 79
Query: 296 GLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMT 355
V+SLQ+ CCR IV T+ Y+I++LP+P ++S LKS+A
Sbjct: 80 --------------------VLSLQDFCCRTIVNCTSTYSIDKLPIPMSLRSRLKSFADA 119
Query: 356 SYTTMTMTTSARQHTKKLR 374
++ M +KK R
Sbjct: 120 NHMHRYMLPPLDIRSKKRR 138
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 57
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 58 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 117
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V KVL+GN+ + R V+T + + A + + FFE S + N+ + F ++R
Sbjct: 118 ASDNVNKVLIGNKADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARD 177
Query: 235 ALQR 238
QR
Sbjct: 178 IKQR 181
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L + D + + F S G + +K
Sbjct: 8 KKAYDLLFKLLLIGDSGVGKTCVLFR----------YADDTFNTTFISTIG-----IDFK 52
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L+GKR+KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SFD I +WL+ +
Sbjct: 53 IKTIELEGKRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNI 112
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E HA V ++L+GN+ R V A ++F E S ++NI E+F +L+
Sbjct: 113 EMHASADVERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLA 172
Query: 233 RRALQR 238
++ L++
Sbjct: 173 KQILRK 178
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI+ + F E S N+ ++F L+R
Sbjct: 108 EHASADVEKMILGNKCDMNDKRQVSKDRGEQLAIEYGIKFMETSAKASINVEDAFFTLAR 167
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 116/209 (55%), Gaps = 23/209 (11%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SFD I +WL+ +
Sbjct: 48 IKTIELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVSIERGESIAREHDIRFMETSAKANINIERAFRELA 167
Query: 233 RRALQR-------NGMERLWRSNKVGRKP 254
L + + +R+ + G KP
Sbjct: 168 EAILDKTSGKETTDNPDRVVVNRGTGDKP 196
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 16/198 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SFDG+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQ 168
Query: 235 ALQRNGMERLWRSNKVGR 252
+ +++ SN +
Sbjct: 169 IKESMNQQKMEDSNAASK 186
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K LL+GDS VGK +L RF + SE+ + S G + +K
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLL---------IRFADESFSET-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGAQGI++VYD+T+K SF + WL+E+E
Sbjct: 49 TIDLDGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEH 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V ++LVGN+ L +R V T +A +A ++QM F E S N+ ++F E++R+
Sbjct: 109 YANSTVNRLLVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQ 168
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN SF+ I W++ +E
Sbjct: 48 RTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + A+ + + F E S N+ E+F L+R
Sbjct: 108 EHAAADVEKMILGNKCDMNDKRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFISLAR 167
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 106/184 (57%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSED-SFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GI+LVYDI+N+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI + F E S N+ E+F ++R
Sbjct: 108 EHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMAR 167
Query: 234 RALQ 237
L
Sbjct: 168 DILH 171
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K LL+GDS VGK +L RF + SE+ + S G + +K
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLI---------RFADESFSET-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGAQGI++VYD+T+K SF + WL+E+E
Sbjct: 49 TIDLDGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEH 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V ++LVGN+ L +R V T +A +A ++QM F E S N+ ++F E++R+
Sbjct: 109 YANSTVNRLLVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQ 168
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMVLGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F + R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 16/190 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-NFNSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++++ FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLAR 167
Query: 234 RALQRNGMER 243
L + G R
Sbjct: 168 DILLKTGGRR 177
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 45
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 46 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 105
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E+F L+R
Sbjct: 106 EHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLAR 165
Query: 234 RALQR 238
+ +
Sbjct: 166 DIMTK 170
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F + R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-NFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R SNK
Sbjct: 168 DILLKSGSRRSGNSNK 183
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 16/196 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQRNGMERLWRSN 248
LQ+ ++ R N
Sbjct: 168 EDILQKTPVKEPDREN 183
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M T P A + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 1 MATPPARA-RADYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K TI LD KR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTIELDSKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNM 164
Query: 223 NIRESFTELSRRALQR 238
N+ E F ++R QR
Sbjct: 165 NVEEVFFSIARDIKQR 180
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI DGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIEQDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S D N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 16/190 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-NFNSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++++ FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLAR 167
Query: 234 RALQRNGMER 243
L + G R
Sbjct: 168 DILLKTGGRR 177
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKQYDLLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+L+GN+ +A R V+ E A + + F E S + I ++F +L+
Sbjct: 108 DEHASEDVEKMLLGNKCDMADRRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 57
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 58 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQH 117
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 118 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARD 177
Query: 235 ALQR 238
Q+
Sbjct: 178 IKQK 181
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V T E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLIGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W+K +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIKNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVSKILVGNKADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W+ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+KQYD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKQYDLLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+L+GN+ +A R V+ E A + + F E S + I ++F +L+
Sbjct: 108 DEHASEDVEKMLLGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSED-AFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SFD I W++ +E
Sbjct: 48 RTIEMDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELNSGRQVSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLAR 167
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKSDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASSDVEKMILGNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V E A ++ + F E S + NI E+F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELA 167
Query: 233 RRALQR 238
+ L +
Sbjct: 168 QAILDK 173
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F +++
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAK 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E+F L R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLGR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ +A R V+ E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SFD I +WL+ +
Sbjct: 48 IKTIELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ +A R V E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMADKRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-STYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 KTIDVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V+ E A + + FFE S N+ ESF L+
Sbjct: 108 ENASAGVSRMLLGNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAH 167
Query: 234 RALQRN 239
LQ++
Sbjct: 168 DILQKS 173
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T E A ++ + F E S D NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELT 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EAILEK 173
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIE 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 EHASQDVEKMVLGNKCDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLAR 167
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 4 PPARPRADYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI +DGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIEMDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEE 168
Query: 227 SFTELSRRALQR 238
F +++ QR
Sbjct: 169 VFFSIAKDIKQR 180
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F + R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLI---------IRFAED-NFNSTYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 KTIEVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V+ E A + + FFE S N+ ESF L+R
Sbjct: 108 ENASAGVSRMLLGNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALAR 167
Query: 234 RALQRN 239
L+++
Sbjct: 168 DILKQS 173
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 119/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + ++
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFRI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G RL +NK
Sbjct: 168 DILLKSGGRRLKNNNK 183
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASSDVEKMILGNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHLAFN-RTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + N R V T + + A + + FFE S + + E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDENKRAVPTSKGQALADEYGIKFFETSAKTNLTLEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFHTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAKWLRYI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ AI + + F E S + NI +FTEL+
Sbjct: 108 DEHANEDVEKMILGNKCDMEDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILNK 173
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V KVLVGN+ + R V T + + A + + FFE S + N+ E F +++
Sbjct: 117 ASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F + R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLI---------IRFAED-NFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASLDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMSDKRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDG+R+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGRRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSLTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 24/204 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
K YD+L K LL+GDS VGK ++ RF SE F SG Y + +
Sbjct: 3 KSYDHLFKLLLIGDSGVGKTCLI---------IRF-----SEDSF---SGTYISTIGIDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K
Sbjct: 46 KIRTVEVEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKS 105
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++E+A GV ++L+GN+ + R V+ +AE ++ + FFE S N+ E+F L
Sbjct: 106 IKENASAGVERLLLGNKCDMEVKRKVSRDQAEKLCREHGIRFFETSAKSSLNVEEAFNTL 165
Query: 232 SRRALQRNGMERLWRSNKVGRKPL 255
+R L R+ + +S ++ ++PL
Sbjct: 166 ARDILLRS----IKKSAQLPKRPL 185
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTSIL---------FRFSEDAFNIS-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK+VKLQ+WDT+GQ RF TI +Y RG+ GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+++GN+ L R V+ E A++ Q+ F E S N+ +F L+R
Sbjct: 108 ENASADVEKMILGNKCDLEAKRQVSKERGEQLAVEYQIKFIETSAKDSLNVESAFYTLAR 167
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGKKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|71026455|ref|XP_762899.1| small GTP-binding protein Rab1 [Theileria parva strain Muguga]
gi|68349851|gb|EAN30616.1| small GTP-binding protein rab1 [Theileria parva]
Length = 227
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRF---WLDGSSESPFCSGSGKYDDMLA 111
K+YDYL K +++GDS GK +L RF F ++D + + S G +
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLL------RFAVFLFIFIDNTYSESYMSTIG-----VD 50
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI-DRWL 170
+K T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TNK SFD I + WL
Sbjct: 51 FKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWL 110
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
++++++A V K+L+GN++ LA +R V+ EA+ A +N M + E S D N+ ++FT
Sbjct: 111 QDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFT 170
Query: 230 ELSR 233
+++
Sbjct: 171 TIAK 174
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 118/205 (57%), Gaps = 20/205 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ LA R V A+ +A N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLADKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQ 168
Query: 235 ----ALQRNGMERLWRSNKVGRKPL 255
Q+N E + N G L
Sbjct: 169 IKESMTQQNMNESQQKKNDKGNVNL 193
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W+ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V + + A + M FFE S + N+ E F +++
Sbjct: 117 ASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 16/201 (7%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V A K YD+L K LL+GDS VGK ++ RF D + + + S G
Sbjct: 39 VSAMAKAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG----- 83
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W
Sbjct: 84 IDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW 143
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+K ++E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F
Sbjct: 144 MKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAF 203
Query: 229 TELSRRALQRNGMERLWRSNK 249
+ L+R L ++G R NK
Sbjct: 204 SSLARDILLKSGGRRSGNGNK 224
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T E A ++ + F E S D NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDKRVVSTGRGEAIAREHGIRFMETSAKADINIDRAFNELT 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EAILEK 173
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V KVLVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKSYDYLFKLLLIGDSGVGKTCILF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI + GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDIT + +FD I +WL+ +
Sbjct: 48 IKTIEMQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EEHA V K+++GN+ + R V+ E A ++ + F E S + NI ++F L+
Sbjct: 108 EEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLA 167
Query: 233 RRALQR 238
+ L++
Sbjct: 168 QDILKK 173
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARD 176
Query: 235 ALQR 238
+R
Sbjct: 177 IKKR 180
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + SP + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF------RFSEEAFNTTFISPIG---------IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V KVLVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKVLVGNKADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELIDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDG+R+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGERIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLAR 167
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 104/184 (56%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSED-SFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GI+LVYDI N+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI + F E S N+ E+F + R
Sbjct: 108 EHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFLETSAKSGLNVEEAFYTMGR 167
Query: 234 RALQ 237
L
Sbjct: 168 DILH 171
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DEAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T + E A ++ + F E S + NI ++F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 17/186 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYL K +++GDS GK +L RF + SES + S G + +K
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLL---------LRFADNTYSES-YMSTIG-----VDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR-WLKEV 173
T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TNK SFD I + WL+++
Sbjct: 47 KTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDI 106
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+++A V K+L+GN++ LA NR V+T EA+ A +N M + E S D N+ ++F ++
Sbjct: 107 DKYATSNVCKLLIGNKIDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAFITIA 166
Query: 233 RRALQR 238
+ R
Sbjct: 167 KALKDR 172
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 16/183 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-STYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI ++GK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ S++ I W+K ++
Sbjct: 48 KTIEVEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V+ E A ++ + FFE S N+ ESFT L+R
Sbjct: 108 ENASAGVSRMLLGNKCDIEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLAR 167
Query: 234 RAL 236
L
Sbjct: 168 DIL 170
>gi|313236131|emb|CBY11455.1| unnamed protein product [Oikopleura dioica]
Length = 178
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 38/187 (20%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A KQ+D+L K L++G++ VGK IL RF
Sbjct: 3 APHKQHDHLFKLLIIGNAGVGKSSILV------RFA------------------------ 32
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
++GK++KLQ+WDT+GQ RF TI +Y RGA G+++VYD+T+ SF G+ +W+
Sbjct: 33 -------VEGKKIKLQIWDTAGQERFRTITATYYRGAHGVVVVYDLTDAESFTGVQKWIN 85
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
E++ H VP+VLVGN++ + NR V +AEMYA + + +FE S + + E FTE+
Sbjct: 86 EIQNHCEDVPRVLVGNKVD-SPNRVVEKNDAEMYAQQQNIKYFETSAKSNIGVEEMFTEI 144
Query: 232 SRRALQR 238
+R+AL +
Sbjct: 145 TRQALHQ 151
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI DGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIEQDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V KVLVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKVLVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T + E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EAILEK 173
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 26/202 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ RTV+ E A ++ + F E S + NI ++F +L+
Sbjct: 108 DEHANEDVEKMILGNKCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLA 167
Query: 233 RRALQRNGMERLWRSNKVGRKP 254
L + GR+P
Sbjct: 168 EAILDKTA----------GREP 179
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S +FN+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 118/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G +R NK
Sbjct: 168 DILLKSGGQRSGNGNK 183
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 18/190 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK IL RF DGS F S G + +K
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILF------RFSDNKFDGS----FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
I +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T + +F+ I W++ +
Sbjct: 48 RIIEIDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI++ + F E S + N+ E+F L+R
Sbjct: 108 EHAAADVEKMILGNKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLAR 167
Query: 234 RALQRNGMER 243
++ MER
Sbjct: 168 DIKEK--MER 175
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMVLGNKCDINDKRQVSKEMGEKLALEYGIKFMETSAKSNINVENAFLTLAR 167
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2; Flags:
Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+ VYDITN+ SFD I W++ +E
Sbjct: 48 RTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EAILEK 173
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ R TI +Y RGA+GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 111/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIDLDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+ VE+HA GV K+L+GN+ R V+T + A + + F EVS + N+ E+F
Sbjct: 106 QNVEQHATEGVNKILIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAFL 165
Query: 230 ELSRRALQR 238
L+R +R
Sbjct: 166 LLARDIKKR 174
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYL K +L+GDS VGK +L RF R + S+S + +
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLM------RFTRNEFNIESKSTIG---------VEFA 48
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T I+LD K++K Q+WDT+GQ R+ I +Y RGA G L+VYDIT + SFD + RWLKE+
Sbjct: 49 TRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKEL 108
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
EHA + +LVGN+ L R V+T EA+ +A +N ++F E S + N+ E+F
Sbjct: 109 REHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK L+ RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKT---CALF------RFSEDAFN-ATFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA P V K+++GN+ R V+ + E A + F E S + NI +F L+R
Sbjct: 108 EHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T + E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R SNK
Sbjct: 168 DILLKSGGRRSGNSNK 183
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKSYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDIT+ +FD I +WL+ +
Sbjct: 48 IKTIELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ + EM A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDVEDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELA 167
Query: 233 RRALQR 238
+ L +
Sbjct: 168 QAILTK 173
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 105/184 (57%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSED-SFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GI+LVYD +N+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDTSNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI + F E S N+ E+F ++R
Sbjct: 108 EHASSDVEKMILGNKCDMTDRRQVSKDRGEKLAIDYGVKFMETSAKSGLNVEEAFYTMAR 167
Query: 234 RALQ 237
L
Sbjct: 168 DILH 171
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T + E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEERRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 16/190 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK IL RF DGS F S G + +K
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILF------RFSDNKFDGS----FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
I +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T + +F+ I W++ +
Sbjct: 48 RIIEIDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI++ + F E S + N+ E+F L+
Sbjct: 108 EHAAADVEKMILGNKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLAX 167
Query: 234 RALQRNGMER 243
+ MER
Sbjct: 168 XRDIKEKMER 177
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 109/183 (59%), Gaps = 17/183 (9%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL+K LL+GDS VGK +L RF DGS + F + G + +K TI
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRTI 57
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+HA
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHA 117
Query: 178 -PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 118 SDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDI 177
Query: 236 LQR 238
QR
Sbjct: 178 KQR 180
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 17/185 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++L+GN+ + R V E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMLLGNKCDMD-KRQVAKERGEKLAIDYSIKFLETSAKAGLNVEEAFLTLAR 166
Query: 234 RALQR 238
+ R
Sbjct: 167 DIMGR 171
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 25 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 69
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 70 TVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 129
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + A + + FFE S + N+ + F ++R
Sbjct: 130 HASDNVNKILVGNKADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 189
Query: 234 RALQR 238
QR
Sbjct: 190 DIKQR 194
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSTKTNLNVEEVLFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVERMVLGNKCDVNDKRQVSKERGEKLALEYGIKFMETSAKANINVENAFLTLAR 167
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK L+ RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKT---CALF------RFSEDAFN-ATFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA P V K+++GN+ R V+ + E A + F E S + NI +F L+R
Sbjct: 108 EHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 16/191 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P ++ YD+L+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 4 PPSRSRGDYDHLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SFD I
Sbjct: 50 -IDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W++ +E+HA V K+LVGN++ + R V+T + + A + + FFE S + N+ +
Sbjct: 109 WIRNIEQHASDNVNKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQV 168
Query: 228 FTELSRRALQR 238
F ++R QR
Sbjct: 169 FFAMARDVKQR 179
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LD KR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDSKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GD+ VGK +L RF DGS + F + G + +K T
Sbjct: 12 YDYLIKLLLIGDTGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F + +
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEGFFTLAR 167
Query: 234 RALQR 238
+ +
Sbjct: 168 DIMTK 172
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V + + A + + FFE S + N+ E F +++
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAK 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 17/216 (7%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N M F E S L N+ E+F ++R+
Sbjct: 109 YATSAVLKLLVGNKCDLDGKRMVEYDVAKEFAESNNMPFLETSALDSTNVEEAFLTMARQ 168
Query: 235 ALQRNGMERLWR-SNKVGRKPLINFESFTELSRRAL 269
+ +++ SN L N +S L+ ++L
Sbjct: 169 IKESFAQQKIQDGSNANANSNLQNDKSNVNLNGQSL 204
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V + + A + + FFE S + N+ E F +++
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAK 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S + N+ SF L+R
Sbjct: 108 EHASADVEKMVLGNKCDINDKRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLAR 167
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 17/181 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F S G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTGFISTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F S+
Sbjct: 116 HASDNVNKILVGNKADMDESERAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFFHSK 175
Query: 234 R 234
R
Sbjct: 176 R 176
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFA----DDAFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI L+GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIDLNGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVERMVLGNKCDVNDRRQVSKERGEQLALEYGIKFMETSAKANINVENAFLTLAR 167
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 16/187 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKAYDYLFKLLLIGDSGVGKTCLLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ +DGK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDIT + +FD I +WL+ +
Sbjct: 48 IKTVEVDGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA GV ++++GN+ + R + + E A ++ + F+E S + + E+F L+
Sbjct: 108 DEHASEGVERMILGNKCDMNDKRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLT 167
Query: 233 RRALQRN 239
+ L+++
Sbjct: 168 QDILRKH 174
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 112/190 (58%), Gaps = 16/190 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SFDG+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQ 168
Query: 235 ALQRNGMERL 244
+ ++L
Sbjct: 169 IKESMAQQKL 178
