Query psy3452
Match_columns 116
No_of_seqs 141 out of 1814
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 17:03:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 99.9 7.2E-26 2.5E-30 149.7 11.2 113 1-116 33-224 (241)
2 2av4_A Thioredoxin-like protei 99.9 1.7E-22 5.9E-27 126.0 8.1 64 1-66 42-105 (160)
3 1a8l_A Protein disulfide oxido 99.9 4.8E-22 1.6E-26 130.5 9.2 109 2-115 24-212 (226)
4 3q6o_A Sulfhydryl oxidase 1; p 99.9 2.5E-21 8.6E-26 128.8 11.8 65 1-65 31-98 (244)
5 3zzx_A Thioredoxin; oxidoreduc 99.9 7.3E-22 2.5E-26 116.5 7.3 63 1-66 21-83 (105)
6 3h79_A Thioredoxin-like protei 99.9 2.4E-21 8.3E-26 117.1 9.8 82 1-116 34-115 (127)
7 3apo_A DNAJ homolog subfamily 99.9 8.9E-21 3.1E-25 143.1 12.5 110 2-113 457-639 (780)
8 2ywm_A Glutaredoxin-like prote 99.8 1.7E-20 5.9E-25 123.4 10.0 103 8-115 33-206 (229)
9 3t58_A Sulfhydryl oxidase 1; o 99.8 3.7E-20 1.3E-24 134.8 11.6 65 1-65 31-98 (519)
10 2qsi_A Putative hydrogenase ex 99.8 5.5E-21 1.9E-25 117.1 4.5 63 2-66 35-99 (137)
11 2r2j_A Thioredoxin domain-cont 99.8 1.6E-19 5.3E-24 127.1 11.4 65 2-66 24-92 (382)
12 1sji_A Calsequestrin 2, calseq 99.8 1E-19 3.6E-24 126.6 9.5 106 2-114 30-209 (350)
13 3us3_A Calsequestrin-1; calciu 99.8 1.8E-19 6.1E-24 126.3 10.2 107 2-114 32-211 (367)
14 1qgv_A Spliceosomal protein U5 99.8 1.7E-19 5.9E-24 111.4 8.3 64 1-66 24-87 (142)
15 2dj3_A Protein disulfide-isome 99.8 3.4E-19 1.2E-23 108.1 8.8 65 1-65 26-90 (133)
16 3ed3_A Protein disulfide-isome 99.8 4.5E-19 1.5E-23 121.4 10.4 63 2-66 37-101 (298)
17 3gix_A Thioredoxin-like protei 99.8 1.6E-19 5.5E-24 112.3 6.9 64 1-66 24-87 (149)
18 4euy_A Uncharacterized protein 99.8 2.5E-19 8.4E-24 104.9 6.7 63 1-66 19-81 (105)
19 2qgv_A Hydrogenase-1 operon pr 99.8 1.4E-20 4.6E-25 115.8 1.2 63 2-66 36-101 (140)
20 3apo_A DNAJ homolog subfamily 99.8 8.7E-19 3E-23 132.3 11.2 103 2-106 565-742 (780)
21 1mek_A Protein disulfide isome 99.8 4.6E-19 1.6E-23 105.2 7.7 79 1-115 25-103 (120)
22 3ul3_B Thioredoxin, thioredoxi 99.8 5.2E-19 1.8E-23 107.0 7.0 63 1-65 43-105 (128)
23 3uvt_A Thioredoxin domain-cont 99.8 8.5E-19 2.9E-23 103.0 7.7 62 2-63 23-85 (111)
24 3f8u_A Protein disulfide-isome 99.8 1.1E-18 3.6E-23 125.6 9.6 63 2-66 23-85 (481)
25 3ga4_A Dolichyl-diphosphooligo 99.8 6.6E-19 2.3E-23 112.4 7.3 66 2-67 39-114 (178)
26 3qfa_C Thioredoxin; protein-pr 99.8 5.4E-19 1.8E-23 105.4 6.5 63 1-66 32-94 (116)
27 3evi_A Phosducin-like protein 99.8 8.6E-19 2.9E-23 105.3 7.1 59 2-66 25-83 (118)
28 3gnj_A Thioredoxin domain prot 99.8 9.3E-19 3.2E-23 102.9 6.9 64 1-66 23-86 (111)
29 2dj1_A Protein disulfide-isome 99.8 1.7E-18 5.7E-23 105.9 8.2 65 1-65 35-100 (140)
30 3f3q_A Thioredoxin-1; His TAG, 99.8 9.2E-19 3.2E-23 103.3 6.7 63 1-66 25-87 (109)
31 3uem_A Protein disulfide-isome 99.8 4.2E-18 1.4E-22 118.6 11.0 111 2-116 137-344 (361)
32 3die_A Thioredoxin, TRX; elect 99.8 1.6E-18 5.5E-23 101.0 7.1 64 1-66 20-83 (106)
33 1gh2_A Thioredoxin-like protei 99.8 1.3E-18 4.3E-23 102.0 6.6 63 1-66 22-84 (107)
34 2voc_A Thioredoxin; electron t 99.8 2E-18 6.7E-23 102.2 7.3 64 1-66 18-81 (112)
35 3aps_A DNAJ homolog subfamily 99.8 1.8E-18 6.1E-23 103.5 7.2 63 2-66 23-85 (122)
36 1x5e_A Thioredoxin domain cont 99.8 3.7E-18 1.3E-22 102.8 8.6 64 2-66 24-87 (126)
37 2trx_A Thioredoxin; electron t 99.8 2.9E-18 1E-22 100.4 7.8 63 1-65 21-83 (108)
38 1fo5_A Thioredoxin; disulfide 99.8 2.6E-18 9E-23 96.6 7.2 60 1-62 3-62 (85)
39 2o8v_B Thioredoxin 1; disulfid 99.8 4.1E-18 1.4E-22 103.3 8.2 64 1-66 41-104 (128)
40 3hxs_A Thioredoxin, TRXP; elec 99.8 2.1E-18 7.3E-23 105.6 7.0 62 1-64 52-113 (141)
41 2dml_A Protein disulfide-isome 99.8 1.5E-18 5.2E-23 104.8 6.1 61 1-63 36-96 (130)
42 1x5d_A Protein disulfide-isome 99.8 2.1E-18 7.1E-23 104.4 6.7 66 1-66 26-93 (133)
43 2ppt_A Thioredoxin-2; thiredox 99.8 2.5E-18 8.7E-23 107.5 7.2 64 1-66 65-128 (155)
44 3tco_A Thioredoxin (TRXA-1); d 99.8 3.3E-18 1.1E-22 100.1 7.2 64 1-66 22-85 (109)
45 2dj0_A Thioredoxin-related tra 99.7 1.6E-18 5.6E-23 105.9 6.1 53 2-55 28-80 (137)
46 1t00_A Thioredoxin, TRX; redox 99.7 3.3E-18 1.1E-22 100.8 7.0 64 1-66 24-87 (112)
47 3qou_A Protein YBBN; thioredox 99.7 1.4E-18 4.8E-23 117.6 6.1 64 1-66 27-90 (287)
48 1nsw_A Thioredoxin, TRX; therm 99.7 3.3E-18 1.1E-22 99.7 6.9 63 2-66 19-81 (105)
49 3hz4_A Thioredoxin; NYSGXRC, P 99.7 2.2E-18 7.5E-23 105.8 6.3 63 2-66 26-88 (140)
50 2hls_A Protein disulfide oxido 99.7 1.3E-17 4.3E-22 111.2 10.4 108 2-115 27-212 (243)
51 2djj_A PDI, protein disulfide- 99.7 1.2E-17 4E-22 99.7 9.2 75 1-115 26-103 (121)
52 1nho_A Probable thioredoxin; b 99.7 1.9E-18 6.5E-23 97.2 5.2 60 1-62 2-61 (85)
53 3qcp_A QSOX from trypanosoma b 99.7 7.3E-18 2.5E-22 121.1 9.4 84 2-116 44-127 (470)
54 1dby_A Chloroplast thioredoxin 99.7 4.2E-18 1.4E-22 99.5 6.8 64 1-66 20-83 (107)
55 1ep7_A Thioredoxin CH1, H-type 99.7 3.4E-18 1.2E-22 100.7 6.4 64 1-66 25-88 (112)
56 3p2a_A Thioredoxin 2, putative 99.7 3.9E-18 1.3E-22 105.4 6.9 64 1-66 56-119 (148)
57 2b5e_A Protein disulfide-isome 99.7 8.3E-18 2.8E-22 121.7 9.3 76 2-115 33-108 (504)
58 2i4a_A Thioredoxin; acidophIle 99.7 8.8E-18 3E-22 98.0 7.6 63 1-65 21-83 (107)
59 2l5l_A Thioredoxin; structural 99.7 6.5E-18 2.2E-22 103.2 7.4 60 2-63 40-99 (136)
60 3m9j_A Thioredoxin; oxidoreduc 99.7 5.9E-18 2E-22 98.5 6.8 63 1-66 21-83 (105)
61 3d6i_A Monothiol glutaredoxin- 99.7 3.9E-18 1.3E-22 100.6 5.9 65 1-66 22-86 (112)
62 1r26_A Thioredoxin; redox-acti 99.7 5.8E-18 2E-22 102.3 6.7 63 1-66 38-100 (125)
63 2oe3_A Thioredoxin-3; electron 99.7 8E-18 2.7E-22 100.1 7.0 63 1-66 31-93 (114)
64 1w4v_A Thioredoxin, mitochondr 99.7 7.3E-18 2.5E-22 100.8 6.8 63 2-66 33-95 (119)
65 3dxb_A Thioredoxin N-terminall 99.7 9.6E-18 3.3E-22 110.2 7.9 64 1-66 31-94 (222)
66 2pu9_C TRX-F, thioredoxin F-ty 99.7 7.2E-18 2.5E-22 99.4 6.6 63 1-66 25-88 (111)
67 1xfl_A Thioredoxin H1; AT3G510 99.7 9.6E-18 3.3E-22 101.1 7.3 63 1-66 39-101 (124)
68 2f51_A Thioredoxin; electron t 99.7 8.2E-18 2.8E-22 100.6 6.8 61 2-65 25-85 (118)
69 1xwb_A Thioredoxin; dimerizati 99.7 1.2E-17 4.2E-22 97.2 7.4 64 1-66 21-84 (106)
70 1fb6_A Thioredoxin M; electron 99.7 1.2E-17 4E-22 97.1 7.0 64 1-66 19-82 (105)
71 2yzu_A Thioredoxin; redox prot 99.7 1.6E-17 5.3E-22 97.0 7.3 64 1-66 19-82 (109)
72 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.3E-17 4.4E-22 99.4 7.0 63 2-66 32-94 (121)
73 3f8u_A Protein disulfide-isome 99.7 2.6E-17 9E-22 118.4 9.8 78 1-116 371-448 (481)
74 2wz9_A Glutaredoxin-3; protein 99.7 9.9E-18 3.4E-22 104.3 6.7 63 1-66 33-95 (153)
75 1thx_A Thioredoxin, thioredoxi 99.7 1.3E-17 4.3E-22 98.4 6.6 63 2-66 27-89 (115)
76 2vlu_A Thioredoxin, thioredoxi 99.7 1.3E-17 4.6E-22 99.6 6.7 63 1-66 35-97 (122)
77 2fwh_A Thiol:disulfide interch 99.7 3E-17 1E-21 100.0 8.3 79 1-115 32-114 (134)
78 2l57_A Uncharacterized protein 99.7 1.4E-17 4.8E-22 100.2 6.4 62 1-64 27-90 (126)
79 1syr_A Thioredoxin; SGPP, stru 99.7 2.1E-17 7.2E-22 97.6 6.9 63 1-66 27-89 (112)
80 1zma_A Bacterocin transport ac 99.7 1.2E-17 4E-22 99.6 5.8 77 2-115 31-107 (118)
81 3d22_A TRXH4, thioredoxin H-ty 99.7 1.8E-17 6E-22 101.3 6.7 63 1-66 47-109 (139)
82 3apq_A DNAJ homolog subfamily 99.7 2.1E-17 7.3E-22 107.6 7.4 62 1-64 115-176 (210)
83 2l6c_A Thioredoxin; oxidoreduc 99.7 8.3E-18 2.8E-22 99.3 4.7 61 2-65 21-81 (110)
84 1faa_A Thioredoxin F; electron 99.7 1.7E-17 5.8E-22 99.5 6.1 62 1-65 38-100 (124)
85 2xc2_A Thioredoxinn; oxidoredu 99.7 1.7E-17 5.7E-22 98.7 5.9 62 1-66 34-95 (117)
86 2dbc_A PDCL2, unnamed protein 99.7 4.1E-17 1.4E-21 99.8 7.8 59 2-66 32-90 (135)
87 3fk8_A Disulphide isomerase; A 99.7 1.8E-17 6.3E-22 100.6 6.2 61 1-63 30-98 (133)
88 2vim_A Thioredoxin, TRX; thior 99.7 3.1E-17 1.1E-21 95.2 6.7 63 1-66 20-82 (104)
89 3emx_A Thioredoxin; structural 99.7 3.8E-18 1.3E-22 104.2 2.6 72 2-105 33-104 (135)
90 3cxg_A Putative thioredoxin; m 99.7 1.5E-17 5E-22 101.5 5.1 60 1-64 41-100 (133)
91 1z6n_A Hypothetical protein PA 99.7 1.5E-17 5.1E-22 105.4 5.2 62 2-66 56-120 (167)
92 2vm1_A Thioredoxin, thioredoxi 99.7 4.2E-17 1.4E-21 96.7 6.8 63 1-66 29-91 (118)
93 2e0q_A Thioredoxin; electron t 99.7 5.3E-17 1.8E-21 93.9 7.0 62 1-65 17-78 (104)
94 1v98_A Thioredoxin; oxidoreduc 99.7 5.9E-17 2E-21 99.2 7.1 62 3-66 53-114 (140)
95 3raz_A Thioredoxin-related pro 99.7 9.4E-17 3.2E-21 99.2 7.9 97 1-115 25-126 (151)
96 1oaz_A Thioredoxin 1; immune s 99.7 1.7E-17 5.9E-22 99.9 4.1 64 1-66 22-99 (123)
97 1ti3_A Thioredoxin H, PTTRXH1; 99.7 5.2E-17 1.8E-21 95.6 5.9 63 1-66 27-89 (113)
98 2j23_A Thioredoxin; immune pro 99.7 2.4E-17 8.3E-22 98.8 4.1 65 1-66 34-98 (121)
99 3eur_A Uncharacterized protein 99.7 1.5E-16 5.3E-21 97.3 7.8 88 1-106 32-126 (142)
100 1wou_A Thioredoxin -related pr 99.7 9.9E-17 3.4E-21 96.5 6.7 63 1-65 25-101 (123)
101 3f9u_A Putative exported cytoc 99.7 9.6E-17 3.3E-21 101.4 6.7 91 1-105 48-143 (172)
102 3s9f_A Tryparedoxin; thioredox 99.7 5.5E-17 1.9E-21 102.1 5.2 92 1-106 49-142 (165)
103 1zzo_A RV1677; thioredoxin fol 99.7 4.2E-16 1.4E-20 94.0 8.9 91 1-114 26-120 (136)
104 1i5g_A Tryparedoxin II; electr 99.7 7.5E-17 2.6E-21 98.9 5.2 88 1-105 29-121 (144)
105 1o8x_A Tryparedoxin, TRYX, TXN 99.7 8.6E-17 2.9E-21 98.9 5.2 88 1-105 29-121 (146)
106 1a0r_P Phosducin, MEKA, PP33; 99.7 1E-16 3.4E-21 107.0 5.4 61 2-66 135-195 (245)
107 2h30_A Thioredoxin, peptide me 99.7 6E-16 2.1E-20 96.4 8.6 86 1-105 39-133 (164)
108 3idv_A Protein disulfide-isome 99.7 1.6E-16 5.5E-21 104.7 6.2 65 2-66 149-214 (241)
109 2b5e_A Protein disulfide-isome 99.6 4.6E-16 1.6E-20 112.6 8.7 77 1-116 377-454 (504)
110 1a8l_A Protein disulfide oxido 99.6 2E-16 6.7E-21 103.6 5.9 64 3-66 137-202 (226)
111 1o73_A Tryparedoxin; electron 99.6 1.5E-16 5.1E-21 97.4 4.9 88 1-105 29-121 (144)
112 1lu4_A Soluble secreted antige 99.6 4.3E-16 1.5E-20 94.1 6.9 88 1-112 25-116 (136)
113 2lrt_A Uncharacterized protein 99.6 7.7E-16 2.6E-20 95.5 8.2 88 1-106 36-126 (152)
114 3uem_A Protein disulfide-isome 99.6 7E-16 2.4E-20 107.4 8.9 63 1-65 268-330 (361)
115 2trc_P Phosducin, MEKA, PP33; 99.6 1.7E-16 5.7E-21 104.3 4.9 61 2-66 122-182 (217)
116 3eyt_A Uncharacterized protein 99.6 1.3E-15 4.3E-20 94.5 8.5 88 1-106 29-130 (158)
117 3erw_A Sporulation thiol-disul 99.6 1.6E-15 5.4E-20 92.4 8.7 86 1-106 35-127 (145)
118 2lja_A Putative thiol-disulfid 99.6 7.4E-16 2.5E-20 95.0 7.2 87 1-106 31-121 (152)
119 3iv4_A Putative oxidoreductase 99.6 3E-16 1E-20 92.8 5.1 62 1-66 25-91 (112)
120 2lrn_A Thiol:disulfide interch 99.6 6.6E-16 2.3E-20 95.5 6.6 88 1-106 30-122 (152)
121 1ilo_A Conserved hypothetical 99.6 7.5E-16 2.6E-20 85.0 6.1 55 3-62 2-56 (77)
122 4evm_A Thioredoxin family prot 99.6 3.2E-15 1.1E-19 90.0 9.4 86 1-106 23-117 (138)
123 3hdc_A Thioredoxin family prot 99.6 3.7E-15 1.3E-19 92.7 9.8 86 1-106 42-128 (158)
124 3dml_A Putative uncharacterize 99.6 1.3E-16 4.3E-21 95.3 2.8 65 2-66 20-86 (116)
125 3kp8_A Vkorc1/thioredoxin doma 99.6 1.4E-16 4.7E-21 93.9 2.9 53 2-62 14-72 (106)
126 3hcz_A Possible thiol-disulfid 99.6 1.5E-15 5E-20 92.9 7.4 89 1-106 32-124 (148)
127 3lor_A Thiol-disulfide isomera 99.6 9.9E-16 3.4E-20 95.1 6.6 86 1-106 31-133 (160)
128 3fkf_A Thiol-disulfide oxidore 99.6 7.4E-16 2.5E-20 94.3 5.8 87 1-106 34-127 (148)
129 2yj7_A LPBCA thioredoxin; oxid 99.4 3.8E-17 1.3E-21 94.8 0.0 63 2-66 21-83 (106)
130 4fo5_A Thioredoxin-like protei 99.6 1.6E-15 5.5E-20 92.8 7.3 89 1-106 33-126 (143)
131 2b5x_A YKUV protein, TRXY; thi 99.6 5.5E-15 1.9E-19 90.2 9.5 84 1-105 30-122 (148)
132 3ewl_A Uncharacterized conserv 99.6 1.4E-15 4.9E-20 92.7 6.7 86 1-106 28-122 (142)
133 2fgx_A Putative thioredoxin; N 99.6 1E-15 3.5E-20 90.2 5.2 61 1-66 29-89 (107)
134 2es7_A Q8ZP25_salty, putative 99.6 2.2E-16 7.6E-21 97.5 2.5 62 2-66 36-101 (142)
135 2kuc_A Putative disulphide-iso 99.6 8.2E-16 2.8E-20 92.7 4.9 61 1-63 28-93 (130)
136 3ira_A Conserved protein; meth 99.6 8E-16 2.7E-20 97.8 4.6 62 1-64 40-112 (173)
137 2f9s_A Thiol-disulfide oxidore 99.6 1.5E-15 5E-20 93.7 5.7 85 1-105 27-115 (151)
138 2ju5_A Thioredoxin disulfide i 99.6 2.1E-15 7.2E-20 93.9 6.4 77 1-105 48-129 (154)
139 2lst_A Thioredoxin; structural 99.4 8.7E-17 3E-21 97.1 0.0 62 1-64 20-86 (130)
140 1sen_A Thioredoxin-like protei 99.6 5E-16 1.7E-20 97.8 3.3 52 1-54 47-99 (164)
141 1wmj_A Thioredoxin H-type; str 99.6 8.6E-17 2.9E-21 96.9 -0.3 61 2-65 38-98 (130)
142 1jfu_A Thiol:disulfide interch 99.6 1E-14 3.5E-19 92.8 9.3 87 1-106 61-156 (186)
143 3gl3_A Putative thiol:disulfid 99.6 6.4E-15 2.2E-19 90.7 7.7 85 1-105 29-117 (152)
144 2hls_A Protein disulfide oxido 99.6 4.9E-15 1.7E-19 98.7 7.6 64 2-66 140-205 (243)
145 2l5o_A Putative thioredoxin; s 99.6 3.2E-15 1.1E-19 92.1 6.2 93 1-114 29-126 (153)
146 1kng_A Thiol:disulfide interch 99.6 1.3E-15 4.5E-20 94.1 4.2 83 1-105 43-129 (156)
147 2c0g_A ERP29 homolog, windbeut 99.6 9.6E-15 3.3E-19 97.6 8.6 72 2-115 35-118 (248)
148 3kcm_A Thioredoxin family prot 99.6 1.9E-14 6.7E-19 88.7 9.5 86 1-106 29-119 (154)
149 3or5_A Thiol:disulfide interch 99.6 5.1E-15 1.8E-19 92.2 6.4 85 1-106 35-129 (165)
150 3ha9_A Uncharacterized thiored 99.6 6.8E-15 2.3E-19 91.9 6.8 84 1-106 38-143 (165)
151 3ph9_A Anterior gradient prote 99.6 7.9E-15 2.7E-19 91.4 7.0 25 1-25 45-69 (151)
152 2lus_A Thioredoxion; CR-Trp16, 99.3 2.3E-16 7.8E-21 96.3 0.0 93 2-106 28-121 (143)
153 2b1k_A Thiol:disulfide interch 99.6 2.2E-15 7.6E-20 94.4 4.4 83 1-106 52-138 (168)
154 3fw2_A Thiol-disulfide oxidore 99.6 1E-14 3.5E-19 89.9 7.2 87 1-106 34-129 (150)
155 3lwa_A Secreted thiol-disulfid 99.5 3.8E-14 1.3E-18 90.0 9.4 86 1-106 60-159 (183)
156 2djk_A PDI, protein disulfide- 99.5 9.4E-15 3.2E-19 89.0 6.2 61 2-65 25-87 (133)
157 3kh7_A Thiol:disulfide interch 99.5 4.6E-15 1.6E-19 94.1 4.9 83 1-106 59-145 (176)
158 2qc7_A ERP31, ERP28, endoplasm 99.5 2.9E-14 9.9E-19 94.9 8.7 78 2-115 24-105 (240)
159 3ia1_A THIO-disulfide isomeras 99.5 1.6E-14 5.5E-19 89.1 5.8 83 1-105 31-121 (154)
160 2ywm_A Glutaredoxin-like prote 99.5 1.8E-14 6.3E-19 94.5 6.4 59 3-65 139-197 (229)
161 3u5r_E Uncharacterized protein 99.5 1.1E-14 3.8E-19 95.3 4.3 85 2-106 61-156 (218)
162 2cvb_A Probable thiol-disulfid 99.5 3.2E-14 1.1E-18 90.7 6.0 85 1-106 34-129 (188)
163 2hyx_A Protein DIPZ; thioredox 99.5 6.1E-14 2.1E-18 97.9 7.8 86 1-106 83-177 (352)
164 2ywi_A Hypothetical conserved 99.5 2E-14 7E-19 92.0 4.7 85 2-106 48-143 (196)
165 3drn_A Peroxiredoxin, bacterio 99.5 5.9E-14 2E-18 87.7 6.5 85 2-106 31-123 (161)
166 1ttz_A Conserved hypothetical 99.5 2.8E-14 9.7E-19 81.2 3.4 53 4-65 3-55 (87)
167 2ls5_A Uncharacterized protein 99.2 4.7E-15 1.6E-19 92.2 0.0 91 1-106 34-127 (159)
168 2k8s_A Thioredoxin; dimer, str 99.5 5.1E-14 1.7E-18 78.6 4.0 61 4-67 4-65 (80)
169 2jsy_A Probable thiol peroxida 99.4 7.2E-13 2.5E-17 82.9 9.2 85 1-106 45-140 (167)
170 3cmi_A Peroxiredoxin HYR1; thi 99.4 5.6E-13 1.9E-17 83.9 6.9 41 1-43 33-73 (171)
171 2ggt_A SCO1 protein homolog, m 99.4 7.2E-13 2.5E-17 82.4 6.1 90 1-106 24-139 (164)
172 2rli_A SCO2 protein homolog, m 99.4 4.8E-13 1.6E-17 83.8 5.2 90 1-106 27-142 (171)
173 1zof_A Alkyl hydroperoxide-red 99.4 2.4E-13 8.4E-18 87.5 3.7 86 1-106 34-135 (198)
174 1we0_A Alkyl hydroperoxide red 99.4 5E-13 1.7E-17 85.3 4.7 90 1-106 32-131 (187)
175 2bmx_A Alkyl hydroperoxidase C 99.4 4.1E-13 1.4E-17 86.3 4.1 89 1-106 46-144 (195)
176 3kp9_A Vkorc1/thioredoxin doma 99.4 1.5E-13 5.2E-18 93.6 1.8 56 4-62 201-257 (291)
177 1xvw_A Hypothetical protein RV 99.4 4.7E-13 1.6E-17 83.1 3.9 87 2-106 38-134 (160)
178 3dwv_A Glutathione peroxidase- 99.4 8.7E-13 3E-17 84.3 5.2 42 1-43 47-88 (187)
179 2gs3_A PHGPX, GPX-4, phospholi 99.3 2.5E-12 8.6E-17 82.0 7.0 42 1-43 50-91 (185)
180 1qmv_A Human thioredoxin perox 99.3 1.4E-12 4.7E-17 83.9 5.6 89 1-106 35-137 (197)
181 2h01_A 2-Cys peroxiredoxin; th 99.3 1.1E-12 3.9E-17 84.0 5.1 89 1-106 32-133 (192)
182 2vup_A Glutathione peroxidase- 99.3 1.3E-12 4.4E-17 83.6 5.3 42 1-43 49-90 (190)
183 2f8a_A Glutathione peroxidase 99.3 4.5E-12 1.5E-16 82.5 7.7 42 1-43 48-89 (208)
184 3ztl_A Thioredoxin peroxidase; 99.3 1.5E-12 5.1E-17 85.5 5.4 87 1-106 70-172 (222)
185 2p31_A CL683, glutathione pero 99.3 3.4E-13 1.2E-17 85.7 2.2 43 1-44 50-92 (181)
186 2obi_A PHGPX, GPX-4, phospholi 99.3 4.2E-12 1.4E-16 80.7 7.1 42 1-43 48-89 (183)
187 2i81_A 2-Cys peroxiredoxin; st 99.3 2.3E-12 7.7E-17 84.2 5.9 89 1-106 53-154 (213)
188 1uul_A Tryparedoxin peroxidase 99.3 1.4E-12 4.9E-17 84.2 4.6 89 1-106 37-139 (202)
189 1xvq_A Thiol peroxidase; thior 99.3 5.8E-12 2E-16 79.7 7.1 85 1-107 45-142 (175)
190 1zye_A Thioredoxin-dependent p 99.3 2.7E-12 9.1E-17 84.2 5.7 89 1-106 57-159 (220)
191 1ego_A Glutaredoxin; electron 99.3 1.9E-12 6.5E-17 72.5 4.3 54 4-60 3-62 (85)
192 2v1m_A Glutathione peroxidase; 99.3 3.2E-12 1.1E-16 79.7 5.3 43 1-44 32-74 (169)
193 3gkn_A Bacterioferritin comigr 99.3 2.8E-12 9.6E-17 79.9 4.7 85 2-106 37-137 (163)
194 2c0d_A Thioredoxin peroxidase 99.3 3.6E-12 1.2E-16 83.8 4.6 89 1-106 57-158 (221)
195 2pn8_A Peroxiredoxin-4; thiore 99.3 6.2E-12 2.1E-16 82.0 5.6 87 1-106 49-151 (211)
196 2e7p_A Glutaredoxin; thioredox 99.3 2.6E-12 8.8E-17 75.9 3.5 51 3-60 22-77 (116)
197 1psq_A Probable thiol peroxida 99.3 1.9E-11 6.5E-16 76.3 7.1 85 1-106 43-138 (163)
198 1hyu_A AHPF, alkyl hydroperoxi 99.3 1.3E-11 4.4E-16 89.9 7.1 61 2-66 119-179 (521)
199 2p5q_A Glutathione peroxidase 99.2 4E-12 1.4E-16 79.4 3.9 42 1-43 33-74 (170)
200 1wjk_A C330018D20RIK protein; 99.2 3.1E-12 1.1E-16 74.4 2.9 54 1-61 16-71 (100)
201 2wfc_A Peroxiredoxin 5, PRDX5; 99.2 2.6E-11 8.9E-16 76.4 7.4 83 2-103 33-133 (167)
202 1q98_A Thiol peroxidase, TPX; 99.2 3.1E-11 1E-15 75.6 7.6 85 1-106 44-142 (165)
203 2k6v_A Putative cytochrome C o 99.2 2.8E-12 9.6E-17 80.2 2.6 45 1-45 36-83 (172)
204 2a4v_A Peroxiredoxin DOT5; yea 99.2 1.9E-11 6.5E-16 75.9 6.0 82 2-104 37-128 (159)
205 2yzh_A Probable thiol peroxida 99.2 5.7E-11 1.9E-15 74.7 8.2 84 1-106 48-145 (171)
206 2dlx_A UBX domain-containing p 99.2 1.5E-11 5E-16 76.7 5.2 63 1-65 43-110 (153)
207 1nm3_A Protein HI0572; hybrid, 99.2 4.6E-11 1.6E-15 79.0 7.8 84 1-103 34-134 (241)
208 2b7k_A SCO1 protein; metalloch 99.2 1.3E-11 4.4E-16 79.7 5.0 44 1-44 42-88 (200)
209 1n8j_A AHPC, alkyl hydroperoxi 99.2 1.6E-11 5.6E-16 78.4 5.4 89 1-106 31-130 (186)
210 3zrd_A Thiol peroxidase; oxido 99.2 3.9E-11 1.3E-15 77.6 7.2 87 1-108 79-179 (200)
211 3uma_A Hypothetical peroxiredo 99.2 3E-11 1E-15 77.3 6.2 83 2-103 59-158 (184)
212 1xzo_A BSSCO, hypothetical pro 99.2 4.4E-11 1.5E-15 74.9 6.8 44 1-44 34-79 (174)
213 1tp9_A Peroxiredoxin, PRX D (t 99.2 3.8E-11 1.3E-15 75.0 6.4 86 1-106 36-139 (162)
214 3p7x_A Probable thiol peroxida 99.2 2.1E-11 7.1E-16 76.4 5.1 86 1-108 47-143 (166)
215 3ixr_A Bacterioferritin comigr 99.2 3.1E-11 1.1E-15 76.6 5.5 85 2-106 53-153 (179)
216 3qpm_A Peroxiredoxin; oxidored 99.2 4E-11 1.4E-15 79.7 5.5 87 1-106 78-180 (240)
217 4g2e_A Peroxiredoxin; redox pr 99.2 3.3E-12 1.1E-16 79.7 0.2 86 1-106 31-131 (157)
218 2pwj_A Mitochondrial peroxired 99.1 3.2E-11 1.1E-15 76.2 4.3 83 2-103 46-145 (171)
219 3mng_A Peroxiredoxin-5, mitoch 99.1 1.2E-10 4E-15 73.9 6.2 84 3-106 47-149 (173)
220 3tjj_A Peroxiredoxin-4; thiore 99.1 1.2E-10 4E-15 78.0 4.2 87 1-106 92-194 (254)
221 3me7_A Putative uncharacterize 99.1 2.8E-10 9.5E-15 71.6 5.6 94 1-107 29-140 (170)
222 4gqc_A Thiol peroxidase, perox 99.0 6.1E-12 2.1E-16 79.0 -2.2 85 2-106 35-133 (164)
223 3kij_A Probable glutathione pe 99.0 2.7E-10 9.3E-15 72.1 5.4 43 1-44 39-81 (180)
224 2i3y_A Epididymal secretory gl 99.0 9.9E-10 3.4E-14 71.9 7.1 41 1-43 57-97 (215)
225 3a2v_A Probable peroxiredoxin; 99.0 3.9E-10 1.3E-14 75.3 5.2 85 3-106 37-136 (249)
226 1prx_A HORF6; peroxiredoxin, h 99.0 7.4E-10 2.5E-14 72.8 6.3 85 2-106 34-143 (224)
227 1h75_A Glutaredoxin-like prote 99.0 7.5E-10 2.6E-14 61.3 4.7 50 4-61 3-55 (81)
228 2v2g_A Peroxiredoxin 6; oxidor 99.0 7.4E-10 2.5E-14 73.3 4.9 85 2-106 31-139 (233)
229 3gyk_A 27KDA outer membrane pr 98.9 1.9E-09 6.4E-14 67.8 4.9 30 2-31 24-53 (175)
230 1xcc_A 1-Cys peroxiredoxin; un 98.9 1.1E-09 3.8E-14 71.8 3.8 85 2-106 34-140 (220)
231 1r7h_A NRDH-redoxin; thioredox 98.9 2.9E-09 9.8E-14 57.9 4.6 50 4-61 3-55 (75)
232 1eej_A Thiol:disulfide interch 98.9 8.7E-10 3E-14 72.0 2.5 26 2-27 88-113 (216)
233 1kte_A Thioltransferase; redox 98.9 2.4E-09 8.1E-14 62.1 4.0 52 4-60 14-72 (105)
234 2hze_A Glutaredoxin-1; thiored 98.8 2.4E-09 8E-14 63.3 3.1 54 3-61 20-80 (114)
235 4hde_A SCO1/SENC family lipopr 98.8 3.6E-08 1.2E-12 62.0 8.4 44 1-44 33-78 (170)
236 1un2_A DSBA, thiol-disulfide i 98.8 2E-09 6.9E-14 69.5 2.5 42 2-45 115-159 (197)
237 2r37_A Glutathione peroxidase 98.8 1.4E-08 4.7E-13 66.0 5.6 41 1-43 39-79 (207)
238 2klx_A Glutaredoxin; thioredox 98.7 4.9E-09 1.7E-13 59.1 2.4 52 1-60 5-59 (89)
239 3keb_A Probable thiol peroxida 98.7 2.3E-08 8E-13 65.8 5.3 81 2-106 50-149 (224)
240 2cq9_A GLRX2 protein, glutared 98.7 2E-08 6.9E-13 60.7 4.1 50 4-61 29-85 (130)
241 2ht9_A Glutaredoxin-2; thiored 98.7 2E-08 6.9E-13 61.9 4.1 50 4-61 51-107 (146)
242 3c1r_A Glutaredoxin-1; oxidize 98.6 1.2E-08 4.1E-13 60.7 2.7 52 4-60 27-86 (118)
243 1t3b_A Thiol:disulfide interch 98.6 2.5E-08 8.6E-13 64.9 4.4 26 2-27 88-113 (211)
244 3h93_A Thiol:disulfide interch 98.6 5.1E-08 1.7E-12 62.1 5.7 40 2-43 27-66 (192)
245 4f82_A Thioredoxin reductase; 98.6 1.2E-07 4.3E-12 60.1 6.9 83 2-103 50-149 (176)
246 2khp_A Glutaredoxin; thioredox 98.6 4.5E-08 1.5E-12 55.3 3.8 52 1-60 5-60 (92)
247 3qmx_A Glutaredoxin A, glutare 98.6 7.2E-08 2.5E-12 55.7 4.6 49 4-60 18-71 (99)
248 3hd5_A Thiol:disulfide interch 98.5 2.4E-07 8.1E-12 59.1 6.2 41 2-44 27-67 (195)
249 3ic4_A Glutaredoxin (GRX-1); s 98.5 3.5E-08 1.2E-12 55.7 1.8 25 1-25 11-35 (92)
250 1fov_A Glutaredoxin 3, GRX3; a 98.5 2.3E-07 8E-12 51.0 4.7 50 4-61 3-56 (82)
251 1v58_A Thiol:disulfide interch 98.4 3.7E-07 1.3E-11 60.4 5.5 37 2-42 99-135 (241)
252 3rhb_A ATGRXC5, glutaredoxin-C 98.4 1.5E-07 5.2E-12 55.2 3.2 49 4-60 21-77 (113)
253 2qgv_A Hydrogenase-1 operon pr 98.4 5.3E-08 1.8E-12 59.7 1.0 37 70-106 67-104 (140)
254 2yan_A Glutaredoxin-3; oxidore 98.4 2.1E-07 7.3E-12 54.0 3.6 48 5-60 20-76 (105)
255 3hz8_A Thiol:disulfide interch 98.4 6.7E-07 2.3E-11 57.3 6.2 42 2-45 26-67 (193)
256 3sbc_A Peroxiredoxin TSA1; alp 98.4 1E-06 3.5E-11 57.6 7.1 89 1-106 53-155 (216)
257 3nzn_A Glutaredoxin; structura 98.4 5.2E-07 1.8E-11 52.1 4.9 22 4-25 24-45 (103)
258 2lqo_A Putative glutaredoxin R 98.4 3E-07 1E-11 52.4 3.5 54 4-65 6-64 (92)
259 3zzx_A Thioredoxin; oxidoreduc 98.4 1.9E-07 6.4E-12 54.4 2.7 37 70-106 50-86 (105)
260 2qsi_A Putative hydrogenase ex 98.4 1.8E-07 6.3E-12 57.0 2.7 37 70-106 66-102 (137)
261 3msz_A Glutaredoxin 1; alpha-b 98.3 4E-07 1.4E-11 50.7 2.5 52 4-61 6-66 (89)
262 4f9z_D Endoplasmic reticulum r 98.3 2.9E-06 1E-10 55.5 6.8 60 3-64 134-197 (227)
263 4f9z_D Endoplasmic reticulum r 98.3 5.4E-06 1.8E-10 54.2 8.1 92 2-103 29-199 (227)
264 3us3_A Calsequestrin-1; calciu 98.2 1.1E-06 3.6E-11 61.5 3.8 43 71-116 69-111 (367)
265 3l9v_A Putative thiol-disulfid 98.2 8.1E-07 2.8E-11 56.7 2.8 41 2-44 16-59 (189)
266 3ctg_A Glutaredoxin-2; reduced 98.2 4.8E-07 1.7E-11 54.6 1.6 52 4-60 39-98 (129)
267 3h8q_A Thioredoxin reductase 3 98.2 2.3E-06 7.8E-11 50.4 4.4 51 4-62 19-76 (114)
268 2es7_A Q8ZP25_salty, putative 98.1 7.7E-07 2.6E-11 54.5 2.0 43 70-114 66-110 (142)
269 3ga4_A Dolichyl-diphosphooligo 98.1 2.5E-06 8.7E-11 54.2 4.4 37 70-106 80-116 (178)
270 4euy_A Uncharacterized protein 98.1 2.1E-06 7.2E-11 49.2 2.6 37 70-106 48-84 (105)
271 1oaz_A Thioredoxin 1; immune s 98.1 3.6E-06 1.2E-10 49.9 3.7 42 71-114 67-108 (123)
272 4eo3_A Bacterioferritin comigr 98.1 4.6E-06 1.6E-10 57.5 4.7 82 1-106 25-114 (322)
273 4dvc_A Thiol:disulfide interch 98.0 1.1E-05 3.6E-10 50.6 5.9 41 2-42 23-63 (184)
274 3h79_A Thioredoxin-like protei 98.0 3.3E-06 1.1E-10 50.1 3.3 59 8-66 44-102 (127)
275 1x5d_A Protein disulfide-isome 98.0 4E-06 1.4E-10 49.8 3.7 43 71-115 61-103 (133)
276 3gnj_A Thioredoxin domain prot 98.0 3.2E-06 1.1E-10 48.6 2.9 42 71-114 54-95 (111)
277 1sji_A Calsequestrin 2, calseq 98.0 3.4E-06 1.1E-10 58.4 3.3 43 71-116 67-109 (350)
278 3ul3_B Thioredoxin, thioredoxi 98.0 5.1E-06 1.8E-10 49.3 3.7 43 70-114 73-115 (128)
279 2voc_A Thioredoxin; electron t 98.0 5E-06 1.7E-10 48.2 3.3 42 71-114 49-90 (112)
280 3p2a_A Thioredoxin 2, putative 98.0 5.4E-06 1.9E-10 50.4 3.5 44 70-115 86-129 (148)
281 2dml_A Protein disulfide-isome 98.0 9.5E-06 3.3E-10 48.0 4.5 44 71-115 67-110 (130)
282 3die_A Thioredoxin, TRX; elect 98.0 4.7E-06 1.6E-10 47.4 2.9 42 71-114 51-92 (106)
283 2i4a_A Thioredoxin; acidophIle 98.0 6.6E-06 2.2E-10 46.9 3.6 42 71-114 52-93 (107)
284 2trx_A Thioredoxin; electron t 98.0 6.6E-06 2.3E-10 47.1 3.6 36 71-106 52-87 (108)
285 2r2j_A Thioredoxin domain-cont 97.9 5.5E-06 1.9E-10 58.1 3.3 45 71-116 60-104 (382)
286 3tco_A Thioredoxin (TRXA-1); d 97.9 6.2E-06 2.1E-10 47.1 3.0 42 71-114 53-94 (109)
287 2ppt_A Thioredoxin-2; thiredox 97.9 6.9E-06 2.4E-10 50.7 3.3 43 70-114 95-137 (155)
288 2av4_A Thioredoxin-like protei 97.9 8.2E-06 2.8E-10 50.8 3.4 37 70-106 72-108 (160)
289 3hxs_A Thioredoxin, TRXP; elec 97.9 1E-05 3.6E-10 48.6 3.8 44 70-115 82-125 (141)
290 3qfa_C Thioredoxin; protein-pr 97.9 8.8E-06 3E-10 47.6 3.3 36 71-106 62-97 (116)
291 1hyu_A AHPF, alkyl hydroperoxi 97.9 9.9E-05 3.4E-09 53.7 9.5 89 2-105 20-180 (521)
292 1wik_A Thioredoxin-like protei 97.9 1E-05 3.4E-10 47.2 3.5 49 4-60 17-74 (109)
293 2znm_A Thiol:disulfide interch 97.9 1.4E-05 4.8E-10 50.7 4.5 40 2-43 24-63 (195)
294 1nsw_A Thioredoxin, TRX; therm 97.9 8.5E-06 2.9E-10 46.4 3.0 36 71-106 49-84 (105)
295 3tue_A Tryparedoxin peroxidase 97.9 2.5E-05 8.4E-10 51.2 5.5 89 1-106 57-159 (219)
296 2i1u_A Thioredoxin, TRX, MPT46 97.9 8.7E-06 3E-10 47.5 3.0 42 71-114 62-103 (121)
297 1gh2_A Thioredoxin-like protei 97.9 7.1E-06 2.4E-10 47.0 2.6 36 71-106 52-87 (107)
298 2o8v_B Thioredoxin 1; disulfid 97.9 1.1E-05 3.6E-10 48.2 3.4 36 71-106 72-107 (128)
299 3apq_A DNAJ homolog subfamily 97.9 2E-05 6.7E-10 50.8 4.9 44 70-115 145-188 (210)
300 1dby_A Chloroplast thioredoxin 97.9 1E-05 3.4E-10 46.2 3.1 36 71-106 51-86 (107)
301 2l6c_A Thioredoxin; oxidoreduc 97.9 9.2E-06 3.1E-10 47.0 2.9 36 71-106 50-85 (110)
302 1t00_A Thioredoxin, TRX; redox 97.9 1E-05 3.4E-10 46.6 3.0 36 71-106 55-90 (112)
303 3m9j_A Thioredoxin; oxidoreduc 97.9 9.2E-06 3.2E-10 46.1 2.8 36 71-106 51-86 (105)
304 1w4v_A Thioredoxin, mitochondr 97.9 1E-05 3.6E-10 47.4 3.1 42 71-114 63-104 (119)
305 3hz4_A Thioredoxin; NYSGXRC, P 97.8 5.4E-06 1.9E-10 50.1 1.8 42 71-114 56-97 (140)
306 2e0q_A Thioredoxin; electron t 97.8 1.1E-05 3.9E-10 45.4 3.0 42 71-114 47-88 (104)
307 2yzu_A Thioredoxin; redox prot 97.8 1.2E-05 4.1E-10 45.8 3.1 42 71-114 50-91 (109)
308 3gv1_A Disulfide interchange p 97.8 2.1E-06 7.1E-11 52.9 -0.2 24 2-25 16-39 (147)
309 1thx_A Thioredoxin, thioredoxi 97.8 1.2E-05 3.9E-10 46.4 3.0 36 71-106 57-92 (115)
310 3d6i_A Monothiol glutaredoxin- 97.8 1.3E-05 4.4E-10 46.2 3.1 36 71-106 54-89 (112)
311 1xwb_A Thioredoxin; dimerizati 97.8 1.4E-05 4.6E-10 45.4 3.1 36 71-106 52-87 (106)
312 1v98_A Thioredoxin; oxidoreduc 97.8 1.4E-05 4.6E-10 48.2 3.2 42 71-114 82-123 (140)
313 3f3q_A Thioredoxin-1; His TAG, 97.8 1.2E-05 4.3E-10 46.4 2.7 36 71-106 55-90 (109)
314 3feu_A Putative lipoprotein; a 97.8 1.2E-05 4E-10 51.2 2.7 38 2-43 24-61 (185)
315 2rem_A Disulfide oxidoreductas 97.8 6.9E-05 2.4E-09 47.3 6.1 39 2-42 27-65 (193)
316 1fb6_A Thioredoxin M; electron 97.8 1.4E-05 4.9E-10 45.3 2.6 36 71-106 50-85 (105)
317 1r26_A Thioredoxin; redox-acti 97.8 1.6E-05 5.6E-10 47.2 2.9 36 71-106 68-103 (125)
318 2l5l_A Thioredoxin; structural 97.7 2.7E-05 9.4E-10 46.6 3.6 42 71-115 70-112 (136)
319 1z6m_A Conserved hypothetical 97.7 0.00011 3.7E-09 45.8 6.4 39 2-42 29-69 (175)
320 1qgv_A Spliceosomal protein U5 97.7 3.2E-05 1.1E-09 47.0 3.6 36 71-106 55-90 (142)
321 2xc2_A Thioredoxinn; oxidoredu 97.7 2.1E-05 7E-10 45.8 2.6 36 71-106 63-98 (117)
322 3ed3_A Protein disulfide-isome 97.7 3.3E-05 1.1E-09 52.5 4.0 46 71-116 67-129 (298)
323 2vlu_A Thioredoxin, thioredoxi 97.7 2.8E-05 9.4E-10 45.5 2.9 36 71-106 65-100 (122)
324 1ep7_A Thioredoxin CH1, H-type 97.7 1.9E-05 6.6E-10 45.4 2.1 36 71-106 56-91 (112)
325 3aps_A DNAJ homolog subfamily 97.7 3.6E-05 1.2E-09 45.0 3.2 36 71-106 53-88 (122)
326 2vim_A Thioredoxin, TRX; thior 97.6 2.7E-05 9.2E-10 44.0 2.6 36 71-106 50-85 (104)
327 2ec4_A FAS-associated factor 1 97.6 0.00014 4.8E-09 46.1 6.1 44 1-46 56-102 (178)
328 3qou_A Protein YBBN; thioredox 97.6 2.8E-05 9.7E-10 52.1 3.0 42 71-114 58-99 (287)
329 2wz9_A Glutaredoxin-3; protein 97.6 4.2E-05 1.4E-09 46.8 3.4 36 71-106 63-98 (153)
330 1xiy_A Peroxiredoxin, pfaop; a 97.6 0.00034 1.2E-08 44.4 7.8 83 2-103 45-145 (182)
331 1syr_A Thioredoxin; SGPP, stru 97.6 3.3E-05 1.1E-09 44.6 2.8 36 71-106 57-92 (112)
332 2oe3_A Thioredoxin-3; electron 97.6 3.4E-05 1.2E-09 44.9 2.8 36 71-106 61-96 (114)
333 1xfl_A Thioredoxin H1; AT3G510 97.6 5.6E-05 1.9E-09 44.7 3.7 36 71-106 69-104 (124)
334 2l57_A Uncharacterized protein 97.6 3.9E-05 1.3E-09 45.2 2.8 36 70-105 57-95 (126)
335 3dxb_A Thioredoxin N-terminall 97.6 4.7E-05 1.6E-09 49.4 3.3 42 71-114 62-103 (222)
336 2j23_A Thioredoxin; immune pro 97.6 2.9E-05 1E-09 45.6 2.1 35 72-106 67-101 (121)
337 1fo5_A Thioredoxin; disulfide 97.6 0.00011 3.8E-09 39.9 4.3 32 71-104 34-65 (85)
338 1t1v_A SH3BGRL3, SH3 domain-bi 97.6 6.9E-05 2.4E-09 42.2 3.5 53 1-61 1-65 (93)
339 3l9s_A Thiol:disulfide interch 97.6 5.9E-05 2E-09 48.1 3.6 41 2-42 23-66 (191)
340 1aba_A Glutaredoxin; electron 97.6 0.00011 3.8E-09 40.8 4.2 32 4-43 2-37 (87)
341 2djk_A PDI, protein disulfide- 97.5 0.00017 5.9E-09 43.1 5.3 33 70-102 53-87 (133)
342 2yj7_A LPBCA thioredoxin; oxid 96.7 1.2E-05 4.2E-10 45.5 0.0 42 71-114 51-92 (106)
343 2vm1_A Thioredoxin, thioredoxi 97.5 7E-05 2.4E-09 43.3 3.3 36 71-106 59-94 (118)
344 3emx_A Thioredoxin; structural 97.5 2.7E-05 9.4E-10 46.7 1.4 24 43-66 79-102 (135)
345 3gix_A Thioredoxin-like protei 97.5 0.0001 3.5E-09 45.1 4.0 36 71-106 55-90 (149)
346 1nm3_A Protein HI0572; hybrid, 97.5 0.00018 6.2E-09 47.1 5.2 49 4-60 172-223 (241)
347 2pu9_C TRX-F, thioredoxin F-ty 97.5 0.00011 3.8E-09 42.1 3.5 37 70-106 54-91 (111)
348 2f51_A Thioredoxin; electron t 97.5 7.8E-05 2.7E-09 43.6 2.8 32 71-102 54-85 (118)
349 1ti3_A Thioredoxin H, PTTRXH1; 97.5 7.2E-05 2.5E-09 42.9 2.6 36 71-106 57-92 (113)
350 1nho_A Probable thioredoxin; b 97.4 0.00014 4.8E-09 39.5 3.6 32 71-104 33-64 (85)
351 3d22_A TRXH4, thioredoxin H-ty 97.4 7.7E-05 2.6E-09 44.6 2.6 37 70-106 76-112 (139)
352 1faa_A Thioredoxin F; electron 97.4 7E-05 2.4E-09 43.9 2.3 37 70-106 67-104 (124)
353 1wmj_A Thioredoxin H-type; str 97.4 5.3E-05 1.8E-09 44.6 1.6 36 71-106 67-102 (130)
354 3cxg_A Putative thioredoxin; m 97.4 8.2E-05 2.8E-09 44.5 2.4 34 71-104 70-105 (133)
355 3q6o_A Sulfhydryl oxidase 1; p 97.4 0.0002 7E-09 46.9 4.5 35 71-105 65-101 (244)
356 2h8l_A Protein disulfide-isome 97.3 0.0027 9.3E-08 41.8 9.5 54 2-64 26-79 (252)
357 3fk8_A Disulphide isomerase; A 97.3 0.00025 8.7E-09 42.0 4.0 35 71-105 63-104 (133)
358 2l4c_A Endoplasmic reticulum r 97.3 0.00042 1.4E-08 41.3 4.8 32 2-39 41-72 (124)
359 3l4n_A Monothiol glutaredoxin- 97.3 0.00011 3.9E-09 44.0 2.3 55 4-61 16-75 (127)
360 2wci_A Glutaredoxin-4; redox-a 97.3 0.00013 4.6E-09 44.2 2.6 44 10-61 48-95 (135)
361 3uvt_A Thioredoxin domain-cont 97.3 0.00015 5.2E-09 41.3 2.6 40 74-115 59-98 (111)
362 3zyw_A Glutaredoxin-3; metal b 97.3 0.00021 7.3E-09 41.7 3.2 50 4-61 18-76 (111)
363 2ct6_A SH3 domain-binding glut 97.2 0.00046 1.6E-08 40.2 4.4 50 4-61 10-77 (111)
364 1wou_A Thioredoxin -related pr 97.2 0.0003 1E-08 41.3 3.5 36 71-106 63-105 (123)
365 3evi_A Phosducin-like protein 97.2 0.00018 6.3E-09 42.5 2.4 34 70-106 53-86 (118)
366 2kuc_A Putative disulphide-iso 97.2 0.00024 8.2E-09 41.8 2.6 35 71-105 62-99 (130)
367 2axo_A Hypothetical protein AT 97.1 0.0014 4.9E-08 44.1 6.4 57 2-62 44-120 (270)
368 3c7m_A Thiol:disulfide interch 97.1 0.00099 3.4E-08 41.9 5.4 40 2-43 19-59 (195)
369 1x5e_A Thioredoxin domain cont 97.1 0.00029 9.8E-09 41.3 2.4 39 74-115 58-96 (126)
370 1mek_A Protein disulfide isome 97.1 0.00023 8E-09 40.9 1.8 58 7-66 34-91 (120)
371 3iv4_A Putative oxidoreductase 97.0 0.00038 1.3E-08 40.8 2.7 37 70-106 53-94 (112)
372 3dml_A Putative uncharacterize 97.0 0.00048 1.6E-08 40.7 3.0 35 72-106 53-89 (116)
373 2wem_A Glutaredoxin-related pr 97.0 0.0008 2.7E-08 39.7 3.8 44 10-61 33-81 (118)
374 2xhf_A Peroxiredoxin 5; oxidor 97.0 0.00089 3E-08 42.1 4.1 83 2-103 44-143 (171)
375 2dj1_A Protein disulfide-isome 97.0 0.00036 1.2E-08 41.5 2.2 39 74-115 72-110 (140)
376 3ipz_A Monothiol glutaredoxin- 97.0 0.00067 2.3E-08 39.3 3.2 43 10-60 31-77 (109)
377 2trc_P Phosducin, MEKA, PP33; 97.0 0.00021 7.3E-09 46.5 1.1 36 70-106 150-185 (217)
378 3t58_A Sulfhydryl oxidase 1; o 96.9 0.0013 4.4E-08 48.1 5.0 35 71-105 65-101 (519)
379 2dj3_A Protein disulfide-isome 96.9 0.00085 2.9E-08 39.5 3.3 39 75-113 63-101 (133)
380 2djj_A PDI, protein disulfide- 96.9 0.002 6.9E-08 37.2 4.8 14 53-66 78-91 (121)
381 2dbc_A PDCL2, unnamed protein 96.9 0.0013 4.6E-08 39.2 4.1 34 70-106 60-93 (135)
382 3gx8_A Monothiol glutaredoxin- 96.8 0.0021 7.3E-08 38.0 4.7 44 10-61 29-79 (121)
383 2c0g_A ERP29 homolog, windbeut 96.7 0.00076 2.6E-08 44.9 2.5 24 41-64 73-103 (248)
384 2dj0_A Thioredoxin-related tra 96.7 0.00067 2.3E-08 40.4 2.1 33 74-106 62-100 (137)
385 3kp8_A Vkorc1/thioredoxin doma 96.7 0.0011 3.9E-08 38.1 3.0 22 81-104 54-75 (106)
386 2ju5_A Thioredoxin disulfide i 96.7 0.0023 7.8E-08 39.0 4.2 14 49-62 109-122 (154)
387 1a0r_P Phosducin, MEKA, PP33; 96.6 0.00082 2.8E-08 44.6 1.9 36 70-106 163-198 (245)
