Your job contains 1 sequence.
>psy3450
METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGYKLELTAWLMETKPVVATQKQYDYL
LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD
GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGV
PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG
MERLWRSNKVGRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAGLVRP
SVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKSYAMTSYTTM
TMTTSARQHTKKLRFPSAQSTHSLLDTPSPSAATASLVSCGTGGASSASVKVSHSQKSKH
SSCVGRNSCVVS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3450
(432 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030391 - symbol:Rab40 "Rab40" species:7227 "Droso... 750 3.1e-83 2
UNIPROTKB|F1P5F8 - symbol:RAB40C "Uncharacterized protein... 706 2.8e-80 2
ZFIN|ZDB-GENE-030515-1 - symbol:rab40c "RAB40c, member RA... 705 3.6e-80 2
UNIPROTKB|A2VDR1 - symbol:RAB40C "Uncharacterized protein... 703 5.8e-80 2
UNIPROTKB|Q96S21 - symbol:RAB40C "Ras-related protein Rab... 703 5.8e-80 2
MGI|MGI:2183454 - symbol:Rab40c "Rab40c, member RAS oncog... 703 5.8e-80 2
RGD|727914 - symbol:Rab40c "Rab40c, member RAS oncogene f... 703 5.8e-80 2
ZFIN|ZDB-GENE-040718-257 - symbol:rab40b "RAB40B, member ... 688 5.9e-78 2
UNIPROTKB|F1NPF9 - symbol:RAB40B "Uncharacterized protein... 690 7.5e-78 2
UNIPROTKB|Q12829 - symbol:RAB40B "Ras-related protein Rab... 675 1.8e-76 2
UNIPROTKB|H3BNV8 - symbol:RAB40C "Ras-related protein Rab... 703 4.6e-76 2
UNIPROTKB|A6QQY0 - symbol:RAB40B "Uncharacterized protein... 667 2.0e-75 2
RGD|1305663 - symbol:Rab40b "Rab40b, member RAS oncogene ... 665 2.0e-75 2
MGI|MGI:2183451 - symbol:Rab40b "Rab40b, member RAS oncog... 664 6.7e-75 2
UNIPROTKB|F1S008 - symbol:LOC100522636 "Uncharacterized p... 650 2.0e-73 2
UNIPROTKB|Q8WXH6 - symbol:RAB40A "Ras-related protein Rab... 619 1.1e-70 2
UNIPROTKB|P0C0E4 - symbol:RAB40AL "Ras-related protein Ra... 616 6.0e-70 2
UNIPROTKB|H3BTC6 - symbol:RAB40C "Ras-related protein Rab... 699 6.3e-69 1
UNIPROTKB|H3BPA5 - symbol:RAB40C "Ras-related protein Rab... 394 6.4e-66 3
UNIPROTKB|J9NU44 - symbol:J9NU44 "Uncharacterized protein... 496 2.6e-57 2
UNIPROTKB|H3BME4 - symbol:RAB40C "Ras-related protein Rab... 585 7.5e-57 1
UNIPROTKB|F1S151 - symbol:F1S151 "Uncharacterized protein... 269 6.4e-50 3
UNIPROTKB|I3LUW8 - symbol:I3LUW8 "Uncharacterized protein... 366 1.8e-44 2
UNIPROTKB|H0YFJ5 - symbol:RAB40B "Ras-related protein Rab... 407 5.5e-38 1
UNIPROTKB|I3L5L9 - symbol:RAB13 "Uncharacterized protein"... 352 3.7e-32 1
UNIPROTKB|F1RFW5 - symbol:RAB13 "Uncharacterized protein"... 341 5.4e-31 1
RGD|620880 - symbol:Rab13 "RAB13, member RAS oncogene fam... 341 5.4e-31 1
TAIR|locus:2075251 - symbol:RABE1c species:3702 "Arabidop... 341 5.4e-31 1
UNIPROTKB|F1NI30 - symbol:RAB10 "Ras-related protein Rab-... 306 7.7e-31 2
WB|WBGene00004272 - symbol:rab-8 species:6239 "Caenorhabd... 339 8.8e-31 1
UNIPROTKB|G5EFC1 - symbol:rab-8 "Rab8" species:6239 "Caen... 339 8.8e-31 1
TAIR|locus:2084056 - symbol:RAB8 "RAB GTPase homolog 8" s... 337 1.4e-30 1
MGI|MGI:1927232 - symbol:Rab13 "RAB13, member RAS oncogen... 336 1.8e-30 1
UNIPROTKB|A4FV54 - symbol:RAB8A "Ras-related protein Rab-... 335 2.3e-30 1
UNIPROTKB|P61007 - symbol:RAB8A "Ras-related protein Rab-... 335 2.3e-30 1
UNIPROTKB|P61006 - symbol:RAB8A "Ras-related protein Rab-... 335 2.3e-30 1
UNIPROTKB|F2Z5I8 - symbol:RAB8A "Uncharacterized protein"... 335 2.3e-30 1
UNIPROTKB|Q4R5P1 - symbol:RAB8A "Ras-related protein Rab-... 335 2.3e-30 1
MGI|MGI:96960 - symbol:Rab8a "RAB8A, member RAS oncogene ... 335 2.3e-30 1
RGD|621144 - symbol:Rab8a "RAB8A, member RAS oncogene fam... 335 2.3e-30 1
ZFIN|ZDB-GENE-070424-36 - symbol:rab8a "RAB8A, member RAS... 335 2.3e-30 1
ZFIN|ZDB-GENE-070620-16 - symbol:rab8b "RAB8B, member RAS... 335 2.3e-30 1
UNIPROTKB|Q58DS5 - symbol:RAB13 "Ras-related protein Rab-... 334 3.0e-30 1
UNIPROTKB|P22127 - symbol:P22127 "Ras-related protein Rab... 334 3.0e-30 1
UNIPROTKB|Q5R4A3 - symbol:RAB8A "Ras-related protein Rab-... 334 3.0e-30 1
UNIPROTKB|E1C080 - symbol:RAB8B "Uncharacterized protein"... 333 3.8e-30 1
TAIR|locus:2168103 - symbol:AT5G59840 species:3702 "Arabi... 333 3.8e-30 1
UNIPROTKB|F1N2J9 - symbol:RAB8B "Ras-related protein Rab-... 332 4.9e-30 1
UNIPROTKB|Q2HJI8 - symbol:RAB8B "Ras-related protein Rab-... 332 4.9e-30 1
UNIPROTKB|Q92930 - symbol:RAB8B "Ras-related protein Rab-... 332 4.9e-30 1
UNIPROTKB|Q5REC9 - symbol:RAB8B "Ras-related protein Rab-... 332 4.9e-30 1
ZFIN|ZDB-GENE-040718-2 - symbol:rab15 "RAB15, member RAS ... 310 5.3e-30 2
UNIPROTKB|P51153 - symbol:RAB13 "Ras-related protein Rab-... 331 6.2e-30 1
UNIPROTKB|H0YNE9 - symbol:RAB8B "Ras-related protein Rab-... 330 7.9e-30 1
MGI|MGI:2442982 - symbol:Rab8b "RAB8B, member RAS oncogen... 330 7.9e-30 1
RGD|628764 - symbol:Rab8b "RAB8B, member RAS oncogene fam... 330 7.9e-30 1
UNIPROTKB|P70550 - symbol:Rab8b "Ras-related protein Rab-... 330 7.9e-30 1
FB|FBgn0015789 - symbol:Rab10 "Rab10" species:7227 "Droso... 329 1.0e-29 1
UNIPROTKB|Q5F470 - symbol:RAB8A "Ras-related protein Rab-... 329 1.0e-29 1
ZFIN|ZDB-GENE-030826-30 - symbol:rab13 "RAB13, member RAS... 329 1.0e-29 1
UNIPROTKB|Q5KTJ6 - symbol:RAB13 "Ras-related protein Rab-... 328 1.3e-29 1
UNIPROTKB|B4DEK7 - symbol:RAB8A "cDNA FLJ53028, highly si... 326 2.1e-29 1
TAIR|locus:2142684 - symbol:RAB8C "RAB GTPase homolog 8C"... 326 2.1e-29 1
ZFIN|ZDB-GENE-040718-304 - symbol:rab10 "RAB10, member RA... 326 2.1e-29 1
ASPGD|ASPL0000069804 - symbol:srgA species:162425 "Emeric... 325 2.7e-29 1
TAIR|locus:2085089 - symbol:RABE1e "RAB GTPase homolog E1... 325 2.7e-29 1
UNIPROTKB|F1PTE3 - symbol:RAB13 "Uncharacterized protein"... 324 3.4e-29 1
UNIPROTKB|J9NUV0 - symbol:RAB10 "Ras-related protein Rab-... 324 3.4e-29 1
UNIPROTKB|A6QLS9 - symbol:RAB10 "RAB10 protein" species:9... 323 4.4e-29 1
UNIPROTKB|F2Z4P9 - symbol:RAB10 "Ras-related protein Rab-... 323 4.4e-29 1
UNIPROTKB|P61026 - symbol:RAB10 "Ras-related protein Rab-... 323 4.4e-29 1
UNIPROTKB|F2Z5F2 - symbol:RAB10 "Uncharacterized protein"... 323 4.4e-29 1
UNIPROTKB|Q5R5U1 - symbol:RAB10 "Ras-related protein Rab-... 323 4.4e-29 1
MGI|MGI:105066 - symbol:Rab10 "RAB10, member RAS oncogene... 323 4.4e-29 1
POMBASE|SPAC18G6.03 - symbol:ypt3 "GTPase Ypt3" species:4... 323 4.4e-29 1
WB|WBGene00004266 - symbol:rab-1 species:6239 "Caenorhabd... 323 4.4e-29 1
FB|FBgn0262518 - symbol:Rab8 "Rab8" species:7227 "Drosoph... 322 5.6e-29 1
UNIPROTKB|Q5ZIT5 - symbol:RAB10 "Ras-related protein Rab-... 322 5.6e-29 1
UNIPROTKB|P24409 - symbol:RAB10 "Ras-related protein Rab-... 322 5.6e-29 1
POMBASE|SPAC9E9.07c - symbol:ypt2 "GTPase Ypt2" species:4... 322 5.6e-29 1
UNIPROTKB|J9NWR1 - symbol:RAB8A "Ras-related protein Rab-... 321 7.1e-29 1
DICTYBASE|DDB_G0280043 - symbol:rab8A "Rab GTPase" specie... 320 9.1e-29 1
SGD|S000001856 - symbol:YPT1 "Rab family GTPase" species:... 320 9.1e-29 1
UNIPROTKB|E9PU16 - symbol:Rab1 "Protein Rab1" species:101... 261 1.7e-28 2
UNIPROTKB|F5GY21 - symbol:RAB8B "Ras-related protein Rab-... 317 1.9e-28 1
RGD|735172 - symbol:Rab15 "RAB15, member RAS oncogene fam... 317 1.9e-28 1
WB|WBGene00004274 - symbol:rab-11.1 species:6239 "Caenorh... 316 2.4e-28 1
UNIPROTKB|O01803 - symbol:rab-11.1 "Protein RAB-11.1" spe... 316 2.4e-28 1
CGD|CAL0001430 - symbol:YPT1 species:5476 "Candida albica... 315 3.1e-28 1
DICTYBASE|DDB_G0276399 - symbol:rab8B "Rab GTPase" specie... 315 3.1e-28 1
UNIPROTKB|Q5AI00 - symbol:YPT1 "Likely RAB family GTP bin... 315 3.1e-28 1
UNIPROTKB|Q5F3R8 - symbol:RAB11B "Uncharacterized protein... 314 3.9e-28 1
UNIPROTKB|Q3MHP2 - symbol:RAB11B "Ras-related protein Rab... 314 3.9e-28 1
UNIPROTKB|J9JHN1 - symbol:RAB11B "Uncharacterized protein... 314 3.9e-28 1
UNIPROTKB|P59190 - symbol:RAB15 "Ras-related protein Rab-... 314 3.9e-28 1
UNIPROTKB|Q15907 - symbol:RAB11B "Ras-related protein Rab... 314 3.9e-28 1
UNIPROTKB|F2Z5J9 - symbol:RAB11B "Uncharacterized protein... 314 3.9e-28 1
MGI|MGI:99425 - symbol:Rab11b "RAB11B, member RAS oncogen... 314 3.9e-28 1
RGD|68369 - symbol:Rab11b "RAB11B, member RAS oncogene fa... 314 3.9e-28 1
ZFIN|ZDB-GENE-040426-2860 - symbol:rab11ba "RAB11B, membe... 314 3.9e-28 1
WARNING: Descriptions of 1424 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030391 [details] [associations]
symbol:Rab40 "Rab40" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0031982
"vesicle" evidence=ISS] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00969
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0008360
GO:GO:0015031 EMBL:AE014298 GO:GO:0005622 eggNOG:COG1100
HSSP:P07560 GeneTree:ENSGT00700000104049 KO:K07928 OMA:ELCCRTI
EMBL:BT015987 RefSeq:NP_727611.1 UniGene:Dm.148 SMR:Q8IR80
EnsemblMetazoa:FBtr0073669 GeneID:32195 KEGG:dme:Dmel_CG1900
UCSC:CG1900-RB CTD:32195 FlyBase:FBgn0030391 InParanoid:Q8IR80
OrthoDB:EOG42Z360 GenomeRNAi:32195 NextBio:777336 Uniprot:Q8IR80
Length = 265
Score = 750 (269.1 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 161/258 (62%), Positives = 183/258 (70%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML---A 111
K YDYLLK LLVGDSDVGK EILS L D S+ESPFCSG+ +L A
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILSNLE----------DPSTESPFCSGNDCTSHILQTVA 55
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
YKTTTILL+GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSFDGIDRWLK
Sbjct: 56 YKTTTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLK 115
Query: 172 EVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
EV+EHAPG+PKVLVGNRLHLAF R V ++AE YA +N M+ FE+SPLC+FNIRESF EL
Sbjct: 116 EVDEHAPGIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCEL 175
Query: 232 SRRALQRNGMERLWRSNKV-GRKPLINFESFTELSRRALQRNGMERLWRSNKGKHLLTYF 290
+R AL RNGME +WRSNKV + L S A+ + +S + LT
Sbjct: 176 ARMALHRNGMEHIWRSNKVLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYALTTS 235
Query: 291 QYCFAGLVRPSVDVNKNK 308
Q CF L + S N+ K
Sbjct: 236 Q-CFNSLTQSSKSKNRCK 252
Score = 141 (54.7 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 294 FAGLVRPSVDVNKNKYNLLSFSVISLQELCCRAIVARTTVYAINQLPLPNLIKSHLKXXX 353
F L R ++ N ++ S V+SLQELCCR IV RT+VYAI+ LPLP +KS LK
Sbjct: 172 FCELARMALHRNGMEHIWRSNKVLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYA 231
Query: 354 XXXXXXXXXXXXXRQHTKKLRFPSAQSTHS 383
+ + + P++ S +S
Sbjct: 232 LTTSQCFNSLTQSSKSKNRCKTPTSSSRNS 261
Score = 103 (41.3 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 21/24 (87%), Positives = 21/24 (87%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
K YDYLLK LLVGDSDVGK EILS
Sbjct: 6 KDYDYLLKVLLVGDSDVGKHEILS 29
>UNIPROTKB|F1P5F8 [details] [associations]
symbol:RAB40C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00700000104049
OMA:ELCCRTI EMBL:AADN02049451 EMBL:AADN02049452 IPI:IPI00955555
Ensembl:ENSGALT00000003084 Uniprot:F1P5F8
Length = 281
Score = 706 (253.6 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 138/196 (70%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG+SESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGASESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 119 (46.9 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 223
Score = 104 (41.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>ZFIN|ZDB-GENE-030515-1 [details] [associations]
symbol:rab40c "RAB40c, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030515-1 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:BX470132 EMBL:BC115347 IPI:IPI00506775
RefSeq:NP_001035438.1 UniGene:Dr.77273 Ensembl:ENSDART00000087047
GeneID:678600 KEGG:dre:678600 InParanoid:Q1RLP4 NextBio:20902420
Uniprot:Q1RLP4
Length = 279
Score = 705 (253.2 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 138/196 (70%), Positives = 156/196 (79%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DGS+ESP+ SG + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILDSLQ----------DGSAESPYAYSSG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW++E++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME+ WR N+V
Sbjct: 174 VLMRHGMEKFWRPNRV 189
Score = 119 (46.9 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLK 223
Score = 104 (41.7 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 102 (41.0 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 225 RESFTELSRRALQRNGMERLWRSNKVGRKPLINF---ESFTELSRRALQRNGMERLWRSN 281
R+ TE +R ++NGM S PL NF ESFTELSR L R+GME+ WR N
Sbjct: 134 RQVPTEQARAYAEKNGMTFFEVS------PLCNFNVIESFTELSRIVLMRHGMEKFWRPN 187
Query: 282 K 282
+
Sbjct: 188 R 188
>UNIPROTKB|A2VDR1 [details] [associations]
symbol:RAB40C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:DAAA02057278 EMBL:BC133361 IPI:IPI00705044
RefSeq:NP_001075014.1 UniGene:Bt.4759 Ensembl:ENSBTAT00000010364
GeneID:618031 KEGG:bta:618031 InParanoid:A2VDR1 NextBio:20900959
Uniprot:A2VDR1
Length = 281
Score = 703 (252.5 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 137/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 119 (46.9 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 223
Score = 104 (41.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>UNIPROTKB|Q96S21 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001496 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449
PROSITE:PS50225 SMART:SM00175 SMART:SM00253 SMART:SM00969
UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0016567
EMBL:CH471112 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AE006464 HOVERGEN:HBG009351 EMBL:Z98883 HOGENOM:HOG000233967
KO:K07928 OrthoDB:EOG45QHDR EMBL:Z84479 IPI:IPI00045478
RefSeq:NP_001166134.1 RefSeq:NP_001166135.1 RefSeq:NP_001166136.1
RefSeq:NP_066991.3 UniGene:Hs.459630 ProteinModelPortal:Q96S21
SMR:Q96S21 IntAct:Q96S21 MINT:MINT-1419142 STRING:Q96S21
PhosphoSite:Q96S21 DMDM:27734457 PaxDb:Q96S21 PRIDE:Q96S21
Ensembl:ENST00000248139 Ensembl:ENST00000535977
Ensembl:ENST00000538492 Ensembl:ENST00000539661 GeneID:57799
KEGG:hsa:57799 UCSC:uc002chr.3 CTD:57799 GeneCards:GC16P000672
HGNC:HGNC:18285 neXtProt:NX_Q96S21 PharmGKB:PA34139
InParanoid:Q96S21 OMA:ELCCRTI PhylomeDB:Q96S21 GenomeRNAi:57799
NextBio:64743 ArrayExpress:Q96S21 Bgee:Q96S21 CleanEx:HS_RAB40C
Genevestigator:Q96S21 GermOnline:ENSG00000197562 Uniprot:Q96S21
Length = 281
Score = 703 (252.5 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 137/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 119 (46.9 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 223
Score = 104 (41.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>MGI|MGI:2183454 [details] [associations]
symbol:Rab40c "Rab40c, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2183454 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0016567 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:AF422144 EMBL:BC027008 IPI:IPI00128577
RefSeq:NP_631893.1 UniGene:Mm.328872 ProteinModelPortal:Q8VHQ4
SMR:Q8VHQ4 PhosphoSite:Q8VHQ4 PaxDb:Q8VHQ4 PRIDE:Q8VHQ4
Ensembl:ENSMUST00000026826 Ensembl:ENSMUST00000167626
Ensembl:ENSMUST00000179998 GeneID:224624 KEGG:mmu:224624
InParanoid:Q8VHQ4 ChiTaRS:RAB40C NextBio:377259 Bgee:Q8VHQ4
CleanEx:MM_RAB40C Genevestigator:Q8VHQ4
GermOnline:ENSMUSG00000025730 Uniprot:Q8VHQ4
Length = 281
Score = 703 (252.5 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 137/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 119 (46.9 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 223
Score = 104 (41.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>RGD|727914 [details] [associations]
symbol:Rab40c "Rab40c, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001881 "receptor recycling" evidence=NAS]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0042552
"myelination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 RGD:727914 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0042552 GO:GO:0001881 EMBL:CH473948
GO:GO:0019003 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
KO:K07928 CTD:57799 OMA:ELCCRTI EMBL:AC126071 EMBL:AY190240
IPI:IPI00199978 RefSeq:NP_872616.1 UniGene:Rn.2496 SMR:Q6Y2E6
IntAct:Q6Y2E6 Ensembl:ENSRNOT00000027266 GeneID:359728
KEGG:rno:359728 UCSC:RGD:727914 InParanoid:Q6Y2E6 NextBio:672705
Genevestigator:Q6Y2E6 Uniprot:Q6Y2E6
Length = 281
Score = 703 (252.5 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 137/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 119 (46.9 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 223
Score = 104 (41.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>ZFIN|ZDB-GENE-040718-257 [details] [associations]
symbol:rab40b "RAB40B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-040718-257 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233967 KO:K07928
CTD:10966 OrthoDB:EOG45QHDR EMBL:BC076375 IPI:IPI00961642
RefSeq:NP_001002524.2 UniGene:Dr.80970 ProteinModelPortal:Q6DGH0
PRIDE:Q6DGH0 GeneID:436797 KEGG:dre:436797 InParanoid:Q6DGH0
NextBio:20831230 Bgee:Q6DGH0 Uniprot:Q6DGH0
Length = 279
Score = 688 (247.2 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 136/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+LLKFLLVGDSDVGK EIL+ L DGSSESP+ G Y+ + YKT
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILASLQ----------DGSSESPY--G---YNMGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLA+ R VTT + + + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 114 EHAPGVPKILVGNRLHLAYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITESFTELARI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GMERLWR NKV
Sbjct: 174 VLMRHGMERLWRPNKV 189
Score = 115 (45.5 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 21/35 (60%), Positives = 30/35 (85%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCR+IV+ T V+ +++LPLP +KSHLK
Sbjct: 189 VLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLK 223
Score = 102 (41.0 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 22/32 (68%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+GMERLWR NK
Sbjct: 157 PLCNFNITESFTELARIVLMRHGMERLWRPNK 188
Score = 100 (40.3 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 20/24 (83%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
K YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 KAYDFLLKFLLVGDSDVGKGEILA 32
>UNIPROTKB|F1NPF9 [details] [associations]
symbol:RAB40B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00700000104049
OMA:MGIDYKT EMBL:AADN02029895 IPI:IPI00591841
ProteinModelPortal:F1NPF9 Ensembl:ENSGALT00000002349 Uniprot:F1NPF9
Length = 311
Score = 690 (248.0 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 135/196 (68%), Positives = 159/196 (81%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ G Y + YKT
Sbjct: 42 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPY--G---YHMGIDYKT 86
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+R+KLQLWDTSGQGRFCTI RSYSRGAQG++LVYDITN+WSFDGIDRW+KE++
Sbjct: 87 TTILLDGRRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEID 146
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V+T +A+ YA + M FFEVSPLC+FNI ESFTEL+R
Sbjct: 147 EHAPGVPKILVGNRLHLAFKRQVSTEQAQTYAERLGMTFFEVSPLCNFNITESFTELARI 206
Query: 235 ALQRNGMERLWRSNKV 250
L R+GM+RLWR NKV
Sbjct: 207 VLMRHGMDRLWRPNKV 222
Score = 112 (44.5 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V++LQ+LCCRAIV+ T V+ +++LPLP ++SHLK
Sbjct: 222 VLTLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLK 256
Score = 103 (41.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/48 (52%), Positives = 30/48 (62%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAGLV 298
PL NF ESFTEL+R L R+GM+RLWR NK +LT C +V
Sbjct: 190 PLCNFNITESFTELARIVLMRHGMDRLWRPNK---VLTLQDLCCRAIV 234
Score = 97 (39.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 42 RAYDFLLKFLLVGDSDVGKGEILA 65
>UNIPROTKB|Q12829 [details] [associations]
symbol:RAB40B "Ras-related protein Rab-40B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0016567
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
KO:K07928 EMBL:U05227 EMBL:BC018039 IPI:IPI00009953 PIR:G01251
RefSeq:NP_006813.1 UniGene:Hs.484068 ProteinModelPortal:Q12829
SMR:Q12829 IntAct:Q12829 STRING:Q12829 PhosphoSite:Q12829
DMDM:27734453 PRIDE:Q12829 Ensembl:ENST00000571995 GeneID:10966
KEGG:hsa:10966 UCSC:uc002kft.3 CTD:10966 GeneCards:GC17M080614
HGNC:HGNC:18284 neXtProt:NX_Q12829 PharmGKB:PA34138
InParanoid:Q12829 OrthoDB:EOG45QHDR PhylomeDB:Q12829
GenomeRNAi:10966 NextBio:41674 ArrayExpress:Q12829 Bgee:Q12829
CleanEx:HS_RAB40B Genevestigator:Q12829 GermOnline:ENSG00000141542
Uniprot:Q12829
Length = 278
Score = 675 (242.7 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 132/196 (67%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GM+RLWR +KV
Sbjct: 174 VLLRHGMDRLWRPSKV 189
Score = 114 (45.2 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLK
Sbjct: 189 VLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLK 223
Score = 97 (39.2 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
Score = 92 (37.4 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+GM+RLWR +K
Sbjct: 157 PLCNFNITESFTELARIVLLRHGMDRLWRPSK 188
>UNIPROTKB|H3BNV8 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285 EMBL:Z98881
Ensembl:ENST00000566290 Bgee:H3BNV8 Uniprot:H3BNV8
Length = 213
Score = 703 (252.5 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 137/196 (69%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GME++WR N+V
Sbjct: 174 VLMRHGMEKIWRPNRV 189
Score = 104 (41.7 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
Score = 82 (33.9 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 316 VISLQELCCRAIVARTTVYAINQLP 340
V SLQ+LCCRAIV+ T V+ I++LP
Sbjct: 189 VFSLQDLCCRAIVSCTPVHLIDKLP 213
>UNIPROTKB|A6QQY0 [details] [associations]
symbol:RAB40B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 CTD:10966 OrthoDB:EOG45QHDR
OMA:MGIDYKT EMBL:DAAA02049365 EMBL:BC150037 IPI:IPI00867341
RefSeq:NP_001095636.1 UniGene:Bt.25492 Ensembl:ENSBTAT00000020449
GeneID:534237 KEGG:bta:534237 InParanoid:A6QQY0 NextBio:20876320
Uniprot:A6QQY0
Length = 278
Score = 667 (239.9 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 131/196 (66%), Positives = 155/196 (79%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE+
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIN 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESF EL+R
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFMELARI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GM+RLWR +KV
Sbjct: 174 VLLRHGMDRLWRPSKV 189
Score = 112 (44.5 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRA+V+ T + +++LPLP ++SHLK
Sbjct: 189 VLSLQDLCCRAVVSCTPAHLLDRLPLPTALRSHLK 223
Score = 97 (39.2 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
Score = 86 (35.3 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESF EL+R L R+GM+RLWR +K
Sbjct: 157 PLCNFNITESFMELARIVLLRHGMDRLWRPSK 188
>RGD|1305663 [details] [associations]
symbol:Rab40b "Rab40b, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001496 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449
PROSITE:PS50225 SMART:SM00175 SMART:SM00253 SMART:SM00969
UniPathway:UPA00143 RGD:1305663 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
EMBL:CH473948 eggNOG:COG1100 HOVERGEN:HBG009351
GeneTree:ENSGT00700000104049 HOGENOM:HOG000233967 KO:K07928
CTD:10966 OrthoDB:EOG45QHDR EMBL:BC168956 IPI:IPI00361780
RefSeq:NP_001100546.1 UniGene:Rn.8397 Ensembl:ENSRNOT00000054917
GeneID:303754 KEGG:rno:303754 NextBio:652027 Genevestigator:B5DF78
Uniprot:B5DF78
Length = 279
Score = 665 (239.2 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 130/196 (66%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 54
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 55 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGINRWIKEID 114
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 115 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARI 174
Query: 235 ALQRNGMERLWRSNKV 250
L R+GM+RLWR +KV
Sbjct: 175 VLLRHGMDRLWRPSKV 190
Score = 114 (45.2 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRA+V+ T V+ +++LPLP ++SHLK
Sbjct: 190 VLSLQDLCCRAVVSCTPVHLVDKLPLPVALRSHLK 224
Score = 97 (39.2 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 10 RAYDFLLKFLLVGDSDVGKGEILA 33
Score = 92 (37.4 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+GM+RLWR +K
Sbjct: 158 PLCNFNITESFTELARIVLLRHGMDRLWRPSK 189
>MGI|MGI:2183451 [details] [associations]
symbol:Rab40b "Rab40b, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR001496 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449
PROSITE:PS50225 SMART:SM00175 SMART:SM00253 SMART:SM00969
UniPathway:UPA00143 MGI:MGI:2183451 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233967 KO:K07928 CTD:10966
OrthoDB:EOG45QHDR EMBL:AF425643 IPI:IPI00876277 RefSeq:NP_631886.2
UniGene:Mm.281639 ProteinModelPortal:Q8VHP8 SMR:Q8VHP8
IntAct:Q8VHP8 STRING:Q8VHP8 PhosphoSite:Q8VHP8 PRIDE:Q8VHP8
GeneID:217371 KEGG:mmu:217371 InParanoid:Q8VHP8 OMA:MGIDYKT
NextBio:375831 Bgee:Q8VHP8 CleanEx:MM_RAB40B Genevestigator:Q8VHP8
GermOnline:ENSMUSG00000025170 Uniprot:Q8VHP8
Length = 278
Score = 664 (238.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 130/196 (66%), Positives = 157/196 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + +KT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDHKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGI+RW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 114 EHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARI 173
Query: 235 ALQRNGMERLWRSNKV 250
L R+GM+RLWR +KV
Sbjct: 174 VLLRHGMDRLWRPSKV 189
Score = 110 (43.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQELCCRA+V+ T + +++LPLP ++SHLK
Sbjct: 189 VLSLQELCCRAVVSCTPGHLVDKLPLPVALRSHLK 223
Score = 97 (39.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILA 32
Score = 93 (37.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNKGKHLLTYFQYCFAGLV 298
PL NF ESFTEL+R L R+GM+RLWR +K +L+ + C +V
Sbjct: 157 PLCNFNITESFTELARIVLLRHGMDRLWRPSK---VLSLQELCCRAVV 201
>UNIPROTKB|F1S008 [details] [associations]
symbol:LOC100522636 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104049 OMA:MGIDYKT EMBL:FP085448
Ensembl:ENSSSCT00000018647 Uniprot:F1S008
Length = 302
Score = 650 (233.9 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 128/196 (65%), Positives = 153/196 (78%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + Y+T
Sbjct: 42 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYET 86
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDG+ RW+ EV
Sbjct: 87 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGLGRWITEVN 146
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+HAPGVPK+LVGNRLHLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R
Sbjct: 147 QHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELART 206
Query: 235 ALQRNGMERLWRSNKV 250
L R GM+RLWR +KV
Sbjct: 207 VLLRPGMDRLWRPSKV 222
Score = 110 (43.8 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRA+V+ T V+ +++LPLP ++ HLK
Sbjct: 222 VLSLQDLCCRAVVSCTPVHLVDRLPLPVALRGHLK 256
Score = 97 (39.2 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEILS 34
+ YD+LLKFLLVGDSDVGK EIL+
Sbjct: 42 RAYDFLLKFLLVGDSDVGKGEILA 65
Score = 91 (37.1 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R GM+RLWR +K
Sbjct: 190 PLCNFNITESFTELARTVLLRPGMDRLWRPSK 221
>UNIPROTKB|Q8WXH6 [details] [associations]
symbol:RAB40A "Ras-related protein Rab-40A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0016567
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AF132748 EMBL:AF422143 EMBL:AB232637 EMBL:Z69733 EMBL:BC074854
EMBL:BC074855 EMBL:BC113501 EMBL:BC117232 IPI:IPI00514509
RefSeq:NP_543155.2 UniGene:Hs.706904 ProteinModelPortal:Q8WXH6
SMR:Q8WXH6 IntAct:Q8WXH6 PhosphoSite:Q8WXH6 DMDM:83287759
PRIDE:Q8WXH6 DNASU:142684 Ensembl:ENST00000304236
Ensembl:ENST00000372633 GeneID:142684 KEGG:hsa:142684
UCSC:uc004ekk.3 CTD:142684 GeneCards:GC0XM102754 HGNC:HGNC:18283
neXtProt:NX_Q8WXH6 PharmGKB:PA34137 HOGENOM:HOG000233967
InParanoid:Q8WXH6 KO:K07928 OMA:LLRHRMN OrthoDB:EOG40VVQ7
PhylomeDB:Q8WXH6 GenomeRNAi:142684 NextBio:84609 Bgee:Q8WXH6
CleanEx:HS_RAB40A Genevestigator:Q8WXH6 GermOnline:ENSG00000172476
Uniprot:Q8WXH6
Length = 277
Score = 619 (223.0 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 126/194 (64%), Positives = 149/194 (76%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+LLKFLLVGD DVGK EIL L DG++ESP+ S G D YKTTT
Sbjct: 11 YDFLLKFLLVGDRDVGKSEILESLQ----------DGAAESPY-SHLGGID----YKTTT 55
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
ILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEH
Sbjct: 56 ILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEH 115
Query: 177 APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
APGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L
Sbjct: 116 APGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVL 175
Query: 237 QRNGMERLWRSNKV 250
R+ M L R +KV
Sbjct: 176 LRHRMNWLGRPSKV 189
Score = 115 (45.5 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCR IV+ T V+ +++LPLP+ ++SHLK