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTSILF---------RFSEDAFNIS-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK+VKLQ+WDT+GQ RF TI +Y RG+ GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+++GN+ L R V+ E A++ Q+ F E S N+ +F L+R
Sbjct: 108 ENASADVEKMILGNKCDLDAKRQVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLAR 167
>gi|308485078|ref|XP_003104738.1| CRE-RAB-8 protein [Caenorhabditis remanei]
gi|308257436|gb|EFP01389.1| CRE-RAB-8 protein [Caenorhabditis remanei]
Length = 211
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 115/202 (56%), Gaps = 19/202 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
Query: 234 ---RALQRNGMERLWRSNKVGR 252
+++N M S+ GR
Sbjct: 168 DIKSKMEQNEMRAGGSSSNAGR 189
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E AI+ + F E S + E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELEEKRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLAR 167
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS V K +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVSKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNMEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI L+GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF I W++ +E
Sbjct: 48 RTIELEGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIRTWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ + E A++ + F E S N+ E F L+R
Sbjct: 108 EHASNDVEKMILGNKCDMNDRRQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLAR 167
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 16/188 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DNHFTTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +FD I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMEDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELA 167
Query: 233 RRALQRNG 240
L ++
Sbjct: 168 EAILDKSA 175
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 24/196 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++ + +YDYL K +L+GDS VGK +L RF R + S+S +
Sbjct: 1 MSQEDEYDYLFKTVLIGDSGVGKSNLLM------RFTRNEFNIESKSTIG---------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T I+LD K++K Q+WDT+GQ R+ I +Y RGA G L+VYDIT + SFD + RWL
Sbjct: 46 EFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWL 105
Query: 171 KEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF- 228
KE+ +HA + +LVGN+ L R V+T EA+ +A +N ++F E S + N+ E+F
Sbjct: 106 KELRDHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQ 165
Query: 229 ---TEL----SRRALQ 237
TE+ S RA++
Sbjct: 166 TVLTEIFRIVSNRAME 181
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI+ + F E S N+ E+F L R
Sbjct: 108 EHASADVEKMILGNKCDMEDRRQVSRDRGEKLAIEYGVKFMETSAKSSINVEEAFFTLGR 167
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 16/202 (7%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V A K YD+L K LL+GDS VGK ++ RF D S + + S G
Sbjct: 88 VSAMAKAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-SFNNTYISTIG----- 132
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W
Sbjct: 133 IDFKIRTVDVEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW 192
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+K ++E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F
Sbjct: 193 MKSIKENASAGVERLLLGNKCDMEAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAF 252
Query: 229 TELSRRALQRNGMERLWRSNKV 250
+ L+R L ++G R S+K
Sbjct: 253 SSLARDILLKSGGRRSGNSHKA 274
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 16/188 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DNHFTTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +FD I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++ + F E S + NI +F+EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELA 167
Query: 233 RRALQRNG 240
L +
Sbjct: 168 EAILDKTA 175
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V T + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL+K LL+GDS VGK +L RF DGS + F + G + +K T
Sbjct: 12 YVYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 117 ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARD 176
Query: 235 ALQR 238
QR
Sbjct: 177 IKQR 180
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT E A++ + F E S N+ E+F L+R
Sbjct: 108 ENASADVEKMLLGNKCELNEKRQVTRDRGEQLAVEYGIKFMETSAKASINVDEAFFTLAR 167
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV-------EN 160
Query: 234 RALQRNGMERLWRSNKVGRKP 254
R +NG +++ R G +P
Sbjct: 161 RHQSKNG-QKIGRQQPPGEQP 180
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-NFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 116/197 (58%), Gaps = 17/197 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-STYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ + GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIXGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++ + FFE S N+ E+F L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEVKRKVQKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLAR 167
Query: 234 RALQRNGMERLWRSNKV 250
L ++G R SNK
Sbjct: 168 DILLKSG-RRSGNSNKA 183
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV-------EN 160
Query: 234 RALQRNGMERLWRSNKVGRKP 254
R +NG +++ R G +P
Sbjct: 161 RHQSKNG-QKIGRQQPPGEQP 180
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTCLL---------FRFAED-SFNNTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GILLVY+ITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKNWVRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ AI+ + F E S + N+ +F L+R
Sbjct: 108 EHASANVEKIILGNKCDMEDKRQVSRERGAQLAIEYGVKFMETSAKANINVESAFFTLAR 167
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILKK 173
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV-------EN 160
Query: 234 RALQRNGMERLWRSNKVGRKP 254
R +NG +++ R G +P
Sbjct: 161 RHQSKNG-QKIGRQQPPGEQP 180
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 22/190 (11%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHLAFNR------TVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA V K+LVGN+ + ++ +V T + + A + + FFE S + N+ E F
Sbjct: 116 HASDNVNKILVGNKADMDESKRVRTFSSVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 175
Query: 229 TELSRRALQR 238
+++ QR
Sbjct: 176 FSIAKDIKQR 185
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDFLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF------RFS----EDAFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI L+GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W++ +E
Sbjct: 48 RTIELNGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVEKMILGNKCDMNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLAR 167
Query: 234 RALQR 238
+ R
Sbjct: 168 DIMAR 172
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 17/188 (9%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
++ YDYL+K LL+GDS VGK +L RF D S + F + G + +
Sbjct: 8 SRADYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDF 52
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++
Sbjct: 53 KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 112
Query: 173 VEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F
Sbjct: 113 IEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFT 172
Query: 231 LSRRALQR 238
++R QR
Sbjct: 173 IARDIKQR 180
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 16/190 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLAR 167
Query: 234 RALQRNGMER 243
L ++G R
Sbjct: 168 DILLKSGGRR 177
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 16/177 (9%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK +L RF D + S F S G + +K TI
Sbjct: 4 DYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKIRTI 48
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +EEHA
Sbjct: 49 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA 108
Query: 178 PG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 109 SADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 165
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 17/181 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYL K +++GDS GK +L RF + SES + S G + +K
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLL---------LRFADNTYSES-YMSTIG-----VDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI-DRWLKEV 173
T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TNK SFD I + WL+++
Sbjct: 47 KTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDI 106
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+++A V K+L+GN++ LA +R V+ EA+ A +N M + E S D N+ ++FT ++
Sbjct: 107 DKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIA 166
Query: 233 R 233
+
Sbjct: 167 K 167
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF + + + F S G + +K
Sbjct: 16 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----EDAFNTTFISTIG-----IDFKI 60
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 61 RTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 120
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E AI+ + F E S + E+F L+R
Sbjct: 121 ENASADVEKMLLGNKCELEEKRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLAR 180
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILKK 173
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV-------EN 160
Query: 234 RALQRNGMERLWRSNKVGRKP 254
R +NG +++ R G +P
Sbjct: 161 RYQSKNG-QKIGRQQPPGEQP 180
>gi|347969093|ref|XP_311848.5| AGAP003028-PA [Anopheles gambiae str. PEST]
gi|333467702|gb|EAA07904.5| AGAP003028-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 19/185 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
++YD+L K L++GDS VGK +L RF S++ F SG Y + +
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLL---------IRF-----SDNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T++++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL+E
Sbjct: 46 KIRTVVINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFGNVKRWLQE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+E + V KVLVGN+ + VTT +AE +A + ++ FE S + N+ E F ++
Sbjct: 106 IESNCDIVNKVLVGNKNDDPTRKVVTTEDAERFANQMEIKLFETSAKDNLNVEEMFLAIT 165
Query: 233 RRALQ 237
+ L+
Sbjct: 166 EQVLR 170
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + W+ E+++
Sbjct: 49 TIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDK 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+A GV K+LVGN+ L RTVT E + +A M F E S N+ ++F
Sbjct: 109 YAMEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAF 162
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDY K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYWFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVERMVLGNKCDVNDKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLHLAR 167
>gi|357472677|ref|XP_003606623.1| Small GTP-binding protein [Medicago truncatula]
gi|355507678|gb|AES88820.1| Small GTP-binding protein [Medicago truncatula]
Length = 216
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 110/187 (58%), Gaps = 19/187 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIR--SYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGKR+KLQ+WDT+GQ RF +I +Y RGA GILLVYD+T++ SF+ I W++ +
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFSFVINNFTYYRGAMGILLVYDVTDEASFNNIRNWIRNI 115
Query: 174 EEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F +
Sbjct: 116 EQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI 175
Query: 232 SRRALQR 238
+R QR
Sbjct: 176 ARDIKQR 182
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 16/171 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL---------FRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV 158
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCVLF------RFS----DDAFNATFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T +F+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA V K+++GN+ + R VT E A + + FFE S + N+ E+F ++R
Sbjct: 108 QHASEDVEKMILGNKCDVDDKRVVTKERGEQLAREYNVRFFETSAKANINVEEAFLTIAR 167
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 112/197 (56%), Gaps = 20/197 (10%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF- 228
VE+HA GV K+L+GN+ R V+ + + A + + F EVS + NI E+F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFF 165
Query: 229 ---TELSRRALQRNGME 242
++ +R + +G E
Sbjct: 166 SLANDIKKRIIDTSGKE 182
>gi|268560906|ref|XP_002646318.1| C. briggsae CBR-RAB-8 protein [Caenorhabditis briggsae]
Length = 211
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 115/202 (56%), Gaps = 19/202 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
Query: 234 ---RALQRNGMERLWRSNKVGR 252
+++N M ++ GR
Sbjct: 168 DIKSKMEQNEMRAGGSASNTGR 189
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
EHA V K+++GN+ + R V E A ++ ++F E S + NI ++FT+L+
Sbjct: 108 NEHANEDVEKMILGNKCDMDDKRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLT 167
Query: 233 RRALQR 238
L +
Sbjct: 168 LSILNK 173
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RFP + + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLF------RFP----EDAFNTTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
EHA V ++++GN+ + R V+ E AI + F E S N+ E+
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 18/198 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVL---------FRFSED-AFNSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LV+DITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVFDITNERSFENIKTWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ +A+ A + + F E S N+ E+F L++
Sbjct: 108 EHAASDVEKMILGNKCDVVDKRQVSKEQAQQLAAEYGVKFSETSAKDGHNVEEAFMTLAK 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ M+R + N G
Sbjct: 168 DIKAK--MDRKQQENNNG 183
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 104/179 (58%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+
Sbjct: 108 ENASADVEKMLLGNKCELNEKRQVSRERGEQLAVEYGIKFMETSAKASINVEEAFLTLA 166
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYDIT++ SF+G+ WL+E++
Sbjct: 49 TVQLDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDITDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLNDKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQ 168
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 31/234 (13%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+G+S VGK +L RF D + + F S G + +K
Sbjct: 4 KAYDYLFKLLLIGESGVGKTCVLF------RFS----DDAFNASFISTIG-----IDFKI 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI++VYDITN SFD + W+K +E
Sbjct: 49 RTIELDDKKIKLQIWDTAGQERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIE 108
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V +L+GN+ + +R V+ + E A + F E S + N+ E+F +L+R
Sbjct: 109 ENASEDVELMLLGNKCDMEESRAVSKEQGEKLASDYGIPFLETSAKANINVEEAFFQLAR 168
Query: 234 R------ALQRNGMERLWR---------SNKVGRKPLINFESFTELSRRALQRN 272
+ +R + RL+R S V L+ + + +RR +RN
Sbjct: 169 NIKKKMDSKRRGEVLRLYRRILQAARTWSATVAEDTLVERKYIQDEARRLFKRN 222
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 22/213 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYL K +++GDS GK +L RF + SES + S G + +K
Sbjct: 2 KEYDYLFKIIVIGDSGCGKSSLL---------LRFADNTYSES-YMSTIG-----VDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI-DRWLKEV 173
T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TNK SFD I + WL ++
Sbjct: 47 KTVKIDNITIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDI 106
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E +A V K+L+GN++ LA NR VT+ EA+ A + M + E S D N+ ++F ++
Sbjct: 107 ERYATSNVSKLLIGNKIDLADNRVVTSEEAKQVAEAHNMNYIEASAKTDSNVEKAFLSIA 166
Query: 233 RRALQRNGMERLWRSNKVGRKPLINFESFTELS 265
++L+ + + SN P IN + +L+
Sbjct: 167 -KSLKDKATQ--YTSNPTS--PTINLNTSAKLA 194
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V + + +A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPPSKGQAFADEYGIKFFETSAKTNLNVEQVFFFIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 18/191 (9%)
Query: 51 VATQKQ--YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
+AT K YDYL+K LL+GDS VGK +L RF D S F + G
Sbjct: 1 MATSKNASYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTPSFITTIG---- 46
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILL YD+T++ SF+ I
Sbjct: 47 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRN 105
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W++ +E+HA GV K+L+GN+ + + ++ + + A ++ + F E S + + E+
Sbjct: 106 WIRNIEQHASEGVNKILIGNKCDILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEA 165
Query: 228 FTELSRRALQR 238
F L+R +R
Sbjct: 166 FYMLARDIKKR 176
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+ + + A + + F EVS + NI E+F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFF 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLANDIKKR 174
>gi|341875743|gb|EGT31678.1| hypothetical protein CAEBREN_09245 [Caenorhabditis brenneri]
gi|341876669|gb|EGT32604.1| hypothetical protein CAEBREN_03557 [Caenorhabditis brenneri]
Length = 211
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIDLDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHASEGVNKILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKANINIEKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLASDVKKR 174
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+ VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 QNVEQHATEGVNKILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF D S + F + G + +K T
Sbjct: 11 YDYLVKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFKIRT 55
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I +GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++++++H
Sbjct: 56 IEQEGKRLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQQH 115
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+L+GN+ + + + T + A + + FFE S + N+ ++FTE++R
Sbjct: 116 ASDNVNKILIGNKCDMLDKKVIETARGQALADEFGIKFFETSAKNNINVEKAFTEIARDV 175
Query: 236 LQR 238
+ R
Sbjct: 176 MVR 178
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVNWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+T E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANENVEKMILGNKSDMEDRREVSTERGEAIAREHGIRFMETSAKANINIDRAFRELA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILDK 173
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
++K YD L K LL+GDS VGK IL RF D + + F S G + +
Sbjct: 2 SKKTYDLLFKILLIGDSGVGKTCILF------RFS----DDAFNTTFISTIG-----IDF 46
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYD+T + SF+ I++W++
Sbjct: 47 KIKTIELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINKWIRN 106
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++EHA V K+++GN++ A R V EAE A + + F E S + NI +F L
Sbjct: 107 IDEHASKDVEKIILGNKVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGL 166
Query: 232 SRRALQR 238
+ L +
Sbjct: 167 ANDILNK 173
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 54 MAGSRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 98
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 99 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 158
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ RTV+T + A + + F EVS + N+ ++F
Sbjct: 159 SNVEQHATEGVNKILIGNKCDWDDKRTVSTERGQALADELGIPFLEVSAKANINVEKAFF 218
Query: 230 ELS 232
L+
Sbjct: 219 SLA 221
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D S + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-SFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDVEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R S+K
Sbjct: 168 DILLKSGGRRSGNSHK 183
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+ VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 QNVEQHATEGVNKILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 16/190 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D S S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAED-SFNSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVRKEQATKLAQEHGIRFFETSAKSSVNVDEAFSCLAR 167
Query: 234 RALQRNGMER 243
L ++G R
Sbjct: 168 DILLKSGGRR 177
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 17/180 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++YDYL K +LVGDS VGK +LS RF R D ++S + +
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLS------RFTRNTFDLETKSTIG---------VEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +++++GK++K +WDT+GQ R+ I +Y RGA GIL+VYDI +F ID+WLKE+
Sbjct: 51 TRSMMIEGKKIKATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKEL 110
Query: 174 EEHAP--GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T+EA +YA +N M+F E S L N+ E+ L
Sbjct: 111 RNHADESNISIMLVGNKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNL 170
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCLLF------RFS----DDTFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L+GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDIT + +FD I +WL+ +
Sbjct: 48 IKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+L+GN+ + R + E A +N + F E S + N+ ++F L+
Sbjct: 108 QEHANEDVEKMLLGNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 ADILKK 173
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LD KR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDQKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+L+GN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 16/190 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
Query: 235 ALQRNGMERL 244
Q + L
Sbjct: 169 IKQSMSQQNL 178
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVNKILIGNKCDWEEKRAVSTEQGQQLANELNIPFMEVSAKSNINVEKAFF 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LD KR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDQKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+L+GN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILIGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ ESF TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTE 171
Query: 231 LSRRALQRNGMERLWRSNKVG 251
+ R Q+ +R + G
Sbjct: 172 IYRIVSQKQMADRAAHEDSPG 192
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSNNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+ VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 QNVEQHATEGVNKILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ YA KNQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNI 168
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVDLDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQ 168
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ ESF TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTE 171
Query: 231 LSRRALQRNGMERLWRSNKVG 251
+ R Q+ +R + G
Sbjct: 172 IYRIVSQKQMADRAAHEDSPG 192
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 16/191 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P ++ YD+L+K LL+GDS VGK +L RF D + + F + G
Sbjct: 4 PPSRSRGDYDHLIKLLLIGDSGVGKSCLLL------RFS----DDTFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W++ +E+HA V K+LVGN++ + R V+T + + A + + FFE S + N+ +
Sbjct: 109 WIRNIEQHASDNVNKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQV 168
Query: 228 FTELSRRALQR 238
F ++R QR
Sbjct: 169 FFTMARDIKQR 179
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VTT + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 NLA 168
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDI+N SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILKK 173
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSYIDTYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L ++ V T EA+ +A ++F E S N+ E+F +S
Sbjct: 109 YASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMS-- 166
Query: 235 ALQRNGMERLWRSNKVGRKPLINF 258
+ +R+ V RKP ++
Sbjct: 167 ---SDIKKRMATQPAVERKPTVHI 187
>gi|871514|emb|CAA90079.1| small G protein [Pisum sativum]
Length = 215
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GD VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDRRVGKSCLLL------RFS----DGSFTTSFIATIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKPIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ E F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|347965503|ref|XP_321946.4| AGAP001211-PA [Anopheles gambiae str. PEST]
gi|333470481|gb|EAA01802.5| AGAP001211-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT E A++ + F E S N+ ++F L+R
Sbjct: 108 ENAAADVEKMLLGNKCELNEKRQVTRVRGEQLAVEYGIKFMETSAKASINVDDAFFTLAR 167
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 112/183 (61%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+D+L+K LL+GDS VGK S L L RF D + + F + G + +K T
Sbjct: 12 FDHLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG-----IDFKVRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+H
Sbjct: 57 VELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH 116
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+LVGN++ + R V+T + + A + M FFE S + N+ + F ++R
Sbjct: 117 ASDNVNKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDI 176
Query: 236 LQR 238
QR
Sbjct: 177 KQR 179
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRHI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 113/190 (59%), Gaps = 18/190 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCIL---------VRFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SFD I W++ +E
Sbjct: 48 RTVDIEGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+++GN+ L +R V+ ++ A ++Q+ F E S N+ +F L++
Sbjct: 108 ENAAADVEKMILGNKCDLEESRVVSRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAK 167
Query: 234 RALQRNGMER 243
+N M+R
Sbjct: 168 DI--KNKMDR 175
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLTDKRVVEYDVAKEFADANKMPFLETSALNSTNVEEAFLTMARQ 168
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 114/187 (60%), Gaps = 16/187 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFN-NTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNG 240
L ++G
Sbjct: 168 DILLKSG 174
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|58265066|ref|XP_569689.1| Rab/GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134109357|ref|XP_776793.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259473|gb|EAL22146.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225921|gb|AAW42382.1| Rab/GTPase, putative [Cryptococcus neoformans var. neoformans
JEC21]
gi|304569874|gb|ADM45310.1| Sav1 [Cryptococcus neoformans]
gi|405119103|gb|AFR93876.1| rab/GTPase [Cryptococcus neoformans var. grubii H99]
Length = 211
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 7 QHYDFLIKLLLIGDSGVGKSCLL---------LRFCEDSWTPS-FITTIG-----IDFKI 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I WL +E
Sbjct: 52 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIE 111
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA PGV K+L+GN+ R+VT + A + + F E S + + E+F L+R
Sbjct: 112 QHASPGVNKILIGNKCDWEEKRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLAR 171
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 18/190 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK IL RF DGS F S G + +K
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILF------RFSDNKFDGS----FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
I +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T + +F+ I W++ +
Sbjct: 48 RIIEIDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIKTWIRNTD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+++ + F E S + N+ ++F L+R
Sbjct: 108 EHAAADVEKMILGNKCDMNDLRQVSRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLAR 167
Query: 234 RALQRNGMER 243
++ MER
Sbjct: 168 DIKEK--MER 175
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ A +YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ +F+ + +W
Sbjct: 46 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQW 105
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L+E++ +A V K+LVGN+ L R V T+ A+ YA + + F E S N+ ++F
Sbjct: 106 LQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
Query: 229 TELSRRALQRNG 240
++ R G
Sbjct: 166 LTMASEIKSRMG 177