388 2lst_A Thioredoxin; structural 95.6 0.00035 1.2E-08 41.1 0.0 31 71-101 54-86 (130)
389 3gha_A Disulfide bond formatio 96.6 0.0068 2.3E-07 38.8 6.1 42 2-43 31-73 (202)
390 2qc7_A ERP31, ERP28, endoplasm 96.4 0.0016 5.4E-08 43.1 2.3 25 42-66 67-93 (240)
391 3ira_A Conserved protein; meth 96.3 0.0029 9.8E-08 39.8 3.0 36 71-106 74-118 (173)
392 3bj5_A Protein disulfide-isome 96.2 0.0097 3.3E-07 36.3 5.1 56 7-64 39-98 (147)
393 3qcp_A QSOX from trypanosoma b 96.2 0.0023 7.9E-08 46.3 2.5 58 9-66 54-114 (470)
394 1ilo_A Conserved hypothetical 96.2 0.0034 1.1E-07 33.2 2.5 30 71-105 31-60 (77)
395 2fgx_A Putative thioredoxin; N 96.1 0.0037 1.3E-07 36.3 2.5 35 71-106 58-92 (107)
396 1z6n_A Hypothetical protein PA 96.1 0.0032 1.1E-07 39.3 2.4 36 71-106 85-123 (167)
397 3f4s_A Alpha-DSBA1, putative u 96.1 0.019 6.3E-07 37.5 6.1 41 2-42 41-82 (226)
398 1t4y_A Adaptive-response senso 96.1 0.043 1.5E-06 31.6 6.8 58 5-62 15-72 (105)
399 3bci_A Disulfide bond protein 96.0 0.025 8.5E-07 35.3 6.2 40 2-41 13-53 (186)
400 1ttz_A Conserved hypothetical 95.9 0.0054 1.9E-07 34.1 2.6 31 74-106 29-59 (87)
401 3ph9_A Anterior gradient prote 95.6 0.026 8.8E-07 34.6 5.1 34 73-106 79-114 (151)
402 3gn3_A Putative protein-disulf 95.6 0.019 6.4E-07 36.2 4.6 38 2-41 16-54 (182)
403 1u6t_A SH3 domain-binding glut 95.4 0.022 7.5E-07 33.7 4.1 52 3-62 1-70 (121)
404 1sen_A Thioredoxin-like protei 95.4 0.011 3.8E-07 36.4 3.0 35 72-106 79-117 (164)
405 2jad_A Yellow fluorescent prot 95.3 0.0068 2.3E-07 42.4 1.7 21 4-24 263-284 (362)
406 3gmf_A Protein-disulfide isome 95.3 0.076 2.6E-06 34.0 6.6 41 2-42 17-58 (205)
407 2x8g_A Thioredoxin glutathione 95.1 0.018 6.2E-07 42.4 3.6 50 4-61 20-76 (598)
408 1wwj_A Circadian clock protein 95.0 0.045 1.5E-06 31.5 4.3 63 2-65 8-70 (105)
409 3ec3_A Protein disulfide-isome 95.0 0.036 1.2E-06 36.4 4.5 55 2-65 27-81 (250)
410 1z3e_A Regulatory protein SPX; 94.7 0.047 1.6E-06 32.5 4.2 35 4-46 3-37 (132)
411 2h8l_A Protein disulfide-isome 94.7 0.076 2.6E-06 34.8 5.6 63 3-65 132-203 (252)
412 3kp9_A Vkorc1/thioredoxin doma 93.9 0.037 1.3E-06 37.6 2.8 21 82-104 240-260 (291)
413 3tdg_A DSBG, putative uncharac 93.9 0.06 2.1E-06 36.3 3.8 27 2-28 149-175 (273)
414 2k8s_A Thioredoxin; dimer, str 93.6 0.022 7.4E-07 30.6 0.9 30 73-104 34-64 (80)
415 3l78_A Regulatory protein SPX; 93.5 0.12 3.9E-06 30.3 4.2 35 4-46 2-36 (120)
416 1rw1_A Conserved hypothetical 93.2 0.09 3.1E-06 30.4 3.3 34 4-45 2-35 (114)
417 3fz4_A Putative arsenate reduc 92.8 0.22 7.7E-06 29.1 4.7 35 4-46 5-39 (120)
418 2kok_A Arsenate reductase; bru 92.5 0.13 4.4E-06 30.1 3.3 34 4-45 7-40 (120)
419 1zma_A Bacterocin transport ac 92.0 0.012 3.9E-07 33.9 -1.7 25 42-66 73-97 (118)
420 2dlx_A UBX domain-containing p 91.2 0.21 7E-06 30.6 3.3 31 72-102 78-110 (153)
421 1ego_A Glutaredoxin; electron 91.0 0.13 4.5E-06 27.4 2.1 33 72-106 31-69 (85)
422 2wul_A Glutaredoxin related pr 90.7 0.3 1E-05 28.6 3.5 44 10-61 33-81 (118)
423 3gkx_A Putative ARSC family re 90.6 0.24 8.1E-06 29.0 3.0 35 4-46 6-40 (120)
424 1s3c_A Arsenate reductase; ARS 90.5 0.14 4.7E-06 31.0 2.0 37 1-45 1-37 (141)
425 2g2q_A Glutaredoxin-2; thiored 90.4 1.1 3.6E-05 26.3 5.5 36 2-43 3-38 (124)
426 3rdw_A Putative arsenate reduc 89.9 0.13 4.5E-06 30.2 1.5 38 1-46 4-41 (121)
427 1t3b_A Thiol:disulfide interch 89.0 0.15 5.2E-06 32.6 1.4 24 81-105 169-192 (211)
428 3kzq_A Putative uncharacterize 87.9 1.3 4.3E-05 27.9 5.2 38 2-39 3-40 (208)
429 2e7p_A Glutaredoxin; thioredox 87.8 0.19 6.6E-06 28.4 1.2 22 83-106 63-84 (116)
430 2hze_A Glutaredoxin-1; thiored 87.7 0.51 1.7E-05 26.9 3.0 31 74-106 49-86 (114)
431 2in3_A Hypothetical protein; D 86.8 0.26 9.1E-06 31.1 1.6 26 3-28 9-34 (216)
432 2h30_A Thioredoxin, peptide me 86.5 0.31 1.1E-05 29.1 1.7 28 38-65 103-130 (164)
433 1wjk_A C330018D20RIK protein; 85.9 0.89 3E-05 25.3 3.3 32 71-105 43-76 (100)
434 1lu4_A Soluble secreted antige 85.7 1.4 4.7E-05 25.1 4.2 41 20-65 68-108 (136)
435 1eej_A Thiol:disulfide interch 85.7 0.24 8.2E-06 31.7 0.9 24 81-105 169-192 (216)
436 2fwh_A Thiol:disulfide interch 85.1 0.15 5.3E-06 29.8 -0.2 24 43-66 78-102 (134)
437 3ec3_A Protein disulfide-isome 85.0 2.4 8.3E-05 27.5 5.6 47 15-64 152-201 (250)
438 3f0i_A Arsenate reductase; str 84.6 0.64 2.2E-05 27.1 2.3 33 4-44 6-38 (119)
439 3bci_A Disulfide bond protein 83.9 0.48 1.7E-05 29.3 1.7 23 81-105 137-159 (186)
440 1kng_A Thiol:disulfide interch 83.8 0.55 1.9E-05 27.6 1.9 41 20-64 85-125 (156)
441 2in3_A Hypothetical protein; D 83.8 2.6 8.8E-05 26.4 5.2 27 2-28 11-37 (216)
442 2lja_A Putative thiol-disulfid 83.2 1 3.5E-05 26.4 2.9 41 21-65 77-117 (152)
443 3fkf_A Thiol-disulfide oxidore 82.9 0.96 3.3E-05 26.2 2.7 44 20-65 80-123 (148)
444 3gyk_A 27KDA outer membrane pr 82.5 0.46 1.6E-05 28.9 1.2 19 81-99 132-150 (175)
445 4evm_A Thioredoxin family prot 80.8 0.76 2.6E-05 26.0 1.7 24 42-65 90-113 (138)
446 2lus_A Thioredoxion; CR-Trp16, 81.6 0.33 1.1E-05 28.2 0.0 25 41-65 93-117 (143)
447 3kzq_A Putative uncharacterize 80.3 0.73 2.5E-05 29.1 1.6 24 81-104 157-180 (208)
448 1v58_A Thiol:disulfide interch 79.3 0.71 2.4E-05 30.1 1.3 22 81-102 187-208 (241)
449 4dvc_A Thiol:disulfide interch 78.7 0.67 2.3E-05 28.2 1.0 19 81-99 138-156 (184)
450 3raz_A Thioredoxin-related pro 78.6 1.9 6.3E-05 25.3 3.0 44 20-65 69-114 (151)
451 3bj5_A Protein disulfide-isome 78.5 3.1 0.00011 24.9 3.9 33 70-102 63-99 (147)
452 3fw2_A Thiol-disulfide oxidore 78.2 1.7 5.8E-05 25.4 2.7 44 20-65 82-125 (150)
453 2l5o_A Putative thioredoxin; s 78.2 0.94 3.2E-05 26.5 1.5 26 40-65 90-115 (153)
454 3gha_A Disulfide bond formatio 77.7 1 3.6E-05 28.5 1.7 23 81-105 151-173 (202)
455 3f4s_A Alpha-DSBA1, putative u 74.7 1.3 4.3E-05 28.7 1.5 25 81-105 158-184 (226)
456 2imf_A HCCA isomerase, 2-hydro 71.8 6.5 0.00022 24.5 4.3 35 4-40 3-37 (203)
457 3kh7_A Thiol:disulfide interch 70.2 1.7 5.9E-05 26.5 1.3 42 20-65 100-141 (176)
458 2on5_A Nagst-2, Na glutathione 68.9 15 0.00051 22.4 5.5 56 1-62 1-56 (206)
459 2ws2_A NU-class GST, glutathio 68.3 12 0.0004 22.9 4.9 56 1-62 1-56 (204)
460 3ubk_A Glutathione transferase 63.4 8.1 0.00028 24.6 3.6 56 1-62 1-56 (242)
461 3ir4_A Glutaredoxin 2; glutath 63.0 7.5 0.00026 24.2 3.3 52 4-61 4-55 (218)
462 3lxz_A Glutathione S-transfera 62.8 14 0.00047 23.1 4.6 55 1-62 1-55 (229)
463 3tfg_A ALR2278 protein; heme-b 62.7 18 0.00063 22.5 5.0 41 3-45 130-170 (189)
464 1z9h_A Membrane-associated pro 60.8 32 0.0011 22.5 6.3 52 4-62 15-66 (290)
465 1zl9_A GST class-sigma, glutat 59.4 14 0.00049 22.6 4.1 56 1-62 1-58 (207)
466 4id0_A Glutathione S-transfera 57.9 29 0.001 21.2 5.6 52 4-61 3-59 (214)
467 3m3m_A Glutathione S-transfera 55.8 16 0.00055 22.4 3.9 56 1-62 1-60 (210)
468 1r4w_A Glutathione S-transfera 55.4 13 0.00045 23.5 3.5 27 3-29 7-33 (226)
469 3vhs_A ATPase wrnip1; zinc fin 54.1 0.79 2.7E-05 19.2 -1.6 11 11-21 8-18 (29)
470 3m8n_A Possible glutathione S- 53.7 18 0.0006 22.6 3.9 56 1-62 1-60 (225)
471 3kgk_A Arsenical resistance op 52.2 17 0.00058 20.9 3.2 53 34-93 40-102 (110)
472 3rpp_A Glutathione S-transfera 51.5 6 0.00021 25.5 1.4 35 3-39 7-41 (234)
473 1tw9_A Glutathione S-transfera 50.1 15 0.00052 22.4 3.1 56 1-62 1-56 (206)
474 2jvx_A NF-kappa-B essential mo 49.3 1.4 4.6E-05 19.0 -1.4 20 11-30 5-24 (28)
475 3ktb_A Arsenical resistance op 48.6 15 0.00051 21.0 2.5 28 34-61 43-80 (106)
476 2on7_A Nagst-1, Na glutathione 47.9 13 0.00044 22.7 2.5 56 1-62 1-56 (206)
477 1yq1_A Glutathione S-transfera 47.0 29 0.00098 21.1 4.0 56 1-62 1-57 (208)
478 2imi_A Epsilon-class glutathio 46.7 48 0.0016 20.4 5.1 55 1-61 1-59 (221)
479 3vln_A GSTO-1, glutathione S-t 46.5 49 0.0017 20.7 5.2 53 4-62 24-77 (241)
480 4hoj_A REGF protein; GST, glut 45.7 18 0.00062 22.2 2.9 55 1-61 1-56 (210)
481 2hyx_A Protein DIPZ; thioredox 44.9 9.7 0.00033 26.3 1.7 41 20-65 133-173 (352)
482 3f6d_A Adgstd4-4, glutathione 43.2 33 0.0011 21.0 3.9 51 5-61 2-56 (219)
483 2r4v_A XAP121, chloride intrac 42.3 20 0.00069 22.8 2.8 48 8-61 26-74 (247)
484 3q18_A GSTO-2, glutathione S-t 39.2 69 0.0024 20.0 5.4 52 4-61 24-76 (239)
485 2ahe_A Chloride intracellular 38.5 49 0.0017 21.4 4.3 48 8-61 31-79 (267)
486 3rbt_A Glutathione transferase 38.3 56 0.0019 20.6 4.5 53 4-62 27-80 (246)
487 4iel_A Glutathione S-transfera 38.2 53 0.0018 20.4 4.3 54 3-62 23-80 (229)
488 4glt_A Glutathione S-transfera 38.1 71 0.0024 19.8 5.0 52 5-62 24-76 (225)
489 2wb9_A Glutathione transferase 37.2 58 0.002 19.8 4.3 55 1-61 3-57 (211)
490 3fhk_A UPF0403 protein YPHP; d 36.2 21 0.00071 21.6 1.9 23 92-114 105-130 (147)
491 3ay8_A Glutathione S-transfera 36.1 50 0.0017 20.2 3.9 55 1-61 1-59 (216)
492 3bby_A Uncharacterized GST-lik 36.1 38 0.0013 20.7 3.3 53 3-61 6-64 (215)
493 2hnl_A Glutathione S-transfera 35.3 33 0.0011 21.4 2.9 56 1-62 25-80 (225)
494 4f03_A Glutathione transferase 34.5 37 0.0013 21.2 3.2 16 9-24 19-34 (253)
495 4ecj_A Glutathione S-transfera 33.7 59 0.002 20.5 4.0 55 1-62 1-59 (244)
496 3lyp_A Stringent starvation pr 33.5 31 0.0011 21.2 2.6 52 4-61 9-61 (215)
497 1oe8_A Glutathione S-transfera 32.6 52 0.0018 20.0 3.5 55 1-61 3-57 (211)
498 3r2q_A Uncharacterized GST-lik 32.4 25 0.00087 21.2 2.0 52 5-62 2-54 (202)
499 3lyk_A Stringent starvation pr 32.2 29 0.001 21.3 2.3 52 4-61 7-59 (216)
500 3dmo_A Cytidine deaminase; str 31.0 22 0.00076 21.2 1.5 15 9-23 93-107 (138)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.93 E-value=7.2e-26 Score=149.67 Aligned_cols=113 Identities=35% Similarity=0.613 Sum_probs=99.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCc-ceEEEEEeCCCcccccccCCccccceEEEcCce-------------
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNH-KVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT------------- 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~------------- 66 (116)
.+++|+|||+||++|+++.|.++++++.+++.+ .+.++.+|++++.+++++|+++++||++++++|
T Consensus 33 ~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~ 112 (241)
T 3idv_A 33 DTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAVDYEGSRTQEE 112 (241)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEECCSCSCHHH
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcccccCcccHHH
Confidence 368999999999999999999999999998743 499999999999999999999999999999876
Q ss_pred ---------------------------------------eee--------------------------ceeeEEEEeccC
Q psy3452 67 ---------------------------------------IMI--------------------------IRLALAAIDCTE 81 (116)
Q Consensus 67 ---------------------------------------v~f--------------------------~~~~~~~v~~~~ 81 (116)
+.| ..+.++.+|++.
T Consensus 113 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~ 192 (241)
T 3idv_A 113 IVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA 192 (241)
T ss_dssp HHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT
T ss_pred HHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC
Confidence 222 228999999999
Q ss_pred ccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
+.+++++|+|+++||+++|++|+. +.|.|..+
T Consensus 193 ~~~l~~~~~v~~~Pt~~~~~~g~~---~~~~g~~~ 224 (241)
T 3idv_A 193 ETDLAKRFDVSGYPTLKIFRKGRP---YDYNGPRE 224 (241)
T ss_dssp CHHHHHHTTCCSSSEEEEEETTEE---EECCSCCS
T ss_pred CHHHHHHcCCcccCEEEEEECCeE---EEecCCCC
Confidence 999999999999999999998865 44888753
No 2
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.88 E-value=1.7e-22 Score=125.98 Aligned_cols=64 Identities=17% Similarity=0.115 Sum_probs=60.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+|+|+|||+||++|+.+.|.++++++++++ .+.++++|++++++++++|+|+++||++||+++
T Consensus 42 k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G 105 (160)
T 2av4_A 42 RLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVMFFYRN 105 (160)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEEEEETT
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEEEEECC
Confidence 3799999999999999999999999999987 689999999999999999999999999888775
No 3
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.87 E-value=4.8e-22 Score=130.46 Aligned_cols=109 Identities=17% Similarity=0.307 Sum_probs=93.2
Q ss_pred eEEEEEEcC-CCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC--cccccccCCccccceEEEcCce------------
Q psy3452 2 FYSILFYSP-GCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE--HGPLCKEYDIKGYPTFHHLALT------------ 66 (116)
Q Consensus 2 ~v~v~F~a~-wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~------------ 66 (116)
+++++||++ ||++|+++.|.++++++. .+ ++.++.+|+++ +++++++|+++++||+++++++
T Consensus 24 v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~--~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~ 100 (226)
T 1a8l_A 24 VKLIVFVRKDHCQYCDQLKQLVQELSEL-TD--KLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPA 100 (226)
T ss_dssp EEEEEEECSSSCTTHHHHHHHHHHHHTT-CT--TEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCC
T ss_pred eEEEEEecCCCCchhHHHHHHHHHHHhh-CC--ceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCc
Confidence 467999999 999999999999999865 33 79999999999 9999999999999999999654
Q ss_pred --------------------------------------eee----------------------c-----eeeEEEEeccC
Q psy3452 67 --------------------------------------IMI----------------------I-----RLALAAIDCTE 81 (116)
Q Consensus 67 --------------------------------------v~f----------------------~-----~~~~~~v~~~~ 81 (116)
+.| . ++.++.+|++.
T Consensus 101 ~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~ 180 (226)
T 1a8l_A 101 GHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 180 (226)
T ss_dssp TTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG
T ss_pred HHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc
Confidence 112 3 68899999999
Q ss_pred ccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
+.+++++|+|+++||++++++|+.+ ..|.|..
T Consensus 181 ~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~~ 212 (226)
T 1a8l_A 181 YPEWADQYNVMAVPKIVIQVNGEDR--VEFEGAY 212 (226)
T ss_dssp CHHHHHHTTCCSSCEEEEEETTEEE--EEEESCC
T ss_pred CHHHHHhCCCcccCeEEEEeCCcee--EEEcCCC
Confidence 9999999999999999999888653 4565643
No 4
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=128.78 Aligned_cols=65 Identities=28% Similarity=0.663 Sum_probs=59.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCc-ceEEEEEeC--CCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNH-KVALAAIDC--TEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~--~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+|||+||++|+++.|.++++++.+++.. .+.++.+|+ +++.+++++|+|+++||++++++
T Consensus 31 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 31 SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECT
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeC
Confidence 478999999999999999999999999998622 699999999 67889999999999999999997
No 5
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.86 E-value=7.3e-22 Score=116.49 Aligned_cols=63 Identities=24% Similarity=0.445 Sum_probs=54.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+|||+||++|+.+.|.++++++.++ .+.++++|++++++++++|+|+++||++++++|
T Consensus 21 k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G 83 (105)
T 3zzx_A 21 KLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFLFMKNG 83 (105)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEEEEECC
Confidence 378999999999999999999999999886 478888888888888888888888888887764
No 6
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.86 E-value=2.4e-21 Score=117.14 Aligned_cols=82 Identities=18% Similarity=0.295 Sum_probs=66.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEecc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCT 80 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~ 80 (116)
.+++|+|||+||++|+++.|.++++++.+.... .. ..+.++.+|++
T Consensus 34 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~-----------~~-----------------------~~v~~~~vd~~ 79 (127)
T 3h79_A 34 KDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKR-----------NH-----------------------LTFVAARIDGE 79 (127)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHHTST-----------TT-----------------------TTEEEEEEETT
T ss_pred CCEEEEEECCccHHHHHHhHHHHHHHHHHHhcc-----------cC-----------------------CCeEEEEEEcc
Confidence 378999999999999999999999998875311 00 24566777888
Q ss_pred CccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
.+.+++++|+|+++||+++|++|+++.+..|.|..+
T Consensus 80 ~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~ 115 (127)
T 3h79_A 80 KYPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRY 115 (127)
T ss_dssp TCHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCCC
T ss_pred ccHhHHHhcCCccCCEEEEEeCCCCCCceEecCCcc
Confidence 888899999999999999999888766678988754
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.85 E-value=8.9e-21 Score=143.10 Aligned_cols=110 Identities=22% Similarity=0.496 Sum_probs=98.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce---------------
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT--------------- 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~--------------- 66 (116)
+++|+|||+||++|+++.|.++++++.+++ ++.++.+|+++++.++++|+++++||+++++++
T Consensus 457 ~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~ 534 (780)
T 3apo_A 457 PWLVDFFAPWSPPSRALLPELRKASTLLYG--QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQIL 534 (780)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEECSCSCHHHHH
T ss_pred eEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCceeeecCcccHHHHH
Confidence 689999999999999999999999999986 799999999999999999999999999999765
Q ss_pred ---------------------------------eee-----------------------ceeeEEEEeccCccchhhhcC
Q psy3452 67 ---------------------------------IMI-----------------------IRLALAAIDCTEHGPLCKEYD 90 (116)
Q Consensus 67 ---------------------------------v~f-----------------------~~~~~~~v~~~~~~~~~~~~~ 90 (116)
+.| +.+.++.+||..+..++++++
T Consensus 535 ~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~ 614 (780)
T 3apo_A 535 EFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQEN 614 (780)
T ss_dssp HHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTT
T ss_pred HHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcC
Confidence 111 569999999999999999999
Q ss_pred CCCCCEEEEecCCcc--cCCcCCCC
Q psy3452 91 IKGYPTFQYFHYFNK--QSPSPYHN 113 (116)
Q Consensus 91 v~~~Pt~~~~~~g~~--~~~~~y~g 113 (116)
|+++||+.+|+.|++ .....|+|
T Consensus 615 v~~~Pti~~~~~~~~~~~~~~~y~g 639 (780)
T 3apo_A 615 VQRYPEIRFYPQKSSKAYQYHSYNG 639 (780)
T ss_dssp CCSSSEEEEECCCSSSCCSCEECCC
T ss_pred CCCCCeEEEEcCCCcCccchhhcCC
Confidence 999999999988754 24577888
No 8
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.84 E-value=1.7e-20 Score=123.40 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=87.1
Q ss_pred EcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce---------------------
Q psy3452 8 YSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT--------------------- 66 (116)
Q Consensus 8 ~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~--------------------- 66 (116)
|++||++|+++.|.++++++.+.+.+.+.++++|++++++++++|+|+++||+++|+++
T Consensus 33 ~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~ 112 (229)
T 2ywm_A 33 GCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLING 112 (229)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHH
Confidence 38999999999999999988884323799999999999999999999999999999764
Q ss_pred ----------------------------eee----------------------ceeeEEEEeccCccchhhhcCCCCCCE
Q psy3452 67 ----------------------------IMI----------------------IRLALAAIDCTEHGPLCKEYDIKGYPT 96 (116)
Q Consensus 67 ----------------------------v~f----------------------~~~~~~~v~~~~~~~~~~~~~v~~~Pt 96 (116)
+.| +++.+..+|++.+.+++++|+|+++||
T Consensus 113 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 192 (229)
T 2ywm_A 113 IFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPK 192 (229)
T ss_dssp HHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHHHHHHTTCCSSSE
T ss_pred HHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHHcCCcccCE
Confidence 122 468899999999999999999999999
Q ss_pred EEEecCCcccCCcCCCCCC
Q psy3452 97 FQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 97 ~~~~~~g~~~~~~~y~g~~ 115 (116)
+++ +|+ + ..|.|..
T Consensus 193 ~~~--~G~-~--~~~~G~~ 206 (229)
T 2ywm_A 193 IVI--NKG-V--AEFVGAQ 206 (229)
T ss_dssp EEE--GGG-T--EEEESCC
T ss_pred EEE--CCE-E--EEeeCCC
Confidence 999 554 3 3466643
No 9
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.83 E-value=3.7e-20 Score=134.78 Aligned_cols=65 Identities=26% Similarity=0.618 Sum_probs=59.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccC-cceEEEEEeCC--CcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDN-HKVALAAIDCT--EHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+|||+||++|+++.|.++++++.+++. ..+.++++|++ ++.+++++|+|+++||+++|++
T Consensus 31 k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 31 SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcC
Confidence 37899999999999999999999999999862 26999999995 4889999999999999999995
No 10
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.82 E-value=5.5e-21 Score=117.12 Aligned_cols=63 Identities=6% Similarity=0.116 Sum_probs=59.5
Q ss_pred eEEEEEEcCCC--HHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGC--GYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC--~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+|| ++|+.+.|.++++++++++ ++.++++|.+++++++++|+|+++||+++|++|
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG 99 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPSLAVVQPE 99 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSEEEEEECC
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCEEEEEECC
Confidence 79999999999 9999999999999999987 799999999999999999999999999999986
No 11
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.82 E-value=1.6e-19 Score=127.07 Aligned_cols=65 Identities=26% Similarity=0.611 Sum_probs=59.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhcc----CcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKD----NHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~----~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+++.|.++++++.+++ .+.+.++++|++++.+++++++|+++||+++|++|
T Consensus 24 ~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G 92 (382)
T 2r2j_A 24 VALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNG 92 (382)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETT
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCC
Confidence 789999999999999999999999999853 22699999999999999999999999999999876
No 12
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.81 E-value=1e-19 Score=126.56 Aligned_cols=106 Identities=13% Similarity=0.188 Sum_probs=86.6
Q ss_pred eEEEEEEcCCCHHHHhhhHH-------HHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCcee--ee---
Q psy3452 2 FYSILFYSPGCGYCKKAKPE-------YVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTI--MI--- 69 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~-------~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v--~f--- 69 (116)
+++|+||||||+ |++++|. ++++++.+++. .+.+++|||+++++++++++|+++||+++|++|. .|
T Consensus 30 ~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~G~ 107 (350)
T 1sji_A 30 VLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDRTIEFDGE 107 (350)
T ss_dssp EEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEEEEECSC
T ss_pred eEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc-CcEEEEEeCCCCHHHHHhcCCCccceEEEEECCcEEEecCC
Confidence 789999999999 9999998 89999999764 5999999999999999999999999999998771 11
Q ss_pred --------------------------------------------------------------ceeeEEEEeccCccchhh
Q psy3452 70 --------------------------------------------------------------IRLALAAIDCTEHGPLCK 87 (116)
Q Consensus 70 --------------------------------------------------------------~~~~~~~v~~~~~~~~~~ 87 (116)
..+.++.+ .+.++++
T Consensus 108 ~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f~~~---~~~~~~~ 184 (350)
T 1sji_A 108 FAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFAT---FDKGVAK 184 (350)
T ss_dssp CCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHHTTTTSEEEEE---CCHHHHH
T ss_pred CCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHhhccCcEEEEE---CCHHHHH
Confidence 23334432 3456888
Q ss_pred hcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 88 EYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 88 ~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
+++++ +|++++|++++. ....|+|+
T Consensus 185 ~~~v~-~p~i~~~~~~~~-~~~~y~g~ 209 (350)
T 1sji_A 185 KLSLK-MNEVDFYEPFMD-EPIAIPDK 209 (350)
T ss_dssp HHTCC-TTCEEEECTTCS-SCEECSSS
T ss_pred HcCCC-CCcEEEEeCCCC-CceecCCC
Confidence 99999 999999987533 35789886
No 13
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.81 E-value=1.8e-19 Score=126.31 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=85.9
Q ss_pred eEEEEEEcCCCHHHHhhh------HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce---------
Q psy3452 2 FYSILFYSPGCGYCKKAK------PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT--------- 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~------~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~--------- 66 (116)
+++|+||||||++|+... |.++++++.+++. .+.+++|||++++++|++|+|+++||+++|++|
T Consensus 32 ~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~-~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~~~y~G~~ 110 (367)
T 3us3_A 32 VLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK-GVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEVIEYDGEF 110 (367)
T ss_dssp EEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEEEECCSCC
T ss_pred eEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC-CceEEEEeCcccHHHHHHcCCCcCceEEEEECCcEEEeCCCC
Confidence 689999999999974433 6899999999764 599999999999999999999999999999987
Q ss_pred --------------------------------------eee--------------------ceeeEEEEeccCccchhhh
Q psy3452 67 --------------------------------------IMI--------------------IRLALAAIDCTEHGPLCKE 88 (116)
Q Consensus 67 --------------------------------------v~f--------------------~~~~~~~v~~~~~~~~~~~ 88 (116)
+.| +.+.++.+ .+.+++++
T Consensus 111 ~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F~~~---~~~~~~~~ 187 (367)
T 3us3_A 111 SADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFFAT---FDSKVAKK 187 (367)
T ss_dssp SHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTSCEEEE---CCHHHHHH
T ss_pred CHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEE---CCHHHHHH
Confidence 111 34555553 24578889
Q ss_pred cCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 89 YDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 89 ~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
|+++. |++++|+++.. .+..|.|+
T Consensus 188 ~~v~~-p~i~lf~~~~~-~~~~y~g~ 211 (367)
T 3us3_A 188 LTLKL-NEIDFYEAFME-EPVTIPDK 211 (367)
T ss_dssp HTCCT-TCEEEECTTCS-SCEECSSS
T ss_pred cCCCC-CeEEEEcCCCC-CCeecCCC
Confidence 99985 99999988533 36888885
No 14
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.80 E-value=1.7e-19 Score=111.39 Aligned_cols=64 Identities=20% Similarity=0.108 Sum_probs=59.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+|||+||++|+.+.|.++++++.+++ .+.++.+|++++++++++|+++++||+++|++|
T Consensus 24 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 24 RVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 3789999999999999999999999999976 699999999999999999999999999999876
No 15
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=3.4e-19 Score=108.12 Aligned_cols=65 Identities=28% Similarity=0.540 Sum_probs=48.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+||++||++|+++.|.++++++.+++...+.++.+|+++++.++++|++.++||++++++
T Consensus 26 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 90 (133)
T 2dj3_A 26 KDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPS 90 (133)
T ss_dssp SEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECT
T ss_pred CcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeC
Confidence 37899999999999999999999999999753357777777766655555555555555555443
No 16
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=4.5e-19 Score=121.36 Aligned_cols=63 Identities=37% Similarity=0.743 Sum_probs=58.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC--CcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT--EHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+++.|.++++++.+++ .+.++.+|++ ++.+++++|+|+++||+++|+++
T Consensus 37 ~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g 101 (298)
T 3ed3_A 37 TSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPP 101 (298)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECC
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCccceEEEEECC
Confidence 689999999999999999999999999987 5888889888 67899999999999999999764
No 17
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.79 E-value=1.6e-19 Score=112.32 Aligned_cols=64 Identities=14% Similarity=0.120 Sum_probs=58.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+|||+||++|+.+.|.++++++.+++ .+.++.+|++++++++++|+|.++||++++++|
T Consensus 24 k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 87 (149)
T 3gix_A 24 KVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNG 87 (149)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEECC
Confidence 3799999999999999999999999999976 589999999999999999999999999888775
No 18
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.79 E-value=2.5e-19 Score=104.91 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=47.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+|||+||++|+.+.|.++++++.++ ++.++.+|++++++++++|+++++||++++++|
T Consensus 19 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 81 (105)
T 4euy_A 19 QLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNG 81 (105)
T ss_dssp SEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETT
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCC
Confidence 378999999999999999999999999984 588888888888888888888888888777654
No 19
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.79 E-value=1.4e-20 Score=115.78 Aligned_cols=63 Identities=10% Similarity=-0.019 Sum_probs=58.8
Q ss_pred eEEEEEEcCC--CHHHHhhhHHHHHHHHHhccCcc-eEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPG--CGYCKKAKPEYVKAAEVLKDNHK-VALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~w--C~~C~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+| |++|+.+.|.++++++++++ + +.++++|.+++++++++|+|+++||+++|++|
T Consensus 36 ~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G 101 (140)
T 2qgv_A 36 DGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGG 101 (140)
T ss_dssp SEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETT
T ss_pred CEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCEEEEEECC
Confidence 5889999999 99999999999999999987 6 99999999999999999999999999999986
No 20
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.79 E-value=8.7e-19 Score=132.30 Aligned_cols=103 Identities=20% Similarity=0.506 Sum_probs=93.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce---------------
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT--------------- 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~--------------- 66 (116)
+++|.||+|||++|+++.|.++++++.+++ .+.++.+|++.+..++++++++++||+++++.+
T Consensus 565 ~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~ 642 (780)
T 3apo_A 565 VWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNR 642 (780)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCC
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCC
Confidence 579999999999999999999999999987 799999999999999999999999999998753
Q ss_pred -------------------------------------eee-----------------------ceeeEEEEeccCccchh
Q psy3452 67 -------------------------------------IMI-----------------------IRLALAAIDCTEHGPLC 86 (116)
Q Consensus 67 -------------------------------------v~f-----------------------~~~~~~~v~~~~~~~~~ 86 (116)
+.| +++.++.+|++.+.+++
T Consensus 643 ~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~ 722 (780)
T 3apo_A 643 DAYSLRSWGLGFLPQASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTC 722 (780)
T ss_dssp SHHHHHHHHHTTSCCCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHH
T ss_pred CHHHHHHHHhhhcccccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHH
Confidence 111 46889999999999999
Q ss_pred hhcCCCCCCEEEEecCCccc
Q psy3452 87 KEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 87 ~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++|+|+++||++++++|+.+
T Consensus 723 ~~~~v~~~Pt~~~~~~g~~~ 742 (780)
T 3apo_A 723 QKAGIKAYPSVKLYQYERAK 742 (780)
T ss_dssp HHTTCCSSSEEEEEEEETTT
T ss_pred HhcCCCcCCEEEEEcCCCcc
Confidence 99999999999999887654
No 21
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.79 E-value=4.6e-19 Score=105.24 Aligned_cols=79 Identities=38% Similarity=0.733 Sum_probs=60.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEecc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCT 80 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~ 80 (116)
.+++|+||++||++|+++.|.++++++.+++.+ ..+.++.+|++
T Consensus 25 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~------------------------------------~~v~~~~vd~~ 68 (120)
T 1mek_A 25 KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEG------------------------------------SEIRLAKVDAT 68 (120)
T ss_dssp SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTC------------------------------------CCCBCEEEETT
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC------------------------------------CcEEEEEEcCC
Confidence 368999999999999999999999999887532 12344566666
Q ss_pred CccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
.+.+++++|+|+++||++++++|+.+....|.|..