Sbjct: 189 VLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLK 223
Score = 92 (37.4 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 18/21 (85%), Positives = 19/21 (90%)
Query: 13 YDYLLKFLLVGDSDVGKQEIL 33
YD+LLKFLLVGD DVGK EIL
Sbjct: 11 YDFLLKFLLVGDRDVGKSEIL 31
Score = 61 (26.5 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+ M L R +K
Sbjct: 157 PLCNFNIIESFTELARIVLLRHRMNWLGRPSK 188
>UNIPROTKB|P0C0E4 [details] [associations]
symbol:RAB40AL "Ras-related protein Rab-40A-like"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 PROSITE:PS51419
GO:GO:0044444 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR EMBL:Z95624
EMBL:BC101169 EMBL:BC101170 EMBL:BC101171 EMBL:BC101172
IPI:IPI00555763 RefSeq:NP_001027004.1 UniGene:Hs.449517
ProteinModelPortal:P0C0E4 SMR:P0C0E4 PhosphoSite:P0C0E4
DMDM:83287760 PRIDE:P0C0E4 Ensembl:ENST00000218249 GeneID:282808
KEGG:hsa:282808 UCSC:uc004ejs.3 CTD:282808 GeneCards:GC0XP102192
HGNC:HGNC:25410 MIM:300405 MIM:300519 neXtProt:NX_P0C0E4
Orphanet:85321 PharmGKB:PA142671103 InParanoid:P0C0E4 OMA:LRHRLNW
PhylomeDB:P0C0E4 GenomeRNAi:282808 NextBio:93520 Bgee:P0C0E4
CleanEx:HS_RAB40AL Genevestigator:P0C0E4 GermOnline:ENSG00000102128
Uniprot:P0C0E4
Length = 278
Score = 616 (221.9 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 125/194 (64%), Positives = 149/194 (76%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+LLKFLLVGD DVGK EIL L DG++ESP+ S G D YKTTT
Sbjct: 11 YDFLLKFLLVGDRDVGKSEILESLQ----------DGTAESPY-SHLGGID----YKTTT 55
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
ILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+G+DRW+K++EEH
Sbjct: 56 ILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEH 115
Query: 177 APGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
APGVPK+LVGNRLHLAF R V +A+ YA + + FFEVSPLC+FNI ESFTEL+R L
Sbjct: 116 APGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVL 175
Query: 237 QRNGMERLWRSNKV 250
R+ + L R +KV
Sbjct: 176 LRHRLNWLGRPSKV 189
Score = 111 (44.1 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCR IV+ T V+ +++LPLP ++SHLK
Sbjct: 189 VLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLK 223
Score = 92 (37.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 18/21 (85%), Positives = 19/21 (90%)
Query: 13 YDYLLKFLLVGDSDVGKQEIL 33
YD+LLKFLLVGD DVGK EIL
Sbjct: 11 YDFLLKFLLVGDRDVGKSEIL 31
Score = 58 (25.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+ + L R +K
Sbjct: 157 PLCNFNIIESFTELARIVLLRHRLNWLGRPSK 188
>UNIPROTKB|H3BTC6 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285
EMBL:Z98881 Ensembl:ENST00000568586 Bgee:H3BTC6 Uniprot:H3BTC6
Length = 188
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 136/195 (69%), Positives = 156/195 (80%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRI 173
Query: 235 ALQRNGMERLWRSNK 249
L R+GME++WR N+
Sbjct: 174 VLMRHGMEKIWRPNR 188
Score = 104 (41.7 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
Score = 97 (39.2 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L R+GME++WR N+
Sbjct: 157 PLCNFNVIESFTELSRIVLMRHGMEKIWRPNR 188
>UNIPROTKB|H3BPA5 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0005622 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285
EMBL:Z98881 Ensembl:ENST00000563109 Uniprot:H3BPA5
Length = 237
Score = 394 (143.8 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
Identities = 80/115 (69%), Positives = 91/115 (79%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LKFLLVGDSDVGK EIL L DG++ESP+ +G + YKTTTILLD
Sbjct: 2 LKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKTTTILLD 46
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
G+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++E
Sbjct: 47 GRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE 101
Score = 188 (71.2 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 195 RTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNKV 250
R V T +A YA KN M FFEVSPLC+FN+ ESFTELSR L R+GME++WR N+V
Sbjct: 102 RQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRV 157
Score = 119 (46.9 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 157 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 191
Score = 103 (41.3 bits), Expect = 6.4e-16, Sum P(3) = 6.4e-16
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 204 MYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQRNGMERLWRSNKVGRKPLINF---E 259
+Y I N+ +F + + + + R+ TE +R ++N M S PL NF E
Sbjct: 80 VYDITNRWSFDGIDRWIKEIDERQVPTEQARAYAEKNCMTFFEVS------PLCNFNVIE 133
Query: 260 SFTELSRRALQRNGMERLWRSNK 282
SFTELSR L R+GME++WR N+
Sbjct: 134 SFTELSRIVLMRHGMEKIWRPNR 156
Score = 75 (31.5 bits), Expect = 8.8e-31, Sum P(3) = 8.8e-31
Identities = 16/17 (94%), Positives = 16/17 (94%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LKFLLVGDSDVGK EIL
Sbjct: 2 LKFLLVGDSDVGKGEIL 18
>UNIPROTKB|J9NU44 [details] [associations]
symbol:J9NU44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001496 InterPro:IPR001806 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00253 SMART:SM00969
UniPathway:UPA00143 GO:GO:0005525 GO:GO:0007264 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104049
Ensembl:ENSCAFT00000044688 Uniprot:J9NU44
Length = 336
Score = 496 (179.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/121 (73%), Positives = 105/121 (86%)
Query: 130 DTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRL 189
DTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++EHAPGVPK+LVGNRL
Sbjct: 127 DTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVPKILVGNRL 186
Query: 190 HLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWRSNK 249
HLAF R V T +A+ YA + + FFEVSPLC+FNI ESFTEL+R L R+GM+RLWR +K
Sbjct: 187 HLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARTVLLRHGMDRLWRPSK 246
Query: 250 V 250
V
Sbjct: 247 V 247
Score = 111 (44.1 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V+SLQ+LCCRA+V+ T V+ +++LPLP ++ HLK
Sbjct: 247 VLSLQDLCCRAVVSCTPVHLVDKLPLPMALRGHLK 281
Score = 94 (38.1 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTEL+R L R+GM+RLWR +K
Sbjct: 215 PLCNFNITESFTELARTVLLRHGMDRLWRPSK 246
>UNIPROTKB|H3BME4 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285
EMBL:Z98881 Ensembl:ENST00000569575 Bgee:H3BME4 Uniprot:H3BME4
Length = 157
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 116/164 (70%), Positives = 130/164 (79%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEID 113
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP 218
EHAPGVP++LVGNRLHLAF R V T +A YA KN M FFEVSP
Sbjct: 114 EHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSP 157
Score = 104 (41.7 bits), Expect = 0.00087, P = 0.00087
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>UNIPROTKB|F1S151 [details] [associations]
symbol:F1S151 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449
PROSITE:PS50225 SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525
GO:GO:0007264 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104049 EMBL:CU467915
Ensembl:ENSSSCT00000009983 Uniprot:F1S151
Length = 260
Score = 269 (99.8 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 64/105 (60%), Positives = 72/105 (68%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K Y+YLLKFLLVGDSDVGK EIL L DG++ESP Y + + YKT
Sbjct: 9 KSYNYLLKFLLVGDSDVGKGEILESLQ----------DGAAESP-----NTYSNGIDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITN 159
TTIL+DG RVK++L DTSGQ RFCTI SY R AQ ILLVYDITN
Sbjct: 54 TTILMDG-RVKMELSDTSGQSRFCTIFGSYYRNAQWILLVYDITN 97
Score = 171 (65.3 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 187 NRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNGMERLWR 246
+RLHL F V T +A Y KN FF+VSPLC+FN+ ESFTELSR L ++GME +W+
Sbjct: 106 HRLHLVFKHQVLTEQASAYMEKNFTTFFKVSPLCNFNV-ESFTELSRIVLMQHGME-IWK 163
Query: 247 SNKV 250
N+V
Sbjct: 164 LNRV 167
Score = 108 (43.1 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCC A+V+ T V+ I++LPLP IKSHL+
Sbjct: 167 VFSLQDLCCHAMVSWTPVHLIDKLPLPVTIKSHLR 201
Score = 99 (39.9 bits), Expect = 6.1e-26, Sum P(3) = 6.1e-26
Identities = 20/23 (86%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K Y+YLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYNYLLKFLLVGDSDVGKGEIL 31
Score = 80 (33.2 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 254 PLINF--ESFTELSRRALQRNGMERLWRSNK 282
PL NF ESFTELSR L ++GME +W+ N+
Sbjct: 137 PLCNFNVESFTELSRIVLMQHGME-IWKLNR 166
>UNIPROTKB|I3LUW8 [details] [associations]
symbol:I3LUW8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 Pfam:PF00071 Pfam:PF07525 PROSITE:PS50225
SMART:SM00253 SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525
GO:GO:0007264 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104049 Ensembl:ENSSSCT00000031197 OMA:RIVLKTH
Uniprot:I3LUW8
Length = 233
Score = 366 (133.9 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 82/141 (58%), Positives = 91/141 (64%)
Query: 112 YKTTTILLD-GKRVKLQLWDTSGQGRFCTIIRSYSR------GAQGILLVYDITNKWSFD 164
YKTT LL G L DTSGQGRFCTI RSYSR QGILLVYDITN+WSFD
Sbjct: 11 YKTTKSLLSTGATAPLSPPDTSGQGRFCTIFRSYSRPLSAPFSVQGILLVYDITNRWSFD 70
Query: 165 GIDRWLKEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
GIDRW+KE++EHAPGVP V T +A YA KN M FFEVSPLC+FN+
Sbjct: 71 GIDRWIKEIDEHAPGVPX-------------QVPTEQARAYAEKNCMTFFEVSPLCNFNV 117
Query: 225 RESFTELSRRALQRNGMERLW 245
ESFTELSR L+ +G W
Sbjct: 118 IESFTELSRIVLKTHGRGLRW 138
Score = 119 (46.9 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 316 VISLQELCCRAIVARTTVYAINQLPLPNLIKSHLK 350
V SLQ+LCCRAIV+ T V+ I++LPLP IKSHLK
Sbjct: 141 VFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLK 175
Score = 59 (25.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 254 PLINF---ESFTELSRRALQRNGMERLW 278
PL NF ESFTELSR L+ +G W
Sbjct: 111 PLCNFNVIESFTELSRIVLKTHGRGLRW 138
>UNIPROTKB|H0YFJ5 [details] [associations]
symbol:RAB40B "Ras-related protein Rab-40B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 HGNC:HGNC:18284
EMBL:AC024361 ProteinModelPortal:H0YFJ5 SMR:H0YFJ5
Ensembl:ENST00000538809 Bgee:H0YFJ5 Uniprot:H0YFJ5
Length = 139
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 81/121 (66%), Positives = 96/121 (79%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
+ YD+LLKFLLVGDSDVGK EIL+ L DG++ESP+ +G + YKT
Sbjct: 9 RAYDFLLKFLLVGDSDVGKGEILASLQ----------DGAAESPYGHPAG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TTILLDG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFDGIDRW+KE++
Sbjct: 54 TTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEID 113
Query: 175 E 175
E
Sbjct: 114 E 114
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 80/202 (39%), Positives = 121/202 (59%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
PV A K YD+L K LL+GDS VGK ++ + E F + + S G
Sbjct: 36 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NNTYISTIG---- 81
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I
Sbjct: 82 -IDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN 140
Query: 169 WLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
W+K ++E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+
Sbjct: 141 WMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEA 200
Query: 228 FTELSRRALQRNGMERLWRSNK 249
F+ L+R L ++G RL SNK
Sbjct: 201 FSSLARDILLKSGGRRLGNSNK 222
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 77/196 (39%), Positives = 118/196 (60%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G RL SNK
Sbjct: 168 DILLKSGGRRLGNSNK 183
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 78/196 (39%), Positives = 117/196 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++++ FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L + G R S+K
Sbjct: 168 DILLKTGGRRSGNSSK 183
>TAIR|locus:2075251 [details] [associations]
symbol:RABE1c species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006007 "glucose catabolic process" evidence=RCA] [GO:0042732
"D-xylose metabolic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0009873 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AL355775 HOGENOM:HOG000233968 OMA:WKSKCCS
KO:K07901 EMBL:D01025 EMBL:AY035132 EMBL:AY042795 EMBL:BT001952
EMBL:BT002186 IPI:IPI00518866 PIR:JS0640 RefSeq:NP_001078248.1
RefSeq:NP_001118780.1 RefSeq:NP_190192.1 UniGene:At.258
ProteinModelPortal:P28186 SMR:P28186 IntAct:P28186 STRING:P28186
PaxDb:P28186 PRIDE:P28186 EnsemblPlants:AT3G46060.1
EnsemblPlants:AT3G46060.2 EnsemblPlants:AT3G46060.3 GeneID:823749
KEGG:ath:AT3G46060 TAIR:At3g46060 InParanoid:P28186
PhylomeDB:P28186 ProtClustDB:CLSN2684795 Genevestigator:P28186
GermOnline:AT3G46060 Uniprot:P28186
Length = 216
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 83/192 (43%), Positives = 112/192 (58%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK S L L RF DGS + F + G
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGK----SCLLL--RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 169 WLKEVEEHAP-GVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V T + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 227 SFTELSRRALQR 238
F + R QR
Sbjct: 169 VFFSIGRDIKQR 180
>UNIPROTKB|F1NI30 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 IPI:IPI00593138 GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
Ensembl:ENSGALT00000026683 Uniprot:F1NI30
Length = 191
Score = 306 (112.8 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 72/178 (40%), Positives = 104/178 (58%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K LL+GDS VGK +L RF D + + F S G + +K T+ L G
Sbjct: 2 KLLLIGDSQVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFKIKTVELQG 46
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
K++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ ++EHA V
Sbjct: 47 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDV 106
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQR 238
++L+GN+ + R V + E A ++ + FFE S + NI ++F L+ L++
Sbjct: 107 ERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 164
Score = 49 (22.3 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K LL+GDS VGK +L
Sbjct: 2 KLLLIGDSQVGKTCVL 17
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 83/202 (41%), Positives = 114/202 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
Query: 234 ---RALQRNGMERLWRSNKVGR 252
+++N M + GR
Sbjct: 168 DIKSKMEQNEMRAGGSVSNTGR 189
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 83/202 (41%), Positives = 114/202 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L RF D S + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLF------RFS----DDSFNNSFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI+ F E S + NI E+F L+R
Sbjct: 108 EHAASDVERMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
Query: 234 ---RALQRNGMERLWRSNKVGR 252
+++N M + GR
Sbjct: 168 DIKSKMEQNEMRAGGSVSNTGR 189
>TAIR|locus:2084056 [details] [associations]
symbol:RAB8 "RAB GTPase homolog 8" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0015031
EMBL:AL132966 PROSITE:PS51419 eggNOG:COG1100 UniGene:At.10020
HOGENOM:HOG000233968 HSSP:P07560 KO:K07901 OMA:SNVEQHA EMBL:U82434
EMBL:BT004779 EMBL:AK228083 EMBL:AK230120 EMBL:AY086756
IPI:IPI00517955 PIR:T45901 RefSeq:NP_001078278.1 RefSeq:NP_190929.1
RefSeq:NP_850696.1 ProteinModelPortal:O24466 SMR:O24466
IntAct:O24466 STRING:O24466 PaxDb:O24466 PRIDE:O24466
EnsemblPlants:AT3G53610.1 EnsemblPlants:AT3G53610.2
EnsemblPlants:AT3G53610.3 GeneID:824529 KEGG:ath:AT3G53610
TAIR:At3g53610 InParanoid:O24466 PhylomeDB:O24466
ProtClustDB:CLSN2684931 Genevestigator:O24466 Uniprot:O24466
Length = 216
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 82/192 (42%), Positives = 112/192 (58%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK S L L RF DGS + F + G
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGK----SCLLL--RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 169 WLKEVEEHAP-GVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V + + A + M FFE S + N+ E
Sbjct: 109 WIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEE 168
Query: 227 SFTELSRRALQR 238
F +++ QR
Sbjct: 169 VFFSIAKDIKQR 180
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 77/196 (39%), Positives = 117/196 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F S + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NSTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +AE A ++++ FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L + G R ++K
Sbjct: 168 DILLKTGGRRSGTNSK 183
>UNIPROTKB|A4FV54 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0048210 "Golgi vesicle fusion to target
membrane" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031513 "nonmotile primary cilium" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003 GO:GO:0031513
GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 EMBL:BC123755
IPI:IPI00718035 RefSeq:NP_001098951.1 UniGene:Bt.9871
ProteinModelPortal:A4FV54 SMR:A4FV54 STRING:A4FV54 PRIDE:A4FV54
Ensembl:ENSBTAT00000021408 GeneID:100125881 KEGG:bta:100125881
CTD:4218 InParanoid:A4FV54 KO:K07901 OMA:CDANDKR NextBio:20788864
Uniprot:A4FV54
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLAR 167
>UNIPROTKB|P61007 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0042995
GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901
EMBL:X56385 PIR:B36364 RefSeq:NP_001003152.1 UniGene:Cfa.3637
ProteinModelPortal:P61007 SMR:P61007 MINT:MINT-155827 STRING:P61007
PRIDE:P61007 Ensembl:ENSCAFT00000025007 GeneID:403773
KEGG:cfa:403773 InParanoid:P61007 OMA:SNVEQHA NextBio:20817272
Uniprot:P61007
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>UNIPROTKB|P61006 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0051223 "regulation of
protein transport" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137
"Rab GTPase binding" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0019003
"GDP binding" evidence=IDA] [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IDA] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
EMBL:CH471106 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210
PDB:3QBT PDBsum:3QBT HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:4218 KO:K07901 OMA:SNVEQHA EMBL:X56741 EMBL:S53268
EMBL:AF498943 EMBL:BT007184 EMBL:CR536583 EMBL:CR542274
EMBL:BC002977 IPI:IPI00028481 PIR:B49647 RefSeq:NP_005361.2
UniGene:Hs.642874 PDB:3TNF PDBsum:3TNF ProteinModelPortal:P61006
SMR:P61006 DIP:DIP-43703N IntAct:P61006 MINT:MINT-1416277
STRING:P61006 PhosphoSite:P61006 DMDM:46810392 PaxDb:P61006
PeptideAtlas:P61006 PRIDE:P61006 DNASU:4218 Ensembl:ENST00000300935
GeneID:4218 KEGG:hsa:4218 UCSC:uc002ndn.4 GeneCards:GC19P016222
HGNC:HGNC:7007 MIM:165040 neXtProt:NX_P61006 PharmGKB:PA30743
InParanoid:P61006 PhylomeDB:P61006 ChiTaRS:RAB8A GenomeRNAi:4218
NextBio:16637 Bgee:P61006 CleanEx:HS_RAB8A Genevestigator:P61006
GermOnline:ENSG00000167461 Uniprot:P61006
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>UNIPROTKB|F2Z5I8 [details] [associations]
symbol:RAB8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048210
"Golgi vesicle fusion to target membrane" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031513 "nonmotile primary
cilium" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0055037 GO:GO:0005932 GO:GO:0042384
GO:GO:0031513 GO:GO:0006904 GO:GO:0048210
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:SNVEQHA
EMBL:CU856246 RefSeq:NP_001230731.1 UniGene:Ssc.24907
ProteinModelPortal:F2Z5I8 SMR:F2Z5I8 PRIDE:F2Z5I8
Ensembl:ENSSSCT00000015126 GeneID:100511006 KEGG:ssc:100511006
Uniprot:F2Z5I8
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>UNIPROTKB|Q4R5P1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AB169502
ProteinModelPortal:Q4R5P1 SMR:Q4R5P1 PRIDE:Q4R5P1 Uniprot:Q4R5P1
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>MGI|MGI:96960 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031513
"nonmotile primary cilium" evidence=ISO;IDA] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0042384
"cilium assembly" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048210 "Golgi vesicle fusion to target membrane"
evidence=ISO] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:96960
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0015031
GO:GO:0055037 GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932
GO:GO:0042384 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 PDB:2FU5 PDBsum:2FU5
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:4218
KO:K07901 OMA:SNVEQHA EMBL:S53270 EMBL:AK076048 EMBL:AK079306
EMBL:AK080740 EMBL:BC019990 IPI:IPI00331128 RefSeq:NP_075615.2
UniGene:Mm.162811 ProteinModelPortal:P55258 SMR:P55258
IntAct:P55258 STRING:P55258 PhosphoSite:P55258 PaxDb:P55258
PRIDE:P55258 Ensembl:ENSMUST00000003121 GeneID:17274 KEGG:mmu:17274
EvolutionaryTrace:P55258 NextBio:291770 Bgee:P55258
CleanEx:MM_RAB8A Genevestigator:P55258
GermOnline:ENSMUSG00000003037 Uniprot:P55258
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>RGD|621144 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IDA] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA;ISO] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042384
"cilium assembly" evidence=IEA;ISO] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IDA;IMP] [GO:0048210 "Golgi vesicle
fusion to target membrane" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051223
"regulation of protein transport" evidence=IDA;IMP] [GO:0055037
"recycling endosome" evidence=IEA;ISO] Reactome:REACT_97881
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:621144 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0048471
GO:GO:0007264 GO:GO:0014069 GO:GO:0015031 GO:GO:0043025
GO:GO:0016023 GO:GO:0007409 PROSITE:PS51419 GO:GO:0048169
GO:GO:0051223 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031
CTD:4218 KO:K07901 EMBL:BC071176 EMBL:BC105863 EMBL:M83675
IPI:IPI00196789 PIR:A42148 RefSeq:NP_446450.2 UniGene:Rn.16064
ProteinModelPortal:P35280 SMR:P35280 STRING:P35280
PhosphoSite:P35280 PRIDE:P35280 Ensembl:ENSRNOT00000020748
GeneID:117103 KEGG:rno:117103 UCSC:RGD:621144 NextBio:619992
ArrayExpress:P35280 Genevestigator:P35280
GermOnline:ENSRNOG00000014621 Uniprot:P35280
Length = 207
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>ZFIN|ZDB-GENE-070424-36 [details] [associations]
symbol:rab8a "RAB8A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=IGI;IMP] [GO:0032402 "melanosome transport" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070424-36 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0035845
GeneTree:ENSGT00700000104031 EMBL:CU693492 IPI:IPI00844893
ProteinModelPortal:F1QAX4 Ensembl:ENSDART00000086326 Uniprot:F1QAX4
Length = 210
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 79/180 (43%), Positives = 107/180 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A++ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKCDINEKRQVSKDRGEKLALEYGIKFMETSAKANINVENAFLTLAR 167
>ZFIN|ZDB-GENE-070620-16 [details] [associations]
symbol:rab8b "RAB8B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-070620-16 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
GeneTree:ENSGT00700000104031 CTD:51762 KO:K07902 EMBL:CR450827
EMBL:BC142846 IPI:IPI00854251 RefSeq:NP_001092729.1
UniGene:Dr.151937 SMR:A5PLC7 Ensembl:ENSDART00000099327
GeneID:100093706 KEGG:dre:100093706 OMA:RSRGDYD NextBio:20788636
Uniprot:A5PLC7
Length = 209
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/185 (43%), Positives = 108/185 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLAR 167
Query: 234 RALQR 238
+ R
Sbjct: 168 DIMTR 172
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F + + S G + ++
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NNTYISTIG-----IDFRI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G RL +NK
Sbjct: 168 DILLKSGGRRLKNNNK 183
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 79/196 (40%), Positives = 113/196 (57%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQRNGMERLWRSN 248
LQ+ ++ R N
Sbjct: 168 EDILQKTPVKEPDREN 183
>UNIPROTKB|Q5R4A3 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:P55258 CTD:4218 KO:K07901
EMBL:CR861352 RefSeq:NP_001127003.1 UniGene:Pab.18475
ProteinModelPortal:Q5R4A3 SMR:Q5R4A3 PRIDE:Q5R4A3 GeneID:100174026
KEGG:pon:100174026 InParanoid:Q5R4A3 Uniprot:Q5R4A3
Length = 207
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 80/180 (44%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +F L+R
Sbjct: 108 EHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
>UNIPROTKB|E1C080 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:AADN02040439 EMBL:AADN02040440 EMBL:AADN02040441
IPI:IPI00585001 Ensembl:ENSGALT00000005515 Uniprot:E1C080
Length = 178
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 79/180 (43%), Positives = 107/180 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ + E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLAR 167
>TAIR|locus:2168103 [details] [associations]
symbol:AT5G59840 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB015475 eggNOG:COG1100 HOGENOM:HOG000233968 HSSP:P07560
KO:K07901 OMA:KCDINDK ProtClustDB:CLSN2684795 UniGene:At.29202
UniGene:At.29203 EMBL:BT004152 EMBL:BT005628 IPI:IPI00519307
RefSeq:NP_200792.1 ProteinModelPortal:Q9FJF1 SMR:Q9FJF1
STRING:Q9FJF1 PaxDb:Q9FJF1 PRIDE:Q9FJF1 EnsemblPlants:AT5G59840.1
GeneID:836105 KEGG:ath:AT5G59840 TAIR:At5g59840 InParanoid:Q9FJF1
PhylomeDB:Q9FJF1 ArrayExpress:Q9FJF1 Genevestigator:Q9FJF1
Uniprot:Q9FJF1
Length = 216
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 81/192 (42%), Positives = 112/192 (58%)
Query: 49 PVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDD 108
P + YDYL+K LL+GDS VGK S L L RF DGS + F + G
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGK----SCLLL--RFS----DGSFTTSFITTIG---- 49
Query: 109 MLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDR 168
+ +K TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+ I
Sbjct: 50 -IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 169 WLKEVEEHAP-GVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRE 226
W++ +E+HA V K+LVGN+ + R V + + A + + FFE S + N+ E
Sbjct: 109 WIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEE 168
Query: 227 SFTELSRRALQR 238
F +++ QR
Sbjct: 169 VFFSIAKDIKQR 180
>UNIPROTKB|F1N2J9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0005778 GO:GO:0045046 GeneTree:ENSGT00700000104031
OMA:TSFFRCL IPI:IPI00693636 UniGene:Bt.38707 EMBL:DAAA02028749
PRIDE:F1N2J9 Ensembl:ENSBTAT00000014802 Uniprot:F1N2J9
Length = 207
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLAR 167
>UNIPROTKB|Q2HJI8 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
HSSP:P55258 EMBL:BC105330 IPI:IPI00693636 RefSeq:NP_001069785.1
UniGene:Bt.38707 ProteinModelPortal:Q2HJI8 SMR:Q2HJI8 PRIDE:Q2HJI8
GeneID:614242 KEGG:bta:614242 CTD:51762 InParanoid:Q2HJI8 KO:K07902
NextBio:20899012 Uniprot:Q2HJI8
Length = 207
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLAR 167
>UNIPROTKB|Q92930 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0030911 "TPR domain
binding" evidence=IEA] [GO:0031346 "positive regulation of cell
projection organization" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0051461 "positive regulation of corticotropin
secretion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0015031 "protein transport" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0034332 "adherens junction
organization" evidence=ISS] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0003924
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 EMBL:AC016207 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 OMA:TSFFRCL CTD:51762 KO:K07902 EMBL:AB038995
EMBL:AK001111 EMBL:AL833365 EMBL:BC020654 EMBL:U66624
IPI:IPI00024282 RefSeq:NP_057614.1 UniGene:Hs.389733
ProteinModelPortal:Q92930 SMR:Q92930 IntAct:Q92930 STRING:Q92930
PhosphoSite:Q92930 DMDM:13638434 PaxDb:Q92930 PeptideAtlas:Q92930
PRIDE:Q92930 DNASU:51762 Ensembl:ENST00000321437 GeneID:51762
KEGG:hsa:51762 UCSC:uc002alz.3 GeneCards:GC15P063481
HGNC:HGNC:30273 MIM:613532 neXtProt:NX_Q92930 PharmGKB:PA134944620
InParanoid:Q92930 PhylomeDB:Q92930 ChiTaRS:RAB8B GenomeRNAi:51762
NextBio:55874 ArrayExpress:Q92930 Bgee:Q92930 CleanEx:HS_RAB8B
Genevestigator:Q92930 GermOnline:ENSG00000166128 Uniprot:Q92930
Length = 207
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 82/198 (41%), Positives = 113/198 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ + ++ SN G
Sbjct: 168 DIMTKLN-RKMNDSNSAG 184
>UNIPROTKB|Q5REC9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0034332
"adherens junction organization" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0034332 PROSITE:PS51419
GO:GO:0019003 HOVERGEN:HBG009351 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:CR857602 RefSeq:NP_001124875.1 UniGene:Pab.18127
ProteinModelPortal:Q5REC9 SMR:Q5REC9 PRIDE:Q5REC9
Ensembl:ENSPPYT00000007720 Ensembl:ENSPPYT00000033546
GeneID:100171739 KEGG:pon:100171739 InParanoid:Q5REC9