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GD VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDXGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DNSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V T + + A + + FFE S + N+ + F ++R
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVEDVFFTIAR 175
Query: 234 RALQR 238
QR
Sbjct: 176 DIKQR 180
>gi|321254029|ref|XP_003192938.1| rab/GTPase [Cryptococcus gattii WM276]
gi|317459407|gb|ADV21151.1| Rab/GTPase, putative [Cryptococcus gattii WM276]
Length = 211
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 7 QHYDFLIKLLLIGDSGVGKSCLL---------LRFCEDSWTPS-FITTIG-----IDFKI 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I WL +E
Sbjct: 52 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIE 111
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA PGV K+L+GN+ R+VT + A + + F E S + + E+F L+R
Sbjct: 112 QHASPGVNKILIGNKCDWEEKRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLAR 171
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+
Sbjct: 108 ENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 166
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+
Sbjct: 108 ENAAADVEKMLLGNKCELNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 166
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ A +YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ +F+ + +W
Sbjct: 46 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQW 105
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L+E++ +A V K+LVGN+ L R V T+ A+ YA + + F E S N+ ++F
Sbjct: 106 LQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
Query: 229 TELSRRALQRNG 240
++ R G
Sbjct: 166 LTMASEIKSRMG 177
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 20/197 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 3 ARDDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLK
Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLK 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F
Sbjct: 108 ELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKN 167
Query: 229 --TELSRRALQRNGMER 243
TE+ R Q+ +R
Sbjct: 168 ILTEIYRIVSQKQIADR 184
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 118/196 (60%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVQRLLLGNKCDMEAKRRVRKEQADQLAREHGIRFFETSAKSSTNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R S++
Sbjct: 168 DILLKSGGRRSGNSHR 183
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
QYDYL K LL+GDS VGK +L RF +D S + + G + +K
Sbjct: 12 QYDYLFKILLIGDSGVGKSCLLL---------RF-VDDSHRESYQTTIG-----VDFKIK 56
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGK VKLQ+WDT+GQ RF TI SY RGA G+++VYDIT + S++ + +WL EVE
Sbjct: 57 TMRVDGKVVKLQIWDTAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVET 116
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A GV +LVGN++ L +R V A+ +A + M F E S N++E+F LSR
Sbjct: 117 YASEGVHMILVGNKIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSR 175
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 19/206 (9%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPL 255
+L+ + GM+ +S +VG + +
Sbjct: 166 DLASDI--KKGMDTS-KSEQVGSQGV 188
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCLLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN +FD I +WL+ +
Sbjct: 48 IKTVELGGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V + E A ++ + F E S + N+ ++F +L+
Sbjct: 108 DEHANEDVEKMILGNKCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLA 167
Query: 233 RRALQR 238
+ L +
Sbjct: 168 QAILNK 173
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDLK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ + YD+L+K LL+GDS VGK L +S P F + G + +
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----IDF 47
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W +
Sbjct: 48 KIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFQN 107
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F L
Sbjct: 108 VEQHATEGVNKILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSL 167
Query: 232 SRRALQR 238
+ +R
Sbjct: 168 AADIKKR 174
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCLLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN +F+ I +WL+ +
Sbjct: 48 IKTVELGGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V+ E A ++++ F E S + N+ ++F +L+
Sbjct: 108 DEHANEDVEKMILGNKCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLA 167
Query: 233 RRALQR 238
+ L +
Sbjct: 168 QAILNK 173
>gi|346976474|gb|EGY19926.1| GTP-binding protein SAS1 [Verticillium dahliae VdLs.17]
Length = 208
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEDKRVVSTEQGQQLADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ + YD+L+K LL+GDS VGK L +S P F + G + +
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----IDF 47
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W +
Sbjct: 48 KIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIRTWFQN 107
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F L
Sbjct: 108 VEQHATEGVNKILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSL 167
Query: 232 SRRALQR 238
+ +R
Sbjct: 168 AADIKKR 174
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+
Sbjct: 108 ENASADVEKMLLGNKCELHDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 166
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VTT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 19/206 (9%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPL 255
+L+ + GM+ +S +VG + +
Sbjct: 166 DLASDI--KKGMDTS-KSEQVGSQGV 188
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+
Sbjct: 108 ENASADVEKMLLGNKCELNDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 166
>gi|126282597|ref|XP_001369645.1| PREDICTED: ras-related protein Rab-15-like [Monodelphis domestica]
Length = 212
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M FFE S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGKEQGQQLAKEYGMDFFETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHKKE 176
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 2 AMNPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VD 46
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ +F+ + +WL+
Sbjct: 47 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQ 106
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A V K+LVGN+ L R V T+ A+ YA + + F E S N+ ++F
Sbjct: 107 EIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLT 166
Query: 231 LSRRALQRNG 240
++ R G
Sbjct: 167 MASEIKSRMG 176
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 16/196 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D + + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------IRFAEDNFNNT-YISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+L YDIT++ SF+ I W+K +
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIM 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV +L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 117/207 (56%), Gaps = 18/207 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
++ + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 3 SSNRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----ID 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 48 FKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFA 107
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
VE+HA GV K+L+GN+ R V+T + A + + F EVS + NI ++F
Sbjct: 108 NVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELNIPFLEVSAKTNNNIDKAFYS 167
Query: 231 LSRRALQRNGMERLWRSNKVGRKPLIN 257
L+ +R + + ++ G P +N
Sbjct: 168 LAADIKKR--IIDTSKPDQAGSGPAVN 192
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 16/188 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +QYD+L+K LL+GDS VGK +L RF D S + F + G +
Sbjct: 3 AVNQQYDHLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----ID 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILL YD+T++ SF+ + W++
Sbjct: 48 FKIRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMR 107
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+E+HA V K+LVGN+ + R ++ + A + + FFE S + + ++F
Sbjct: 108 NIEQHASENVNKILVGNKCDMEDKRVISHARGKALADEFGIPFFETSAKANVKVEDAFFS 167
Query: 231 LSRRALQR 238
++R R
Sbjct: 168 IARDIKNR 175
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ LA + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLADKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|112982896|ref|NP_001037576.1| small GTP binding protein RAB8 [Bombyx mori]
gi|95102574|gb|ABF51225.1| small GTP binding protein RAB8 [Bombyx mori]
gi|102993217|gb|ABF71468.1| ras-related GTP-binding protein Rab8 [Bombyx mori]
Length = 210
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KTYDCLFKLLLIGDSGVGKTSILF---------RFSEDAFNIS-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK+VKLQ+WDT+GQ RF TI +Y RG+ GI+LVYD+TN+ SF+ I W++ +E
Sbjct: 48 RTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+++GN+ L R V+ E AI+ Q+ F E S N+ +F L+R
Sbjct: 108 ENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 167
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 17/181 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YDYL K +++GDS GK +L RF + SES + S G + +K
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLL---------LRFADNTYSES-YMSTIG-----VDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI-DRWLKEV 173
T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TNK SFD I + WL+++
Sbjct: 47 KTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDI 106
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+++A V K+L+GN++ L +R V EA+ A +N M + E S D N+ ++FT ++
Sbjct: 107 DKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIA 166
Query: 233 R 233
+
Sbjct: 167 K 167
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ LA + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLADKKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 117/206 (56%), Gaps = 19/206 (9%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPL 255
L+ + + GM+ +S +VG + +
Sbjct: 166 SLA--SAIKKGMDTS-KSEQVGSQGV 188
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLATDIKKR 174
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + +I ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+A V K+L+GN+ L R V+ E A++ + F E S N+ E+F L+
Sbjct: 108 ENAAADVEKMLLGNKCELNDKRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFLTLA 166
>gi|395504097|ref|XP_003756395.1| PREDICTED: ras-related protein Rab-15 [Sarcophilus harrisii]
Length = 212
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M FFE S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFFETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHKKE 176
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 18/193 (9%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELSRRALQRNGME 242
L+ + GM+
Sbjct: 166 NLASEI--KKGMD 176
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
++ YD+L+K LL+GDS VGK +L RF D + + F + G + +
Sbjct: 8 SRGDYDHLIKLLLIGDSGVGKSCLLL------RFS----DDTFTTSFITTIG-----IDF 52
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ LDG+RVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++
Sbjct: 53 KVRTVELDGRRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN 112
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+E+HA V K+LVGN++ + R V+T + + A + + FFE S + N+ + F +
Sbjct: 113 IEQHASDNVNKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFSI 172
Query: 232 SRRALQR 238
+R QR
Sbjct: 173 ARDIKQR 179
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ +YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 4 SDDEYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEF 48
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T ++ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ K SF G+++WLKE
Sbjct: 49 ATKSVQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKE 108
Query: 173 VEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+ +HA + +LVGN+ L R V+T E + +A K+ ++F E S L N+ ++FT+L
Sbjct: 109 LRDHADSNIVIMLVGNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQL 168
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRVVSTEKGQQLADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNI 168
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLASDIKKR 174
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 109/187 (58%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ + YD+L+K LL+GDS VGK L RF D + S F + G + +
Sbjct: 5 SNRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----IDF 49
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W +
Sbjct: 50 KIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIRTWFQN 109
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F L
Sbjct: 110 VEQHATEGVNKILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSL 169
Query: 232 SRRALQR 238
+ +R
Sbjct: 170 AADIKKR 176
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
EHA V ++++GN+ + R V+ E AI + F E S N+ E+
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 110/179 (61%), Gaps = 17/179 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K LL+GDS VGK +L RF + SE+ + S G + +K T
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLL---------IRFADESFSET-YISTIG-----VDFKIRT 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGK VKLQ+WDT+GQ RF TI SY RGAQGI++VY +T+K SF + WL+E+E +
Sbjct: 50 IDLDGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKSWLQEIEHY 108
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V ++LVGN+ L +R V T +A +A ++QM F E S N+ ++F E++R+
Sbjct: 109 ANSTVNRLLVGNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQ 167
>gi|225717530|gb|ACO14611.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL + LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFRLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ F TI +Y RGA GI+LVYD+TN+ SF I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQECFRTITTAYYRGAMGIMLVYDLTNEKSFYNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R VT + E AI+ + F E S N+ E+F L+R
Sbjct: 108 EHASSDVEKMILGNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLAR 167
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMERLWRSNKVG 251
+ R QR +R + G
Sbjct: 172 IYRIVSQRQIADRSAHDDSPG 192
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLL---------LRFSEDSFTPS-FITTIG-----IDFKI 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILL+YD+T+K SFD + W VE
Sbjct: 49 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVE 108
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA V K+L+GN+ R V+ + + A + + F E S + N+ E+F L+R
Sbjct: 109 QHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAR 168
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
EHA V ++++GN+ + R V+ E AI + F E S N+ E+
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEN 161
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + +I ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VKLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E++
Sbjct: 49 TVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA NR V T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMS 166
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA + ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDMERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S + + T +
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATRS 77
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +H
Sbjct: 78 IQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDH 137
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
A + +LVGN+ L R V T EA+ YA KNQ++F E S L N+ +FT +
Sbjct: 138 ADQNIVIMLVGNKSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNI 193
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VTT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 19/189 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D F S G + +K
Sbjct: 3 KCYDYLFKLLLIGDSGVGKTSILL------RFS----DNLFNQTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ ++
Sbjct: 48 RTVDIDGKKIKLQIWDTAGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIKTWMQNID 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS- 232
EHA V K+L+GN+ + R ++ ++ A + + F E S + NI E+F L+
Sbjct: 108 EHANNDVEKMLLGNKCDVDEKRQISFQQGLQLANSHNILFMETSAKSNINITEAFEALAT 167
Query: 233 --RRALQRN 239
+ ++RN
Sbjct: 168 GIKVKMERN 176
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 16/193 (8%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
T P YDYL+K LL+GDS VGK +L RF D + S F + G
Sbjct: 2 TSPATNKSAAYDYLIKLLLIGDSGVGKSCLL---------LRFSEDSFTPS-FITTIG-- 49
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+ +K TI L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I
Sbjct: 50 ---IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNI 106
Query: 167 DRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
W++ +E+HA V K+L+GN+ +A + V + + A + + F E S N+
Sbjct: 107 RNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVE 166
Query: 226 ESFTELSRRALQR 238
E+F L++ +R
Sbjct: 167 EAFISLAKDIKKR 179
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+ + WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNSVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ + R V A+ +A +N+M F E S L N+ E+F ++R+
Sbjct: 109 YATSTVLKLLVGNKSDMTDKRVVEYDVAKEFAEQNKMPFLETSALDSTNVEEAFLTMARQ 168
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
Length = 207
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFF 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 61
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 62 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 121
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 122 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 181
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VTT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 107/183 (58%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 NLA 168
>gi|38454238|ref|NP_942044.1| ras-related protein Rab-15 [Rattus norvegicus]
gi|464561|sp|P35289.1|RAB15_RAT RecName: Full=Ras-related protein Rab-15
gi|206537|gb|AAA41995.1| RAB15 [Rattus norvegicus]
gi|63102340|gb|AAH94954.1| RAB15, member RAS oncogene family [Rattus norvegicus]
gi|149051505|gb|EDM03678.1| rCG61451, isoform CRA_b [Rattus norvegicus]
Length = 212
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME----RLWRSNKVGRKPLINFESFTE 263
LQ + E R SN++ L E TE
Sbjct: 168 LVLQAHRKELDGLRTCASNELALAELEEDEGKTE 201
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELGIPFMEVSAKSNINVEKAFF 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DNTYTQDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQ 168
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KETYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQIAER 184
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 18/190 (9%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A++K YD+L+K LL+GDS VGK +L RF D + + + G +
Sbjct: 7 ASEKNYDHLIKLLLIGDSGVGKSSLLL------RFS----DSYFTTSYITTLG-----ID 51
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YK I LDGK++ LQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++
Sbjct: 52 YKNRAIELDGKKIMLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIR 111
Query: 172 EVEEHAPG--VPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+E+H+ V K+LVGN++ + R V + + A K + FFE S + N+ E+F
Sbjct: 112 SIEQHSSDNIVNKILVGNKVDMDESKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAF 171
Query: 229 TELSRRALQR 238
++R QR
Sbjct: 172 FSIARDIKQR 181
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VKLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E++
Sbjct: 49 TVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA NR V T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVRKLLVGNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMS 166
>gi|148704501|gb|EDL36448.1| RAB15, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 215
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
V A KQYD L + LL+GDS VGK +L RF D S S G
Sbjct: 1 VPAMAKQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W
Sbjct: 46 VDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKW 105
Query: 170 LKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+ +V+E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESF
Sbjct: 106 VSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 165
Query: 229 TELSRRALQRNGME 242
T L+ LQ + E
Sbjct: 166 TRLTELVLQAHRKE 179
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MVNNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+ VE+HA GV ++L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 QNVEQHATEGVNRILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 18/193 (9%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELSRRALQRNGME 242
L+ + GM+
Sbjct: 166 NLASEI--KKGMD 176
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL---------FRFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
EHA V ++++GN+ + R V+ E AI + F E S N+ E+
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEN 161
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLL---------LRFSEDSFTPS-FITTIG-----IDFKI 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILL+YD+T++ SF+ I W VE
Sbjct: 49 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRTWFSNVE 108
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA V K+L+GN+ R VT + + A + + F E S + N+ E+F L+R
Sbjct: 109 QHASENVFKILIGNKCDCEEQRQVTYEQGQALAEELGIKFLEASAKTNVNVDEAFFTLAR 168
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 107/189 (56%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLASDIKKR 174
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQIAER 184
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K +L+GDS VGK +L RF D + C+ + D +K T
Sbjct: 12 YDYLIKLMLIGDSGVGKSSLLL------RFSDDSFDMN-----CTPTIGID----FKLRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGK++KLQL DT+GQ RF TI ++ R A GILLVYDITN+ SF I+ WLK +E+H
Sbjct: 57 IELDGKKIKLQLLDTAGQERFKTITTAHYRNAMGILLVYDITNEQSFKNIEEWLKNIEKH 116
Query: 177 -APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
+ V K+L+GN+ L R V+T E A + MAF+E S + E+F L+R
Sbjct: 117 TSQPVNKILIGNKTDLGAQRKVSTEEGRKLAEQLNMAFYETSAKDKSMVDEAFFALTRDI 176
Query: 236 LQRNG 240
+R G
Sbjct: 177 KKRLG 181
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 105/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++GK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E++
Sbjct: 49 TIEMEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA +RTV T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVCKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMS 166
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 14 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 58
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 59 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 118
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 119 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 178
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 179 IYRIVSQKQIADR 191
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKMIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IHRIVSQKQIADR 184
>gi|432094470|gb|ELK26033.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 207
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 102/180 (56%), Gaps = 16/180 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSED-TFNSSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+W+T GQ RF TI +Y RGA G +LVYDITN+ SFD I W + +E
Sbjct: 48 RTIELDGKRIKLQIWNTVGQDRFRTITTAYYRGAIGNMLVYDITNERSFDNIRNWTRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 1 MAATPARA-RADYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTASFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W++ +E+HA V K+LVGN+ + + + T + + A + + FFE +
Sbjct: 105 NIRNWIRNIEQHASDNVNKILVGNKADMDESKKALPTSKGQALADEYGIPFFETGAKTNL 164
Query: 223 NIRESFTELSRRALQR 238
N+ + F +++ QR
Sbjct: 165 NVEQVFFSIAKDIKQR 180
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL + E +F S F S G + +K
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCILF-RFSEDQF---------NSTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SFD I W++ +E
Sbjct: 48 KTIELDDKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
++A V ++++GN+ + R V+T + E A + + FFE S ++ E+F ++R
Sbjct: 108 QNASSDVERMILGNKCDMEDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMAR 167
Query: 234 RALQR 238
Q+
Sbjct: 168 SIKQK 172
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATH 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 53
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + W++E+++
Sbjct: 54 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDK 113
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A V K+LVGN+ L + VT E + A + ++F E S N+ ++F E+SR
Sbjct: 114 YATENVSKLLVGNKSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSR 172
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQISDR 184
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++ + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MSNNRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 17/184 (9%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ A + YDYL K +L+GDS VGK +LS RF R + S+S
Sbjct: 1 MAAKDEYYDYLYKIVLIGDSGVGKSNMLS------RFTRDEFNLESKSTIG--------- 45
Query: 110 LAYKTTTILLD-GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ + T ++ LD GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT + SF+ ++R
Sbjct: 46 VEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVER 105
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
WLKE+ +HA P + +LVGN+ L R V+ EA +A + +AF E S L N+ ++
Sbjct: 106 WLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQA 165
Query: 228 FTEL 231
F ++
Sbjct: 166 FHQI 169
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VKLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E++
Sbjct: 49 TVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V VLVGN+ LA NR V T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVRNVLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMS 166
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 26/223 (11%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 6 EDEYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I+ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +F+ ++RWLKE+
Sbjct: 51 TKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKEL 110
Query: 174 EEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
+HA + LVGN+ L R V+T EA +A KN +AF E S L + +F
Sbjct: 111 RDHADANTVIMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRIL 170
Query: 229 TE----LSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRR 267
TE +SR+ +Q E S G I E+ TE ++
Sbjct: 171 TEIYKLMSRKTIQ--AEENASASLPTGNSIAITAENTTESQKK 211
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 20/197 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 3 ARDDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLK
Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLK 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F
Sbjct: 108 ELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKS 167
Query: 229 --TELSRRALQRNGMER 243
TE+ R Q+ +R
Sbjct: 168 ILTEIYRIVSQKQISDR 184
>gi|256084393|ref|XP_002578414.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
Length = 355
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYLLK LL+GDS VGK +L RF D + + S G + +K TI
Sbjct: 162 DYLLKLLLIGDSGVGKSCLLL------RFA----DETFNETYISTIG-----VDFKIRTI 206
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
L+GK VKLQ+WDT+GQ RF TI SY RGAQGI++VYDIT++ +F + WL E+ +A
Sbjct: 207 DLNGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYA 266
Query: 178 PG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V ++LVGN+ LA R V T A+ +A KNQM+F E S N+ +F +++ + +