T Consensus 69 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~ 103 (120)
T 1mek_A 69 EESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGR 103 (120)
T ss_dssp TCCSSHHHHTCCSSSEEEEEESSCSSSCEECCCCS
T ss_pred CCHHHHHHCCCCcccEEEEEeCCCcCCcccccCcc
Confidence 66777888888888888888777654456666654
No 22
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.78 E-value=5.2e-19 Score=107.01 Aligned_cols=63 Identities=19% Similarity=0.383 Sum_probs=50.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+||++||++|+++.|.++++++.+++ ++.++.+|++++++++++++++++||++++++
T Consensus 43 k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 43 TVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKN 105 (128)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEET
T ss_pred CEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEEC
Confidence 4789999999999999999999999999986 67777777776666666666666666665544
No 23
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.78 E-value=8.5e-19 Score=102.97 Aligned_cols=62 Identities=32% Similarity=0.708 Sum_probs=42.5
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccC-cceEEEEEeCCCcccccccCCccccceEEEc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDN-HKVALAAIDCTEHGPLCKEYDIKGYPTFHHL 63 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 63 (116)
+++|+||++||++|+++.|.++++++.+... ..+.++.+|+++++++++++++.++||++++
T Consensus 23 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 85 (111)
T 3uvt_A 23 ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLF 85 (111)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEE
Confidence 6899999999999999999999999887643 1455555555544444444444444444443
No 24
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.78 E-value=1.1e-18 Score=125.61 Aligned_cols=63 Identities=38% Similarity=0.726 Sum_probs=60.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+++.|.++++++.+++ .+.++++|++++++++++++|+++||+++|++|
T Consensus 23 ~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g 85 (481)
T 3f8u_A 23 LMLVEFFAPWCGHAKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDG 85 (481)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCCEEEEETTTCHHHHHHTTCCEESEEEEEETT
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhcC--ceEEEEEECCCCHHHHHhcCCCCCCEEEEEeCC
Confidence 789999999999999999999999999987 599999999999999999999999999999887
No 25
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.77 E-value=6.6e-19 Score=112.37 Aligned_cols=66 Identities=17% Similarity=0.316 Sum_probs=58.0
Q ss_pred eEEEEEEc-------CCCHHHHhhhHHHHHHHHHhccC---cceEEEEEeCCCcccccccCCccccceEEEcCcee
Q psy3452 2 FYSILFYS-------PGCGYCKKAKPEYVKAAEVLKDN---HKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTI 67 (116)
Q Consensus 2 ~v~v~F~a-------~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v 67 (116)
+++|+||| +||++|+.+.|.++++++++... +++.++++|++++++++++|+|+++||+++|++|.
T Consensus 39 ~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 39 FNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp EEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCC
T ss_pred cEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCC
Confidence 68999999 49999999999999999999711 27899999999999999999999999999988873
No 26
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.77 E-value=5.4e-19 Score=105.40 Aligned_cols=63 Identities=22% Similarity=0.384 Sum_probs=51.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ +.++.+|++++++++++|++.++||++++++|
T Consensus 32 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 94 (116)
T 3qfa_C 32 KLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPTFQFFKKG 94 (116)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSEEEEESSS
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccEEEEEeCC
Confidence 3689999999999999999999999998864 78888888777777777777777777766654
No 27
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.77 E-value=8.6e-19 Score=105.30 Aligned_cols=59 Identities=12% Similarity=0.130 Sum_probs=54.1
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+.+.|.+++++++++ .+.|+++|+++. +++|+|+++||+++|++|
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~---~~~~~v~~~PT~~~fk~G 83 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC---IQHYHDNCLPTIFVYKNG 83 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT---STTCCGGGCSEEEEEETT
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh---HHHCCCCCCCEEEEEECC
Confidence 79999999999999999999999999986 589999999875 588999999999999886
No 28
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.77 E-value=9.3e-19 Score=102.89 Aligned_cols=64 Identities=17% Similarity=0.335 Sum_probs=53.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+.+.|.++++++.+++ ++.++.+|+++++.+++++++.++||++++++|
T Consensus 23 ~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 86 (111)
T 3gnj_A 23 KACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDG 86 (111)
T ss_dssp CCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred CEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEEEEECC
Confidence 3689999999999999999999999999986 688888888877777777777777777776553
No 29
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.7e-18 Score=105.87 Aligned_cols=65 Identities=43% Similarity=0.722 Sum_probs=52.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCc-ceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNH-KVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+||++||++|+++.|.++++++.+++.. .+.++.+|++++.+++++|++..+||++++++
T Consensus 35 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 100 (140)
T 2dj1_A 35 DTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKK 100 (140)
T ss_dssp SEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEET
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEEC
Confidence 378999999999999999999999999997642 37777777777777777777777777776655
No 30
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.77 E-value=9.2e-19 Score=103.27 Aligned_cols=63 Identities=22% Similarity=0.396 Sum_probs=52.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++++.+++++++++++||++++++|
T Consensus 25 k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 87 (109)
T 3f3q_A 25 KLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNG 87 (109)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCccCEEEEEECC
Confidence 368999999999999999999999999986 478888888877777777777777777777653
No 31
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.77 E-value=4.2e-18 Score=118.60 Aligned_cols=111 Identities=18% Similarity=0.348 Sum_probs=94.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC--CcccccccCCccc--cceEEEcCce-----------
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT--EHGPLCKEYDIKG--YPTFHHLALT----------- 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~--~Pt~~~~~~~----------- 66 (116)
++++.||++||++|+++.|.++++++.+++ ++.++.+|++ ++..+++.|+++. +|++++++.+
T Consensus 137 ~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~ 214 (361)
T 3uem_A 137 THILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESE 214 (361)
T ss_dssp EEEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSC
T ss_pred cEEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCcc
Confidence 468999999999999999999999999998 7999999999 6889999999987 9999988752
Q ss_pred ---------------------------------------------------------eee--------------------
Q psy3452 67 ---------------------------------------------------------IMI-------------------- 69 (116)
Q Consensus 67 ---------------------------------------------------------v~f-------------------- 69 (116)
+.|
T Consensus 215 ~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~ 294 (361)
T 3uem_A 215 ELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGE 294 (361)
T ss_dssp CCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHH
Confidence 111
Q ss_pred -----ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 70 -----IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 70 -----~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
..+.++.+|+..+. +++|+|+++||+++|++|+......|.|..+
T Consensus 295 ~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~ 344 (361)
T 3uem_A 295 TYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERT 344 (361)
T ss_dssp HTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSS
T ss_pred HhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCC
Confidence 24889999988776 6899999999999997774445788999764
No 32
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.76 E-value=1.6e-18 Score=101.00 Aligned_cols=64 Identities=20% Similarity=0.355 Sum_probs=53.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++++++++++++++||++++++|
T Consensus 20 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 83 (106)
T 3die_A 20 GVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIVFKDG 83 (106)
T ss_dssp SEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEEEeCC
Confidence 3789999999999999999999999999986 588888888877777777777777777776653
No 33
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.76 E-value=1.3e-18 Score=102.04 Aligned_cols=63 Identities=17% Similarity=0.376 Sum_probs=53.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ ++.++.+|++++++++++++++++||++++++|
T Consensus 22 ~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 84 (107)
T 1gh2_A 22 RLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQFFRNK 84 (107)
T ss_dssp SCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEEEEECC
Confidence 368999999999999999999999999984 588888888888878888888888887777654
No 34
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=2e-18 Score=102.18 Aligned_cols=64 Identities=23% Similarity=0.336 Sum_probs=57.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ ++.++.+|+++++++++++++.++||++++++|
T Consensus 18 ~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 81 (112)
T 2voc_A 18 GVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVLKDG 81 (112)
T ss_dssp SEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 3789999999999999999999999999986 689999999988888888888888888887653
No 35
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.76 E-value=1.8e-18 Score=103.48 Aligned_cols=63 Identities=30% Similarity=0.653 Sum_probs=56.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++++++++++++++||+++++++
T Consensus 23 ~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 85 (122)
T 3aps_A 23 HWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYE 85 (122)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEE
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCC
Confidence 689999999999999999999999999987 689999999988888888888888888888654
No 36
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.7e-18 Score=102.78 Aligned_cols=64 Identities=33% Similarity=0.484 Sum_probs=52.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.++|+||++||++|+++.|.++++++.+++. .+.++.+|++++.+++++|+++++||++++++|
T Consensus 24 ~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 87 (126)
T 1x5e_A 24 DWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQPGLSGRFIINALPTIYHCKDG 87 (126)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCHHHHHHcCCcccCEEEEEeCC
Confidence 3799999999999999999999999998752 478888888877777777777777777777553
No 37
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.76 E-value=2.9e-18 Score=100.36 Aligned_cols=63 Identities=22% Similarity=0.386 Sum_probs=53.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++
T Consensus 21 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 83 (108)
T 2trx_A 21 GAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKN 83 (108)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEEEEET
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEEEEeC
Confidence 3789999999999999999999999999976 68888888888777777777777777777654
No 38
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.76 E-value=2.6e-18 Score=96.55 Aligned_cols=60 Identities=30% Similarity=0.355 Sum_probs=54.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|++++.||++||++|+++.|.++++++.+++ ++.+..+|+++++++++++++.++||+++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI 62 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE
Confidence 6789999999999999999999999999986 68999999988888888888888888887
No 39
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.75 E-value=4.1e-18 Score=103.33 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=55.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 41 k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 104 (128)
T 2o8v_B 41 GAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNG 104 (128)
T ss_dssp SEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEEEEeCC
Confidence 3789999999999999999999999999986 688999988888888888888888888877553
No 40
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.75 E-value=2.1e-18 Score=105.57 Aligned_cols=62 Identities=19% Similarity=0.398 Sum_probs=49.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
.+++|+||++||++|+.+.|.++++++.+++ .+.++.+|++.+.+++++|++.++||+++++
T Consensus 52 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 113 (141)
T 3hxs_A 52 KPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPELARDFGIQSIPTIWFVP 113 (141)
T ss_dssp SCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHHHHHcCCCCcCEEEEEe
Confidence 3689999999999999999999999999986 5777777777766666666666666666653
No 41
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=1.5e-18 Score=104.85 Aligned_cols=61 Identities=36% Similarity=0.770 Sum_probs=42.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHL 63 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 63 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++.+++++++++++||++++
T Consensus 36 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 96 (130)
T 2dml_A 36 GLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTIKIF 96 (130)
T ss_dssp SCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEEEEE
T ss_pred CeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEEEEE
Confidence 3689999999999999999999999999876 466656555544444433333333333333
No 42
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=2.1e-18 Score=104.45 Aligned_cols=66 Identities=38% Similarity=0.697 Sum_probs=53.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhcc--CcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKD--NHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.+.++.+|++.+.+++++|+++++||++++++|
T Consensus 26 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 93 (133)
T 1x5d_A 26 DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKG 93 (133)
T ss_dssp SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCC
Confidence 3789999999999999999999999999872 01588888888877777777777777777777663
No 43
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.75 E-value=2.5e-18 Score=107.48 Aligned_cols=64 Identities=30% Similarity=0.548 Sum_probs=55.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+.+.|.++++++.+++ ++.++++|++++++++++|+++++||++++++|
T Consensus 65 ~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G 128 (155)
T 2ppt_A 65 LPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKG 128 (155)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCC
Confidence 3689999999999999999999999999987 688888888888888888888888888777654
No 44
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.75 E-value=3.3e-18 Score=100.05 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=52.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 22 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 85 (109)
T 3tco_A 22 KLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTLIFVNG 85 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEEEEcCC
Confidence 3689999999999999999999999999987 577888887777777777777777777666543
No 45
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.6e-18 Score=105.91 Aligned_cols=53 Identities=11% Similarity=0.273 Sum_probs=44.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCcc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIK 55 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~ 55 (116)
+++|+|||+||++|+++.|.++++++.+++. ++.++.+|++++++++++|++.
T Consensus 28 ~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~ 80 (137)
T 2dj0_A 28 TWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYTDVSTRYKVS 80 (137)
T ss_dssp CEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCHHHHHHTTCC
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCHHHHHHccCc
Confidence 6899999999999999999999999999743 4777777777777776666665
No 46
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.75 E-value=3.3e-18 Score=100.85 Aligned_cols=64 Identities=19% Similarity=0.349 Sum_probs=54.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 24 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 87 (112)
T 1t00_A 24 KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGG 87 (112)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCC
Confidence 3689999999999999999999999999976 588888888888777777777777777776653
No 47
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.75 E-value=1.4e-18 Score=117.63 Aligned_cols=64 Identities=17% Similarity=0.300 Sum_probs=58.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+|+|+||++||++|+.+.|.++++++.+++ ++.++++|++++++++++|+|+++||++++++|
T Consensus 27 ~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 90 (287)
T 3qou_A 27 TPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNG 90 (287)
T ss_dssp SCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCeEEEEECC
Confidence 3789999999999999999999999999987 689999999999888889999999988888764
No 48
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.75 E-value=3.3e-18 Score=99.69 Aligned_cols=63 Identities=24% Similarity=0.365 Sum_probs=53.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 19 ~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 19 PVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 689999999999999999999999999876 588888888888777777777777777777553
No 49
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.75 E-value=2.2e-18 Score=105.84 Aligned_cols=63 Identities=25% Similarity=0.551 Sum_probs=58.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 26 ~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 88 (140)
T 3hz4_A 26 PVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTFKFFCHG 88 (140)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEEEEEETT
T ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCC
Confidence 689999999999999999999999999987 699999999999999999999999999988764
No 50
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.75 E-value=1.3e-17 Score=111.20 Aligned_cols=108 Identities=13% Similarity=0.134 Sum_probs=89.1
Q ss_pred eEEEEEEcCC--CHHHHhhhHHHHHHHHHhcc-Ccc--eEEEEEeCCCcccccccCCccccceEEEcCce----------
Q psy3452 2 FYSILFYSPG--CGYCKKAKPEYVKAAEVLKD-NHK--VALAAIDCTEHGPLCKEYDIKGYPTFHHLALT---------- 66 (116)
Q Consensus 2 ~v~v~F~a~w--C~~C~~~~~~~~~~~~~~~~-~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~---------- 66 (116)
+++|.||++| |++|+.+.+.++++++.++. +++ +.++.+|++++++++++|+|+++||++++++.
T Consensus 27 pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~~g~~~~~G~~~~~ 106 (243)
T 2hls_A 27 PVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFLGGEVRWTGIPAGE 106 (243)
T ss_dssp CEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEETTTTEEEESCCCTT
T ss_pred CEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEECCceeEcCCCcHH
Confidence 6899999999 99999999999999988531 113 99999999999999999999999999998432
Q ss_pred ------------------------------------eee---------------------c------eeeEEEEeccCcc
Q psy3452 67 ------------------------------------IMI---------------------I------RLALAAIDCTEHG 83 (116)
Q Consensus 67 ------------------------------------v~f---------------------~------~~~~~~v~~~~~~ 83 (116)
+.| . ++.+..+|++.+.
T Consensus 107 ~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~ 186 (243)
T 2hls_A 107 EIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP 186 (243)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH
T ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH
Confidence 112 1 4788899999999
Q ss_pred chhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 84 PLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 84 ~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
+++++|+|+++||+++ +|+. .|.|..
T Consensus 187 ~~~~~~~V~~vPt~~i--~G~~----~~~G~~ 212 (243)
T 2hls_A 187 DIADKYGVMSVPSIAI--NGYL----VFVGVP 212 (243)
T ss_dssp HHHHHTTCCSSSEEEE--TTEE----EEESCC
T ss_pred HHHHHcCCeeeCeEEE--CCEE----EEeCCC
Confidence 9999999999999998 5542 266654
No 51
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.75 E-value=1.2e-17 Score=99.70 Aligned_cols=75 Identities=28% Similarity=0.558 Sum_probs=55.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccC---cceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDN---HKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
.+++|+||++||++|+++.|.++++++.+++. ..+.++.+|++++
T Consensus 26 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------------------- 73 (121)
T 2djj_A 26 KDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-------------------------------- 73 (121)
T ss_dssp SCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS--------------------------------
T ss_pred CCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc--------------------------------
Confidence 36899999999999999999999999999752 1355555555433
Q ss_pred eccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 78 DCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
. +++ +|+++||+++|++|+++....|.|..
T Consensus 74 -----~-~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~ 103 (121)
T 2djj_A 74 -----D-VPD--EIQGFPTIKLYPAGAKGQPVTYSGSR 103 (121)
T ss_dssp -----C-CSS--CCSSSSEEEEECSSCTTSCCCCCCCS
T ss_pred -----c-ccc--ccCcCCeEEEEeCcCCCCceEecCCC
Confidence 2 333 88889999888887664346677754
No 52
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.74 E-value=1.9e-18 Score=97.15 Aligned_cols=60 Identities=25% Similarity=0.372 Sum_probs=54.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+.++.||++||++|+++.|.++++++.+++ ++.+..+|+++++++++++++.++||+++
T Consensus 2 m~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 61 (85)
T 1nho_A 2 VVNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI 61 (85)
T ss_dssp CCCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE
T ss_pred eEEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE
Confidence 6789999999999999999999999999986 68899999998888888888888888887
No 53
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.74 E-value=7.3e-18 Score=121.06 Aligned_cols=84 Identities=26% Similarity=0.464 Sum_probs=65.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEeccC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCTE 81 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~~ 81 (116)
+++|+|||+||++|+++.|.++++++.+++... +... +.+.++.+|++.
T Consensus 44 ~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g-----------~~~~--------------------~~v~f~~VD~d~ 92 (470)
T 3qcp_A 44 PWIVLFYNDGCGACRRYASTFSKFAGGLKVEHG-----------KDAL--------------------QIATAAAVNCAS 92 (470)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSC-----------SSGG--------------------GGCEEEEEETTT
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcc-----------cccC--------------------ceEEEEEEECCC
Confidence 689999999999999999999999999874210 0000 135667778787
Q ss_pred ccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
+.+++++|+|+++||+++|++|+......|.|..+
T Consensus 93 ~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~ 127 (470)
T 3qcp_A 93 EVDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSS 127 (470)
T ss_dssp CHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCC
T ss_pred CHHHHHHcCCCccCeEEEEECCCceEEEEeeCCCC
Confidence 88889999999999999997776656778888653
No 54
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.74 E-value=4.2e-18 Score=99.53 Aligned_cols=64 Identities=25% Similarity=0.405 Sum_probs=51.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 20 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 83 (107)
T 1dby_A 20 VPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVFKGG 83 (107)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEESSS
T ss_pred CcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCC
Confidence 3689999999999999999999999999876 577888887777777777777777776666543
No 55
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=3.4e-18 Score=100.66 Aligned_cols=64 Identities=22% Similarity=0.322 Sum_probs=54.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++.+++++|++.++||++++++|
T Consensus 25 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 88 (112)
T 1ep7_A 25 KPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDG 88 (112)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCcccEEEEEECC
Confidence 3689999999999999999999999999976 688888888888877888888888887777653
No 56
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.74 E-value=3.9e-18 Score=105.39 Aligned_cols=64 Identities=22% Similarity=0.421 Sum_probs=52.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+.+ .+.++.+|++++++++++|++.++||++++++|
T Consensus 56 k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 119 (148)
T 3p2a_A 56 LPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNG 119 (148)
T ss_dssp SCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEEEEEECC
Confidence 3689999999999999999999999999976 577878877777777767776666666666543
No 57
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.74 E-value=8.3e-18 Score=121.71 Aligned_cols=76 Identities=39% Similarity=0.758 Sum_probs=54.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEeccC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCTE 81 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~~ 81 (116)
+++|+|||+||++|+++.|.|+++++.+++. .+.+ +.+||+.
T Consensus 33 ~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-~v~~-------------------------------------~~vd~~~ 74 (504)
T 2b5e_A 33 LVLAEFFAPWCGHCKNMAPEYVKAAETLVEK-NITL-------------------------------------AQIDCTE 74 (504)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-TCEE-------------------------------------EEEETTT
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhccC-CeEE-------------------------------------EEEECCC
Confidence 6899999999999999999999999999763 2444 4555555
Q ss_pred ccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
+.+++++|+|+++||+++|++|+......|.|..
T Consensus 75 ~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~ 108 (504)
T 2b5e_A 75 NQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPR 108 (504)
T ss_dssp CHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCC
T ss_pred CHHHHHhcCCCcCCEEEEEeCCccccceeecCCC
Confidence 5566666666777777777665532235566654
No 58
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.74 E-value=8.8e-18 Score=97.98 Aligned_cols=63 Identities=19% Similarity=0.363 Sum_probs=52.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++
T Consensus 21 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 83 (107)
T 2i4a_A 21 GLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLMLVRD 83 (107)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEEEEeC
Confidence 3789999999999999999999999999976 68888888877777777777777777776654
No 59
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.74 E-value=6.5e-18 Score=103.17 Aligned_cols=60 Identities=20% Similarity=0.406 Sum_probs=53.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHL 63 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 63 (116)
+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++.+++++|++.++||++++
T Consensus 40 ~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 99 (136)
T 2l5l_A 40 PAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELAGAFGIRSIPSILFI 99 (136)
T ss_dssp CEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHHHHcCCCCCCEEEEE
Confidence 689999999999999999999999999976 688888888888888888888888888877
No 60
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.74 E-value=5.9e-18 Score=98.50 Aligned_cols=63 Identities=24% Similarity=0.437 Sum_probs=52.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ +.++.+|+++++++++++++.++||++++++|
T Consensus 21 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 3689999999999999999999999999863 78888888777777777777777777776553
No 61
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.9e-18 Score=100.60 Aligned_cols=65 Identities=17% Similarity=0.304 Sum_probs=50.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+... .+.++.+|+++++++++++++.++||++++++|
T Consensus 22 ~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 86 (112)
T 3d6i_A 22 KLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENSEISELFEISAVPYFIIIHKG 86 (112)
T ss_dssp CCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCHHHHHHcCCCcccEEEEEECC
Confidence 36899999999999999999999999986332 478888888877777777777777777766553
No 62
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.73 E-value=5.8e-18 Score=102.33 Aligned_cols=63 Identities=21% Similarity=0.304 Sum_probs=54.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++++++++++|++.++||++++++|
T Consensus 38 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G 100 (125)
T 1r26_A 38 ILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFIIARSG 100 (125)
T ss_dssp SCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 368999999999999999999999999984 588899998888888888888888888877654
No 63
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.73 E-value=8e-18 Score=100.11 Aligned_cols=63 Identities=29% Similarity=0.410 Sum_probs=53.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ +.++.+|+++++++++++++.++||++++++|
T Consensus 31 k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 93 (114)
T 2oe3_A 31 DKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFVLGKDG 93 (114)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEEEEeCC
Confidence 3789999999999999999999999999864 88888888888777777777777777776553
No 64
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.73 E-value=7.3e-18 Score=100.76 Aligned_cols=63 Identities=27% Similarity=0.405 Sum_probs=53.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+||++||++|+++.|.++++++.+++ .+.++.+|++++.+++++|++.++||++++++|
T Consensus 33 ~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 95 (119)
T 1w4v_A 33 PVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNG 95 (119)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSSEEEEEETT
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCcccEEEEEeCC
Confidence 689999999999999999999999999876 588888888887777777777777777777543
No 65
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.73 E-value=9.6e-18 Score=110.20 Aligned_cols=64 Identities=22% Similarity=0.374 Sum_probs=60.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+.+.|.++++++.+++ .+.++.+|++.++.++++|++.++||++++++|
T Consensus 31 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 94 (222)
T 3dxb_A 31 GAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNG 94 (222)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSBSEEEEEETT
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcCCEEEEEECC
Confidence 3689999999999999999999999999987 699999999999999999999999999999875
No 66
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=7.2e-18 Score=99.36 Aligned_cols=63 Identities=32% Similarity=0.468 Sum_probs=50.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC-CcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT-EHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++ ++.+++++++++++||++++++|
T Consensus 25 ~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G 88 (111)
T 2pu9_C 25 KPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVPTFKILKEN 88 (111)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSBSSEEEEESSS
T ss_pred CEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcchHHHHHHcCCCeeeEEEEEeCC
Confidence 368999999999999999999999999986 3788888887 56666666677666766666553
No 67
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.73 E-value=9.6e-18 Score=101.12 Aligned_cols=63 Identities=24% Similarity=0.430 Sum_probs=55.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++++.+++++|++.++||++++++|
T Consensus 39 k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 101 (124)
T 1xfl_A 39 TLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQAMPTFMFLKEG 101 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCCccCEEEEEECC
Confidence 378999999999999999999999999986 588999999888888888888888888877654
No 68
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.73 E-value=8.2e-18 Score=100.56 Aligned_cols=61 Identities=18% Similarity=0.410 Sum_probs=56.1
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++|+||++||++|+.+.|.++++++.+ + .+.++.+|++++.+++++|++.++||++++++
T Consensus 25 ~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 25 LVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 6899999999999999999999999998 3 69999999999999999999999999998876
No 69
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=1.2e-17 Score=97.20 Aligned_cols=64 Identities=28% Similarity=0.519 Sum_probs=54.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 21 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 84 (106)
T 1xwb_A 21 KLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFVFLKNG 84 (106)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEEEEcCC
Confidence 3789999999999999999999999999865 688888888888777777777777777777553
No 70
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.73 E-value=1.2e-17 Score=97.14 Aligned_cols=64 Identities=23% Similarity=0.417 Sum_probs=54.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 19 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 82 (105)
T 1fb6_A 19 VPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNG 82 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEEeCC
Confidence 3689999999999999999999999999976 588888888888777777887777877777653
No 71
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.72 E-value=1.6e-17 Score=97.02 Aligned_cols=64 Identities=19% Similarity=0.301 Sum_probs=55.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+.+.|.++++++.+++ ++.++.+|+++++++++++++.++||++++++|
T Consensus 19 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 82 (109)
T 2yzu_A 19 PLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVILFKDG 82 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCC
Confidence 3689999999999999999999999999986 688888888888888888888888888777553
No 72
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.72 E-value=1.3e-17 Score=99.41 Aligned_cols=63 Identities=17% Similarity=0.308 Sum_probs=55.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++.+++++++.++||++++++|
T Consensus 32 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 94 (121)
T 2i1u_A 32 PVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPTLILFKDG 94 (121)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred cEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCEEEEEECC
Confidence 689999999999999999999999999876 688899998888888888888888888877654
No 73
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.72 E-value=2.6e-17 Score=118.37 Aligned_cols=78 Identities=28% Similarity=0.574 Sum_probs=59.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEecc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCT 80 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~ 80 (116)
.+++|+|||+||++|+++.|.++++++.+++...+.++++ |++
T Consensus 371 k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~i-------------------------------------d~~ 413 (481)
T 3f8u_A 371 KDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKM-------------------------------------DAT 413 (481)
T ss_dssp CEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEE-------------------------------------ETT
T ss_pred CcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEE-------------------------------------ECC
Confidence 3789999999999999999999999999986434555444 444
Q ss_pred CccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
.+ +++++|+|+++||+++|++|+++....|.|..+
T Consensus 414 ~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~ 448 (481)
T 3f8u_A 414 AN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRE 448 (481)
T ss_dssp SS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSCCS
T ss_pred ch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCC
Confidence 44 455677788888888887777655677777653
No 74
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.72 E-value=9.9e-18 Score=104.34 Aligned_cols=63 Identities=17% Similarity=0.378 Sum_probs=58.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++++++++++|+++++||++++++|
T Consensus 33 ~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 95 (153)
T 2wz9_A 33 SLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNS 95 (153)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCCEEEEEECC
Confidence 368999999999999999999999999984 699999999999999999999999999999865
No 75
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.72 E-value=1.3e-17 Score=98.45 Aligned_cols=63 Identities=19% Similarity=0.406 Sum_probs=53.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|.||++||++|+++.|.++++++.+++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 27 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 89 (115)
T 1thx_A 27 PVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGE 89 (115)
T ss_dssp CEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEEEEcCC
Confidence 689999999999999999999999999986 588888888888777777777777777777553
No 76
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.72 E-value=1.3e-17 Score=99.62 Aligned_cols=63 Identities=21% Similarity=0.474 Sum_probs=52.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+++ +.++.+|++++++++++|++.++||++++++|
T Consensus 35 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 97 (122)
T 2vlu_A 35 KLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAMPTFLFMKEG 97 (122)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 3689999999999999999999999998873 78888888887777777777777777776553
No 77
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.72 E-value=3e-17 Score=100.04 Aligned_cols=79 Identities=16% Similarity=0.223 Sum_probs=60.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
.+++|+||++||++|+++.|.+ .++.+.++ .+.++.+|++...
T Consensus 32 k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~------------------------------- 77 (134)
T 2fwh_A 32 KPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTAND------------------------------- 77 (134)
T ss_dssp SCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCC-------------------------------
T ss_pred CcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCc-------------------------------
Confidence 3689999999999999999999 88888886 3778888776532
Q ss_pred eccCccchhhhcCCCCCCEEEEe-cCCcccCCcCCCCCC
Q psy3452 78 DCTEHGPLCKEYDIKGYPTFQYF-HYFNKQSPSPYHNDY 115 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~~~y~g~~ 115 (116)
+.+.+++++|+|.++||++++ ++|+.+....+.|..
T Consensus 78 --~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~ 114 (134)
T 2fwh_A 78 --AQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFM 114 (134)
T ss_dssp --HHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCC
T ss_pred --chHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeecc
Confidence 335678889999999999999 444442224566653
No 78
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.71 E-value=1.4e-17 Score=100.20 Aligned_cols=62 Identities=21% Similarity=0.269 Sum_probs=54.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEe--CCCcccccccCCccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAID--CTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd--~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+| ++++.+++++|++.++||+++++
T Consensus 27 k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~ 90 (126)
T 2l57_A 27 IPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLD 90 (126)
T ss_dssp SCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEEC
T ss_pred CcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEEC
Confidence 3689999999999999999999999999974 68899999 77777888888888888888877
No 79
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.71 E-value=2.1e-17 Score=97.64 Aligned_cols=63 Identities=22% Similarity=0.443 Sum_probs=53.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 27 k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 89 (112)
T 1syr_A 27 ELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPTFKVYKNG 89 (112)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccEEEEEECC
Confidence 378999999999999999999999999886 488888888888878888888888887777654
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.71 E-value=1.2e-17 Score=99.57 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=55.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEeccC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCTE 81 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~~ 81 (116)
+++|+||++||++|+++.|.++++++.++. .+.+ +|++... +.+.
T Consensus 31 ~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~--~~~~~~~-------------------------------~~~~ 75 (118)
T 1zma_A 31 TATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYF--INSEEPS-------------------------------QLND 75 (118)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEE--EETTCGG-------------------------------GHHH
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEE--EECCCcC-------------------------------cHHH
Confidence 689999999999999999999999998753 3333 3443321 1133
Q ss_pred ccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
..+++++|+|+++||++++++|+.+ ..+.|..
T Consensus 76 ~~~~~~~~~i~~~Pt~~~~~~G~~~--~~~~G~~ 107 (118)
T 1zma_A 76 LQAFRSRYGIPTVPGFVHITDGQIN--VRCDSSM 107 (118)
T ss_dssp HHHHHHHHTCCSSCEEEEEETTEEE--EECCTTC
T ss_pred HHHHHHHcCCCCCCeEEEEECCEEE--EEecCCC
Confidence 4567888999999999888877654 4455543
No 81
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.71 E-value=1.8e-17 Score=101.32 Aligned_cols=63 Identities=24% Similarity=0.380 Sum_probs=56.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++++.+++++|++.++||++++++|
T Consensus 47 k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 109 (139)
T 3d22_A 47 KIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKATPTFFFLRDG 109 (139)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCEESEEEEEETT
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCcccEEEEEcCC
Confidence 368999999999999999999999999985 589999999999999999999999999888664
No 82
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.71 E-value=2.1e-17 Score=107.63 Aligned_cols=62 Identities=24% Similarity=0.659 Sum_probs=45.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
.+++|+||++||++|+++.|.++++++.+++ .+.++.+|+++++.+++++++.++||+++++
T Consensus 115 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 176 (210)
T 3apq_A 115 ELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSLFIFR 176 (210)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEEEC
T ss_pred CcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeEEEEE
Confidence 3689999999999999999999999999976 5666666665555444444444444444443
No 83
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.71 E-value=8.3e-18 Score=99.29 Aligned_cols=61 Identities=21% Similarity=0.269 Sum_probs=49.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++|+||++||++|+++.|.++++++.++ .+.++.+|++++++++++++++++||++++++
T Consensus 21 ~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 21 DAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp EEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred CEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 68999999999999999999999988875 47777777777777777777777777776654
No 84
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.71 E-value=1.7e-17 Score=99.50 Aligned_cols=62 Identities=34% Similarity=0.534 Sum_probs=49.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC-CcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT-EHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+||++||++|+++.|.++++++.++ .+.++.+|++ ++.+++++++++++||++++++
T Consensus 38 ~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~ 100 (124)
T 1faa_A 38 KPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVPTFKILKE 100 (124)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSSEEEEEET
T ss_pred CEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeeeEEEEEeC
Confidence 368999999999999999999999999886 3778888876 4566666666666666666554
No 85
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=1.7e-17 Score=98.70 Aligned_cols=62 Identities=21% Similarity=0.452 Sum_probs=52.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||++|+++.|.++++++.+ .+.++.+|+++++++++++++.++||++++++|
T Consensus 34 ~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 95 (117)
T 2xc2_A 34 KLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTFIAIKNG 95 (117)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceEEEEeCC
Confidence 36899999999999999999999998877 478888888888877778888888887777653
No 86
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=4.1e-17 Score=99.76 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=53.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+.+.|.++++++.++ .+.++++|+++.. ++|+|..+||+++|++|
T Consensus 32 ~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G 90 (135)
T 2dbc_A 32 WVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI---EHYHDNCLPTIFVYKNG 90 (135)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC---SSCCSSCCSEEEEESSS
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc---ccCCCCCCCEEEEEECC
Confidence 79999999999999999999999999985 5899999998875 68899999999998875
No 87
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.71 E-value=1.8e-17 Score=100.55 Aligned_cols=61 Identities=16% Similarity=0.280 Sum_probs=45.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHH--HHHHHhccCcceEEEEEeC---CCcccccccCCc---cccceEEEc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYV--KAAEVLKDNHKVALAAIDC---TEHGPLCKEYDI---KGYPTFHHL 63 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~--~~~~~~~~~~~~~~~~vd~---~~~~~~~~~~~v---~~~Pt~~~~ 63 (116)
.+++|+||++||++|+.+.|.++ ++.+.+++ .+.++.+|+ +++.+++++|++ .++||++++
T Consensus 30 k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~ 98 (133)
T 3fk8_A 30 KPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVV 98 (133)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEE
T ss_pred CcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEE
Confidence 47899999999999999999999 99998865 688888887 444444444444 444444444
No 88
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.70 E-value=3.1e-17 Score=95.17 Aligned_cols=63 Identities=21% Similarity=0.455 Sum_probs=53.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.++ ++.++.+|+++++++++++++.++||++++++|
T Consensus 20 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 82 (104)
T 2vim_A 20 RLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDG 82 (104)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEEEeCC
Confidence 368999999999999999999999999886 588888888888877888888888887777654
No 89
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.70 E-value=3.8e-18 Score=104.23 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=50.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEeccC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCTE 81 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~~ 81 (116)
+++|+|||+||++|+++.|.++++++.++ +.++.+|++..... ...+.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~----------------------------~~~d~ 80 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGE----------------------------RELSA 80 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCH----------------------------HHHHH
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhh----------------------------hhhhh
Confidence 48999999999999999999999998874 77788887433210 01134
Q ss_pred ccchhhhcCCCCCCEEEEecCCcc
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
+.+++++|+|+++||++++++|+.
T Consensus 81 ~~~l~~~~~v~~~Pt~~~~~~G~~ 104 (135)
T 3emx_A 81 ARLEMNKAGVEGTPTLVFYKEGRI 104 (135)
T ss_dssp HHHHHHHHTCCSSSEEEEEETTEE
T ss_pred hHHHHHHcCCceeCeEEEEcCCEE
Confidence 455666666666666666665543
No 90
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.70 E-value=1.5e-17 Score=101.48 Aligned_cols=60 Identities=28% Similarity=0.343 Sum_probs=53.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
.+++|+||++||++|+++.|.++++++.+ .+.++.+|++++.+++++|+++++||+++++
T Consensus 41 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 100 (133)
T 3cxg_A 41 SSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKALPTFEFYF 100 (133)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCCCEEEEEE
Confidence 37899999999999999999999987766 4889999999888888888888888888883
No 91
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.70 E-value=1.5e-17 Score=105.36 Aligned_cols=62 Identities=13% Similarity=0.030 Sum_probs=54.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCC---ccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYD---IKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~---v~~~Pt~~~~~~~ 66 (116)
+++|+|||+||++|+.+.|.++++++.++ ++.+..+|.+++++++++|. +.++||+++++++
T Consensus 56 ~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 56 YRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEE 120 (167)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTT
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCC
Confidence 68999999999999999999999998875 58899999998888888886 8888888888763
No 92
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.70 E-value=4.2e-17 Score=96.68 Aligned_cols=63 Identities=21% Similarity=0.406 Sum_probs=55.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 29 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 91 (118)
T 2vm1_A 29 KLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAMPTFLFIKDG 91 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSBSEEEEEETT
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcCcEEEEEeCC
Confidence 368999999999999999999999999986 588899999888888888888888888887664
No 93
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.70 E-value=5.3e-17 Score=93.91 Aligned_cols=62 Identities=18% Similarity=0.299 Sum_probs=51.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|.||++||++|+++.|.++++++.+++ +.++.+|+++++++++++++.++||++++++
T Consensus 17 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 17 EIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 3689999999999999999999999998874 7888888877777777777777777776654
No 94
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.69 E-value=5.9e-17 Score=99.20 Aligned_cols=62 Identities=21% Similarity=0.436 Sum_probs=53.3
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
++|+||++||++|+.+.|.++++++.+++ ++.++.+|++++.+++++|++.++||++++++|
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 114 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRG 114 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEEEEeCC
Confidence 78999999999999999999999999986 688888888888777777777777777777654
No 95
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=9.4e-17 Score=99.24 Aligned_cols=97 Identities=15% Similarity=0.212 Sum_probs=71.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
.+++|+||++||++|+.+.|.++++.+++++. .+.++.++++..+.+ ++++++. +|.+ ..
T Consensus 25 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~-~~~~---------------~~ 87 (151)
T 3raz_A 25 PVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALDTSDNIGNFLKQTPVS-YPIW---------------RY 87 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESSCHHHHHHHHHHSCCS-SCEE---------------EE
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCChHHHHHHHHHcCCC-CceE---------------ec
Confidence 47899999999999999999999999999654 599999999866543 3444442 3311 12
Q ss_pred eccCccchhhhcC--CCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 78 DCTEHGPLCKEYD--IKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 78 ~~~~~~~~~~~~~--v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
+.....++.+.|+ +.++|+++++++++++ ...+.|..
T Consensus 88 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~~g~~ 126 (151)
T 3raz_A 88 TGANSRNFMKTYGNTVGVLPFTVVEAPKCGY-RQTITGEV 126 (151)
T ss_dssp CCSCHHHHHHTTTCCSCCSSEEEEEETTTTE-EEECCSCC
T ss_pred CccchHHHHHHhCCccCCCCEEEEECCCCcE-EEEECCCC
Confidence 2345677899999 9999999999655443 24455653
No 96
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.69 E-value=1.7e-17 Score=99.95 Aligned_cols=64 Identities=22% Similarity=0.374 Sum_probs=48.5
Q ss_pred CeEEEEEEcCCCH--------------HHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCG--------------YCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~--------------~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|+||++||+ +|+++.|.++++++.+++ ++.++++|++++++++++|+++++||++++++|
T Consensus 22 k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 99 (123)
T 1oaz_A 22 GAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNG 99 (123)
T ss_dssp SEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTTTGGGGTCCBSSEEEEEESS
T ss_pred CeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEEEEECC
Confidence 3789999999999 999999999999998876 588888888888777777777777777777553
No 97
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.68 E-value=5.2e-17 Score=95.59 Aligned_cols=63 Identities=22% Similarity=0.414 Sum_probs=54.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.++ .+.++.+|+++++++++++++.++||++++++|
T Consensus 27 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 89 (113)
T 1ti3_A 27 KLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDG 89 (113)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSSTTEEEEEETT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcccEEEEEeCC
Confidence 368999999999999999999999999986 588888888888888888888888888777654
No 98
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.68 E-value=2.4e-17 Score=98.78 Aligned_cols=65 Identities=26% Similarity=0.474 Sum_probs=52.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.+++|.||++||++|+++.|.++++++.+++. .+.++.+|+++++++++++++.++||++++++|
T Consensus 34 k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G 98 (121)
T 2j23_A 34 KVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNG 98 (121)
T ss_dssp SCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSEEEEEETT
T ss_pred CEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccEEEEEECC
Confidence 36899999999999999999999999888752 278888888777777777777777777766553
No 99
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.68 E-value=1.5e-16 Score=97.35 Aligned_cols=88 Identities=14% Similarity=0.188 Sum_probs=65.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHH---HHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceee
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVK---AAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLA 73 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~---~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~ 73 (116)
.+++|+||++||++|++++|.+.+ +.+.+++. .+.++.++.+.+.+.. ++++.. +|
T Consensus 32 k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~-~~--------------- 94 (142)
T 3eur_A 32 EYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKE-WT--------------- 94 (142)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTT-SE---------------
T ss_pred CEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhcccc-cc---------------
Confidence 478999999999999999999999 99999764 5899999988775433 333331 12
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
...+......+.+.|+|.++||++++++++++
T Consensus 95 -~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i 126 (142)
T 3eur_A 95 -NGYDKELVIKNKNLYDLRAIPTLYLLDKNKTV 126 (142)
T ss_dssp -EEECTTCHHHHTTCSCCTTCSEEEEECTTCBE
T ss_pred -cccCccchhhhhhhcCCCcCCeEEEECCCCcE
Confidence 12233333347889999999999999766654
No 100
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.68 E-value=9.9e-17 Score=96.46 Aligned_cols=63 Identities=13% Similarity=0.203 Sum_probs=47.4
Q ss_pred CeEEEEEEcC-------CCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC-------CcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSP-------GCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT-------EHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~-------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~-------~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+|||+ ||++|+.+.|.++++++.+++ .+.++.+|++ .+..++++++++++||++++++
T Consensus 25 ~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~ 101 (123)
T 1wou_A 25 KTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT 101 (123)
T ss_dssp SEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTS
T ss_pred CEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcC
Confidence 3789999999 999999999999999999876 6889999884 4444444444444444444443
No 101
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.67 E-value=9.6e-17 Score=101.36 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=59.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
++++|+|||+||++|+++.+.+ .++.+.+++ .+.++.+|++++.++.....+... ........
T Consensus 48 k~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~------------~~~~~~~~ 113 (172)
T 3f9u_A 48 KPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMEN------------GTERTLRT 113 (172)
T ss_dssp CCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEET------------TEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhc------------chhhhhhh
Confidence 4799999999999999985554 666666655 699999999988765443222110 00000111
Q ss_pred eccCccch-hhhcCCCCCCEEEEe-cCCcc
Q psy3452 78 DCTEHGPL-CKEYDIKGYPTFQYF-HYFNK 105 (116)
Q Consensus 78 ~~~~~~~~-~~~~~v~~~Pt~~~~-~~g~~ 105 (116)
..+.+..+ .++|+|+++||++++ ++|+.
T Consensus 114 ~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~ 143 (172)
T 3f9u_A 114 VGDKWSYLQRVKFGANAQPFYVLIDNEGNP 143 (172)
T ss_dssp HHHHHHHHHHHHHSCCCSSEEEEECTTSCB
T ss_pred hhhhhhHHHHHHcCCCCcceEEEECCCCCE
Confidence 11122233 588999999999999 45544
No 102
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.67 E-value=5.5e-17 Score=102.14 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=65.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCcc-ccceEEEcCceeeeceeeEEEEec
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIK-GYPTFHHLALTIMIIRLALAAIDC 79 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~~v~~ 79 (116)
.+++|+||++||++|+++.|.++++.+++++...+.++.++++...+..+++--+ .+++ +.....