Uniprot:Q5REC9
Length = 207
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 82/198 (41%), Positives = 113/198 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
Query: 234 RALQRNGMERLWRSNKVG 251
+ + ++ SN G
Sbjct: 168 DIMTKLN-RKMNDSNSAG 184
>ZFIN|ZDB-GENE-040718-2 [details] [associations]
symbol:rab15 "RAB15, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:BX255891 EMBL:BC075754 IPI:IPI00489491
RefSeq:NP_001002318.1 UniGene:Dr.84043 Ensembl:ENSDART00000049462
GeneID:436590 KEGG:dre:436590 InParanoid:Q6DI36 NextBio:20831039
Uniprot:Q6DI36
Length = 212
Score = 310 (114.2 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 78/186 (41%), Positives = 104/186 (55%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S G + +K
Sbjct: 3 KQYDVLFRLLLLGDSGVGKTCLLC---------RF-TDNEFHPSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDIT++ SF I +W +V+
Sbjct: 48 KTLEIDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSFQHIMKWASDVD 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP V K+LVGN+ R V T + + A M FFE S + NI ESFT L+
Sbjct: 108 EYAPEKVQKILVGNKSDEQEKRQVATEQGDKLAKAYGMDFFETSAFTNHNITESFTRLAE 167
Query: 234 RALQRN 239
LQ N
Sbjct: 168 LVLQAN 173
Score = 37 (18.1 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 259 ESFTELSRRALQRN 272
ESFT L+ LQ N
Sbjct: 160 ESFTRLAELVLQAN 173
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 75/196 (38%), Positives = 116/196 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R NK
Sbjct: 168 DILLKSGGRRSGNGNK 183
>UNIPROTKB|H0YNE9 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B Ensembl:ENST00000559006 Bgee:H0YNE9
Uniprot:H0YNE9
Length = 188
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLAR 167
>MGI|MGI:2442982 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030911 "TPR domain binding"
evidence=ISO] [GO:0031346 "positive regulation of cell projection
organization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0034332 "adherens junction organization"
evidence=ISO] [GO:0045046 "protein import into peroxisome membrane"
evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051286 "cell tip" evidence=ISO] [GO:0051461 "positive
regulation of corticotropin secretion" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442982
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0051286 GO:GO:0031410
GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346
GO:GO:0045046 HOGENOM:HOG000233968 OMA:TSFFRCL CTD:51762 KO:K07902
ChiTaRS:RAB8B EMBL:AK084650 EMBL:AK155621 EMBL:BC059208
IPI:IPI00411115 RefSeq:NP_775589.1 UniGene:Mm.260376
ProteinModelPortal:P61028 SMR:P61028 IntAct:P61028 STRING:P61028
PhosphoSite:P61028 PaxDb:P61028 PRIDE:P61028
Ensembl:ENSMUST00000041139 GeneID:235442 KEGG:mmu:235442
InParanoid:P61028 NextBio:382678 Bgee:P61028 CleanEx:MM_RAB8B
Genevestigator:P61028 GermOnline:ENSMUSG00000036943 Uniprot:P61028
Length = 207
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
>RGD|628764 [details] [associations]
symbol:Rab8b "RAB8B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0030911 "TPR domain binding"
evidence=IPI] [GO:0031346 "positive regulation of cell projection
organization" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0034332 "adherens junction organization"
evidence=IDA] [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA] [GO:0051461
"positive regulation of corticotropin secretion" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:628764 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0048471
GO:GO:0007264 GO:GO:0051286 GO:GO:0031410 GO:GO:0005778
GO:GO:0034332 PROSITE:PS51419 GO:GO:0051461 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0031346 GO:GO:0045046
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
CTD:51762 KO:K07902 EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1
UniGene:Rn.10995 ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550
STRING:P70550 PhosphoSite:P70550 PRIDE:P70550
Ensembl:ENSRNOT00000024286 GeneID:266688 KEGG:rno:266688
UCSC:RGD:628764 InParanoid:P70550 NextBio:624500
ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
>UNIPROTKB|P70550 [details] [associations]
symbol:Rab8b "Ras-related protein Rab-8B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628764 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0048471 GO:GO:0007264 GO:GO:0051286
GO:GO:0031410 GO:GO:0005778 GO:GO:0034332 PROSITE:PS51419
GO:GO:0051461 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0031346 GO:GO:0045046 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:TSFFRCL CTD:51762 KO:K07902
EMBL:U53475 IPI:IPI00189690 RefSeq:NP_695229.1 UniGene:Rn.10995
ProteinModelPortal:P70550 SMR:P70550 IntAct:P70550 STRING:P70550
PhosphoSite:P70550 PRIDE:P70550 Ensembl:ENSRNOT00000024286
GeneID:266688 KEGG:rno:266688 UCSC:RGD:628764 InParanoid:P70550
NextBio:624500 ArrayExpress:P70550 Genevestigator:P70550
GermOnline:ENSRNOG00000018009 Uniprot:P70550
Length = 207
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
>FB|FBgn0015789 [details] [associations]
symbol:Rab10 "Rab10" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:AE014298 GO:GO:0003924 GO:GO:0046331
eggNOG:COG1100 KO:K07976 HSSP:P07560 CTD:10890 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AY060425 EMBL:AB006189
RefSeq:NP_523419.1 UniGene:Dm.2609 SMR:O15971 STRING:O15971
EnsemblMetazoa:FBtr0077337 GeneID:33025 KEGG:dme:Dmel_CG17060
UCSC:CG17060-RA FlyBase:FBgn0015789 InParanoid:O15971
OrthoDB:EOG4XWDDW GenomeRNAi:33025 NextBio:781571 Uniprot:O15971
Length = 204
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 81/199 (40%), Positives = 112/199 (56%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK IL RF D + S F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCILF------RFS----DDAFTSTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN+ SF+ I +WL+ +
Sbjct: 48 IKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ + R V E A ++ + F E S + NI +F EL+
Sbjct: 108 DEHANEDVEKMILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELA 167
Query: 233 RRALQR-NGMERLWRSNKV 250
L + +G E +V
Sbjct: 168 EAILDKTSGRESAENQERV 186
>UNIPROTKB|Q5F470 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0055037 GO:GO:0007409
PROSITE:PS51419 GO:GO:0005932 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:CDANDKR
EMBL:AJ851430 IPI:IPI00591966 RefSeq:NP_001026675.1
UniGene:Gga.16249 ProteinModelPortal:Q5F470 SMR:Q5F470 PRIDE:Q5F470
Ensembl:ENSGALT00000006368 GeneID:428352 KEGG:gga:428352
InParanoid:Q5F470 NextBio:20829370 Uniprot:Q5F470
Length = 207
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 79/180 (43%), Positives = 105/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK L+ RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKT---CALF------RFSEDAFNAT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SF+ I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 107
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA P V K+++GN+ R V+ + E A + F E S + NI +F L+R
Sbjct: 108 EHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 75/186 (40%), Positives = 112/186 (60%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K+YD+L K LL+GDS VGK ++ + E F S + S G + +K
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NSTYISTIG-----IDFKV 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI ++GK+VKLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ S++ I W+K ++
Sbjct: 48 KTIEVEGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V+ E A ++ + FFE S N+ ESFT L+R
Sbjct: 108 ENASAGVSRMLLGNKCDIEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLAR 167
Query: 234 RALQRN 239
L ++
Sbjct: 168 DILLKS 173
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 75/196 (38%), Positives = 115/196 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ + E F + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIR-FAEDNF---------NNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A+ A ++ + FFE S N+ E+F L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R +K
Sbjct: 168 DILLKSGGRRSGNHSK 183
>UNIPROTKB|B4DEK7 [details] [associations]
symbol:RAB8A "cDNA FLJ53028, highly similar to Ras-related
protein Rab-8A" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC008894 UniGene:Hs.642874 HGNC:HGNC:7007
EMBL:AK293676 IPI:IPI00909683 ProteinModelPortal:B4DEK7
STRING:B4DEK7 PRIDE:B4DEK7 Ensembl:ENST00000586682 UCSC:uc010xpc.2
Bgee:B4DEK7 Uniprot:B4DEK7
Length = 207
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 82/201 (40%), Positives = 112/201 (55%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V K+++GN+ + R V+ E A+ + F E S + N+ +
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENRYQS--- 164
Query: 234 RALQRNGMERLWRSNKVGRKP 254
+NG +++ R G +P
Sbjct: 165 ----KNG-QKIGRQQPPGEQP 180
>TAIR|locus:2142684 [details] [associations]
symbol:RAB8C "RAB GTPase homolog 8C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 EMBL:AL162751
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
HSSP:P07560 KO:K07901 EMBL:AY035124 EMBL:AY056351 EMBL:AY087058
IPI:IPI00531864 IPI:IPI00656868 PIR:T48378 RefSeq:NP_001031827.1
RefSeq:NP_195972.1 UniGene:At.4875 ProteinModelPortal:Q9LZD4
SMR:Q9LZD4 STRING:Q9LZD4 PaxDb:Q9LZD4 PRIDE:Q9LZD4
EnsemblPlants:AT5G03520.1 GeneID:831817 KEGG:ath:AT5G03520
TAIR:At5g03520 InParanoid:Q9LZD4 OMA:DSFNTTF PhylomeDB:Q9LZD4
ProtClustDB:CLSN2685165 Genevestigator:Q9LZD4 Uniprot:Q9LZD4
Length = 216
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 81/196 (41%), Positives = 113/196 (57%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHAP-GVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNL 164
Query: 223 NIRESFTELSRRALQR 238
N+ F +++ QR
Sbjct: 165 NVENVFMSIAKDIKQR 180
>ZFIN|ZDB-GENE-040718-304 [details] [associations]
symbol:rab10 "RAB10, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-304 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890
KO:K07903 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:CABZ01076797 EMBL:CABZ01076798 EMBL:CABZ01076799 EMBL:BC076234
IPI:IPI00486247 RefSeq:NP_001002566.1 UniGene:Dr.33795 SMR:Q6DGV5
STRING:Q6DGV5 Ensembl:ENSDART00000067776 GeneID:436839
KEGG:dre:436839 InParanoid:Q6DGV5 NextBio:20831271 Uniprot:Q6DGV5
Length = 201
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILKK 173
>ASPGD|ASPL0000069804 [details] [associations]
symbol:srgA species:162425 "Emericella nidulans"
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006906
"vesicle fusion" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001304 eggNOG:COG1100 EMBL:AACD01000117 HOGENOM:HOG000233968
KO:K07901 OMA:SNVEQHA OrthoDB:EOG4X3M9K RefSeq:XP_664578.1
ProteinModelPortal:Q5AXK6 SMR:Q5AXK6 EnsemblFungi:CADANIAT00000507
GeneID:2870169 KEGG:ani:AN6974.2 Uniprot:Q5AXK6
Length = 206
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 80/183 (43%), Positives = 107/183 (58%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L+K LL+GDS VGK L RF D + S F + G +
Sbjct: 1 MAGTRNYDFLIKLLLIGDSGVGKSCCLL---------RFSEDSFTPS-FITTIG-----I 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K TI LDGKRVKLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I W
Sbjct: 46 DFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWF 105
Query: 171 KEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
VE+HA GV K+L+GN+ R VTT + + A + + F EVS + NI ++F
Sbjct: 106 SNVEQHASEGVHKILIGNKCDWEEKRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFY 165
Query: 230 ELS 232
L+
Sbjct: 166 NLA 168
>TAIR|locus:2085089 [details] [associations]
symbol:RABE1e "RAB GTPase homolog E1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
"methionine biosynthetic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139
EMBL:AC015985 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 OMA:TSFFRCL
ProtClustDB:CLSN2685165 EMBL:BT024925 EMBL:AK229294 EMBL:AY084345
IPI:IPI00547488 RefSeq:NP_187601.1 UniGene:At.40023
ProteinModelPortal:Q9SF91 SMR:Q9SF91 STRING:Q9SF91 PaxDb:Q9SF91
PRIDE:Q9SF91 EnsemblPlants:AT3G09900.1 GeneID:820148
KEGG:ath:AT3G09900 TAIR:At3g09900 InParanoid:Q9SF91
PhylomeDB:Q9SF91 Genevestigator:Q9SF91 Uniprot:Q9SF91
Length = 218
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 81/196 (41%), Positives = 114/196 (58%)
Query: 45 METKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSG 104
M P A + YDYL+K LL+GDS VGK S L L RF D + + F + G
Sbjct: 1 MAVAPARA-RSDYDYLIKLLLIGDSGVGK----SCLLL--RFS----DDTFTTSFITTIG 49
Query: 105 KYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFD 164
+ +K T+ LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF+
Sbjct: 50 -----IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 104
Query: 165 GIDRWLKEVEEHAP-GVPKVLVGNRLHL-AFNRTVTTREAEMYAIKNQMAFFEVSPLCDF 222
I W+K +E+HA V K+LVGN+ + R V T + + A + + FFE S +
Sbjct: 105 NIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQ 164
Query: 223 NIRESFTELSRRALQR 238
N+ + F +++ QR
Sbjct: 165 NVEQVFLSIAKDIKQR 180
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 77/196 (39%), Positives = 117/196 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD+L K LL+GDS VGK ++ RF D S + + S G + +K
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLII---------RFAED-SFNNTYISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT++ SF+ I W+K ++
Sbjct: 48 RTVDVEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A GV ++L+GN+ + R V +A A ++ + FFE S N+ E+F+ L+R
Sbjct: 108 ENASAGVERLLLGNKCDMEAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLAR 167
Query: 234 RALQRNGMERLWRSNK 249
L ++G R S+K
Sbjct: 168 DILLKSGGRRSGNSHK 183
>UNIPROTKB|J9NUV0 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
Ensembl:ENSCAFT00000048477 Uniprot:J9NUV0
Length = 209
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 82/211 (38%), Positives = 115/211 (54%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQRNGMERLWRSNKVGRKPLINFESFTE 263
L R + G +N E TE
Sbjct: 168 EDIL-RKVRSNFYSQGAQGHNSFLN-EVETE 196
>UNIPROTKB|A6QLS9 [details] [associations]
symbol:RAB10 "RAB10 protein" species:9913 "Bos taurus"
[GO:0072659 "protein localization to plasma membrane" evidence=IEA]
[GO:0072372 "primary cilium" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0032593 "insulin-responsive
compartment" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903
OMA:WKSKCCS GeneTree:ENSGT00700000104031 EMBL:DAAA02031611
EMBL:DAAA02031612 EMBL:DAAA02031613 EMBL:BC148073 IPI:IPI00708125
RefSeq:NP_001094758.1 UniGene:Bt.103028 SMR:A6QLS9
Ensembl:ENSBTAT00000001303 GeneID:783373 KEGG:bta:783373
InParanoid:A6QLS9 NextBio:20926051 Uniprot:A6QLS9
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>UNIPROTKB|F2Z4P9 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 UniGene:Cfa.3815
NextBio:20817448 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
RefSeq:NP_001003277.2 ProteinModelPortal:F2Z4P9 SMR:F2Z4P9
PRIDE:F2Z4P9 Ensembl:ENSCAFT00000006816 GeneID:403958
KEGG:cfa:403958 Uniprot:F2Z4P9
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>UNIPROTKB|P61026 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0005768 "endosome" evidence=IDA] [GO:0032593
"insulin-responsive compartment" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032869
"cellular response to insulin stimulus" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0006893
"Golgi to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
EMBL:CH471053 GO:GO:0030670 GO:GO:0032869 GO:GO:0016197
GO:GO:0055037 GO:GO:0007409 GO:GO:0005802 GO:GO:0072372
GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:10890 KO:K07903 EMBL:AF086917 EMBL:AF297660 EMBL:AF106681
EMBL:AL136650 EMBL:AK023223 EMBL:AF498945 EMBL:CR457303
EMBL:BC000896 IPI:IPI00016513 RefSeq:NP_057215.3 UniGene:Hs.467960
ProteinModelPortal:P61026 SMR:P61026 IntAct:P61026
MINT:MINT-1404404 STRING:P61026 PhosphoSite:P61026 DMDM:46577638
PaxDb:P61026 PeptideAtlas:P61026 PRIDE:P61026 DNASU:10890
Ensembl:ENST00000264710 GeneID:10890 KEGG:hsa:10890 UCSC:uc002rgv.3
GeneCards:GC02P026256 HGNC:HGNC:9759 HPA:HPA045611 MIM:612672
neXtProt:NX_P61026 PharmGKB:PA34100 InParanoid:P61026 OMA:WKSKCCS
PhylomeDB:P61026 ChiTaRS:RAB10 GenomeRNAi:10890 NextBio:41349
ArrayExpress:P61026 Bgee:P61026 CleanEx:HS_RAB10
Genevestigator:P61026 Uniprot:P61026
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>UNIPROTKB|F2Z5F2 [details] [associations]
symbol:RAB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0072372 "primary cilium" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0031489 "myosin
V binding" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:CU571288 RefSeq:NP_001229989.1
UniGene:Ssc.5049 ProteinModelPortal:F2Z5F2 SMR:F2Z5F2 PRIDE:F2Z5F2
Ensembl:ENSSSCT00000009379 GeneID:100526104 KEGG:ssc:100526104
ArrayExpress:F2Z5F2 Uniprot:F2Z5F2
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>UNIPROTKB|Q5R5U1 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0005768
"endosome" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0005802 "trans-Golgi network" evidence=ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0016197 "endosomal transport"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0032593 "insulin-responsive compartment" evidence=ISS]
[GO:0032869 "cellular response to insulin stimulus" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0045200 "establishment of neuroblast polarity"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
[GO:0097051 "establishment of protein localization to endoplasmic
reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HSSP:P55258
CTD:10890 KO:K07903 EMBL:CR859178 EMBL:CR860762
RefSeq:NP_001126682.1 UniGene:Pab.18148 ProteinModelPortal:Q5R5U1
SMR:Q5R5U1 PRIDE:Q5R5U1 GeneID:100173682 KEGG:pon:100173682
InParanoid:Q5R5U1 Uniprot:Q5R5U1
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>MGI|MGI:105066 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005802 "trans-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045200 "establishment of neuroblast polarity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:0071782
"endoplasmic reticulum tubular network" evidence=ISO] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
[GO:0072372 "primary cilium" evidence=ISO;IDA] [GO:0072659 "protein
localization to plasma membrane" evidence=IMP] [GO:0097051
"establishment of protein localization to endoplasmic reticulum
membrane" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105066 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0030670 GO:GO:0032869
GO:GO:0016197 GO:GO:0055037 GO:GO:0007409 GO:GO:0005802
GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593
GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903 OMA:WKSKCCS ChiTaRS:RAB10
EMBL:AF035646 EMBL:AK008725 EMBL:AK028320 EMBL:AK087964
EMBL:BC056374 IPI:IPI00130118 RefSeq:NP_057885.1 UniGene:Mm.378993
ProteinModelPortal:P61027 SMR:P61027 IntAct:P61027 STRING:P61027
PhosphoSite:P61027 PaxDb:P61027 PRIDE:P61027
Ensembl:ENSMUST00000021001 GeneID:19325 KEGG:mmu:19325
InParanoid:P61027 NextBio:296287 Bgee:P61027 CleanEx:MM_RAB10
Genevestigator:P61027 GermOnline:ENSMUSG00000020671 Uniprot:P61027
Length = 200
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 77/191 (40%), Positives = 111/191 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYL K +L+GDS VGK +L RF R + S+S G + +
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLM------RFTRNEFNIESKSTI--G-------VEFA 48
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T I+LD K++K Q+WDT+GQ R+ I +Y RGA G L+VYDIT + SFD + RWLKE+
Sbjct: 49 TRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKEL 108
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
EHA + +LVGN+ L R V+T EA+ +A +N ++F E S + N+ E+F
Sbjct: 109 REHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVL 168
Query: 229 TELSRRALQRN 239
TE+ R R+
Sbjct: 169 TEIFRIVSNRS 179
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 80/192 (41%), Positives = 113/192 (58%)
Query: 50 VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM 109
+ A +YDYL K LL+GDS VGK S L L RF D +ES + S G
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG----- 45
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYDIT++ +F+ + +W
Sbjct: 46 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQW 105
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
L+E++ +A V K+LVGN+ L R V T+ A+ YA + + F E S N+ ++F
Sbjct: 106 LQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
Query: 229 TELSRRALQRNG 240
++ R G
Sbjct: 166 LTMASEIKSRMG 177
>FB|FBgn0262518 [details] [associations]
symbol:Rab8 "Rab8" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104031 OMA:SNVEQHA EMBL:AY069671 EMBL:D84347
EMBL:AB112933 RefSeq:NP_001246837.1 RefSeq:NP_524172.1
UniGene:Dm.2015 SMR:O18338 MINT:MINT-864123 STRING:O18338
EnsemblMetazoa:FBtr0074921 EnsemblMetazoa:FBtr0308833 GeneID:40168
KEGG:dme:Dmel_CG8287 UCSC:CG8287-RA CTD:40168 FlyBase:FBgn0262518
InParanoid:O18338 OrthoDB:EOG4HT788 GenomeRNAi:40168 NextBio:817374
Uniprot:O18338
Length = 207
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 88/220 (40%), Positives = 123/220 (55%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK IL F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCIL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LD K++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDIT + SF+ I W++ +E
Sbjct: 48 RTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+A V K+L+GN+ L R V+ E AI+ + F E S N+ E+F L+
Sbjct: 108 ENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLAS 167
Query: 234 RALQRNGMERLWRSN--KVGR--KPLINFESFTELSRRAL 269
++ +R+ +N K G KP+ + + LSR +L
Sbjct: 168 D-IKAKTEKRMEANNPPKGGHQLKPMDSRTKDSWLSRCSL 206
>UNIPROTKB|Q5ZIT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0097051 "establishment of protein
localization to endoplasmic reticulum membrane" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0032593
"insulin-responsive compartment" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0000145 "exocyst" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0045200
"establishment of neuroblast polarity" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 EMBL:AJ720699
IPI:IPI00593138 RefSeq:NP_001026268.1 UniGene:Gga.2486 HSSP:P55258
ProteinModelPortal:Q5ZIT5 SMR:Q5ZIT5 PRIDE:Q5ZIT5 GeneID:421994
KEGG:gga:421994 CTD:10890 InParanoid:Q5ZIT5 KO:K07903
NextBio:20824687 Uniprot:Q5ZIT5
Length = 200
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/186 (40%), Positives = 108/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDLK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>UNIPROTKB|P24409 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0007409 "axonogenesis"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0030859 "polarized epithelial cell
differentiation" evidence=IMP] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0000145 "exocyst" evidence=IDA] [GO:0072372 "primary cilium"
evidence=IDA] [GO:0061467 "basolateral protein localization"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0030670 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200
GO:GO:0030859 HOGENOM:HOG000233968 EMBL:X56387 PIR:D36364
UniGene:Cfa.3815 ProteinModelPortal:P24409 SMR:P24409 STRING:P24409
PRIDE:P24409 InParanoid:P24409 OrthoDB:EOG4K3KX6 NextBio:20817448
Uniprot:P24409
Length = 200
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S G + +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+
Sbjct: 108 DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLA 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>POMBASE|SPAC9E9.07c [details] [associations]
symbol:ypt2 "GTPase Ypt2" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006887
"exocytosis" evidence=IMP] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC9E9.07c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006893 GO:GO:0006906
GO:GO:0065007 HOGENOM:HOG000233968 KO:K07901 OMA:SNVEQHA
OrthoDB:EOG4X3M9K EMBL:X52469 EMBL:X52864 PIR:S12790
RefSeq:NP_594580.1 ProteinModelPortal:P17609 SMR:P17609
STRING:P17609 PRIDE:P17609 EnsemblFungi:SPAC9E9.07c.1
GeneID:2543280 KEGG:spo:SPAC9E9.07c NextBio:20804300 Uniprot:P17609
Length = 200
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 79/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL+K LL+GDS VGK S L L RF D + S F + G + +K
Sbjct: 4 KSYDYLIKLLLIGDSGVGK----SCLLL-----RFSEDSFTPS-FITTIG-----IDFKI 48
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GILL+YD+T+K SFD + W VE
Sbjct: 49 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVE 108
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+HA V K+L+GN+ R V+ + + A + + F E S + N+ E+F L+R
Sbjct: 109 QHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAR 168
>UNIPROTKB|J9NWR1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03012309
Ensembl:ENSCAFT00000044078 Uniprot:J9NWR1
Length = 228
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 77/171 (45%), Positives = 101/171 (59%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + S F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVL--------F-RFSEDAFN-STFISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGKR+KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
EHA V K+++GN+ + R V+ E A+ + F E S + N+
Sbjct: 108 EHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINV 158
>DICTYBASE|DDB_G0280043 [details] [associations]
symbol:rab8A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0033298 "contractile vacuole
organization" evidence=IGI] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0050708 "regulation of protein secretion"
evidence=IMP] [GO:0031157 "regulation of aggregate size involved in
sorocarp development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0280043 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0030036 GO:GO:0015031
EMBL:AAFI02000035 GO:GO:0000331 PROSITE:PS51419 GO:GO:0016339
GO:GO:0050708 GO:GO:0031157 eggNOG:COG1100 GO:GO:0033298 KO:K07976
EMBL:M34457 PIR:A34716 RefSeq:XP_641380.1 ProteinModelPortal:P20790
SMR:P20790 MINT:MINT-6947856 STRING:P20790 PRIDE:P20790
EnsemblProtists:DDB0214885 GeneID:8622514 KEGG:ddi:DDB_G0280043
OMA:TSFFRCL ProtClustDB:CLSZ2430646 Uniprot:P20790
Length = 208
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 78/193 (40%), Positives = 110/193 (56%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
T P YDYL+K LL+GDS VGK S L L RF D + S F + G
Sbjct: 2 TSPATNKSAAYDYLIKLLLIGDSGVGK----SCLLL-----RFSEDSFTPS-FITTIG-- 49
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+ +K TI L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I
Sbjct: 50 ---IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNI 106
Query: 167 DRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
W++ +E+HA V K+L+GN+ +A + V + + A + + F E S N+
Sbjct: 107 RNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVE 166
Query: 226 ESFTELSRRALQR 238
E+F L++ +R
Sbjct: 167 EAFISLAKDIKKR 179
>SGD|S000001856 [details] [associations]
symbol:YPT1 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0048211
"Golgi vesicle docking" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0000149 "SNARE binding" evidence=IDA;IPI]
[GO:0035494 "SNARE complex disassembly" evidence=IMP] [GO:0005795
"Golgi stack" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0090114 "COPII-coated vesicle budding"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=IEA;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IGI;IMP]
[GO:0048194 "Golgi vesicle budding" evidence=IGI] [GO:0034498
"early endosome to Golgi transport" evidence=IMP] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0016236 "macroautophagy"
evidence=IMP] [GO:0032258 "CVT pathway" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000001856 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0000139 GO:GO:0006461
GO:GO:0005789 GO:GO:0003924 GO:GO:0005795 EMBL:D50617 EMBL:BK006940
GO:GO:0005802 PROSITE:PS51419 GO:GO:0048194 GO:GO:0032456
GO:GO:0016236 eggNOG:COG1100 GO:GO:0006890 GO:GO:0032258
GO:GO:0000407 GO:GO:0034498 PDB:3CUE PDBsum:3CUE GO:GO:0000149
PDB:1UKV PDB:2BCG PDBsum:1UKV PDBsum:2BCG HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 KO:K07874 OMA:MIMASEI GO:GO:0090114
GO:GO:0035494 GO:GO:0048211 EMBL:X00209 OrthoDB:EOG49W5QK
EMBL:AY558467 PIR:S56216 RefSeq:NP_116615.1 PDB:1YZN PDBsum:1YZN
ProteinModelPortal:P01123 SMR:P01123 DIP:DIP-2019N IntAct:P01123
MINT:MINT-389361 STRING:P01123 PaxDb:P01123 PeptideAtlas:P01123
PRIDE:P01123 EnsemblFungi:YFL038C GeneID:850505 KEGG:sce:YFL038C
CYGD:YFL038c EvolutionaryTrace:P01123 NextBio:966209
Genevestigator:P01123 GermOnline:YFL038C Uniprot:P01123
Length = 206
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 77/190 (40%), Positives = 113/190 (59%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+G+S VGK S L L RF D + + + S G + +K
Sbjct: 4 EYDYLFKLLLIGNSGVGK----SCLLL--RFS----DDTYTNDYISTIG-----VDFKIK 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK VKLQ+WDT+GQ RF TI SY RG+ GI++VYD+T++ SF+G+ WL+E++