Sbjct: 267 NSTVSRLLVGNKCDLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEK-I 325
Query: 237 QRNG 240
Q N
Sbjct: 326 QENA 329
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSDIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 6 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 50
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 51 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 110
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 111 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 167
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+++ + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MSSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKTNTNIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 113/190 (59%), Gaps = 16/190 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
AT ++YDYL K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 13 ATARRYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VD 57
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+
Sbjct: 58 FKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQ 117
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F
Sbjct: 118 EIDRYATEGVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLT 177
Query: 231 LSRRALQRNG 240
++R+ +R G
Sbjct: 178 MARQIKERMG 187
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLL---------RFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLV+D+T++ SF+ + W +E+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA GV K+L+GN+ R VTT + E A + + + E S + N+ E+F L+R
Sbjct: 110 HASEGVSKILIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLARE 169
Query: 235 ALQR 238
R
Sbjct: 170 VKTR 173
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVSTEQGQKLADELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 24/195 (12%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ +YDYL K +L+GD+ VGK +LS RF R S+S + +
Sbjct: 4 SDDEYDYLFKVVLIGDAGVGKSNLLS------RFTRNEFSLESKSTIG---------VEF 48
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T +I +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT K SFD + RWLKE
Sbjct: 49 ATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKE 108
Query: 173 VEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++HA + +LVGN+ L + VTT +A +A N ++F E S L + N+ E+F +
Sbjct: 109 LKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSI 168
Query: 232 --------SRRALQR 238
S++AL++
Sbjct: 169 LSEIYRLGSKKALEK 183
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 16/171 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF---------RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMVLGNKCDINDKRQVSKDRGEKLALDYGIKFMETSAKANINV 158
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 104/183 (56%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R ++T + A + + F EVS NI ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRVISTERGQQLADELGIPFLEVSAKSGINIDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 NLA 168
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLL---------RFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLV+D+T++ SF+ + W +E+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA GV K+L+GN+ R VTT + E A + + + E S + N+ E+F L+R
Sbjct: 110 HASEGVSKILIGNKSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLARE 169
Query: 235 ALQR 238
R
Sbjct: 170 VKTR 173
>gi|118356223|ref|XP_001011370.1| Ras family protein [Tetrahymena thermophila]
gi|89293137|gb|EAR91125.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777752|dbj|BAJ21272.1| Rab-family small GTPase Rab1E [Tetrahymena thermophila]
Length = 250
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 17/186 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL+K +++G+S VGK +L RF D SES + + ++
Sbjct: 4 REYDYLIKLVIIGNSSVGKSSVL---------LRFSDDQFSESYLTTIG------VDFRF 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR-WLKEV 173
T+ +DG++VKLQ+WDT+GQ RF TI +Y +GA GI+LVYDITN SF+ I+R WL EV
Sbjct: 49 KTLNIDGRKVKLQIWDTAGQERFRTITNAYYKGADGIVLVYDITNSTSFEDIERFWLNEV 108
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E +A V +L+GN+ L+ R V T YA K M F+E S I ++F +S
Sbjct: 109 ESYAEKDVELLLLGNKSDLSDQRQVETNMVSEYAEKKHMDFYETSAKTSDQIEQAFLSIS 168
Query: 233 RRALQR 238
+R + +
Sbjct: 169 KRLMSK 174
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQIAER 184
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 104/186 (55%), Gaps = 24/186 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
Q++YDYL K LL+G+S VGK +L ++ ES P +D
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVD----------------- 46
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+K T L+GK VKLQ+WDT+GQ RF TI SY +GA GI+LVYD+T+K SF ++ W
Sbjct: 47 --FKIRTFDLNGKTVKLQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENW 104
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L EVE++A V +VLVGN++ L R VT+ E + A + F E S N+ ++F
Sbjct: 105 LAEVEKYANENVVRVLVGNKVDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAF 164
Query: 229 TELSRR 234
L+
Sbjct: 165 ITLANE 170
>gi|157136703|ref|XP_001656883.1| ras-related protein Rab, putative [Aedes aegypti]
gi|94469070|gb|ABF18384.1| RAB protein [Aedes aegypti]
gi|108869891|gb|EAT34116.1| AAEL013620-PA [Aedes aegypti]
Length = 203
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 19/185 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
++YD+L K L++GDS VGK +L RF S++ F SG Y + +
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLL---------IRF-----SDNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T++++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL+E
Sbjct: 46 KIRTVVINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+E + V KVLVGN+ + V T +A+ +A + + FE S + N+ E F ++
Sbjct: 106 IEANCDVVNKVLVGNKNDDPARKVVITEDAQRFANQMDIQLFETSAKDNINVEEMFLAIT 165
Query: 233 RRALQ 237
+ L+
Sbjct: 166 EQVLR 170
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 21/194 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK L RF D +S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFL---------LRFADDAYVDS-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E+++
Sbjct: 49 TVEIDGKTIKLQIWDTAGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQWLSEIDK 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR- 233
+A V K+LVGN+ LA +R V T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVCKLLVGNKCDLAESRVVDTSVAQAYADEIGIPFLETSAKDSINVEEAFLAMSEA 168
Query: 234 ----RALQRNGMER 243
+A + +ER
Sbjct: 169 IKKSKAGSQGALER 182
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 105/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++GK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E++
Sbjct: 49 TIEMEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA +RTV T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDTVCKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMS 166
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 26/223 (11%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 6 EDEYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I+ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +F+ ++RWLKE+
Sbjct: 51 TKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKEL 110
Query: 174 EEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
+HA + LVGN+ L R V+T EA +A KN +AF E S L + +F
Sbjct: 111 RDHADANTVIMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRIL 170
Query: 229 TE----LSRRALQRNGMERLWRSNKVGRKPLINFESFTELSRR 267
TE +SR+ +Q E S G I E+ TE ++
Sbjct: 171 TEIYKLMSRKTIQ--AEENATASLPTGNSIAITAENTTESQKK 211
>gi|403264421|ref|XP_003924482.1| PREDICTED: ras-related protein Rab-15 [Saimiri boliviensis
boliviensis]
Length = 212
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 113/194 (58%), Gaps = 16/194 (8%)
Query: 48 KPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYD 107
+ VVA YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 3 ETVVAAGGLYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG--- 49
Query: 108 DMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGID 167
+ +K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ +
Sbjct: 50 --VDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVK 107
Query: 168 RWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
+WL+E++ +A GV K+LVGN+ +A + V A+ +A + F E S N+ +
Sbjct: 108 QWLQEIDRYATEGVNKLLVGNKSDMADKKVVEYTMAKEFADSLGIPFLETSAKNASNVEQ 167
Query: 227 SFTELSRRALQRNG 240
+F ++R+ +R G
Sbjct: 168 AFLTMARQIKERMG 181
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|15242773|ref|NP_195972.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|75181251|sp|Q9LZD4.1|RAE1D_ARATH RecName: Full=Ras-related protein RABE1d; Short=AtRABE1d; AltName:
Full=Ras-related protein Rab8C; Short=AtRab8C
gi|7378637|emb|CAB83313.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|14334902|gb|AAK59629.1| unknown protein [Arabidopsis thaliana]
gi|15810625|gb|AAL07200.1| unknown protein [Arabidopsis thaliana]
gi|332003234|gb|AED90617.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 216
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK +L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNL 164
Query: 223 NIRESFTELSRRALQR 238
N+ F +++ QR
Sbjct: 165 NVENVFMSIAKDIKQR 180
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 113/198 (57%), Gaps = 20/198 (10%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+ T +YDYL K LL+GDS VGK +L RF D S + S G +
Sbjct: 1 MTTSIEYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSYVDTYISTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ I +WL
Sbjct: 46 DFKIRTIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWL 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF- 228
E++ +A V K+LVGN+ L ++ V T +A+ +A + F E S N+ E+F
Sbjct: 106 SEIDRYASDNVCKLLVGNKCDLVDSKVVDTEKAKDFADSLGIPFIETSAKESINVEEAFL 165
Query: 229 ---TELSRRALQRNGMER 243
+E+ +R + +ER
Sbjct: 166 TMSSEIKKRMATQPTVER 183
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 17/184 (9%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ A + YDYL K +L+GDS VGK +LS RF R + S+S
Sbjct: 1 MAAKDEYYDYLYKIVLIGDSGVGKSNMLS------RFTRDEFNLESKSTIG--------- 45
Query: 110 LAYKTTTILLD-GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ + T ++ LD GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT + SF+ ++R
Sbjct: 46 VEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVER 105
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
WLKE+ +HA P + +LVGN+ L R V+ EA +A + +AF E S L N+ ++
Sbjct: 106 WLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQA 165
Query: 228 FTEL 231
F ++
Sbjct: 166 FHQI 169
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 20/197 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 3 ARDDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RG G LLVYDI +++ ++RWLK
Sbjct: 48 FATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLK 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F
Sbjct: 108 ELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKN 167
Query: 229 --TELSRRALQRNGMER 243
TE+ R Q+ +R
Sbjct: 168 ILTEIYRIVSQKQIADR 184
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQIAER 184
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLA 167
Query: 233 RRALQR 238
+ L++
Sbjct: 168 QDILRK 173
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLASDIKKR 174
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 27/208 (12%)
Query: 56 QYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+YDYL K LL+GDS VGK +L YLES +D
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVD------------------- 44
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL
Sbjct: 45 FKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLS 104
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A GV K+LVGN+ L NR V+ A+ +A + + F E S N+ ++F
Sbjct: 105 EIDRYASDGVNKILVGNKSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMA 164
Query: 231 LSRRALQRNGMERLWRSNKVGRKPLINF 258
++ R + +N + P +N
Sbjct: 165 MTSAIKNRMASQ---PANNSAKPPTVNI 189
>gi|402876447|ref|XP_003901979.1| PREDICTED: ras-related protein Rab-15 [Papio anubis]
gi|426377184|ref|XP_004055353.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Gorilla gorilla
gorilla]
Length = 212
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|397507196|ref|XP_003824091.1| PREDICTED: ras-related protein Rab-15 isoform 1 [Pan paniscus]
gi|27734452|sp|P59190.1|RAB15_HUMAN RecName: Full=Ras-related protein Rab-15
gi|119601301|gb|EAW80895.1| RAB15, member RAS onocogene family, isoform CRA_c [Homo sapiens]
gi|355390223|dbj|BAL14290.1| Ras-related protein Rab-15 isoform CN [Homo sapiens]
Length = 212
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLL---------RFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLV+D+T++ SF+ + W +E+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA GV K+L+GN+ R VTT + E A + + + E S + N+ E+F L+R
Sbjct: 110 HASEGVSKILIGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLARE 169
Query: 235 ALQR 238
R
Sbjct: 170 VKTR 173
>gi|390469209|ref|XP_003734069.1| PREDICTED: ras-related protein Rab-15-like [Callithrix jacchus]
Length = 212
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative [Tribolium
castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 27/212 (12%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+L K L++GDS VGK +L RF D + + + G + +K
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL------RFA----DNTFSGSYITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ LDG++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL E+E
Sbjct: 48 KTVSLDGQKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + FE S + N+ E F ++R
Sbjct: 108 QNCDVVNRVLVGNKNDTPDRKVVLTEDAQRFADTMNIQLFETSAKDNVNVEEMFMAITRL 167
Query: 235 ALQ------------RNGMERLWRSNKVGRKP 254
L+ +N L +SNK G+K
Sbjct: 168 VLRSKQEMKERQNITQNETVNLRKSNKQGKKK 199
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|242018600|ref|XP_002429762.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514774|gb|EEB17024.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 210
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 14/180 (7%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL + +++ + F +G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKT-ILFMIGIKTTSVNLLI-------FLVVAG-----IDFKV 49
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 50 RTIDVDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 109
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R VT + E AI+ + F E S +++++F L+R
Sbjct: 110 ENASADVEKMLLGNKCELEEKRQVTKEKGEQLAIEYGIKFIETSAKASIHVQDAFYMLAR 169
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 108/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LD K +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+K SF+ + +WL E++
Sbjct: 49 TIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R VTT EA+ +A + F E S N+ ++F ++ +
Sbjct: 109 YACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQ 168
Query: 235 ALQR 238
R
Sbjct: 169 IKSR 172
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDRESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 IATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVPQKQIADR 184
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLL---------LRFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W VE+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITVAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA GV K+L+GN+ R V+T++ + A + + F E S + N+ E+F L+R
Sbjct: 110 HASEGVNKILIGNKCDWDDKRAVSTQQGQELADELGVRFLETSAKQNINVEEAFFSLAR 168
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 103/172 (59%), Gaps = 16/172 (9%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK +L RF D +ES + S G + +K TI
Sbjct: 34 DYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRTI 78
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + W+ E++++A
Sbjct: 79 DLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYA 138
Query: 178 -PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
GV K+LVGN+ L RTVT E + +A M F E S N+ ++F
Sbjct: 139 MEGVSKLLVGNKCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAF 190
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|353230109|emb|CCD76280.1| putative rab15, 13, 10, 1, 35, 5, and [Schistosoma mansoni]
Length = 218
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYLLK LL+GDS VGK +L RF D + + S G + +K TI
Sbjct: 25 DYLLKLLLIGDSGVGKSCLLL------RFA----DETFNETYISTIG-----VDFKIRTI 69
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
L+GK VKLQ+WDT+GQ RF TI SY RGAQGI++VYDIT++ +F + WL E+ +A
Sbjct: 70 DLNGKVVKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYA 129
Query: 178 PG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V ++LVGN+ LA R V T A+ +A KNQM+F E S N+ +F +++ + +
Sbjct: 130 NSTVSRLLVGNKCDLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEK-I 188
Query: 237 QRNG 240
Q N
Sbjct: 189 QENA 192
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 17/197 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K LL+GDS VGK I+ RF D S + + S G + +K
Sbjct: 4 KYDFLFKLLLIGDSGVGKTSIIH---------RFTEDAFSPT-YISTIG-----IDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI + GKR+KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ SFD I +WL+ +E
Sbjct: 49 TIEVRGKRIKLQIWDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIEL 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA V K+L+ N+ + R V++ E A + + F E S + NI+++F +L+
Sbjct: 109 HASEDVQKILLANKCDVIERRAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEA 168
Query: 235 ALQR-NGMERLWRSNKV 250
L + G E++ ++ V
Sbjct: 169 ILNKVTGDEQVEKTATV 185
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 106/189 (56%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLAADIKKR 174
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + W+ E+++
Sbjct: 49 TIDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKNWMMEIDK 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+A GV K+LVGN+ L R V+ E + +A M F E S N+ ++F
Sbjct: 109 YAMEGVSKLLVGNKCDLTSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAF 162
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 21/206 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LLVGDS VGK +L RF D ES + S G + +K
Sbjct: 5 EYDYLFKVLLVGDSSVGKSCLL---------LRFTEDSYMES-YISTIG-----VDFKIK 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK +K Q+WDT+GQ RF T+ SY RGA GI++VYDIT+ SFD + WL E+E
Sbjct: 50 TVELDGKTIKFQIWDTAGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKHWLTEIER 109
Query: 176 H-APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+ + V +LVGN+ LA R V + A+ +A + F E S N+ ++F ++R
Sbjct: 110 YTSDNVNMILVGNKCDLAEKRAVEQQMAKAFANDVGIPFLETSAKDATNVEQAFLTMARE 169
Query: 235 ALQRNGMERLWRSNKVGR-----KPL 255
+R G + ++++G KPL
Sbjct: 170 IKKRVGGQTTSNNSQIGTVQMKGKPL 195
>gi|431904482|gb|ELK09865.1| Ras-related protein Rab-15 [Pteropus alecto]
Length = 212
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME----RLWRSNKVGRKPLINFESFTE 263
LQ + E R SN++ L ES E
Sbjct: 168 LVLQAHRKELDGVRTRASNEMALAELEEDESKPE 201
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDY+ K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYIFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDAYVDTYISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 50 TVELDGKSVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L ++ V T EA+ +A M F E S N+ +F +S
Sbjct: 110 YASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMS 167
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 54/268 (20%)
Query: 8 ATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVV--------------AT 53
A + +YDYL K +L+GDS VGK +LS + + +E+K + A
Sbjct: 3 AREDEYDYLFKVVLIGDSGVGKSNLLS--RFTRNEFNLESKSTIGVEFATRSIEVSTGAK 60
Query: 54 QKQYDYLLK------------------FLLVGDSDVGKQEILSGLYLESRFPRFWLDGSS 95
+ ++ +K F+L+GDS VGK +LS RF R + S
Sbjct: 61 NSRVEWPIKLHPHHPPHLLCGVTSELAFVLIGDSGVGKSNLLS------RFTRNEFNLES 114
Query: 96 ESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVY 155
+S + + T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVY
Sbjct: 115 KSTIG---------VEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 165
Query: 156 DITNKWSFDGIDRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFF 214
DI +++ ++RWL+E+ +HA + +LVGN+ L R+V T EA+++A +N ++F
Sbjct: 166 DIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFI 225
Query: 215 EVSPLCDFNIRESF----TELSRRALQR 238
E S L N+ +F TE+ R Q+
Sbjct: 226 ETSALDSTNVETAFQNILTEIYRIVSQK 253
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 20/189 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 6 EEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFAT 50
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ +DRWL+E+
Sbjct: 51 RSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELR 110
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----T 229
+HA + +LVGN+ L R V T EA+ +A +N ++F E S L N+ +F T
Sbjct: 111 DHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILT 170
Query: 230 ELSRRALQR 238
E+ R QR
Sbjct: 171 EIYRIVSQR 179
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 15/182 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L K L++GDS VGK +L RF D + + + G + +K
Sbjct: 3 HYDHLFKLLIIGDSGVGKSSLLL------RFA----DNTFSGNYITTIG-----VDFKIR 47
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL E+++
Sbjct: 48 TIEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIDQ 107
Query: 176 HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
+ V ++LVGN+ + V T +A+ +A + + FE S +FN+ E F ++R
Sbjct: 108 NCDVVNRILVGNKNDDPQRKVVLTEDAQAFADRMNIELFETSAKDNFNVEEMFNAVTRMV 167
Query: 236 LQ 237
L+
Sbjct: 168 LK 169
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 104/183 (56%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHATEGVNKILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S + + T +
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATRS 46
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +H
Sbjct: 47 IQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDH 106
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TEL 231
A + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE+
Sbjct: 107 ADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 166
Query: 232 SRRALQRNGMER 243
R Q+ +R
Sbjct: 167 YRIVSQKQIADR 178
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL + +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFRVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ++R
Sbjct: 172 IYRIVSQKQMVDR 184
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 ANVEQHATEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 20/198 (10%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A+ +YDYL K LL+GDS VGK +L RF D S + S G +
Sbjct: 1 MASGIEYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSFVDTYISTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ I +WL
Sbjct: 46 DFKIRTVDLDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWL 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF- 228
E++ +A V K+LVGN+ L ++ V T +A+ +A + F E S N+ E+F
Sbjct: 106 SEIDRYASDNVCKLLVGNKCDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFL 165
Query: 229 ---TELSRRALQRNGMER 243
+E+ +R + +ER
Sbjct: 166 TMSSEIKKRMATQPTVER 183
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A YD +K L++GDS VGK +L R+ D S S F + G +
Sbjct: 1 MAAHGPYDLQIKLLMIGDSAVGKTSLL---------LRYANDTFS-STFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ +F TI RSY RGAQGI+LVYDIT++ +F+ + W+
Sbjct: 46 DFKIKTINLDGKRVKLQIWDTAGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRSWM 105
Query: 171 KEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
++ EHA G V K+LVGN+ + R V+ E A + + F E S + N+ E+F
Sbjct: 106 AQINEHADGQVNKILVGNKCDNSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFR 165
Query: 230 ELSRRALQR 238
++++ R
Sbjct: 166 AIAQQVTSR 174
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E + L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YDYL K LL+GDS VGK +L RF D ES + S G + +K
Sbjct: 3 QDYDYLFKLLLIGDSGVGKSCLL---------LRFADDSYVES-YISTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SFD + +WL E++
Sbjct: 48 RTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEID 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A V K+LVGN+ L N+ V++ A+ +A + + F E S N+ ++F ++
Sbjct: 108 RYASDNVVKILVGNKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAA 167
Query: 234 RALQR 238
+R
Sbjct: 168 EIKKR 172
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQISDR 184
>gi|417397209|gb|JAA45638.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME----RLWRSNKVGRKPLINFESFTE 263
LQ + E R SN++ L ES E
Sbjct: 168 LVLQAHRKELDGLRTRASNELALAELEEDESKPE 201
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQMSER 184
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQMSER 184
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQISDR 184
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++ + YD L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MSGNRNYDVLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F
Sbjct: 106 ANVEQHASEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFY 165
Query: 230 ELSRRALQR 238
L+ +R
Sbjct: 166 SLASDIKKR 174
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++YDYL K +L+GDS VGK +LS RF R + FC S K + +
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFA 53
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +FD + RWLKE+
Sbjct: 54 TRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKEL 113
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 114 RDHADANIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAF 169
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 20/188 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQR 238
+ R Q+
Sbjct: 172 IYRIVSQK 179
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 20/188 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQR 238
+ R Q+
Sbjct: 172 IYRIVSQK 179
>gi|221116505|ref|XP_002158899.1| PREDICTED: ras-related protein Rab-35-like [Hydra magnipapillata]
Length = 203
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 15/183 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+L K L++GDS VGK IL RF GS + + G + +K
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSILL------RFADDMFSGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL E++
Sbjct: 48 RTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNAESFVNVKRWLHEID 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V KVLVGN+ N+ V T++A+ +A + + FE S + NI + F+ ++
Sbjct: 108 QNCDVVNKVLVGNKNDCLKNKVVDTQDAKTFAAQMGVEVFETSAKDNLNIEQVFSHITAM 167
Query: 235 ALQ 237
L+
Sbjct: 168 VLR 170
>gi|170042777|ref|XP_001849089.1| ras-related protein Rab-8A [Culex quinquefasciatus]
gi|167866246|gb|EDS29629.1| ras-related protein Rab-8A [Culex quinquefasciatus]
Length = 209
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 100/172 (58%), Gaps = 16/172 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILF---------RFSEDAFN-TTFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
E+A V K+L+GN+ L R VT E A++ + F E S NIR
Sbjct: 108 ENASADVEKMLLGNKCELNEKRQVTRDRGEQLAVEYGIKFMETSAKASINIR 159
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L ++DGS F S G + +K
Sbjct: 3 KKSYDALFKLLLIGDSGVGKTCLLIR----------YVDGSYSPSFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L+GK++KLQ+WDT+GQ RF TI SY RGA GI+++YDITN+ +FD I W+K +
Sbjct: 48 IKTIELEGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQTWMKNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
++A V K++VGN+ R V+ E A +++ F E S + N+ ++F EL+
Sbjct: 108 CDYASEDVEKLVVGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELT 167