T Consensus 49 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~--------------~~~~~~ 114 (165)
T 3s9f_A 49 KTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLS--------------IPFANR 114 (165)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEE--------------CCTTCH
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcc--------------cccCch
Confidence 4789999999999999999999999999986446888888888765433322111 1000 000011
Q ss_pred cCccchhhhcCCCCCCEEEEecCC-ccc
Q psy3452 80 TEHGPLCKEYDIKGYPTFQYFHYF-NKQ 106 (116)
Q Consensus 80 ~~~~~~~~~~~v~~~Pt~~~~~~g-~~~ 106 (116)
+...++++.|+|.++||+++++++ +++
T Consensus 115 ~~~~~l~~~~~v~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 115 NIVEALTKKYSVESIPTLIGLNADTGDT 142 (165)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred hHHHHHHHHcCCCCCCEEEEEeCCCCEE
Confidence 233789999999999999999753 443
No 103
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.67 E-value=4.2e-16 Score=93.95 Aligned_cols=91 Identities=13% Similarity=0.339 Sum_probs=69.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|.||++||++|+++.|.++++.+.++ ++.++.++++.+.+ ..+++++..+|.
T Consensus 26 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----------------- 85 (136)
T 1zzo_A 26 KPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ----------------- 85 (136)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE-----------------
T ss_pred CeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE-----------------
Confidence 368999999999999999999999999987 58889999876543 334555433331
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
-.+.+.++++.|+|.++|+++++++++++. .+.|.
T Consensus 86 -~~d~~~~~~~~~~i~~~P~~~~id~~g~i~--~~~g~ 120 (136)
T 1zzo_A 86 -LADTDGSVWANFGVTQQPAYAFVDPHGNVD--VVRGR 120 (136)
T ss_dssp -EECTTCHHHHHTTCCSSSEEEEECTTCCEE--EEESC
T ss_pred -EEcCCcHHHHHcCCCCCceEEEECCCCCEE--EEecC
Confidence 125678899999999999999997655542 45554
No 104
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.66 E-value=7.5e-17 Score=98.89 Aligned_cols=88 Identities=15% Similarity=0.166 Sum_probs=64.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccccc----CCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKE----YDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~----~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+||++||++|+++.|.+.++.+++++...+.++.++++.+.+..++ ++...+| +
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~---------------~-- 91 (144)
T 1i5g_A 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP---------------F-- 91 (144)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECC---------------T--
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccc---------------c--
Confidence 478999999999999999999999999998533688999988865433332 2211111 0
Q ss_pred EeccCccchhhhcCCCCCCEEEEec-CCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~-~g~~ 105 (116)
...+.+.+++++|+|.++||+++++ ++++
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGN 121 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCC
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCc
Confidence 0113457899999999999999997 4444
No 105
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.66 E-value=8.6e-17 Score=98.90 Aligned_cols=88 Identities=11% Similarity=0.184 Sum_probs=64.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccC----CccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEY----DIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~----~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|+||++||++|+++.|.+.++.+++++..++.++.++++.+.+..+++ +...+| +
T Consensus 29 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~---------------~-- 91 (146)
T 1o8x_A 29 KLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVP---------------F-- 91 (146)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECC---------------G--
T ss_pred CEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeec---------------c--
Confidence 4789999999999999999999999999984336888888888654333222 211111 0
Q ss_pred EeccCccchhhhcCCCCCCEEEEec-CCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~-~g~~ 105 (116)
...+.+.+++++|+|.++||+++++ ++++
T Consensus 92 ~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 92 AQSEAVQKLSKHFNVESIPTLIGVDADSGD 121 (146)
T ss_dssp GGHHHHHHHHHHTTCCSSSEEEEEETTTCC
T ss_pred chhhHHHHHHHHhCCCCCCEEEEEECCCCe
Confidence 0113457899999999999999997 4443
No 106
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.65 E-value=1e-16 Score=107.03 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+|+|+|||+||++|+.+.|.|.++++.++ .+.|+++|++. ..++++|++.++||+++|++|
T Consensus 135 ~VvV~Fya~wC~~Ck~l~p~l~~La~~~~---~v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G 195 (245)
T 1a0r_P 135 TIVVHIYEDGIKGCDALNSSLICLAAEYP---MVKFCKIKASN-TGAGDRFSSDVLPTLLVYKGG 195 (245)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHCT---TSEEEEEEHHH-HCCTTSSCTTTCSEEEEEETT
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHCC---CCEEEEEeCCc-HHHHHHCCCCCCCEEEEEECC
Confidence 78999999999999999999999999987 48999999987 678899999999999999875
No 107
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.65 E-value=6e-16 Score=96.43 Aligned_cols=86 Identities=14% Similarity=0.167 Sum_probs=63.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc------cc---cccCCccccceEEEcCceeeece
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG------PL---CKEYDIKGYPTFHHLALTIMIIR 71 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~------~~---~~~~~v~~~Pt~~~~~~~v~f~~ 71 (116)
.+++|+||++||++|+.+.|.++++.++++.. .+.++.++.+... .+ .+.+++..
T Consensus 39 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 102 (164)
T 2h30_A 39 KPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLNYPK--------------- 102 (164)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT---------------
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCCCCc---------------
Confidence 36899999999999999999999999998765 4788888765321 11 11222221
Q ss_pred eeEEEEeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
..++.+.+.+++++|+|.++||+++++++++
T Consensus 103 ---~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 133 (164)
T 2h30_A 103 ---LPVVTDNGGTIAQNLNISVYPSWALIGKDGD 133 (164)
T ss_dssp ---SCEEECTTCHHHHHTTCCSSSEEEEECTTSC
T ss_pred ---ceEEEcCchHHHHHcCCCccceEEEECCCCc
Confidence 2345577889999999999999999954444
No 108
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.65 E-value=1.6e-16 Score=104.67 Aligned_cols=65 Identities=40% Similarity=0.727 Sum_probs=60.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCc-ceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNH-KVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|+||++||++|+++.|.++++++.+.+.. .+.++.+|++++++++++|+|+++||+++|++|
T Consensus 149 ~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 214 (241)
T 3idv_A 149 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG 214 (241)
T ss_dssp EEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECC
Confidence 68999999999999999999999999997642 599999999999999999999999999999875
No 109
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.65 E-value=4.6e-16 Score=112.57 Aligned_cols=77 Identities=29% Similarity=0.492 Sum_probs=57.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhc-cCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEec
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLK-DNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDC 79 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~ 79 (116)
.+++|+|||+||++|+++.|.++++++.++ +...+.+++ +|+
T Consensus 377 k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~-------------------------------------vd~ 419 (504)
T 2b5e_A 377 KDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAK-------------------------------------LDH 419 (504)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEE-------------------------------------EEG
T ss_pred CCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEE-------------------------------------ecC
Confidence 368999999999999999999999999986 322344444 444
Q ss_pred cCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 80 TEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 80 ~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
+.+... + |+|+++||+++|++|++.....|.|..+
T Consensus 420 ~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G~~~ 454 (504)
T 2b5e_A 420 TENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQGSRS 454 (504)
T ss_dssp GGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCSCCC
T ss_pred Cccccc-c-CCceecCeEEEEeCCceecceEecCCCC
Confidence 433333 3 8888999999998876655677888653
No 110
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.64 E-value=2e-16 Score=103.62 Aligned_cols=64 Identities=19% Similarity=0.243 Sum_probs=58.3
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccC--cceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDN--HKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
++|+||++||++|+++.|.++++++.+++. +.+.++.+|++++++++++|+++++||++++++|
T Consensus 137 ~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 202 (226)
T 1a8l_A 137 RILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNG 202 (226)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETT
T ss_pred EEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCC
Confidence 499999999999999999999999999721 2699999999999999999999999999998875
No 111
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.64 E-value=1.5e-16 Score=97.39 Aligned_cols=88 Identities=15% Similarity=0.180 Sum_probs=63.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccC----CccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEY----DIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~----~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+||++||++|+++.|.+.++.+++++...+.++.++++.+.+..+++ +...+| .
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~-----------------~ 91 (144)
T 1o73_A 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALP-----------------F 91 (144)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECC-----------------T
T ss_pred CEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEee-----------------c
Confidence 4789999999999999999999999999984336888888888764332222 111111 0
Q ss_pred EeccCccchhhhcCCCCCCEEEEec-CCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~-~g~~ 105 (116)
...+.+.+++++|+|.++||+++++ ++++
T Consensus 92 ~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 92 DQRSTVSELGKTFGVESIPTLITINADTGA 121 (144)
T ss_dssp TCHHHHHHHHHHHTCCSSSEEEEEETTTCC
T ss_pred cchhHHHHHHHHcCCCCCCEEEEEECCCCe
Confidence 0113466899999999999999998 4444
No 112
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.64 E-value=4.3e-16 Score=94.10 Aligned_cols=88 Identities=15% Similarity=0.333 Sum_probs=67.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+++.|.++++.+.++ .+.++.++++.+.+.. +++++ .+|
T Consensus 25 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~-~~~------------------ 82 (136)
T 1lu4_A 25 KPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNL-NFT------------------ 82 (136)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTC-CSE------------------
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCC-Cce------------------
Confidence 368999999999999999999999999987 5889999988754333 33333 112
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCcccCCcCCC
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYH 112 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~ 112 (116)
+-.+.+.+++++|++.++|+++++++++++. .+.
T Consensus 83 ~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~--~~~ 116 (136)
T 1lu4_A 83 NLNDADGVIWARYNVPWQPAFVFYRADGTST--FVN 116 (136)
T ss_dssp EEECTTSHHHHHTTCCSSSEEEEECTTSCEE--EEC
T ss_pred EEECCchhHHHhcCCCCCCEEEEECCCCcEE--EEE
Confidence 1125678899999999999999996555543 444
No 113
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=7.7e-16 Score=95.52 Aligned_cols=88 Identities=10% Similarity=0.077 Sum_probs=66.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEecc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCT 80 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~ 80 (116)
++++|+||++||++|+...|.+.++.+++++. .+.++.++++...+.++++.. .+| +..+ .+
T Consensus 36 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~-~~~---------------~~~~-~d 97 (152)
T 2lrt_A 36 KVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSAD-NLP---------------WVCV-RD 97 (152)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHT-TCS---------------SEEE-EC
T ss_pred CEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHh-CCC---------------ceEE-EC
Confidence 47899999999999999999999999999875 489999999887765555432 222 1111 13
Q ss_pred Ccc---chhhhcCCCCCCEEEEecCCccc
Q psy3452 81 EHG---PLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 81 ~~~---~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+. .+.+.|++.++|+++++++++++
T Consensus 98 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i 126 (152)
T 2lrt_A 98 ANGAYSSYISLYNVTNLPSVFLVNRNNEL 126 (152)
T ss_dssp SSGGGCHHHHHHTCCSCSEEEEEETTTEE
T ss_pred CCCcchHHHHHcCcccCceEEEECCCCeE
Confidence 333 48999999999999999654443
No 114
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.64 E-value=7e-16 Score=107.36 Aligned_cols=63 Identities=27% Similarity=0.562 Sum_probs=57.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+++|+|||+||++|+++.|.|+++++.+++...+.++.+|++.+. +++++|+++||+++++.
T Consensus 268 k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~ 330 (361)
T 3uem_A 268 KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPA 330 (361)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECS
T ss_pred CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEEC
Confidence 3689999999999999999999999999987656999999999887 78999999999999954
No 115
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.64 E-value=1.7e-16 Score=104.30 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=55.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+|+|+||++||++|+.+.|.++++++.++ .+.++++|++ ++.++++|++.++||+++|++|
T Consensus 122 ~vvV~F~a~wC~~C~~l~p~l~~la~~~~---~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G 182 (217)
T 2trc_P 122 TIVVNIYEDGVRGCDALNSSLECLAAEYP---MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGG 182 (217)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHTTCT---TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETT
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHCC---CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECC
Confidence 79999999999999999999999999985 5899999988 7778888999999999888775
No 116
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.64 E-value=1.3e-15 Score=94.53 Aligned_cols=88 Identities=19% Similarity=0.286 Sum_probs=64.0
Q ss_pred CeEEEEEEcCCCHHHHhh-hHHHHHHHHHhccCcceEEEEEeCCC------c----ccccccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGYCKKA-KPEYVKAAEVLKDNHKVALAAIDCTE------H----GPLCKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~~vd~~~------~----~~~~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++|+++ .|.+.++.+++++. .+.++.++++. . ...++++++. +|.+
T Consensus 29 k~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 97 (158)
T 3eyt_A 29 KVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIK-FPVG--------- 97 (158)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC-SCEE---------
T ss_pred CEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCC-ceEE---------
Confidence 479999999999999996 99999999999865 58888888741 2 2344555554 3311
Q ss_pred ceeeEEEEeccCc---cchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEH---GPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~---~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+.... ..+++.|+|.++|+++++++++++
T Consensus 98 -------~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i 130 (158)
T 3eyt_A 98 -------VDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDL 130 (158)
T ss_dssp -------EECCCSSSSCHHHHHTTCCSSSEEEEECTTSEE
T ss_pred -------EcCccchhhHHHHHHcCCCCCCEEEEECCCCCE
Confidence 222221 168999999999999999655443
No 117
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.63 E-value=1.6e-15 Score=92.40 Aligned_cols=86 Identities=22% Similarity=0.362 Sum_probs=65.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC---cc----cccccCCccccceEEEcCceeeeceee
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE---HG----PLCKEYDIKGYPTFHHLALTIMIIRLA 73 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~----~~~~~~~v~~~Pt~~~~~~~v~f~~~~ 73 (116)
++++|.||++||++|+.+.|.+.++.+.+++. .+.++.++++. .. ...+++++. +|
T Consensus 35 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~-~~--------------- 97 (145)
T 3erw_A 35 QKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLT-FP--------------- 97 (145)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCC-SC---------------
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCc-ee---------------
Confidence 47899999999999999999999999999854 58888888875 22 233344432 22
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+..+++.|+|.++|+++++++++++
T Consensus 98 ---~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 127 (145)
T 3erw_A 98 ---IVLDSKGELMKEYHIITIPTSFLLNEKGEI 127 (145)
T ss_dssp ---EEECSSSHHHHHTTCCEESEEEEECTTCCE
T ss_pred ---EEEcCchhHHHhcCcCccCeEEEEcCCCcE
Confidence 122567889999999999999999554443
No 118
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.63 E-value=7.4e-16 Score=94.95 Aligned_cols=87 Identities=17% Similarity=0.366 Sum_probs=66.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc----cccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL----CKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~----~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|.||++||++|+++.|.+.++.+.+++. .+.++.++++.+.+. .+++++.. ..
T Consensus 31 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~------------------~~ 91 (152)
T 2lja_A 31 KYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKG------------------IQ 91 (152)
T ss_dssp SEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCS------------------EE
T ss_pred CEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCC------------------ce
Confidence 47899999999999999999999999999764 489999998876532 23333322 22
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|+|.++|+++++++++++
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 121 (152)
T 2lja_A 92 LHMGTDRTFMDAYLINGIPRFILLDRDGKI 121 (152)
T ss_dssp EECSSCTHHHHHTTCCSSCCEEEECTTSCE
T ss_pred eecCcchhHHHHcCcCCCCEEEEECCCCeE
Confidence 334567789999999999999999744443
No 119
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.63 E-value=3e-16 Score=92.84 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=50.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCcc-ccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIK-GYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~-~~Pt~~~~~~~ 66 (116)
.+++|+|+|+|||+|+.+.|.++++++. + .+.+..+|+++++. ++++++|+ ..||+++|++|
T Consensus 25 ~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G 91 (112)
T 3iv4_A 25 KYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNG 91 (112)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETT
T ss_pred CCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECC
Confidence 3799999999999999999999999884 3 68888888888865 57777777 47777777764
No 120
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.63 E-value=6.6e-16 Score=95.48 Aligned_cols=88 Identities=17% Similarity=0.327 Sum_probs=64.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|.||++||++|+++.|.+.++.+.+++. .+.++.++++...+.. +++++. +|. .
T Consensus 30 k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~-~~~---------------~- 91 (152)
T 2lrn_A 30 KYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSY-WNQ---------------V- 91 (152)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCC-SEE---------------E-
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCC-CeE---------------E-
Confidence 47899999999999999999999999999875 4889999888654322 233322 221 1
Q ss_pred Eecc-CccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDCT-EHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+.. .+.++++.|+|.++||++++++++++
T Consensus 92 ~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i 122 (152)
T 2lrn_A 92 LLQKDDVKDVLESYCIVGFPHIILVDPEGKI 122 (152)
T ss_dssp EECHHHHHHHHHHTTCCSSCEEEEECTTSEE
T ss_pred ecccchhHHHHHHhCCCcCCeEEEECCCCeE
Confidence 1111 15789999999999999999554444
No 121
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.63 E-value=7.5e-16 Score=85.05 Aligned_cols=55 Identities=18% Similarity=0.288 Sum_probs=44.6
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
..|+||++||++|+++.|.++++++.+++ .+.+..+| +.++++++++.++||+++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~---~~~~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK---EMDQILEAGLTALPGLAV 56 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC---SHHHHHHHTCSSSSCEEE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec---CHHHHHHCCCCcCCEEEE
Confidence 46899999999999999999999999876 57777776 556666777777777766
No 122
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.63 E-value=3.2e-15 Score=89.96 Aligned_cols=86 Identities=20% Similarity=0.332 Sum_probs=63.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-----cc----cccccCCccccceEEEcCceeeece
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-----HG----PLCKEYDIKGYPTFHHLALTIMIIR 71 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-----~~----~~~~~~~v~~~Pt~~~~~~~v~f~~ 71 (116)
++++|.||++||++|+.+.|.++++.+.+++ .+.++.++... .. ...++++...+|
T Consensus 23 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 87 (138)
T 4evm_A 23 KKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLP------------- 87 (138)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCC-------------
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCee-------------
Confidence 4789999999999999999999999998665 68888885432 11 223344443333
Q ss_pred eeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+..+.+.+++++|++.++|+++++++++++
T Consensus 88 -----~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 117 (138)
T 4evm_A 88 -----VLVDPSGKLLETYGVRSYPTQAFIDKEGKL 117 (138)
T ss_dssp -----EEECTTCHHHHHTTCCSSSEEEEECTTCCE
T ss_pred -----EEECcchHHHHHcCcccCCeEEEECCCCcE
Confidence 223567789999999999999999554443
No 123
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.62 E-value=3.7e-15 Score=92.72 Aligned_cols=86 Identities=10% Similarity=0.255 Sum_probs=66.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-ccccccCCccccceEEEcCceeeeceeeEEEEec
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-GPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDC 79 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~ 79 (116)
.+++|.||++||++|+.+.|.+.++.+++++. .+.++.++.+.. .+..+++++. +| +-.
T Consensus 42 k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~-~~------------------~~~ 101 (158)
T 3hdc_A 42 KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVS-FN------------------FLS 101 (158)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCS-CE------------------EEE
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCC-ce------------------EEE
Confidence 47899999999999999999999999999854 588999988763 3344444432 11 223
Q ss_pred cCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 80 TEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 80 ~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+.+.++.+.|+|.++|+++++++++++
T Consensus 102 d~~~~~~~~~~v~~~P~~~lid~~G~i 128 (158)
T 3hdc_A 102 DATGQVQQRYGANRLPDTFIVDRKGII 128 (158)
T ss_dssp CTTSHHHHHTTCCSSSEEEEECTTSBE
T ss_pred CchHHHHHHhCCCCcceEEEEcCCCCE
Confidence 567889999999999999999655543
No 124
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.62 E-value=1.3e-16 Score=95.31 Aligned_cols=65 Identities=18% Similarity=0.314 Sum_probs=45.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc--ccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH--GPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.++|+|||+||++|+.+.+.+....+.......+.+.++|++.+ ++++.+++|.++||++||++|
T Consensus 20 ~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G 86 (116)
T 3dml_A 20 LRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD 86 (116)
T ss_dssp EEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT
T ss_pred CEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC
Confidence 57999999999999999875543322110000367778887775 467778888888888888765
No 125
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.62 E-value=1.4e-16 Score=93.91 Aligned_cols=53 Identities=21% Similarity=0.435 Sum_probs=40.1
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC------CcccccccCCccccceEEE
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT------EHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~------~~~~~~~~~~v~~~Pt~~~ 62 (116)
+++|+|||+||++|+++.|.++++++.++ .+|++ ++.+++++|+|+++||+++
T Consensus 14 ~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 14 IGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp HTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE
Confidence 35789999999999999999999886653 34444 4556666777777777665
No 126
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.62 E-value=1.5e-15 Score=92.95 Aligned_cols=89 Identities=16% Similarity=0.303 Sum_probs=66.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+.+.|.+.++.+.+++. .+.++.++++.+.+ ..+++++..+|. .
T Consensus 32 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~----------------~ 94 (148)
T 3hcz_A 32 KYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLN----------------V 94 (148)
T ss_dssp SEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEE----------------E
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceE----------------E
Confidence 47899999999999999999999999999874 49999999886654 333444443331 1
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+......+++.|+|.++|+++++++++++
T Consensus 95 ~d~~~~~~~~~~~~i~~~P~~~lid~~G~i 124 (148)
T 3hcz_A 95 RDSKNHTDFKITYDIYATPVLYVLDKNKVI 124 (148)
T ss_dssp ECTTCCCCHHHHHCCCSSCEEEEECTTCBE
T ss_pred eccccchhHHHhcCcCCCCEEEEECCCCcE
Confidence 233333449999999999999999555443
No 127
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.62 E-value=9.9e-16 Score=95.10 Aligned_cols=86 Identities=15% Similarity=0.305 Sum_probs=63.3
Q ss_pred CeEEEEEEcCCCHHHHh-hhHHHHHHHHHhccCcceEEEEEeCC------Cc----ccccccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGYCKK-AKPEYVKAAEVLKDNHKVALAAIDCT------EH----GPLCKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~-~~~~~~~~~~~~~~~~~~~~~~vd~~------~~----~~~~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++|++ +.|.+.++.+++++. .+.++.++++ .. ...++++++. +|.+
T Consensus 31 k~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 99 (160)
T 3lor_A 31 KVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK-FPVA--------- 99 (160)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC-SCEE---------
T ss_pred CEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCC-CcEE---------
Confidence 47999999999999999 599999999999875 4888888873 22 2334455543 3311
Q ss_pred ceeeEEEEeccCccc------hhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGP------LCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~------~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
. +.... +.++|+|.++|+++++++++++
T Consensus 100 -------~--d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i 133 (160)
T 3lor_A 100 -------V--DMPREGQRIPSTMKKYRLEGTPSIILADRKGRI 133 (160)
T ss_dssp -------E--ECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBE
T ss_pred -------E--CCccccchhhhHHHhcccCccceEEEECCCCcE
Confidence 1 22333 8999999999999999655443
No 128
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.61 E-value=7.4e-16 Score=94.28 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=65.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHh-ccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVL-KDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++|.||++||++|+.+.|.+.++.+.+ ++. .+.++.++++...+ ..+++++. +|
T Consensus 34 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~-~~----------------- 94 (148)
T 3fkf_A 34 RYLLLNFWASWCDPQPEANAELKRLNKEYKKNK-NFAMLGISLDIDREAWETAIKKDTLS-WD----------------- 94 (148)
T ss_dssp SEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT-TEEEEEEECCSCHHHHHHHHHHTTCC-SE-----------------
T ss_pred cEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC-CeEEEEEECCCCHHHHHHHHHHcCCC-ce-----------------
Confidence 47899999999999999999999999999 653 48999998887653 23344432 12
Q ss_pred EE-ec-cCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 76 AI-DC-TEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 76 ~v-~~-~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+ +. ..+..+++.|+|+++|+++++++++++
T Consensus 95 ~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i 127 (148)
T 3fkf_A 95 QVCDFTGLSSETAKQYAILTLPTNILLSPTGKI 127 (148)
T ss_dssp EECCSCGGGCHHHHHTTCCSSSEEEEECTTSBE
T ss_pred EEEccCCcchHHHHhcCCCCcCEEEEECCCCeE
Confidence 11 11 126789999999999999999555443
No 129
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.41 E-value=3.8e-17 Score=94.80 Aligned_cols=63 Identities=22% Similarity=0.402 Sum_probs=52.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++|.||++||++|+++.|.++++++.+++ ++.++.+|++++.++++++++.++||++++++|
T Consensus 21 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (106)
T 2yj7_A 21 PVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNG 83 (106)
Confidence 689999999999999999999999998876 578888888777777777777777777766543
No 130
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.61 E-value=1.6e-15 Score=92.84 Aligned_cols=89 Identities=12% Similarity=0.120 Sum_probs=66.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+||++||++|+++.|.+.++.+++++. .+.++.++.+.+.+ ..+++++...|.+
T Consensus 33 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~---------------- 95 (143)
T 4fo5_A 33 RYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQF---------------- 95 (143)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEE----------------
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceee----------------
Confidence 47899999999999999999999999999865 58899998886643 3334444321211
Q ss_pred Eec-cCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDC-TEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~-~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+. ....++.+.|+|.+.|+++++++.+++
T Consensus 96 ~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i 126 (143)
T 4fo5_A 96 HEGLGKESELYKKYDLRKGFKNFLINDEGVI 126 (143)
T ss_dssp ECTTGGGSHHHHHTTGGGCCCEEEECTTSBE
T ss_pred ecccccchHHHHHcCCCCCCcEEEECCCCEE
Confidence 121 134678999999999999999755554
No 131
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.61 E-value=5.5e-15 Score=90.25 Aligned_cols=84 Identities=21% Similarity=0.342 Sum_probs=64.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---------cccccCCccccceEEEcCceeeece
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---------PLCKEYDIKGYPTFHHLALTIMIIR 71 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---------~~~~~~~v~~~Pt~~~~~~~v~f~~ 71 (116)
.+++|.||++||++|+++.|.+.++.+.+++ .+.++.++++... ...+++++. +|
T Consensus 30 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~------------- 93 (148)
T 2b5x_A 30 KPTLIHFWSISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT-QP------------- 93 (148)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC-SC-------------
T ss_pred CEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCCCccccCHHHHHHHHHHcCCC-cc-------------
Confidence 3689999999999999999999999999987 4889999877521 233444442 22
Q ss_pred eeEEEEeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
+-.+.+.++++.|+|.++||+++++++++
T Consensus 94 -----~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 122 (148)
T 2b5x_A 94 -----IFVDSDHALTDAFENEYVPAYYVFDKTGQ 122 (148)
T ss_dssp -----EEECSSCHHHHHTCCCCSSEEEEECTTCB
T ss_pred -----eEECCchhHHHHhCCCCCCEEEEECCCCc
Confidence 12356788999999999999999954444
No 132
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.61 E-value=1.4e-15 Score=92.74 Aligned_cols=86 Identities=19% Similarity=0.363 Sum_probs=63.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHH---HHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceee
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVK---AAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLA 73 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~---~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~ 73 (116)
.+++|+||++||++|+++.|.+.+ +.+.+++. .+.++.++.+.+.+.. +++++. +|
T Consensus 28 k~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~-~~--------------- 90 (142)
T 3ewl_A 28 QYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQG-WI--------------- 90 (142)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTT-CE---------------
T ss_pred CEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCC-cc---------------
Confidence 478999999999999999999988 88888764 4889999888665433 343331 22
Q ss_pred EEEEeccCccchhh--hcCCCCCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCK--EYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~--~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+..+.. .|+|.++|+++++++++++
T Consensus 91 ---~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i 122 (142)
T 3ewl_A 91 ---VGWNKAGDIRTRQLYDIRATPTIYLLDGRKRV 122 (142)
T ss_dssp ---EEECTTCHHHHTTCSCCCSSSEEEEECTTCBE
T ss_pred ---eeeCCccchhhHHHcCCCCCCeEEEECCCCCE
Confidence 11244455544 8999999999999655553
No 133
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.60 E-value=1e-15 Score=90.23 Aligned_cols=61 Identities=13% Similarity=0.215 Sum_probs=52.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
|..++.||++||++|+.+.|.++++++++ .+.+..+|++++++++++|+++ +|+++++.+|
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~----~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG 89 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS----WFELEVINIDGNEHLTRLYNDR-VPVLFAVNED 89 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS----CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTT
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc----CCeEEEEECCCCHHHHHHhCCC-CceEEEEECC
Confidence 56789999999999999999999998887 3788889999888888888886 8888877654
No 134
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.60 E-value=2.2e-16 Score=97.52 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=47.0
Q ss_pred eEEEEEEcCC--CHHHHhhhHHHHHHHHHhccCcceE--EEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPG--CGYCKKAKPEYVKAAEVLKDNHKVA--LAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~w--C~~C~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
.++|+||++| |++|+.+.|.++++++++ + ++. ++++|++++++++++|+|+++||+++|++|
T Consensus 36 ~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G 101 (142)
T 2es7_A 36 DGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDG 101 (142)
T ss_dssp SEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC
T ss_pred CEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCC
Confidence 3678899887 999999999999999998 5 566 888888877777777777777777777664
No 135
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=8.2e-16 Score=92.72 Aligned_cols=61 Identities=20% Similarity=0.369 Sum_probs=46.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCC--cccccccCCccccceEEEc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTE--HGPLCKEYDIKGYPTFHHL 63 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 63 (116)
.+++|+||++||++|+++.|.+ +++.+.++. .+.++.+|++. +..+++++++.++||++++
T Consensus 28 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 93 (130)
T 2kuc_A 28 KLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHAYPTLLFI 93 (130)
T ss_dssp SCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCSSCEEEEE
T ss_pred CeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCCCCEEEEE
Confidence 3689999999999999999999 777776655 67777777763 4556666666666666666
No 136
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.59 E-value=8e-16 Score=97.83 Aligned_cols=62 Identities=15% Similarity=0.246 Sum_probs=48.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHH-H--HHHHHHhccCcceEEEEEeCCCcccccccC--------CccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPE-Y--VKAAEVLKDNHKVALAAIDCTEHGPLCKEY--------DIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~-~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~--------~v~~~Pt~~~~~ 64 (116)
++|+|+|||+||++|+.+.|. + .++++.+++ ++.++++|.++.+++++.| ++.++||++|++
T Consensus 40 KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~ 112 (173)
T 3ira_A 40 KPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMT 112 (173)
T ss_dssp CCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEEC
T ss_pred CCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeEC
Confidence 479999999999999999984 2 567777766 6899999999888777666 555555555554
No 137
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.59 E-value=1.5e-15 Score=93.68 Aligned_cols=85 Identities=21% Similarity=0.335 Sum_probs=64.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+++.|.+.++.+.+++. .+.++.++++..++ ..+++++. +|
T Consensus 27 k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~-~~------------------ 86 (151)
T 2f9s_A 27 KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVN-FP------------------ 86 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCC-SC------------------
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCC-ce------------------
Confidence 47899999999999999999999999999764 48888888876543 23344432 22
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
+-.+.+.++++.|+|.++|++++++++++
T Consensus 87 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 115 (151)
T 2f9s_A 87 VVLDTDRQVLDAYDVSPLPTTFLINPEGK 115 (151)
T ss_dssp EEEETTSHHHHHTTCCSSCEEEEECTTSE
T ss_pred EEECCchHHHHhcCCCCCCeEEEECCCCc
Confidence 11245678999999999999999954444
No 138
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.59 E-value=2.1e-15 Score=93.93 Aligned_cols=77 Identities=13% Similarity=0.256 Sum_probs=57.7
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|+|| ++||++|+++.|.+ .++.+.++. .+.++.+|++....+. .|
T Consensus 48 k~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~-------~~------------------ 100 (154)
T 2ju5_A 48 KPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQP-------EE------------------ 100 (154)
T ss_dssp CCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCC-------HH------------------
T ss_pred CeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCC-------hh------------------
Confidence 37899999 99999999999999 777666644 7899999988765210 00
Q ss_pred EeccCccchhhhcCCCCCCEEEEe-cCCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYF-HYFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~ 105 (116)
..+.+.+++++|+|.++||++++ ++|+.
T Consensus 101 -~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~ 129 (154)
T 2ju5_A 101 -QRQKNQELKAQYKVTGFPELVFIDAEGKQ 129 (154)
T ss_dssp -HHHHHHHHHHHTTCCSSSEEEEECTTCCE
T ss_pred -hHhhHHHHHHHcCCCCCCEEEEEcCCCCE
Confidence 01345678888899999998888 44443
No 139
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.38 E-value=8.7e-17 Score=97.11 Aligned_cols=62 Identities=24% Similarity=0.497 Sum_probs=52.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCC--CcccccccCCccccceEEEcC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCT--EHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
.+++|+||++||++|+++.|.+ +++.+.+++ ++.++.+|++ ++..+++++++.++||+++++
T Consensus 20 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d 86 (130)
T 2lst_A 20 RMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLV 86 (130)
Confidence 3689999999999999999999 888888776 6888888884 557788888888888888883
No 140
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.59 E-value=5e-16 Score=97.81 Aligned_cols=52 Identities=13% Similarity=0.360 Sum_probs=36.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc-ccccCCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP-LCKEYDI 54 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v 54 (116)
.+++|+|||+||++|+.+.|.++++.+.++. .+.++.+|++.++. ++.++++
T Consensus 47 k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~ 99 (164)
T 1sen_A 47 LPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSP 99 (164)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCT
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcc
Confidence 4789999999999999999999997766544 34555555554443 3344333
No 141
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.59 E-value=8.6e-17 Score=96.89 Aligned_cols=61 Identities=21% Similarity=0.427 Sum_probs=46.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++|+||++||++|+++.|.++++++.++ .+.++.+|++++.++++++++.++||++++++
T Consensus 38 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 98 (130)
T 1wmj_A 38 VVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEAMPTFLFIKD 98 (130)
T ss_dssp BCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCSSCCCCBCTT
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCccceEEEEeC
Confidence 68999999999999999999999999886 46677777666666666666666665555544
No 142
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.59 E-value=1e-14 Score=92.81 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=68.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-----ccccccCCccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-----GPLCKEYDIKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++|+||++||++|+.+.|.++++.+.+++. .+.++.++.+.. ..+.+++++..+|.+
T Consensus 61 k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~--------------- 124 (186)
T 1jfu_A 61 KTLLVNLWATWCVPCRKEMPALDELQGKLSGP-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYF--------------- 124 (186)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCE---------------
T ss_pred CEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceE---------------
Confidence 37899999999999999999999999999854 588888888765 355677777665522
Q ss_pred EEeccCccchhhhcCCC----CCCEEEEecCCccc
Q psy3452 76 AIDCTEHGPLCKEYDIK----GYPTFQYFHYFNKQ 106 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~----~~Pt~~~~~~g~~~ 106 (116)
.+.+..+.+.|++. ++|+++++++++++
T Consensus 125 ---~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i 156 (186)
T 1jfu_A 125 ---NDQKAKVFQDLKAIGRALGMPTSVLVDPQGCE 156 (186)
T ss_dssp ---ECTTCHHHHHHHTTTCCSSSSEEEEECTTSBE
T ss_pred ---ECCcchHHHHhccccccCCCCEEEEECCCCCE
Confidence 14557788888885 89999999655444
No 143
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.58 E-value=6.4e-15 Score=90.69 Aligned_cols=85 Identities=16% Similarity=0.280 Sum_probs=65.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+.+.|.+.++.+.+++. .+.++.++++.+.+.. +++++. +|
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~-~~------------------ 88 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAE-FT------------------ 88 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCC-SE------------------
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCC-Cc------------------
Confidence 47899999999999999999999999999874 3888999888665332 333331 11
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
+-.+.+.++++.|++.++|++++++++++
T Consensus 89 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~ 117 (152)
T 3gl3_A 89 VAFDPKGQTPRLYGVKGMPTSFLIDRNGK 117 (152)
T ss_dssp EEECTTCHHHHHTTCCSSSEEEEECTTSB
T ss_pred eeECCcchhHHHcCCCCCCeEEEECCCCC
Confidence 22356778999999999999999955444
No 144
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.58 E-value=4.9e-15 Score=98.66 Aligned_cols=64 Identities=17% Similarity=0.178 Sum_probs=56.5
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhc--cCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLK--DNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
++++.|||+||++|+++.|.+++++..++ +..++.+..+|++.+++++++|+|+++||+++ ++.
T Consensus 140 ~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-~G~ 205 (243)
T 2hls_A 140 VHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-NGY 205 (243)
T ss_dssp EEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE-TTE
T ss_pred cEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE-CCE
Confidence 56889999999999999999999999983 11269999999999999999999999999988 553
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.58 E-value=3.2e-15 Score=92.14 Aligned_cols=93 Identities=17% Similarity=0.279 Sum_probs=67.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-----cccccCCccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-----PLCKEYDIKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
.+++|.||++||++|+++.|.+.++.+.+++. .+.++.++.+.+. ..++++++..
T Consensus 29 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~------------------- 88 (153)
T 2l5o_A 29 KVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPF------------------- 88 (153)
T ss_dssp CEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCS-------------------
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCc-------------------
Confidence 47899999999999999999999999999875 4788888765332 2334444321
Q ss_pred EEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 76 AIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
.+..+.+..+++.|+|.++|+++++++++++. ..|.|.
T Consensus 89 ~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~g~ 126 (153)
T 2l5o_A 89 TVMYDADKAVGQAFGTQVYPTSVLIGKKGEIL-KTYVGE 126 (153)
T ss_dssp EEEECSSCHHHHHHTCCSSSEEEEECSSSCCC-EEEESS
T ss_pred eEEcCchHHHHHHcCCCccCeEEEECCCCcEE-EEEcCC
Confidence 23345678899999999999999996554432 334443
No 146
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.57 E-value=1.3e-15 Score=94.09 Aligned_cols=83 Identities=12% Similarity=0.211 Sum_probs=61.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+++.|.++++.+. + ++.++.++.+.+.+.. +++++. +..
T Consensus 43 k~~ll~f~~~~C~~C~~~~~~l~~l~~~--~--~v~~v~v~~~~~~~~~~~~~~~~~~~------------------~~~ 100 (156)
T 1kng_A 43 KVSLVNVWASWCVPCHDEAPLLTELGKD--K--RFQLVGINYKDAADNARRFLGRYGNP------------------FGR 100 (156)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHTTC--T--TSEEEEEEESCCHHHHHHHHHHHCCC------------------CSE
T ss_pred CEEEEEEEcccCHhHHHHHHHHHHHHhc--C--CeEEEEEECCCCHHHHHHHHHHcCCC------------------Cce
Confidence 3689999999999999999999998776 2 6888888887654333 333321 122
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
+..+.+..+++.|++.++|++++++.+++
T Consensus 101 ~~~d~~~~~~~~~~v~~~P~~~~id~~G~ 129 (156)
T 1kng_A 101 VGVDANGRASIEWGVYGVPETFVVGREGT 129 (156)
T ss_dssp EEEETTSHHHHHTTCCSSCEEEEECTTSB
T ss_pred eeeCchhHHHHhcCcCccCeEEEEcCCCC
Confidence 33466788999999999998888854444
No 147
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.57 E-value=9.6e-15 Score=97.60 Aligned_cols=72 Identities=15% Similarity=0.307 Sum_probs=52.3
Q ss_pred eEEEEEE--cCCCHHHHhhhHHHHHHHHHhcc-CcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEe
Q psy3452 2 FYSILFY--SPGCGYCKKAKPEYVKAAEVLKD-NHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAID 78 (116)
Q Consensus 2 ~v~v~F~--a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~ 78 (116)
+|+|+|| ||||+ +.|.|+++++.+.+ ...+.+ +.+|
T Consensus 35 ~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~-------------------------------------akVD 73 (248)
T 2c0g_A 35 YSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLI-------------------------------------ATVG 73 (248)
T ss_dssp EEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEE-------------------------------------EEEE
T ss_pred CEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEE-------------------------------------EEEE
Confidence 6899999 99999 99999999999864 223444 5555
Q ss_pred ccC-----ccchhhhcCCC--CCCEEEEecCCcccCCcCC--CCCC
Q psy3452 79 CTE-----HGPLCKEYDIK--GYPTFQYFHYFNKQSPSPY--HNDY 115 (116)
Q Consensus 79 ~~~-----~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~~y--~g~~ 115 (116)
|+. +.+++++|+|+ ++||+++|+ |+...+..| .|..
T Consensus 74 ~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~ 118 (248)
T 2c0g_A 74 VKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDV 118 (248)
T ss_dssp ECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCC
T ss_pred CCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCC
Confidence 554 66777788888 888888887 652234566 6654
No 148
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.57 E-value=1.9e-14 Score=88.68 Aligned_cols=86 Identities=12% Similarity=0.240 Sum_probs=65.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-c----cccccCCccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-G----PLCKEYDIKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~----~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
.+++|.||++||++|+.+.|.+.++.+.+++. .+.++.++.+.+ . ...+++++. +|
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~-~~----------------- 89 (154)
T 3kcm_A 29 QVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFT-LP----------------- 89 (154)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCC-CC-----------------
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCC-ee-----------------
Confidence 47899999999999999999999999999875 488888888875 2 223343332 22
Q ss_pred EEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 76 AIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+..+++.|++.++|+++++++++++
T Consensus 90 -~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 119 (154)
T 3kcm_A 90 -VLLDADKRVGKLYGTTGVPETFVIDRHGVI 119 (154)
T ss_dssp -EEECTTCHHHHHHTCCSBCEEEEECTTSBE
T ss_pred -EEecCchHHHHHhCCCCCCeEEEECCCCcE
Confidence 113567789999999999998888555443
No 149
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.57 E-value=5.1e-15 Score=92.17 Aligned_cols=85 Identities=22% Similarity=0.414 Sum_probs=63.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccC----CccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEY----DIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~----~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++||++|+.+.|.+.++.+.+++. .+.++.++++.+.+.++++ ++. +|.
T Consensus 35 k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~-~~~----------------- 95 (165)
T 3or5_A 35 KAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGII-YPV----------------- 95 (165)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCC-SCE-----------------
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCC-Cce-----------------
Confidence 47899999999999999999999999999875 4999999998765544433 332 221
Q ss_pred EeccCccchhhhc------CCCCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEY------DIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~------~v~~~Pt~~~~~~g~~~ 106 (116)
+. + ..++.+.| ++.++|+++++++++++
T Consensus 96 ~~-~-~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i 129 (165)
T 3or5_A 96 MM-A-TPELIRAFNGYIDGGITGIPTSFVIDASGNV 129 (165)
T ss_dssp EE-C-CHHHHHHHHTTSTTCSCSSSEEEEECTTSBE
T ss_pred Ee-c-CHHHHHHHhhhhccCCCCCCeEEEECCCCcE
Confidence 11 2 23677777 89999999999555443
No 150
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.56 E-value=6.8e-15 Score=91.95 Aligned_cols=84 Identities=12% Similarity=0.231 Sum_probs=63.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC------------------Cccc----ccccCCccccc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT------------------EHGP----LCKEYDIKGYP 58 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~------------------~~~~----~~~~~~v~~~P 58 (116)
++++|+||++||++|+.+.|.+.++.+.++ .+.++.++++ .+.+ ..+++++..+|
T Consensus 38 k~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 38 DVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 478999999999999999999999999998 5888888887 3332 23344443333
Q ss_pred eEEEcCceeeeceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 59 TFHHLALTIMIIRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 59 t~~~~~~~v~f~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+ . + +.++.+.|+|.++|+++++++++++
T Consensus 115 ~~----------------~--d-~~~~~~~~~v~~~P~~~lid~~G~i 143 (165)
T 3ha9_A 115 MV----------------M--D-DGSLVEKFNVRSIDYIVIMDKSSNV 143 (165)
T ss_dssp EE----------------E--C-CSHHHHHTTCCSSSEEEEEETTCCE
T ss_pred EE----------------e--C-hHHHHHHhCCCCceEEEEEcCCCcE
Confidence 11 1 3 6789999999999999999655554
No 151
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.56 E-value=7.9e-15 Score=91.40 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=22.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHH
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKA 25 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~ 25 (116)
++|+|+|||+||++|+.+.|.+.+.
T Consensus 45 KpVlV~F~A~WC~~Ck~m~p~~~~~ 69 (151)
T 3ph9_A 45 KPLMVIHHLEDCQYSQALKKVFAQN 69 (151)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHC
T ss_pred CcEEEEEECCCCHhHHHHHHHHhcC
Confidence 4799999999999999999998864
No 152
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.34 E-value=2.3e-16 Score=96.26 Aligned_cols=93 Identities=12% Similarity=0.159 Sum_probs=63.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCc-ceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEecc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNH-KVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCT 80 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~ 80 (116)
+++|+||++||++|+.+.|.+.++.+.+++.. .+.++.++++...+..+++--+.-. ......+..+
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~------------~~~~~~~~~~ 95 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHG------------DWLAIPYRSG 95 (143)
Confidence 78999999999999999999999999985322 6778888877654333332211100 0001122234
Q ss_pred CccchhhhcCCCCCCEEEEecCCccc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
...+++++|+|.++||++++++++++
T Consensus 96 ~~~~~~~~~~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 96 PASNVTAKYGITGIPALVIVKKDGTL 121 (143)
Confidence 55789999999999999999744443
No 153
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.56 E-value=2.2e-15 Score=94.42 Aligned_cols=83 Identities=10% Similarity=0.065 Sum_probs=59.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+||++||++|+++.|.++++.+. .+.++.++++.+.+.. +++++.. | .