Sbjct: 49 TVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L R V A+ +A N+M F E S L N+ ++F ++R+
Sbjct: 109 YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQ 168
Query: 235 ALQRNGMERL 244
+ + L
Sbjct: 169 IKESMSQQNL 178
>UNIPROTKB|E9PU16 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
IPI:IPI00382300 PRIDE:E9PU16 Ensembl:ENSRNOT00000021040
ArrayExpress:E9PU16 Uniprot:E9PU16
Length = 300
Score = 261 (96.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 54/130 (41%), Positives = 81/130 (62%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+
Sbjct: 83 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQ 142
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A V K+LVGN+ L + V A+ +A + F E S N+ +SF
Sbjct: 143 EIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMT 202
Query: 231 LSRRALQRNG 240
++ +R G
Sbjct: 203 MAAEIKKRMG 212
Score = 74 (31.1 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 12 QYDYLLKFLLVGDSDVGKQEIL 33
+YDYL K LL+GDS VGK +L
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL 25
Score = 74 (31.1 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 56 QYDYLLKFLLVGDSDVGKQEIL 77
+YDYL K LL+GDS VGK +L
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLL 25
>UNIPROTKB|F5GY21 [details] [associations]
symbol:RAB8B "Ras-related protein Rab-8B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC016207
HGNC:HGNC:30273 ChiTaRS:RAB8B IPI:IPI01013645
ProteinModelPortal:F5GY21 SMR:F5GY21 Ensembl:ENST00000448330
UCSC:uc010uih.2 ArrayExpress:F5GY21 Bgee:F5GY21 Uniprot:F5GY21
Length = 190
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 76/174 (43%), Positives = 102/174 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L F RF D + + F S G + +K
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLL--------F-RFSEDAFNTT-FISTIG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRES 227
EHA V ++++GN+ + R V+ E AI + F E S N+ E+
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEN 161
>RGD|735172 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:735172 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 GO:GO:0007269 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:376267 KO:K07908 OMA:HNITETF
OrthoDB:EOG4HDSVG EMBL:M83679 EMBL:BC094954 IPI:IPI00196795
PIR:F42148 RefSeq:NP_942044.1 UniGene:Rn.24234
ProteinModelPortal:P35289 STRING:P35289 PhosphoSite:P35289
PRIDE:P35289 Ensembl:ENSRNOT00000010043 GeneID:299156
KEGG:rno:299156 UCSC:RGD:735172 InParanoid:P35289 NextBio:644892
Genevestigator:P35289 GermOnline:ENSRNOG00000007364 Uniprot:P35289
Length = 212
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 83/214 (38%), Positives = 118/214 (55%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC---------RF-TDNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME----RLWRSNKVGRKPLINFESFTE 263
LQ + E R SN++ L E TE
Sbjct: 168 LVLQAHRKELDGLRTCASNELALAELEEDEGKTE 201
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 73/177 (41%), Positives = 106/177 (59%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 73/177 (41%), Positives = 106/177 (59%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRD 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA++YA +NQ++F E S L N+ +FT +
Sbjct: 112 HADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNI 168
>CGD|CAL0001430 [details] [associations]
symbol:YPT1 species:5476 "Candida albicans" [GO:0009306
"protein secretion" evidence=IGI;IMP] [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0035690 "cellular response
to drug" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0005795 "Golgi stack" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0048211 "Golgi vesicle docking" evidence=IEA] [GO:0032258 "CVT
pathway" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0035494 "SNARE complex disassembly" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0048194 "Golgi vesicle budding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IEA] [GO:0032456 "endocytic recycling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] [GO:0000149 "SNARE binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 CGD:CAL0001430
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306 GO:GO:0035690
GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390 HOGENOM:HOG000233968
KO:K07874 RefSeq:XP_721279.1 RefSeq:XP_721550.1
ProteinModelPortal:Q5AI00 SMR:Q5AI00 STRING:Q5AI00 GeneID:3636915
GeneID:3637145 KEGG:cal:CaO19.10570 KEGG:cal:CaO19.3052
Uniprot:Q5AI00
Length = 207
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 82/211 (38%), Positives = 120/211 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RF-ADDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR- 233
+A G V K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R
Sbjct: 109 YATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
Query: 234 -RALQRNGMERLWRSNKVGRKPL-INFESFT 262
+A N +N G+ + + ES T
Sbjct: 169 IKAQMTNNANAGNAANAKGKSNVNLRGESLT 199
>DICTYBASE|DDB_G0276399 [details] [associations]
symbol:rab8B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0031157 "regulation of aggregate
size involved in sorocarp development" evidence=IMP] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=IMP] [GO:0005525
"GTP binding" evidence=IEA;ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0276399
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GenomeReviews:CM000151_GR PROSITE:PS51419
GO:GO:0016339 GO:GO:0031157 eggNOG:COG1100 EMBL:AAFI02000015
KO:K07976 ProtClustDB:CLSZ2430646 EMBL:M34456 PIR:B34716
RefSeq:XP_643115.1 ProteinModelPortal:P20791 SMR:P20791
PRIDE:P20791 EnsemblProtists:DDB0185216 GeneID:8620520
KEGG:ddi:DDB_G0276399 OMA:KCDINDK Uniprot:P20791
Length = 203
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 77/193 (39%), Positives = 109/193 (56%)
Query: 47 TKPVVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKY 106
T P YD+L+K LL+GDS VGK S L L RF DGS F + G
Sbjct: 2 TSPATNKPAAYDFLVKLLLIGDSGVGK----SCLLL--RFS----DGSFTPSFIATIG-- 49
Query: 107 DDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGI 166
+ +K TI L+GKR+KLQ+WDT+GQ RF TI +Y RGA GILLVYD+T++ SF I
Sbjct: 50 ---IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSI 106
Query: 167 DRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIR 225
W++ +E+HA V K+L+GN+ + + V + + A + + F E S N+
Sbjct: 107 RNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVE 166
Query: 226 ESFTELSRRALQR 238
E+F L++ +R
Sbjct: 167 EAFIGLAKDIKKR 179
>UNIPROTKB|Q5AI00 [details] [associations]
symbol:YPT1 "Likely RAB family GTP binding protein involved
in secretion" species:237561 "Candida albicans SC5314" [GO:0000390
"spliceosomal complex disassembly" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IGI;IMP] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0001430 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0009306
GO:GO:0035690 GO:GO:0006888 eggNOG:COG1100 GO:GO:0000390
HOGENOM:HOG000233968 KO:K07874 RefSeq:XP_721279.1
RefSeq:XP_721550.1 ProteinModelPortal:Q5AI00 SMR:Q5AI00
STRING:Q5AI00 GeneID:3636915 GeneID:3637145 KEGG:cal:CaO19.10570
KEGG:cal:CaO19.3052 Uniprot:Q5AI00
Length = 207
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 82/211 (38%), Positives = 120/211 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D + + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RF-ADDTYTPDYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR- 233
+A G V K+LVGN+ L+ + V A+ +A + F E S L N+ ++F ++R
Sbjct: 109 YATGGVMKLLVGNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
Query: 234 -RALQRNGMERLWRSNKVGRKPL-INFESFT 262
+A N +N G+ + + ES T
Sbjct: 169 IKAQMTNNANAGNAANAKGKSNVNLRGESLT 199
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>UNIPROTKB|P59190 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL139022 HOGENOM:HOG000233968 CTD:376267 KO:K07908 OMA:HNITETF
EMBL:BC040679 EMBL:BX248046 IPI:IPI00383449 IPI:IPI00394882
RefSeq:NP_941959.1 UniGene:Hs.512492 ProteinModelPortal:P59190
SMR:P59190 IntAct:P59190 STRING:P59190 PhosphoSite:P59190
DMDM:27734452 PaxDb:P59190 PRIDE:P59190 DNASU:376267
Ensembl:ENST00000267512 Ensembl:ENST00000533601 GeneID:376267
KEGG:hsa:376267 UCSC:uc001xhz.2 UCSC:uc021rut.1
GeneCards:GC14M065412 HGNC:HGNC:20150 HPA:HPA041177
neXtProt:NX_P59190 PharmGKB:PA134901572 GenomeRNAi:376267
NextBio:100634 ArrayExpress:P59190 Bgee:P59190 CleanEx:HS_RAB15
Genevestigator:P59190 Uniprot:P59190
Length = 212
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 80/201 (39%), Positives = 116/201 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC---------RF-TDNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQ--RNGME--RLWRSNKV 250
LQ R +E R+ SN++
Sbjct: 168 LVLQAHRKELEGLRMRASNEL 188
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQIADR 184
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 76/193 (39%), Positives = 111/193 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL + +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFRVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ++R
Sbjct: 172 IYRIVSQKQMVDR 184
>UNIPROTKB|Q1RMR4 [details] [associations]
symbol:RAB15 "Ras-related protein Rab-15" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:Q15907 GeneTree:ENSGT00700000104031
EMBL:BC114760 IPI:IPI00701622 RefSeq:NP_001040003.1
UniGene:Bt.12645 ProteinModelPortal:Q1RMR4 PRIDE:Q1RMR4
Ensembl:ENSBTAT00000035769 GeneID:614507 KEGG:bta:614507 CTD:376267
InParanoid:Q1RMR4 KO:K07908 OMA:HNITETF OrthoDB:EOG4HDSVG
NextBio:20899139 Uniprot:Q1RMR4
Length = 212
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/189 (40%), Positives = 109/189 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC---------RF-TDNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>UNIPROTKB|E2RRT3 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 OMA:TSFFRCL EMBL:AAEX03016199
EMBL:AAEX03016200 Ensembl:ENSCAFT00000026890 Uniprot:E2RRT3
Length = 207
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 78/180 (43%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYL K LL+GDS VGK +L + E +F S S F +G + +K
Sbjct: 3 KTYDYLFK-LLMGDSGVGKTCLL---FREXXX-KF-----SISFFLLLAG-----IDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++ +E
Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA V ++++GN+ + R V+ E AI + F E S N+ E+F L+R
Sbjct: 108 EHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 167
>WB|WBGene00004273 [details] [associations]
symbol:rab-10 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0006412
"translation" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IMP] [GO:0001881 "receptor recycling" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005797 "Golgi medial cisterna"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0031045
"dense core granule" evidence=IDA] [GO:0030424 "axon" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0007264 GO:GO:0002119
GO:GO:0032940 GO:GO:0006412 GO:GO:0015031 GO:GO:0030424
GO:GO:0043025 GO:GO:0040018 GO:GO:0055037 GO:GO:0040035
GO:GO:0005769 GO:GO:0001881 GO:GO:0032456 GO:GO:0040002
GO:GO:0043652 GO:GO:0005797 GO:GO:0031045 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104031
EMBL:FO081319 PIR:T28971 RefSeq:NP_491857.1
ProteinModelPortal:Q94148 SMR:Q94148 STRING:Q94148
EnsemblMetazoa:T23H2.5.1 EnsemblMetazoa:T23H2.5.2
EnsemblMetazoa:T23H2.5.3 GeneID:266836 KEGG:cel:CELE_T23H2.5
UCSC:T23H2.5.1 CTD:266836 WormBase:T23H2.5 InParanoid:Q94148
OMA:HETSAKL NextBio:953212 ArrayExpress:Q94148 Uniprot:Q94148
Length = 201
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YD L K LL+GDS VGK IL Y RF D + + F S G + +K
Sbjct: 3 RRPYDMLFKLLLIGDSGVGKTCIL---Y---RFS----DDAFNTTFISTIG-----IDFK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
TI L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SFD I +WL+ +
Sbjct: 48 IKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Query: 174 EEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+EHA V K+++GN+ ++ R V+ E A + ++F E S + ++ +F +L+
Sbjct: 108 DEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLA 167
Query: 233 RRALQR 238
L +
Sbjct: 168 EAILAK 173
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F TE
Sbjct: 112 HADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ ER
Sbjct: 172 IYRIVSQKQIAER 184
>MGI|MGI:1916865 [details] [associations]
symbol:Rab15 "RAB15, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1916865
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4HDSVG EMBL:BC027769
IPI:IPI00170032 UniGene:Mm.172847 ProteinModelPortal:Q8K386
SMR:Q8K386 IntAct:Q8K386 STRING:Q8K386 PhosphoSite:Q8K386
PaxDb:Q8K386 PRIDE:Q8K386 InParanoid:Q8K386 CleanEx:MM_RAB15
Genevestigator:Q8K386 GermOnline:ENSMUSG00000021062 Uniprot:Q8K386
Length = 212
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 76/189 (40%), Positives = 109/189 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
KQYD L + LL+GDS VGK +L RF D S S G + +K
Sbjct: 3 KQYDVLFRLLLIGDSGVGKTCLLC---------RF-TDNEFHSSHISTIG-----VDFKM 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+ +V+
Sbjct: 48 KTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT L+
Sbjct: 108 EYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTE 167
Query: 234 RALQRNGME 242
LQ + E
Sbjct: 168 LVLQAHRKE 176
>POMBASE|SPBC1703.10 [details] [associations]
symbol:ypt1 "GTPase Ypt1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=IGI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0070317 "negative regulation of G0
to G1 transition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPBC1703.10 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 GO:GO:0070317 GO:GO:0005789
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR
PROSITE:PS51419 GO:GO:0006888 GO:GO:0006995 eggNOG:COG1100
HOGENOM:HOG000233968 KO:K07874 OMA:IDSTPVR EMBL:X52099 EMBL:X15082
PIR:S04590 PIR:T50323 RefSeq:NP_596205.1 ProteinModelPortal:P11620
SMR:P11620 STRING:P11620 PRIDE:P11620 EnsemblFungi:SPBC1703.10.1
GeneID:2539784 KEGG:spo:SPBC1703.10 OrthoDB:EOG49W5QK
NextBio:20800933 Uniprot:P11620
Length = 203
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T L+GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV ++LVGN+ + + V A+ +A + F E S N+ ++F +SR+
Sbjct: 109 YAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQ 168
Query: 235 ALQRNGMERLWRSN 248
+R G SN
Sbjct: 169 IKERMGNNTFASSN 182
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 106/180 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF R + FC S K + + T
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLS------RFTR--------NEFCLES-KSTIGVEFAT 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++G+ VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ + RWLKE+
Sbjct: 52 RTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELR 111
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-TELS 232
+HA + +L+GN+ L R V T +A+ YA K ++F E S L N+ ++F T LS
Sbjct: 112 DHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 72/177 (40%), Positives = 103/177 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ E+F +
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
>UNIPROTKB|F1NMT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
IPI:IPI00818237 Ensembl:ENSGALT00000036791 Uniprot:F1NMT5
Length = 200
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 73/180 (40%), Positives = 105/180 (58%)
Query: 60 LLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILL 119
L K LL+GDS VGK +L RF D + + F S G + +K T+ L
Sbjct: 9 LFKLLLIGDSQVGKTCVLF------RFS----DDAFNTTFISTIG-----IDFKIKTVEL 53
Query: 120 DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-P 178
GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ ++EHA
Sbjct: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANE 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQR 238
V ++L+GN+ + R V + E A ++ + FFE S + NI ++F L+ L++
Sbjct: 114 DVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>RGD|620879 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000145 "exocyst" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005768 "endosome" evidence=ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO;ISS] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO;ISS]
[GO:0016197 "endosomal transport" evidence=ISO;ISS] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISO;ISS] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=ISO;ISS] [GO:0072372 "primary
cilium" evidence=ISO;IDA] [GO:0072659 "protein localization to
plasma membrane" evidence=ISO;ISS] [GO:0097051 "establishment of
protein localization to endoplasmic reticulum membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620879 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0030670 GO:GO:0016020
GO:GO:0071236 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
EMBL:M83677 IPI:IPI00196790 PIR:B42148 UniGene:Rn.65864
ProteinModelPortal:P35281 SMR:P35281 IntAct:P35281
PhosphoSite:P35281 PRIDE:P35281 Genevestigator:P35281
Uniprot:P35281
Length = 200
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/186 (39%), Positives = 109/186 (58%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+K YD L K LL+GDS VGK +L RF D + + F S + + D +K
Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLF------RFS----DDAFNTTFIS-TIEID----FK 47
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T+ L GK++KLQ+WDT+GQ RF TI SY RGA GI+LVYDITN SF+ I +WL+ +
Sbjct: 48 IKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
++HA V ++L+ N+ + R V + E A ++++ FFE S + NI ++F L
Sbjct: 108 DQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLP 167
Query: 233 RRALQR 238
L++
Sbjct: 168 EDILRK 173
>ZFIN|ZDB-GENE-090312-110 [details] [associations]
symbol:si:ch73-131e21.5 "si:ch73-131e21.5"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-090312-110
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM OMA:VESYIST
EMBL:CU467849 IPI:IPI00496910 UniGene:Dr.52596
Ensembl:ENSDART00000074083 Uniprot:B8JLC8
Length = 201
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTAAKEFADSLSIPFLETSAKSSTNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 77/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|Q52NJ2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5861 KO:K07874
OrthoDB:EOG48D0WM EMBL:AY996813 RefSeq:NP_001026957.1
UniGene:Ssc.11024 ProteinModelPortal:Q52NJ2 SMR:Q52NJ2
GeneID:595116 KEGG:ssc:595116 Uniprot:Q52NJ2
Length = 205
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>UNIPROTKB|Q5ZLG1 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001654 "eye development"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 EMBL:AJ719773 IPI:IPI00577245
RefSeq:NP_001006355.1 UniGene:Gga.42447 ProteinModelPortal:Q5ZLG1
SMR:Q5ZLG1 IntAct:Q5ZLG1 PRIDE:Q5ZLG1 Ensembl:ENSGALT00000012033
GeneID:420483 KEGG:gga:420483 CTD:22931 InParanoid:Q5ZLG1
NextBio:20823383 Uniprot:Q5ZLG1
Length = 206
Score = 272 (100.8 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 71/190 (37%), Positives = 104/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ K+LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVKMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>ASPGD|ASPL0000016908 [details] [associations]
symbol:srgB species:162425 "Emericella nidulans"
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 HOGENOM:HOG000233968 OMA:NRVGPPS
ProteinModelPortal:C8V3Z5 SMR:C8V3Z5 EnsemblFungi:CADANIAT00004373
Uniprot:C8V3Z5
Length = 201
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 78/186 (41%), Positives = 110/186 (59%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK VKLQ+WDT+GQ RF TI SY RGA GI +VYD+T+ SF+ + +WL+E++
Sbjct: 49 TIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A GV K+LVGN+ + + V A+ +A + F E S N+ ++F ++R+
Sbjct: 109 YATEGVNKLLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQ 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKERMG 174
>FB|FBgn0016700 [details] [associations]
symbol:Rab1 "Rab1" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=TAS] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0050774 "negative
regulation of dendrite morphogenesis" evidence=IMP] [GO:0031982
"vesicle" evidence=ISS] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0050774
GO:GO:0007264 GO:GO:0007015 GO:GO:0008360 GO:GO:0005811
GO:GO:0003924 GO:GO:0007155 GO:GO:0009306 GO:GO:0030334
eggNOG:COG1100 HOGENOM:HOG000208217 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS CTD:19324
EMBL:BT046126 EMBL:D84312 RefSeq:NP_732610.1 UniGene:Dm.2386
SMR:O18332 IntAct:O18332 MINT:MINT-990386 STRING:O18332
EnsemblMetazoa:FBtr0084104 GeneID:42524 KEGG:dme:Dmel_CG3320
UCSC:CG3320-RA FlyBase:FBgn0016700 InParanoid:O18332
OrthoDB:EOG44QRH0 GenomeRNAi:42524 NextBio:829257 Uniprot:O18332
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 78/186 (41%), Positives = 107/186 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T++ SF+ + +WL+E+E
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIER 111
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A YA + + F E S N+ ++F ++
Sbjct: 112 YACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
Query: 235 ALQRNG 240
R G
Sbjct: 172 IKNRVG 177
>FB|FBgn0015790 [details] [associations]
symbol:Rab11 "Rab11" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0048477
"oogenesis" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0007317 "regulation of pole plasm oskar mRNA
localization" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0006897 "endocytosis"
evidence=IDA;IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IMP]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0030140 "trans-Golgi
network transport vesicle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0001745 "compound eye
morphogenesis" evidence=IMP] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0048749 "compound eye development"
evidence=IGI] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0030723 "ovarian fusome organization" evidence=IMP] [GO:0034334
"adherens junction maintenance" evidence=IMP] [GO:0045169 "fusome"
evidence=IDA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0060187 "cell
pole" evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IMP]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0007112 "male
meiosis cytokinesis" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0000916 "actomyosin
contractile ring contraction" evidence=IMP] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0045478 "fusome organization" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046664 "dorsal closure, amnioserosa morphology change"
evidence=IMP] [GO:0007394 "dorsal closure, elongation of leading
edge cells" evidence=IMP] [GO:2000039 "regulation of trichome
morphogenesis" evidence=IGI;IMP] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005635
GO:GO:0048471 GO:GO:0008103 GO:GO:0007264 GO:GO:0005811
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0006897
GO:GO:0043195 GO:GO:0022416 GO:GO:0031532 GO:GO:0007298
GO:GO:0000916 GO:GO:0030140 GO:GO:0016360 GO:GO:0032154
GO:GO:0019730 GO:GO:0007112 GO:GO:0030718 GO:GO:0030723
GO:GO:0007349 GO:GO:0045169 GO:GO:0048137 GO:GO:0050807
GO:GO:0042078 GO:GO:0042052 GO:GO:0007317 GO:GO:0046664
GO:GO:2000039 GO:GO:0007394 GO:GO:0034334 GO:GO:0070732
GO:GO:0048210 GO:GO:0060187 HSSP:P07560
GeneTree:ENSGT00690000101664 KO:K07904 OMA:ERSAHDE EMBL:AY070528
EMBL:AY113404 EMBL:D84315 EMBL:AB035354 RefSeq:NP_477170.1
RefSeq:NP_599137.1 UniGene:Dm.3038 SMR:O18335 IntAct:O18335
MINT:MINT-758893 STRING:O18335 EnsemblMetazoa:FBtr0084010
EnsemblMetazoa:FBtr0084011 GeneID:42501 KEGG:dme:Dmel_CG5771
UCSC:CG5771-RA CTD:42501 FlyBase:FBgn0015790 InParanoid:O18335
OrthoDB:EOG4DNCMD ChiTaRS:Rab11 GenomeRNAi:42501 NextBio:829121
Uniprot:O18335
Length = 214
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 74/192 (38%), Positives = 112/192 (58%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + +YDYL K +L+GDS VGK +LS RF R + S+S G +
Sbjct: 3 AREDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VE 47
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ T +I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWL+
Sbjct: 48 FATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR 107
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-- 228
E+ +HA + +LVGN+ L R+V T EA+++A +N ++F E S L N+ +F
Sbjct: 108 ELRDHADQNIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQN 167
Query: 229 --TELSRRALQR 238
TE+ R Q+
Sbjct: 168 ILTEIYRIVSQK 179
>UNIPROTKB|F1NNL7 [details] [associations]
symbol:RAB1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 CTD:5861 KO:K07874
OMA:NRVGPPS EMBL:AADN02036218 EMBL:AADN02036219 IPI:IPI00684373
RefSeq:NP_001257591.1 UniGene:Gga.34237 UniGene:Gga.37826
Ensembl:ENSGALT00000031973 GeneID:421273 KEGG:gga:421273
NextBio:20824063 ArrayExpress:F1NNL7 Uniprot:F1NNL7
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>UNIPROTKB|A1L528 [details] [associations]
symbol:RAB1A "RAB1A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:DAAA02031452
EMBL:BT029815 IPI:IPI00829520 UniGene:Bt.49381 SMR:A1L528
Ensembl:ENSBTAT00000022227 InParanoid:A1L528 Uniprot:A1L528
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>UNIPROTKB|F1Q0H3 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:AAEX03007591
Ensembl:ENSCAFT00000005128 Uniprot:F1Q0H3
Length = 250
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 52 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 96
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 97 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 156
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 157 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 216
Query: 235 ALQRNG 240
+R G
Sbjct: 217 IKKRMG 222
>UNIPROTKB|P62822 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 EMBL:X56384 RefSeq:NP_001003153.1
UniGene:Cfa.26557 ProteinModelPortal:P62822 SMR:P62822
IntAct:P62822 PRIDE:P62822 Ensembl:ENSCAFT00000049414 GeneID:403774
KEGG:cfa:403774 CTD:5861 InParanoid:P62822 KO:K07874
OrthoDB:EOG48D0WM NextBio:20817273 Uniprot:P62822
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>UNIPROTKB|P62820 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
Reactome:REACT_115566 GO:GO:0007264 EMBL:CH471053
Reactome:REACT_21300 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 PDB:4FME PDBsum:4FME
HOVERGEN:HBG009351 PDB:2WWX PDB:3L0I PDBsum:2WWX PDBsum:3L0I
HOGENOM:HOG000233968 CTD:5861 KO:K07874 OrthoDB:EOG48D0WM
OMA:NRVGPPS EMBL:M28209 EMBL:AL050268 EMBL:BX571747 EMBL:AK055927
EMBL:AF498929 EMBL:CR533479 EMBL:BC000905 IPI:IPI00005719
IPI:IPI00185217 IPI:IPI00334174 PIR:A34323 RefSeq:NP_004152.1
RefSeq:NP_056358.1 UniGene:Hs.310645 PDB:2FOL PDB:3SFV PDB:3TKL
PDB:4FMB PDB:4FMC PDB:4FMD PDBsum:2FOL PDBsum:3SFV PDBsum:3TKL
PDBsum:4FMB PDBsum:4FMC PDBsum:4FMD ProteinModelPortal:P62820
SMR:P62820 DIP:DIP-1063N IntAct:P62820 MINT:MINT-1343792
STRING:P62820 PhosphoSite:P62820 DMDM:51338603 PaxDb:P62820
PRIDE:P62820 DNASU:5861 Ensembl:ENST00000398529
Ensembl:ENST00000409784 Ensembl:ENST00000409892 GeneID:5861
KEGG:hsa:5861 UCSC:uc002sdm.3 UCSC:uc002sdn.3 UCSC:uc002sdo.3
GeneCards:GC02M065297 HGNC:HGNC:9758 HPA:CAB005331 MIM:179508
neXtProt:NX_P62820 PharmGKB:PA34107 ChiTaRS:RAB1A
EvolutionaryTrace:P62820 GenomeRNAi:5861 NextBio:22762
ArrayExpress:P62820 Bgee:P62820 CleanEx:HS_RAB1A
Genevestigator:P62820 GermOnline:ENSG00000138069 Uniprot:P62820
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>UNIPROTKB|F2Z5U4 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 OMA:NRVGPPS
EMBL:CU928819 ProteinModelPortal:F2Z5U4 SMR:F2Z5U4
Ensembl:ENSSSCT00000009153 Uniprot:F2Z5U4
Length = 202
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>MGI|MGI:97842 [details] [associations]
symbol:Rab1 "RAB1, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000139 "Golgi membrane" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:97842
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0006886 GO:GO:0007264 PROSITE:PS51419 GO:GO:0006888
eggNOG:COG1100 HOVERGEN:HBG009351 KO:K07874 OMA:NRVGPPS EMBL:Y00094
EMBL:X15744 EMBL:X15745 EMBL:X15746 EMBL:X15747 EMBL:AF226873
EMBL:AK034408 EMBL:AK159425 EMBL:AK166249 EMBL:AK167150
EMBL:BC002077 IPI:IPI00114560 PIR:S05551 RefSeq:NP_033022.1
UniGene:Mm.271944 ProteinModelPortal:P62821 SMR:P62821
IntAct:P62821 STRING:P62821 PhosphoSite:P62821 PaxDb:P62821
PRIDE:P62821 Ensembl:ENSMUST00000163483 GeneID:19324 KEGG:mmu:19324
CTD:19324 InParanoid:P62821 NextBio:296283 Bgee:P62821
CleanEx:MM_RAB1 Genevestigator:P62821 GermOnline:ENSMUSG00000020149
Uniprot:P62821
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>RGD|619736 [details] [associations]
symbol:Rab1a "RAB1A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032482 "Rab protein signal transduction" evidence=IC]
[GO:0043025 "neuronal cell body" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0043025
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07874 CTD:19324 EMBL:J02998 EMBL:BC066662