Query: 233 RRALQR 238
L++
Sbjct: 168 LAILRK 173
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 106/193 (54%), Gaps = 24/193 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L+GDS VGK +LS RF R S+S + +
Sbjct: 6 EDDYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFHLESKSTIG---------VEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I+ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT SF+ ++RWLKE+
Sbjct: 51 TKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKEL 110
Query: 174 EEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
EHA + LVGN+ L R V T EA +A KN +AF E S L + +F
Sbjct: 111 REHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRIL 170
Query: 229 TE----LSRRALQ 237
TE +SR+ +Q
Sbjct: 171 TEIYKLMSRKTMQ 183
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ ++ + +WL+E++
Sbjct: 50 TIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ LA + V EA+ +A + + F E S N+ ++F +S++
Sbjct: 110 YAVEGVNKLLVGNKSDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQ 169
Query: 235 ALQRNG 240
R G
Sbjct: 170 IKDRMG 175
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 104/191 (54%), Gaps = 16/191 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L ES P F S G + +K
Sbjct: 3 KKSYDALFKILLIGDSGVGKTCLLVRYVEESFVP----------TFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L+GK++KLQ+WDT+GQ RF TI SY RGA GI+L+YDIT++ +FD + W+
Sbjct: 48 IKTIELEGKKIKLQIWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRT 107
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
A V K+L+ N+ +A NR V+ E A + + F E S N+ ++F EL+
Sbjct: 108 FSLASNEVEKLLIANKCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELT 167
Query: 233 RRALQRNGMER 243
R L + + R
Sbjct: 168 RAILHNSSIRR 178
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A +A N+M F E S L N+ ++F ++++
Sbjct: 109 YATSTVLKLLVGNKCDLEDKRVVEYDVAREFAEANKMPFLETSALDSTNVEQAFLTMAKQ 168
>gi|165377074|ref|NP_598811.3| ras-related protein Rab-15 [Mus musculus]
gi|338719887|ref|XP_003364076.1| PREDICTED: ras-related protein Rab-15-like [Equus caballus]
gi|74177394|dbj|BAE34591.1| unnamed protein product [Mus musculus]
Length = 212
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 38 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 82
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 83 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 142
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 143 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 202
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 203 IYRIVSQKQIADR 215
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 109/181 (60%), Gaps = 16/181 (8%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK LL+GDS VGK +L RF D S++ F S G + +KT TI +D
Sbjct: 13 LKLLLIGDSSVGKSSLL---------LRFAEDSFSQT-FISTIG-----VDFKTRTIDID 57
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PG 179
G++VKL +WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W++ +EEHA
Sbjct: 58 GEQVKLSIWDTAGQERFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHASEN 117
Query: 180 VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRN 239
V K+LVGN+ + R V+ + + A + ++ FFE S D N+ E+F ++R + +
Sbjct: 118 VCKILVGNKADMEDRRVVSKEQGQALANEFRIKFFETSAKADINVEEAFVCIARESKKLA 177
Query: 240 G 240
G
Sbjct: 178 G 178
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQ 164
Query: 223 NIRESFTELSRRALQR 238
N+ + F +++ QR
Sbjct: 165 NVEQVFLSIAKDIKQR 180
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQ 164
Query: 223 NIRESFTELSRRALQR 238
N+ + F +++ QR
Sbjct: 165 NVEQVFLSIAKDIKQR 180
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + W++E+++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDK 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + VT E + A + + F E S N+ ++F E+S
Sbjct: 109 YATENVSKLLVGNKTDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSE 168
Query: 235 ALQR 238
R
Sbjct: 169 IKSR 172
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 110/198 (55%), Gaps = 22/198 (11%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWL-------------DGSSESPFCSG 102
YDYL+K LL+GDS G I G YL + + D S + F +
Sbjct: 11 DYDYLVKLLLIGDS--GLNLIAFGSYLICTKANYLILGLGKSCLLLRFSDDSFTTSFITT 68
Query: 103 SGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWS 162
G + +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ S
Sbjct: 69 IG-----IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESS 123
Query: 163 FDGIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLC 220
F+ I W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S
Sbjct: 124 FNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKT 183
Query: 221 DFNIRESFTELSRRALQR 238
+FN+ + F ++R QR
Sbjct: 184 NFNVEQVFFSIARDIKQR 201
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 RRPYDMLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + ++F E S + ++ +F +L+
Sbjct: 108 DEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILAK 173
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDAYVDTYISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL E++
Sbjct: 50 TVELDGKSVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
+A V K+LVGN+ L ++ V T EA+ A M F E S N+ ++F +E
Sbjct: 110 YASDSVCKLLVGNKCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSSE 169
Query: 231 LSRRALQRNGMER 243
+ +R + ER
Sbjct: 170 IKKRMATQPAAER 182
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 67 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 111
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 112 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 171
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 172 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 231
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 232 IYRIVSQKQIADR 244
>gi|114052380|ref|NP_001040003.1| ras-related protein Rab-15 [Bos taurus]
gi|116255979|sp|Q1RMR4.1|RAB15_BOVIN RecName: Full=Ras-related protein Rab-15
gi|92098359|gb|AAI14761.1| RAB15, member RAS onocogene family [Bos taurus]
gi|296482998|tpg|DAA25113.1| TPA: RAB15, member RAS onocogene family [Bos taurus]
Length = 212
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQ 237
LQ
Sbjct: 168 LVLQ 171
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YD+L K L++GDS VGK +L RF +GS + + G + +K
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E+E
Sbjct: 48 QTVDIDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + + FE S + N++E F ++R+
Sbjct: 108 QNCDVVNRVLVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQ 167
Query: 235 ALQRNGMERLWR 246
L R ER R
Sbjct: 168 VL-RTKKERKER 178
>gi|426233532|ref|XP_004010770.1| PREDICTED: ras-related protein Rab-15 [Ovis aries]
Length = 212
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQ 237
LQ
Sbjct: 168 LVLQ 171
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 16/196 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
V ++YD+L K L++GDS VGK +L RF +GS + + G +
Sbjct: 47 VKMAREYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----V 91
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL
Sbjct: 92 DFKIQTVDIDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWL 151
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E+E++ V +VLVGN+ + V T +A+ +A + + FE S + N++E F
Sbjct: 152 HEIEQNCDVVNRVLVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMA 211
Query: 231 LSRRALQRNGMERLWR 246
++R+ L R ER R
Sbjct: 212 ITRQVL-RTKKERKER 226
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A Q YD +K L++GDS VGK +L ES P F + G +
Sbjct: 1 MANQSAYDMQVKLLMIGDSGVGKTCLLLRYANESFSP----------TFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K + +DGKR+KLQ+WDT+GQ RF TI SY RGAQGILLVYD+T++ SF+ I W+
Sbjct: 46 DFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWI 105
Query: 171 KEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
++++HA V K+LVGN+ + + V+T E + A + + F+E S D N+ +F
Sbjct: 106 SQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFL 165
Query: 230 ELSRRALQR 238
++R R
Sbjct: 166 TIARAVKDR 174
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 20/188 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--YK 113
+D L K LL+GDS GK +L RF +E+ F S Y + +K
Sbjct: 5 DFDLLFKVLLIGDSGTGKSCLL---------IRF-----AENIF---SDNYISTIGVDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI +DGK +K+Q+WDT+GQ RF TI SY RG+ GI+LVYD+TN+ SFD I+ W+KE+
Sbjct: 48 IKTINVDGKTIKMQVWDTAGQERFRTITASYYRGSNGIILVYDVTNRDSFDHINYWMKEI 107
Query: 174 EE-HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ AP V +++VGN+ L+ R VTT E + A + ++F E S L + N+ E FT ++
Sbjct: 108 DRLAAPDVCRLIVGNKSDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMA 167
Query: 233 RRALQRNG 240
+ ++ G
Sbjct: 168 KAMRKKQG 175
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++GK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ +WL E++
Sbjct: 49 TIEMEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNAKQWLSEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA +RTV T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVCKLLVGNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMS 166
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ YA + + F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRMG 174
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLL---------RFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLV+D+T++ SF+ + W +E+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA GV K+L+GN+ R V+T + E A + + + E S + N+ E+F L+R
Sbjct: 110 HASEGVSKILIGNKSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLARE 169
Query: 235 ALQR 238
R
Sbjct: 170 VKTR 173
>gi|195609720|gb|ACG26690.1| ras-related protein ARA-3 [Zea mays]
gi|414591886|tpg|DAA42457.1| TPA: ras protein ARA-3 [Zea mays]
Length = 224
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 115/197 (58%), Gaps = 22/197 (11%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P ++ YD+L+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 4 PPSRSRGDYDHLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDG--- 165
+ +K T+ LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SFD
Sbjct: 50 -IDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDSTQQ 108
Query: 166 ---IDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCD 221
I W++ +E+HA V K+LVGN++ + R V+T + + A + + FFE S +
Sbjct: 109 HAHIRNWIRNIEQHASDNVNKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTN 168
Query: 222 FNIRESFTELSRRALQR 238
N+ + F ++R QR
Sbjct: 169 RNVEQVFFAMARDVKQR 185
>gi|27734454|sp|Q8K386.1|RAB15_MOUSE RecName: Full=Ras-related protein Rab-15
gi|20380722|gb|AAH27769.1| RAB15, member RAS oncogene family [Mus musculus]
gi|112292989|dbj|BAF02872.1| Rab15 [Mus musculus]
Length = 212
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQ 237
LQ
Sbjct: 168 LVLQ 171
>gi|442755753|gb|JAA70036.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 222
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 122/222 (54%), Gaps = 24/222 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K +++GDS GK +L RF D SES + + +K
Sbjct: 2 KEYDHLFKIIIIGDSGAGKSSLL---------LRFADDTYSESNMSTIG------VDFKI 46
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR-WLKEV 173
T+ +D +KLQ+WDT+GQ RF TI +Y RGA GI+ VYD+TN+ SF+ + + WL ++
Sbjct: 47 KTVKIDNVTIKLQIWDTAGQERFRTITSTYYRGAHGIITVYDVTNRVSFESVKKTWLTDI 106
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+++ + K+L+GN++ L NR VT+ EA +A++N M + E S N+ ++F ++
Sbjct: 107 EKYSSANISKLLIGNKVDLEENRAVTSVEAREFAMQNNMDYIEASAKTAQNVEKAFESIA 166
Query: 233 RRALQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNGM 274
+ ++ R+ P N + +R A+ RN +
Sbjct: 167 KTL-----KDKATRNTTAAPTP--NAFNLNSTTRVAINRNAV 201
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ ++ + +WL+E++
Sbjct: 50 TIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ LA + V EA+ +A + + F E S N+ ++F +S++
Sbjct: 110 YAVEGVNKLLVGNKSDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQ 169
Query: 235 ALQRNG 240
R G
Sbjct: 170 IKDRMG 175
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 19/210 (9%)
Query: 32 ILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWL 91
I + L WL+ +++ +YDYL K LL+GDS VGK +L RF
Sbjct: 6 IGAAVPLPTADWLLT---LLSPHNRYDYLFKLLLIGDSGVGKSCLLL---------RFAD 53
Query: 92 DGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI 151
D +ES + S G + +K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI
Sbjct: 54 DTYTES-YISTIG-----VDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGI 107
Query: 152 LLVYDITNKWSFDGIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQ 210
+VYD+T+ SF+ + +WL+E++ +A GV K+LVGN+ +A + V A+ +A
Sbjct: 108 CVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLG 167
Query: 211 MAFFEVSPLCDFNIRESFTELSRRALQRNG 240
+ F E S N+ ++F ++R+ +R G
Sbjct: 168 IPFLETSAKSATNVEQAFLTMARQIKERMG 197
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA ++A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|301756687|ref|XP_002914198.1| PREDICTED: ras-related protein Rab-15-like [Ailuropoda melanoleuca]
Length = 212
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 16/189 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L + ++ F R + S SG + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC-RFSDNAFLRLHI---------STSG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 2 RRPYDMLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 47 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 106
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + ++F E S + ++ +F +L+
Sbjct: 107 DEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLA 166
Query: 233 RRALQR 238
L +
Sbjct: 167 EAILAK 172
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 111/202 (54%), Gaps = 21/202 (10%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL K +L+GDS VGK +LS RF R + S+S + + T +
Sbjct: 6 YHYLFKVVLIGDSGVGKSNLLS------RFARNEFNQDSKSTIG---------VEFATRS 50
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ + +F+ ++RWLKE+ +H
Sbjct: 51 IEFDGKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDH 110
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL---S 232
A + +LVGN+ L R V T EA+ +A +NQ+ F E S L N+ +F ++
Sbjct: 111 ADASIVIMLVGNKSDLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANV 170
Query: 233 RRALQRNGMERLWRSNKVGRKP 254
+ + ME SN+V P
Sbjct: 171 YKVVSNKAMEN--ESNRVATGP 190
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 19/183 (10%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--YKT 114
+D+L K L++GDS VGK +L RF S+ F SG Y + +K
Sbjct: 5 FDHLFKLLIIGDSGVGKSSLL---------IRF-----SDDTF---SGSYITTIGVDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+++DG RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL E++
Sbjct: 48 RTVVIDGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGESFANVRRWLDEIQ 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+ V KVLVGN+ + V T +A+ +A + + FE S + N+ E F ++R+
Sbjct: 108 NNCDVVNKVLVGNKNDDPDRKVVITEDAQRFARQMDIELFETSAKDNVNVEEMFLSITRQ 167
Query: 235 ALQ 237
LQ
Sbjct: 168 VLQ 170
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 105/186 (56%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YD L+K LL+GDS VGK L +S P F + G + +K
Sbjct: 3 NRNYDVLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W V
Sbjct: 48 IRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANV 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
E+HA GV K+L+GN+ R V+T + + A + + F EVS + NI ++F L+
Sbjct: 108 EQHASEGVNKILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSLA 167
Query: 233 RRALQR 238
+R
Sbjct: 168 SDIKKR 173
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 8 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 53 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 113 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQ 172
Query: 235 ALQRNG 240
+R G
Sbjct: 173 IKERMG 178
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 113/202 (55%), Gaps = 21/202 (10%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK +L RF D S + S G + +K TI
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLL------RFA----DDSYIDTYISTIG-----VDFKIRTI 49
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL E++ +A
Sbjct: 50 ELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYA 109
Query: 178 -PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V K+LVGN+ L ++ V T EA+ +A ++F E S N+ E+F +S
Sbjct: 110 SDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMS---- 165
Query: 237 QRNGMERLWRSNKVGRKPLINF 258
+ +R+ V RKP ++
Sbjct: 166 -SDIKKRMATQPAVERKPTVHI 186
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 16/187 (8%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ YD+L+K LL+GDS VGK L +S P F + G + +
Sbjct: 5 NNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----IDF 49
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W +
Sbjct: 50 KIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQN 109
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
VE+HA GV K+L+GN+ R ++ + + A + + F EVS + NI ++F L
Sbjct: 110 VEQHATEGVNKILIGNKCDWEDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSL 169
Query: 232 SRRALQR 238
+ +R
Sbjct: 170 AADIKKR 176
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YD+L K L++GDS VGK +L RF +GS + + G + +K
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E+E
Sbjct: 48 QTVDIDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + + FE S + N++E F ++R+
Sbjct: 108 QNCDVVNRVLVGNKNDSPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQ 167
Query: 235 ALQRNGMERLWR 246
L R ER R
Sbjct: 168 VL-RTKKERKER 178
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDTYTADYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L ++V A+ +A + F E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKSDLTDKKSVDYNVAKEFADALDIPFLETSALNSTNVEQAFFTMARQ 168
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++YDYL K +L+GDS VGK +LS RF R + FC S K + +
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 51 TRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKEL 110
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 111 RDHADYNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAF 166
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S + + T +
Sbjct: 8 YDYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESKSTIG---------VEFATKS 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I+ GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ + SF+ ++RWLKE+ +H
Sbjct: 53 IMTQGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDH 112
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
A P + +LVGN+ L R VT EA M++ K MA E S L N+ ++F
Sbjct: 113 ADPNIVVLLVGNKSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAF 165
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 113/210 (53%), Gaps = 35/210 (16%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK +L RF DGS + F + G
Sbjct: 4 PPARARSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHL---------------AFNRTVTTREAEMY----AIK 208
W++ +E+HA V K+LVGN+ + F+ T+ + Y A +
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRVCLTHSLFVHPFHFPCTSISCDYYGQALADE 168
Query: 209 NQMAFFEVSPLCDFNIRESFTELSRRALQR 238
+ FFE S + N+ E F ++R QR
Sbjct: 169 YGIKFFETSAKTNMNVDEVFFSIARDIKQR 198
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YD+L K L++GDS VGK +L RF +GS + + G + +K
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E+E
Sbjct: 48 QTVDVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + + FE S + N++E F ++R+
Sbjct: 108 QNCDVVNRVLVGNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNVNVQEMFMAITRQ 167
Query: 235 ALQRNGMERLWR 246
L R ER R
Sbjct: 168 VL-RTKKERKER 178
>gi|290999034|ref|XP_002682085.1| rab family small GTPase [Naegleria gruberi]
gi|284095711|gb|EFC49341.1| rab family small GTPase [Naegleria gruberi]
Length = 236
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 105/191 (54%), Gaps = 16/191 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + QYDYL K LL+GDS VGK S L L RF D + + +
Sbjct: 6 PSRSGNAQYDYLCKLLLIGDSGVGK----SCLLL-----RFSDDTFTTNFITTIG----- 51
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GI+L YD+T++ SF I
Sbjct: 52 -IDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGIMLTYDVTDEQSFLNIRN 110
Query: 169 WLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W+K +EEHA V K+L+GN+ L + V T + A + F E S + N+ E+
Sbjct: 111 WMKNIEEHAADNVNKMLIGNKCDLIEKKIVETERGQSLAKSYGIPFMETSAKNNINVEEA 170
Query: 228 FTELSRRALQR 238
F ++R R
Sbjct: 171 FFTIAREIKSR 181
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 17/185 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLL---------LRF-TDDSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
LDGKR+KLQ+WDT+GQ RF TI +Y R A GILLVYD+T++ SF+ I W+K +E+
Sbjct: 56 IFELDGKRIKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA V K+LVGN+ + R V+T + A + + FFE S + N+ ++F +++
Sbjct: 116 HASDNVNKILVGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAK 175
Query: 234 RALQR 238
++R
Sbjct: 176 DIMKR 180
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V + A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+YD+L K LL+GDS VGK +L RF D + + S G + +K
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLL------RFA----DDTYTPDYISTIG-----VDFK 46
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 47 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEI 106
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A GV K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++
Sbjct: 107 DRYATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMA 166
Query: 233 RR 234
R+
Sbjct: 167 RQ 168
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F +
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 111/192 (57%), Gaps = 16/192 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+V+ +YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 1 MVSINPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI L+GK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ SF+ + +W
Sbjct: 46 VDFKIRTIDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQW 105
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L+E++ +A V K+LVGN+ L R V A+ YA + + F E S N+ ++F
Sbjct: 106 LQEIDRYACENVNKLLVGNKCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAF 165
Query: 229 TELSRRALQRNG 240
++ R G
Sbjct: 166 LTMASEIKNRMG 177
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 21/218 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K LL+GDS VGK +L RF D +ES + S G + +K T
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRT 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ +F + +WL+E++ +
Sbjct: 53 IELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRY 112
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A GV K+LVGN+ L + V A+ +A + Q+ F E S N+ ++F ++++
Sbjct: 113 ACEGVNKLLVGNKSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQI 172
Query: 236 LQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNG 273
R G + +N+ G K + + +S+ Q NG
Sbjct: 173 KDRMGSSTV--NNQAGGKSTLKVGAGQNVSQ---QSNG 205
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 19/185 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
++YD+L K L++GDS VGK +L RF S++ F SG Y + +
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLL---------IRF-----SDNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T++++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL+E
Sbjct: 46 KIRTVVINGERVKLQIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+E + V KVLVGN+ + V T +++ +A + + FE S + N+ E F ++
Sbjct: 106 IESNCDVVNKVLVGNKNDDPNRKVVITEDSDRFAKQMDIQLFETSAKDNLNVEEMFLAIT 165
Query: 233 RRALQ 237
+ L+
Sbjct: 166 EQVLR 170
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 55 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 99
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 100 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 159
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 160 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 219
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 220 IYRIVSQKQIADR 232
>gi|308483958|ref|XP_003104180.1| CRE-RAB-35 protein [Caenorhabditis remanei]
gi|308258488|gb|EFP02441.1| CRE-RAB-35 protein [Caenorhabditis remanei]
Length = 209
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 102/179 (56%), Gaps = 15/179 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L K L++GDS VGK +L RF D + + + G +
Sbjct: 1 MAGTRDYDHLFKLLIIGDSGVGKSSLLL------RFA----DNTFSENYITTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ ++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL
Sbjct: 46 DFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWL 105
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E+E + V KVLVGN+ + R V +A YA +AFFE S D N+ FT
Sbjct: 106 QEIENNCDSVQKVLVGNKCEESDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFT 164
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDIT +FD I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R + E A ++ + F E S + N+ ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 104/185 (56%), Gaps = 18/185 (9%)
Query: 50 VVATQKQ--YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYD 107
V+A+ K+ YDYL K +L+GDS VGK +LS RF R S+S
Sbjct: 164 VMASPKEDDYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFHLESKSTIG------- 210
Query: 108 DMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGID 167
+ + T +I+ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT SF+ ++
Sbjct: 211 --VEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVE 268
Query: 168 RWLKEVEEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
RWLKE+ EHA + LVGN+ L R V T EA +A KN +AF E S L +
Sbjct: 269 RWLKELREHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDS 328
Query: 227 SFTEL 231
+F +
Sbjct: 329 AFQRI 333
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL+K LL+GDS VGK +L RF D S + F + G + +K
Sbjct: 9 RADYDYLIKLLLIGDSGVGKSCLLL------RFS----DDSFTTSFITTIG-----IDFK 53
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +
Sbjct: 54 IRTVDLDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI 113
Query: 174 EEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF--- 228
E+HA V K+LVGN+ + R V+T + A + + FFE S + N+ + F
Sbjct: 114 EQHASDNVNKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTI 173
Query: 229 -TELSRRALQRNGMERLWRSNKVGRKP 254
++ RR + + R N + P
Sbjct: 174 AGDIKRRLAETDSRPEPPRINNIVLDP 200
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 19/211 (9%)
Query: 31 EILSGYKLELTAWLMETKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFW 90
+IL+ E + ++ +T A +YDYL K LL+GDS VGK +L RF
Sbjct: 13 QILTKNPTEKSKYITKTD---ANHNRYDYLFKLLLIGDSGVGKSCLL---------LRFA 60
Query: 91 LDGSSESPFCSGSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG 150
D +ES + S G + +K TI LDGK VKLQ+WDT+GQ RF TI SY RGA G
Sbjct: 61 DDTYTES-YISTIG-----VDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHG 114
Query: 151 ILLVYDITNKWSFDGIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKN 209
I +VYD+T+ SF+ + +WL+E++ +A GV K+LVGN+ + + V A+ +A
Sbjct: 115 ICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMEDKKAVEYTVAKEFADSL 174
Query: 210 QMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
+ F E S N+ ++F ++R+ +R G
Sbjct: 175 GIPFLETSAKSASNVEQAFLTMARQIKERMG 205
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 122/214 (57%), Gaps = 18/214 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D ++ + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFAEDTYTQ-DYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ +++WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L + V A+ +A + F E S N+ ++F +S++