T Consensus 52 k~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~-~-----------------~ 108 (168)
T 2b1k_A 52 KPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPY-A-----------------L 108 (168)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCC-S-----------------E
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCC-c-----------------e
Confidence 3689999999999999999999998875 3677777776554322 3333221 1 1
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+..+.+.+++++|+|.++|+++++++++++
T Consensus 109 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 138 (168)
T 2b1k_A 109 SLFDGDGMLGLDLGVYGAPETFLIDGNGII 138 (168)
T ss_dssp EEEETTCHHHHHHTCCSSSEEEEECTTSBE
T ss_pred eeECcchHHHHHcCccccCEEEEECCCCeE
Confidence 223567889999999999988777554443
No 154
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=1e-14 Score=89.92 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=65.6
Q ss_pred CeEEEEEEcCCCHH--HHhhhHHHHHHHHHh-ccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceee
Q psy3452 1 MFYSILFYSPGCGY--CKKAKPEYVKAAEVL-KDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLA 73 (116)
Q Consensus 1 ~~v~v~F~a~wC~~--C~~~~~~~~~~~~~~-~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~ 73 (116)
++++|+||++||++ |+.+.|.+.++.+++ ++. .+.++.++.+..++ ..+++++. +|
T Consensus 34 k~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~-~~--------------- 96 (150)
T 3fw2_A 34 KSLLINFWASWNDSISQKQSNSELREIYKKYKKNK-YIGMLGISLDVDKQQWKDAIKRDTLD-WE--------------- 96 (150)
T ss_dssp SEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS-SEEEEEEECCSCHHHHHHHHHHTTCC-SE---------------
T ss_pred CEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC-CeEEEEEEcCCCHHHHHHHHHHhCCC-ce---------------
Confidence 47999999999999 999999999999999 554 48999998887643 23344442 22
Q ss_pred EEEE-ec-cCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 74 LAAI-DC-TEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v-~~-~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+ +. ..+.++.+.|+|.++|+++++++++++
T Consensus 97 --~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i 129 (150)
T 3fw2_A 97 --QVCDFGGLNSEVAKQYSIYKIPANILLSSDGKI 129 (150)
T ss_dssp --EECCSCGGGCHHHHHTTCCSSSEEEEECTTSBE
T ss_pred --EEEcCcccchHHHHHcCCCccCeEEEECCCCEE
Confidence 11 11 126789999999999999999655544
No 155
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.55 E-value=3.8e-14 Score=90.04 Aligned_cols=86 Identities=10% Similarity=0.163 Sum_probs=63.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcce------EEEEEeCCC-cccc----cccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKV------ALAAIDCTE-HGPL----CKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~------~~~~vd~~~-~~~~----~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++|+.+.|.+.++.+++++. .+ .++.++++. +.+. ++++++. +|.+
T Consensus 60 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~-~~~~--------- 128 (183)
T 3lwa_A 60 QVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLD-YPSI--------- 128 (183)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCC-SCEE---------
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCC-ccEE---------
Confidence 47899999999999999999999999999874 26 999999987 4433 3344543 3311
Q ss_pred ceeeEEEEeccCccchhhhc---CCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEY---DIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~---~v~~~Pt~~~~~~g~~~ 106 (116)
.+....+.+.+ ++.++|+++++++++++
T Consensus 129 ---------~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i 159 (183)
T 3lwa_A 129 ---------YDPPFMTAASLGGVPASVIPTTIVLDKQHRP 159 (183)
T ss_dssp ---------ECTTCGGGGGTTTCCTTCCSEEEEECTTSCE
T ss_pred ---------ECCcchHHHHhccCCCCCCCeEEEECCCCcE
Confidence 24456666666 58999998888655553
No 156
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.55 E-value=9.4e-15 Score=88.96 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=56.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccc--cceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKG--YPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--~Pt~~~~~~ 65 (116)
+++++||++ |++|+.+.|.++++++++.+ ++.|+++|.++++.++++|++++ +||++++++
T Consensus 25 pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~ 87 (133)
T 2djk_A 25 PLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEV 87 (133)
T ss_dssp CEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECT
T ss_pred CEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCEEEEEec
Confidence 689999999 89999999999999999987 79999999999999999999988 999988875
No 157
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.55 E-value=4.6e-15 Score=94.13 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=61.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|+||++||++|+++.|.++++.++ .+.++.++.+...+ ..+++++.. ..
T Consensus 59 k~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~------------------~~ 115 (176)
T 3kh7_A 59 KPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPY------------------LL 115 (176)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCC------------------SE
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCC------------------ce
Confidence 3689999999999999999999998876 37777777655543 333444322 11
Q ss_pred EeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+..+++.|+|.++|+++++++++++
T Consensus 116 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 145 (176)
T 3kh7_A 116 SISDADGTLGLDLGVYGAPETYLIDKQGII 145 (176)
T ss_dssp EEEETTCHHHHHHTCCSSCEEEEECTTCBE
T ss_pred EEECCcchHHHHcCCCCCCeEEEECCCCeE
Confidence 233567889999999999999999665554
No 158
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.54 E-value=2.9e-14 Score=94.88 Aligned_cols=78 Identities=22% Similarity=0.393 Sum_probs=55.4
Q ss_pred eEEEEEEc--CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEec
Q psy3452 2 FYSILFYS--PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDC 79 (116)
Q Consensus 2 ~v~v~F~a--~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~ 79 (116)
+|+|+||| |||+ +.|.|+++++.+.+...+.++++|+++.. |
T Consensus 24 ~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g--------------------------------~ 67 (240)
T 2qc7_A 24 FVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG--------------------------------D 67 (240)
T ss_dssp EEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS--------------------------------S
T ss_pred CEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc--------------------------------c
Confidence 68999999 9999 99999999999975334656555543210 2
Q ss_pred cCccchhhhcCCC--CCCEEEEecCCcccCCcCCCCCC
Q psy3452 80 TEHGPLCKEYDIK--GYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 80 ~~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
..+.+++++|+|+ ++||+++|++|+......|.|..
T Consensus 68 ~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~ 105 (240)
T 2qc7_A 68 KLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAV 105 (240)
T ss_dssp CCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCS
T ss_pred hhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCC
Confidence 3466777888888 88888888777621346777754
No 159
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.52 E-value=1.6e-14 Score=89.14 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=59.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC--Cccc----ccccCCccccceEEEcCceeeeceeeE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT--EHGP----LCKEYDIKGYPTFHHLALTIMIIRLAL 74 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~----~~~~~~v~~~Pt~~~~~~~v~f~~~~~ 74 (116)
.+++|.||++||++|+++.|.+.++.+++ .+.++.++++ ...+ ..+++++ . +
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~-~-----------------~ 88 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPR-F-----------------I 88 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTT-E-----------------E
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCC-C-----------------c
Confidence 36899999999999999999999999999 3667777773 3322 2333332 1 1
Q ss_pred EEEe--ccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 75 AAID--CTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 75 ~~v~--~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
..+. ......+++.|++.++|++++++++++
T Consensus 89 ~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~ 121 (154)
T 3ia1_A 89 PLLASDRDRPHEVAARFKVLGQPWTFVVDREGK 121 (154)
T ss_dssp ECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSE
T ss_pred ccccccccchHHHHHHhCCCcccEEEEECCCCC
Confidence 1111 136778999999999999999955444
No 160
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.52 E-value=1.8e-14 Score=94.50 Aligned_cols=59 Identities=22% Similarity=0.366 Sum_probs=54.9
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
++++||++||++|+++.|.++++++.++ .+.++.+|++++++++++|+++++||+++ ++
T Consensus 139 ~~v~F~a~wC~~C~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-~G 197 (229)
T 2ywm_A 139 EIWVFVTTSCGYCPSAAVMAWDFALAND---YITSKVIDASENQDLAEQFQVVGVPKIVI-NK 197 (229)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEEGGGCHHHHHHTTCCSSSEEEE-GG
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHCC---CeEEEEEECCCCHHHHHHcCCcccCEEEE-CC
Confidence 4889999999999999999999999984 69999999999999999999999999998 44
No 161
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.50 E-value=1.1e-14 Score=95.32 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=64.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-------cc----cccccCCccccceEEEcCceeeec
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-------HG----PLCKEYDIKGYPTFHHLALTIMII 70 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~~~~~v~~~Pt~~~~~~~v~f~ 70 (116)
+++|+||++||++|+...|.++++.+++++. .+.++.++.+. .. ..++++++ .+|
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~-~~~------------ 126 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGY-GFP------------ 126 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTC-CSC------------
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCC-Ccc------------
Confidence 4899999999999999999999999999875 38888888852 22 23334443 222
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|+|.+.|+++++++++++
T Consensus 127 ------~l~D~~~~~~~~~~v~~~P~~~liD~~G~i 156 (218)
T 3u5r_E 127 ------YLKDASQSVAKAYGAACTPDFFLYDRERRL 156 (218)
T ss_dssp ------EEECTTCHHHHHHTCCEESEEEEECTTCBE
T ss_pred ------EEECCccHHHHHcCCCCCCeEEEECCCCcE
Confidence 112567889999999999999999665553
No 162
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.50 E-value=3.2e-14 Score=90.70 Aligned_cols=85 Identities=22% Similarity=0.322 Sum_probs=64.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-----------ccccccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-----------GPLCKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----------~~~~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++|+++.|.++++.+++++. +.++.++.+.. ...++++++. +|
T Consensus 34 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~-~~----------- 99 (188)
T 2cvb_A 34 PLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIF-FP----------- 99 (188)
T ss_dssp SEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCC-SC-----------
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCC-ce-----------
Confidence 47899999999999999999999999999873 88999988532 1233344432 22
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++.+.|+++++++++++
T Consensus 100 -------~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 129 (188)
T 2cvb_A 100 -------YLLDETQEVAKAYRALRTPEVFLFDERRLL 129 (188)
T ss_dssp -------EEECSSSHHHHHTTCCEESEEEEECTTCBE
T ss_pred -------EEECCcchHHHHcCCCCCCeEEEECCCCcE
Confidence 112567789999999999999999655544
No 163
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=6.1e-14 Score=97.92 Aligned_cols=86 Identities=20% Similarity=0.269 Sum_probs=65.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-----c----cccccCCccccceEEEcCceeeece
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-----G----PLCKEYDIKGYPTFHHLALTIMIIR 71 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----~----~~~~~~~v~~~Pt~~~~~~~v~f~~ 71 (116)
++++|+||++||++|+++.|.+.++.+++++. .+.++.++++.. . +.++++++. +|
T Consensus 83 K~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~-fp------------- 147 (352)
T 2hyx_A 83 KVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGIS-YP------------- 147 (352)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCC-SC-------------
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCC-cc-------------
Confidence 47999999999999999999999999999864 488999987631 1 233444432 22
Q ss_pred eeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+..+.+.++++.|+|.++|+++++++++++
T Consensus 148 -----v~~D~~~~l~~~ygV~~~Pt~~lID~~G~I 177 (352)
T 2hyx_A 148 -----IALDNNYATWTNYRNRYWPAEYLIDATGTV 177 (352)
T ss_dssp -----EEECTTSHHHHHTTCCEESEEEEECTTSBE
T ss_pred -----EEeCCcHHHHHHcCCCccCEEEEEeCCCeE
Confidence 223567889999999999999999554443
No 164
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.49 E-value=2e-14 Score=92.03 Aligned_cols=85 Identities=24% Similarity=0.339 Sum_probs=64.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-------c----cccccCCccccceEEEcCceeeec
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-------G----PLCKEYDIKGYPTFHHLALTIMII 70 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-------~----~~~~~~~v~~~Pt~~~~~~~v~f~ 70 (116)
+++|+||++||++|+.+.|.+.++.+++++. .+.++.++++.. . ...+++++. +|
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~-~~------------ 113 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYP-FP------------ 113 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC-SC------------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCC-ce------------
Confidence 5899999999999999999999999999874 488888888532 1 233344432 22
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|+|.++|+++++++++++
T Consensus 114 ------~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 143 (196)
T 2ywi_A 114 ------YLYDETQEVAKAYDAACTPDFYIFDRDLKC 143 (196)
T ss_dssp ------EEECSSCHHHHHHTCCEESEEEEEETTCBE
T ss_pred ------EEECCchHHHHHhCCCCCCeEEEEcCCCeE
Confidence 112567789999999999999999654443
No 165
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.49 E-value=5.9e-14 Score=87.67 Aligned_cols=85 Identities=12% Similarity=0.176 Sum_probs=65.8
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
+++|.|| ++||++|+...|.+.++.+++++. .+.++.++.+... ..++++++. +| +
T Consensus 31 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~-~~------------------~ 90 (161)
T 3drn_A 31 NIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLP-FI------------------L 90 (161)
T ss_dssp EEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCC-SE------------------E
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCC-ce------------------E
Confidence 4899999 999999999999999999999875 4888888887543 234454443 22 2
Q ss_pred eccCccchhhhcCCCC----CCEEEEecCCccc
Q psy3452 78 DCTEHGPLCKEYDIKG----YPTFQYFHYFNKQ 106 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~----~Pt~~~~~~g~~~ 106 (116)
-.+.+.++.+.|++.+ .|+++++++++++
T Consensus 91 ~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i 123 (161)
T 3drn_A 91 VSDPDKKIRELYGAKGFILPARITFVIDKKGII 123 (161)
T ss_dssp EECTTSHHHHHTTCCCSSSCCCEEEEECTTSBE
T ss_pred EECCcHHHHHHcCCCCcCcccceEEEECCCCEE
Confidence 2256788999999999 9999999655554
No 166
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.46 E-value=2.8e-14 Score=81.17 Aligned_cols=53 Identities=15% Similarity=0.353 Sum_probs=44.3
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
++.||++||++|+.+.|.+++++..+ +.++|++++++++++|+++ +||+++ .+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~ 55 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PM 55 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TT
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-EC
Confidence 67899999999999999998764332 5789999999899899988 999887 44
No 167
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=4.7e-15 Score=92.15 Aligned_cols=91 Identities=20% Similarity=0.190 Sum_probs=63.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHH-HHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCceeeeceeeEEEEec
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVK-AAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALTIMIIRLALAAIDC 79 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~-~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~ 79 (116)
.+++|.||++||++|+++.|.+.+ +.+.++....+.++.++++...+.++++.-+. ++.+ .+-.
T Consensus 34 k~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~--------------~~~~-~~~~ 98 (159)
T 2ls5_A 34 KVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKST--------------GVTY-PLGL 98 (159)
Confidence 368999999999999999999998 88888722268888888887655444443221 1111 1122
Q ss_pred cCccchhhhcC--CCCCCEEEEecCCccc
Q psy3452 80 TEHGPLCKEYD--IKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 80 ~~~~~~~~~~~--v~~~Pt~~~~~~g~~~ 106 (116)
+.+..+.+.|+ +.++|+++++++++++
T Consensus 99 d~~~~~~~~~~~~~~~~P~~~lid~~G~i 127 (159)
T 2ls5_A 99 DPGADIFAKYALRDAGITRNVLIDREGKI 127 (159)
Confidence 45677888999 5679999999554443
No 168
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.46 E-value=5.1e-14 Score=78.57 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=46.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC-CcccccccCCccccceEEEcCcee
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT-EHGPLCKEYDIKGYPTFHHLALTI 67 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~~~~~v 67 (116)
++.||++||++|+.+.+.++++.++++. .+.++.+|.+ ++.+++++++++++||+++ ++.+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i-~g~~ 65 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI-DGAA 65 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE-TTEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE-CCEE
Confidence 6789999999999999999988766543 4555555554 4567788899999999877 5543
No 169
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.45 E-value=7.2e-13 Score=82.93 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=64.2
Q ss_pred CeEEEEEEcCC-CHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc---ccccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPG-CGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH---GPLCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.||++| |++|+...|.+.++.+++ . .+.++.++.+.. .+.++++++..+|.+
T Consensus 45 k~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~---------------- 105 (167)
T 2jsy_A 45 KVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETL---------------- 105 (167)
T ss_dssp SCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEE----------------
T ss_pred CeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEe----------------
Confidence 36899999999 999999999999999999 3 688888887753 334555555443321
Q ss_pred Eecc-CccchhhhcCCCC------CCEEEEecCCccc
Q psy3452 77 IDCT-EHGPLCKEYDIKG------YPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~-~~~~~~~~~~v~~------~Pt~~~~~~g~~~ 106 (116)
.+ .+.++.+.|++.. .|+++++++.+++
T Consensus 106 --~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i 140 (167)
T 2jsy_A 106 --SDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKV 140 (167)
T ss_dssp --EGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCE
T ss_pred --eCCchhHHHHHhCCccccCCceeeEEEEEcCCCcE
Confidence 13 5678999999987 4999999765554
No 170
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.41 E-value=5.6e-13 Score=83.88 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=36.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
.+++|+||++||++|+ .+|.+.++.+++++. .+.++.++++
T Consensus 33 k~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d 73 (171)
T 3cmi_A 33 KVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCN 73 (171)
T ss_dssp CEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEEC
T ss_pred CEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECc
Confidence 4789999999999999 999999999999875 4888888764
No 171
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.38 E-value=7.2e-13 Score=82.36 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=63.5
Q ss_pred CeEEEEEEcCCCHH-HHhhhHHHHHHHHHhccC---cceEEEEEeCCCcc-------cccccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGY-CKKAKPEYVKAAEVLKDN---HKVALAAIDCTEHG-------PLCKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~-C~~~~~~~~~~~~~~~~~---~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++ |+...|.++++.+++++. ..+.++.++++... +.+++++.. +|
T Consensus 24 k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~-~~----------- 91 (164)
T 2ggt_A 24 QWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPK-LV----------- 91 (164)
T ss_dssp CEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSS-CE-----------
T ss_pred CEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC-eE-----------
Confidence 47899999999998 999999999999998752 25788888877532 233444432 11
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCC---------------EEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYP---------------TFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~P---------------t~~~~~~g~~~ 106 (116)
....+.+....+++.|+|...| +++++++++++
T Consensus 92 ----~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i 139 (164)
T 2ggt_A 92 ----GLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF 139 (164)
T ss_dssp ----EEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCE
T ss_pred ----EEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeE
Confidence 1111234556789999999999 78888655444
No 172
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.38 E-value=4.8e-13 Score=83.76 Aligned_cols=90 Identities=9% Similarity=0.048 Sum_probs=62.2
Q ss_pred CeEEEEEEcCCCHH-HHhhhHHHHHHHHHhccC---cceEEEEEeCCCc---c----cccccCCccccceEEEcCceeee
Q psy3452 1 MFYSILFYSPGCGY-CKKAKPEYVKAAEVLKDN---HKVALAAIDCTEH---G----PLCKEYDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~a~wC~~-C~~~~~~~~~~~~~~~~~---~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+||++||++ |+...|.++++.+++++. ..+.++.++++.. . ..+++++... |
T Consensus 27 k~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~-~----------- 94 (171)
T 2rli_A 27 QWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRL-L----------- 94 (171)
T ss_dssp SEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTC-C-----------
T ss_pred CEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCe-E-----------
Confidence 47899999999998 999999999999999631 2688888887742 1 2334444321 1
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCC---------------EEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYP---------------TFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~P---------------t~~~~~~g~~~ 106 (116)
+..-+.+....+++.|+|...| +++++++.+++
T Consensus 95 ----~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i 142 (171)
T 2rli_A 95 ----GLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF 142 (171)
T ss_dssp ----EEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCE
T ss_pred ----EEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeE
Confidence 1111112345788899999888 88888655544
No 173
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.38 E-value=2.4e-13 Score=87.49 Aligned_cols=86 Identities=8% Similarity=0.101 Sum_probs=64.4
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---ccc-------CCccccceEEEcCceeee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKE-------YDIKGYPTFHHLALTIMI 69 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~-------~~v~~~Pt~~~~~~~v~f 69 (116)
++++|+|| ++||++|+...|.+.++.+++++. ++.++.++.+....+ .++ +++. +|
T Consensus 34 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~-~~----------- 100 (198)
T 1zof_A 34 NGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVS-FP----------- 100 (198)
T ss_dssp SEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCS-SC-----------
T ss_pred CcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCce-eE-----------
Confidence 47899999 999999999999999999999765 488888888764322 122 2221 22
Q ss_pred ceeeEEEEeccCccchhhhcCCC-----CCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIK-----GYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~-----~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. +.|+++++++++++
T Consensus 101 -------~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i 135 (198)
T 1zof_A 101 -------MVADITKSISRDYDVLFEEAIALRGAFLIDKNMKV 135 (198)
T ss_dssp -------EEECTTSHHHHHTTCEETTTEECEEEEEEETTTEE
T ss_pred -------EEECCchHHHHHhCCcccCCcccceEEEECCCCEE
Confidence 1225678899999999 99999999655443
No 174
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.37 E-value=5e-13 Score=85.26 Aligned_cols=90 Identities=11% Similarity=0.079 Sum_probs=64.3
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+|| ++||++|+...|.+.++.+++++. .+.++.++.+....+ +++++... .+.+.
T Consensus 32 k~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~--------------~~~~~- 95 (187)
T 1we0_A 32 KWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVG--------------SIEYI- 95 (187)
T ss_dssp SEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHH--------------TCCSE-
T ss_pred CCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhcccc--------------CCCce-
Confidence 47899999 999999999999999999999865 488888888764322 22321000 01111
Q ss_pred EeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. +.|+++++++++++
T Consensus 96 ~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i 131 (187)
T 1we0_A 96 MIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVI 131 (187)
T ss_dssp EEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred EEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeE
Confidence 1224568899999999 99999999655443
No 175
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.36 E-value=4.1e-13 Score=86.28 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=64.5
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCC-ccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYD-IKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~-v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++|+|| ++||++|+...|.+.++.+++++. .+.++.++.+.... ..++++ ...+ .+.
T Consensus 46 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~---------------~~~ 109 (195)
T 2bmx_A 46 KWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTL---------------PFP 109 (195)
T ss_dssp CEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGC---------------CSC
T ss_pred CcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCC---------------cee
Confidence 47899999 999999999999999999999865 48888888876432 223331 0011 111
Q ss_pred EEeccCccchhhhcCCC-----CCCEEEEecCCccc
Q psy3452 76 AIDCTEHGPLCKEYDIK-----GYPTFQYFHYFNKQ 106 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~-----~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++.+.|++. +.|+++++++++++
T Consensus 110 -~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i 144 (195)
T 2bmx_A 110 -MLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEI 144 (195)
T ss_dssp -EEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBE
T ss_pred -EEeCCchHHHHHhCCcccCCCccceEEEEcCCCeE
Confidence 1124568899999999 99999999655544
No 176
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.36 E-value=1.5e-13 Score=93.57 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=39.2
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC-CCcccccccCCccccceEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC-TEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~-~~~~~~~~~~~v~~~Pt~~~ 62 (116)
+++|||+||++|+++.|.+++++++++ .+.+.++|. +++++++++++++++||+++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i 257 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQAQECTEAGITSYPTWII 257 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCCHHHHTTTCCSTTEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHHHHHHHcCCcccCeEEE
Confidence 689999999999999999999886652 111111112 23567777778888887554
No 177
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.35 E-value=4.7e-13 Score=83.13 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=63.6
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
+++|.|| ++||++|+...|.+.++.+++++. .+.++.++.+... +.++++++ .+|.+ .
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~-~~~~~----------------~ 99 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGF-TFPLL----------------S 99 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTC-CSCEE----------------E
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCC-CceEE----------------e
Confidence 7899998 999999999999999999999765 5888888887543 23344444 23311 1
Q ss_pred eccCccchhhhcCCC----CCC--EEEEecCCccc
Q psy3452 78 DCTEHGPLCKEYDIK----GYP--TFQYFHYFNKQ 106 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~----~~P--t~~~~~~g~~~ 106 (116)
|...+.++.+.|++. ++| +++++++++++
T Consensus 100 d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i 134 (160)
T 1xvw_A 100 DFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGII 134 (160)
T ss_dssp CTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBE
T ss_pred cCCcChHHHHHcCCccccCCCeeeeEEEECCCCeE
Confidence 211367899999999 999 88888555444
No 178
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.35 E-value=8.7e-13 Score=84.30 Aligned_cols=42 Identities=17% Similarity=0.159 Sum_probs=37.3
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+||++||++|+..+|.+.++.+++++. .+.++.++++
T Consensus 47 k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d 88 (187)
T 3dwv_A 47 SPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSN 88 (187)
T ss_dssp SCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBC
T ss_pred CEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECc
Confidence 47899999999999999999999999999875 3888888776
No 179
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.35 E-value=2.5e-12 Score=81.96 Aligned_cols=42 Identities=10% Similarity=0.123 Sum_probs=37.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
.+++|.||++||++|++..|.+.++.+++++. .+.++.++++
T Consensus 50 k~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d 91 (185)
T 2gs3_A 50 FVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCN 91 (185)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECc
Confidence 47899999999999999999999999999875 4888888876
No 180
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.34 E-value=1.4e-12 Score=83.95 Aligned_cols=89 Identities=8% Similarity=0.064 Sum_probs=64.6
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++|.|| ++||++|....|.+.++.+++++. .+.++.++.+..... .+++ ++..++
T Consensus 35 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~-------------- 99 (197)
T 1qmv_A 35 KYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLN-------------- 99 (197)
T ss_dssp SEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCS--------------
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCc--------------
Confidence 47899999 999999999999999999999765 588999988764322 2222 221211
Q ss_pred eEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+. +-.+.+.++++.|++. .+|+++++++++++
T Consensus 100 -~p-~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i 137 (197)
T 1qmv_A 100 -IP-LLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVL 137 (197)
T ss_dssp -SC-EEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred -eE-EEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcE
Confidence 11 1125567899999998 89999999665554
No 181
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.34 E-value=1.1e-12 Score=83.95 Aligned_cols=89 Identities=15% Similarity=0.131 Sum_probs=64.9
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++|+|| ++||++|....|.+.++.+++++. .+.++.++.+..... .+++ ++...+
T Consensus 32 k~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~-------------- 96 (192)
T 2h01_A 32 KYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIK-------------- 96 (192)
T ss_dssp CEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCS--------------
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCC--------------
Confidence 47899999 999999999999999999999754 588888888754322 2222 221211
Q ss_pred eEEEEeccCccchhhhcCCC-----CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK-----GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~-----~~Pt~~~~~~g~~~ 106 (116)
+ .+-.+.+.++++.|++. ..|+++++++++++
T Consensus 97 -~-~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i 133 (192)
T 2h01_A 97 -H-TLISDISKSIARSYDVLFNESVALRAFVLIDKQGVV 133 (192)
T ss_dssp -S-EEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBE
T ss_pred -c-CeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEE
Confidence 1 12225578899999999 89999999655554
No 182
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.34 E-value=1.3e-12 Score=83.63 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=37.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+||++||++|+..+|.+.++.+++++. .+.++.++++
T Consensus 49 k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d 90 (190)
T 2vup_A 49 SPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCN 90 (190)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECC
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcC
Confidence 47899999999999999999999999999874 4888888877
No 183
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.33 E-value=4.5e-12 Score=82.51 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=37.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
.+++|+|||+||++|++.+|.++++.+++++. .+.++.++++
T Consensus 48 k~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 48 KVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 47899999999999999999999999999875 4888888876
No 184
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.33 E-value=1.5e-12 Score=85.47 Aligned_cols=87 Identities=9% Similarity=0.102 Sum_probs=64.3
Q ss_pred CeEEEEEEc-CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----C--ccccceEEEcCceeeec
Q psy3452 1 MFYSILFYS-PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----D--IKGYPTFHHLALTIMII 70 (116)
Q Consensus 1 ~~v~v~F~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~--v~~~Pt~~~~~~~v~f~ 70 (116)
.+++|+||+ +||++|....|.+.++.+++++. .+.++.|+.+.... ..+++ + -..+|
T Consensus 70 k~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~------------ 136 (222)
T 3ztl_A 70 KYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIP------------ 136 (222)
T ss_dssp SEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSC------------
T ss_pred CeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhcccccccee------------
Confidence 478999996 99999999999999999999865 48888888875432 22222 1 11222
Q ss_pred eeeEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++.+.|++. ..|+++++++.+++
T Consensus 137 ------~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I 172 (222)
T 3ztl_A 137 ------LLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGIL 172 (222)
T ss_dssp ------EEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEE
T ss_pred ------EEeCCchHHHHHcCCeecCCCCccceEEEECCCCeE
Confidence 1225568899999999 89999999665554
No 185
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.33 E-value=3.4e-13 Score=85.73 Aligned_cols=43 Identities=12% Similarity=0.264 Sum_probs=38.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
.+++|+||++||++|++.+|.++++.+++++. .+.++.++++.
T Consensus 50 k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~ 92 (181)
T 2p31_A 50 SVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQ 92 (181)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCC
T ss_pred CEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcC
Confidence 47899999999999999999999999999874 48888888763
No 186
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.32 E-value=4.2e-12 Score=80.69 Aligned_cols=42 Identities=12% Similarity=0.230 Sum_probs=37.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+||++||++|+...|.+.++.+++++. .+.++.++++
T Consensus 48 k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d 89 (183)
T 2obi_A 48 FVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCN 89 (183)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 47899999999999999999999999999874 4888888876
No 187
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.32 E-value=2.3e-12 Score=84.19 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=65.3
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
.+++|.|| ++||++|....|.+.++.+++++. ++.++.++.+.... .++++ ++..++
T Consensus 53 k~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~-------------- 117 (213)
T 2i81_A 53 KYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIK-------------- 117 (213)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCS--------------
T ss_pred CeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCC--------------
Confidence 37899999 999999999999999999999754 58888888875432 22222 222211
Q ss_pred eEEEEeccCccchhhhcCCC-----CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK-----GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~-----~~Pt~~~~~~g~~~ 106 (116)
+ .+-.+.+.++++.|++. ..|+++++++++++
T Consensus 118 -f-p~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i 154 (213)
T 2i81_A 118 -H-TLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIV 154 (213)
T ss_dssp -S-EEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBE
T ss_pred -c-eEEECCchHHHHHhCCccccCCcccEEEEECCCCEE
Confidence 1 12235678899999999 89999999665554
No 188
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.32 E-value=1.4e-12 Score=84.24 Aligned_cols=89 Identities=10% Similarity=0.097 Sum_probs=65.0
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++|+|| ++||++|....|.+.++.+++++. .+.++.++.+..... .+++ ++...+
T Consensus 37 k~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~-------------- 101 (202)
T 1uul_A 37 KWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMDSEYSHLAWTSIERKRGGLGQMN-------------- 101 (202)
T ss_dssp SEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCS--------------
T ss_pred CeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCc--------------
Confidence 37899999 999999999999999999999764 588889988754322 2222 221211
Q ss_pred eEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+ .+-.+.+.++++.|++. +.|+++++++++++
T Consensus 102 -~-p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i 139 (202)
T 1uul_A 102 -I-PILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNL 139 (202)
T ss_dssp -S-CEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBE
T ss_pred -e-eEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEE
Confidence 1 11224678899999999 99999999665554
No 189
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.31 E-value=5.8e-12 Score=79.66 Aligned_cols=85 Identities=5% Similarity=-0.000 Sum_probs=60.1
Q ss_pred CeEEEEEEcCC-CHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYSPG-CGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a~w-C~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|+||++| |++|+...|.+.++.++ + .+.++.++.+....+ ++++++..+|
T Consensus 45 k~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~---~v~vv~Is~D~~~~~~~~~~~~~~~~~~------------------ 102 (175)
T 1xvq_A 45 KSVLLNIFPSVDTPVCATSVRTFDERAAA-S---GATVLCVSKDLPFAQKRFCGAEGTENVM------------------ 102 (175)
T ss_dssp SCEEEEECSCCCSSCCCHHHHHHHHHHHH-T---TCEEEEEESSCHHHHTTCC------CEE------------------
T ss_pred CEEEEEEEeCCCCchHHHHHHHHHHHHhh-c---CCEEEEEECCCHHHHHHHHHHcCCCCce------------------
Confidence 36899999999 99999999999999888 3 688888888755432 2333322211
Q ss_pred EeccCccchhhhcCCCCC---------CEEEEecCCcccC
Q psy3452 77 IDCTEHGPLCKEYDIKGY---------PTFQYFHYFNKQS 107 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~~~---------Pt~~~~~~g~~~~ 107 (116)
+-.+.+.++.+.|++... |+++++++++++.
T Consensus 103 ~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 103 PASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp EEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEE
T ss_pred EeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEE
Confidence 222445789999999887 8999997665553
No 190
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.31 E-value=2.7e-12 Score=84.20 Aligned_cols=89 Identities=10% Similarity=0.131 Sum_probs=65.2
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++|+|| ++||++|+...|.+.++.+++++. .+.++.++.+..... ++++ ++...
T Consensus 57 k~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~--------------- 120 (220)
T 1zye_A 57 KYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHM--------------- 120 (220)
T ss_dssp SEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSC---------------
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCC---------------
Confidence 47899999 999999999999999999999764 588899988764322 2222 22121
Q ss_pred eEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
.+ .+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 121 ~f-p~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I 159 (220)
T 1zye_A 121 NI-ALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVI 159 (220)
T ss_dssp SS-EEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred ce-EEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEE
Confidence 11 12235678899999999 99999999665554
No 191
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.31 E-value=1.9e-12 Score=72.53 Aligned_cols=54 Identities=22% Similarity=0.430 Sum_probs=42.1
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc----cccccCC--ccccceE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG----PLCKEYD--IKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~--v~~~Pt~ 60 (116)
++.|+++||++|+++.+.++++++.++ .+.+..+|.++++ +++++++ +.++|++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i 62 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI 62 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeE
Confidence 566999999999999999999988765 4788888876553 4555666 6666665
No 192
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.30 E-value=3.2e-12 Score=79.72 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=38.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
.+++|+||++||++|+..+|.+.++.+++++. .+.++.++++.
T Consensus 32 k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~ 74 (169)
T 2v1m_A 32 HVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQ 74 (169)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCC
T ss_pred CEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCc
Confidence 47899999999999999999999999999874 48888888763
No 193
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.29 E-value=2.8e-12 Score=79.86 Aligned_cols=85 Identities=9% Similarity=0.219 Sum_probs=64.3
Q ss_pred eEEEEEEc-CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFYS-PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
+++|.||+ +||++|....|.+.++.+++++. .+.++.+..+... ..++++++. +| +
T Consensus 37 ~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~-~~------------------~ 96 (163)
T 3gkn_A 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFA-FP------------------L 96 (163)
T ss_dssp CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCS-SC------------------E
T ss_pred cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCC-ce------------------E
Confidence 68999998 99999999999999999999875 4778888877433 233444432 22 1
Q ss_pred eccCccchhhhcCCCC------------CCEEEEecCCccc
Q psy3452 78 DCTEHGPLCKEYDIKG------------YPTFQYFHYFNKQ 106 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~------------~Pt~~~~~~g~~~ 106 (116)
-.+.+.++.+.|++.. .|+++++++.+++
T Consensus 97 ~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i 137 (163)
T 3gkn_A 97 VSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQV 137 (163)
T ss_dssp EECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCE
T ss_pred EECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeE
Confidence 1256778999999987 9999999766665
No 194
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.27 E-value=3.6e-12 Score=83.76 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=64.3
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
.+++|+|| ++||++|...+|.+.++.+++++. .+.++.++.+.... .++++ ++...+
T Consensus 57 k~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~-------------- 121 (221)
T 2c0d_A 57 KYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVE-------------- 121 (221)
T ss_dssp CEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCS--------------
T ss_pred CeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCc--------------
Confidence 47899999 999999999999999999999754 58888888865432 23333 221211
Q ss_pred eEEEEeccCccchhhhcCC-----CCCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDI-----KGYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v-----~~~Pt~~~~~~g~~~ 106 (116)
+. +-.+.+.++++.|++ ...|+++++++.+++
T Consensus 122 -fp-~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I 158 (221)
T 2c0d_A 122 -FT-LVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCV 158 (221)
T ss_dssp -SE-EEECTTSHHHHHTTCEETTTEECEEEEEECTTSBE
T ss_pred -eE-EEECCchHHHHHcCCcccCCCccceEEEECCCCeE
Confidence 11 112457789999999 478999999766554
No 195
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.27 E-value=6.2e-12 Score=82.01 Aligned_cols=87 Identities=9% Similarity=0.080 Sum_probs=64.1
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----Ccc--ccceEEEcCceeeec
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DIK--GYPTFHHLALTIMII 70 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v~--~~Pt~~~~~~~v~f~ 70 (116)
++++|+|| ++||++|...+|.+.++.+++++. .+.++.++.+.... .++++ ++. .+|
T Consensus 49 k~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp------------ 115 (211)
T 2pn8_A 49 KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIP------------ 115 (211)
T ss_dssp SEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSC------------
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceE------------
Confidence 37899999 999999999999999999999765 58888888875432 22333 111 222
Q ss_pred eeeEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 116 ------~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I 151 (211)
T 2pn8_A 116 ------LLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGIL 151 (211)
T ss_dssp ------EEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred ------EEECCchHHHHHcCCcccCCCcccceEEEECCCCEE
Confidence 1124567899999995 69999999766554
No 196
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.27 E-value=2.6e-12 Score=75.95 Aligned_cols=51 Identities=18% Similarity=0.342 Sum_probs=35.7
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-----ccccccCCccccceE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-----GPLCKEYDIKGYPTF 60 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-----~~~~~~~~v~~~Pt~ 60 (116)
+++ ||++||++|+++.|.++++.. .+.++.+|.+.+ ..+++++++.++||+
T Consensus 22 vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~ 77 (116)
T 2e7p_A 22 VVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV 77 (116)
T ss_dssp EEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE
Confidence 445 999999999999999988643 244555554443 346666677777766
No 197
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.25 E-value=1.9e-11 Score=76.34 Aligned_cols=85 Identities=8% Similarity=0.048 Sum_probs=62.7
Q ss_pred CeEEEEEEc-CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFYS-PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+||+ +||++|....|.+.++.+++ . .+.++.++.+.... .++++++..+|.
T Consensus 43 k~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~----------------- 102 (163)
T 1psq_A 43 KKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDLPFAQKRWCGAEGLDNAIM----------------- 102 (163)
T ss_dssp SEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHHTCTTSEE-----------------
T ss_pred CEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCCHHHHHHHHHhcCCCCcEE-----------------
Confidence 378999995 99999999999999999888 3 68888888875432 344555423331
Q ss_pred Eecc-CccchhhhcCCC----C--CCEEEEecCCccc
Q psy3452 77 IDCT-EHGPLCKEYDIK----G--YPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~-~~~~~~~~~~v~----~--~Pt~~~~~~g~~~ 106 (116)
-.+ .+.++.+.|++. + .|+++++++.+++
T Consensus 103 -l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i 138 (163)
T 1psq_A 103 -LSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTI 138 (163)
T ss_dssp -EECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBE
T ss_pred -ecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeE
Confidence 114 567899999987 3 3999999766554
No 198
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.25 E-value=1.3e-11 Score=89.92 Aligned_cols=61 Identities=20% Similarity=0.230 Sum_probs=55.5
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+.++.||++||++|+.+.|.+++++..++ ++.+.++|.+.++++++++++.++||+++ ++.
T Consensus 119 ~~i~~f~a~~C~~C~~~~~~l~~~a~~~~---~v~~~~vd~~~~~~~~~~~~i~svPt~~i-~g~ 179 (521)
T 1hyu_A 119 FEFETYYSLSCHNCPDVVQALNLMAVLNP---RIKHTAIDGGTFQNEITERNVMGVPAVFV-NGK 179 (521)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCSSSEEEE-TTE
T ss_pred cceEEEECCCCcCcHHHHHHHHHHHhHcC---ceEEEEEechhhHHHHHHhCCCccCEEEE-CCE
Confidence 46888999999999999999999998875 69999999999999999999999999987 554
No 199
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.25 E-value=4e-12 Score=79.38 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=37.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+||++||++|+..+|.+.++.+++++. .+.++.++++
T Consensus 33 k~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d 74 (170)
T 2p5q_A 33 KVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCN 74 (170)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECC
Confidence 47899999999999999999999999999874 4888888876
No 200
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.24 E-value=3.1e-12 Score=74.36 Aligned_cols=54 Identities=26% Similarity=0.452 Sum_probs=44.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC--CcccccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT--EHGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~ 61 (116)
++.++.|+++||++|+.+.+.++++++ .+.+..+|++ ++++++++++ ..+|+++
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~ 71 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVFH 71 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEEE
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEEE
Confidence 467889999999999999999886532 4788899988 6778888889 8899764
No 201
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.24 E-value=2.6e-11 Score=76.40 Aligned_cols=83 Identities=13% Similarity=0.014 Sum_probs=61.3
Q ss_pred eEEEEEE-cCCCHHHHh-hhHHHHHHHHHhccCcce-EEEEEeCCCcc---cccccCCcc-ccceEEEcCceeeeceeeE
Q psy3452 2 FYSILFY-SPGCGYCKK-AKPEYVKAAEVLKDNHKV-ALAAIDCTEHG---PLCKEYDIK-GYPTFHHLALTIMIIRLAL 74 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~-~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~---~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~ 74 (116)
+++|.|| ++||++|.. .+|.+.++.+++++. .+ .++.++.+... ..++++++. .+|.
T Consensus 33 ~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~--------------- 96 (167)
T 2wfc_A 33 KGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVNDSFVMDAWGKAHGADDKVQM--------------- 96 (167)
T ss_dssp EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSCHHHHHHHHHHTTCTTTSEE---------------
T ss_pred cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCCHHHHHHHHHhcCCCcceEE---------------
Confidence 5777776 999999999 999999999998765 48 88888877543 345566553 2341
Q ss_pred EEEeccCccchhhhcCCCCC-----------CEEEEecCC
Q psy3452 75 AAIDCTEHGPLCKEYDIKGY-----------PTFQYFHYF 103 (116)
Q Consensus 75 ~~v~~~~~~~~~~~~~v~~~-----------Pt~~~~~~g 103 (116)
-.+.+.++++.|++... |+.+++++|
T Consensus 97 ---l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI~~G 133 (167)
T 2wfc_A 97 ---LADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVIEDG 133 (167)
T ss_dssp ---EECTTSHHHHHTTCEECCHHHHSSCEECCEEEEEETT
T ss_pred ---EECCCCcHHHHcCCccccccccCcccceEEEEEEeCC
Confidence 12567889999998754 998888544
No 202
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.24 E-value=3.1e-11 Score=75.59 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=61.7
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|+|| ++||++|...+|.+.++.+++ . .+.++.++.+.... .++++++..+| .
T Consensus 44 k~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~-----------------~ 103 (165)
T 1q98_A 44 KRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADLPFAQARFCGAEGIENAK-----------------T 103 (165)
T ss_dssp SEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSCHHHHTTCTTTTTCTTEE-----------------E
T ss_pred CeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCCHHHHHHHHHHcCCCceE-----------------E
Confidence 36899999 899999999999999999998 3 68888888775432 33444432222 1
Q ss_pred EeccC-ccchhhhcCCCC---------CCEEEEecCCccc
Q psy3452 77 IDCTE-HGPLCKEYDIKG---------YPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~-~~~~~~~~~v~~---------~Pt~~~~~~g~~~ 106 (116)
+ .+. +.++++.|++.. .|+.+++++++++
T Consensus 104 l-~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i 142 (165)
T 1q98_A 104 V-STFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNV 142 (165)
T ss_dssp E-ECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBE
T ss_pred e-eccccchHHHHhCceecccccCCccceeEEEEcCCCEE
Confidence 1 133 678999999863 4999999765554
No 203
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.23 E-value=2.8e-12 Score=80.22 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=38.5
Q ss_pred CeEEEEEEcCCCHH-HHhhhHHHHHHHHHhccCc--ceEEEEEeCCCc
Q psy3452 1 MFYSILFYSPGCGY-CKKAKPEYVKAAEVLKDNH--KVALAAIDCTEH 45 (116)
Q Consensus 1 ~~v~v~F~a~wC~~-C~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~ 45 (116)
++++|+||++||++ |+...|.+.++.+++++.+ .+.++.++++.+
T Consensus 36 k~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 36 KVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp SEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred CEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 47899999999997 9999999999999998531 588889988753
No 204
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.22 E-value=1.9e-11 Score=75.94 Aligned_cols=82 Identities=10% Similarity=0.101 Sum_probs=59.0
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
+++|+|| ++||++|....|.+.++.+++++.+ .++.++.+... +.++++++. +| +
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d~~~~~~~~~~~~~~~-~~------------------~ 95 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSADSVTSQKKFQSKQNLP-YH------------------L 95 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESCCHHHHHHHHHHHTCS-SE------------------E
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCCCHHHHHHHHHHhCCC-ce------------------E
Confidence 5788887 9999999999999999999998764 77777776433 233444432 22 1
Q ss_pred eccCccchhhhcCCCCCC------EEEEecCCc
Q psy3452 78 DCTEHGPLCKEYDIKGYP------TFQYFHYFN 104 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~~P------t~~~~~~g~ 104 (116)
-.+.+.++.+.|++...| +.+++++|.