IPI:IPI00421897 PIR:A39963 RefSeq:NP_112352.2 UniGene:Rn.106743
ProteinModelPortal:Q6NYB7 SMR:Q6NYB7 IntAct:Q6NYB7 STRING:Q6NYB7
PhosphoSite:Q6NYB7 PRIDE:Q6NYB7 Ensembl:ENSRNOT00000006950
GeneID:81754 KEGG:rno:81754 UCSC:RGD:619736 NextBio:615518
ArrayExpress:Q6NYB7 Genevestigator:Q6NYB7
GermOnline:ENSRNOG00000004992 GO:GO:0032482 Uniprot:Q6NYB7
Length = 205
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 77/186 (41%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 7 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 111
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 112 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 171
Query: 235 ALQRNG 240
+R G
Sbjct: 172 IKKRMG 177
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 70/179 (39%), Positives = 103/179 (57%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L+GDS VGK +LS RF + + S+S G + +
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLS------RFTKNEFNLESKSTI--G-------VEFA 51
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ +DGK VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T + +F+ +DRWLKE+
Sbjct: 52 TRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKEL 111
Query: 174 EEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+ H P + +LVGN+ L V T + + YA + + F E S L N+ ++F E+
Sbjct: 112 KNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEV 170
>ZFIN|ZDB-GENE-040801-185 [details] [associations]
symbol:rab18b "RAB18B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040801-185 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0009790
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OrthoDB:EOG4VT5Z6
OMA:FAKRHRT EMBL:BC076054 IPI:IPI00506933 RefSeq:NP_001003449.1
UniGene:Dr.79683 ProteinModelPortal:Q6DHC1 SMR:Q6DHC1 STRING:Q6DHC1
PRIDE:Q6DHC1 Ensembl:ENSDART00000042737 GeneID:445055
KEGG:dre:445055 CTD:445055 InParanoid:Q6DHC1 NextBio:20831818
Bgee:Q6DHC1 Uniprot:Q6DHC1
Length = 205
Score = 271 (100.5 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTIAID 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G R KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F ++ WL E+E +
Sbjct: 54 GNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQR 238
+ K+LVGN++ NR V E +A K+ M F E S ++ +F EL + LQ
Sbjct: 114 DLVKMLVGNKIDKD-NREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQT 172
Query: 239 NGMERLWRSN 248
G LW S+
Sbjct: 173 PG---LWESS 179
Score = 50 (22.7 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>CGD|CAL0003404 [details] [associations]
symbol:YPT31 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
[GO:0031505 "fungal-type cell wall organization" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0034498
"early endosome to Golgi transport" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0006887
"exocytosis" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0003404 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0035690 eggNOG:COG1100 KO:K07976
EMBL:AACQ01000275 EMBL:AACQ01000274 RefSeq:XP_710387.1
RefSeq:XP_710395.1 ProteinModelPortal:Q59KX4 SMR:Q59KX4
STRING:Q59KX4 GeneID:3647999 GeneID:3648007 KEGG:cal:CaO19.10153
KEGG:cal:CaO19.2622 Uniprot:Q59KX4
Length = 222
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/176 (42%), Positives = 102/176 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y+YL K +L+GDS VGK +LS RF R + S S G + + T T
Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTI--G-------VEFATRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++EH
Sbjct: 57 LEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEH 116
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
A + LVGN+ L R V T EA+ +A++N + F E S L N+ SF +L
Sbjct: 117 ADANIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQL 172
>UNIPROTKB|Q59KX4 [details] [associations]
symbol:YPT31 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0003404 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0035690 eggNOG:COG1100 KO:K07976
EMBL:AACQ01000275 EMBL:AACQ01000274 RefSeq:XP_710387.1
RefSeq:XP_710395.1 ProteinModelPortal:Q59KX4 SMR:Q59KX4
STRING:Q59KX4 GeneID:3647999 GeneID:3648007 KEGG:cal:CaO19.10153
KEGG:cal:CaO19.2622 Uniprot:Q59KX4
Length = 222
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 74/176 (42%), Positives = 102/176 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y+YL K +L+GDS VGK +LS RF R + S S G + + T T
Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLS------RFTRDEFNLESRSTI--G-------VEFATRT 56
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGKRVK Q+WDT+GQ R+ I +Y RGA G L+VYDI S++ + RWLKE++EH
Sbjct: 57 LEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEH 116
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
A + LVGN+ L R V T EA+ +A++N + F E S L N+ SF +L
Sbjct: 117 ADANIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQL 172
>ZFIN|ZDB-GENE-040625-133 [details] [associations]
symbol:rab1bb "RAB1B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040625-133 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM EMBL:CR450793
EMBL:BC097013 IPI:IPI00492873 RefSeq:NP_001002129.2
UniGene:Dr.79474 SMR:Q4V984 STRING:Q4V984
Ensembl:ENSDART00000078980 GeneID:415219 KEGG:dre:415219 CTD:415219
InParanoid:Q4V984 OMA:MAMATEI NextBio:20818886 Uniprot:Q4V984
Length = 201
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 75/184 (40%), Positives = 107/184 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK IL RF D +ES F S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILL---------RFADDTYTES-FISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S++ + +WLKE++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEE 168
Query: 235 ALQR 238
+R
Sbjct: 169 IKKR 172
>UNIPROTKB|Q2TA29 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0072659 "protein localization to
plasma membrane" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175
GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:Q15907 EMBL:BC111143
IPI:IPI00695221 RefSeq:NP_001033251.1 UniGene:Bt.44630
ProteinModelPortal:Q2TA29 SMR:Q2TA29 STRING:Q2TA29 PRIDE:Q2TA29
GeneID:534708 KEGG:bta:534708 CTD:8766 InParanoid:Q2TA29 KO:K07904
OrthoDB:EOG4RR6J7 NextBio:20876511 Uniprot:Q2TA29
Length = 216
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA +A KN ++F E S L N+ +F TE
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTE 171
Query: 231 LSRRALQRNGMER 243
+ R Q+ +R
Sbjct: 172 IYRIVSQKQMSDR 184
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 70/179 (39%), Positives = 101/179 (56%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+A + YD+L K L++GDS VGK +L RF D + + + G +
Sbjct: 1 MAGTRDYDHLFKLLIIGDSGVGKSSLLL---------RF-ADNTFSENYITTIG-----V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+K T+ ++G+RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL
Sbjct: 46 DFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWL 105
Query: 171 KEVEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
+E+E + V KVLVGN+ R V +A YA ++FFE S D N+ FT
Sbjct: 106 QEIENNCDSVQKVLVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFT 164
>TAIR|locus:2205603 [details] [associations]
symbol:RA-5 "RAS 5" species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0046686
GO:GO:0007264 GO:GO:0000139 GO:GO:0032588 GO:GO:0015031
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 EMBL:U89959 KO:K07976
HOGENOM:HOG000233968 EMBL:AY052333 EMBL:AY061905 EMBL:D01027
IPI:IPI00547166 PIR:B86153 PIR:PS0279 RefSeq:NP_171715.1
UniGene:At.21490 ProteinModelPortal:P28188 SMR:P28188 STRING:P28188
PaxDb:P28188 PRIDE:P28188 EnsemblPlants:AT1G02130.1 GeneID:837023
KEGG:ath:AT1G02130 TAIR:At1g02130 InParanoid:P28188 OMA:VESYIST
PhylomeDB:P28188 ProtClustDB:CLSN2914624 Genevestigator:P28188
Uniprot:P28188
Length = 203
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 75/184 (40%), Positives = 107/184 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFSDDSYVES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L NR + A+ +A + + F E S N+ ++F +S
Sbjct: 109 YASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSAS 168
Query: 235 ALQR 238
+R
Sbjct: 169 IKER 172
>ZFIN|ZDB-GENE-030616-564 [details] [associations]
symbol:rab1a "RAB1A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-030616-564 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104049
CTD:5861 KO:K07874 OrthoDB:EOG48D0WM OMA:NRVGPPS EMBL:AL772154
EMBL:BC050239 EMBL:BC062857 IPI:IPI00492639 RefSeq:NP_001007162.1
UniGene:Dr.77140 SMR:Q7ZSZ0 STRING:Q7ZSZ0
Ensembl:ENSDART00000043002 GeneID:368883 KEGG:dre:368883
InParanoid:Q7ZSZ0 NextBio:20813242 Uniprot:Q7ZSZ0
Length = 201
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 76/186 (40%), Positives = 109/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>ZFIN|ZDB-GENE-040426-873 [details] [associations]
symbol:rab1ba "zRAB1B, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-873
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM KO:K07875
OMA:IDSTPVR EMBL:CABZ01038439 EMBL:CABZ01038440 EMBL:CU570987
EMBL:BC047816 IPI:IPI00491824 RefSeq:NP_957436.1 UniGene:Dr.78500
SMR:Q7ZUV5 STRING:Q7ZUV5 Ensembl:ENSDART00000055810 GeneID:394117
KEGG:dre:394117 CTD:394117 InParanoid:Q7ZUV5 NextBio:20815071
Uniprot:Q7ZUV5
Length = 201
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 80/206 (38%), Positives = 116/206 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S++ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNGMERLWRSNKVGRKPLINFES 260
+R G + G KP + ES
Sbjct: 169 IKKRMGPG----ATTGGDKPNLKIES 190
>UNIPROTKB|Q0IIG8 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0007420 "brain
development" evidence=ISS] [GO:0001654 "eye development"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122650
IPI:IPI00691826 RefSeq:NP_001068967.1 UniGene:Bt.111463
ProteinModelPortal:Q0IIG8 SMR:Q0IIG8 STRING:Q0IIG8 PRIDE:Q0IIG8
Ensembl:ENSBTAT00000013018 GeneID:511160 KEGG:bta:511160
GeneTree:ENSGT00700000104044 InParanoid:Q0IIG8 KO:K07910
OMA:LETYTTR OrthoDB:EOG4VT5Z6 NextBio:20869801 Uniprot:Q0IIG8
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>UNIPROTKB|Q9NP72 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9606
"Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0006897 "endocytosis" evidence=NAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=NAS] [GO:0001654 "eye
development" evidence=ISS] [GO:0007420 "brain development"
evidence=ISS] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005622 EMBL:CH471072 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:AJ277145 EMBL:AJ277146 EMBL:AJ277147 EMBL:AJ277148
EMBL:AJ277149 EMBL:AF137372 EMBL:AY574034 EMBL:AF087860
EMBL:AF498950 EMBL:AF136974 EMBL:AL136734 EMBL:BT009840
EMBL:CR533455 EMBL:AK001555 EMBL:AK295443 EMBL:AK223153
EMBL:AL138920 EMBL:BC015014 EMBL:BC029350 IPI:IPI00014577
IPI:IPI00844361 IPI:IPI00922800 RefSeq:NP_001243339.1
RefSeq:NP_001243340.1 RefSeq:NP_001243341.1 RefSeq:NP_001243344.1
RefSeq:NP_067075.1 UniGene:Hs.406799 PDB:1X3S PDBsum:1X3S
ProteinModelPortal:Q9NP72 SMR:Q9NP72 IntAct:Q9NP72 STRING:Q9NP72
PhosphoSite:Q9NP72 DMDM:12230528 PaxDb:Q9NP72 PRIDE:Q9NP72
DNASU:22931 Ensembl:ENST00000356940 Ensembl:ENST00000535776
GeneID:22931 KEGG:hsa:22931 UCSC:uc001itv.3 GeneCards:GC10P027793
HGNC:HGNC:14244 HPA:HPA025928 MIM:602207 MIM:614222
neXtProt:NX_Q9NP72 Orphanet:2510 PharmGKB:PA34106 PhylomeDB:Q9NP72
ChiTaRS:RAB18 EvolutionaryTrace:Q9NP72 GenomeRNAi:22931
NextBio:43659 ArrayExpress:Q9NP72 Bgee:Q9NP72 CleanEx:HS_RAB18
Genevestigator:Q9NP72 GermOnline:ENSG00000099246 Uniprot:Q9NP72
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>UNIPROTKB|I3LC07 [details] [associations]
symbol:RAB18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 InterPro:IPR025662 PROSITE:PS00675
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR EMBL:FP476080
RefSeq:XP_003357800.1 ProteinModelPortal:I3LC07 SMR:I3LC07
PRIDE:I3LC07 Ensembl:ENSSSCT00000024844 GeneID:100620478
KEGG:ssc:100620478 Uniprot:I3LC07
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>UNIPROTKB|Q5R5H5 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9601
"Pongo abelii" [GO:0001654 "eye development" evidence=ISS]
[GO:0007420 "brain development" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0007420
GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR CTD:22931
EMBL:CR860884 RefSeq:NP_001127616.1 UniGene:Pab.18063
ProteinModelPortal:Q5R5H5 SMR:Q5R5H5 PRIDE:Q5R5H5
Ensembl:ENSPPYT00000002604 GeneID:100174695 KEGG:pon:100174695
InParanoid:Q5R5H5 Uniprot:Q5R5H5
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>MGI|MGI:102790 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:102790 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0016324 GO:GO:0005622
PROSITE:PS51419 GO:GO:0009925 eggNOG:COG1100 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:X80333 EMBL:L04966 EMBL:AK045514 EMBL:AK140901
EMBL:AK143673 EMBL:AK146177 EMBL:AK146397 EMBL:AK154920
EMBL:BC056351 EMBL:M79308 IPI:IPI00116770 PIR:JN0874
RefSeq:NP_851415.1 UniGene:Mm.132802 ProteinModelPortal:P35293
SMR:P35293 STRING:P35293 PhosphoSite:P35293 PaxDb:P35293
PRIDE:P35293 Ensembl:ENSMUST00000097680 GeneID:19330 KEGG:mmu:19330
InParanoid:P35293 NextBio:296305 Bgee:P35293 CleanEx:MM_RAB18
Genevestigator:P35293 GermOnline:ENSMUSG00000073639 Uniprot:P35293
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>RGD|1308905 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007420 "brain development"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1308905 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0005622
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662
GO:GO:0001654 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 CTD:22931 EMBL:BC089957 IPI:IPI00198316
RefSeq:NP_001012486.1 UniGene:Rn.221766 ProteinModelPortal:Q5EB77
SMR:Q5EB77 IntAct:Q5EB77 STRING:Q5EB77 PRIDE:Q5EB77
Ensembl:ENSRNOT00000025828 GeneID:307039 KEGG:rno:307039
UCSC:RGD:1308905 InParanoid:Q5EB77 NextBio:656875
Genevestigator:Q5EB77 GermOnline:ENSRNOG00000018972 Uniprot:Q5EB77
Length = 206
Score = 267 (99.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 70/190 (36%), Positives = 103/190 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +WDT+GQ RF T+ SY RGAQG++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>UNIPROTKB|F1PVP9 [details] [associations]
symbol:RAB1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:MIMASEI EMBL:AAEX03011629
Ensembl:ENSCAFT00000020406 Uniprot:F1PVP9
Length = 203
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 76/190 (40%), Positives = 109/190 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A +YDYL K LL+GDS VGK S L L RF D +ES + S G +
Sbjct: 2 AMNPEYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VD 46
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+
Sbjct: 47 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQ 106
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
E++ +A V K+LVGN+ L + V A+ +A + F E S N+ ++F
Sbjct: 107 EIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMT 166
Query: 231 LSRRALQRNG 240
++ +R G
Sbjct: 167 MAAEIKKRMG 176
>DICTYBASE|DDB_G0283757 [details] [associations]
symbol:rab1A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0283757 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000057 eggNOG:COG1100 KO:K07874 EMBL:L21009
RefSeq:XP_638915.1 ProteinModelPortal:P34139 SMR:P34139
PRIDE:P34139 EnsemblProtists:DDB0191476 GeneID:8624312
KEGG:ddi:DDB_G0283757 OMA:NRVGPPS ProtClustDB:CLSZ2430337
Uniprot:P34139
Length = 202
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 78/183 (42%), Positives = 106/183 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL K LL+GDS VGK S L L RF D SES F S G + +K T
Sbjct: 5 YHYLFKLLLIGDSGVGK----SCLLL-----RFADDTYSES-FISTIG-----VDFKIRT 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I L+GK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+K +F+ + +WL+E++
Sbjct: 50 IELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRF 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TEL 231
A V K+LVGN+ L + V A+ +A Q+ F E S N+ ++F TE+
Sbjct: 110 ACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
Query: 232 SRR 234
R
Sbjct: 170 KNR 172
>DICTYBASE|DDB_G0277867 [details] [associations]
symbol:rab1B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0015031 EMBL:AAFI02000023
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 EMBL:L21010
RefSeq:XP_642309.1 ProteinModelPortal:P34140 SMR:P34140
PRIDE:P34140 EnsemblProtists:DDB0214820 GeneID:8621515
KEGG:ddi:DDB_G0277867 OMA:MIMASEI Uniprot:P34140
Length = 206
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 74/174 (42%), Positives = 103/174 (59%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T+ SF+ + +W++E++
Sbjct: 49 TINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+A V ++LVGN+ L + V T A YA + F E S N+ ++F
Sbjct: 109 YACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAF 162
>UNIPROTKB|Q4R8X3 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 EMBL:AB168324
HSSP:P62820 ProteinModelPortal:Q4R8X3 SMR:Q4R8X3 PRIDE:Q4R8X3
Uniprot:Q4R8X3
Length = 201
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 74/191 (38%), Positives = 108/191 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S ES G + + T
Sbjct: 9 EYDYLFKVVLIGDSGVGKSNLLS------RFTRN--EFSLESKSTIG-------VEFATR 53
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +D K VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++RWLKE+ +
Sbjct: 54 SIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRD 113
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE-LSR 233
H + + VGN+ L R V+T +A+ +A + F E S L N+ +FTE LS+
Sbjct: 114 HTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQ 173
Query: 234 --RALQRNGME 242
R + R ++
Sbjct: 174 IYRVVSRKALD 184
>UNIPROTKB|Q2HJH2 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
OrthoDB:EOG48D0WM EMBL:BC105393 IPI:IPI00727050
RefSeq:NP_001069701.1 UniGene:Bt.59545 ProteinModelPortal:Q2HJH2
SMR:Q2HJH2 PRIDE:Q2HJH2 GeneID:540685 KEGG:bta:540685 CTD:81876
InParanoid:Q2HJH2 KO:K07875 NextBio:20878772 Uniprot:Q2HJH2
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>UNIPROTKB|Q9H0U4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005794 Reactome:REACT_115566 GO:GO:0007264
Reactome:REACT_21300 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 PDB:3JZA PDBsum:3JZA
HOGENOM:HOG000233968 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI EMBL:AF092437 EMBL:AL136635 EMBL:AK292086 EMBL:AK315333
EMBL:BC071169 IPI:IPI00008964 RefSeq:NP_112243.1 UniGene:Hs.300816
PDB:3NKV PDB:4HLQ PDB:4I1O PDBsum:3NKV PDBsum:4HLQ PDBsum:4I1O
ProteinModelPortal:Q9H0U4 SMR:Q9H0U4 DIP:DIP-42462N IntAct:Q9H0U4
MINT:MINT-1343701 STRING:Q9H0U4 PhosphoSite:Q9H0U4 DMDM:23396834
PaxDb:Q9H0U4 PeptideAtlas:Q9H0U4 PRIDE:Q9H0U4 DNASU:81876
Ensembl:ENST00000311481 GeneID:81876 KEGG:hsa:81876 UCSC:uc001ohf.3
GeneCards:GC11P066036 H-InvDB:HIX0034908 H-InvDB:HIX0128663
HGNC:HGNC:18370 HPA:CAB010225 MIM:612565 neXtProt:NX_Q9H0U4
PharmGKB:PA34108 InParanoid:Q9H0U4 PhylomeDB:Q9H0U4 ChiTaRS:RAB1B
EvolutionaryTrace:Q9H0U4 GenomeRNAi:81876 NextBio:72222
ArrayExpress:Q9H0U4 Bgee:Q9H0U4 CleanEx:HS_RAB1B
Genevestigator:Q9H0U4 GermOnline:ENSG00000174903 Uniprot:Q9H0U4
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>UNIPROTKB|I3L6D2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 EMBL:CU928819
Ensembl:ENSSSCT00000031971 Uniprot:I3L6D2
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 76/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+ DYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 3 EIDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 47
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++
Sbjct: 48 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 107
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 108 YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAE 167
Query: 235 ALQRNG 240
+R G
Sbjct: 168 IKKRMG 173
>UNIPROTKB|Q5RE13 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 CTD:81876
KO:K07875 HSSP:P62820 EMBL:CR857726 RefSeq:NP_001127221.1
UniGene:Pab.14281 ProteinModelPortal:Q5RE13 SMR:Q5RE13 PRIDE:Q5RE13
GeneID:100174276 KEGG:pon:100174276 InParanoid:Q5RE13
Uniprot:Q5RE13
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>MGI|MGI:1923558 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923558
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI ChiTaRS:RAB1B EMBL:AK003609 EMBL:AK156726 EMBL:BC016408
IPI:IPI00133706 RefSeq:NP_083852.1 UniGene:Mm.182563
ProteinModelPortal:Q9D1G1 SMR:Q9D1G1 STRING:Q9D1G1
PhosphoSite:Q9D1G1 PaxDb:Q9D1G1 PRIDE:Q9D1G1
Ensembl:ENSMUST00000025804 GeneID:76308 KEGG:mmu:76308
InParanoid:Q9D1G1 NextBio:344943 Bgee:Q9D1G1 CleanEx:MM_RAB1B
Genevestigator:Q9D1G1 GermOnline:ENSMUSG00000024870 Uniprot:Q9D1G1
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>RGD|1642882 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005794 "Golgi
apparatus" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1642882 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473953 EMBL:CH473966 CTD:81876 KO:K07875
UniGene:Rn.155100 RefSeq:NP_001103449.1 RefSeq:XP_002727643.2
SMR:G3V6H0 Ensembl:ENSRNOT00000004991 Ensembl:ENSRNOT00000027486
GeneID:100126191 GeneID:100363782 KEGG:rno:100126191
KEGG:rno:100363782 NextBio:20789017 Uniprot:G3V6H0
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 75/186 (40%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>TAIR|locus:2124593 [details] [associations]
symbol:RABA1e "RAB GTPase homolog A1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 EMBL:AL161548 eggNOG:COG1100 EMBL:AL021710
KO:K07976 HOGENOM:HOG000233968 EMBL:BT010933 EMBL:BT011645
IPI:IPI00520128 PIR:T04539 RefSeq:NP_193578.1 UniGene:At.27918
HSSP:P35278 ProteinModelPortal:O49513 SMR:O49513 PaxDb:O49513
PRIDE:O49513 EnsemblPlants:AT4G18430.1 GeneID:827574
KEGG:ath:AT4G18430 TAIR:At4g18430 InParanoid:O49513 OMA:AHEDSPG
PhylomeDB:O49513 ProtClustDB:CLSN2915845 Genevestigator:O49513
Uniprot:O49513
Length = 217
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 77/193 (39%), Positives = 106/193 (54%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S ES G + + T +
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLS------RFTRN--EFSIESKSTIG-------VEFATRS 54
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +D K +K QLWDT+GQ R+ I +Y RGA G LLVYDIT +F+ ++RWLKE+ +H
Sbjct: 55 VHVDEKIIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDH 114
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE----- 230
V +LVGN+ L R V T EA ++ + M F E S L N+ ++FT
Sbjct: 115 TDANVVIMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQI 174
Query: 231 ---LSRRALQRNG 240
+SR+AL G
Sbjct: 175 YRVMSRKALDGTG 187
>UNIPROTKB|Q8WUD1 [details] [associations]
symbol:RAB2B "Ras-related protein Rab-2B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0005789 GO:GO:0015031 EMBL:CH471078
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0045921 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:RRDTFTH OrthoDB:EOG41G354 EMBL:AF468652
EMBL:AK315354 EMBL:BC020839 IPI:IPI00102896 RefSeq:NP_116235.2
UniGene:Hs.22399 PDB:2A5J PDBsum:2A5J ProteinModelPortal:Q8WUD1
SMR:Q8WUD1 IntAct:Q8WUD1 STRING:Q8WUD1 PhosphoSite:Q8WUD1
DMDM:28436385 PaxDb:Q8WUD1 PRIDE:Q8WUD1 DNASU:84932
Ensembl:ENST00000397762 GeneID:84932 KEGG:hsa:84932 UCSC:uc010tls.2
CTD:84932 GeneCards:GC14M021927 H-InvDB:HIX0011509 HGNC:HGNC:20246
HPA:HPA050292 MIM:607466 neXtProt:NX_Q8WUD1 PharmGKB:PA134865942
InParanoid:Q8WUD1 KO:K07878 PhylomeDB:Q8WUD1
EvolutionaryTrace:Q8WUD1 GenomeRNAi:84932 NextBio:75368
ArrayExpress:Q8WUD1 Bgee:Q8WUD1 CleanEx:HS_RAB2B
Genevestigator:Q8WUD1 GermOnline:ENSG00000129472 Uniprot:Q8WUD1
Length = 216
Score = 256 (95.2 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 72/225 (32%), Positives = 116/225 (51%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL K++++GD+ VGK S L L+ RF G + +
Sbjct: 3 YAYLFKYIIIGDTGVGK----SCLLLQFTDKRF----QPVHDLTIG-------VEFGARM 47
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGK++KLQ+WDT+GQ F +I RSY RGA G LLVYDIT + +F+ + WL++ +H
Sbjct: 48 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 107
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR-- 233
+ + +L+GN+ L R V E E +A ++ + F E S N+ E+F ++
Sbjct: 108 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
Query: 234 -RALQRNGMERLWRSN--KVGRKPLINFESFTELSRRALQRNGME 275
R +Q+ + +N K+G + I+ T + A QRN +
Sbjct: 168 YRKIQQGLFDVHNEANGIKIGPQQSIS----TSVGPSASQRNSRD 208
Score = 60 (26.2 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 13 YDYLLKFLLVGDSDVGKQEIL 33
Y YL K++++GD+ VGK +L
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLL 23
>RGD|1359415 [details] [associations]
symbol:Rab1b-ps1 "RAB1B, member RAS oncogene family, pseudogene
1" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1359415 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG48D0WM EMBL:X13905 IPI:IPI00480673 PIR:S06147
UniGene:Rn.155100 ProteinModelPortal:P10536 SMR:P10536
IntAct:P10536 PhosphoSite:P10536 PRIDE:P10536 InParanoid:P10536
Genevestigator:P10536 GermOnline:ENSRNOG00000003753
GermOnline:ENSRNOG00000020253 Uniprot:P10536
Length = 201
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 74/186 (39%), Positives = 108/186 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ RF T+ SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>UNIPROTKB|F1M225 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 IPI:IPI00951369
Ensembl:ENSRNOT00000020209 ArrayExpress:F1M225 Uniprot:F1M225
Length = 205
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 76/184 (41%), Positives = 107/184 (58%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK S L L RF D +ES + S G + +K TI
Sbjct: 9 DYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIRTI 53
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ SF+ + +WL+E++ +A
Sbjct: 54 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA 113
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V K+LVGN+ L + V A+ +A + F E S N+ +SF ++
Sbjct: 114 SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIK 173
Query: 237 QRNG 240
+R G
Sbjct: 174 KRMG 177
>UNIPROTKB|F1S8J6 [details] [associations]
symbol:RAB2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045921
GeneTree:ENSGT00690000101805 OMA:RRDTFTH KO:K07878 EMBL:FP340603
EMBL:CU695044 RefSeq:XP_003128612.1 Ensembl:ENSSSCT00000027841
GeneID:100516623 KEGG:ssc:100516623 Uniprot:F1S8J6
Length = 216
Score = 255 (94.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 70/225 (31%), Positives = 116/225 (51%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL K++++GD+ VGK S L L+ RF G + +
Sbjct: 3 YAYLFKYIIIGDTGVGK----SCLLLQFTDKRF----QPVHDLTIG-------VEFGARM 47
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGK++KLQ+WDT+GQ F +I RSY RGA G LLVYDIT + +F+ + WL++ +H
Sbjct: 48 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 107
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR-- 233
+ + +L+GN+ L R V E E +A ++ + F E S N+ E+F ++
Sbjct: 108 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
Query: 234 -RALQRNGMERLWRSN--KVGRKPLINFESFTELSRRALQRNGME 275
R +Q+ + +N K+G + I+ S+R+ + G +
Sbjct: 168 YRKIQQGLFDVHNEANGIKIGPQQCISTSVGPSASQRSTRDMGSD 212
Score = 60 (26.2 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 13 YDYLLKFLLVGDSDVGKQEIL 33
Y YL K++++GD+ VGK +L
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLL 23
>ASPGD|ASPL0000062894 [details] [associations]
symbol:srgE species:162425 "Emericella nidulans"
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0071852
"fungal-type cell wall organization or biogenesis" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 OMA:ERSAHDE ProteinModelPortal:C8VTZ0
EnsemblFungi:CADANIAT00002359 Uniprot:C8VTZ0
Length = 210
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 77/210 (36%), Positives = 116/210 (55%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD+L K +L+GDS GK +LS RF R + S+S G + + T
Sbjct: 5 EYDFLFKVVLIGDSGTGKSNLLS------RFTRNEFNLDSKSTI--G-------VEFATR 49
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +D K +K Q+WDT+GQ R+ I +Y RGA G LLVYDI+ ++D ++RWLKE+ +
Sbjct: 50 SIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRD 109
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----TE 230
HA + +LVGN+ L R V T EA+ +A +N ++F E S L N+ +F TE
Sbjct: 110 HADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTE 169
Query: 231 LSRRALQRNGMERLWRSNKVG-RKPLINFE 259
+ R + +E VG R+ +I+ E
Sbjct: 170 IYR-IVSSKALEGESGGASVGERRQIIDIE 198
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--YKT 114
+D+L K L++GDS VGK +L RF S+ F SG Y + +K
Sbjct: 5 FDHLFKLLIIGDSGVGKSSLLI---------RF-----SDDTF---SGSYITTIGVDFKI 47
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++G RVKLQ+WDT+GQ RF TI +Y RG G+++VYD+TN SF + RWL+E++
Sbjct: 48 RTVDIEGMRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQ 107