Sbjct: 109 YATSGVMKLLVGNKCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAFIVMSKQ 168
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFTELSRRA 268
++ M ++ KP +N + ++++
Sbjct: 169 I--KSQMANSQPASNTAGKPSVNLSGTSVINQQG 200
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 24/189 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKY 106
++ Q++YDYL K LL+G+S VGK +L ++ ES P +D
Sbjct: 1 MSMQQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVD-------------- 46
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+K T L+GK VKLQ+WDT+GQ RF TI SY +GA GI+LVYD+T+K SF +
Sbjct: 47 -----FKIRTFDLNGKTVKLQIWDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDV 101
Query: 167 DRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
+ WL EVE++A V +VLVGN++ L R VT E + A + F E S N+
Sbjct: 102 ENWLAEVEKYANENVVRVLVGNKVDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVE 161
Query: 226 ESFTELSRR 234
++F L+
Sbjct: 162 KAFITLANE 170
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI L+GKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIELEGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V+T + + +A + F E S N+ ++F ++ +
Sbjct: 109 YACENVNKLLVGNKCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQ 168
Query: 235 ALQR 238
R
Sbjct: 169 IKAR 172
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVKMWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K++VGN+ L R V A+ +A Q+ F E S L N+ E+F ++++
Sbjct: 109 YATAGVLKLMVGNKSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQ 168
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 108/191 (56%), Gaps = 16/191 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P YDYL+K LL+GDS VGK +L RF D + S F + G
Sbjct: 7 PASNKSAAYDYLIKLLLIGDSGVGKSCLLL---------RFSEDSFTPS-FITTIG---- 52
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I
Sbjct: 53 -IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN 111
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W++ +E+HA V K+L+GN+ +A + V + + A + + F E S N+ E+
Sbjct: 112 WIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEA 171
Query: 228 FTELSRRALQR 238
F L++ +R
Sbjct: 172 FISLAKDIKKR 182
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF D + S F + G + +K T
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLL---------LRFSEDSFTPS-FITTIG-----IDFKIRT 59
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W++ +E+H
Sbjct: 60 IELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQH 119
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+L+GN+ L + V + + A ++ + F E S N+ E+F L++
Sbjct: 120 ATESVNKMLIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDI 179
Query: 236 LQR 238
+R
Sbjct: 180 KKR 182
>gi|268572557|ref|XP_002641352.1| C. briggsae CBR-RAB-35 protein [Caenorhabditis briggsae]
Length = 209
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L K L++GDS VGK +L RF D + + + G +
Sbjct: 1 MAGTRDYDHLFKLLIIGDSGVGKSSLLL------RFA----DNTFSENYITTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ ++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL
Sbjct: 46 DFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWL 105
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E+E + V KVLVGN+ R V +A YA +AFFE S D N+ FT
Sbjct: 106 QEIENNCDSVQKVLVGNKCEETDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFT 164
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 18/182 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDG-SSESPFCSGSGKYDDMLAY 112
++ YDYL K +++GDS VGK ILS RF D S ES G + +
Sbjct: 5 EEDYDYLFKIVIIGDSGVGKTNILS---------RFTKDEFSIESKPTIG-------VEF 48
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T T+L D K +K Q+WDT+GQ ++ I +Y RGA G L ++DIT + +FD + +WL E
Sbjct: 49 ATKTVLNDNKLIKAQIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNE 108
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++E+A P + +LVGN+ L NR V T +A +A +NQ+A+ E S L N+ E+F +
Sbjct: 109 LKENADPNIVIMLVGNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
Query: 232 SR 233
+R
Sbjct: 169 TR 170
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 16/193 (8%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
T P YD+L+K LL+GDS VGK +L RF DGS F + G
Sbjct: 2 TSPATNKPAAYDFLVKLLLIGDSGVGKSCLLL------RFS----DGSFTPSFIATIG-- 49
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+ +K TI L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I
Sbjct: 50 ---IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSI 106
Query: 167 DRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
W++ +E+HA V K+L+GN+ + + V + + A + + F E S N+
Sbjct: 107 RNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVE 166
Query: 226 ESFTELSRRALQR 238
E+F L++ +R
Sbjct: 167 EAFIGLAKDIKKR 179
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 21/203 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV ++LVGN+ + + V A+ +A + F E S N+ ++F +SR+
Sbjct: 109 YAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQ 168
Query: 235 ALQRNGMERLWRSN-----KVGR 252
+R G SN KVG+
Sbjct: 169 IKERMGNNTFASSNAKSSVKVGQ 191
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>gi|393911208|gb|EJD76212.1| hypothetical protein LOAG_16781 [Loa loa]
Length = 292
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 18/185 (9%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+VA Q + L LL+GDS VGK +L RF D S + F S G
Sbjct: 83 IVAIQSINEVTL--LLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG----- 125
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W
Sbjct: 126 IDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNW 185
Query: 170 LKEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
++ +EEHA V ++++GN+ + R V+ E AI+ F E S + N+ E+F
Sbjct: 186 IRNIEEHASSDVDRMIIGNKCDVEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAF 245
Query: 229 TELSR 233
L+R
Sbjct: 246 FTLAR 250
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++DYL K LL+GDS VGK S F + D S + S G + +K
Sbjct: 4 EFDYLFKLLLIGDSSVGK----------SCFLLRFADDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT+ SF+ + +WL E+ +
Sbjct: 49 TLDMDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEINK 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA +R V T A+ YA + + F E S N+ E+F +S
Sbjct: 109 YANDSVRKLLVGNKCDLAESRVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMS 166
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 21/207 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 3 ANINRYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VD 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+
Sbjct: 48 FKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQ 107
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A GV ++LVGN+ + + V A+ +A + F E S N+ ++F
Sbjct: 108 EIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLT 167
Query: 231 LSRRALQRNGMERLWRSN-----KVGR 252
+SR+ +R G SN KVG+
Sbjct: 168 MSRQIKERMGNNTFASSNAKSSVKVGQ 194
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 20/190 (10%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFA 49
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ +DRWL+E+
Sbjct: 50 TRSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLREL 109
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
+HA + +LVGN+ L R V T EA+ +A +N ++F E S L N+ +F
Sbjct: 110 RDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNIL 169
Query: 229 TELSRRALQR 238
TE+ R Q+
Sbjct: 170 TEIYRIVSQK 179
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESKSTIG---------VEFA 49
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I+ +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ + SF+ ++RWLKE+
Sbjct: 50 TKSIITEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKEL 109
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA P + +LVGN+ L RTVT EA ++ + MA E S L N+ E+F
Sbjct: 110 RDHADPNIVVLLVGNKSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAF 165
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+D +K L++GDS VGK +L R+ D S++ F + G + +K
Sbjct: 8 FDMQIKLLMIGDSGVGKTCLL---------LRYANDSFSQT-FITTIG-----IDFKIKN 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LD KR+KLQ+WDT+GQ RF TI SY RGAQGILLVYD+T+K SF+ I W+ ++++H
Sbjct: 53 IDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQH 112
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+L+GN+ + +R V+ E A + + FFE S D N+ + F ++R
Sbjct: 113 ADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREV 172
Query: 236 LQR 238
R
Sbjct: 173 KDR 175
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 24/193 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L+GDS VGK +LS RF + S+S + +
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLS------RFTKNEFSLESKSTIG---------VEFA 51
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I +D K VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ +DRWLKE+
Sbjct: 52 TRSIRVDEKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKEL 111
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE-- 230
+H + +LVGN+ L R V+T +A+ YA K F E S L N+ +FTE
Sbjct: 112 RDHTDSSIVIMLVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVL 171
Query: 231 ------LSRRALQ 237
+SR+AL+
Sbjct: 172 TQIYHVVSRKALE 184
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 16/175 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFAT 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 52 RTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELR 111
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 112 DHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAF 166
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 18/213 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K LL+GDS VGK +L RF D +ES + S G + +K T
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRT 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ +F + +WL+E++ +
Sbjct: 53 IELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRY 112
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A GV K+LVGN+ L + V A+ +A + Q+ F E S N+ ++F ++++
Sbjct: 113 ACEGVNKLLVGNKSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQI 172
Query: 236 LQRNGMERLWRSNKVGRKPLINFESFTELSRRA 268
R G + +N+ G K + + +S+++
Sbjct: 173 KDRMGSSTV--NNQAGGKSTLKVGAGQNVSQQS 203
>gi|432944928|ref|XP_004083456.1| PREDICTED: ras-related protein Rab-15-like [Oryzias latipes]
Length = 213
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLC------RFT----DNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+++DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ SF I +W +V+
Sbjct: 48 KTLVIDGVKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V K+LVGN+ R V T + A M FFE S + NI E+FT L+
Sbjct: 108 EYAPDKVQKILVGNKSDDVDKRQVATEQGVKLAQNYGMDFFETSAFTNHNITETFTRLAE 167
Query: 234 RALQRN 239
R L N
Sbjct: 168 RVLAAN 173
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 103/174 (59%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGK VK Q+WDT+GQ R+ I +Y RGA G LLV+DIT + +FD + RWL+E+ +
Sbjct: 53 TLQIDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRD 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + ++VGN+ L R+V +++ ++ K ++F E S L N+ ++F
Sbjct: 113 HADANIVVMMVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAF 166
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + ++ F E S N+ ++F ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD +K L++GDS VGK +L +S P F + G + +K
Sbjct: 7 YDMQIKLLMIGDSGVGKTCLLLRYANDSFSP----------TFITTIG-----IDFKIKN 51
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGKR+KLQ+WDT+GQ RF TI SY RGAQGILLVYD+T++ SF+ I W+ ++++H
Sbjct: 52 VEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQH 111
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+LVGN+ + + V+T E + A + + FFE S D N+ +SF ++R
Sbjct: 112 ADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFFECSAKNDINVEQSFLGIARSV 171
Query: 236 LQR 238
R
Sbjct: 172 KDR 174
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L K++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL +
Sbjct: 48 IKTVELQEKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKFDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLA 167
Query: 233 RRALQR 238
+ L++
Sbjct: 168 QDILRK 173
>gi|307176976|gb|EFN66282.1| Ras-related protein Rab-35 [Camponotus floridanus]
Length = 201
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 16/192 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YD+L K L++GDS VGK +L RF +GS + + G + +K
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ +F + RWL E+E
Sbjct: 48 QTVEIDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + + FE S + N+ E F ++R+
Sbjct: 108 QNCDVVNRVLVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQ 167
Query: 235 ALQRNGMERLWR 246
L R ER R
Sbjct: 168 VL-RTKKERKER 178
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F ++
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQI 168
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 27/214 (12%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
T+ +YDYL K +L+GDS VGK +LS RF R + S+S + +
Sbjct: 4 TEDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEF 48
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T +I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE
Sbjct: 49 ATRSIQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKE 108
Query: 173 VEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+ +HA + +LVGN+ L R V T EA+ +A KN + F E S L N+ +F ++
Sbjct: 109 LRDHADHHIVIMLVGNKNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQI 168
Query: 232 --------SRRALQRNG---MERLWRSNKVGRKP 254
SR+ + +G + L NK+ P
Sbjct: 169 LTDIYHIVSRKQMANDGDADIAALKNENKITIPP 202
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + ++ GN+ L R V+ +A M A K ++F E S L NI ++F +
Sbjct: 113 HADSNIVIMMAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSI 169
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 16/175 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFAT 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 52 RTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELR 111
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 112 DHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAF 166
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 107/190 (56%), Gaps = 16/190 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 5 AMSPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VD 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + WL+
Sbjct: 50 FKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLE 109
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E+E +A V K+LVGN+ L + V T A YA + + F E S N+ ++F
Sbjct: 110 EIERYACENVNKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMT 169
Query: 231 LSRRALQRNG 240
++ R G
Sbjct: 170 MAAEIKNRVG 179
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYNES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + WL E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V T A+ +A + F E S N+ ++F +++
Sbjct: 109 YANESVNKLLVGNKNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQE 168
Query: 235 ALQR 238
+R
Sbjct: 169 IKER 172
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F +
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNI 168
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D ++S + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTDS-YISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ +F + +WL+E++
Sbjct: 50 TIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQWLQEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L + V EA+ +A + + F E S N+ ++F +S++
Sbjct: 110 YAVEGVNKLLVGNKSDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQ 169
Query: 235 ALQRNG 240
R G
Sbjct: 170 IKDRMG 175
>gi|21592670|gb|AAM64619.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 111/196 (56%), Gaps = 18/196 (9%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK +L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGKSCLLL------RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDNFNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNL 164
Query: 223 NIRESFTELSRRALQR 238
N+ F +++ QR
Sbjct: 165 NVENVFMSIAKDIKQR 180
>gi|145515201|ref|XP_001443500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834479|emb|CAI44558.1| rab_A52 [Paramecium tetraurelia]
gi|124410889|emb|CAK76103.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 106/192 (55%), Gaps = 25/192 (13%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM-- 109
A + YD+L+K +++GDS VGK ILS FC M
Sbjct: 5 ANSQDYDWLVKVIVIGDSGVGKTNILS-------------------QFCDAKFSITHMAT 45
Query: 110 --LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGID 167
+ +K TI +DGK++KLQ+WDT+GQ RF I ++Y +GAQG++L Y + ++ SF +D
Sbjct: 46 LGVDFKIKTIDVDGKKLKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVIDRQSFQNVD 105
Query: 168 RWLKEVEE--HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
WL+ ++E ++ V VLVGN+ ++ R VT E + + + + FFE S + NI
Sbjct: 106 GWLRSIQENTNSSDVQLVLVGNKADMSAERQVTLEEGKKMSQQYNIPFFETSAKSNMNIN 165
Query: 226 ESFTELSRRALQ 237
E+F L+ R +Q
Sbjct: 166 EAFNNLAFRIIQ 177
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK +L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLL------RFS----DDTYSNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI +DGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+ + WL+E++
Sbjct: 49 TIEIDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNSVKMWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N M F E S L N+ E+F ++++
Sbjct: 109 YATSSVLKLLVGNKSDLKDKRIVEYDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQ 168
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|332030618|gb|EGI70306.1| Ras-related protein Rab-35 [Acromyrmex echinatior]
Length = 201
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 16/192 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YD+L K L++GDS VGK +L RF +GS + + G + +K
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLL------RFADNTFNGS----YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ +F + RWL E+E
Sbjct: 48 QTVEVDGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDTFANVKRWLHEIE 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
++ V +VLVGN+ + V T +A+ +A + + FE S + N+ E F ++R+
Sbjct: 108 QNCDVVNRVLVGNKNDAPNQKVVLTEDAQRFANQMGIQLFETSAKDNINVEEMFMAITRQ 167
Query: 235 ALQRNGMERLWR 246
L R ER R
Sbjct: 168 VL-RTKKERKER 178
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 16/182 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++++++YD+L K +L+GDS VGK +LS RF R + S+S +
Sbjct: 1 MSSEEEYDFLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI S++ + RWL
Sbjct: 46 EFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWL 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
KE+ +HA + +LVGN+ L R V EA +A +N ++F E S L N+ E+F
Sbjct: 106 KELRDHADSNIVIMLVGNKSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFK 165
Query: 230 EL 231
+
Sbjct: 166 NI 167
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 19/198 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR- 233
HA + LVGN+ L R V T EA+ +A++N + F E S L N+ SF +L +
Sbjct: 116 HADANIVIELVGNKSDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKN 175
Query: 234 --RALQRNGMERLWRSNK 249
+ ++ +E SNK
Sbjct: 176 IYEMISKHQLENNADSNK 193
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + M F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRVG 174
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 16/179 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 1 MAEGSNYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLDSKSTIG---------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T TI +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI ++ + RWL
Sbjct: 46 EFATRTINVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWL 105
Query: 171 KEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
KE+ +HA + +LVGN+ L R V T EA+ +A +N+++F E S L N+ +F
Sbjct: 106 KELRDHADANIVIMLVGNKSDLKHLRAVPTEEAKTFATENELSFIETSALDASNVESAF 164
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 RRPYDMLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + + F E S + ++ +F +L+
Sbjct: 108 DEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILAK 173
>gi|50539696|ref|NP_001002318.1| ras-related protein Rab-15 [Danio rerio]
gi|49899166|gb|AAH75754.1| Zgc:86635 [Danio rerio]
Length = 212
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLC------RFT----DNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ SF I +W +V+
Sbjct: 48 KTLEIDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V K+LVGN+ R V T + + A M FFE S + NI ESFT L+
Sbjct: 108 EYAPEKVQKILVGNKSDEQEKRQVATEQGDKLAKAYGMDFFETSAFTNHNITESFTRLAE 167
Query: 234 RALQRN 239
LQ N
Sbjct: 168 LVLQAN 173
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q++ +R
Sbjct: 172 IYRIVSQKHMSDR 184
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 110/201 (54%), Gaps = 17/201 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI+ S++ + RWLKE+ E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELRE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA + LVGN+ L R V T EA+ +A +N + F E S L N+ SF +L +
Sbjct: 116 HADANIVIELVGNKSDLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKN 175
Query: 235 ALQRNGMERLWRSNKVG-RKP 254
+ +L ++ VG KP
Sbjct: 176 IYEMISKHQLDTNDTVGSSKP 196
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 122/218 (55%), Gaps = 21/218 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K LL+GDS VGK +L RF D +ES + S G + +K T
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRT 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ +F + +WL+E++ +
Sbjct: 53 IELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRY 112
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A GV K+LVGN+ L + V A+ +A + Q+ F E S N+ ++F ++++
Sbjct: 113 ACEGVNKLLVGNKSDLTNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQI 172
Query: 236 LQRNGMERLWRSNKVGRKPLINFESFTELSRRALQRNG 273
R G + +N+ G K + +S+ Q NG
Sbjct: 173 KDRMGSSTV--NNQAGGKSTLKVGQGQNVSQ---QSNG 205
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL+K LL+GDS VGK +L RF D + S F + G + +K T
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLL---------LRFSEDSFTPS-FITTIG-----IDFKIRT 59
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W++ +E+H
Sbjct: 60 IELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQH 119
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+L+GN+ L + V + + A + + F E S N+ E+F L++
Sbjct: 120 ATESVNKMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDI 179
Query: 236 LQR 238
+R
Sbjct: 180 KKR 182
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 24/194 (12%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +F+ + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE---- 230
HA + ++ GN+ L R V+T +A+ A + ++F E S L FN+ ++F
Sbjct: 113 HADSNIVIMMAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFD 172
Query: 231 ----LSRRALQRNG 240
+S++AL G
Sbjct: 173 IYQIMSKKALAAQG 186
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F +
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNI 168
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 17/179 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF R D ++S + + T
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLS------RFTRNQFDLETKSTIG---------VEFAT 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
+++++GK++K +WDT+GQ R+ I +Y RG G L+VYDI +F+ I+RWLKE+
Sbjct: 52 RSMMIEGKKIKATIWDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELR 111
Query: 175 EHAP--GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA ++A +NQM+F E S L N+ E+ L
Sbjct: 112 NHADQQDISIMLVGNKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNL 170
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 24/195 (12%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ +YDYL K +L+GD+ VGK +LS RF R S+S + +
Sbjct: 4 SDDEYDYLFKVVLIGDAGVGKSNLLS------RFTRNEFSLESKSTIGA---------EF 48
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T +I +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT K SFD + RWLKE
Sbjct: 49 ATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKE 108
Query: 173 VEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+++HA + +LVGN+ L + VTT +A +A N ++F E S L + + E+F +
Sbjct: 109 LKDHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSI 168
Query: 232 --------SRRALQR 238
S++AL++
Sbjct: 169 LSEIYRLGSKKALEK 183
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 50
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 51 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 110
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA ++ F E S N+ ++F ++
Sbjct: 111 YASENVNKLLVGNKCDLTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAE 170
Query: 235 ALQRNG 240
R G
Sbjct: 171 IKNRMG 176
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|255645965|gb|ACU23471.1| unknown [Glycine max]
Length = 169
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 101/170 (59%), Gaps = 17/170 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL+K LL+GDS VGK +L RF DGS + F + G + +K
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLL------RFS----DGSFTTSFITTIG-----IDFKIR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI DGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W++ +E+
Sbjct: 56 TIEQDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ 115
Query: 176 HA-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFN 223
HA V K+LVGN+ + R V T + + A + + FFE S D N
Sbjct: 116 HASDNVNKILVGNKADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLN 165
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F +
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNI 168
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +W+ E++
Sbjct: 49 TLELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA R V T A+ YA + F E S N+ ++F ++
Sbjct: 109 YANDKVNKMLVGNKSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMA 166
>gi|358057810|dbj|GAA96312.1| hypothetical protein E5Q_02978 [Mixia osmundae IAM 14324]
Length = 264
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 16/189 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A QY LLK LL+GDS VGK +L RF D + S F + G +
Sbjct: 35 MAPNGQYHILLKMLLIGDSGVGKSCLL---------LRFCDDAWTPS-FITTVG-----I 79
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 80 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWH 139
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E+HA GV K+L+GN+ + +T ++ A + + + E S + N+ E+F
Sbjct: 140 ANIEQHASEGVNKLLIGNKCDWTEKKVITEQQGRELADELGVGYLETSAKTNINVEEAFF 199
Query: 230 ELSRRALQR 238
L+R R
Sbjct: 200 TLAREVKNR 208
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + M F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRVG 174
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 52 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 96
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 97 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 156
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 157 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 216
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 217 IYRIVSQKQMSDR 229
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ I+RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F +
Sbjct: 112 HADANIVIMLVGNKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNI 168
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + ++ GN+ L R V+T +A+ A + ++F E S L +N+ ++F
Sbjct: 113 HADSNIVIMMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAF 166