T Consensus 96 l~D~~~~~~~~~gv~~~p~~g~~~~~~li~~G~ 128 (159)
T 2a4v_A 96 LSDPKREFIGLLGAKKTPLSGSIRSHFIFVDGK 128 (159)
T ss_dssp EECTTCHHHHHHTCBSSSSSCBCCEEEEEETTE
T ss_pred EECCccHHHHHhCCcccccCCccceEEEEcCCE
Confidence 124577899999999998 555555553
No 205
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.22 E-value=5.7e-11 Score=74.66 Aligned_cols=84 Identities=10% Similarity=0.151 Sum_probs=61.8
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.|| ++||++|....|.+.++.+++ . ++.++.+..+... +.++++++..+|.+
T Consensus 48 k~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l---------------- 108 (171)
T 2yzh_A 48 VVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDLPFAQKRFCESFNIQNVTVA---------------- 108 (171)
T ss_dssp SEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSCHHHHHHHHHHTTCCSSEEE----------------
T ss_pred CeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCCHHHHHHHHHHcCCCCeEEe----------------
Confidence 36899999 899999999999999999888 3 6888888887543 23455555333311
Q ss_pred Eecc-CccchhhhcCCCC---------CCEEEEecCCccc
Q psy3452 77 IDCT-EHGPLCKEYDIKG---------YPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~-~~~~~~~~~~v~~---------~Pt~~~~~~g~~~ 106 (116)
.+ .+.++ +.|++.. .|+++++++++++
T Consensus 109 --~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i 145 (171)
T 2yzh_A 109 --SDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKV 145 (171)
T ss_dssp --ECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBE
T ss_pred --ecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeE
Confidence 13 56678 8999862 6999999766554
No 206
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.22 E-value=1.5e-11 Score=76.74 Aligned_cols=63 Identities=8% Similarity=0.113 Sum_probs=43.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCc--ccccccCCccccceEEEcCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEH--GPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++||+|+++||..|+.|.... .++.+.+++ ++.++++|.+.. ..+.++|++.++|+++|++.
T Consensus 43 K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~ 110 (153)
T 2dlx_A 43 KWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDP 110 (153)
T ss_dssp CEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECT
T ss_pred CeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeC
Confidence 4799999999999999997665 556666654 688888888543 23445555555555555543
No 207
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.21 E-value=4.6e-11 Score=79.01 Aligned_cols=84 Identities=10% Similarity=0.076 Sum_probs=62.5
Q ss_pred CeEEEEEE-cCCCHHHH-hhhHHHHHHHHHhccCcce-EEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeE
Q psy3452 1 MFYSILFY-SPGCGYCK-KAKPEYVKAAEVLKDNHKV-ALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLAL 74 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~-~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~ 74 (116)
++++|+|| ++||++|. ..+|.+.++.+++++. .+ .++.++.+... ..++++++..+|.+
T Consensus 34 k~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l-------------- 98 (241)
T 1nm3_A 34 KTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVNDTFVMNAWKEDEKSENISFI-------------- 98 (241)
T ss_dssp SEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSCHHHHHHHHHHTTCTTSEEE--------------
T ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCCHHHHHHHHHhcCCCceEEE--------------
Confidence 36899999 99999999 9999999999998765 47 88888877532 34455565444422
Q ss_pred EEEeccCccchhhhcCCC-----------CCCEEEEecCC
Q psy3452 75 AAIDCTEHGPLCKEYDIK-----------GYPTFQYFHYF 103 (116)
Q Consensus 75 ~~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g 103 (116)
.+.+.++++.|++. ..|+.+++++|
T Consensus 99 ----~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G 134 (241)
T 1nm3_A 99 ----PDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNG 134 (241)
T ss_dssp ----ECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETT
T ss_pred ----ECCCcHHHHHhCceeecccccCcccceeEEEEEECC
Confidence 25677899999986 45888888444
No 208
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.21 E-value=1.3e-11 Score=79.68 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=36.2
Q ss_pred CeEEEEEEcCCCHH-HHhhhHHHHHHHHHhccC--cceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCGY-CKKAKPEYVKAAEVLKDN--HKVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~~-C~~~~~~~~~~~~~~~~~--~~~~~~~vd~~~ 44 (116)
++++|+||++||++ |...+|.+.++.+.+... ..+.++.++.+.
T Consensus 42 k~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 42 KFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp SCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 47899999999997 999999999988877642 257788888774
No 209
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.21 E-value=1.6e-11 Score=78.42 Aligned_cols=89 Identities=12% Similarity=0.038 Sum_probs=63.5
Q ss_pred CeEEEEEEc-CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccC-CccccceEEEcCceeeeceeeEE
Q psy3452 1 MFYSILFYS-PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEY-DIKGYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 1 ~~v~v~F~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~-~v~~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++|.||+ +||++|...+|.+.++.+++++. .+.++.++.+... +.++++ ++..+ .+.
T Consensus 31 k~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~---------------~fp 94 (186)
T 1n8j_A 31 RWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKI---------------KYA 94 (186)
T ss_dssp SEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGC---------------CSE
T ss_pred CeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCC---------------cee
Confidence 378999995 99999999999999999999765 4888888877543 233344 11121 111
Q ss_pred EEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 76 AIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 95 -~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i 130 (186)
T 1n8j_A 95 -MIGDPTGALTRNFDNMREDEGLADRATFVVDPQGII 130 (186)
T ss_dssp -EEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred -EEECCchHHHHHhCCccCCCCceeeEEEEECCCCeE
Confidence 1224677899999997 37999999765554
No 210
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.21 E-value=3.9e-11 Score=77.60 Aligned_cols=87 Identities=10% Similarity=0.084 Sum_probs=63.7
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|.|| ++||++|....|.++++.+++ . .+.++.+..+.... .++++++..+|
T Consensus 79 k~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~f~------------------ 137 (200)
T 3zrd_A 79 KRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDLPFAQSRFCGAEGLSNVI------------------ 137 (200)
T ss_dssp SEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSCHHHHTTCTTTTTCTTEE------------------
T ss_pred CcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCCHHHHHHHHHHcCCCCce------------------
Confidence 36899999 789999999999999999999 3 58888888875433 33444443322
Q ss_pred EeccC-ccchhhhcCCC---------CCCEEEEecCCcccCC
Q psy3452 77 IDCTE-HGPLCKEYDIK---------GYPTFQYFHYFNKQSP 108 (116)
Q Consensus 77 v~~~~-~~~~~~~~~v~---------~~Pt~~~~~~g~~~~~ 108 (116)
+-.+. +.++.+.|++. ..|+++++++.+++..
T Consensus 138 ~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~ 179 (200)
T 3zrd_A 138 TLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIY 179 (200)
T ss_dssp EEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEE
T ss_pred EEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEE
Confidence 11244 78899999986 3699999976666533
No 211
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.20 E-value=3e-11 Score=77.33 Aligned_cols=83 Identities=8% Similarity=0.040 Sum_probs=60.2
Q ss_pred eEEEEEEcCCCHHHHh-hhHHHHHHHHHhccCcceE-EEEEeCCCc---ccccccCCcc-ccceEEEcCceeeeceeeEE
Q psy3452 2 FYSILFYSPGCGYCKK-AKPEYVKAAEVLKDNHKVA-LAAIDCTEH---GPLCKEYDIK-GYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~-~~~~~~~~~~~~~~~~~~~-~~~vd~~~~---~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++.||++||++|+. .+|.++++.+++++.+ +. ++.++.+.. ...++++++. .+|.+
T Consensus 59 vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g-v~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l--------------- 122 (184)
T 3uma_A 59 VVLFAVPGAFTPTCSLNHLPGYLENRDAILARG-VDDIAVVAVNDLHVMGAWATHSGGMGKIHFL--------------- 122 (184)
T ss_dssp EEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESSCHHHHHHHHHHHTCTTTSEEE---------------
T ss_pred EEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCHHHHHHHHHHhCCCCceEEE---------------
Confidence 4566677999999999 7999999999998764 66 777777653 2345555554 34422
Q ss_pred EEeccCccchhhhcCCC-----------CCCEEEEecCC
Q psy3452 76 AIDCTEHGPLCKEYDIK-----------GYPTFQYFHYF 103 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g 103 (116)
.+.+.+++++|++. ..|+.+++++|
T Consensus 123 ---~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG 158 (184)
T 3uma_A 123 ---SDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDG 158 (184)
T ss_dssp ---ECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETT
T ss_pred ---EcCchHHHHHcCCceeccccCCcccceeEEEEECCC
Confidence 25678899999985 35888888755
No 212
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.20 E-value=4.4e-11 Score=74.94 Aligned_cols=44 Identities=14% Similarity=0.263 Sum_probs=38.3
Q ss_pred CeEEEEEEcCCCH-HHHhhhHHHHHHHHHhccCc-ceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCG-YCKKAKPEYVKAAEVLKDNH-KVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~-~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~ 44 (116)
++++|+||++||+ +|....|.+.++.+.+++.+ ++.++.++++.
T Consensus 34 k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 34 EVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp CCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 4689999999999 99999999999999998753 48888888873
No 213
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.20 E-value=3.8e-11 Score=75.04 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=62.9
Q ss_pred CeEEEEEE-cCCCHHHH-hhhHHHHHHHHHhccCcceE-EEEEeCCCcc---cccccCCcc-ccceEEEcCceeeeceee
Q psy3452 1 MFYSILFY-SPGCGYCK-KAKPEYVKAAEVLKDNHKVA-LAAIDCTEHG---PLCKEYDIK-GYPTFHHLALTIMIIRLA 73 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~-~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~---~~~~~~~v~-~~Pt~~~~~~~v~f~~~~ 73 (116)
++++|.|| ++||++|. ...|.+.++.+++++. .+. ++.++.+... +.++++++. .+|
T Consensus 36 k~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~--------------- 99 (162)
T 1tp9_A 36 KKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISVNDPFVMKAWAKSYPENKHVK--------------- 99 (162)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEESSCHHHHHHHHHTCTTCSSEE---------------
T ss_pred CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHHhcCCCCCeE---------------
Confidence 36899999 89999999 8999999999999765 466 7777766432 344555553 233
Q ss_pred EEEEeccCccchhhhcCCC-----------CCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCKEYDIK-----------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+.++++ .+++
T Consensus 100 ---~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i 139 (162)
T 1tp9_A 100 ---FLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKV 139 (162)
T ss_dssp ---EEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEE
T ss_pred ---EEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEE
Confidence 2225678899999986 279999998 5444
No 214
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.19 E-value=2.1e-11 Score=76.39 Aligned_cols=86 Identities=13% Similarity=0.074 Sum_probs=62.7
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
.+++|.|| ++||++|....|.++++.++ . .+.++.++.+.... .++++++..+|.+
T Consensus 47 k~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~---~~~vv~is~d~~~~~~~~~~~~~~~~~~~l---------------- 106 (166)
T 3p7x_A 47 KKKLISVVPSIDTGVCDQQTRKFNSDASK-E---EGIVLTISADLPFAQKRWCASAGLDNVITL---------------- 106 (166)
T ss_dssp SCEEEEECSCTTSHHHHHHHHHHHHHSCT-T---TSEEEEEESSCHHHHHHHHHHHTCSSCEEE----------------
T ss_pred CcEEEEEECCCCCCccHHHHHHHHHHhhc-C---CCEEEEEECCCHHHHHHHHHHcCCCceEEc----------------
Confidence 36889999 88999999999999998777 2 57888888775433 3445555333311
Q ss_pred EeccC-ccchhhhcCCCC------CCEEEEecCCcccCC
Q psy3452 77 IDCTE-HGPLCKEYDIKG------YPTFQYFHYFNKQSP 108 (116)
Q Consensus 77 v~~~~-~~~~~~~~~v~~------~Pt~~~~~~g~~~~~ 108 (116)
.+. +.++.+.|++.. .|+++++++.+++..
T Consensus 107 --~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~ 143 (166)
T 3p7x_A 107 --SDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVY 143 (166)
T ss_dssp --ECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEE
T ss_pred --cCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEE
Confidence 244 668999999986 899999976666533
No 215
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.18 E-value=3.1e-11 Score=76.63 Aligned_cols=85 Identities=11% Similarity=0.207 Sum_probs=63.0
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
+++|.|| ++||+.|...+|.+.++.+++++. .+.++.+..+... ..++++++. +|.
T Consensus 53 ~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~-f~~------------------ 112 (179)
T 3ixr_A 53 WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFT-FPL------------------ 112 (179)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCC-SCE------------------
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCc-eEE------------------
Confidence 6788898 999999999999999999999876 4778888777543 233444432 231
Q ss_pred eccCccchhhhcCCCC------------CCEEEEecCCccc
Q psy3452 78 DCTEHGPLCKEYDIKG------------YPTFQYFHYFNKQ 106 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~~------------~Pt~~~~~~g~~~ 106 (116)
-.+.+.++++.|++.. .|+++++++.+++
T Consensus 113 l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I 153 (179)
T 3ixr_A 113 VSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRI 153 (179)
T ss_dssp EECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBE
T ss_pred EECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEE
Confidence 1246778899999864 6999999766555
No 216
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.16 E-value=4e-11 Score=79.68 Aligned_cols=87 Identities=8% Similarity=0.078 Sum_probs=64.6
Q ss_pred CeEEEEEEc-CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----Cc--cccceEEEcCceeeec
Q psy3452 1 MFYSILFYS-PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DI--KGYPTFHHLALTIMII 70 (116)
Q Consensus 1 ~~v~v~F~a-~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v--~~~Pt~~~~~~~v~f~ 70 (116)
.+++|.||+ +||++|...+|.+.++.+++++. .+.++.+.++.... .++++ ++ -.+|
T Consensus 78 k~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp------------ 144 (240)
T 3qpm_A 78 KYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIP------------ 144 (240)
T ss_dssp SEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSC------------
T ss_pred CEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCcee------------
Confidence 378999999 99999999999999999999865 48888888776543 22222 11 1222
Q ss_pred eeeEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 145 ------~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I 180 (240)
T 3qpm_A 145 ------LLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVL 180 (240)
T ss_dssp ------EEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred ------EEeCchHHHHHHhCCccccCCCccceEEEEcCCCeE
Confidence 1225568899999998 78999999766655
No 217
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.16 E-value=3.3e-12 Score=79.65 Aligned_cols=86 Identities=10% Similarity=0.147 Sum_probs=57.2
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++++|.|| ++||++|...+|.+.++.+++++. .+.++.++.+... +.++++++. +|
T Consensus 31 k~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~~~~~~~~~~~~~~~-~p------------------ 90 (157)
T 4g2e_A 31 KVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDPPFSNKAFKEHNKLN-FT------------------ 90 (157)
T ss_dssp SCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSCHHHHHHHHHHTTCC-SE------------------
T ss_pred CeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccchhHHHHHHHHcCCc-EE------------------
Confidence 36889998 999999999999999998888776 4777778776543 334455542 22
Q ss_pred EeccCccchhhhcCCC-----------CCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIK-----------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.+++++|+|. ..|+++++++.++|
T Consensus 91 ~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I 131 (157)
T 4g2e_A 91 ILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKV 131 (157)
T ss_dssp EEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBE
T ss_pred EEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEE
Confidence 1236678899999884 46889999766654
No 218
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.15 E-value=3.2e-11 Score=76.24 Aligned_cols=83 Identities=12% Similarity=0.148 Sum_probs=58.6
Q ss_pred eEEEEEEcCCCHHHHhh-hHHHHHHHHHhccCcceE-EEEEeCCCc---ccccccCCcc-ccceEEEcCceeeeceeeEE
Q psy3452 2 FYSILFYSPGCGYCKKA-KPEYVKAAEVLKDNHKVA-LAAIDCTEH---GPLCKEYDIK-GYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~-~~~vd~~~~---~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~ 75 (116)
+++++||++||++|+.. +|.+.++.+++++. .+. ++.++.+.. ...++++++. .+|.+
T Consensus 46 vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l--------------- 109 (171)
T 2pwj_A 46 VVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAINDPYTVNAWAEKIQAKDAIEFY--------------- 109 (171)
T ss_dssp EEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESSCHHHHHHHHHHTTCTTTSEEE---------------
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCCHHHHHHHHHHhCCCCceEEE---------------
Confidence 56788999999999998 99999999998765 366 777777643 3345566653 44422
Q ss_pred EEeccCccchhhhcCCCC-----------CCEEEEecCC
Q psy3452 76 AIDCTEHGPLCKEYDIKG-----------YPTFQYFHYF 103 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~~-----------~Pt~~~~~~g 103 (116)
.+.+.++++.|++.. .|+.+++.+|
T Consensus 110 ---~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G 145 (171)
T 2pwj_A 110 ---GDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVVDG 145 (171)
T ss_dssp ---ECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEETT
T ss_pred ---ECCccHHHHHhCCccccccccCCcccceeEEEEECC
Confidence 256778888888752 4555666554
No 219
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.13 E-value=1.2e-10 Score=73.92 Aligned_cols=84 Identities=17% Similarity=0.109 Sum_probs=59.4
Q ss_pred EEEEEEcCCCHHHH-hhhHHHHHHHHHhccCcceEEEE-EeCCCc---ccccccCCcc-ccceEEEcCceeeeceeeEEE
Q psy3452 3 YSILFYSPGCGYCK-KAKPEYVKAAEVLKDNHKVALAA-IDCTEH---GPLCKEYDIK-GYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 3 v~v~F~a~wC~~C~-~~~~~~~~~~~~~~~~~~~~~~~-vd~~~~---~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
+++.||++||++|. +.+|.+.++.+++++.+ +.++. +..+.. .+.++++++. .+|
T Consensus 47 vL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g-v~vv~~iS~D~~~~~~~f~~~~~~~~~fp------------------ 107 (173)
T 3mng_A 47 VLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG-VQVVACLSVNDAFVTGEWGRAHKAEGKVR------------------ 107 (173)
T ss_dssp EEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT-CCEEEEEESSCHHHHHHHHHHTTCTTTCE------------------
T ss_pred EEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEEcCCCHHHHHHHHHHhCCCCceE------------------
Confidence 45556699999999 58999999999998764 55554 666543 3455566654 344
Q ss_pred EeccCccchhhhcCCC-------------CCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDIK-------------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v~-------------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+.++++ .++|
T Consensus 108 ~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I 149 (173)
T 3mng_A 108 LLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIV 149 (173)
T ss_dssp EEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEE
T ss_pred EEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEE
Confidence 2225678899999986 359999999 4444
No 220
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.05 E-value=1.2e-10 Score=78.05 Aligned_cols=87 Identities=9% Similarity=0.077 Sum_probs=64.1
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----Cc--cccceEEEcCceeeec
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DI--KGYPTFHHLALTIMII 70 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v--~~~Pt~~~~~~~v~f~ 70 (116)
.+++|+|| ++||+.|...+|.+.++.+++++. .+.++.|.++.... .++++ ++ -.+|
T Consensus 92 K~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp------------ 158 (254)
T 3tjj_A 92 KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIP------------ 158 (254)
T ss_dssp SEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSC------------
T ss_pred CeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccc------------
Confidence 36899999 999999999999999999999865 48888888876542 22222 11 1222
Q ss_pred eeeEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 159 ------~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I 194 (254)
T 3tjj_A 159 ------LLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGIL 194 (254)
T ss_dssp ------EEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBE
T ss_pred ------eeeCcHHHHHHHcCCccccCCCccceEEEECCCCeE
Confidence 1225567899999996 58999999766655
No 221
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.05 E-value=2.8e-10 Score=71.64 Aligned_cols=94 Identities=12% Similarity=0.030 Sum_probs=62.1
Q ss_pred CeEEEEEEcCCCH-HHHhhhHHHHHHHHHhccCc-ceEEEEEeCCC--c----ccccccCCccccceEEEcCceeeecee
Q psy3452 1 MFYSILFYSPGCG-YCKKAKPEYVKAAEVLKDNH-KVALAAIDCTE--H----GPLCKEYDIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~a~wC~-~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~--~----~~~~~~~~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++|+||++||+ .|....+.++++.+++...+ ++.++.+.++. . .+.++++++.. |. .
T Consensus 29 k~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~-~~------------w 95 (170)
T 3me7_A 29 KPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDG-KG------------W 95 (170)
T ss_dssp SCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCS-SS------------E
T ss_pred CEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCC-CC------------e
Confidence 4689999999997 69999999999999996422 57777777663 2 13344555443 21 1
Q ss_pred eEEEE-eccCccchhhhcC---------CCCCCEEEEecCCcccC
Q psy3452 73 ALAAI-DCTEHGPLCKEYD---------IKGYPTFQYFHYFNKQS 107 (116)
Q Consensus 73 ~~~~v-~~~~~~~~~~~~~---------v~~~Pt~~~~~~g~~~~ 107 (116)
.+... +.++..++++.|+ +...|+++++++.+++.
T Consensus 96 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~ 140 (170)
T 3me7_A 96 KVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIK 140 (170)
T ss_dssp EEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEE
T ss_pred EEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEE
Confidence 12111 2234566777766 45668999997666653
No 222
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.05 E-value=6.1e-12 Score=79.04 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=62.3
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAAI 77 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v 77 (116)
++++.|| ++||++|...+|.+.++.+++++. .+.++.++.+... ..++++++. +| +
T Consensus 35 ~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~-fp------------------~ 94 (164)
T 4gqc_A 35 PAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLA-FN------------------L 94 (164)
T ss_dssp CEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCC-SE------------------E
T ss_pred EEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcc-cc------------------e
Confidence 5777887 999999999999999999998776 4777788776543 334454432 22 2
Q ss_pred eccCccchhhhcCCC----------CCCEEEEecCCccc
Q psy3452 78 DCTEHGPLCKEYDIK----------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 78 ~~~~~~~~~~~~~v~----------~~Pt~~~~~~g~~~ 106 (116)
-.+.+.++++.|||. ..|+++++++.++|
T Consensus 95 l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I 133 (164)
T 4gqc_A 95 LSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTV 133 (164)
T ss_dssp EECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBE
T ss_pred eecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEE
Confidence 236678899999984 47999999766665
No 223
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.05 E-value=2.7e-10 Score=72.12 Aligned_cols=43 Identities=7% Similarity=0.168 Sum_probs=37.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
++++|+||++||++|+..+|.+.++.+++++. .+.++.++++.
T Consensus 39 k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~ 81 (180)
T 3kij_A 39 KVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQ 81 (180)
T ss_dssp SEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCC
T ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCc
Confidence 47999999999999999999999999999875 38888887653
No 224
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.01 E-value=9.9e-10 Score=71.89 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=36.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+|||+||++|+ .+|.++++.+++++. .+.++.+.++
T Consensus 57 Kvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 57 KHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp SEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 4799999999999999 899999999999875 4888888865
No 225
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.01 E-value=3.9e-10 Score=75.33 Aligned_cols=85 Identities=8% Similarity=0.035 Sum_probs=62.3
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc-------cccCCc-cccceEEEcCceeeeceeeE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL-------CKEYDI-KGYPTFHHLALTIMIIRLAL 74 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~-------~~~~~v-~~~Pt~~~~~~~v~f~~~~~ 74 (116)
+++.||++||+.|....+.+.++.+++++. ++.++.++++..... .+..+. -.+|
T Consensus 37 VL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fP---------------- 99 (249)
T 3a2v_A 37 VLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFP---------------- 99 (249)
T ss_dssp EEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSC----------------
T ss_pred EEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCcee----------------
Confidence 566889999999999999999999999865 588899988764321 111111 1122
Q ss_pred EEEeccCccchhhhcCCC-------CCCEEEEecCCccc
Q psy3452 75 AAIDCTEHGPLCKEYDIK-------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 75 ~~v~~~~~~~~~~~~~v~-------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 100 --il~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I 136 (249)
T 3a2v_A 100 --IIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVI 136 (249)
T ss_dssp --EEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBE
T ss_pred --EEECCchHHHHHhCCccccCCCcccceEEEECCCCeE
Confidence 2235678899999997 89999999765554
No 226
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.00 E-value=7.4e-10 Score=72.83 Aligned_cols=85 Identities=14% Similarity=0.014 Sum_probs=61.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---ccc----------CCccccceEEEcCceee
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CKE----------YDIKGYPTFHHLALTIM 68 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~~----------~~v~~~Pt~~~~~~~v~ 68 (116)
++++.||++||+.|....+.+.++.+++++. ++.++.++++..... .++ .++ .+|
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~-~fp---------- 101 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKL-PFP---------- 101 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCC-SSC----------
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCc-Ccc----------
Confidence 3566679999999999999999999999765 588888888764322 121 222 223
Q ss_pred eceeeEEEEeccCccchhhhcCCC------------CCCEEEEecCCccc
Q psy3452 69 IIRLALAAIDCTEHGPLCKEYDIK------------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 69 f~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 102 --------il~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I 143 (224)
T 1prx_A 102 --------IIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKL 143 (224)
T ss_dssp --------EEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBE
T ss_pred --------eeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEE
Confidence 1125677899999874 37999999766655
No 227
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.97 E-value=7.5e-10 Score=61.27 Aligned_cols=50 Identities=10% Similarity=0.211 Sum_probs=37.5
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccc---cCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCK---EYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~ 61 (116)
++.|+++||++|+++.+.+++. .+.+..+|+++++++.+ ++++.++|++.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~ 55 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI 55 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE
Confidence 4669999999999999988862 36677788887654433 47777888773
No 228
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.96 E-value=7.4e-10 Score=73.32 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=62.5
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccc------cC--CccccceEEEcCceeee
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCK------EY--DIKGYPTFHHLALTIMI 69 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~------~~--~v~~~Pt~~~~~~~v~f 69 (116)
++++.|| ++||+.|...++.+.++.+++++. ++.++.++++.... .++ .+ ++ .+|
T Consensus 31 ~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~-~fp----------- 97 (233)
T 2v2g_A 31 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDNVADHKEWSEDVKCLSGVKGDM-PYP----------- 97 (233)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSC-SSC-----------
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCC-ceE-----------
Confidence 6888998 999999999999999999999765 58888888876432 222 22 22 223
Q ss_pred ceeeEEEEeccCccchhhhcCCC------------CCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIK------------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 98 -------il~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I 139 (233)
T 2v2g_A 98 -------IIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKL 139 (233)
T ss_dssp -------EEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBE
T ss_pred -------EEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEE
Confidence 1225677899999985 57999999766655
No 229
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.89 E-value=1.9e-09 Score=67.81 Aligned_cols=30 Identities=20% Similarity=0.473 Sum_probs=27.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhcc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKD 31 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~ 31 (116)
++++.||.+|||+|+++.|.++++.+++++
T Consensus 24 v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 24 VTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999888653
No 230
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.89 E-value=1.1e-09 Score=71.82 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=60.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc---cc-------cCCccccceEEEcCceeeece
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL---CK-------EYDIKGYPTFHHLALTIMIIR 71 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~---~~-------~~~v~~~Pt~~~~~~~v~f~~ 71 (116)
++++.||++||+.|....+.+.++.+++++. ++.++.++++..... .+ .+++ .+|
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~-~fp------------- 98 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL-NCKLIGFSCNSKESHDKWIEDIKYYGKLNKW-EIP------------- 98 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHHTCSCC-CCC-------------
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCC-cce-------------
Confidence 3455568999999999999999999999765 588888888754321 11 2222 223
Q ss_pred eeEEEEeccCccchhhhcCCC------------CCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIK------------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.|++. ..|+++++++.+++
T Consensus 99 -----il~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I 140 (220)
T 1xcc_A 99 -----IVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKI 140 (220)
T ss_dssp -----EEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBE
T ss_pred -----eEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEE
Confidence 1225677889999983 37999999766665
No 231
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.87 E-value=2.9e-09 Score=57.86 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=36.8
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccc---cCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCK---EYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~---~~~v~~~Pt~~ 61 (116)
++.|+++||++|++..+.+++. .+.+..+|.+.++...+ ++++.++|+++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~ 55 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVE 55 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEE
Confidence 4669999999999999988863 35667777777654443 56667777665
No 232
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.86 E-value=8.7e-10 Score=71.99 Aligned_cols=26 Identities=23% Similarity=0.511 Sum_probs=23.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHH
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAE 27 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~ 27 (116)
++++.||++||++|+++.|.++++.+
T Consensus 88 ~~vv~F~d~~Cp~C~~~~~~l~~l~~ 113 (216)
T 1eej_A 88 HVITVFTDITCGYCHKLHEQMADYNA 113 (216)
T ss_dssp EEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999998865
No 233
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.85 E-value=2.4e-09 Score=62.08 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=34.5
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-------ccccccCCccccceE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-------GPLCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~ 60 (116)
++.|+++||++|+++.+.++++...++ . +..+|++.+ +.+.+.+++.++|++
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV 72 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE
Confidence 577999999999999999987544332 2 344455443 134555666666665
No 234
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.81 E-value=2.4e-09 Score=63.31 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=35.8
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-------cccccCCccccceEE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-------PLCKEYDIKGYPTFH 61 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~ 61 (116)
.++.|+++||++|+++.+.+++..... + . +..+|++.++ .+.+.+++.++|+++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~--~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~ 80 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR-G--A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIF 80 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT-T--S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc-C--c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE
Confidence 367799999999999999887542221 0 1 5666666553 455566666666653
No 235
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.80 E-value=3.6e-08 Score=61.99 Aligned_cols=44 Identities=14% Similarity=0.307 Sum_probs=35.9
Q ss_pred CeEEEEEEcCCCH-HHHhhhHHHHHHHHHhccCc-ceEEEEEeCCC
Q psy3452 1 MFYSILFYSPGCG-YCKKAKPEYVKAAEVLKDNH-KVALAAIDCTE 44 (116)
Q Consensus 1 ~~v~v~F~a~wC~-~C~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~ 44 (116)
++++|+||.+||+ .|...++.+.++.+.+++.+ ++.++.+.++.
T Consensus 33 k~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp 78 (170)
T 4hde_A 33 KVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP 78 (170)
T ss_dssp SCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc
Confidence 4789999999996 79999999999888886544 67777777663
No 236
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.79 E-value=2e-09 Score=69.51 Aligned_cols=42 Identities=14% Similarity=0.137 Sum_probs=37.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
+++|+||+.||+||+++.|.+ +++.+.+++ .+.+.+++.+.+
T Consensus 115 ~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~ 159 (197)
T 1un2_A 115 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFM 159 (197)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSS
T ss_pred CEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcC
Confidence 579999999999999999999 999999987 688999988765
No 237
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.75 E-value=1.4e-08 Score=66.03 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=35.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++|+|||+||++| ..+|.++++.+++++. .+.++.+.++
T Consensus 39 Kvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d 79 (207)
T 2r37_A 39 KYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCN 79 (207)
T ss_dssp SEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECc
Confidence 479999999999999 6899999999999875 4888888765
No 238
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.72 E-value=4.9e-09 Score=59.09 Aligned_cols=52 Identities=27% Similarity=0.481 Sum_probs=35.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC--CcccccccC-CccccceE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT--EHGPLCKEY-DIKGYPTF 60 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~-~v~~~Pt~ 60 (116)
|.-++.|+++||++|+++.+.+++. .+.+..+|++ ..+++.+.+ ++..+|++
T Consensus 5 m~~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l 59 (89)
T 2klx_A 5 MKEIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQI 59 (89)
T ss_dssp CCCEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEE
T ss_pred cceEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEE
Confidence 4457789999999999999988864 2455566665 333444555 55666655
No 239
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.69 E-value=2.3e-08 Score=65.75 Aligned_cols=81 Identities=11% Similarity=0.025 Sum_probs=57.0
Q ss_pred eEEEEEEcCC-CHHHH-----hhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeecee
Q psy3452 2 FYSILFYSPG-CGYCK-----KAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 2 ~v~v~F~a~w-C~~C~-----~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~ 72 (116)
+++|.||++| |+.|. ..++.+.+. +. .+.++.|+.+... ..++++++..+|
T Consensus 50 ~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~---gv~VvgIS~Ds~~~~~~f~~~~gl~~fp-------------- 109 (224)
T 3keb_A 50 PKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP---HLKLIVITVDSPSSLARARHEHGLPNIA-------------- 109 (224)
T ss_dssp CEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT---TSEEEEEESSCHHHHHHHHHHHCCTTCE--------------
T ss_pred cEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC---CCEEEEEECCCHHHHHHHHHHcCCCCce--------------
Confidence 6899999988 99999 777777665 42 5778888776532 344555554333
Q ss_pred eEEEEeccC-ccchhhhcCCCC---------CCEEEEecCCccc
Q psy3452 73 ALAAIDCTE-HGPLCKEYDIKG---------YPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~-~~~~~~~~~v~~---------~Pt~~~~~~g~~~ 106 (116)
+-.+. +.++++.|++.. .|+.+++++.++|
T Consensus 110 ----lLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I 149 (224)
T 3keb_A 110 ----LLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVV 149 (224)
T ss_dssp ----EEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBE
T ss_pred ----EEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEE
Confidence 12244 588999999875 7999999766554
No 240
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=2e-08 Score=60.66 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=36.4
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc---c----cccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH---G----PLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~ 61 (116)
++.|+++||++|+++.+.++++. +.+..+|++.+ + .+++.+++..+|+++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 34499999999999999998752 34455666554 3 266778888888874
No 241
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.67 E-value=2e-08 Score=61.95 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=34.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc---c----cccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH---G----PLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~----~~~~~~~v~~~Pt~~ 61 (116)
++.|+++||++|+++.+.++++. +.+..+|++.+ + .+++.+++..+|+++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 34499999999999999998752 33444555543 2 256677778888774
No 242
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.65 E-value=1.2e-08 Score=60.72 Aligned_cols=52 Identities=13% Similarity=0.250 Sum_probs=34.4
Q ss_pred EEEEEcCCCHHHHhh-hHHHHHHHHHhccCcceEEEEEeCCCcc-------cccccCCccccceE
Q psy3452 4 SILFYSPGCGYCKKA-KPEYVKAAEVLKDNHKVALAAIDCTEHG-------PLCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~ 60 (116)
++.|+++||++|+++ .+.+++... . .+.+..+|++.++ ++.+.+++.++|++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~--~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v 86 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---P--RSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI 86 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---C--GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---C--CCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE
Confidence 566999999999998 777765331 1 3566666666553 34555666666655
No 243
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.65 E-value=2.5e-08 Score=64.86 Aligned_cols=26 Identities=15% Similarity=0.400 Sum_probs=23.5
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHH
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAE 27 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~ 27 (116)
++++.|+.+||++|+++.|.++++.+
T Consensus 88 ~~vv~F~d~~Cp~C~~~~~~l~~~~~ 113 (211)
T 1t3b_A 88 HVVTVFMDITCHYCHLLHQQLKEYND 113 (211)
T ss_dssp EEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred EEEEEEECCCCHhHHHHHHHHHHHHh
Confidence 57899999999999999999998654
No 244
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.64 E-value=5.1e-08 Score=62.13 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=34.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++.||.+||++|+.+.|.+.++.+.+++ .+.+......
T Consensus 27 ~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 66 (192)
T 3h93_A 27 IEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPAL 66 (192)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEehh
Confidence 589999999999999999999999999887 5777666553
No 245
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.62 E-value=1.2e-07 Score=60.13 Aligned_cols=83 Identities=10% Similarity=0.092 Sum_probs=59.9
Q ss_pred eEEEEEEcCCCHHHHh-hhHHHHHHHHHhccCcce-EEEEEeCCCc---ccccccCCcc-ccceEEEcCceeeeceeeEE
Q psy3452 2 FYSILFYSPGCGYCKK-AKPEYVKAAEVLKDNHKV-ALAAIDCTEH---GPLCKEYDIK-GYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~-~~~~~~~~~~~~~~~~~~-~~~~vd~~~~---~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~ 75 (116)
+|++.||+.||+.|.. .+|.+.+..++++..+ + .++.+..+.. ...+++.++. .+|.
T Consensus 50 vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g-~d~VigIS~D~~~~~~~f~~~~~l~~~f~l---------------- 112 (176)
T 4f82_A 50 VVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG-IDEIWCVSVNDAFVMGAWGRDLHTAGKVRM---------------- 112 (176)
T ss_dssp EEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT-CCEEEEEESSCHHHHHHHHHHTTCTTTSEE----------------
T ss_pred EEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC-CCEEEEEeCCCHHHHHHHHHHhCCCCCceE----------------
Confidence 4567888999999999 9999999999998653 6 7777777753 3455566654 3332
Q ss_pred EEeccCccchhhhcCCC-----------CCCEEEEecCC
Q psy3452 76 AIDCTEHGPLCKEYDIK-----------GYPTFQYFHYF 103 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g 103 (116)
-.+.+.++++.||+. +.|+.+++++|
T Consensus 113 --LsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG 149 (176)
T 4f82_A 113 --MADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGG 149 (176)
T ss_dssp --EECTTCHHHHHHTCEEECGGGTCCEEECCEEEEEETT
T ss_pred --EEcCchHHHHHhCCCccccccCCCcccccEEEEEcCC
Confidence 225678888888873 35778888555
No 246
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.59 E-value=4.5e-08 Score=55.32 Aligned_cols=52 Identities=23% Similarity=0.525 Sum_probs=36.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTF 60 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~ 60 (116)
|.-++.|+++||++|+++.+.+++. .+.+..+|+++++. +.+.+++..+|++
T Consensus 5 m~~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l 60 (92)
T 2khp_A 5 MVDVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQI 60 (92)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE
T ss_pred cccEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE
Confidence 3457789999999999999888763 35566677766543 3335666777754
No 247
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.58 E-value=7.2e-08 Score=55.66 Aligned_cols=49 Identities=10% Similarity=0.192 Sum_probs=34.8
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccc----cC-CccccceE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCK----EY-DIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~----~~-~v~~~Pt~ 60 (116)
++.|+++||++|+++.+.+++. .+.+..+|++.+++..+ .. +...+|++
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i 71 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI 71 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE
T ss_pred EEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE
Confidence 5669999999999999998864 35566677776654332 22 66666765
No 248
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.52 E-value=2.4e-07 Score=59.13 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=36.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
++++.||++||++|+++.|.++++.+.+++ .+.+..++..-
T Consensus 27 ~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~~ 67 (195)
T 3hd5_A 27 IEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIAF 67 (195)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECCS
T ss_pred eEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEeccc
Confidence 689999999999999999999999999987 68888888763
No 249
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.50 E-value=3.5e-08 Score=55.74 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=20.6
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHH
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKA 25 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~ 25 (116)
|.-++.|+++||++|++..+.+++.
T Consensus 11 M~~v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 11 MAEVLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp CSSSEEEECTTCHHHHHHHHHHHHH
T ss_pred CceEEEEECCCChHHHHHHHHHHHc
Confidence 3345679999999999999888875
No 250
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.47 E-value=2.3e-07 Score=50.98 Aligned_cols=50 Identities=16% Similarity=0.335 Sum_probs=33.6
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~~ 61 (116)
++.|+++||++|+++.+.+++. .+.+..+|++.++. +.+.+++..+|++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK--------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 5678999999999999888763 24455566665432 33455666666653
No 251
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.43 E-value=3.7e-07 Score=60.44 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=29.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~ 42 (116)
.+++.|+.+||++|+++.+.++++.+. + ++.+..+..
T Consensus 99 ~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~ 135 (241)
T 1v58_A 99 VIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLV 135 (241)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEEC
T ss_pred eEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEEC
Confidence 578999999999999999999887664 2 466665554
No 252
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.42 E-value=1.5e-07 Score=55.21 Aligned_cols=49 Identities=14% Similarity=0.322 Sum_probs=32.1
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc----cc----ccccCCccccceE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH----GP----LCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~----~~~~~~v~~~Pt~ 60 (116)
++.|+++||++|++..+.+++. .+.+..+|++.. ++ +.+..+...+|++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i 77 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL--------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV 77 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEECCCChhHHHHHHHHHHc--------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE
Confidence 5669999999999999998863 234445555542 11 3334466666666
No 253
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.41 E-value=5.3e-08 Score=59.66 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=34.4
Q ss_pred ce-eeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IR-LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++ +.++++|.+++.+++++|+|++.||+++|++|+.+
T Consensus 67 g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v 104 (140)
T 2qgv_A 67 DYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYR 104 (140)
T ss_dssp TSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEE
T ss_pred CCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEE
Confidence 46 89999999999999999999999999999999765
No 254
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.41 E-value=2.1e-07 Score=53.97 Aligned_cols=48 Identities=23% Similarity=0.378 Sum_probs=33.4
Q ss_pred EEEEc-----CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceE
Q psy3452 5 ILFYS-----PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTF 60 (116)
Q Consensus 5 v~F~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~ 60 (116)
+.|++ +||++|+++.+.+++. .+.+..+|+++++. +.+.++...+|++
T Consensus 20 vvf~~g~~~~~~C~~C~~~~~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v 76 (105)
T 2yan_A 20 MLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL 76 (105)
T ss_dssp EEEESBCSSSBCTTHHHHHHHHHHHH--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred EEEEecCCCCCCCccHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 34777 9999999999998865 35666777776654 2334566666665
No 255
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.41 E-value=6.7e-07 Score=57.26 Aligned_cols=42 Identities=21% Similarity=0.304 Sum_probs=37.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
++++.|++.||++|+++.|.++++.+.+++ .+.+..+...-.
T Consensus 26 v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~~~ 67 (193)
T 3hz8_A 26 VEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVVWQ 67 (193)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECCCS
T ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCCCC
Confidence 589999999999999999999999999987 688888887643
No 256
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.40 E-value=1e-06 Score=57.59 Aligned_cols=89 Identities=6% Similarity=-0.002 Sum_probs=64.5
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccC----CccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEY----DIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~----~v~~~Pt~~~~~~~v~f~~~ 72 (116)
+++++.|| +.||+.|....+.+++..+++++. ++.++.++++.... .++.. ++..+|
T Consensus 53 K~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~-g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~-------------- 117 (216)
T 3sbc_A 53 KYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ-GAQVLFASTDSEYSLLAWTNIPRKEGGLGPIN-------------- 117 (216)
T ss_dssp SEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCS--------------
T ss_pred CeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC-CceEEEeecCchhhHHHHHHHHHHhCCccCcc--------------
Confidence 36889999 999999999999999999999876 48888888876432 22221 222211
Q ss_pred eEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
..+-.+.+.++++.|++- ..++++++++.++|
T Consensus 118 --fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~I 155 (216)
T 3sbc_A 118 --IPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVI 155 (216)
T ss_dssp --SCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBE
T ss_pred --cceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeE
Confidence 123347889999999983 46889999777665
No 257
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.39 E-value=5.2e-07 Score=52.13 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=19.5
Q ss_pred EEEEEcCCCHHHHhhhHHHHHH
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKA 25 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~ 25 (116)
++.|+++||++|+++.+.+++.
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHc
Confidence 5679999999999999999875
No 258
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.37 E-value=3e-07 Score=52.44 Aligned_cols=54 Identities=17% Similarity=0.317 Sum_probs=39.8
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccccc-----CCccccceEEEcCc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKE-----YDIKGYPTFHHLAL 65 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~-----~~v~~~Pt~~~~~~ 65 (116)
++.|+++|||+|.+....+++. .+.+..+|++++++..+. .|.+.+|++++-++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg 64 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADG 64 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETTS
T ss_pred EEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCC
Confidence 5679999999999998888751 577888898887654332 26677888765444
No 259
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.37 E-value=1.9e-07 Score=54.36 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=33.4
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+++.++.+|++++.+++++|+|+++||+++|++|+.+
T Consensus 50 ~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v 86 (105)
T 3zzx_A 50 SDVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKL 86 (105)
T ss_dssp TTEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE
T ss_pred CCeEEEEEecccCHHHHHHcCCCeecEEEEEECCEEE
Confidence 3577899999999999999999999999999998765
No 260
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.37 E-value=1.8e-07 Score=57.04 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=34.6
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+++.++++|.+++.+++++|+|++.||+++|++|+.+
T Consensus 66 ~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v 102 (137)
T 2qsi_A 66 GRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTL 102 (137)
T ss_dssp TTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEE
T ss_pred CCcEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEE
Confidence 5789999999999999999999999999999999765
No 261
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.27 E-value=4e-07 Score=50.72 Aligned_cols=52 Identities=17% Similarity=0.203 Sum_probs=32.2
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc----ccccccCCc-----cccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH----GPLCKEYDI-----KGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v-----~~~Pt~~ 61 (116)
++.|+++||++|++....+++.. - .+....+|...+ +++.+..+. ..+|++.