Query: 175 EHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+ V KVLVGN+ + V T +A+ +A + + FE S + N+ F ++R+
Sbjct: 108 NNCDVVKKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQ 167
Query: 235 AL 236
L
Sbjct: 168 VL 169
>TAIR|locus:2129161 [details] [associations]
symbol:RAB1C "RAB GTPase homolog 1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IGI] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005773 GO:GO:0007264 GO:GO:0000139
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016192 GO:GO:0009555
GO:GO:0015031 GO:GO:0009860 PROSITE:PS51419 EMBL:Z97343
eggNOG:COG1100 EMBL:AL161546 HOGENOM:HOG000233968 HSSP:P07560
KO:K07874 UniGene:At.24811 ProtClustDB:CLSN2685987 EMBL:AF127134
EMBL:AY052204 EMBL:AY060495 EMBL:AK227290 IPI:IPI00546817
PIR:H71444 RefSeq:NP_193486.1 UniGene:At.22483 UniGene:At.48871
ProteinModelPortal:Q9SEH3 SMR:Q9SEH3 STRING:Q9SEH3 PaxDb:Q9SEH3
PRIDE:Q9SEH3 ProMEX:Q9SEH3 EnsemblPlants:AT4G17530.1 GeneID:827468
KEGG:ath:AT4G17530 TAIR:At4g17530 InParanoid:Q9SEH3 OMA:IDSTPVR
PhylomeDB:Q9SEH3 Genevestigator:Q9SEH3 Uniprot:Q9SEH3
Length = 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 72/178 (40%), Positives = 103/178 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RF-ADDSYLDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++ YD+T+ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L + V+T A+ +A + + F E S N+ E+F ++
Sbjct: 109 YASENVNKLLVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMT 166
>ZFIN|ZDB-GENE-070822-21 [details] [associations]
symbol:zgc:171927 "zgc:171927" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070822-21 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
EMBL:AL928851 IPI:IPI00858827 Ensembl:ENSDART00000004518
OMA:SKINSAP Bgee:F1RBB0 Uniprot:F1RBB0
Length = 210
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 76/200 (38%), Positives = 113/200 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++GK VKLQ+WDT+GQ RF TI SY RGA GI++VYD+T + SF+ + +WL+E++
Sbjct: 49 TIEMEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L+ + V A + ++ E S N+ ++F ++
Sbjct: 109 YACENVSKLLVGNKSDLSSKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLTMASE 168
Query: 235 ALQRNGMERLWRSN-KVGRK 253
+R G + + K+G K
Sbjct: 169 IQKRIGADSVQNETVKIGSK 188
>UNIPROTKB|E2RLX7 [details] [associations]
symbol:RAB2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0045921 GeneTree:ENSGT00690000101805
OMA:RRDTFTH CTD:84932 KO:K07878 EMBL:AAEX03009855
RefSeq:XP_532625.2 ProteinModelPortal:E2RLX7
Ensembl:ENSCAFT00000038495 GeneID:475402 KEGG:cfa:475402
Uniprot:E2RLX7
Length = 216
Score = 253 (94.1 bits), Expect = 5.2e-26, Sum P(2) = 5.2e-26
Identities = 70/223 (31%), Positives = 114/223 (51%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
Y YL K++++GD+ VGK S L L+ RF G + +
Sbjct: 3 YAYLFKYIIIGDTGVGK----SCLLLQFTDKRF----QPVHDLTIG-------VEFGARM 47
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGK++KLQ+WDT+GQ F +I RSY RGA G LLVYDIT + +F+ + WL++ +H
Sbjct: 48 VNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH 107
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR-- 233
+ + +L+GN+ L R V E E +A ++ + F E S N+ E+F ++
Sbjct: 108 SSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
Query: 234 -RALQRNGMERLWRSN--KVGRKPLINFESFTELSRRALQRNG 273
R +Q+ + +N K+G + I+ S+R+ G
Sbjct: 168 YRKIQQGLFDVHNEANGIKIGPQQCISASVGPSASQRSSNEIG 210
Score = 60 (26.2 bits), Expect = 5.2e-26, Sum P(2) = 5.2e-26
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 13 YDYLLKFLLVGDSDVGKQEIL 33
Y YL K++++GD+ VGK +L
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLL 23
>SGD|S000000833 [details] [associations]
symbol:YPT31 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0005794 "Golgi apparatus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISS;IDA;IPI] [GO:0005768
"endosome" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0034498 "early
endosome to Golgi transport" evidence=IGI] [GO:0006887 "exocytosis"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IGI;IMP] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000000833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0000139 GO:GO:0005741 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 EMBL:BK006939 GO:GO:0006887 EMBL:U18778
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0034498 PDB:3CPJ PDBsum:3CPJ
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
OMA:ERSAHDE EMBL:L17070 EMBL:X72833 PIR:S42679 RefSeq:NP_010948.1
ProteinModelPortal:P38555 SMR:P38555 DIP:DIP-2022N IntAct:P38555
MINT:MINT-386034 STRING:P38555 PaxDb:P38555 PeptideAtlas:P38555
PRIDE:P38555 EnsemblFungi:YER031C GeneID:856753 KEGG:sce:YER031C
OrthoDB:EOG41K2ND EvolutionaryTrace:P38555 NextBio:982908
Genevestigator:P38555 GermOnline:YER031C Uniprot:P38555
Length = 223
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 71/183 (38%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD L K +L+GDS VGK +LS RF + + S+S G + + T T
Sbjct: 10 YDLLFKIVLIGDSGVGKSNLLS------RFTKNEFNMDSKSTI--G-------VEFATRT 54
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DGKR+K Q+WDT+GQ R+ I +Y RGA G L+VYDI+ S++ + WL E+ E+
Sbjct: 55 LEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREN 114
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V L+GN+ LA R V T E++ +A +NQ+ F E S L N+ ++F EL
Sbjct: 115 ADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTI 174
Query: 236 LQR 238
Q+
Sbjct: 175 YQK 177
>TAIR|locus:2018698 [details] [associations]
symbol:RABA1i "RAB GTPase homolog A1I" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC010155 EMBL:AC007508
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 ProtClustDB:CLSN2679642
EMBL:DQ056467 IPI:IPI00536131 RefSeq:NP_174177.1 UniGene:At.51281
ProteinModelPortal:Q9S810 SMR:Q9S810 PaxDb:Q9S810 PRIDE:Q9S810
EnsemblPlants:AT1G28550.1 GeneID:839755 KEGG:ath:AT1G28550
TAIR:At1g28550 InParanoid:Q9S810 OMA:HDSRATI PhylomeDB:Q9S810
Genevestigator:Q9S810 Uniprot:Q9S810
Length = 218
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 71/179 (39%), Positives = 100/179 (55%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L GDS VGK +LS RF R D S +S G + +
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLS------RFTRN--DFSHDSRATIG-------VEFA 51
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I D K VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++RWLKE+
Sbjct: 52 TRSIQCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+H + +LVGN+ L R ++T EA+ +A + F E S L N+ +FTE+
Sbjct: 112 RDHTDANIVIMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEV 170
>TAIR|locus:2171484 [details] [associations]
symbol:RAB1A "RAB GTPase homolog 1A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009860 "pollen tube growth" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0016192 GO:GO:0015031 GO:GO:0009860
PROSITE:PS51419 eggNOG:COG1100 EMBL:AB018117 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 OMA:MIMASEI EMBL:AF324990
EMBL:AY080753 EMBL:AY114013 EMBL:BT023739 EMBL:BT025777
EMBL:AK227103 EMBL:AY085384 IPI:IPI00655443 RefSeq:NP_568678.1
UniGene:At.16977 UniGene:At.24811 UniGene:At.25480
ProteinModelPortal:Q9FPJ4 SMR:Q9FPJ4 IntAct:Q9FPJ4 STRING:Q9FPJ4
PaxDb:Q9FPJ4 PRIDE:Q9FPJ4 EnsemblPlants:AT5G47200.1 GeneID:834766
KEGG:ath:AT5G47200 TAIR:At5g47200 InParanoid:Q9FPJ4
PhylomeDB:Q9FPJ4 ProtClustDB:CLSN2685987 Genevestigator:Q9FPJ4
Uniprot:Q9FPJ4
Length = 202
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 72/178 (40%), Positives = 103/178 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RF-ADDSYLDSYISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ DGK +KLQ+WDT+GQ RF TI SY RGA GI++ YD+T+ SF+ + +WL E++
Sbjct: 49 TVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
+A V K+LVGN+ L + V+T A+ +A + + F E S N+ E+F ++
Sbjct: 109 YASENVNKLLVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMT 166
>SGD|S000003178 [details] [associations]
symbol:YPT32 "Rab family GTPase involved in the exocytic
pathway" species:4932 "Saccharomyces cerevisiae" [GO:0015031
"protein transport" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA;IMP] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=ISS;IDA;IPI] [GO:0016192 "vesicle-mediated
transport" evidence=IGI;IMP] [GO:0005741 "mitochondrial outer
membrane" evidence=IDA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0034498 "early endosome to Golgi transport" evidence=IGI]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000003178
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 EMBL:BK006941 GO:GO:0005741 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0006887 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0034498 EMBL:U33754 EMBL:Z72732 KO:K07976
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
OrthoDB:EOG41K2ND EMBL:X72834 EMBL:AY558506 PIR:S58514
RefSeq:NP_011305.1 PDB:3RWM PDB:3RWO PDBsum:3RWM PDBsum:3RWO
ProteinModelPortal:P51996 SMR:P51996 DIP:DIP-6597N IntAct:P51996
MINT:MINT-703976 STRING:P51996 PaxDb:P51996 PeptideAtlas:P51996
PRIDE:P51996 EnsemblFungi:YGL210W GeneID:852662 KEGG:sce:YGL210W
NextBio:971948 Genevestigator:P51996 GermOnline:YGL210W
Uniprot:P51996
Length = 222
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSS-ESPFCSGSGKYDDMLAYKTT 115
YDYL K +L+GDS VGK +LS RF D + ES G + + T
Sbjct: 10 YDYLFKIVLIGDSGVGKSNLLS---------RFTTDEFNIESKSTIG-------VEFATR 53
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI ++ K++K Q+WDT+GQ R+ I +Y RGA G L+VYDI+ S++ + WL E+ E
Sbjct: 54 TIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRE 113
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+A V L+GN+ LA R V T EA+ +A++NQM F E S L N+ ++F EL
Sbjct: 114 NADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFREL 170
>ZFIN|ZDB-GENE-030131-3980 [details] [associations]
symbol:rab18a "RAB18A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001654 "eye
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030131-3980 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0009790 eggNOG:COG1100
InterPro:IPR025662 PROSITE:PS00675 GO:GO:0001654 HOVERGEN:HBG009351
HSSP:P01112 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044
KO:K07910 OrthoDB:EOG4VT5Z6 EMBL:BX465854 EMBL:BC065318
EMBL:BC153660 IPI:IPI00502757 RefSeq:NP_996661.1 UniGene:Dr.5298
SMR:Q6P129 STRING:Q6P129 Ensembl:ENSDART00000077631 GeneID:325255
KEGG:dre:325255 CTD:325255 InParanoid:Q6P129 OMA:DEANSYC
NextBio:20809196 Uniprot:Q6P129
Length = 205
Score = 258 (95.9 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 67/189 (35%), Positives = 103/189 (54%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + ++ + G + +K T+ +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDAEIGATIG-----VDFKVKTLAVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G R KL +WDT+GQ RF T+ SY RGAQG++LVYD++ + +F +D WL E+E +
Sbjct: 54 GNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVSRRETFAKLDNWLSELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQR 238
+ K+LVGN++ +R + E +A K+ M F E S ++ +F EL + LQ
Sbjct: 114 DLVKMLVGNKIDKD-DREIEREEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKILQT 172
Query: 239 NGMERLWRS 247
G LW S
Sbjct: 173 PG---LWES 178
Score = 50 (22.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>UNIPROTKB|H3BUX0 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285 EMBL:Z98881
ProteinModelPortal:H3BUX0 SMR:H3BUX0 Ensembl:ENST00000565511
Bgee:H3BUX0 Uniprot:H3BUX0
Length = 130
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 63/95 (66%), Positives = 70/95 (73%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YDYLLKFLLVGDSDVGK EIL L DG++ESP+ +G + YKT
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEILESLQ----------DGAAESPYAYSNG-----IDYKT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQ 149
TTILLDG+RVKL+LWDTSGQGRFCTI RSYSRGAQ
Sbjct: 54 TTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQ 88
Score = 104 (41.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 21/23 (91%), Positives = 21/23 (91%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K YDYLLKFLLVGDSDVGK EIL
Sbjct: 9 KSYDYLLKFLLVGDSDVGKGEIL 31
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 70/176 (39%), Positives = 101/176 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L K +L+GDS VGK +LS RF R + S ES G + + T +
Sbjct: 10 YDFLYKVVLIGDSGVGKSNLLS------RFTRN--EFSLESKSTIG-------VEFATRS 54
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I +D K VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++RWLKE+ +H
Sbjct: 55 IHVDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH 114
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+ +LVGN+ L R V+T +A+ +A + F E S L N+ +FTE+
Sbjct: 115 TEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEV 170
>ZFIN|ZDB-GENE-031118-188 [details] [associations]
symbol:rab11al "RAB11a, member RAS oncogene family,
like" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-188
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
KO:K07904 EMBL:BC055141 IPI:IPI00491156 RefSeq:NP_956417.1
UniGene:Dr.79024 ProteinModelPortal:Q7SY35 SMR:Q7SY35 STRING:Q7SY35
PRIDE:Q7SY35 GeneID:386994 KEGG:dre:386994 CTD:386994
InParanoid:Q7SY35 OrthoDB:EOG4C87T9 NextBio:20814108
ArrayExpress:Q7SY35 Bgee:Q7SY35 Uniprot:Q7SY35
Length = 216
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 74/190 (38%), Positives = 108/190 (56%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYL K +L+GDS VGK +LS RF R + S+S G + +
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFA 49
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ +RWLKE+
Sbjct: 50 TRSIHVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKEL 109
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---- 228
++HA + +LVGN+ L R V EA+ +A K+ ++F E S L N+ +F
Sbjct: 110 QDHADSNIVIMLVGNKSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTIL 169
Query: 229 TELSRRALQR 238
TE+ R QR
Sbjct: 170 TEIYRIVSQR 179
>UNIPROTKB|Q06AU7 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 CTD:81876
KO:K07875 EMBL:DQ917628 RefSeq:NP_001116645.1 UniGene:Ssc.78746
ProteinModelPortal:Q06AU7 SMR:Q06AU7 GeneID:100144502
KEGG:ssc:100144502 Uniprot:Q06AU7
Length = 201
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 74/186 (39%), Positives = 107/186 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +ES + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK +KLQ+WDT+GQ R TI SY RGA GI++VYD+T++ S+ + +WL+E++
Sbjct: 49 TIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDR 108
Query: 176 HAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 109 YASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAE 168
Query: 235 ALQRNG 240
+R G
Sbjct: 169 IKKRMG 174
>TAIR|locus:2057624 [details] [associations]
symbol:ArRABA1h "RAB GTPase homolog A1H" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:U78721 KO:K07976
HOGENOM:HOG000233968 EMBL:DQ446594 IPI:IPI00538868 PIR:F84750
RefSeq:NP_180943.4 UniGene:At.66305 ProteinModelPortal:Q1PEX3
SMR:Q1PEX3 PaxDb:Q1PEX3 PRIDE:Q1PEX3 EnsemblPlants:AT2G33870.1
GeneID:817957 KEGG:ath:AT2G33870 TAIR:At2g33870 InParanoid:P93020
OMA:ELRTHAD PhylomeDB:Q1PEX3 ProtClustDB:CLSN2679642
Genevestigator:Q1PEX3 Uniprot:Q1PEX3
Length = 218
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 70/179 (39%), Positives = 99/179 (55%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ YDYL K +L GDS VGK +LS RF R D S +S G + +
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLS------RFTRN--DFSHDSRSTIG-------VEFA 51
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T +I +D K VK Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++RWLKE+
Sbjct: 52 TRSIQVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
Query: 174 EEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+H + LVGN+ L R ++T E + +A + F E S L N+ +FTE+
Sbjct: 112 RDHTDANTVIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEV 170
>DICTYBASE|DDB_G0272138 [details] [associations]
symbol:rab2B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0272138 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000008 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:Q15907 OMA:EEGLFFM RefSeq:XP_645208.1
ProteinModelPortal:Q559X6 SMR:Q559X6 PRIDE:Q559X6
EnsemblProtists:DDB0229402 GeneID:8618381 KEGG:ddi:DDB_G0272138
Uniprot:Q559X6
Length = 202
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 68/194 (35%), Positives = 114/194 (58%)
Query: 48 KPVVATQKQ--YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGK 105
KP +K Y++L K+++VGDS VGK +L +++ RF + S F G
Sbjct: 10 KPTFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQ-FVDKRF-------APNSDFTIG--- 58
Query: 106 YDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDG 165
+ + + +I ++ K++KLQ+WDT+GQ +F +I R+Y RGA ++VYDIT + SF+
Sbjct: 59 ----VEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFES 114
Query: 166 IDRWLKEVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNI 224
++ WL + + + V VL+GN+ L NR V+T EA+ +A KN + FFE S N+
Sbjct: 115 LNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNV 174
Query: 225 RESFTELSRRALQR 238
E+F + + + L++
Sbjct: 175 DEAFEKSTEQILKK 188
>UNIPROTKB|Q92928 [details] [associations]
symbol:RAB1C "Putative Ras-related protein Rab-1C"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351
EMBL:AL513165 HPA:CAB010225 EMBL:U66622 IPI:IPI00374519
UniGene:Hs.651788 ProteinModelPortal:Q92928 SMR:Q92928
IntAct:Q92928 STRING:Q92928 DMDM:193806493 PRIDE:Q92928
GeneCards:GC09M037629 HGNC:HGNC:23683 neXtProt:NX_Q92928
InParanoid:Q92928 ArrayExpress:Q92928 Genevestigator:Q92928
Uniprot:Q92928
Length = 201
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 74/185 (40%), Positives = 105/185 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD L K LL+GDS VGK S L L RF D +ES + S G + +K T
Sbjct: 5 YDCLFKLLLIGDSGVGK----SCLLL-----RFADDPYTES-YISTIG-----VDFKIQT 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I LDGK +KLQ+WDT+GQ RF TI SY RGA G L+VYD+T++ S+ + +WL+E++ H
Sbjct: 50 IELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRH 109
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V K+LVGN+ L + V A+ +A + F E S N+ ++F ++
Sbjct: 110 ASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
Query: 236 LQRNG 240
++ G
Sbjct: 170 KKQMG 174
>TAIR|locus:2102777 [details] [associations]
symbol:RABA2c "RAB GTPase homolog A2C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504
EMBL:AL096859 KO:K07976 HOGENOM:HOG000233968 EMBL:Y08904
EMBL:AY065380 EMBL:AY096545 EMBL:AY087450 IPI:IPI00527142
PIR:T12965 RefSeq:NP_190267.1 UniGene:At.109 UniGene:At.73032
ProteinModelPortal:Q96283 SMR:Q96283 PaxDb:Q96283 PRIDE:Q96283
EnsemblPlants:AT3G46830.1 GeneID:823836 KEGG:ath:AT3G46830
TAIR:At3g46830 InParanoid:Q96283 OMA:PQGTTIN PhylomeDB:Q96283
ProtClustDB:PLN03110 Genevestigator:Q96283 GermOnline:AT3G46830
Uniprot:Q96283
Length = 217
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 68/175 (38%), Positives = 100/175 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 7 QEYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFAT 51
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T ++GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+
Sbjct: 52 RTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 111
Query: 175 EHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + ++ GN+ L R+V + + A K ++F E S L N+ ++F
Sbjct: 112 DHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAF 166
>DICTYBASE|DDB_G0284985 [details] [associations]
symbol:rab1D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0284985 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0045335
GenomeReviews:CM000153_GR GO:GO:0015031 EMBL:AAFI02000073
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P62820
RefSeq:XP_639975.1 ProteinModelPortal:Q54NU2 SMR:Q54NU2
PRIDE:Q54NU2 EnsemblProtists:DDB0229398 GeneID:8624886
KEGG:ddi:DDB_G0284985 OMA:AKDFADS Uniprot:Q54NU2
Length = 204
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/179 (40%), Positives = 102/179 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
++D+ K LL+GDS VGK S L L RF D S S G + +K
Sbjct: 6 EHDFFFKILLIGDSGVGK----SCLLL-----RF-ADDSWTDTHISTIG-----VDFKIK 50
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ LDGK +KLQ+WDT+GQ RF TI SY RGAQGI+LVYD T++ SF + +W+ E++
Sbjct: 51 TLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDR 110
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
+A V K+LVGN+ L + V + +A+ +A + F E S N+ E F ++R
Sbjct: 111 YACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMAR 169
>TAIR|locus:2024992 [details] [associations]
symbol:RABA2b "RAB GTPase homolog A2B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0009504 "cell plate" evidence=IDA] [GO:0006457
"protein folding" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC022464 KO:K07976
IPI:IPI00522346 PIR:A86209 RefSeq:NP_172221.1 UniGene:At.51514
HSSP:P07560 ProteinModelPortal:Q9LNW1 SMR:Q9LNW1 PaxDb:Q9LNW1
PRIDE:Q9LNW1 EnsemblPlants:AT1G07410.1 GeneID:837253
KEGG:ath:AT1G07410 TAIR:At1g07410 InParanoid:Q9LNW1 OMA:QVDNKTV
Genevestigator:Q9LNW1 Uniprot:Q9LNW1
Length = 214
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/179 (40%), Positives = 102/179 (56%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK ILS RF R + FC S K + + T
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILS------RFTR--------NEFCLES-KSTIGVEFATR 52
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +F+ + RWL+E+ +
Sbjct: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRD 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF-TELS 232
HA + ++ GN+ L R+V + A K ++F E S L NI ++F T LS
Sbjct: 113 HADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 171
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 69/190 (36%), Positives = 108/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGDYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + ++ FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMEIQLFETSAKENINVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKEN 175
>UNIPROTKB|F1S091 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045046 "protein import into peroxisome membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:CU606936 ProteinModelPortal:F1S091 Ensembl:ENSSSCT00000026677
Uniprot:F1S091
Length = 197
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 57/123 (46%), Positives = 79/123 (64%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI LDGK++KLQ+WDT+GQ RF TI +Y RGA GI+LVYDITN+ SFD I W++
Sbjct: 35 FKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIR 94
Query: 172 EVEEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+EEHA V ++++GN+ + R V+ E AI + F E S N+ E+F
Sbjct: 95 NIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFI 154
Query: 231 LSR 233
L+R
Sbjct: 155 LAR 157
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 68/176 (38%), Positives = 100/176 (56%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
++ YDYL K +L+GDS VGK ILS RF R + FC S K + +
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKTNILS------RFTR--------NEFCLES-KSTIGVEFA 50
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
T T+ ++GK VK Q+WDT+GQ R+ I +Y RGA G LLVYDIT + +FD + RWL+E+
Sbjct: 51 TRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLREL 110
Query: 174 EEHAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
+HA + ++ GN+ L R+V + + A ++F E S L N+ ++F
Sbjct: 111 RDHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAF 166
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 69/186 (37%), Positives = 108/186 (58%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ L+G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVELNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ ++ V T +A+ +A + ++ FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPNSKVVETNDAQKFAEQMGISLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRA 235
EL RA
Sbjct: 166 ELVLRA 171
>TAIR|locus:2169053 [details] [associations]
symbol:RABA5a "RAB GTPase homolog A5A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB025628 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:BT004809 EMBL:AK222160
EMBL:AK227772 IPI:IPI00528196 RefSeq:NP_199563.1 UniGene:At.29886
UniGene:At.29887 ProteinModelPortal:Q9FGK5 SMR:Q9FGK5 IntAct:Q9FGK5
PaxDb:Q9FGK5 PRIDE:Q9FGK5 EnsemblPlants:AT5G47520.1 GeneID:834802
KEGG:ath:AT5G47520 TAIR:At5g47520 InParanoid:Q9FGK5 OMA:FARNEFY
PhylomeDB:Q9FGK5 ProtClustDB:CLSN2686382 Genevestigator:Q9FGK5
Uniprot:Q9FGK5
Length = 221
Score = 259 (96.2 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 66/175 (37%), Positives = 95/175 (54%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K DYL K +L+GDS VGK +L+ RF R +S+S G + ++T
Sbjct: 9 KSEDYLFKIVLIGDSAVGKSNLLA------RFARDEFYPNSKSTI--G-------VEFQT 53
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
+ ++GK +K Q+WDT+GQ RF + +Y RGA G LLVYDI+ + +F I RWL E+
Sbjct: 54 QKMDINGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELH 113
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
H+ V +LVGN+ L R V+T E + A + F E S L N+ +F
Sbjct: 114 THSDMNVVTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAF 168
Score = 44 (20.5 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 304 VNKNKYNLLSFSVISLQEL 322
V K YN+LS V+S QEL
Sbjct: 171 VVKEIYNILSRKVMSSQEL 189
>UNIPROTKB|J9NRZ2 [details] [associations]
symbol:RAB18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 InterPro:IPR025662
PROSITE:PS00675 GeneTree:ENSGT00700000104044 OMA:FAKRHRT
EMBL:AAEX03001165 Ensembl:ENSCAFT00000043572 Uniprot:J9NRZ2
Length = 206
Score = 254 (94.5 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
Identities = 68/190 (35%), Positives = 101/190 (53%)
Query: 61 LKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLD 120
LK L++G+S VGK +L RF D + + + G + +K TI +D
Sbjct: 9 LKILIIGESGVGKSSLLL---------RF-TDDTFDPELAATIG-----VDFKVKTISVD 53
Query: 121 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAP-- 178
G + KL +W T+GQ RF T+ SY RGA G++LVYD+T + +F +D WL E+E +
Sbjct: 54 GNKAKLAIWGTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTFVKLDNWLNELETYCTRN 113
Query: 179 GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSP-LCDFNIRESFTELSRRALQ 237
+ +LVGN++ NR V E +A K+ M F E S CD ++ +F EL + +Q
Sbjct: 114 DIVNMLVGNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCD-GVQCAFEELVEKIIQ 171
Query: 238 RNGMERLWRS 247
G LW S
Sbjct: 172 TPG---LWES 178
Score = 50 (22.7 bits), Expect = 4.2e-25, Sum P(2) = 4.2e-25
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 17 LKFLLVGDSDVGKQEIL 33
LK L++G+S VGK +L
Sbjct: 9 LKILIIGESGVGKSSLL 25
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 68/180 (37%), Positives = 105/180 (58%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+Q++YDYL K +L+GDS VGK +LS RF R + S E+ G + +
Sbjct: 6 SQEEYDYLYKIVLIGDSGVGKSNLLS------RFTRN--EFSLETKSTIG-------VEF 50
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
T TI +GK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI + ++ ++RW+ E
Sbjct: 51 ATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILE 110
Query: 173 VEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+ E+A + +LVGN+ L R V+T EA+ ++ K+++ F E S L N+ +F +
Sbjct: 111 LRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNI 170
>DICTYBASE|DDB_G0289827 [details] [associations]
symbol:rab18 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0289827
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR EMBL:AAFI02000149 PROSITE:PS51419
eggNOG:COG1100 KO:K07910 OMA:FAKRHRT RefSeq:XP_636019.1 HSSP:Q9NP72
ProteinModelPortal:Q54GY8 SMR:Q54GY8 PRIDE:Q54GY8
EnsemblProtists:DDB0229409 GeneID:8627345 KEGG:ddi:DDB_G0289827
Uniprot:Q54GY8
Length = 202
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 71/182 (39%), Positives = 101/182 (55%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
D K LL+GDSDVGK I+ RF D E C+ G + +K +
Sbjct: 4 DKQYKVLLIGDSDVGKTSIVK---------RFSDDTFDEDLLCT-IG-----VEFKMKEV 48
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
+DGK+V L +WDT+GQ +F +I SY RGA GI+L YD+T + SFD ++ WL EVE A
Sbjct: 49 KVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFA 108
Query: 178 --PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
+ K+LVGN++ NR VT E +A K M F E S I+++F EL+++
Sbjct: 109 NRSNLVKLLVGNKIDKE-NREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKI 167
Query: 236 LQ 237
++
Sbjct: 168 IE 169
>TAIR|locus:2202280 [details] [associations]
symbol:ARA-2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0003924 "GTPase
activity" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0009733
GO:GO:0015031 GO:GO:0003924 EMBL:AC068143 PROSITE:PS51419
eggNOG:COG1100 UniGene:At.133 UniGene:At.24592 KO:K07976
EMBL:D01024 EMBL:AF332428 EMBL:AY065306 EMBL:AY096439
IPI:IPI00533864 PIR:JS0639 RefSeq:NP_172128.1
ProteinModelPortal:P28185 SMR:P28185 STRING:P28185 PaxDb:P28185
PRIDE:P28185 EnsemblPlants:AT1G06400.1 GeneID:837151
KEGG:ath:AT1G06400 TAIR:At1g06400 HOGENOM:HOG000233968