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 22/202 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQ 168
Query: 235 ALQRNGMERLWRSNKVGRKPLI 256
+R G + V KP +
Sbjct: 169 IKERMG------NTTVNNKPTV 184
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 RRPYDMLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + + F E S + ++ +F +L+
Sbjct: 108 DEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILAK 173
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVDYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ +A + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMADKKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +FD + RWLKE+ +
Sbjct: 53 TLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRD 112
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 113 HADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAF 166
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 16/179 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
++ +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 1 MSKDDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +F+ +DRWL
Sbjct: 46 EFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWL 105
Query: 171 KEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
KE+ +HA + +LVGN+ L R V T +A YA + ++F E S L N+ ++F
Sbjct: 106 KELRDHADHNIVIMLVGNKSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAF 164
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M +P +YDYL K +L+GDS VGK +LS RF R + S+S
Sbjct: 1 MSVRP----DDEYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---- 46
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ + T ++ DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ + SF+
Sbjct: 47 -----VEFATRSVQTDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFE 101
Query: 165 GIDRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFN 223
+RWLKE+ +HA + +LVGN+ L R VTT E + YA ++F E S L +
Sbjct: 102 NAERWLKELRDHADQNIVIMLVGNKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASH 161
Query: 224 IRESFTEL 231
+ E+F +
Sbjct: 162 VEEAFVRI 169
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 16/184 (8%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK +L RF D +ES + S G + +K TI
Sbjct: 5 DYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRTI 49
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ +F+ + +WL+E++ +A
Sbjct: 50 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYA 109
Query: 178 -PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V K+LVGN+ L R V T+ A+ YA + + F E S N+ ++F ++
Sbjct: 110 CENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIK 169
Query: 237 QRNG 240
R G
Sbjct: 170 SRMG 173
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D SE+ + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYSET-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+K SFD + +WL E+E
Sbjct: 49 TIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQWLTEIER 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + + F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKSDLQSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKARMG 174
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 53 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 112
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 113 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 172
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 173 IYRIVSQKQMSDR 185
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + LVGN+ L R V T EA+ +A++N + F E S L N+ SF +L
Sbjct: 116 HADANIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQL 172
>gi|449550450|gb|EMD41414.1| rab-type small GTP-binding protein [Ceriporiopsis subvermispora B]
Length = 209
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 105/179 (58%), Gaps = 16/179 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YD+L+K LL+GDS VGK +L RF D + S F + G + +K
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLL---------RFCDDAWTPS-FITTIG-----IDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W +E+
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQ 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
HA GV K+L+GN+ R VTT + + A + + F E S + + E+F L+R
Sbjct: 110 HASEGVNKILIGNKSDWTDKRAVTTEQGQELANELGIKFMETSAKINEGVEEAFFTLAR 168
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + LVGN+ L R V T EA +A++N + F E S L N+ SF +L
Sbjct: 116 HADANIVIELVGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQL 172
>gi|348517598|ref|XP_003446320.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis niloticus]
Length = 213
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLC------RFT----DNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+L+DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ SF I +W +V+
Sbjct: 48 KTLLIDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V K+LVGN+ R V T + A M FFE S + NI E+FT L+
Sbjct: 108 EYAPDKVQKILVGNKSDEVDKRQVATEQGVKLAKAYGMDFFETSAFTNHNITETFTRLAE 167
Query: 234 RALQRN 239
+ L N
Sbjct: 168 QVLAAN 173
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++YDYL K +L+GDS VGK ILS RF R + FC S K + +
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 51 TRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKEL 110
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K +AF E S L N+ ++F
Sbjct: 111 RDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAF 166
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 24/188 (12%)
Query: 56 QYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+YDYL K LL+G+S VGK +L ++ ++ P +D
Sbjct: 4 EYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVD------------------- 44
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI +DGK +KLQ+WDT+GQ RF TI SY +GA GI++ YDIT++ SF I+ W+
Sbjct: 45 FKIRTIEVDGKTIKLQIWDTAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMN 104
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
EVE+HA + ++LVGN+ + R V+T E + A + F E S N+ E+FT
Sbjct: 105 EVEKHASDNISRILVGNKSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTM 164
Query: 231 LSRRALQR 238
++R R
Sbjct: 165 MTREIKSR 172
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 17/191 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKSYDLLFKLLLIGDSGVGKTCILF---------RFSED-TFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T L GK++KLQ+WDT+GQ RF TI SY R A GI+LVYD+TN SFD I +WL+ +
Sbjct: 48 IKTFDLRGKKIKLQIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLRNI 107
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R ++ + E + + + F E S + NI +F EL+
Sbjct: 108 QEHAAEEVDKMILGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELA 167
Query: 233 RRALQRN-GME 242
L R G+E
Sbjct: 168 ESILDRTPGIE 178
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 24/187 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKY 106
+A Q+ YDYL K LL+G+S VGK +L ++ ES P +D
Sbjct: 1 MAFQQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVD-------------- 46
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+K T + GK VK+Q+WDT+GQ RF TI SY +GA GI+L YDIT+K SF I
Sbjct: 47 -----FKIRTFDMQGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDI 101
Query: 167 DRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
+ WL EVE+HA V ++LVGN+ L R VT E + A + F E S + N+
Sbjct: 102 ENWLAEVEKHASENVVRLLVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVD 161
Query: 226 ESFTELS 232
++F L+
Sbjct: 162 QAFMTLA 168
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + ++ GN+ L R V+ +A++ A K ++F E S L N+ ++F
Sbjct: 113 HADSNIVIMMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAF 166
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 16/208 (7%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 53 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA + +LVGN+ L R V T +++ +A KN ++F E S L N+ +F +
Sbjct: 113 HADANIVIMLVGNKSDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTE 172
Query: 235 ALQRNGMERLWRSNKVGRKPLINFESFT 262
+ + + V + P N ++ T
Sbjct: 173 IYHIVSQKTIVNDDHVAKVPTSNVQTIT 200
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + + F E S N+ ++F ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ SF+ + +WL+E++
Sbjct: 52 TIDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T SF+ + +WL E++
Sbjct: 49 TVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L N+ V T+ A+ +A + + F E S N+ ++F ++
Sbjct: 109 YANDSVCKLLVGNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGE 168
Query: 235 ALQRNG 240
++ G
Sbjct: 169 IKKKMG 174
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 24/192 (12%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S + + T T
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLDSKSTIG---------VEFATRT 53
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI + +FD + RWLKE+ +H
Sbjct: 54 VQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDH 113
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL---- 231
A + +LVGN+ L R V T A+ +A +N ++F E S L N+ +F +
Sbjct: 114 ADSNIVIMLVGNKSDLKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDI 173
Query: 232 ----SRRALQRN 239
S +AL +N
Sbjct: 174 YRIVSAKALDQN 185
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + ++ F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +FD + RWLKE+ +
Sbjct: 53 TLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRD 112
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F
Sbjct: 113 HADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAF 166
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 RRPYDMLFKLLLIGDSGVGKTCILY------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + + F E S + ++ +F +L+
Sbjct: 108 DEHASEDVVKMILGNKCDMSDRRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILAK 173
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 23/201 (11%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 135 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 179
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 180 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 239
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F +
Sbjct: 240 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI--- 296
Query: 235 ALQRNGMERLW-RSNKVGRKP 254
G R W R+ G +P
Sbjct: 297 ---LTGRHRAWPRAGWGGHQP 314
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V + A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSEKKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+ +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT K SFD + RWL+E+
Sbjct: 53 NLQIDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRG 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + ++VGN+ L R+V + ++ K ++F E S L N+ ++F
Sbjct: 113 HADANIVVMMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAF 166
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T SF+ + +WL E++
Sbjct: 49 TVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L N+ V T+ A+ +A + + F E S N+ ++F ++
Sbjct: 109 YANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAE 168
Query: 235 ALQRNG 240
++ G
Sbjct: 169 IKKKMG 174
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 50 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 109
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 110 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 169
Query: 235 ALQRNGMERLWR 246
+R G+E L++
Sbjct: 170 IKKRMGLEVLFQ 181
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 56 QYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+YDYL K LL+GDS VGK +L YLES +D
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVD------------------- 44
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ L+GK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL
Sbjct: 45 FKIRTVELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLN 104
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A V K+LVGN+ L + V T+ A+ +A + + F E S N+ ++F
Sbjct: 105 EIDRYASENVNKLLVGNKADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMT 164
Query: 231 LSRRALQRNGMERLWRSNK 249
++ R + SNK
Sbjct: 165 MAAEIKNRMASQPAMNSNK 183
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDSYLDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L N+ V T A+ +A + + F E S N+ ++F ++
Sbjct: 109 YASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMA 166
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 16/173 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ RF D + S + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLI---------IRFAED-NFNSTYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DGK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 KTIDVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
E+A GV ++L+GN+ + R V+ E A + + FFE S N+ E
Sbjct: 108 ENASAGVSRMLLGNKCDIEAKRKVSRETGEKLAKDHGIKFFETSAKSSINVEE 160
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 16/183 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+D +K L++GD+ VGK +L R+ D S++ F + G + +K
Sbjct: 8 FDMQIKLLMIGDTGVGKTCLL---------LRYANDSFSQT-FITTIG-----IDFKIKN 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LD KR+KLQ+WDT+GQ RF TI SY RGAQGILLVYD+T+K SF+ I W+ ++++H
Sbjct: 53 IDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQH 112
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+L+GN+ + +R V+ E A + + FFE S D N+ + F ++R
Sbjct: 113 ADVAVNKILIGNKCDMDEDREVSKEEGANLAAEYGIQFFETSAKNDINVEKGFITIAREV 172
Query: 236 LQR 238
R
Sbjct: 173 KDR 175
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + LVGN+ L R V T EA+ +A++N + F E S L N+ SF +L
Sbjct: 116 HADANIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQL 172
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 27/208 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A Q +YD+L K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 1 MAHQSEYDFLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ LDGK +KLQ+WDT+GQ RF TI SY RGA GI++V+D+T++ SF+ + +WL
Sbjct: 46 DFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQWL 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
E++ +A V K+LVGN+ L R V A+ +A + + F E S N+ ++F
Sbjct: 106 NEIDRYANENVNKLLVGNKTDLTSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFM 165
Query: 230 ELSRRALQRNGMERLWRSNKVGRKPLIN 257
++ N++ R+P +N
Sbjct: 166 TMAAEI-----------KNRMAREPAVN 182
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+V ++ YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 1 MVTSETLYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +W
Sbjct: 46 VDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQW 105
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L+E++ +A GV K+LVGN+ + + V A+ +A + F E S N+ ++F
Sbjct: 106 LQEIDRYATEGVNKLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAF 165
Query: 229 TELSRRALQRNG 240
++R+ +R G
Sbjct: 166 LTMARQIKERMG 177
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 52 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 96
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 97 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 156
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 157 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 216
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 217 IYRIVSQKQMSDR 229
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 16/188 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ QYDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 5 EDQYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFK 49
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI++ YD+T++ SF+ + +WL+E+
Sbjct: 50 IRTIELDGKVVKLQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEI 109
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+ +A V K+LVGN+ L + V A +A + + F E S N+ ++F +++
Sbjct: 110 DRYACENVNKLLVGNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMA 169
Query: 233 RRALQRNG 240
+ R G
Sbjct: 170 EDIMARMG 177
>gi|118369861|ref|XP_001018133.1| Ras family protein [Tetrahymena thermophila]
gi|5738166|gb|AAD50280.1|AF169950_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89299900|gb|EAR97888.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777806|dbj|BAJ21299.1| Rab-family small GTPase Rab8A [Tetrahymena thermophila]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 16/188 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+ ++ YD LLKFLL+GDS VGK L + +G+ S S G +
Sbjct: 1 MQNKQDYDTLLKFLLIGDSGVGKTCFLVN----------YCEGTFTSAHLSTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
YK +DGKRVKLQ+WDT+GQ RF TI ++Y +GA GI+L Y +T+ SF I W+
Sbjct: 46 DYKLKYEDIDGKRVKLQIWDTAGQERFRTITQNYYKGAMGIILAYSVTDPNSFKNIADWM 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
K++ E A P V K+++ ++ + R V+TRE E A + + FFE S NI E+F
Sbjct: 106 KQINERADPNVKKIIIATKIDMKDQRKVSTREGEELADRYGVKFFETSAKEGVNISEAFK 165
Query: 230 ELSRRALQ 237
++R+ L+
Sbjct: 166 CIARQTLE 173
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 16/193 (8%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P Q YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 3 PECCPQPPYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG---- 48
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +
Sbjct: 49 -VDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ 107
Query: 169 WLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
WL+E++ +A GV K+LVGN+ + + V A+ +A + F E S N+ ++
Sbjct: 108 WLQEIDRYATEGVNKLLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQA 167
Query: 228 FTELSRRALQRNG 240
F ++R+ +R G
Sbjct: 168 FLTMARQIKERMG 180
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 47 TKPVVATQKQ-YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGK 105
TK T+++ YDYL K +L+GDS VGK ILS RF R + S S
Sbjct: 4 TKTTATTEREDYDYLFKVVLIGDSGVGKSNILS------RFTRGEFNLESRSTIG----- 52
Query: 106 YDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDG 165
+ + T ++ + K VK Q+WDT+GQ R+ I +Y RGA G LLVYDI+ + SFD
Sbjct: 53 ----VEFATKSVRIGEKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDN 108
Query: 166 IDRWLKEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
RWLKE+ EHA + +LVGN+ L+ R + EAE + N + F E S L N+
Sbjct: 109 AARWLKELREHADSDIVVMLVGNKCDLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNV 168
Query: 225 RESFTELSRRALQRNGMERLWRSNKVGRKP 254
E+F +N +E +++ N P
Sbjct: 169 EEAF---------QNILEDIYKVNSSKPTP 189
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D S S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------VRFSED-SFNSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ S++ I W+K ++
Sbjct: 48 RTTEIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIK 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V E A ++ + FFE S N+ ESF L+
Sbjct: 108 ENASAGVERMLLGNKCDMENKRKVPKERGEKLAKEHGIRFFETSAKSSLNVDESFNTLAT 167
Query: 234 RALQR 238
L +
Sbjct: 168 DILMK 172
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L +S P F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTP----------SFITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI L GKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I W
Sbjct: 46 DFKIRTIDLGGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R V+T + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKMLIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 TLA 168
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + LVGN+ L R V T EA +A++N + F E S L N+ SF +L
Sbjct: 116 HADANIVIELVGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQL 172
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 16/197 (8%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
+ +P + +YDYL K LL+GDS VGK +L RF D +ES + S G
Sbjct: 18 FQGRPXSSXNPEYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG 67
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+
Sbjct: 68 -----VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFN 122
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFN 223
+ +WL+E++ +A V K+LVGN+ L + V A+ +A + F E S N
Sbjct: 123 NVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN 182
Query: 224 IRESFTELSRRALQRNG 240
+ +SF + +R G
Sbjct: 183 VEQSFXTXAAEIKKRXG 199
>gi|17555956|ref|NP_499454.1| Protein RAB-35 [Caenorhabditis elegans]
gi|6018411|emb|CAB57899.1| Protein RAB-35 [Caenorhabditis elegans]
Length = 209
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L K L++GDS VGK +L RF D + + + G +
Sbjct: 1 MAGTRDYDHLFKLLIIGDSGVGKSSLLL------RFA----DNTFSENYITTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ ++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL
Sbjct: 46 DFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWL 105
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E+E + V KVLVGN+ R V +A YA ++FFE S D N+ FT
Sbjct: 106 QEIENNCDSVQKVLVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFT 164
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S + N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 16/185 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
K+ D K LL+GDS VGK I+ RF D + F S G + +K
Sbjct: 3 NKKSDLFFKLLLIGDSGVGKTCIIF------RFA----DNTFNPSFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYD+TN+ SF I +WLK++
Sbjct: 48 IKTLELGGKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
++HA V ++LVGN+ + R ++ + E A ++F E S L + N+ +SF L+
Sbjct: 108 DDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLT 167
Query: 233 RRALQ 237
L
Sbjct: 168 EDILN 172
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 16/190 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLL------RFA----DDSYVDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T SF+ + +WL E++
Sbjct: 49 TVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L N+ V T+ A+ +A + + F E S N+ ++F ++
Sbjct: 109 YANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAE 168
Query: 235 ALQRNGMERL 244
++ G +L
Sbjct: 169 IKKKWGASQL 178
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A N ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQISDR 184
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 16/177 (9%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
T +YDYL K +L+GDS VGK +LS RF R + FC S K + +
Sbjct: 5 TDDEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEF 49
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T T+ ++GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +F+ + RWLKE
Sbjct: 50 ATRTVQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKE 109
Query: 173 VEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+ +HA + +LVGN+ L R V+T +A+ +A K ++F E S L N+ +F
Sbjct: 110 LRDHADSNIVIMLVGNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAF 166
>gi|410916821|ref|XP_003971885.1| PREDICTED: ras-related protein Rab-15-like [Takifugu rubripes]
Length = 213
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLC------RFT----DNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+L+DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ SF I +W +V+
Sbjct: 48 KTLLIDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V K+LVGN+ R V T + A M FFE S + NI E+FT L+
Sbjct: 108 EYAPEKVQKILVGNKSDEVEKRQVATAQGIKLATAYGMDFFETSAFTNHNITETFTRLAE 167
Query: 234 RALQRN 239
+ L N
Sbjct: 168 QVLAAN 173
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 24/196 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++YDYL + +L+GDS VGK +LS RF R + S+S + +
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFA 49
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ +DRWL+E+
Sbjct: 50 TRSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLREL 109
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
+HA + +LVGN+ L R V T EA+ +A +N ++F E S L N+ +F
Sbjct: 110 RDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNIL 169
Query: 229 TEL----SRRALQRNG 240
TE+ SR++L +G
Sbjct: 170 TEIYRIVSRKSLPDSG 185
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F ++
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQI 168
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+++YDYL K +L+GDS VGK +LS RF R + FC S K + +
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 51 TRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKEL 110
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ +F
Sbjct: 111 RDHADANIVIMLIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAF 166
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKY 106
+A Q+ YDYL K LL+G+S VGK +L ++ ES P +D
Sbjct: 1 MAFQQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVD-------------- 46
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+K T + GK VK+Q+WDT+GQ RF TI SY +GA GI+L YDIT+K SF I
Sbjct: 47 -----FKIRTFDMQGKSVKMQIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDI 101
Query: 167 DRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
+ WL EVE+HA V ++LVGN+ L R VT E + A + F E S + N+
Sbjct: 102 ENWLAEVEKHASENVVRLLVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVD 161
Query: 226 ESFTELSRRALQRNG 240
++F L+ + G
Sbjct: 162 QAFMTLANNIKAKIG 176
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFSTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ +F+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R + A ++ + F E S D NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKSDMEDKRVI--------AREHGIRFMETSAKADINIDRAFNELT 159
Query: 233 RRALQR 238
L++
Sbjct: 160 EAILEK 165
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+K SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ LA + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKSDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRMG 174
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRVG 177
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GD+ VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + M F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRVG 174
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 109/184 (59%), Gaps = 16/184 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V+T A+ +A + F E S N+ ++F ++ +
Sbjct: 109 YACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQ 168
Query: 235 ALQR 238
+R
Sbjct: 169 IKKR 172
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +D K VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+++
Sbjct: 52 SIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN+++F E S L N+ +F ++
Sbjct: 112 HADQNIVIMLVGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQI 168
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 103/181 (56%), Gaps = 16/181 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A ++YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 57 AKDEEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNMESKSTIG---------VE 101
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I + K +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +F+ +RWLK
Sbjct: 102 FATKSIQTENKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLK 161
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E+ +HA + +LVGN+ L RTV+ EA+ +A KN +AF E S L + +F +
Sbjct: 162 ELRDHAESNIVVMLVGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQ 221
Query: 231 L 231
+
Sbjct: 222 I 222
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 121/208 (58%), Gaps = 20/208 (9%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+++DYL K L++GDS VGK S L L RF D S++ + + G + +K
Sbjct: 3 QEFDYLFKILMIGDSGVGK----SCLLL-----RFSDDVFSDT-YITTIG-----VDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++G+ +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ I +WL E+E
Sbjct: 48 KTLKINGRDIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQWLNEIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A P V K+L+GN+ + V+T +A +A + M FFE S N+ +F EL++
Sbjct: 108 GNASPNVVKMLIGNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQ 167