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~~~----i--~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~ 66 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEENN----I--AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIF 66 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT----C--CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEE
T ss_pred EEEEEcCCChhHHHHHHHHHHcC----C--CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEE
Confidence 66799999999999988887532 1 344555554433 234444444 5555553
No 262
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.26 E-value=2.9e-06 Score=55.45 Aligned_cols=60 Identities=17% Similarity=0.290 Sum_probs=48.1
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC--cccccccCCcc--ccceEEEcC
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE--HGPLCKEYDIK--GYPTFHHLA 64 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~--~~Pt~~~~~ 64 (116)
+++.|..+||+.|.++.+.++++++.+++ ++.++.+|.+. ....++.+|+. ..|++.+++
T Consensus 134 ~~l~f~~~~~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~ 197 (227)
T 4f9z_D 134 HLLLIMNKASPEYEENMHRYQKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQ 197 (227)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEE
T ss_pred EEEEEEcCCcchHHHHHHHHHHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEE
Confidence 45667789999999999999999999988 68888888864 45566777776 677777655
No 263
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.26 E-value=5.4e-06 Score=54.17 Aligned_cols=92 Identities=17% Similarity=0.300 Sum_probs=72.1
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce---------------
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT--------------- 66 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~--------------- 66 (116)
+++|-|+++|| ....+.+.++++.+. .+.|+.. .+++++++++++. |++++|++.
T Consensus 29 v~vVgff~~~~---~~~~~~f~~~A~~l~---~~~F~~t---~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~ 98 (227)
T 4f9z_D 29 VAVIGFFQDLE---IPAVPILHSMVQKFP---GVSFGIS---TDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESI 98 (227)
T ss_dssp EEEEEECSCSC---STHHHHHHHHTTTCT---TSEEEEE---CCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTC
T ss_pred eEEEEEecCCC---chhHHHHHHHHHhCC---CceEEEE---CCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCC
Confidence 57899999995 568899999999994 5777764 4677889999987 999887752
Q ss_pred -------------------------------------eee-----------------------ceeeEEEEecc--Cccc
Q psy3452 67 -------------------------------------IMI-----------------------IRLALAAIDCT--EHGP 84 (116)
Q Consensus 67 -------------------------------------v~f-----------------------~~~~~~~v~~~--~~~~ 84 (116)
+.| +++.++.+|++ .+..
T Consensus 99 ~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~ 178 (227)
T 4f9z_D 99 DATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGK 178 (227)
T ss_dssp CHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHH
T ss_pred CHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHH
Confidence 111 56888989986 4667
Q ss_pred hhhhcCCC--CCCEEEEecCC
Q psy3452 85 LCKEYDIK--GYPTFQYFHYF 103 (116)
Q Consensus 85 ~~~~~~v~--~~Pt~~~~~~g 103 (116)
+.+.||++ .+|++.+++.+
T Consensus 179 ~l~~fgl~~~~~P~~~i~~~~ 199 (227)
T 4f9z_D 179 VISFFKLKESQLPALAIYQTL 199 (227)
T ss_dssp HHHHTTCCGGGCSEEEEEESS
T ss_pred HHHHcCCCcccCCEEEEEECC
Confidence 88999998 89999999643
No 264
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.20 E-value=1.1e-06 Score=61.49 Aligned_cols=43 Identities=9% Similarity=0.259 Sum_probs=38.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
.+.++++||+.+.++|++|+|+++||+.+|++|+. ..|.|..+
T Consensus 69 ~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~---~~y~G~~~ 111 (367)
T 3us3_A 69 GVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEV---IEYDGEFS 111 (367)
T ss_dssp TEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEE---EECCSCCS
T ss_pred CceEEEEeCcccHHHHHHcCCCcCceEEEEECCcE---EEeCCCCC
Confidence 47889999999999999999999999999998754 58988764
No 265
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.19 E-value=8.1e-07 Score=56.68 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=33.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
+++|.|++.|||+|+++.|.+ .++.+.+++ ++.+...+..-
T Consensus 16 ~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 16 PAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 578999999999999999986 688888876 56666666553
No 266
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=98.18 E-value=4.8e-07 Score=54.57 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=32.7
Q ss_pred EEEEEcCCCHHHHhh-hHHHHHHHHHhccCcceEEEEEeCCCc-------ccccccCCccccceE
Q psy3452 4 SILFYSPGCGYCKKA-KPEYVKAAEVLKDNHKVALAAIDCTEH-------GPLCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~ 60 (116)
++.|+++||++|++. .+.+++.... .+.+..+|++.+ +.+.+.++...+|++
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~-----~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP-----KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC-----GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc-----CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE
Confidence 567999999999999 7777654211 134444444433 234555666667765
No 267
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.17 E-value=2.3e-06 Score=50.37 Aligned_cols=51 Identities=14% Similarity=0.209 Sum_probs=33.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-------cccccCCccccceEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-------PLCKEYDIKGYPTFHH 62 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-------~~~~~~~v~~~Pt~~~ 62 (116)
++.|+++|||+|.+..+.+++. .+.+..+|++..+ .+.+..+...+|++.+
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~--------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi 76 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL--------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV 76 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc--------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE
Confidence 4559999999999999888863 2445555655421 2344556667777643
No 268
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.14 E-value=7.7e-07 Score=54.49 Aligned_cols=43 Identities=9% Similarity=0.206 Sum_probs=33.8
Q ss_pred ceee--EEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 70 IRLA--LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 70 ~~~~--~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
+++. ++++|++.+.+++++|+|+++||+++|++|+.+ ..+.|.
T Consensus 66 ~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v--~~~~G~ 110 (142)
T 2es7_A 66 PQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLR--GALSGI 110 (142)
T ss_dssp TTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC------CEESC
T ss_pred cccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEE--EEEeCC
Confidence 3567 899999999999999999999999999888664 345554
No 269
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.14 E-value=2.5e-06 Score=54.18 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=33.9
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+++.++++|.+++.+++++|+|+++||+++|++|+..
T Consensus 80 ~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 80 SLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp CCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGG
T ss_pred CCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCC
Confidence 3689999999999999999999999999999998653
No 270
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.06 E-value=2.1e-06 Score=49.24 Aligned_cols=37 Identities=14% Similarity=0.042 Sum_probs=24.3
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 48 ~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 48 NYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp TTEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 4678899999999999999999999999999888654
No 271
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.06 E-value=3.6e-06 Score=49.93 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=34.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 67 ~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 108 (123)
T 1oaz_A 67 KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGA 108 (123)
T ss_dssp -CEEEEEETTSCTTTGGGGTCCBSSEEEEEESSSEE--EEEESC
T ss_pred CeEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEE--EEEeCC
Confidence 578899999999999999999999999999777653 234454
No 272
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.06 E-value=4.6e-06 Score=57.50 Aligned_cols=82 Identities=12% Similarity=0.228 Sum_probs=57.6
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---cccccCCccccceEEEcCceeeeceeeEEE
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKEYDIKGYPTFHHLALTIMIIRLALAA 76 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~ 76 (116)
++|+++|| +.||+.|...++.+.+ ..+ . .+.++.++.+... .+++++++ .+|
T Consensus 25 k~vvl~F~p~~~tp~C~~e~~~~~~--~~~-~--~~~v~gis~D~~~~~~~f~~~~~l-~fp------------------ 80 (322)
T 4eo3_A 25 KYTILFFFPKAGTSGSTREAVEFSR--ENF-E--KAQVVGISRDSVEALKRFKEKNDL-KVT------------------ 80 (322)
T ss_dssp SEEEEEECSSTTSHHHHHHHHHHHH--SCC-T--TEEEEEEESCCHHHHHHHHHHHTC-CSE------------------
T ss_pred CeEEEEEECCCCCCCCHHHHHHHHH--Hhh-C--CCEEEEEeCCCHHHHHHHHHhhCC-ceE------------------
Confidence 46899999 6899999988777754 122 1 5788888876543 34556554 223
Q ss_pred EeccCccchhhhcCC----CCCCEEEEecCCccc
Q psy3452 77 IDCTEHGPLCKEYDI----KGYPTFQYFHYFNKQ 106 (116)
Q Consensus 77 v~~~~~~~~~~~~~v----~~~Pt~~~~~~g~~~ 106 (116)
+-.+.+.++++.||| ...|+.+++++.++|
T Consensus 81 ~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i 114 (322)
T 4eo3_A 81 LLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFV 114 (322)
T ss_dssp EEECTTCHHHHHTTCEETTEECCEEEEECTTSBE
T ss_pred EEEcCchHHHHhcCCCCCCcCccEEEEECCCCEE
Confidence 223678899999999 457899999777665
No 273
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.04 E-value=1.1e-05 Score=50.57 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=32.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~ 42 (116)
+++|.|..-.||+|+++.+.+.++.+.+.+...+.+..+..
T Consensus 23 ~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~ 63 (184)
T 4dvc_A 23 PVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSF 63 (184)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSS
T ss_pred CEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCC
Confidence 57899999999999999999999999998744444444433
No 274
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.04 E-value=3.3e-06 Score=50.11 Aligned_cols=59 Identities=12% Similarity=0.148 Sum_probs=43.4
Q ss_pred EcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 8 YSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 8 ~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
|-+.|..=......+.+........+.+.++++|++++++++++++|+++||+++|+++
T Consensus 44 wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 102 (127)
T 3h79_A 44 WSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRI 102 (127)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSS
T ss_pred ccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCC
Confidence 34456555555555544433322223799999999999999999999999999999875
No 275
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=4e-06 Score=49.80 Aligned_cols=43 Identities=30% Similarity=0.546 Sum_probs=36.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
++.++.+|++.+.+++++|+|+++||+++|++|+.+ ..|.|..
T Consensus 61 ~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~~~G~~ 103 (133)
T 1x5d_A 61 KVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESP--VDYDGGR 103 (133)
T ss_dssp SEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEEE--EEECSCC
T ss_pred cEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCce--EEecCCC
Confidence 478899999999999999999999999999887643 5566653
No 276
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.03 E-value=3.2e-06 Score=48.62 Aligned_cols=42 Identities=21% Similarity=0.409 Sum_probs=35.3
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.++.++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 54 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~~~g~ 95 (111)
T 3gnj_A 54 SFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYK--GKMAGD 95 (111)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEE--EEEESS
T ss_pred ceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEE--EEEecc
Confidence 578899999999999999999999999999888654 344443
No 277
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.01 E-value=3.4e-06 Score=58.42 Aligned_cols=43 Identities=7% Similarity=0.210 Sum_probs=37.7
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
++.++.+||+.+.+++++|+|+++||+++|++|+ ...|.|..+
T Consensus 67 ~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~---~~~~~G~~~ 109 (350)
T 1sji_A 67 DIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR---TIEFDGEFA 109 (350)
T ss_dssp SEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE---EEEECSCCC
T ss_pred CcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc---EEEecCCCC
Confidence 4788999999999999999999999999998886 257888753
No 278
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.01 E-value=5.1e-06 Score=49.35 Aligned_cols=43 Identities=16% Similarity=0.268 Sum_probs=36.2
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
.++.+..++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 73 ~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 115 (128)
T 3ul3_B 73 KRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML--ARKDHF 115 (128)
T ss_dssp GGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE--EEESSC
T ss_pred CCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE--EEecCC
Confidence 4689999999999999999999999999999887654 345554
No 279
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.98 E-value=5e-06 Score=48.21 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=34.8
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 49 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 90 (112)
T 2voc_A 49 KLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVV--ETSVGF 90 (112)
T ss_dssp TCEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEEE--EEEESC
T ss_pred CcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEE--EEEeCC
Confidence 578899999999999999999999999999777653 344554
No 280
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.98 E-value=5.4e-06 Score=50.40 Aligned_cols=44 Identities=9% Similarity=0.196 Sum_probs=37.0
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
.++.+..+|++.+.+++++|+|+++||++++++|+.+ ..|.|..
T Consensus 86 ~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~~ 129 (148)
T 3p2a_A 86 GKVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMI--DMLNGAV 129 (148)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEESSCC
T ss_pred CceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEE--EEEeCCC
Confidence 4688999999999999999999999999999888664 3456643
No 281
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.97 E-value=9.5e-06 Score=48.03 Aligned_cols=44 Identities=23% Similarity=0.557 Sum_probs=37.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
.+.++.+|++.+.+++++|+|+++||+++|++|+.+ ...|.|..
T Consensus 67 ~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~-~~~~~G~~ 110 (130)
T 2dml_A 67 VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNK-PEDYQGGR 110 (130)
T ss_dssp TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTS-CEECCSCC
T ss_pred ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCe-EEEeecCC
Confidence 478889999999999999999999999999887762 35677754
No 282
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.97 E-value=4.7e-06 Score=47.44 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=35.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
.+.+..++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~--~~~~g~ 92 (106)
T 3die_A 51 KADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPV--DKVVGF 92 (106)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEE--EEEESC
T ss_pred CcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEE--EEEeCC
Confidence 478899999999999999999999999999887654 244454
No 283
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.97 E-value=6.6e-06 Score=46.88 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=34.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+|.++||++++++|+.+ ..+.|.
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 93 (107)
T 2i4a_A 52 KVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVI--DKKVGA 93 (107)
T ss_dssp SEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred cEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEE--EEecCC
Confidence 578899999999999999999999999999777654 234453
No 284
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.97 E-value=6.6e-06 Score=47.07 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 87 (108)
T 2trx_A 52 KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA 87 (108)
T ss_dssp TEEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEEE
Confidence 578899999999999999999999999999877653
No 285
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.94 E-value=5.5e-06 Score=58.05 Aligned_cols=45 Identities=24% Similarity=0.560 Sum_probs=38.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDYT 116 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~~ 116 (116)
.+.++.+||+.+.+++++|+|+++||+++|++|+.+ ...|.|..+
T Consensus 60 ~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~-~~~~~G~~~ 104 (382)
T 2r2j_A 60 QVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMM-KREYRGQRS 104 (382)
T ss_dssp CEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEE-EEECCSCCS
T ss_pred ceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEe-eeeecCcch
Confidence 478999999999999999999999999999988653 336888753
No 286
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.93 E-value=6.2e-06 Score=47.08 Aligned_cols=42 Identities=12% Similarity=0.207 Sum_probs=35.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
.+.+..++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 53 ~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~--~~~~g~ 94 (109)
T 3tco_A 53 KAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLV--DSLVGA 94 (109)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred CceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEE--Eeeecc
Confidence 578899999999999999999999999999877654 335554
No 287
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.92 E-value=6.9e-06 Score=50.68 Aligned_cols=43 Identities=26% Similarity=0.341 Sum_probs=35.9
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
+++.+..+|++.+.+++++|+|+++||+++|++|+.+ ..+.|.
T Consensus 95 ~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~--~~~~G~ 137 (155)
T 2ppt_A 95 GQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGREL--ARAAGA 137 (155)
T ss_dssp TTCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred CCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEE--EEecCC
Confidence 3688999999999999999999999999999877654 334554
No 288
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.91 E-value=8.2e-06 Score=50.83 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=33.8
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+.+.++++|.+++++++++|+|++.||+++|++|+.+
T Consensus 72 ~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v 108 (160)
T 2av4_A 72 NFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHM 108 (160)
T ss_dssp TTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEE
T ss_pred CCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEE
Confidence 3578999999999999999999999999999998775
No 289
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.91 E-value=1e-05 Score=48.57 Aligned_cols=44 Identities=9% Similarity=0.231 Sum_probs=36.2
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
..+.+..++++.+.+++++|+|+++||+++|++++++ ..+.|..
T Consensus 82 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~--~~~~G~~ 125 (141)
T 3hxs_A 82 GKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEP--QVNMGAL 125 (141)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCC--EEEESCC
T ss_pred CceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCE--EEEeCCC
Confidence 3588899999999999999999999999999666654 3566653
No 290
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.90 E-value=8.8e-06 Score=47.58 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=32.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 62 ~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 97 (116)
T 3qfa_C 62 NVIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKV 97 (116)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEE
T ss_pred CCEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEE
Confidence 478899999999999999999999999999888654
No 291
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.90 E-value=9.9e-05 Score=53.74 Aligned_cols=89 Identities=17% Similarity=0.095 Sum_probs=66.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce----eee--------
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT----IMI-------- 69 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~----v~f-------- 69 (116)
+|-+.++.+.|..|.++...++++++.-+ ++.+...+ . .. ...|++.+.+++ +.|
T Consensus 20 ~v~l~~~~~~~~~~~~~~~~~~~~~~~s~---~i~~~~~~--~-~~-------~~~p~~~~~~~~~~~~i~f~g~p~g~e 86 (521)
T 1hyu_A 20 PVELIATLDDSAKSAEIKELLAEIAELSD---KVTFKEDN--T-LP-------VRKPSFLITNPGSQQGPRFAGSPLGHE 86 (521)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTCT---TEEEEECT--T-SS-------SCSSEEEEECTTCCCSCEEESCCCGGG
T ss_pred CEEEEEEeCCCcchHHHHHHHHHHHHhCC---ceEEEEcC--C-cc-------cCCCEEEEecCCCcceEEEeccCcchh
Confidence 56677788889999999999999876543 56653321 1 10 467888887543 444
Q ss_pred ------------------------------------------------------------ceeeEEEEeccCccchhhhc
Q psy3452 70 ------------------------------------------------------------IRLALAAIDCTEHGPLCKEY 89 (116)
Q Consensus 70 ------------------------------------------------------------~~~~~~~v~~~~~~~~~~~~ 89 (116)
.++.+..+|.+.+.+++++|
T Consensus 87 ~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~ 166 (521)
T 1hyu_A 87 FTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITER 166 (521)
T ss_dssp HHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHT
T ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHHh
Confidence 46888899999999999999
Q ss_pred CCCCCCEEEEecCCcc
Q psy3452 90 DIKGYPTFQYFHYFNK 105 (116)
Q Consensus 90 ~v~~~Pt~~~~~~g~~ 105 (116)
+|+++||+++ +|+.
T Consensus 167 ~i~svPt~~i--~g~~ 180 (521)
T 1hyu_A 167 NVMGVPAVFV--NGKE 180 (521)
T ss_dssp TCCSSSEEEE--TTEE
T ss_pred CCCccCEEEE--CCEE
Confidence 9999999987 5544
No 292
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.90 E-value=1e-05 Score=47.16 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=34.7
Q ss_pred EEEEEc-----CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCCccccceE
Q psy3452 4 SILFYS-----PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~v~~~Pt~ 60 (116)
++.|+. +||++|++..+.+++. .+.+..+|+++++. +.+..+...+|++
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 344667 9999999999888753 46677888887653 3334566677764
No 293
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.90 E-value=1.4e-05 Score=50.69 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=34.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++.||.+|||+|..+.|.+.++.+.+++ .+.+..+...
T Consensus 24 ~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~~ 63 (195)
T 2znm_A 24 IEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHVV 63 (195)
T ss_dssp EEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEECC
T ss_pred cEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEeccc
Confidence 578999999999999999999999999876 5777776653
No 294
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.89 E-value=8.5e-06 Score=46.35 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=31.8
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 49 ~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 1nsw_A 49 KVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPV 84 (105)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECcCCHHHHHHcCCccccEEEEEeCCeEE
Confidence 478889999999999999999999999999777643
No 295
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.88 E-value=2.5e-05 Score=51.17 Aligned_cols=89 Identities=8% Similarity=0.101 Sum_probs=63.2
Q ss_pred CeEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc---ccccc----CCccccceEEEcCceeeecee
Q psy3452 1 MFYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG---PLCKE----YDIKGYPTFHHLALTIMIIRL 72 (116)
Q Consensus 1 ~~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~----~~v~~~Pt~~~~~~~v~f~~~ 72 (116)
++++++|| +.||+.|......+++..++++.. ++.++.++++... ..+++ .++..+|
T Consensus 57 K~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~-g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~-------------- 121 (219)
T 3tue_A 57 KWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL-NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMA-------------- 121 (219)
T ss_dssp SEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCS--------------
T ss_pred CEEEEEEecccCCCCCchhHhhHHHHHhhhccC-CcEEEEeeCCchhhHHHHhhhhHHhcCccccc--------------
Confidence 36889999 999999999999999999999876 5888888888643 22222 1221211
Q ss_pred eEEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 73 ALAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
..+-++.+.++++.||+- .+-+++++++.++|
T Consensus 122 --fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~I 159 (219)
T 3tue_A 122 --IPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGML 159 (219)
T ss_dssp --SCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBE
T ss_pred --cccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeE
Confidence 223447889999999983 23577888776655
No 296
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.88 E-value=8.7e-06 Score=47.50 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=35.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~--~~~~G~ 103 (121)
T 2i1u_A 62 DLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPV--KRIVGA 103 (121)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred CeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCEEE--EEecCC
Confidence 588899999999999999999999999999877653 334454
No 297
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.88 E-value=7.1e-06 Score=47.01 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=32.3
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 52 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 87 (107)
T 1gh2_A 52 QAVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRI 87 (107)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECccCHHHHHhcCCCcccEEEEEECCeEE
Confidence 578899999999999999999999999999888654
No 298
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.87 E-value=1.1e-05 Score=48.18 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|.++||++++++|+.+
T Consensus 72 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 107 (128)
T 2o8v_B 72 KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA 107 (128)
T ss_dssp TEEEEEEETTTCCTTSGGGTCCSSSEEEEEETTEEE
T ss_pred CeEEEEEECCCCHHHHHHcCCCccCEEEEEeCCEEE
Confidence 588999999999999999999999999999777653
No 299
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.87 E-value=2e-05 Score=50.77 Aligned_cols=44 Identities=23% Similarity=0.458 Sum_probs=37.4
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
+.+.++.++++.+.+++++|+|+++||++++++|+.+ ..|.|..
T Consensus 145 ~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~~ 188 (210)
T 3apq_A 145 GLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAA--VKYNGDR 188 (210)
T ss_dssp TTBEEEEEETTTCHHHHHHTTCCSSSEEEEECTTSCC--EECCSCC
T ss_pred CceEEEEEECCccHHHHHHcCCCcCCeEEEEECCCce--eEecCCC
Confidence 3588999999999999999999999999999887653 5677754
No 300
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.86 E-value=1e-05 Score=46.22 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 86 (107)
T 1dby_A 51 KLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKC 86 (107)
T ss_dssp TCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEE
T ss_pred ceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEE
Confidence 477889999999999999999999999999877653
No 301
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.86 E-value=9.2e-06 Score=47.01 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=32.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 50 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v 85 (110)
T 2l6c_A 50 QVAISSVDSEARPELMKELGFERVPTLVFIRDGKVA 85 (110)
T ss_dssp TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEE
T ss_pred CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEE
Confidence 577889999999999999999999999999887654
No 302
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.86 E-value=1e-05 Score=46.64 Aligned_cols=36 Identities=11% Similarity=0.285 Sum_probs=32.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 55 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 90 (112)
T 1t00_A 55 KIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVA 90 (112)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEEE
Confidence 578899999999999999999999999999887653
No 303
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.85 E-value=9.2e-06 Score=46.15 Aligned_cols=36 Identities=25% Similarity=0.468 Sum_probs=32.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 51 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 86 (105)
T 3m9j_A 51 NVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKV 86 (105)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEE
T ss_pred CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEE
Confidence 478899999999999999999999999999888664
No 304
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.85 E-value=1e-05 Score=47.38 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=34.6
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+|.++||++++++|+.+ ..+.|.
T Consensus 63 ~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 104 (119)
T 1w4v_A 63 KVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVV--DKFVGI 104 (119)
T ss_dssp SSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred CeEEEEEeCCCCHHHHHHcCCCcccEEEEEeCCcEE--EEEcCC
Confidence 578899999999999999999999999999777653 244454
No 305
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.85 E-value=5.4e-06 Score=50.08 Aligned_cols=42 Identities=17% Similarity=0.268 Sum_probs=35.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.++.++++.+.+++++|+|+++||++++++|+.+ ..|.|.
T Consensus 56 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 97 (140)
T 3hz4_A 56 SAVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPV--WEQVGQ 97 (140)
T ss_dssp TSEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEE--EEEESS
T ss_pred ceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEE--EEEcCC
Confidence 488899999999999999999999999999888664 345554
No 306
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.84 E-value=1.1e-05 Score=45.43 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=34.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+++++||++++++|+.+ ..+.|.
T Consensus 47 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--~~~~g~ 88 (104)
T 2e0q_A 47 QVGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPV--DEIIGA 88 (104)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEE--EEEESC
T ss_pred CceEEEEECCCCHHHHHhCCccccCEEEEEECCeEh--hhccCC
Confidence 377889999999999999999999999999877653 344453
No 307
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.84 E-value=1.2e-05 Score=45.78 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=34.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+|.++||++++++|+.+ ..+.|.
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--~~~~g~ 91 (109)
T 2yzu_A 50 KLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPV--EVLVGA 91 (109)
T ss_dssp TBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred ceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEe--eeEeCC
Confidence 578899999999999999999999999999777653 234443
No 308
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.84 E-value=2.1e-06 Score=52.93 Aligned_cols=24 Identities=29% Similarity=0.747 Sum_probs=21.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHH
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKA 25 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~ 25 (116)
.+++.|.-++|++|+++.+.++++
T Consensus 16 ~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 16 LKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp EEEEEEECTTCHHHHHHHHHHTTC
T ss_pred EEEEEEECCCChhHHHHHHHHhhc
Confidence 578999999999999999988754
No 309
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.83 E-value=1.2e-05 Score=46.42 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=32.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|.++||++++++|+.+
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 92 (115)
T 1thx_A 57 RLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQIL 92 (115)
T ss_dssp TCEEEEEESTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred cEEEEEEEcCCCHHHHHHcCCCceeEEEEEcCCEEE
Confidence 578899999999999999999999999999777653
No 310
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.82 E-value=1.3e-05 Score=46.22 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=32.3
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 89 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEISAVPYFIIIHKGTIL 89 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CEEEEEEecccCHHHHHHcCCCcccEEEEEECCEEE
Confidence 578899999999999999999999999999887654
No 311
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.81 E-value=1.4e-05 Score=45.44 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=32.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 87 (106)
T 1xwb_A 52 NVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKV 87 (106)
T ss_dssp TEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEE
Confidence 577889999999999999999999999999887654
No 312
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.81 E-value=1.4e-05 Score=48.16 Aligned_cols=42 Identities=21% Similarity=0.407 Sum_probs=35.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..+|++.+.+++++|+|+++||+++|++|+.+ ..+.|.
T Consensus 82 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 123 (140)
T 1v98_A 82 RLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPV--ATWVGA 123 (140)
T ss_dssp TEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred ceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEE--EEEeCC
Confidence 688999999999999999999999999999887653 334443
No 313
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.80 E-value=1.2e-05 Score=46.36 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=32.3
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 55 ~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 90 (109)
T 3f3q_A 55 QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEV 90 (109)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEE
Confidence 577889999999999999999999999999977654
No 314
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.79 E-value=1.2e-05 Score=51.15 Aligned_cols=38 Identities=11% Similarity=0.209 Sum_probs=31.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
+++|+|++.||++|+++.|.++++.+.+ + +.+..+...
T Consensus 24 ~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~---v~~~~~p~~ 61 (185)
T 3feu_A 24 APVTEVFALSCGHCRNMENFLPVISQEA-G---TDIGKMHIT 61 (185)
T ss_dssp CSEEEEECTTCHHHHHHGGGHHHHHHHH-T---SCCEEEECC
T ss_pred CEEEEEECCCChhHHHhhHHHHHHHHHh-C---CeEEEEecc
Confidence 5799999999999999999999999988 3 445555543
No 315
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.77 E-value=6.9e-05 Score=47.32 Aligned_cols=39 Identities=8% Similarity=0.158 Sum_probs=33.5
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~ 42 (116)
++++.|+.+|||+|..+.+.+.++.+.+++ .+.+..+..
T Consensus 27 v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 27 IEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred eEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 578999999999999999999999998876 577766665
No 316
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.76 E-value=1.4e-05 Score=45.27 Aligned_cols=36 Identities=19% Similarity=0.487 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 85 (105)
T 1fb6_A 50 KIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERK 85 (105)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEE
Confidence 477889999999999999999999999999877653
No 317
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.76 E-value=1.6e-05 Score=47.20 Aligned_cols=36 Identities=14% Similarity=0.208 Sum_probs=32.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 68 ~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~~~ 103 (125)
T 1r26_A 68 TVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKML 103 (125)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCEEEEEECCCCHHHHHHcCCCcccEEEEEeCCeEE
Confidence 578899999999999999999999999999887653
No 318
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.73 E-value=2.7e-05 Score=46.65 Aligned_cols=42 Identities=10% Similarity=0.233 Sum_probs=34.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEe-cCCcccCCcCCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYF-HYFNKQSPSPYHNDY 115 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~~~y~g~~ 115 (116)
++.+..++++.+.+++++|+|+++||++++ ++|+. ..+.|..
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~---~~~~G~~ 112 (136)
T 2l5l_A 70 QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP---EMAQGAM 112 (136)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC---EEEESCC
T ss_pred CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE---EEEeCCC
Confidence 578899999999999999999999999999 55543 2455543
No 319
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.72 E-value=0.00011 Score=45.79 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=31.8
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHh--ccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVL--KDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~--~~~~~~~~~~vd~ 42 (116)
++++.|+..|||+|..+.+.+.++.+++ ++ ++.+...+.
T Consensus 29 v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~--~v~~~~~~~ 69 (175)
T 1z6m_A 29 VKMIEFINVRCPYCRKWFEESEELLAQSVKSG--KVERIIKLF 69 (175)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT--SEEEEEEEC
T ss_pred eEEEEEECCCCcchHHHHHHHHHHHHHHhhCC--cEEEEEEeC
Confidence 5789999999999999999999998888 44 566655554
No 320
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.70 E-value=3.2e-05 Score=47.02 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=32.6
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||+++|++|+.+
T Consensus 55 ~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v 90 (142)
T 1qgv_A 55 FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHI 90 (142)
T ss_dssp TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEE
T ss_pred CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEE
Confidence 578899999999999999999999999999888654
No 321
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.70 E-value=2.1e-05 Score=45.80 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 63 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 98 (117)
T 2xc2_A 63 DAIFVKVDVDKLEETARKYNISAMPTFIAIKNGEKV 98 (117)
T ss_dssp SSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECCccHHHHHHcCCCccceEEEEeCCcEE
Confidence 467889999999999999999999999999887654
No 322
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.70 E-value=3.3e-05 Score=52.54 Aligned_cols=46 Identities=28% Similarity=0.628 Sum_probs=37.2
Q ss_pred eeeEEEEecc--CccchhhhcCCCCCCEEEEecCCcc---------------cCCcCCCCCCC
Q psy3452 71 RLALAAIDCT--EHGPLCKEYDIKGYPTFQYFHYFNK---------------QSPSPYHNDYT 116 (116)
Q Consensus 71 ~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~~---------------~~~~~y~g~~~ 116 (116)
.+.++.++++ .+.+++++|+|+++||+++|++|+. .....|.|..+
T Consensus 67 ~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~ 129 (298)
T 3ed3_A 67 VVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGART 129 (298)
T ss_dssp TSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCS
T ss_pred CcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcC
Confidence 4677888887 6789999999999999999998862 13578888764
No 323
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.67 E-value=2.8e-05 Score=45.48 Aligned_cols=36 Identities=17% Similarity=0.454 Sum_probs=32.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 65 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 100 (122)
T 2vlu_A 65 NAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVK 100 (122)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEE
Confidence 478899999999999999999999999999887653
No 324
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.66 E-value=1.9e-05 Score=45.36 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=32.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 56 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 91 (112)
T 1ep7_A 56 KVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKA 91 (112)
T ss_dssp TSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEE
T ss_pred CeEEEEEECCchHHHHHHcCCCcccEEEEEECCeEE
Confidence 578899999999999999999999999999887653
No 325
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.65 E-value=3.6e-05 Score=44.99 Aligned_cols=36 Identities=22% Similarity=0.618 Sum_probs=32.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.++.+|++.+.+++++|+|+++||++++++|+.+
T Consensus 53 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 53 KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGG
T ss_pred CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCcc
Confidence 578899999999999999999999999999877653
No 326
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.65 E-value=2.7e-05 Score=44.02 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 85 (104)
T 2vim_A 50 EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEV 85 (104)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEE
Confidence 567889999999999999999999999999887653
No 327
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.64 E-value=0.00014 Score=46.09 Aligned_cols=44 Identities=11% Similarity=0.011 Sum_probs=34.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeCCCcc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
++++|+++++||..|..+.... +++.+.++. ++.+...|.+..+
T Consensus 56 K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e 102 (178)
T 2ec4_A 56 KLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDS 102 (178)
T ss_dssp CEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHH
T ss_pred cEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCch
Confidence 4789999999999999987554 556666665 6888888887665
No 328
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.64 E-value=2.8e-05 Score=52.08 Aligned_cols=42 Identities=17% Similarity=0.425 Sum_probs=35.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..+|++.+.+++++|+|+++||+++|++|+.+ ..|.|.
T Consensus 58 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~--~~~~g~ 99 (287)
T 3qou_A 58 QFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPV--DGFQGP 99 (287)
T ss_dssp SSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEE--EEEESC
T ss_pred CeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEE--EEeeCC
Confidence 588899999999999999999999999999887654 234443
No 329
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.63 E-value=4.2e-05 Score=46.83 Aligned_cols=36 Identities=19% Similarity=0.476 Sum_probs=32.3
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||+++|++|+.+
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 98 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKI 98 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEE
Confidence 578899999999999999999999999999977553
No 330
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.63 E-value=0.00034 Score=44.40 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=56.7
Q ss_pred eEEEEEE-cCCCHHHH-hhhHHHHHHHHHh-ccCcce-EEEEEeCCCc---ccccccCCccccceEEEcCceeeeceeeE
Q psy3452 2 FYSILFY-SPGCGYCK-KAKPEYVKAAEVL-KDNHKV-ALAAIDCTEH---GPLCKEYDIKGYPTFHHLALTIMIIRLAL 74 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~-~~~~~~~~~~~~~-~~~~~~-~~~~vd~~~~---~~~~~~~~v~~~Pt~~~~~~~v~f~~~~~ 74 (116)
++++.|| +.||+.|. ...+.+++...++ ...+ + .++.+..+.. ...+++.++..+|
T Consensus 45 ~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g-~~~V~gvS~D~~~~~~~~~~~~~~~~f~---------------- 107 (182)
T 1xiy_A 45 KILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN-FDDIYCITNNDIYVLKSWFKSMDIKKIK---------------- 107 (182)
T ss_dssp EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC-CSEEEEEESSCHHHHHHHHHHTTCCSSE----------------
T ss_pred cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEeCCCHHHHHHHHHHcCCCCce----------------
Confidence 4556555 88999999 8899999998888 6654 5 3666666653 4555666654333
Q ss_pred EEEeccCccchhhhcCCC-----------CCCEEEEecCC
Q psy3452 75 AAIDCTEHGPLCKEYDIK-----------GYPTFQYFHYF 103 (116)
Q Consensus 75 ~~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g 103 (116)
+-.+.+.++++.||+. ...+.+++++|
T Consensus 108 --lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG 145 (182)
T 1xiy_A 108 --YISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENN 145 (182)
T ss_dssp --EEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEETT
T ss_pred --EEEeCchHHHHHhCCceeccccCCCCceEEEEEEEcCC
Confidence 2235778888888873 35677788754
No 331
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.63 E-value=3.3e-05 Score=44.60 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=32.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|.++||++++++|+.+
T Consensus 57 ~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 92 (112)
T 1syr_A 57 KMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSV 92 (112)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCEEEEEECCCCHHHHHHcCCCcccEEEEEECCcEE
Confidence 477889999999999999999999999999887653
No 332
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.62 E-value=3.4e-05 Score=44.95 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=31.8
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|++.+.+++++|+|+++||++++++|+.+
T Consensus 61 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 96 (114)
T 2oe3_A 61 DVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLI 96 (114)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred CCEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeEE
Confidence 367889999999999999999999999999887653
No 333
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.61 E-value=5.6e-05 Score=44.66 Aligned_cols=36 Identities=17% Similarity=0.347 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 69 ~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 104 (124)
T 1xfl_A 69 NVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKIL 104 (124)
T ss_dssp SEEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CcEEEEEECccCHHHHHHcCCCccCEEEEEECCEEE
Confidence 577889999999999999999999999999887653
No 334
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.59 E-value=3.9e-05 Score=45.17 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=31.5
Q ss_pred ceeeEEEEe--ccCccchhhhcCCCCCCEEEEec-CCcc
Q psy3452 70 IRLALAAID--CTEHGPLCKEYDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 70 ~~~~~~~v~--~~~~~~~~~~~~v~~~Pt~~~~~-~g~~ 105 (116)
.++.+..++ ++.+.+++++|+|.++||+++++ +|+.
T Consensus 57 ~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 57 GKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNK 95 (126)
T ss_dssp SSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCE
T ss_pred CCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCE
Confidence 467889999 88999999999999999999998 5544
No 335
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.58 E-value=4.7e-05 Score=49.45 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=35.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
.+.+..++++.+.+++++|+|.++||++++++|+.+ ..+.|.
T Consensus 62 ~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~--~~~~G~ 103 (222)
T 3dxb_A 62 KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGA 103 (222)
T ss_dssp TCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEEE--EEEESC
T ss_pred CcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeEE--EEeccc
Confidence 478899999999999999999999999999888654 344444
No 336
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.57 E-value=2.9e-05 Score=45.59 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=31.7
Q ss_pred eeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+.+..++++.+.+++++|+|.++||++++++|+.+
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~ 101 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKI 101 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEE
T ss_pred EEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEE
Confidence 78899999999999999999999999999887653
No 337
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.57 E-value=0.00011 Score=39.93 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=28.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
++.+..+|.+.+.+++++|+|+++||+++ +|+
T Consensus 34 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~ 65 (85)
T 1fo5_A 34 AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGD 65 (85)
T ss_dssp SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTE
T ss_pred ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCE
Confidence 57888999999999999999999999999 554
No 338
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=97.57 E-value=6.9e-05 Score=42.23 Aligned_cols=53 Identities=8% Similarity=0.011 Sum_probs=35.3
Q ss_pred CeEEEEEEcCCCHHH------HhhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccCC--ccccceEE
Q psy3452 1 MFYSILFYSPGCGYC------KKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEYD--IKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C------~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~~--v~~~Pt~~ 61 (116)
|.-++.|+++||+.| ++....+++ . .+.+..+|++.+++ +.+..+ ...+|.+.
T Consensus 1 M~~v~ly~~~~C~~c~~~~~~~~ak~~L~~----~----~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if 65 (93)
T 1t1v_A 1 MSGLRVYSTSVTGSREIKSQQSEVTRILDG----K----RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV 65 (93)
T ss_dssp CCCEEEEECSSCSCHHHHHHHHHHHHHHHH----T----TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE
T ss_pred CCCEEEEEcCCCCCchhhHHHHHHHHHHHH----C----CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE
Confidence 445677999999999 666655553 2 46777788876643 334556 55777664
No 339
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.57 E-value=5.9e-05 Score=48.14 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=31.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHH---HHHHHHhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY---VKAAEVLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~vd~ 42 (116)
+++|.|+..|||+|.++.|.+ .++.+.+++...+.+..+..
T Consensus 23 ~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~ 66 (191)
T 3l9s_A 23 PQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEF 66 (191)
T ss_dssp SCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSS
T ss_pred CeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEeccc
Confidence 578999999999999999986 68999998733444444443
No 340
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=97.56 E-value=0.00011 Score=40.76 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=23.9
Q ss_pred EEEEEcC----CCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 4 SILFYSP----GCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 4 ~v~F~a~----wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++.|+.+ ||+.|++....+++. .+.+..+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~--------gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK--------KQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT--------TCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc--------CCCEEEEEee
Confidence 4568899 999999998887752 3556666666
No 341
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.55 E-value=0.00017 Score=43.12 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=30.5
Q ss_pred ceeeEEEEeccCccchhhhcCCCC--CCEEEEecC
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKG--YPTFQYFHY 102 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~--~Pt~~~~~~ 102 (116)
+++.++.+|.+++.+++++|+|++ .||++++++
T Consensus 53 gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~ 87 (133)
T 2djk_A 53 GVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEV 87 (133)
T ss_dssp TTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECT
T ss_pred CeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEec
Confidence 468899999999999999999999 999999986
No 342
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.68 E-value=1.2e-05 Score=45.47 Aligned_cols=42 Identities=14% Similarity=0.277 Sum_probs=34.2
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHND 114 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~ 114 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+ ..+.|.
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~--~~~~g~ 92 (106)
T 2yj7_A 51 KVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVV--DRLVGA 92 (106)
Confidence 577788899999999999999999999999777653 345553
No 343
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.53 E-value=7e-05 Score=43.27 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=32.0
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 59 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (118)
T 2vm1_A 59 GAIFLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKV 94 (118)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred CcEEEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEE
Confidence 467889999999999999999999999999887654
No 344
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.52 E-value=2.7e-05 Score=46.67 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=20.5
Q ss_pred CCcccccccCCccccceEEEcCce
Q psy3452 43 TEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 43 ~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
+++++++++|++.++||++++++|
T Consensus 79 d~~~~l~~~~~v~~~Pt~~~~~~G 102 (135)
T 3emx_A 79 SAARLEMNKAGVEGTPTLVFYKEG 102 (135)
T ss_dssp HHHHHHHHHHTCCSSSEEEEEETT
T ss_pred hhhHHHHHHcCCceeCeEEEEcCC
Confidence 456678899999999999999974
No 345
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.51 E-value=0.0001 Score=45.06 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=32.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.+.+..+|++.+.+++++|+|.++||++++++|+.+
T Consensus 55 ~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 55 MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp TEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEE
Confidence 478899999999999999999999999999988764
No 346
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.49 E-value=0.00018 Score=47.13 Aligned_cols=49 Identities=20% Similarity=0.342 Sum_probs=31.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccc---ccccCCccccceE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGP---LCKEYDIKGYPTF 60 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~v~~~Pt~ 60 (116)
++.|+.+||+.|++....+++. .+.+..+|++.+.. +.+.++...+|++
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~~--------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~ 223 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHDK--------GLSFEEIILGHDATIVSVRAVSGRTTVPQV 223 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEETTTTCCHHHHHHHTCCSSSCEE
T ss_pred EEEEECCCChHHHHHHHHHHHc--------CCceEEEECCCchHHHHHHHHhCCCCcCEE
Confidence 5678999999999998888753 34455566654432 3444555555554
No 347
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.46 E-value=0.00011 Score=42.13 Aligned_cols=37 Identities=27% Similarity=0.481 Sum_probs=31.6
Q ss_pred ceeeEEEEecc-CccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCT-EHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.++.+..+|++ .+.+++++|+|+++||++++++|+.+
T Consensus 54 ~~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 91 (111)
T 2pu9_C 54 LDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVV 91 (111)
T ss_dssp TTSEEEEEECSSTTHHHHHHHCCSBSSEEEEESSSSEE
T ss_pred CCeEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEE
Confidence 35788899988 78899999999999999988888653
No 348
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.45 E-value=7.8e-05 Score=43.62 Aligned_cols=32 Identities=13% Similarity=0.425 Sum_probs=29.8
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecC
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHY 102 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 102 (116)
++.+..+|++.+.+++++|+|+++||++++++
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 57889999999999999999999999999987
No 349
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.45 E-value=7.2e-05 Score=42.88 Aligned_cols=36 Identities=17% Similarity=0.389 Sum_probs=31.9
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 92 (113)
T 1ti3_A 57 NVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLV 92 (113)
T ss_dssp SEEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEE
T ss_pred CcEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEE
Confidence 577889999999999999999999999999887653
No 350
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.45 E-value=0.00014 Score=39.52 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=28.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
++.+..+|.+.+.+++++|+|+++||+++ +|+
T Consensus 33 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~ 64 (85)
T 1nho_A 33 KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGV 64 (85)
T ss_dssp SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTT
T ss_pred CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCE
Confidence 57888999999999999999999999999 554
No 351
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.43 E-value=7.7e-05 Score=44.60 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=32.5
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 76 ~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 112 (139)
T 3d22_A 76 PSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQV 112 (139)
T ss_dssp TTSEEEEEETTTSHHHHHHTTCCEESEEEEEETTEEE
T ss_pred CCCEEEEEeCcccHHHHHHcCCCcccEEEEEcCCeEE
Confidence 3578899999999999999999999999999877653
No 352
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.41 E-value=7e-05 Score=43.87 Aligned_cols=37 Identities=27% Similarity=0.481 Sum_probs=31.6
Q ss_pred ceeeEEEEecc-CccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCT-EHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.++.+..+|++ .+.+++++|+|+++||++++++|+.+
T Consensus 67 ~~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 104 (124)
T 1faa_A 67 LDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVV 104 (124)
T ss_dssp TTSEEEEEECSSTTHHHHHHHCCSSSSEEEEEETTEEE
T ss_pred CCCEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEE
Confidence 35788899987 68899999999999999999888653
No 353
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.40 E-value=5.3e-05 Score=44.60 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=31.7
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++++.+.+++++|+|+++||++++++|+.+
T Consensus 67 ~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 102 (130)
T 1wmj_A 67 GAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEA 102 (130)
T ss_dssp TBCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCC
T ss_pred CCEEEEEeccchHHHHHHcCCCccceEEEEeCCeEE
Confidence 467788999999999999999999999999887654
No 354
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.39 E-value=8.2e-05 Score=44.50 Aligned_cols=34 Identities=29% Similarity=0.507 Sum_probs=30.4
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEec--CCc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFH--YFN 104 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~--~g~ 104 (116)
++.+..+|++.+.+++++|+|+++||+++|+ +|+
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 70 YVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNE 105 (133)
T ss_dssp ECEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTE
T ss_pred CEEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCC
Confidence 4778899999999999999999999999996 665
No 355
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.39 E-value=0.0002 Score=46.93 Aligned_cols=35 Identities=37% Similarity=0.946 Sum_probs=31.4
Q ss_pred eeeEEEEec--cCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 71 RLALAAIDC--TEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 71 ~~~~~~v~~--~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
.+.++.+|+ +.+.+++++|+|+++||+++|++|++
T Consensus 65 ~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 65 ALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp TEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCC
T ss_pred cEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCc
Confidence 588999999 67889999999999999999998755
No 356
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.33 E-value=0.0027 Score=41.84 Aligned_cols=54 Identities=26% Similarity=0.365 Sum_probs=40.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
+++|-|+++||. ...+.+.++++.+.+ .+.|..+ .+++++++++++. |++++|+
T Consensus 26 v~vvgff~~~~~---~~~~~f~~~A~~lr~--~~~F~~~---~~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 26 ASIVGFFDDSFS---EAHSEFLKAASNLRD--NYRFAHT---NVESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEEEEESCTTS---HHHHHHHHHHHHTTT--TSCEEEE---CCHHHHHHHCSSS-EEEEEEC
T ss_pred eEEEEEECCCCC---hHHHHHHHHHHhccc--CcEEEEE---ChHHHHHHhCCCC-CcEEEEc
Confidence 467888899854 467789999999976 5666665 3456778888886 8888665
No 357
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.32 E-value=0.00025 Score=41.96 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=30.4
Q ss_pred eeeEEEEec---cCccchhhhcCC---CCCCEEEEe-cCCcc
Q psy3452 71 RLALAAIDC---TEHGPLCKEYDI---KGYPTFQYF-HYFNK 105 (116)
Q Consensus 71 ~~~~~~v~~---~~~~~~~~~~~v---~~~Pt~~~~-~~g~~ 105 (116)
++.+..++. +.+.+++++|+| .++||++++ ++|+.