InParanoid:P28185 OMA:HATFENA PhylomeDB:P28185
ProtClustDB:CLSN2914143 Genevestigator:P28185 GermOnline:AT1G06400
Uniprot:P28185
Length = 216
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 67/178 (37%), Positives = 100/178 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++YDYL K +L+GDS VGK +LS RF + + S+S G + + T
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLS------RFTKNEFNLESKSTI--G-------VEFAT 52
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T ++GK VK Q+WDT+GQ R+ I +Y RGA G LL+YD+T +F+ RWL+E+
Sbjct: 53 KTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELR 112
Query: 175 EHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
H P + +L+GN+ L V T EA+ +A + + F E S L N+ +FTE+
Sbjct: 113 GHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEV 170
>TAIR|locus:2081486 [details] [associations]
symbol:ATFP8 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030742
"GTP-dependent protein binding" evidence=IPI] [GO:0080115 "myosin
XI tail binding" evidence=IPI] [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100
EMBL:AC016795 KO:K07976 HOGENOM:HOG000233968 HSSP:P62820
OMA:AKDFADS EMBL:U64911 EMBL:AK118150 EMBL:BT005576 IPI:IPI00547722
RefSeq:NP_187779.1 UniGene:At.18731 ProteinModelPortal:Q9ZRE2
SMR:Q9ZRE2 IntAct:Q9ZRE2 STRING:Q9ZRE2 PaxDb:Q9ZRE2 PRIDE:Q9ZRE2
EnsemblPlants:AT3G11730.1 GeneID:820345 KEGG:ath:AT3G11730
TAIR:At3g11730 InParanoid:Q9ZRE2 PhylomeDB:Q9ZRE2
ProtClustDB:CLSN2684436 Genevestigator:Q9ZRE2 Uniprot:Q9ZRE2
Length = 205
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 71/188 (37%), Positives = 105/188 (55%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K LL+GDS VGK S L L RF D +S + S G + +K
Sbjct: 4 EYDYLFKLLLIGDSSVGK----SCLLL-----RFADDAYIDS-YISTIG-----VDFKIR 48
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI DGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD T SF+ + +WL E++
Sbjct: 49 TIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDR 108
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRR 234
+A V K+L+GN+ + ++ V+T A + + F E S N+ ++F ++
Sbjct: 109 YANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGE 168
Query: 235 ALQRNGME 242
++ G +
Sbjct: 169 IKKKMGSQ 176
>GENEDB_PFALCIPARUM|PF13_0119 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S G + + T +
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLS------RFTRDEFNLESKSTI--G-------VEFATKS 52
Query: 117 ILL-DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
I L + K +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT K SF+ I++WLKE+ +
Sbjct: 53 IQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRD 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+A + +LVGN+ L R + +A YA K ++AF E S L N+ +F +L
Sbjct: 113 NADSNIVILLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQL 169
>UNIPROTKB|Q76NM4 [details] [associations]
symbol:Rab11a "Rab11a, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844509 GenomeReviews:AL844509_GR KO:K07976
HOGENOM:HOG000233968 OMA:AHEDSPG RefSeq:XP_001349945.1 PDB:3BFK
PDBsum:3BFK ProteinModelPortal:Q76NM4 SMR:Q76NM4
EnsemblProtists:PF13_0119:mRNA GeneID:814090 KEGG:pfa:PF13_0119
EuPathDB:PlasmoDB:PF3D7_1320600 ProtClustDB:CLSZ2433377
EvolutionaryTrace:Q76NM4 Uniprot:Q76NM4
Length = 216
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/177 (40%), Positives = 102/177 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S+S G + + T +
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLS------RFTRDEFNLESKSTI--G-------VEFATKS 52
Query: 117 ILL-DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
I L + K +K Q+WDT+GQ R+ I +Y RGA G LLVYDIT K SF+ I++WLKE+ +
Sbjct: 53 IQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRD 112
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
+A + +LVGN+ L R + +A YA K ++AF E S L N+ +F +L
Sbjct: 113 NADSNIVILLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQL 169
>TAIR|locus:2125384 [details] [associations]
symbol:GB2 "GTP-binding 2" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS;IDA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009507
GO:GO:0007264 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
EMBL:AL031986 EMBL:AL161588 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 UniGene:At.2486 UniGene:At.70211 HOGENOM:HOG000233968
HSSP:P07560 EMBL:U46925 EMBL:AY065262 EMBL:AY117348 EMBL:AY085750
IPI:IPI00520424 IPI:IPI00846466 PIR:S71585 RefSeq:NP_001078499.1
RefSeq:NP_195311.1 ProteinModelPortal:Q38922 SMR:Q38922
IntAct:Q38922 PaxDb:Q38922 PRIDE:Q38922 EnsemblPlants:AT4G35860.1
GeneID:829740 KEGG:ath:AT4G35860 TAIR:At4g35860 InParanoid:Q38922
OMA:HANPNMS PhylomeDB:Q38922 ProtClustDB:PLN03108
Genevestigator:Q38922 Uniprot:Q38922
Length = 211
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 66/182 (36%), Positives = 102/182 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K++++GD+ VGK S L L+ RF G + +
Sbjct: 3 YDYLFKYIIIGDTGVGK----SCLLLQFTDKRF----QPVHDLTIG-------VEFGARM 47
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DG+ +KLQ+WDT+GQ F +I RSY RGA G LLVYDIT + +F+ + WL++ +H
Sbjct: 48 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 107
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L+GN+ LA R V+ E + +A ++ + F E S N+ E+F E + +
Sbjct: 108 ANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKI 167
Query: 236 LQ 237
LQ
Sbjct: 168 LQ 169
>FB|FBgn0016701 [details] [associations]
symbol:Rab4 "Rab4" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006897
"endocytosis" evidence=TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0006897 HSSP:P01112 KO:K07976
GeneTree:ENSGT00690000101805 OMA:SPNIVIL EMBL:AB035670
RefSeq:NP_523777.1 RefSeq:NP_725696.1 RefSeq:NP_995877.1
UniGene:Dm.2700 SMR:Q7KY04 STRING:Q7KY04 EnsemblMetazoa:FBtr0086829
EnsemblMetazoa:FBtr0086830 GeneID:36992 KEGG:dme:Dmel_CG4921
UCSC:CG4921-RA CTD:36992 FlyBase:FBgn0016701 InParanoid:Q7KY04
OrthoDB:EOG4V9S6N ChiTaRS:RAB4A GenomeRNAi:36992 NextBio:801393
Uniprot:Q7KY04
Length = 213
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/183 (38%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL KFL++G + GK +L ++ES+F D SS + G + + +
Sbjct: 5 YDYLFKFLIIGSAGSGKSCLLHH-FIESKFK----DDSSHT---IG-------VEFGSRI 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYD T++ SF+ + WL +
Sbjct: 50 VNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +LVGN+ L R VT EA +A +N++ F E S N+ E+F + S+
Sbjct: 110 ASPNIVILLVGNKKDLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LAK 172
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/190 (36%), Positives = 108/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++ DY+ K +L+GDS VGK ++L+ RF R + S ES G + ++T
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQLLA------RFSRN--EFSIESKATIG-------VEFQT 54
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +D K +K Q+WDT+GQ R+ + +Y RGA G +LVYDIT + SFD + RWL+E+
Sbjct: 55 RTLEIDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELR 114
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF----T 229
HA + +L+GN+ L R V T +A+ +A + + F E S L N+ SF T
Sbjct: 115 GHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLT 174
Query: 230 ELSRRALQRN 239
E+ R ++N
Sbjct: 175 EIYRIVSKKN 184
>GENEDB_PFALCIPARUM|PF08_0110 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 73/205 (35%), Positives = 111/205 (54%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYLLK LLVGDS VGK IL Y +++F E S G + +K
Sbjct: 4 KNKYDYLLKLLLVGDSSVGKSSILCR-YSDNQF---------EEKVLSTIG-----IDFK 48
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
+ +D K +K+ +WDT+GQ RF T+ +Y R A I+LVYD T + SF+ +D W+ E+
Sbjct: 49 VKYLKIDNKTIKVGIWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEI 108
Query: 174 EEHAPG--VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++++ K+LV N++ N VT E + +A +N M F E S D NI F EL
Sbjct: 109 DKYSTNKNAIKMLVANKIDKP-NHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEEL 167
Query: 232 SRRALQRNGMERL---WRSNKVGRK 253
++ L + L ++ K+G+K
Sbjct: 168 IQQILNNPSLLELSIVTKNLKLGKK 192
>UNIPROTKB|Q7K6B0 [details] [associations]
symbol:rab18 "PfRab18, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
EMBL:AL844507 HOGENOM:HOG000233968 KO:K07910
GenomeReviews:AL844507_GR RefSeq:XP_001349449.1 HSSP:P10114
ProteinModelPortal:Q7K6B0 EnsemblProtists:PF08_0110:mRNA
GeneID:2655310 KEGG:pfa:PF08_0110 EuPathDB:PlasmoDB:PF3D7_0807300
OMA:PNISATI ProtClustDB:CLSZ2433229 Uniprot:Q7K6B0
Length = 201
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 73/205 (35%), Positives = 111/205 (54%)
Query: 54 QKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYK 113
+ +YDYLLK LLVGDS VGK IL Y +++F E S G + +K
Sbjct: 4 KNKYDYLLKLLLVGDSSVGKSSILCR-YSDNQF---------EEKVLSTIG-----IDFK 48
Query: 114 TTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEV 173
+ +D K +K+ +WDT+GQ RF T+ +Y R A I+LVYD T + SF+ +D W+ E+
Sbjct: 49 VKYLKIDNKTIKVGIWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLDVWINEI 108
Query: 174 EEHAPG--VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
++++ K+LV N++ N VT E + +A +N M F E S D NI F EL
Sbjct: 109 DKYSTNKNAIKMLVANKIDKP-NHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEEL 167
Query: 232 SRRALQRNGMERL---WRSNKVGRK 253
++ L + L ++ K+G+K
Sbjct: 168 IQQILNNPSLLELSIVTKNLKLGKK 192
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 71/180 (39%), Positives = 103/180 (57%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
K YD ++K LL+GDS VGK +L ++E +F F + G + +K
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVR-FVEDKF---------NPSFITTIG-----IDFKI 59
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ ++GK+VKLQLWDT+GQ RF TI +Y RGA GI+LVYD+T++ +F I +W K V
Sbjct: 60 KTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVN 119
Query: 175 EHAPGVPKVL-VGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
EHA ++L VGN+ + R VT + E A + + F E S D N+ E F L++
Sbjct: 120 EHANDEAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178
>TAIR|locus:2035302 [details] [associations]
symbol:RABA3 "RAB GTPase homolog A3" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005768 "endosome" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC023628 KO:K07976
HOGENOM:HOG000233968 HSSP:P20339 EMBL:BT010707 EMBL:BT010979
IPI:IPI00532357 PIR:B86142 RefSeq:NP_171628.2 UniGene:At.42661
ProteinModelPortal:Q9LNK1 SMR:Q9LNK1 IntAct:Q9LNK1 PaxDb:Q9LNK1
PRIDE:Q9LNK1 EnsemblPlants:AT1G01200.1 GeneID:839493
KEGG:ath:AT1G01200 TAIR:At1g01200 InParanoid:Q9LNK1 OMA:HADDSAV
PhylomeDB:Q9LNK1 ProtClustDB:CLSN2690626 Genevestigator:Q9LNK1
Uniprot:Q9LNK1
Length = 237
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 74/195 (37%), Positives = 109/195 (55%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++ DY+ K +++GDS VGK ++LS RF + + FC S K + ++T
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLS---------RF-----THNEFCYDS-KSTIGVEFQT 67
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
TI L GK VK Q+WDT+GQ R+ + +Y RGA G ++VYDIT + SFD + RW++E+
Sbjct: 68 RTITLRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELR 127
Query: 175 EHAPGVPKV-LVGNRLHLAFN-RTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL- 231
HA + LVGN+ L+ R V T +A +A ++ F EVS L N+ E+F L
Sbjct: 128 AHADDSAVIMLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLL 187
Query: 232 ----SRRALQRNGME 242
SR + R ME
Sbjct: 188 EEIFSRVVVSRKAME 202
>UNIPROTKB|Q5ZIP7 [details] [associations]
symbol:RAB5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
[GO:0051489 "regulation of filopodium assembly" evidence=IEA]
[GO:2000286 "receptor internalization involved in canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0045121 GO:GO:0030139 GO:GO:0001726 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:AADN02001071 EMBL:AADN02001072 EMBL:AJ720737
IPI:IPI00596261 RefSeq:NP_001006363.1 UniGene:Gga.21473 SMR:Q5ZIP7
STRING:Q5ZIP7 Ensembl:ENSGALT00000018393 GeneID:420649
KEGG:gga:420649 InParanoid:Q5ZIP7 NextBio:20823533 Uniprot:Q5ZIP7
Length = 215
Score = 260 (96.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 66/192 (34%), Positives = 103/192 (53%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +F F ES G+ A+ T T+ LD
Sbjct: 22 KLVLLGESAVGKSSLVLR-FVKGQFHEF-----QESTI--GA-------AFLTQTVCLDD 66
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN+ SF W+KE++ A P +
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V +EA+ YA N + F E S N+ E F ++++ L +N
Sbjct: 127 VIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKK-LPKNE 185
Query: 241 MERLWRSNKVGR 252
+ S+ GR
Sbjct: 186 PQNTGASSARGR 197
Score = 39 (18.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 22 KLVLLGESAVGKSSLV 37
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/177 (37%), Positives = 99/177 (55%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS + ++ F S ES G + + T
Sbjct: 9 EYDYLFKVVLIGDSGVGKSNLLSR-FTKNEF-------SLESKSTIG-------VEFATR 53
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
++ +D K +K Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++ WLKE+
Sbjct: 54 SLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRN 113
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
H P + +LVGN+ L V T +A+ +A K + F E S L N+ +F E+
Sbjct: 114 HTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEV 170
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/190 (36%), Positives = 107/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + + FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKDN 175
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/190 (36%), Positives = 107/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + + FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKDN 175
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/190 (36%), Positives = 107/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + + FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKDN 175
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 69/190 (36%), Positives = 107/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K L++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + + FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKDN 175
>DICTYBASE|DDB_G0269174 [details] [associations]
symbol:rab1C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269174 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P55258 EMBL:AB015237
RefSeq:XP_646027.1 ProteinModelPortal:O76173 SMR:O76173
PRIDE:O76173 EnsemblProtists:DDB0191203 GeneID:8616975
KEGG:ddi:DDB_G0269174 OMA:CIRTIEL Uniprot:O76173
Length = 201
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 71/178 (39%), Positives = 102/178 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YD LLK L++GDS VGK +L + ++RF ++ FC
Sbjct: 29 EYDMLLKILVIGDSGVGKSCMLLR-FADNRFTDSYISTIGVD-FC-------------IR 73
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
TI LDGK++KLQ+WDT+GQ RF TI SY RGA G+++VYDIT+ SF+ I RWL +V+
Sbjct: 74 TIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDR 133
Query: 176 HA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
A P V K++VGN+ L R V + A+ +A + + E S I E+F +L+
Sbjct: 134 FASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLA 191
>FB|FBgn0015791 [details] [associations]
symbol:Rab14 "Rab14" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 HSSP:P07560 CTD:51552 GeneTree:ENSGT00690000101805
KO:K07881 OMA:GVQHKPA ChiTaRS:RAB14 UniGene:Dm.6742 GeneID:34840
KEGG:dme:Dmel_CG4212 FlyBase:FBgn0015791 GenomeRNAi:34840
NextBio:790484 RefSeq:NP_788056.1 ProteinModelPortal:Q86BK8
SMR:Q86BK8 STRING:Q86BK8 PRIDE:Q86BK8 EnsemblMetazoa:FBtr0080627
UCSC:CG4212-RB InParanoid:Q86BK8 PhylomeDB:Q86BK8
ArrayExpress:Q86BK8 Bgee:Q86BK8 Uniprot:Q86BK8
Length = 239
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 74/229 (32%), Positives = 118/229 (51%)
Query: 43 WLMETKP-VVATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCS 101
+ +E P + A Y+Y+ K++++GD VGK +L + E +F + P
Sbjct: 17 YFIEKCPNMTAAPYNYNYIFKYIIIGDMGVGKSCLLHQ-FTEKKF-------MANCPHTI 68
Query: 102 GSGKYDDMLAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKW 161
G + + T I +D K++KLQ+WDT+GQ RF + RSY RGA G L+VYDIT +
Sbjct: 69 G-------VEFGTRIIEVDDKKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRS 121
Query: 162 SFDGIDRWLKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLC 220
+++ + WL + P L+GN+ L R VT EA+ +A +N + F E S +
Sbjct: 122 TYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYEEAKEFADENGLMFLEASAMT 181
Query: 221 DFNIRESFTELSRRALQRNGMERL-WRSNKVGRKPLINFESFTELSRRA 268
N+ E+F E +R+ Q RL +++ G + + S T LS A
Sbjct: 182 GQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTSLSSEA 230
>UNIPROTKB|Q29RR0 [details] [associations]
symbol:RAB26 "Ras-related protein Rab-26" species:9913 "Bos
taurus" [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031226 "intrinsic to plasma membrane" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0035272 "exocrine
system development" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0031226 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104031
EMBL:BC114066 IPI:IPI00702165 RefSeq:NP_001039674.1
UniGene:Bt.13735 ProteinModelPortal:Q29RR0 SMR:Q29RR0 PRIDE:Q29RR0
Ensembl:ENSBTAT00000000348 GeneID:515675 KEGG:bta:515675 CTD:25837
InParanoid:Q29RR0 KO:K07913 OMA:PSEPRFR OrthoDB:EOG4VMFG9
NextBio:20871955 GO:GO:0035272 Uniprot:Q29RR0
Length = 256
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 69/184 (37%), Positives = 102/184 (55%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD K +LVGDS VGK +L RF DG+ F +G+ + ++
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLV------RFK----DGA----FLAGTFISTVGIDFRNKV 105
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ +DG +VKLQ+WDT+GQ RF ++ +Y R A +LL+YD+TNK SFD I WL E++EH
Sbjct: 106 VDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEH 165
Query: 177 APG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A V +L+GN++ A R V +AE A + F E S N+ +FT +++
Sbjct: 166 AQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
Query: 236 LQRN 239
QR+
Sbjct: 226 KQRH 229
>UNIPROTKB|Q2TBH7 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GeneTree:ENSGT00690000101805 EMBL:BC110198 IPI:IPI00843020
RefSeq:NP_001033774.1 UniGene:Bt.91385 ProteinModelPortal:Q2TBH7
SMR:Q2TBH7 STRING:Q2TBH7 PRIDE:Q2TBH7 Ensembl:ENSBTAT00000049768
GeneID:615849 KEGG:bta:615849 CTD:5867 InParanoid:Q2TBH7 KO:K07879
OrthoDB:EOG4WM4VM NextBio:20899821 Uniprot:Q2TBH7
Length = 218
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 67/188 (35%), Positives = 108/188 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + YD+L KFL++G++ GK +L ++E +F D S+ + G +
Sbjct: 5 AMSETYDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VE 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ + I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL
Sbjct: 50 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 109
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+ A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F +
Sbjct: 110 DARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQ 169
Query: 231 LSRRALQR 238
+R+ L +
Sbjct: 170 CARKILNK 177
>UNIPROTKB|E2QTP7 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AAEX03002724 Ensembl:ENSCAFT00000019425 Uniprot:E2QTP7
Length = 218
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 67/188 (35%), Positives = 108/188 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + YD+L KFL++G++ GK +L ++E +F D S+ + G +
Sbjct: 5 AMSETYDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VE 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ + I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL
Sbjct: 50 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 109
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+ A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F +
Sbjct: 110 DARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQ 169
Query: 231 LSRRALQR 238
+R+ L +
Sbjct: 170 CARKILNK 177
>UNIPROTKB|P20338 [details] [associations]
symbol:RAB4A "Ras-related protein Rab-4A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0007264 GO:GO:0008565 GO:GO:0003924 EMBL:CH471098
GO:GO:0055037 GO:GO:0030100 PROSITE:PS51419 GO:GO:0001671
GO:GO:0032593 eggNOG:COG1100 GO:GO:0019003 EMBL:AL117350
HOVERGEN:HBG009351 CTD:5867 KO:K07879 OrthoDB:EOG4WM4VM EMBL:M28211
EMBL:AY585832 EMBL:AF498934 EMBL:AK313807 EMBL:AL162595
EMBL:BC002438 EMBL:BC004309 IPI:IPI00480056 PIR:E34323
RefSeq:NP_004569.2 UniGene:Hs.296169 PDB:1YU9 PDB:1Z0K PDB:2BMD
PDB:2BME PDBsum:1YU9 PDBsum:1Z0K PDBsum:2BMD PDBsum:2BME
ProteinModelPortal:P20338 SMR:P20338 DIP:DIP-372N IntAct:P20338
MINT:MINT-1376149 STRING:P20338 PhosphoSite:P20338 DMDM:29337213
PaxDb:P20338 PRIDE:P20338 DNASU:5867 Ensembl:ENST00000366690
GeneID:5867 KEGG:hsa:5867 UCSC:uc001hth.3 GeneCards:GC01P229406
HGNC:HGNC:9781 HPA:CAB004990 MIM:179511 neXtProt:NX_P20338
PharmGKB:PA34141 InParanoid:P20338 EvolutionaryTrace:P20338
GenomeRNAi:5867 NextBio:22786 Bgee:P20338 CleanEx:HS_RAB4A
Genevestigator:P20338 GermOnline:ENSG00000168118 Uniprot:P20338
Length = 218
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 67/188 (35%), Positives = 108/188 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + YD+L KFL++G++ GK +L ++E +F D S+ + G +
Sbjct: 5 AMSETYDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VE 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ + I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL
Sbjct: 50 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 109
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+ A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F +
Sbjct: 110 DARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQ 169
Query: 231 LSRRALQR 238
+R+ L +
Sbjct: 170 CARKILNK 177
>MGI|MGI:105069 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001671 "ATPase activator activity" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IDA] [GO:0016020
"membrane" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0019905 "syntaxin binding" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0032482 "Rab protein
signal transduction" evidence=ISO] [GO:0032593 "insulin-responsive
compartment" evidence=ISO] [GO:0032781 "positive regulation of
ATPase activity" evidence=ISO] [GO:0035255 "ionotropic glutamate
receptor binding" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0051117 "ATPase
binding" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] Reactome:REACT_88307 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:105069 GO:GO:0005525 TIGRFAMs:TIGR00231
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0016020 GO:GO:0008565
GO:GO:0005768 GO:GO:0003924 GO:GO:0030100 PROSITE:PS51419
EMBL:CH466525 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AC147266 OrthoDB:EOG4WM4VM EMBL:D86563 EMBL:AB232591
EMBL:AK136566 EMBL:AK161877 IPI:IPI00113127 UniGene:Mm.9221
ProteinModelPortal:P56371 SMR:P56371 MINT:MINT-255793 STRING:P56371
PhosphoSite:P56371 PaxDb:P56371 PRIDE:P56371
Ensembl:ENSMUST00000117702 Ensembl:ENSMUST00000118535
InParanoid:P56371 CleanEx:MM_RAB4A Genevestigator:P56371
GermOnline:ENSMUSG00000019478 Uniprot:P56371
Length = 218
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 67/188 (35%), Positives = 108/188 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + YD+L KFL++G++ GK +L ++E +F D S+ + G +
Sbjct: 5 AMSETYDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VE 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ + I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL
Sbjct: 50 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 109
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+ A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F +
Sbjct: 110 DARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQ 169
Query: 231 LSRRALQR 238
+R+ L +
Sbjct: 170 CARKILNK 177
>TAIR|locus:2124092 [details] [associations]
symbol:RABA1d "RAB GTPase homolog A1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0032588 "trans-Golgi network
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0007264 GO:GO:0031901
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588 EMBL:AL161549
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL035526
KO:K07976 HOGENOM:HOG000233968 ProtClustDB:CLSN2685455
EMBL:BT003901 EMBL:BT004936 EMBL:AK228509 IPI:IPI00535318
PIR:T04872 RefSeq:NP_193615.1 UniGene:At.24230 HSSP:P20339
ProteinModelPortal:Q9SN35 SMR:Q9SN35 IntAct:Q9SN35 PaxDb:Q9SN35
PRIDE:Q9SN35 EnsemblPlants:AT4G18800.1 GeneID:827614
KEGG:ath:AT4G18800 TAIR:At4g18800 InParanoid:Q9SN35 OMA:AMGTRDD
PhylomeDB:Q9SN35 Genevestigator:Q9SN35 Uniprot:Q9SN35
Length = 214
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/176 (37%), Positives = 100/176 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YDYL K +L+GDS VGK +LS RF R + S ES G + + T +
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLS------RFTRN--EFSLESKSTIG-------VEFATRS 54
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ ++ K +K Q+WDT+GQ R+ I +Y RGA G LLVYD+T +F+ ++RWL+E+ +H
Sbjct: 55 LNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDH 114
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
P + +LVGN+ L V T +A+ +A + F E S L N+ +F+E+
Sbjct: 115 TDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEV 170
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/176 (36%), Positives = 100/176 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKT 114
++ DY+ K +L+GDS VGK +IL+ Y F S +S G + ++T
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILAR-YARDEF-------SLDSKATIG-------VEFQT 56
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+++D K VK Q+WDT+GQ R+ + +Y RGA G +LVYDIT + +FD I RWL+E+
Sbjct: 57 RTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELR 116
Query: 175 EHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
HA + +L+GN+ L R + T +A+ +A K + F E S N+ +F+
Sbjct: 117 AHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFS 172
>RGD|3529 [details] [associations]
symbol:Rab4a "RAB4A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001671 "ATPase activator activity"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA;ISO;ISS;IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISO;ISS;IDA;TAS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005768 "endosome" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS;IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA;ISO] [GO:0015031 "protein transport"
evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0019003
"GDP binding" evidence=IEA;ISO;ISS] [GO:0019905 "syntaxin binding"
evidence=IPI] [GO:0030100 "regulation of endocytosis"
evidence=IEA;ISO] [GO:0032482 "Rab protein signal transduction"
evidence=IC;IMP] [GO:0032593 "insulin-responsive compartment"
evidence=IDA] [GO:0032781 "positive regulation of ATPase activity"
evidence=IDA] [GO:0035255 "ionotropic glutamate receptor binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0051117 "ATPase binding" evidence=IDA] [GO:0055037
"recycling endosome" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:3529 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0008565 GO:GO:0003924 GO:GO:0055037 GO:GO:0030100
PROSITE:PS51419 GO:GO:0001671 GO:GO:0032593 GO:GO:0051117
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5867 KO:K07879 EMBL:X06890 EMBL:BC062016
IPI:IPI00325763 PIR:S01766 RefSeq:NP_037151.2 UniGene:Rn.3016
ProteinModelPortal:P05714 SMR:P05714 STRING:P05714 PRIDE:P05714
Ensembl:ENSRNOT00000023771 GeneID:25532 KEGG:rno:25532 UCSC:RGD:3529
InParanoid:P05714 NextBio:607033 ArrayExpress:P05714
Genevestigator:P05714 GermOnline:ENSRNOG00000017467 Uniprot:P05714
Length = 218
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 67/188 (35%), Positives = 108/188 (57%)
Query: 52 ATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA 111
A + YD+L KFL++G++ GK +L ++E +F D S+ + G +
Sbjct: 5 AMSETYDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VE 49
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+ + I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL
Sbjct: 50 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 109
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+ A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F +
Sbjct: 110 DARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQ 169
Query: 231 LSRRALQR 238
+R+ L +
Sbjct: 170 CARKILNK 177
>WB|WBGene00004278 [details] [associations]
symbol:rab-19 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL132865 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OMA:LIGDCGT HSSP:P32939
RefSeq:NP_502576.1 ProteinModelPortal:Q9U1W9 SMR:Q9U1W9
EnsemblMetazoa:Y62E10A.9.1 EnsemblMetazoa:Y62E10A.9.2
EnsemblMetazoa:Y62E10A.9.3 EnsemblMetazoa:Y62E10A.9.4 GeneID:178301
KEGG:cel:CELE_Y62E10A.9 UCSC:Y62E10A.9.2 CTD:178301
WormBase:Y62E10A.9 InParanoid:Q9U1W9 NextBio:900570 Uniprot:Q9U1W9
Length = 210
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 72/178 (40%), Positives = 98/178 (55%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