Query: 234 RALQRNGMERLWR--SNKVGRKPLINFE 259
+N M+ R + V KP + E
Sbjct: 168 DI--KNQMKETPRVTPDNVAIKPEVQQE 193
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++YDYL K +L+GDS VGK +LS RF R + FC S K + +
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 51 TRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKEL 110
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + +L+GN+ L R V T +A+ YA K +AF E S L N+ ++F
Sbjct: 111 RDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAF 166
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRVG 177
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 101/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 50
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ + RWLKE+ +
Sbjct: 51 SINVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRD 110
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V+T EA+ +A +N ++F E S L N+ +F +
Sbjct: 111 HADANIVIMLVGNKSDLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNI 167
>gi|321470661|gb|EFX81636.1| hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex]
Length = 201
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 26/209 (12%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLL---------LRF-----ADNTF---SGNYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TILL+G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+++ SF + RWL E
Sbjct: 46 KIRTILLNGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+E++ V ++LVGN+ + + V T +A+ +A + + FE S + N+ E F ++
Sbjct: 106 IEQNCDVVNRILVGNKDDMPDRKVVLTEDAQRFASQMGIQLFETSAKDNKNVEEMFNAIT 165
Query: 233 RRAL--QRNGMERLWRSNKV-----GRKP 254
++ L ++ E+ +N GRKP
Sbjct: 166 QQVLLTKKEQKEQASNANDTITVGKGRKP 194
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 16/196 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K LL+GDS VGK +L RF D +ES + S G + +K T
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIRT 52
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ +F + +WL+E+E +
Sbjct: 53 IELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQWLQEIERY 112
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A GV K+LVGN+ L ++ V A+ A + +AF + S N+ ++F ++++
Sbjct: 113 ACEGVNKLLVGNKADLTNSKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQI 172
Query: 236 LQRNGMERLWRSNKVG 251
R G+ + + G
Sbjct: 173 KDRMGVSAMQNGSAGG 188
>gi|156373826|ref|XP_001629511.1| predicted protein [Nematostella vectensis]
gi|156216513|gb|EDO37448.1| predicted protein [Nematostella vectensis]
Length = 207
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 106/191 (55%), Gaps = 14/191 (7%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD++ K LL+GD++ GK +IL E + ++G+ SGK + +
Sbjct: 6 RNYDFMFKILLIGDTNTGKTKILCKYAGEDK-----INGNP-------SGKQTIGIDFML 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI + KR+KLQ+WDT+GQ RF TI +Y RGA GILLVYDIT +F+ + WL +
Sbjct: 54 KTITIKDKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDITQAKTFNSLPSWLSSIR 113
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V LVGN+ H R V E +A +++M F EVS D N+ E F L+
Sbjct: 114 EYAPANVVISLVGNKCHKQSKREVPVELGEQFAAEHEMRFREVSCEMDINVEEVFQILAE 173
Query: 234 RAL-QRNGMER 243
L QR E+
Sbjct: 174 DILSQREPTEK 184
>gi|340373098|ref|XP_003385079.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 219
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 108/188 (57%), Gaps = 16/188 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
AT K+YD+L + LL GDS VGK ++S RF D + G +
Sbjct: 4 ATDKKYDHLFQLLLCGDSSVGKTCLIS------RFA----DNEFRHTHINTIG-----ID 48
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K + K++++Q+WDT+GQ R+ T+ Y R AQGI+LVYDIT + +F + +WL+
Sbjct: 49 FKLKLFTIRDKKIRMQIWDTAGQERYETLTAQYYRKAQGIILVYDITREETFRNVTKWLR 108
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+E+H GV +L+GN++ L R ++TR + A ++ + FFE S D N+ E+FTE
Sbjct: 109 NIEDHGVKGVKIILIGNKVDLESERKISTRHGQKLANQHNIKFFETSAWKDINVTEAFTE 168
Query: 231 LSRRALQR 238
L+ + L +
Sbjct: 169 LAEQILAK 176
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y R A GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTINLDGKRVKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 16/176 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF R D S+S + + T
Sbjct: 8 HYDYLYKIVLIGDSGVGKSSLLS------RFTRNEFDIESKSTIG---------VEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK +K Q+WDT+GQ R+ I +Y RGA G +LVYD+T + +F ++RWL EV E
Sbjct: 53 SIQVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVRE 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
HA P + +LVGN+ L R V + +A+ Y ++ +AF E S L N+ E+F +
Sbjct: 113 HADPTIVVMLVGNKCDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQ 168
>gi|340506305|gb|EGR32473.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 211
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 18/187 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM-LAYKT 114
+YDYL K LL+G+S VGK +L RF SE+ F + Y+ + + +K
Sbjct: 8 EYDYLFKLLLIGNSGVGKSCML---------MRF-----SENQFTNNF--YNTIGVDFKI 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI L+GK +KLQ+WDT+GQ RF TI SY RGA GI +V+DIT+K SF+ + W+ E+E
Sbjct: 52 KTIQLNGKNIKLQIWDTAGQDRFKTITCSYYRGAHGIAVVFDITDKQSFENVKGWMVEIE 111
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
++A V ++LVGN+ + NR V +E + A + + EVS N+ + FT++++
Sbjct: 112 KYAQENVCRILVGNKTDMNENRQVQYQEGQELAQMYNLNYIEVSAKSGENVDQVFTQMAK 171
Query: 234 RALQRNG 240
+ +++ G
Sbjct: 172 QIMEKQG 178
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRVG 177
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 124 RYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 168
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 169 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 228
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 229 YATEGVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 288
Query: 235 ALQRNG 240
+R G
Sbjct: 289 IKERMG 294
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +F+ + RWL+E+ +
Sbjct: 53 TIQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + +L GN+ L R V++ +A+ A K ++F E S L N+ ++F
Sbjct: 113 HADSNIVIMLAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAF 166
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDSYLDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L N+ V T A+ +A + + F E S N++++F ++
Sbjct: 109 YASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMA 166
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 16/176 (9%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ DYL K +L+GDS VGK +LS R+ R + +S++ + ++
Sbjct: 6 EQSEDYLFKVVLIGDSAVGKSNLLS------RYARNEFNSNSKATIG---------VEFQ 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T ++ +DGK VK Q+WDT+GQ RF + +Y RGA G L+V+DIT + +F+ + RWL E+
Sbjct: 51 TQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDEL 110
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+ H+ V +LVGN+ LA R VT EA A N M+F E S L N+ E+F
Sbjct: 111 KVHSDSSVVVMLVGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAF 166
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 45 METKPVVATQKQY-DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGS 103
ME ++ T Y DYL K LL+GDS VGK +L RF D +ES + S
Sbjct: 1 MEPANILDTALSYIDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTI 50
Query: 104 GKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF 163
G + +K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF
Sbjct: 51 G-----VDFKIRTIELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESF 105
Query: 164 DGIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
+ + +WL+E++ +A V K+LVGN+ L + V A+ YA + ++ F E S
Sbjct: 106 NNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNAT 165
Query: 223 NIRESFTELSRRALQRNG 240
N+ ++F ++ R G
Sbjct: 166 NVEQAFMTMAAEIKNRMG 183
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y R A GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTINLDGKRVKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRVG 177
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + ++ GN+ L R V+T +A+ A + ++F E S L +N+ ++F
Sbjct: 113 HADSNIVIMMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAF 166
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ + + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 3 AREDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWL+
Sbjct: 48 FATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E+ +HA + +LVGN+ L R+V T EA+++A +N ++F E S L N+ +F
Sbjct: 108 ELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQN 167
Query: 231 L 231
+
Sbjct: 168 I 168
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 101/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 50
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ + RWLKE+ +
Sbjct: 51 SINVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRD 110
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V+T EA+ +A +N ++F E S L N+ +F +
Sbjct: 111 HADANIVIMLVGNKSDLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNI 167
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 105/182 (57%), Gaps = 16/182 (8%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK +L RF D +ES + S G + +K TI
Sbjct: 35 DYLFKLLLIGDSGVGKSSLL---------LRFADDTYTES-YISTIG-----VDFKIRTI 79
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL E++ +A
Sbjct: 80 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYA 139
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V K+LVGN+ L R VTT + + +A + F E S N+ ++F ++ +
Sbjct: 140 AENVNKLLVGNKCDLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIK 199
Query: 237 QR 238
R
Sbjct: 200 AR 201
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + + F S G + +K
Sbjct: 3 KKSYDLLFKLLLIGDSGVGKTCILF---------RFSED-TFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T L GK++KLQ+WDT+GQ RF TI SY R A GI+LVYD+TN SFD I +WL+ +
Sbjct: 48 IKTFELRGKKIKLQIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNI 107
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R ++ + E + + + F E S + NI +F +L+
Sbjct: 108 QEHAAEEVDKMILGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLA 167
Query: 233 RRALQR 238
L+R
Sbjct: 168 ESILER 173
>gi|198430272|ref|XP_002128387.1| PREDICTED: similar to Rab35 [Ciona intestinalis]
Length = 203
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 19/185 (10%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
++YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLL---------LRF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI + G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+ + SF + RWL E
Sbjct: 46 KIRTIEIGGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVQSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+E++ V ++LVGN+ A + V T +A+ ++ + + FE S + NI E FTE++
Sbjct: 106 IEQNCDSVNRILVGNKDDCAEKKVVETADAKKFSDQINITLFETSAKENKNIEEMFTEIT 165
Query: 233 RRALQ 237
R+ L+
Sbjct: 166 RQVLR 170
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTTKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCL---------LRFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y R A GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTINLDGKRVKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWF 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VT + + A + + F EVS + N+ ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 SLA 168
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L ++DGS F S G + +K
Sbjct: 3 KKSYDALFKLLLIGDSGVGKTCLLIR----------YVDGSYSPSFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L+GK++KLQ+WDT+GQ RF TI SY RGA G +++YDITN+ +FD I W+K +
Sbjct: 48 IKTIELEGKKIKLQIWDTAGQERFHTITTSYYRGAMGRMMIYDITNRRTFDNIQTWMKNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
++A V K++VGN+ R V+ E A +++ F E S + N+ ++F EL+
Sbjct: 108 CDYASEDVEKLVVGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELT 167
Query: 233 RRALQR 238
L++
Sbjct: 168 LAILRK 173
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 16/180 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D ++ + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFAEDTYTQ-DYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ +++WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L + V A+ +A ++ E S L N+ ++F ++R+
Sbjct: 109 YATGGVMKLLVGNKSDLKDKKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQ 168
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+DY +K LL+GDS VGK +L RF D S + F + G + +K T
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLL------RFS----DDSFTTSFITTIG-----IDFKIRT 57
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDG+RVKLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T++ SF+ I W+K +E++
Sbjct: 58 IELDGRRVKLQVWDTAGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQN 117
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V +VLVGN+ + R VTT + + A + + FFE S N+ E+F ++R
Sbjct: 118 ASENVSRVLVGNKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARD 177
Query: 235 ALQR 238
+R
Sbjct: 178 IKRR 181
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L + V A+ YA ++ M F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMA 166
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 20/192 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + +YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 3 AREDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWL+
Sbjct: 48 FATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R+V T EA+++A +N ++F E S L N+ +F
Sbjct: 108 ELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQN 167
Query: 229 --TELSRRALQR 238
TE+ R Q+
Sbjct: 168 ILTEIYRIVSQK 179
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 19/204 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----ENTYTQDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ +++WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNDVNQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L + V A+ +A + F E S N+ ++F +S++
Sbjct: 109 YATSGVQKLLVGNKCDLTDKKVVDYAVAKEFADSRGIPFIETSAAESTNVEQAFILMSKQ 168
Query: 235 ALQRNGMERLWRSNKVGRKPLINF 258
+ + +N KP +N
Sbjct: 169 IKAQMASQ---PTNNAAGKPSVNL 189
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 16/200 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DG+RVK Q+WDT+GQ R+ I +Y RGA G L+VYDI+ S++ + RWLKE++E
Sbjct: 56 TLEIDGRRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKE 115
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA + LVGN+ L R V T EA+ +A +N + F E S L N+ SF +L +
Sbjct: 116 HADTNIVIELVGNKSDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKN 175
Query: 235 ALQRNGMERLWRSNKVGRKP 254
+ +L +++ +KP
Sbjct: 176 IYEMISKHQLDTNDQGAQKP 195
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLDS-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRD 112
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
HA + +L GN+ L R+V+ +A+ A K ++F E S L N+ ++F
Sbjct: 113 HADSNIVIMLAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAF 166
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 27/206 (13%)
Query: 56 QYDYLLKFLLVGDSDVGKQEIL----SGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
+YDYL K LL+GDS VGK +L YLES +D
Sbjct: 4 EYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVD------------------- 44
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL
Sbjct: 45 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLS 104
Query: 172 EVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A V K+LVGN+ L + V+T A+ +A + + F E S N+ ++F
Sbjct: 105 EIDRYASDNVNKLLVGNKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMA 164
Query: 231 LSRRALQRNGMERLWRSNKVGRKPLI 256
++ A +N M SN R P +
Sbjct: 165 MA--ASIKNRMASQPASNN-ARPPTV 187
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA+ +A KN ++F E S L N+ +F +
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNI 168
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 20/192 (10%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + +YDYL K +L+GDS VGK +LS RF R + S S +
Sbjct: 3 AREDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESNSTIG---------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWL+
Sbjct: 48 FATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R+V T EA+++A +N ++F E S L N+ +F
Sbjct: 108 ELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQN 167
Query: 229 --TELSRRALQR 238
TE+ R Q+
Sbjct: 168 ILTEIYRIVSQK 179
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 110/186 (59%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ L + V T +A+ +A + E S N+ ++F ++++
Sbjct: 109 YAAEGVNKLLVGNKSDLVDKKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQ 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKDRMG 174
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 24/199 (12%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A YDYL K +L+GDS VGK +LS RF R + S+S +
Sbjct: 1 MAEGSNYDYLFKIVLIGDSGVGKSNLLS------RFTRNEFNLESKSTIG---------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT S+ + RWL
Sbjct: 46 EFATRSINVDGKTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWL 105
Query: 171 KEVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
KE+ +HA + +LVGN+ L R V T EA+ ++ +N ++F E S L N+ +F
Sbjct: 106 KELRDHADANIVIMLVGNKSDLKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQ 165
Query: 230 E--------LSRRALQRNG 240
+SR+ L++N
Sbjct: 166 TTLTDIYRIVSRQTLEQNA 184
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 17/184 (9%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+DY +K LL+GDS VGK +L RF D S + F + G + +K T
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLL------RFS----DDSFTTSFITTIG-----IDFKIRT 57
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDG+RVKLQ+WDT+GQ RF TI +Y RGA GI+LVYD+T++ SF+ I W+K +E++
Sbjct: 58 IELDGRRVKLQVWDTAGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQN 117
Query: 177 A-PGVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
A V +VLVGN+ + R VTT + + A + + FFE S N+ E+F ++R
Sbjct: 118 ASENVSRVLVGNKADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETFFAIARD 177
Query: 235 ALQR 238
+R
Sbjct: 178 IKRR 181
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 8 EYDFLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +FD + RWL+E+ +
Sbjct: 53 TIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRD 112
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L+ R V +A+ +A K ++F E S L N+ +SF +
Sbjct: 113 HADSNIVIMLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSI 169
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 16/195 (8%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P ++YD+L K +L+G+S VGK +L Y E+ F + F + G
Sbjct: 1 MNNTPYQEQSQEYDHLFKLVLIGNSGVGKSCMLM-RYAENTFTQ---------NFYNTIG 50
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K TI L GK++KLQ+WDT+GQ RF TI +Y RGA GI++VYD+T+K SF+
Sbjct: 51 -----VDFKIKTINLQGKQIKLQIWDTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFE 105
Query: 165 GIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFN 223
+ W+ E+E++A V K+L+GN+ L+ R V+T E + A ++ F E S N
Sbjct: 106 NVKTWMSEIEKYAQENVCKLLIGNKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNN 165
Query: 224 IRESFTELSRRALQR 238
I +F +++ L R
Sbjct: 166 IDSAFESMAQDVLIR 180
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLDSRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI+ S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKE 115
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
HA + LVGN+ L R V T EA+ +A +N + F E S L N+ SF +L +
Sbjct: 116 HADANIVIELVGNKSDLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKN 175
Query: 235 ALQRNGMERLWRSNKVGRKP 254
+ +L ++ KP
Sbjct: 176 IYEMISKHQLETDDQPSAKP 195
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 22/202 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNGMERLWRSNKVGRKPLI 256
+R G + V KP +
Sbjct: 169 IKERMG------NTTVNNKPTV 184
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ + + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIER 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V + A+ YA + + F E S N+ ++F ++
Sbjct: 109 YACDNVNKLLVGNKSDLTTKKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAH 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKLRVG 174
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 8 EYDFLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT +FD + RWL+E+ +
Sbjct: 53 TIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRD 112
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L+ R V +A+ +A K ++F E S L N+ +SF +
Sbjct: 113 HADSNIVIMLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSI 169
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ Y + + F E S N+ ++F ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRMG 177
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D S S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLI---------VRFSED-SFNSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ S++ I W+K ++
Sbjct: 48 RTTEIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIK 107
Query: 175 EH-APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+ A GV ++L+GN+ + R V E A ++ + FFE S N+ E+F L+R
Sbjct: 108 ENAAAGVERMLLGNKCDMENKRKVPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLAR 167
Query: 234 RALQR 238
L +
Sbjct: 168 DILMK 172
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDSYIES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ LA NR V A+ +A + + F E S N+ ++F ++
Sbjct: 109 YASDSVNKLLVGNKCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMA 166
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 22/202 (10%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ ++ + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNGMERLWRSNKVGRKPLI 256
+R G + V KP +
Sbjct: 169 IKERMG------NTTVNNKPTV 184
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 111/191 (58%), Gaps = 16/191 (8%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
VA +YDYL K LL+GDS VGK +L RF D +ES + S G +
Sbjct: 900 VANNFRYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----V 944
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL
Sbjct: 945 DFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWL 1004
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E++ +A GV K+LVGN+ + + V A+ +A + F E S N+ ++F
Sbjct: 1005 QEIDRYATEGVNKLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFL 1064
Query: 230 ELSRRALQRNG 240
++R+ +R G
Sbjct: 1065 TMARQIKERMG 1075
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL---------RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E+
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIAR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ YA + M F E S N+ ++F ++
Sbjct: 109 YACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNVTNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
R G
Sbjct: 169 IKNRVG 174
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 118/212 (55%), Gaps = 18/212 (8%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L K LL+GDS VGK +L RF D + S + S G + +K T
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLL------RFA----DDTYTSSYISTIG-----VDFKIRT 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I +DGK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SFD + +WL+E++ +
Sbjct: 50 IEIDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRY 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A GV K+LVGN+ L ++V A+ +A + + F E S N+ ++F +++
Sbjct: 110 ACEGVNKLLVGNKNDLESKKSVEFNVAKEFAEQLNIPFLETSAKDSTNVEQAFLTMAKHI 169
Query: 236 LQRNGMERLWRSNKVGRKPLINFESFTELSRR 267
R G + + G K + S +L ++
Sbjct: 170 KDRMGTNSV--GSGAGTKSGVKLSSGQQLDQQ 199
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLL------RFA----DDSYLDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L N+ V T A+ +A + + F E S N+ ++F ++
Sbjct: 109 YASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMA 166
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 16/186 (8%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 39 EYDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKIR 83
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 84 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 143
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 144 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 203
Query: 235 ALQRNG 240
+R G
Sbjct: 204 IKKRMG 209
>gi|145552362|ref|XP_001461857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834352|emb|CAI44523.1| rab_B52 [Paramecium tetraurelia]
gi|124429693|emb|CAK94484.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 25/189 (13%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM----L 110
+ YD+L+K +++GDS VGK +LS FC M +
Sbjct: 8 QDYDWLVKVIVIGDSGVGKTNVLS-------------------QFCDQKFSITHMATLGV 48
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI +GK++KLQ+WDT+GQ RF TI ++Y +GAQG++L Y + ++ SF +D WL
Sbjct: 49 DFKIKTIEAEGKKLKLQIWDTAGQERFRTITKTYYKGAQGVILTYSVIDRQSFQNVDGWL 108
Query: 171 KEVEE--HAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
K ++E ++ V VL+GN+ ++ R VT E + + + FFE S + NI E+F
Sbjct: 109 KSIQENTNSSDVQLVLLGNKADMSAERKVTLEEGMKLSQQFNIPFFETSAKSNMNINEAF 168
Query: 229 TELSRRALQ 237
ELS+R +Q
Sbjct: 169 QELSQRIIQ 177
>gi|62858521|ref|NP_001016372.1| RAB15, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267008|emb|CAJ81786.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213624493|gb|AAI71178.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213625715|gb|AAI71180.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
Length = 212
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 104/183 (56%), Gaps = 16/183 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC------RFT----DNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ S+ I +W +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSYQHIMKWASDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + A + M FFE S ++NI+ESFT L+
Sbjct: 108 EYAPDGVQKILIGNKADEEQKRQVGKNQGMKLAEEYGMDFFETSACTNYNIKESFTRLTE 167
Query: 234 RAL 236
L
Sbjct: 168 LVL 170
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
Y+YL K +L+GDS VGK +LS RF R + S S + + T
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTIG---------VEFATR 55
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++E
Sbjct: 56 TLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKE 115
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + LVGN+ L R V T EA+ +A +N + F E S L N+ SF +L
Sbjct: 116 HADSNIVIELVGNKSDLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQL 172
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 16/187 (8%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+Q+DYL K LL+GDS VGK +L RF D +ES + S G + +K
Sbjct: 4 QQHDYLFKLLLIGDSGVGKSCLL---------LRFADDTYTES-YISTIG-----VDFKI 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 RTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID 108
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 109 RYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAA 168
Query: 234 RALQRNG 240
+R G
Sbjct: 169 EIKKRMG 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,670,616,809
Number of Sequences: 23463169
Number of extensions: 275044845
Number of successful extensions: 756159
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12765
Number of HSP's successfully gapped in prelim test: 6546
Number of HSP's that attempted gapping in prelim test: 712476
Number of HSP's gapped (non-prelim): 30370
length of query: 432
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 287
effective length of database: 8,957,035,862
effective search space: 2570669292394
effective search space used: 2570669292394
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)