+DYL K +LVGD VGK ++ RF +G+ F G + + T
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQ---------RF-RNGT----FVDRQGTTIGV-DFTMKT 51
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+++DGKRVKLQ+WDT GQ RF TI +SY R A GI+L YDIT K SF + RW+ +V +
Sbjct: 52 LVVDGKRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKF 111
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQM-AFFEVSPLCDFNIRESFTELS 232
A P V K+L+G + L R + EAEM N M A E S + N+ +F EL+
Sbjct: 112 AAPNVVKLLIGTKCDLEDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFLELA 169
>ZFIN|ZDB-GENE-041212-69 [details] [associations]
symbol:rab25a "RAB25, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041212-69 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:57111 EMBL:BC086715 IPI:IPI00488879 RefSeq:NP_001008641.1
UniGene:Dr.81751 ProteinModelPortal:Q5PRC5 SMR:Q5PRC5 GeneID:494098
KEGG:dre:494098 InParanoid:Q5PRC5 NextBio:20865605
ArrayExpress:Q5PRC5 Uniprot:Q5PRC5
Length = 210
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 68/199 (34%), Positives = 109/199 (54%)
Query: 51 VATQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDML 110
+ T Y+++ K +L+G+S VGK +LS RF + + S + G +
Sbjct: 1 MGTDLAYNFVFKVVLIGESGVGKSNLLS------RFTKNEFNHDSRTTI--G-------V 45
Query: 111 AYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWL 170
+ T ++ +D +K Q+WDT+G R+ I +Y RGA G LLVYDIT +++ ++RWL
Sbjct: 46 EFSTRSVQVDSITIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWL 105
Query: 171 KEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFT 229
KE+ +HA P + +LVGN+ LA RTV T EA+ +A N + F E S L N+ +F
Sbjct: 106 KELYDHADPHIVVMLVGNKNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFL 165
Query: 230 ELSRRALQRNGMERLWRSN 248
E+ Q+ + + R +
Sbjct: 166 EVLTAIHQKVASKEVTRGS 184
>CGD|CAL0002519 [details] [associations]
symbol:SEC4 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IGI;ISS] [GO:0006906 "vesicle fusion"
evidence=IGI] [GO:0006903 "vesicle targeting" evidence=IGI]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0005934
"cellular bud tip" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0006893 "Golgi to plasma
membrane transport" evidence=IMP] [GO:0031521 "spitzenkorper"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0005934 GO:GO:0003924 GO:GO:0009306
GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030658
GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0000131 GO:GO:0006906 GO:GO:0031521 KO:K07901
RefSeq:XP_718237.1 RefSeq:XP_718333.1 ProteinModelPortal:P0CY31
SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032 GeneID:3640119
KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571 Uniprot:P0CY31
Length = 210
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 67/181 (37%), Positives = 101/181 (55%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ + YD ++K LLVGDS VGK +L ++E +F F + G + +
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLR-FVEDKF---------NPSFITTIG-----IDF 51
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI GKR+KLQ+WDT+GQ RF TI +Y RGA GI+L+YD+T+ SF+ ++ W +
Sbjct: 52 KIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQT 111
Query: 173 VEEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
V +HA ++ LVGN+ NR V+ + + A K + F E S + N+ F EL
Sbjct: 112 VTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYEL 171
Query: 232 S 232
+
Sbjct: 172 A 172
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 68/190 (35%), Positives = 107/190 (56%)
Query: 55 KQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLA--Y 112
+ YD+L K +++GDS VGK +L RF +++ F SG Y + +
Sbjct: 3 RDYDHLFKLVIIGDSGVGKSSLLL---------RF-----ADNTF---SGSYITTIGVDF 45
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K T+ ++G++VKLQ+WDT+GQ RF TI +Y RG G+++VYD+T+ SF + RWL E
Sbjct: 46 KIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHE 105
Query: 173 VEEHAPGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF---T 229
+ ++ V ++LVGN+ + V T +A +A + + FE S + N+ E F T
Sbjct: 106 INQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
Query: 230 ELSRRALQRN 239
EL RA + N
Sbjct: 166 ELVLRAKKDN 175
>UNIPROTKB|P0CY31 [details] [associations]
symbol:SEC4 "Ras-related protein SEC4" species:237561
"Candida albicans SC5314" [GO:0000131 "incipient cellular bud site"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IGI;ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005934 "cellular
bud tip" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IGI;ISS] [GO:0006887 "exocytosis" evidence=IMP]
[GO:0006893 "Golgi to plasma membrane transport" evidence=IMP]
[GO:0006903 "vesicle targeting" evidence=IGI] [GO:0006906 "vesicle
fusion" evidence=IGI] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0031521 "spitzenkorper" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0005934 GO:GO:0003924
GO:GO:0009306 GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419
GO:GO:0030658 GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0000131 GO:GO:0006906 GO:GO:0031521
KO:K07901 RefSeq:XP_718237.1 RefSeq:XP_718333.1
ProteinModelPortal:P0CY31 SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032
GeneID:3640119 KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571
Uniprot:P0CY31
Length = 210
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 67/181 (37%), Positives = 101/181 (55%)
Query: 53 TQKQYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAY 112
+ + YD ++K LLVGDS VGK +L ++E +F F + G + +
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLR-FVEDKF---------NPSFITTIG-----IDF 51
Query: 113 KTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKE 172
K TI GKR+KLQ+WDT+GQ RF TI +Y RGA GI+L+YD+T+ SF+ ++ W +
Sbjct: 52 KIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQT 111
Query: 173 VEEHAPGVPKV-LVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
V +HA ++ LVGN+ NR V+ + + A K + F E S + N+ F EL
Sbjct: 112 VTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYEL 171
Query: 232 S 232
+
Sbjct: 172 A 172
>TAIR|locus:2079631 [details] [associations]
symbol:RABA5b "RAB GTPase homolog A5B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC009853 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY072444 EMBL:BT002173
IPI:IPI00541946 RefSeq:NP_187397.1 UniGene:At.43319
UniGene:At.48630 ProteinModelPortal:Q9SRS5 SMR:Q9SRS5 IntAct:Q9SRS5
PaxDb:Q9SRS5 PRIDE:Q9SRS5 EnsemblPlants:AT3G07410.1 GeneID:819929
KEGG:ath:AT3G07410 TAIR:At3g07410 InParanoid:Q9SRS5 OMA:EEGLFFM
PhylomeDB:Q9SRS5 ProtClustDB:CLSN2683060 Genevestigator:Q9SRS5
Uniprot:Q9SRS5
Length = 217
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 81/229 (35%), Positives = 121/229 (52%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
+YL K +L+GDS VGK +LS RF R D +S++ G + ++T +
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLS------RFSRDEFDTNSKATI--G-------VEFQTQLV 54
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
++GK VK Q+WDT+GQ RF + +Y RGA G L+VYDIT +F+ + RWL+E+ H
Sbjct: 55 EIEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHC 114
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
V ++LVGN+ L R V+ E + A + + F E S L N+ ++F + R
Sbjct: 115 DTAVAQMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIF 174
Query: 237 QRNGMERLWRSNKVGRKPLINFESF-TELS--RRALQRN--GMERLWRS 280
N V RK L+N +++ ELS R +L N G E WR+
Sbjct: 175 -----------NNVSRK-LLNSDAYKAELSVNRVSLVNNQDGSESSWRN 211
>ZFIN|ZDB-GENE-070620-7 [details] [associations]
symbol:zgc:165464 "zgc:165464" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070620-7 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
KO:K07925 OMA:TKSDRRC EMBL:CT025910 EMBL:BC142804 IPI:IPI00485605
RefSeq:NP_001092211.1 UniGene:Dr.111079 Ensembl:ENSDART00000019199
GeneID:562596 KEGG:dre:562596 NextBio:20884483 Uniprot:A5PLA1
Length = 213
Score = 252 (93.8 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 72/220 (32%), Positives = 113/220 (51%)
Query: 59 YLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTIL 118
Y + +++GDS VGK ++ + E RF + P G + ++ +
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRR-FTEGRFAQV------SDPTV-GVDFFSRLVEIEP---- 54
Query: 119 LDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA- 177
GKR+KLQ+WDT+GQ RF +I R+Y R + G LL++DITN+ SF + WL+E H
Sbjct: 55 --GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQ 112
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
P + +LVG++ L R V+ +EAE A M + E S N+ ++FTEL+R
Sbjct: 113 PHSIVFILVGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVEKAFTELTRDIF 172
Query: 237 Q--RNG---MERLWRSNKVGRKPLI--NFESFTELSRRAL 269
+ + G ++ W K G P + + E T+ RR L
Sbjct: 173 ELVKCGDITIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCL 212
Score = 43 (20.2 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 15 YLLKFLLVGDSDVGK 29
Y + +++GDS VGK
Sbjct: 7 YQFRLIVIGDSTVGK 21
>UNIPROTKB|E1C8H0 [details] [associations]
symbol:RAB4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0008565 GO:GO:0005768 GO:GO:0003924 GO:GO:0030100
GO:GO:0019003 GeneTree:ENSGT00690000101805 OMA:DESNHTI
EMBL:AADN02035654 EMBL:AADN02035655 EMBL:AADN02035652
EMBL:AADN02035653 IPI:IPI00591536 Ensembl:ENSGALT00000018060
Uniprot:E1C8H0
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G++ GK +L ++E +F D S+ + G + + +
Sbjct: 5 YDFLFKFLVIGNAGTGKSCLLHQ-FIEKKFK----DDSNHT---IG-------VEFGSKI 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
I + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 INVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARML 109
Query: 177 AP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F + +R+
Sbjct: 110 ASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>UNIPROTKB|G3MYN4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
OMA:MIMASEI EMBL:DAAA02063587 Ensembl:ENSBTAT00000064628
Uniprot:G3MYN4
Length = 197
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 70/176 (39%), Positives = 102/176 (57%)
Query: 58 DYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTI 117
DYL K LL+GDS VGK S L L RF D +ES + S G + +K TI
Sbjct: 1 DYLFKLLLIGDSGVGK----SCLLL-----RFADDTYTES-YISTIG-----VDFKIRTI 45
Query: 118 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA 177
LDGK +KLQ+WDT+GQ RF TI SY RGA GI++VYD+T++ S+ + +WL+E++ +A
Sbjct: 46 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYA 105
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELS 232
V K++VGN+ L + V A+ +A + F S N+ ++F ++
Sbjct: 106 SENVNKLIVGNKSDLTTKKVVDNTTAKEFADSLGIPFLRTSAKNATNVEQAFMTMA 161
>UNIPROTKB|J9PAQ4 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101805 EMBL:AAEX03000940
Ensembl:ENSCAFT00000047873 Uniprot:J9PAQ4
Length = 224
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 17 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 61
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 62 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 121
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 122 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 181
Query: 236 LQR 238
L +
Sbjct: 182 LNK 184
>UNIPROTKB|P61017 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9615
"Canis lupus familiaris" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM
EMBL:X56389 PIR:F36364 RefSeq:NP_001003275.1 UniGene:Cfa.3813
ProteinModelPortal:P61017 SMR:P61017 PRIDE:P61017 GeneID:403956
KEGG:cfa:403956 CTD:53916 InParanoid:P61017 KO:K07880
NextBio:20817446 Uniprot:P61017
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>UNIPROTKB|P61018 [details] [associations]
symbol:RAB4B "Ras-related protein Rab-4B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0016192 "vesicle-mediated transport" evidence=NAS] [GO:0005622
"intracellular" evidence=NAS] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
UniGene:Hs.631539 UniGene:Hs.730737 GermOnline:ENSG00000167578
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:AF087861 EMBL:AF165522 EMBL:AF217985 EMBL:AF498935
EMBL:BC046927 IPI:IPI00187143 IPI:IPI00477489 RefSeq:NP_057238.3
PDB:2O52 PDBsum:2O52 ProteinModelPortal:P61018 SMR:P61018
STRING:P61018 PhosphoSite:P61018 DMDM:46577635 PaxDb:P61018
PRIDE:P61018 DNASU:53916 Ensembl:ENST00000357052 GeneID:53916
KEGG:hsa:53916 UCSC:uc002opd.2 UCSC:uc002opf.2
GeneCards:GC19P041284 HGNC:HGNC:9782 MIM:612945 neXtProt:NX_P61018
PharmGKB:PA34142 InParanoid:P61018 OMA:SPNIVIL
EvolutionaryTrace:P61018 GenomeRNAi:53916 NextBio:56222
ArrayExpress:P61018 Bgee:P61018 CleanEx:HS_RAB4B
Genevestigator:P61018 Uniprot:P61018
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>UNIPROTKB|F2Z507 [details] [associations]
symbol:RAB4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101805 KO:K07880 OMA:SPNIVIL
EMBL:FP325213 RefSeq:XP_003127192.1 RefSeq:XP_003481903.1
ProteinModelPortal:F2Z507 SMR:F2Z507 PRIDE:F2Z507
Ensembl:ENSSSCT00000003328 GeneID:100523381 KEGG:ssc:100523381
Uniprot:F2Z507
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>MGI|MGI:105071 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105071 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:AF408432 EMBL:AK005314 EMBL:BC007147
IPI:IPI00271059 RefSeq:NP_083667.1 UniGene:Mm.482114
ProteinModelPortal:Q91ZR1 SMR:Q91ZR1 STRING:Q91ZR1 PRIDE:Q91ZR1
Ensembl:ENSMUST00000093040 GeneID:19342 KEGG:mmu:19342
InParanoid:Q91ZR1 NextBio:296351 Bgee:Q91ZR1 Genevestigator:Q91ZR1
GermOnline:ENSMUSG00000053291 Uniprot:Q91ZR1
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>RGD|620931 [details] [associations]
symbol:Rab4b "RAB4B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>UNIPROTKB|P51146 [details] [associations]
symbol:Rab4b "Ras-related protein Rab-4B" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620931 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101805 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
OMA:SPNIVIL EMBL:X78605 IPI:IPI00199224 PIR:S58279
RefSeq:NP_059051.1 UniGene:Rn.7181 ProteinModelPortal:P51146
SMR:P51146 STRING:P51146 PRIDE:P51146 Ensembl:ENSRNOT00000002052
GeneID:50866 KEGG:rno:50866 UCSC:RGD:620931 InParanoid:P51146
NextBio:610586 ArrayExpress:P51146 Genevestigator:P51146
GermOnline:ENSRNOG00000001500 Uniprot:P51146
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/183 (35%), Positives = 104/183 (56%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRA 235
A P + +L GN+ L R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
Query: 236 LQR 238
L +
Sbjct: 170 LNK 172
>ZFIN|ZDB-GENE-040822-15 [details] [associations]
symbol:rab4b "RAB4B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040822-15 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4WM4VM CTD:53916 KO:K07880
EMBL:BC080219 IPI:IPI00495099 RefSeq:NP_001004002.1
UniGene:Dr.85594 ProteinModelPortal:Q68EK7 SMR:Q68EK7 PRIDE:Q68EK7
GeneID:445498 KEGG:dre:445498 InParanoid:Q68EK7 NextBio:20832167
Uniprot:Q68EK7
Length = 213
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/178 (35%), Positives = 103/178 (57%)
Query: 57 YDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTT 116
YD+L KFL++G + GK +L ++E++F + +S G + + +
Sbjct: 5 YDFLFKFLVIGSAGTGKSCLLHQ-FIENKFKQ-------DSNHTIG-------VEFGSRV 49
Query: 117 ILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEH 176
+ + GK VKLQ+WDT+GQ RF ++ RSY RGA G LLVYDIT++ +++ + WL +
Sbjct: 50 VNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTL 109
Query: 177 A-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSR 233
A P + +L GN+ L +R VT EA +A +N++ F E S L N+ E+F + +R
Sbjct: 110 ASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAR 167
>DICTYBASE|DDB_G0273935 [details] [associations]
symbol:rabF1-2 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
GenBank:AAFI02000011 Ncbi:EAL70401
Length = 194
Score = 224 (83.9 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 42/130 (32%), Positives = 78/130 (60%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K T+ ++GK +KLQ+WDT+G+ RF + S+ RG G+++VYD+T++ SF+ + W
Sbjct: 42 IEFKIKTVYIEGKPIKLQIWDTAGEKRF-RVHNSHYRGCHGVIIVYDVTDQRSFENVPSW 100
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
++++ +A V K+++GN+ L + V A+ +A + F E+S NI E+F
Sbjct: 101 IEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAF 160
Query: 229 TELSRRALQR 238
L + + R
Sbjct: 161 ISLVKLCINR 170
Score = 75 (31.5 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K+Y++L KF+L GDS VGK IL
Sbjct: 3 KEYEHLFKFVLAGDSGVGKTSIL 25
>DICTYBASE|DDB_G0272905 [details] [associations]
symbol:rabF1-1 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0273935
dictyBase:DDB_G0272905 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 HSSP:P55258 ProtClustDB:CLSZ2431057 RefSeq:XP_644326.1
RefSeq:XP_645088.1 ProteinModelPortal:Q558I0
EnsemblProtists:DDB0229419 GeneID:8618762 GeneID:8619214
KEGG:ddi:DDB_G0272905 KEGG:ddi:DDB_G0273935 Uniprot:Q558I0
Length = 190
Score = 224 (83.9 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 42/130 (32%), Positives = 78/130 (60%)
Query: 110 LAYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRW 169
+ +K T+ ++GK +KLQ+WDT+G+ RF + S+ RG G+++VYD+T++ SF+ + W
Sbjct: 42 IEFKIKTVYIEGKPIKLQIWDTAGEKRF-RVHNSHYRGCHGVIIVYDVTDQRSFENVPSW 100
Query: 170 LKEVEEHA-PGVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESF 228
++++ +A V K+++GN+ L + V A+ +A + F E+S NI E+F
Sbjct: 101 IEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAF 160
Query: 229 TELSRRALQR 238
L + + R
Sbjct: 161 ISLVKLCINR 170
Score = 75 (31.5 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 11 KQYDYLLKFLLVGDSDVGKQEIL 33
K+Y++L KF+L GDS VGK IL
Sbjct: 3 KEYEHLFKFVLAGDSGVGKTSIL 25
>UNIPROTKB|O88565 [details] [associations]
symbol:Rab5a "Protein Rab5a" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620936 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
HSSP:P20339 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M OMA:EPQNTGA
EMBL:CH474184 EMBL:AF072935 EMBL:BC161848 IPI:IPI00210733
RefSeq:NP_073183.1 UniGene:Rn.44477 SMR:O88565 IntAct:O88565
MINT:MINT-4584734 STRING:O88565 Ensembl:ENSRNOT00000016813
GeneID:64633 KEGG:rno:64633 InParanoid:O88565 NextBio:613600
Genevestigator:O88565 Uniprot:O88565
Length = 215
Score = 255 (94.8 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 65/192 (33%), Positives = 103/192 (53%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +F F ES G+ A+ T T+ LD
Sbjct: 22 KLVLLGESAVGKSSLVLR-FVKGQFHEF-----QESTI--GA-------AFLTQTVCLDD 66
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN+ SF W+KE++ A P +
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V +EA+ YA N + F E S N+ E F ++++ L +N
Sbjct: 127 VIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK-LPKNE 185
Query: 241 MERLWRSNKVGR 252
+ ++ GR
Sbjct: 186 PQNPGANSARGR 197
Score = 39 (18.8 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 22 KLVLLGESAVGKSSLV 37
>UNIPROTKB|F1Q0Y2 [details] [associations]
symbol:RAB15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 OMA:HNITETF EMBL:AAEX03005788
Ensembl:ENSCAFT00000025662 Uniprot:F1Q0Y2
Length = 168
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/132 (42%), Positives = 85/132 (64%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+
Sbjct: 1 FKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVS 60
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+V+E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT
Sbjct: 61 DVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTR 120
Query: 231 LSRRALQRNGME 242
L+ LQ + E
Sbjct: 121 LTELVLQAHRKE 132
>UNIPROTKB|B4DT13 [details] [associations]
symbol:RAB11A "cDNA FLJ51542, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC084854 EMBL:AC011939 CTD:8766 KO:K07904
RefSeq:NP_001193765.1 UniGene:Hs.321541 DNASU:8766 GeneID:8766
KEGG:hsa:8766 HGNC:HGNC:9760 GenomeRNAi:8766 NextBio:32876
IPI:IPI01022454 EMBL:AK300008 SMR:B4DT13 STRING:B4DT13
Ensembl:ENST00000569896 UCSC:uc010ujk.2 Uniprot:B4DT13
Length = 155
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 65/156 (41%), Positives = 92/156 (58%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTT 115
+YDYL K +L+GDS VGK +LS RF R + S+S G + + T
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLS------RFTRNEFNLESKSTI--G-------VEFATR 51
Query: 116 TILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEE 175
+I +DGK +K Q+WDT+GQ R+ I +Y RGA G LLVYDI +++ ++RWLKE+ +
Sbjct: 52 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD 111
Query: 176 HAPG-VPKVLVGNRLHLAFNRTVTTREAEMYAIKNQ 210
HA + +LVGN+ L R V T EA +A KN+
Sbjct: 112 HADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNE 147
>UNIPROTKB|F1SA57 [details] [associations]
symbol:RAB12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:HNITETF
EMBL:FP236589 Ensembl:ENSSSCT00000002538 Uniprot:F1SA57
Length = 171
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/132 (42%), Positives = 85/132 (64%)
Query: 112 YKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLK 171
+K TI +DG +V++Q+WDT+GQ R+ TI + Y R AQGI LVYDI+++ S+ I +W+
Sbjct: 4 FKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVS 63
Query: 172 EVEEHAP-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTE 230
+V+E+AP GV K+L+GN+ R V + + A + M F+E S + NI+ESFT
Sbjct: 64 DVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTR 123
Query: 231 LSRRALQRNGME 242
L+ LQ + E
Sbjct: 124 LTELVLQAHRKE 135
>ZFIN|ZDB-GENE-061215-104 [details] [associations]
symbol:rab39b "RAB39B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-061215-104 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J CTD:116442
EMBL:AL954129 EMBL:BC128658 IPI:IPI00503702 RefSeq:NP_001073492.1
UniGene:Dr.108453 Ensembl:ENSDART00000101406 GeneID:566010
KEGG:dre:566010 InParanoid:A1A5H9 OMA:NDESECL NextBio:20887972
Uniprot:A1A5H9
Length = 213
Score = 251 (93.4 bits), Expect = 5.4e-24, Sum P(2) = 5.4e-24
Identities = 72/218 (33%), Positives = 112/218 (51%)
Query: 59 YLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTIL 118
Y + +++GDS VGK ++ + E RF + P G + ++ +
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRR-FTEGRFAQV------SDPTV-GVDFFSRLVEIEP---- 54
Query: 119 LDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA- 177
GKR+KLQ+WDT+GQ RF +I R+Y R + G LL++DITN+ SF + WL+E H
Sbjct: 55 --GKRIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQ 112
Query: 178 P-GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRAL 236
P + +LVG++ L R V+ +EAE A M + E S N+ +FTEL+R
Sbjct: 113 PHSIVFLLVGHKCDLEPQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIF 172
Query: 237 Q--RNG---MERLWRSNKVGRKPLI--NFESFTELSRR 267
+ +NG ++ W K G P + + E T+ RR
Sbjct: 173 ELVKNGEISIQEGWEGVKSGFVPNVVHSSEEVTKGDRR 210
Score = 43 (20.2 bits), Expect = 5.4e-24, Sum P(2) = 5.4e-24
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 15 YLLKFLLVGDSDVGK 29
Y + +++GDS VGK
Sbjct: 7 YQFRLIVIGDSTVGK 21
>UNIPROTKB|F1NST3 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN
IPI:IPI00600808 EMBL:AADN02068703 EMBL:AADN02068704
Ensembl:ENSGALT00000005312 Ensembl:ENSGALT00000039914
Uniprot:F1NST3
Length = 216
Score = 255 (94.8 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 66/206 (32%), Positives = 109/206 (52%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +FP F ES G+ A+ T T+ LD
Sbjct: 23 KLVLLGESAVGKTSLVLR-FVKGQFPEF-----QESTI--GA-------AFLTQTVCLDD 67
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN +F W+KE++ A P +
Sbjct: 68 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNI 127
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V ++A+ YA N + F E S N+ E F ++++ L +N
Sbjct: 128 VIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKK-LPKNE 186
Query: 241 MERLWRSNKVGRKPLINFESFTELSR 266
+ GR +++ + ++ SR
Sbjct: 187 PQNA--PGGPGRNRVVDLQESSQPSR 210
Score = 38 (18.4 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 23 KLVLLGESAVGKTSLV 38
>RGD|2319287 [details] [associations]
symbol:LOC100361891 "RAB5A, member RAS oncogene family-like"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0019001 "guanyl nucleotide binding"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=ISO] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] [GO:0051489 "regulation of filopodium assembly"
evidence=ISO] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=ISO]
REFSEQ:XM_003751377 Ncbi:XP_003751425
Length = 215
Score = 254 (94.5 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 65/192 (33%), Positives = 103/192 (53%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +F F ES G+ A+ T T+ LD
Sbjct: 22 KLVLLGESAVGKSSLVLR-FVKGQFHEF-----QESTI--GA-------AFLTQTVCLDD 66
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN+ SF W+KE++ A P +
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNI 126
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V +EA+ YA N + F E S N+ E F ++++ L +N
Sbjct: 127 VIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKK-LPKNE 185
Query: 241 MERLWRSNKVGR 252
+ ++ GR
Sbjct: 186 PQNPGANSARGR 197
Score = 39 (18.8 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 22 KLVLLGESAVGKSSLV 37
>DICTYBASE|DDB_G0287211 [details] [associations]
symbol:rab11B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;ISS] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0287211 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR PROSITE:PS51419 eggNOG:COG1100
EMBL:AAFI02000099 KO:K07976 HSSP:Q15907 OMA:ISRRSTF EMBL:AF037357
RefSeq:XP_637328.1 ProteinModelPortal:Q54KM9 SMR:Q54KM9
PRIDE:Q54KM9 EnsemblProtists:DDB0191421 GeneID:8626026
KEGG:ddi:DDB_G0287211 Uniprot:Q54KM9
Length = 220
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 67/180 (37%), Positives = 104/180 (57%)
Query: 56 QYDYLLKFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDM-LAYKT 114
+YDYL K +++GDS VGK +LS Y ++ F GK + + + T
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSR-YNKNEF---------------SVGKLSTIGVEFST 50
Query: 115 TTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVE 174
T+ +D K +KLQLWDT+GQ ++ +I SY +GA G L+VY+I ++ SF+ +++WLK+
Sbjct: 51 KTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFR 110
Query: 175 EHAP---GVPKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTEL 231
E+A G+ +LVGN+ L R V+T E + +A K+ M F E S L N+ +F L
Sbjct: 111 ENAHQDYGI--MLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNL 168
>UNIPROTKB|Q0IIG7 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122651
IPI:IPI00693824 RefSeq:NP_001069654.1 UniGene:Bt.24043
ProteinModelPortal:Q0IIG7 SMR:Q0IIG7 STRING:Q0IIG7 PRIDE:Q0IIG7
GeneID:539764 KEGG:bta:539764 CTD:5868 InParanoid:Q0IIG7 KO:K07887
OrthoDB:EOG4Z0B6M NextBio:20878203 Uniprot:Q0IIG7
Length = 215
Score = 253 (94.1 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 65/192 (33%), Positives = 103/192 (53%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +F F ES G+ A+ T T+ LD
Sbjct: 22 KLVLLGESAVGKSSLVLR-FVKGQFHEF-----QESTI--GA-------AFLTQTVCLDD 66
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN+ SF W+KE++ A P +
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V +EA+ YA N + F E S N+ E F ++++ L +N
Sbjct: 127 VIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK-LPKNE 185
Query: 241 MERLWRSNKVGR 252
+ ++ GR
Sbjct: 186 PQNPGANSTRGR 197
Score = 39 (18.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 22 KLVLLGESAVGKSSLV 37
>UNIPROTKB|P18066 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0005811 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5868
KO:K07887 OrthoDB:EOG4Z0B6M EMBL:M35520 PIR:A30413
RefSeq:NP_001003317.1 UniGene:Cfa.40292 ProteinModelPortal:P18066
IntAct:P18066 STRING:P18066 PRIDE:P18066 Ensembl:ENSCAFT00000009363
GeneID:404008 KEGG:cfa:404008 InParanoid:P18066 OMA:EPQNTGA
NextBio:20817495 Uniprot:P18066
Length = 215
Score = 253 (94.1 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 65/192 (33%), Positives = 103/192 (53%)
Query: 62 KFLLVGDSDVGKQEILSGLYLESRFPRFWLDGSSESPFCSGSGKYDDMLAYKTTTILLDG 121
K +L+G+S VGK ++ +++ +F F ES G+ A+ T T+ LD
Sbjct: 22 KLVLLGESAVGKSSLVLR-FVKGQFHEF-----QESTI--GA-------AFLTQTVCLDD 66
Query: 122 KRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHA-PGV 180
VK ++WDT+GQ R+ ++ Y RGAQ ++VYDITN+ SF W+KE++ A P +
Sbjct: 67 TTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNI 126
Query: 181 PKVLVGNRLHLAFNRTVTTREAEMYAIKNQMAFFEVSPLCDFNIRESFTELSRRALQRNG 240
L GN+ LA R V +EA+ YA N + F E S N+ E F ++++ L +N
Sbjct: 127 VIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK-LPKNE 185
Query: 241 MERLWRSNKVGR 252
+ ++ GR
Sbjct: 186 PQNPGANSARGR 197
Score = 39 (18.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 18 KFLLVGDSDVGKQEIL 33
K +L+G+S VGK ++
Sbjct: 22 KLVLLGESAVGKSSLV 37
WARNING: HSPs involving 1274 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 432 398 0.00097 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1524
No. of states in DFA: 617 (66 KB)
Total size of DFA: 259 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 31.19u 0.12s 31.31t Elapsed: 00:00:03
Total cpu time: 31.25u 0.12s 31.37t Elapsed: 00:00:04
Start: Thu Aug 15 11:18:38 2013 End: Thu Aug 15 11:18:42 2013
WARNINGS ISSUED: 2