T Consensus 63 ~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 63 HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 577888998 889999999999 999999999 55544
No 358
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.31 E-value=0.00042 Score=41.33 Aligned_cols=32 Identities=13% Similarity=0.010 Sum_probs=24.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEE
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAA 39 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~ 39 (116)
+++|-|+++||++| .+.+.++++.+ + .+.|+.
T Consensus 41 v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~ 72 (124)
T 2l4c_A 41 VAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGI 72 (124)
T ss_dssp EEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEE
T ss_pred CEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEE
Confidence 57889999999998 56889999988 4 355544
No 359
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.00011 Score=44.01 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=33.1
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-----cccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-----PLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-----~~~~~~~v~~~Pt~~ 61 (116)
++.|..+||+.|.+....+++.. .+.- .+..+.+|.+.+. .+.+..+...+|++.
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~-~~~v--~~~~idid~~~d~~~~~~~l~~~~G~~tVP~If 75 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEY-QFIP--NYYIIELDKHGHGEELQEYIKLVTGRGTVPNLL 75 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHE-EEES--CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhc-ccCC--CcEEEEecCCCCHHHHHHHHHHHcCCCCcceEE
Confidence 67799999999999998888631 0111 2344444443321 122334667788775
No 360
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.30 E-value=0.00013 Score=44.18 Aligned_cols=44 Identities=18% Similarity=0.374 Sum_probs=29.3
Q ss_pred CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEE
Q psy3452 10 PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFH 61 (116)
Q Consensus 10 ~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~ 61 (116)
+||+.|++....+++. .+.+..+|++.++++. +..+...+|.+.
T Consensus 48 ~~Cp~C~~ak~~L~~~--------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~Vf 95 (135)
T 2wci_A 48 PSCGFSAQAVQALAAC--------GERFAYVDILQNPDIRAELPKYANWPTFPQLW 95 (135)
T ss_dssp BSSHHHHHHHHHHHTT--------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred CCCccHHHHHHHHHHc--------CCceEEEECCCCHHHHHHHHHHHCCCCcCEEE
Confidence 8999999998888653 3566677776654332 234556677653
No 361
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.28 E-value=0.00015 Score=41.28 Aligned_cols=40 Identities=33% Similarity=0.659 Sum_probs=33.3
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
++.+|++.+.+++++|+|+++||++++++|+.+ ..+.|..
T Consensus 59 ~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~--~~~~g~~ 98 (111)
T 3uvt_A 59 IAEVDCTAERNICSKYSVRGYPTLLLFRGGKKV--SEHSGGR 98 (111)
T ss_dssp EEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE--EEECSCC
T ss_pred EEEEeccccHhHHHhcCCCcccEEEEEeCCcEE--EeccCCc
Confidence 478899999999999999999999999888764 4566653
No 362
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.28 E-value=0.00021 Score=41.72 Aligned_cols=50 Identities=20% Similarity=0.396 Sum_probs=33.3
Q ss_pred EEEEEc-----CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccc----ccCCccccceEE
Q psy3452 4 SILFYS-----PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLC----KEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a-----~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~----~~~~v~~~Pt~~ 61 (116)
++.|.. +||+.|++....+++. .+.+..+|++.+++.. +..+...+|.+.
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~--------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~if 76 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH--------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLY 76 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc--------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEE
Confidence 455777 9999999999888752 3556667776654332 233556677664
No 363
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.24 E-value=0.00046 Score=40.22 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=33.8
Q ss_pred EEEEEcCCCHHHH------hhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccC--------CccccceEE
Q psy3452 4 SILFYSPGCGYCK------KAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEY--------DIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~------~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~--------~v~~~Pt~~ 61 (116)
++.|+.+||+.|. +....+++ . .+.+..+|++.+++ +.+.+ +...+|.+.
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~----~----gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf 77 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA----N----KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF 77 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T----TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH----c----CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE
Confidence 4568899999999 55555543 2 47788888887653 33343 666788775
No 364
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.22 E-value=0.0003 Score=41.32 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=31.3
Q ss_pred eeeEEEEec-------cCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDC-------TEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~-------~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++. +.+.+++++|+|+++||+++|++++++
T Consensus 63 ~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~~~~ 105 (123)
T 1wou_A 63 GCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKL 105 (123)
T ss_dssp TEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSSCEE
T ss_pred CcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCCceE
Confidence 577888998 788899999999999999999886554
No 365
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.21 E-value=0.00018 Score=42.46 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=28.7
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.++.+.++|.+.. +++|+|++.||+++|++|+.+
T Consensus 53 ~~v~f~kvd~d~~---~~~~~v~~~PT~~~fk~G~~v 86 (118)
T 3evi_A 53 PETKFVKAIVNSC---IQHYHDNCLPTIFVYKNGQIE 86 (118)
T ss_dssp TTSEEEEEEGGGT---STTCCGGGCSEEEEEETTEEE
T ss_pred CCCEEEEEEhHHh---HHHCCCCCCCEEEEEECCEEE
Confidence 4578899998864 589999999999999999654
No 366
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.00024 Score=41.81 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=28.4
Q ss_pred eeeEEEEecc--CccchhhhcCCCCCCEEEEec-CCcc
Q psy3452 71 RLALAAIDCT--EHGPLCKEYDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 71 ~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~-~g~~ 105 (116)
.+.+..++++ .+.+++++|+|.++||+++++ +|+.
T Consensus 62 ~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 62 HFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEV 99 (130)
T ss_dssp HSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCE
T ss_pred CeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcE
Confidence 4567788877 577899999999999999994 5544
No 367
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=97.12 E-value=0.0014 Score=44.06 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=39.7
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC------------------cccccccCCcccc--ceEE
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE------------------HGPLCKEYDIKGY--PTFH 61 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~------------------~~~~~~~~~v~~~--Pt~~ 61 (116)
..+..|++++|++|.+....+.++...+ .+.....+.+. .+.++++++.+.+ |.++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~----~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~ 119 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG----DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAI 119 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT----SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEE
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC----CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEE
Confidence 4567799999999999999999987764 34322233221 1235667888888 9876
Q ss_pred E
Q psy3452 62 H 62 (116)
Q Consensus 62 ~ 62 (116)
+
T Consensus 120 I 120 (270)
T 2axo_A 120 L 120 (270)
T ss_dssp E
T ss_pred E
Confidence 5
No 368
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.12 E-value=0.00099 Score=41.88 Aligned_cols=40 Identities=25% Similarity=0.325 Sum_probs=32.1
Q ss_pred eEEEEEEcCCCHHHHhhhHHH-HHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY-VKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~-~~~~~~~~~~~~~~~~~vd~~ 43 (116)
+++|+||..+||+|..+.+.+ .++.+.+++ .+.+......
T Consensus 19 ~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~--~v~~~~~~l~ 59 (195)
T 3c7m_A 19 KTLIKVFSYACPFCYKYDKAVTGPVSEKVKD--IVAFTPFHLE 59 (195)
T ss_dssp TEEEEEECTTCHHHHHHHHHTHHHHHHHTTT--TCEEEEEECT
T ss_pred cEEEEEEeCcCcchhhCcHHHHHHHHHhCCC--ceEEEEEecC
Confidence 467889999999999999999 999988876 4555555543
No 369
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.08 E-value=0.00029 Score=41.34 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=32.7
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
++.+|++.+.+++++|+|+++||++++++|+ + ..|.|..
T Consensus 58 ~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~--~~~~G~~ 96 (126)
T 1x5e_A 58 IAKVDVTEQPGLSGRFIINALPTIYHCKDGE-F--RRYQGPR 96 (126)
T ss_dssp EEEEETTTCHHHHHHTTCCSSSEEEEEETTE-E--EECCSCC
T ss_pred EEEEECcCCHHHHHHcCCcccCEEEEEeCCe-E--EEeecCC
Confidence 4678999999999999999999999997775 3 5677754
No 370
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.05 E-value=0.00023 Score=40.93 Aligned_cols=58 Identities=21% Similarity=0.340 Sum_probs=42.8
Q ss_pred EEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 7 FYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 7 F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
=|-+.|..=......+.+..+.....- .++.+|++++..+++++++.++||++++++|
T Consensus 34 ~~C~~C~~~~~~~~~~~~~~~~~~~~v--~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 91 (120)
T 1mek_A 34 PWCGHCKALAPEYAKAAGKLKAEGSEI--RLAKVDATEESDLAQQYGVRGYPTIKFFRNG 91 (120)
T ss_dssp SSCSTTSTTHHHHHHHHHTTTTTCCCC--BCEEEETTTCCSSHHHHTCCSSSEEEEEESS
T ss_pred CCCHHHHHhhHHHHHHHHHHhccCCcE--EEEEEcCCCCHHHHHHCCCCcccEEEEEeCC
Confidence 467888777766666655544332222 3578899999999999999999999998764
No 371
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.04 E-value=0.00038 Score=40.84 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=31.5
Q ss_pred ceeeEEEEeccCccc----hhhhcCCC-CCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGP----LCKEYDIK-GYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~----~~~~~~v~-~~Pt~~~~~~g~~~ 106 (116)
.++.+..+|.+++.+ ++.+++|+ ..||+++|++|+.+
T Consensus 53 ~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v 94 (112)
T 3iv4_A 53 RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMV 94 (112)
T ss_dssp HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEE
T ss_pred CCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEE
Confidence 357788999888865 89999999 49999999999765
No 372
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.03 E-value=0.00048 Score=40.69 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=28.4
Q ss_pred eeEEEEeccCc--cchhhhcCCCCCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEH--GPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+.+.++|.+.+ .+++.+++|.+.||+++|++|+.+
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev 89 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVES 89 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEE
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEE
Confidence 45667776654 578999999999999999988765
No 373
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.99 E-value=0.0008 Score=39.74 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=28.5
Q ss_pred CCCHHHHhhhHHHHHHHHHhccCcceE-EEEEeCCCccccc----ccCCccccceEE
Q psy3452 10 PGCGYCKKAKPEYVKAAEVLKDNHKVA-LAAIDCTEHGPLC----KEYDIKGYPTFH 61 (116)
Q Consensus 10 ~wC~~C~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~----~~~~v~~~Pt~~ 61 (116)
|||++|.+....+++. .+. +..+|+++++++. +..+...+|.+.
T Consensus 33 p~Cp~C~~ak~lL~~~--------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vf 81 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH--------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp BSSHHHHHHHHHHHHT--------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEE
T ss_pred CccHHHHHHHHHHHHc--------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEE
Confidence 4999999998888753 353 6666776654332 223556677664
No 374
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=96.98 E-value=0.00089 Score=42.12 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=56.5
Q ss_pred eEEEEEE-cCCCHHHHhhhHHHHHHHHHhccCcceE-EEEEeCCCc---ccccccCCcc-ccceEEEcCceeeeceeeEE
Q psy3452 2 FYSILFY-SPGCGYCKKAKPEYVKAAEVLKDNHKVA-LAAIDCTEH---GPLCKEYDIK-GYPTFHHLALTIMIIRLALA 75 (116)
Q Consensus 2 ~v~v~F~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~---~~~~~~~~v~-~~Pt~~~~~~~v~f~~~~~~ 75 (116)
++++.|| +.||+.|....+.+.+...+++..+ +. ++.+.++.. .+.+++.++. .+|
T Consensus 44 ~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g-v~~VigIS~D~~~~~~~w~~~~~~~~~f~----------------- 105 (171)
T 2xhf_A 44 KGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG-YHTIACIAVNDPFVMAAWGKTVDPEHKIR----------------- 105 (171)
T ss_dssp EEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT-CCEEEEEESSCHHHHHHHHHHHCTTCCSE-----------------
T ss_pred eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC-CCEEEEEeCCCHHHHHHHHHhcCCCCCeE-----------------
Confidence 4666666 7899999999999999988887654 53 667776654 3445555542 222
Q ss_pred EEeccCccchhhhcCCC-----------CCCEEEEecCC
Q psy3452 76 AIDCTEHGPLCKEYDIK-----------GYPTFQYFHYF 103 (116)
Q Consensus 76 ~v~~~~~~~~~~~~~v~-----------~~Pt~~~~~~g 103 (116)
+-.+.+.++++.||+. ...+.+++++|
T Consensus 106 -lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvIddG 143 (171)
T 2xhf_A 106 -MLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLIDDN 143 (171)
T ss_dssp -EEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEETT
T ss_pred -EEEeCCchHHHHhCCceeccccCCCcceEEEEEEEeCC
Confidence 2336778899988874 23566777744
No 375
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.97 E-value=0.00036 Score=41.55 Aligned_cols=39 Identities=28% Similarity=0.508 Sum_probs=32.7
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCCCC
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHNDY 115 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g~~ 115 (116)
++.+|++.+.+++++|+|+++||+++|++|+ + ..|.|..
T Consensus 72 ~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~--~~~~g~~ 110 (140)
T 2dj1_A 72 VAKIDATSASMLASKFDVSGYPTIKILKKGQ-A--VDYDGSR 110 (140)
T ss_dssp EEEECTTTCHHHHHHTTCCSSSEEEEEETTE-E--EECCSCC
T ss_pred EEEEeCcccHHHHHHCCCCccCeEEEEECCc-E--EEcCCCC
Confidence 4678999999999999999999999998776 3 5677754
No 376
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.96 E-value=0.00067 Score=39.34 Aligned_cols=43 Identities=16% Similarity=0.339 Sum_probs=27.1
Q ss_pred CCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccc----cccCCccccceE
Q psy3452 10 PGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPL----CKEYDIKGYPTF 60 (116)
Q Consensus 10 ~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~----~~~~~v~~~Pt~ 60 (116)
|||+.|++....+++. .+.+..+|+++++.. .+..+...+|.+
T Consensus 31 p~Cp~C~~ak~~L~~~--------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~i 77 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL--------NVPFEDVNILENEMLRQGLKEYSNWPTFPQL 77 (109)
T ss_dssp BSSHHHHHHHHHHHHT--------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEE
T ss_pred CCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeE
Confidence 4999999999888763 355666666655432 222345556644
No 377
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.95 E-value=0.00021 Score=46.51 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=31.7
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
..+.++.++++ +..++++|+|.++||+++|++|+.+
T Consensus 150 ~~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v 185 (217)
T 2trc_P 150 PMVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELI 185 (217)
T ss_dssp TTSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEE
T ss_pred CCeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEE
Confidence 56889999988 7889999999999999999988653
No 378
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.90 E-value=0.0013 Score=48.12 Aligned_cols=35 Identities=40% Similarity=1.015 Sum_probs=30.5
Q ss_pred eeeEEEEecc--CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 71 RLALAAIDCT--EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 71 ~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
.+.++.+|++ .+.+++++|+|+++||+++|++|++
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~ 101 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTK 101 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCC
T ss_pred cEEEEEEECCccccHHHHHHcCCcccCEEEEEcCccc
Confidence 5889999995 5889999999999999999987543
No 379
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.87 E-value=0.00085 Score=39.52 Aligned_cols=39 Identities=23% Similarity=0.490 Sum_probs=33.6
Q ss_pred EEEeccCccchhhhcCCCCCCEEEEecCCcccCCcCCCC
Q psy3452 75 AAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQSPSPYHN 113 (116)
Q Consensus 75 ~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~y~g 113 (116)
+.+|++.+..++++|+|+++||++++++|+++....|.|
T Consensus 63 ~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g 101 (133)
T 2dj3_A 63 AKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEG 101 (133)
T ss_dssp EEECTTTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCS
T ss_pred EEecCCcCHHHHhhcCCCcCCEEEEEeCCCcccceEecC
Confidence 578889999999999999999999999888766666773
No 380
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.87 E-value=0.002 Score=37.16 Aligned_cols=14 Identities=29% Similarity=0.660 Sum_probs=12.5
Q ss_pred CccccceEEEcCce
Q psy3452 53 DIKGYPTFHHLALT 66 (116)
Q Consensus 53 ~v~~~Pt~~~~~~~ 66 (116)
+++++||+++++++
T Consensus 78 ~v~~~Pt~~~~~~~ 91 (121)
T 2djj_A 78 EIQGFPTIKLYPAG 91 (121)
T ss_dssp CCSSSSEEEEECSS
T ss_pred ccCcCCeEEEEeCc
Confidence 78999999999875
No 381
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.87 E-value=0.0013 Score=39.23 Aligned_cols=34 Identities=9% Similarity=-0.000 Sum_probs=27.7
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
.++.+..+|++... ++|+|+++||+++|++|+.+
T Consensus 60 ~~v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v 93 (135)
T 2dbc_A 60 PETKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIE 93 (135)
T ss_dssp SSEEEEEECCSSSC---SSCCSSCCSEEEEESSSSCS
T ss_pred CCcEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEE
Confidence 35778888887654 78999999999999988654
No 382
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.0021 Score=37.97 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=28.7
Q ss_pred CCCHHHHhhhHHHHHHHHHhccCcceE---EEEEeCCCcccc----cccCCccccceEE
Q psy3452 10 PGCGYCKKAKPEYVKAAEVLKDNHKVA---LAAIDCTEHGPL----CKEYDIKGYPTFH 61 (116)
Q Consensus 10 ~wC~~C~~~~~~~~~~~~~~~~~~~~~---~~~vd~~~~~~~----~~~~~v~~~Pt~~ 61 (116)
|||++|++....+++. .+. +..+|++.++++ .+..+...+|.+.
T Consensus 29 p~Cp~C~~ak~lL~~~--------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vf 79 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ--------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLY 79 (121)
T ss_dssp BCTTHHHHHHHHHHHH--------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEE
T ss_pred CCCccHHHHHHHHHHc--------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEE
Confidence 4999999999888874 233 556666655433 2334566677664
No 383
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=96.74 E-value=0.00076 Score=44.85 Aligned_cols=24 Identities=13% Similarity=0.463 Sum_probs=21.6
Q ss_pred eCCC-----cccccccCCcc--ccceEEEcC
Q psy3452 41 DCTE-----HGPLCKEYDIK--GYPTFHHLA 64 (116)
Q Consensus 41 d~~~-----~~~~~~~~~v~--~~Pt~~~~~ 64 (116)
||++ +++++++|+|+ ++||+++|.
T Consensus 73 D~d~~g~~~n~~la~~~~V~~~~~PTl~~F~ 103 (248)
T 2c0g_A 73 GVKDYGELENKALGDRYKVDDKNFPSIFLFK 103 (248)
T ss_dssp EECSSTTCTTHHHHHHTTCCTTSCCEEEEES
T ss_pred ECCcccccccHHHHHHhCCCcCCCCeEEEEe
Confidence 5566 78999999999 999999998
No 384
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.74 E-value=0.00067 Score=40.43 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=29.3
Q ss_pred EEEEeccCccchhhhcCCC------CCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCKEYDIK------GYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~------~~Pt~~~~~~g~~~ 106 (116)
++.+|++.+.+++++|+|+ ++||+++|++|+.+
T Consensus 62 ~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~ 100 (137)
T 2dj0_A 62 FGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEA 100 (137)
T ss_dssp EEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEE
T ss_pred EEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEE
Confidence 4778999999999999999 99999999888754
No 385
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.73 E-value=0.0011 Score=38.11 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=18.7
Q ss_pred CccchhhhcCCCCCCEEEEecCCc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
++.+++++|+|+++||+++ +|+
T Consensus 54 ~~~~l~~~~~V~~~PT~~i--~G~ 75 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII--NGR 75 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE--TTE
T ss_pred hhHHHHHHcCCeEeCEEEE--CCE
Confidence 5788999999999999887 553
No 386
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.67 E-value=0.0023 Score=39.03 Aligned_cols=14 Identities=21% Similarity=0.693 Sum_probs=5.8
Q ss_pred cccCCccccceEEE
Q psy3452 49 CKEYDIKGYPTFHH 62 (116)
Q Consensus 49 ~~~~~v~~~Pt~~~ 62 (116)
+++|++.++||+++
T Consensus 109 ~~~~~v~~~Pt~~~ 122 (154)
T 2ju5_A 109 KAQYKVTGFPELVF 122 (154)
T ss_dssp HHHTTCCSSSEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 33444444444433
No 387
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.60 E-value=0.00082 Score=44.62 Aligned_cols=36 Identities=8% Similarity=0.055 Sum_probs=30.8
Q ss_pred ceeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 70 IRLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 70 ~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
..+.++.++++. ..++++|+|.++||+++|++|+.+
T Consensus 163 ~~v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v 198 (245)
T 1a0r_P 163 PMVKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELL 198 (245)
T ss_dssp TTSEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEE
T ss_pred CCCEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEE
Confidence 568899999876 678999999999999999988653
No 388
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.59 E-value=0.00035 Score=41.12 Aligned_cols=31 Identities=29% Similarity=0.640 Sum_probs=25.5
Q ss_pred eeeEEEEec--cCccchhhhcCCCCCCEEEEec
Q psy3452 71 RLALAAIDC--TEHGPLCKEYDIKGYPTFQYFH 101 (116)
Q Consensus 71 ~~~~~~v~~--~~~~~~~~~~~v~~~Pt~~~~~ 101 (116)
++.+..+++ +.+.+++++|+|.++||+++++
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d 86 (130)
T 2lst_A 54 RFVVASVSVDTPEGQELARRYRVPGTPTFVFLV 86 (130)
Confidence 356667776 4668899999999999999994
No 389
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.57 E-value=0.0068 Score=38.78 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=32.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHH-HHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY-VKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~-~~~~~~~~~~~~~~~~~vd~~ 43 (116)
++++.|....||+|+++.+.+ ..+.+.|.+.+++.+...+..
T Consensus 31 vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 31 VTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp EEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred EEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 578999999999999999876 667777755446676666653
No 390
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=96.40 E-value=0.0016 Score=43.10 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=23.0
Q ss_pred CCCcccccccCCcc--ccceEEEcCce
Q psy3452 42 CTEHGPLCKEYDIK--GYPTFHHLALT 66 (116)
Q Consensus 42 ~~~~~~~~~~~~v~--~~Pt~~~~~~~ 66 (116)
|+.+++++++|+|+ ++||+++|++|
T Consensus 67 ~~~~~~l~~~~~V~~~~~PTl~~f~~G 93 (240)
T 2qc7_A 67 DKLNMELSEKYKLDKESYPVFYLFRDG 93 (240)
T ss_dssp SCCSHHHHHHTTCCGGGCSEEEEEETT
T ss_pred chhhHHHHHHcCCCCCCCCEEEEEeCC
Confidence 78889999999999 99999999875
No 391
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=96.31 E-value=0.0029 Score=39.83 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=30.1
Q ss_pred eeeEEEEeccCccchhhhc--------CCCCCCEEEEec-CCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEY--------DIKGYPTFQYFH-YFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~--------~v~~~Pt~~~~~-~g~~~ 106 (116)
++.+.++|.++..++.+.| ++.++||+++++ +|+.+
T Consensus 74 ~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 74 AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPF 118 (173)
T ss_dssp HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCEE
T ss_pred cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCCce
Confidence 4677889999889999888 999999999996 55443
No 392
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.23 E-value=0.0097 Score=36.25 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=41.6
Q ss_pred EEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC--CCcccccccCCccc--cceEEEcC
Q psy3452 7 FYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC--TEHGPLCKEYDIKG--YPTFHHLA 64 (116)
Q Consensus 7 F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~--~~~~~~~~~~~v~~--~Pt~~~~~ 64 (116)
|....-..-..+.+.++++++.+++ ++.|+.+|. +......+.+|++. .|++.+++
T Consensus 39 f~~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~ 98 (147)
T 3bj5_A 39 FLPKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSDHTDNQRILEFFGLKKEECPAVRLIT 98 (147)
T ss_dssp ECCTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEE
T ss_pred EecCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEe
Confidence 4433333455678899999999987 799999998 55556778889885 89888765
No 393
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.22 E-value=0.0023 Score=46.27 Aligned_cols=58 Identities=19% Similarity=0.363 Sum_probs=40.4
Q ss_pred cCCCHHHHhhhHHHHHHHHHhcc---CcceEEEEEeCCCcccccccCCccccceEEEcCce
Q psy3452 9 SPGCGYCKKAKPEYVKAAEVLKD---NHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 9 a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
-+.|..=......+.+......+ .+.+.+++||++++++++++|+|+++||+++|+++
T Consensus 54 C~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~g 114 (470)
T 3qcp_A 54 CGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPR 114 (470)
T ss_dssp CHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEES
T ss_pred CHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECC
Confidence 34454444444444444332211 01699999999999999999999999999999643
No 394
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.17 E-value=0.0034 Score=33.25 Aligned_cols=30 Identities=10% Similarity=-0.010 Sum_probs=23.5
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCcc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.+..++ +.+++++|+|+++||+++ +|+.
T Consensus 31 ~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~ 60 (77)
T 1ilo_A 31 DAEFEKIK---EMDQILEAGLTALPGLAV--DGEL 60 (77)
T ss_dssp CEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEE
T ss_pred ceEEEEec---CHHHHHHCCCCcCCEEEE--CCEE
Confidence 34556666 778999999999999998 6654
No 395
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.09 E-value=0.0037 Score=36.30 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=30.1
Q ss_pred eeeEEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
++.+..+|.+++.+++.+|+++ +|+++++.+|+.+
T Consensus 58 ~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v 92 (107)
T 2fgx_A 58 WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL 92 (107)
T ss_dssp CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE
T ss_pred CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE
Confidence 3677889999999999999997 9999999888654
No 396
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=96.08 E-value=0.0032 Score=39.27 Aligned_cols=36 Identities=11% Similarity=-0.077 Sum_probs=30.2
Q ss_pred eeeEEEEeccCccchhhhcC---CCCCCEEEEecCCccc
Q psy3452 71 RLALAAIDCTEHGPLCKEYD---IKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 71 ~~~~~~v~~~~~~~~~~~~~---v~~~Pt~~~~~~g~~~ 106 (116)
++.+..++.+.+.+++++|. ++++||++++++|+++
T Consensus 85 ~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 85 NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 56778888888888999897 9999999999887554
No 397
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.07 E-value=0.019 Score=37.50 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=30.9
Q ss_pred eEEEEEEcCCCHHHHhhhHH-HHHHHHHhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPE-YVKAAEVLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~-~~~~~~~~~~~~~~~~~~vd~ 42 (116)
++++.|....||+|+++.+. +.++.+.+.+.+++.+...+.
T Consensus 41 vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 41 ILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 57899999999999999986 478888885444555554443
No 398
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=96.06 E-value=0.043 Score=31.55 Aligned_cols=58 Identities=9% Similarity=0.174 Sum_probs=49.0
Q ss_pred EEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 5 ILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 5 v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
..|.+..-+...+....+.++.+.+-..+...+--+|..+++.+++.+++-.+||++-
T Consensus 15 lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK 72 (105)
T 1t4y_A 15 LQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVK 72 (105)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhc
Confidence 3577888889998888999988777633478899999999999999999999999973
No 399
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.96 E-value=0.025 Score=35.28 Aligned_cols=40 Identities=25% Similarity=0.421 Sum_probs=29.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHH-HHHHHHhccCcceEEEEEe
Q psy3452 2 FYSILFYSPGCGYCKKAKPEY-VKAAEVLKDNHKVALAAID 41 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~-~~~~~~~~~~~~~~~~~vd 41 (116)
+.++.|+...||+|..+.+.+ .++.+.+.+.+++.+....
T Consensus 13 ~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 13 PLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred eEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 468899999999999999988 5777788653344444433
No 400
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.91 E-value=0.0054 Score=34.09 Aligned_cols=31 Identities=10% Similarity=0.188 Sum_probs=26.5
Q ss_pred EEEEeccCccchhhhcCCCCCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHGPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+..+|.+++.+++++|+++ +|++++ .+|+.+
T Consensus 29 ~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v 59 (87)
T 1ttz_A 29 FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL 59 (87)
T ss_dssp EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE
T ss_pred eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE
Confidence 4678989999999999998 999998 677654
No 401
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=95.63 E-value=0.026 Score=34.57 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=24.7
Q ss_pred eEEEEecc-CccchhhhcCCCCCCEEEEec-CCccc
Q psy3452 73 ALAAIDCT-EHGPLCKEYDIKGYPTFQYFH-YFNKQ 106 (116)
Q Consensus 73 ~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~-~g~~~ 106 (116)
.+..++.+ ...+++.++++.++||+++++ +|+.+
T Consensus 79 ~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 79 KFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp TCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred CeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 34555544 345678899999999999997 66554
No 402
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.63 E-value=0.019 Score=36.20 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=29.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHh-ccCcceEEEEEe
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVL-KDNHKVALAAID 41 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~~~~vd 41 (116)
++++.|....||+|+++.+.+.++.+++ ++ ++.+.--+
T Consensus 16 vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g--~v~~v~r~ 54 (182)
T 3gn3_A 16 RLFEVFLEPTCPFSVKAFFKLDDLLAQAGED--NVTVRIRL 54 (182)
T ss_dssp EEEEEEECTTCHHHHHHHTTHHHHHHHHCTT--TEEEEEEE
T ss_pred EEEEEEECCCCHhHHHHHHHHHHHHHHhCCC--CEEEEEEE
Confidence 5789999999999999999888877666 44 45554433
No 403
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=95.43 E-value=0.022 Score=33.75 Aligned_cols=52 Identities=10% Similarity=0.096 Sum_probs=33.4
Q ss_pred EEEEEEcCCCHHHH------hhhHHHHHHHHHhccCcceEEEEEeCCCccc----ccccC--------CccccceEEE
Q psy3452 3 YSILFYSPGCGYCK------KAKPEYVKAAEVLKDNHKVALAAIDCTEHGP----LCKEY--------DIKGYPTFHH 62 (116)
Q Consensus 3 v~v~F~a~wC~~C~------~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~----~~~~~--------~v~~~Pt~~~ 62 (116)
|++.|.++.|+.|. +....|+. . .+.|..+|++.+++ +.++. |...+|.+++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~-------k-gV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA-------N-KIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH-------T-TCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH-------C-CCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 35668899999994 43333332 2 58888999886643 33455 5667776653
No 404
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.43 E-value=0.011 Score=36.36 Aligned_cols=35 Identities=3% Similarity=0.064 Sum_probs=26.2
Q ss_pred eeEEEEeccCccc-hhhhcCC--CCCCEEEEe-cCCccc
Q psy3452 72 LALAAIDCTEHGP-LCKEYDI--KGYPTFQYF-HYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~~-~~~~~~v--~~~Pt~~~~-~~g~~~ 106 (116)
+.+..++++.+.. ++++|++ .++||++++ ++|+.+
T Consensus 79 ~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~ 117 (164)
T 1sen_A 79 HNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVH 117 (164)
T ss_dssp TTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBC
T ss_pred CeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEE
Confidence 5566777776666 7888888 669999999 566543
No 405
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=95.26 E-value=0.0068 Score=42.44 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=16.3
Q ss_pred EEEEEcCCCHHHHhhhH-HHHH
Q psy3452 4 SILFYSPGCGYCKKAKP-EYVK 24 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~-~~~~ 24 (116)
++.|..+||+.|++... .+++
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~ 284 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEK 284 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEEcCCCcchHHHHHHHHHH
Confidence 56689999999999765 4554
No 406
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=95.26 E-value=0.076 Score=34.02 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=29.6
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHH-HhccCcceEEEEEeC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAE-VLKDNHKVALAAIDC 42 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~-~~~~~~~~~~~~vd~ 42 (116)
++++.|....||+|+++.+.+....+ .|-+.+++.+.--+.
T Consensus 17 vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 17 LRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 57899999999999999987755544 774444565554443
No 407
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.09 E-value=0.018 Score=42.42 Aligned_cols=50 Identities=32% Similarity=0.470 Sum_probs=33.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc-------ccccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH-------GPLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-------~~~~~~~~v~~~Pt~~ 61 (116)
++.|..+||+.|.+....+++. .+.+..+|++.. +.+.+..+...+|.+.
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~--------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~ 76 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEA--------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQMF 76 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEEE
Confidence 5679999999999999888853 233445555432 2233356778899884
No 408
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=94.98 E-value=0.045 Score=31.53 Aligned_cols=63 Identities=19% Similarity=0.147 Sum_probs=51.4
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++..|-+-.-+.+.+....+.++.+.+-+. ...+--+|..+++.+++.+++-.+||++-.-+
T Consensus 8 ~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~-~y~LeVIDv~~~PelAe~~~IvAtPTLiK~~P 70 (105)
T 1wwj_A 8 YVLKLYVAGNTPNSVRALKMLKNILEQEFQG-VYALKVIDVLKNPQLAEEDKILATPTLAKILP 70 (105)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCSCCTTCEEECHHHHGGGSC
T ss_pred eEEEEEEeCCCchHHHHHHHHHHHHHHhcCC-CeEEEEEEcccCHhHHhHCCeEEechhhhcCC
Confidence 4566677778888999888998887666533 78999999999999999999999999984443
No 409
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=94.96 E-value=0.036 Score=36.41 Aligned_cols=55 Identities=9% Similarity=0.034 Sum_probs=43.3
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+++|-|++++|. ...+.+.++++.+.+ .+.|+.. .+++++++++++. |++++|++
T Consensus 27 v~vVgff~~~~~---~~~~~F~~~A~~lr~--~~~F~~t---~~~~v~~~~~v~~-p~ivlfk~ 81 (250)
T 3ec3_A 27 VVILGVFQGVGD---PGYLQYQDAANTLRE--DYKFHHT---FSTEIAKFLKVSL-GKLVLMQP 81 (250)
T ss_dssp CEEEEECSCTTC---HHHHHHHHHHHHHTT--TCCEEEE---CCHHHHHHHTCCS-SEEEEECC
T ss_pred eEEEEEEcCCCc---hHHHHHHHHHHhhhc--CcEEEEE---CcHHHHHHcCCCC-CeEEEEec
Confidence 468888998864 577899999999976 5777765 3567788899887 99999874
No 410
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=94.74 E-value=0.047 Score=32.54 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=26.1
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
+..|+.++|+.|++....+++. .+.+..+|..+++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~--------gi~y~~~di~~~~ 37 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH--------EIPFVERNIFSEP 37 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCEEEEETTTSC
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCceEEEEccCCC
Confidence 4568899999999988888752 4666677776653
No 411
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=94.71 E-value=0.076 Score=34.81 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=44.9
Q ss_pred EEEEEEcCCCH---HHH-hhhHHHHHHHHHhccCc-ceEEEEEeCCCcccccccCCc----cccceEEEcCc
Q psy3452 3 YSILFYSPGCG---YCK-KAKPEYVKAAEVLKDNH-KVALAAIDCTEHGPLCKEYDI----KGYPTFHHLAL 65 (116)
Q Consensus 3 v~v~F~a~wC~---~C~-~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v----~~~Pt~~~~~~ 65 (116)
++|.|+...+. .+. .+...+.++++.+.+++ .+.++.+|.+....+.+.+|+ ...|++.+++.
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~ 203 (252)
T 2h8l_A 132 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA 203 (252)
T ss_dssp EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECT
T ss_pred eEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeC
Confidence 45556544332 222 46778888999998722 499999999988888889999 35899988753
No 412
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=93.94 E-value=0.037 Score=37.58 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=17.6
Q ss_pred ccchhhhcCCCCCCEEEEecCCc
Q psy3452 82 HGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 82 ~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
+.+++++++|+++||+++ +|+
T Consensus 240 ~~~la~~~gI~~vPT~~i--~G~ 260 (291)
T 3kp9_A 240 QAQECTEAGITSYPTWII--NGR 260 (291)
T ss_dssp CCHHHHTTTCCSTTEEEE--TTE
T ss_pred HHHHHHHcCCcccCeEEE--CCE
Confidence 788999999999999665 554
No 413
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.93 E-value=0.06 Score=36.25 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=22.9
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHH
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEV 28 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~ 28 (116)
.+++.|+-+.||+|+++.+.+++..+.
T Consensus 149 ~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 149 KILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp CEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred eEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 468889999999999999999865543
No 414
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=93.56 E-value=0.022 Score=30.55 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=21.5
Q ss_pred eEEEEecc-CccchhhhcCCCCCCEEEEecCCc
Q psy3452 73 ALAAIDCT-EHGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 73 ~~~~v~~~-~~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
.+..++.+ ++.+++++++++++||+++ +|+
T Consensus 34 ~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 34 EIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred EEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 34444443 4677889999999999987 554
No 415
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.54 E-value=0.12 Score=30.33 Aligned_cols=35 Identities=26% Similarity=0.463 Sum_probs=26.0
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
+..|+.++|+.|++....+++- .+.+..+|..+++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~--------gi~~~~~di~~~~ 36 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH--------DVVFQEHNIMTSP 36 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT--------TCCEEEEETTTSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHc--------CCCeEEEecccCC
Confidence 3468899999999998887741 4667777776553
No 416
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=93.20 E-value=0.09 Score=30.44 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=24.8
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
+..|+.++|+.|++....+++. .+.+..+|..++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~--------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH--------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT--------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC--------CCceEEEeecCC
Confidence 3468899999999988887751 466666766544
No 417
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=92.85 E-value=0.22 Score=29.13 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=25.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
+..|+.++|+.|++....+++- .+.+..+|..+++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~--------gi~~~~~di~~~~ 39 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL--------AWDYDAIDIKKNP 39 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCEEEEETTTSC
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCceEEEEeccCc
Confidence 3457899999999998887752 4667777776654
No 418
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.49 E-value=0.13 Score=30.06 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=24.4
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
+..|+.++|+.|++....+++. .+.+..+|..++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~--------gi~y~~~di~~~ 40 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH--------GIDYTFHDYKKE 40 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc--------CCcEEEEeeeCC
Confidence 4457899999999998888762 355556666543
No 419
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=91.98 E-value=0.012 Score=33.88 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=20.6
Q ss_pred CCCcccccccCCccccceEEEcCce
Q psy3452 42 CTEHGPLCKEYDIKGYPTFHHLALT 66 (116)
Q Consensus 42 ~~~~~~~~~~~~v~~~Pt~~~~~~~ 66 (116)
++....+++++++.++||++++++|
T Consensus 73 ~~~~~~~~~~~~i~~~Pt~~~~~~G 97 (118)
T 1zma_A 73 LNDLQAFRSRYGIPTVPGFVHITDG 97 (118)
T ss_dssp HHHHHHHHHHHTCCSSCEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCCeEEEEECC
Confidence 4455678899999999999998764
No 420
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=91.21 E-value=0.21 Score=30.58 Aligned_cols=31 Identities=10% Similarity=0.163 Sum_probs=23.3
Q ss_pred eeEEEEecc--CccchhhhcCCCCCCEEEEecC
Q psy3452 72 LALAAIDCT--EHGPLCKEYDIKGYPTFQYFHY 102 (116)
Q Consensus 72 ~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~ 102 (116)
+.+..+|.+ ++..+.++|++.++|++++++.
T Consensus 78 fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~ 110 (153)
T 2dlx_A 78 FIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDP 110 (153)
T ss_dssp EEEEEEESSSHHHHHHHHHHTCCSSSEEEEECT
T ss_pred eEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeC
Confidence 445555554 3456889999999999999965
No 421
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=90.95 E-value=0.13 Score=27.36 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=22.9
Q ss_pred eeEEEEeccCcc----chhhhcC--CCCCCEEEEecCCccc
Q psy3452 72 LALAAIDCTEHG----PLCKEYD--IKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 72 ~~~~~v~~~~~~----~~~~~~~--v~~~Pt~~~~~~g~~~ 106 (116)
+.+..+|.+.+. ++.++++ +.++|++++ +|+.+
T Consensus 31 i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g~~i 69 (85)
T 1ego_A 31 FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQQHI 69 (85)
T ss_dssp CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TTEEE
T ss_pred ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CCEEE
Confidence 456667765443 7888899 999999843 55543
No 422
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=90.69 E-value=0.3 Score=28.63 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=26.8
Q ss_pred CCCHHHHhhhHHHHHHHHHhccCcce-EEEEEeCCCcccc----cccCCccccceEE
Q psy3452 10 PGCGYCKKAKPEYVKAAEVLKDNHKV-ALAAIDCTEHGPL----CKEYDIKGYPTFH 61 (116)
Q Consensus 10 ~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~----~~~~~v~~~Pt~~ 61 (116)
|.|+.|.+....+.+. .+ .+..+|.+.++++ .+..+...+|.+.
T Consensus 33 P~C~fc~~ak~lL~~~--------gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIF 81 (118)
T 2wul_A 33 PQCGFSNAVVQILRLH--------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY 81 (118)
T ss_dssp BSSHHHHHHHHHHHHT--------TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEE
T ss_pred CCCHHHHHHHHHHHHh--------CCcCeEeecccCCHHHHHHHHHhccCCCCCeEe
Confidence 5799999988777542 22 3556676666533 3334555666664
No 423
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=90.61 E-value=0.24 Score=29.03 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=25.5
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
+..|+.++|+.|++....+++- .+.+..+|..+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~--------gi~~~~~di~~~~ 40 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN--------NIEYTNRLIVDDN 40 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTTC
T ss_pred EEEEECCCChHHHHHHHHHHHc--------CCceEEEecccCc
Confidence 3457899999999988877741 4666667776554
No 424
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=90.50 E-value=0.14 Score=30.96 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=25.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
|.-+..|+.++|+.|++....+++ . .+.+..+|..++
T Consensus 1 M~~itiY~~p~C~~crkak~~L~~-----~---gi~~~~idi~~~ 37 (141)
T 1s3c_A 1 MSNITIYHNPASGTSRNTLEMIRN-----S---GTEPTIILYLEN 37 (141)
T ss_dssp --CCEEECCTTCHHHHHHHHHHHH-----T---TCCCEEECTTTS
T ss_pred CCcEEEEECCCChHHHHHHHHHHH-----c---CCCEEEEECCCC
Confidence 333556889999999998888775 1 466666777654
No 425
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=90.37 E-value=1.1 Score=26.34 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=28.2
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT 43 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 43 (116)
.++|.|..|-|+-|......+.+ +.+ ...+.++|.-
T Consensus 3 ~tLILfGKP~C~vCe~~s~~l~~----led--eY~ilrVNIl 38 (124)
T 2g2q_A 3 NVLIIFGKPYCSICENVSDAVEE----LKS--EYDILHVDIL 38 (124)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHT----TTT--TEEEEEEECC
T ss_pred ceEEEeCCCccHHHHHHHHHHHH----hhc--cccEEEEEee
Confidence 57999999999999998877744 444 5677777754
No 426
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=89.88 E-value=0.13 Score=30.21 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=26.0
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG 46 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 46 (116)
|.-+..|+.++|+.|++....+++ . .+.+..+|..+++
T Consensus 4 M~~i~iY~~p~C~~c~ka~~~L~~-----~---gi~~~~~di~~~~ 41 (121)
T 3rdw_A 4 MKDVTIYHNPRCSKSRETLALVEQ-----Q---GITPQVVLYLETP 41 (121)
T ss_dssp --CCEEECCTTCHHHHHHHHHHHT-----T---TCCCEEECTTTSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHH-----c---CCCcEEEeeccCC
Confidence 333556889999999998877763 1 4566677776653
No 427
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=88.96 E-value=0.15 Score=32.58 Aligned_cols=24 Identities=17% Similarity=0.254 Sum_probs=19.6
Q ss_pred CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.+++++++|++.||+++ .+|+.
T Consensus 169 ~~~~l~~~~gV~gTPt~vi-~nG~~ 192 (211)
T 1t3b_A 169 KHYELGIQFGVRGTPSIVT-STGEL 192 (211)
T ss_dssp HHHHHHHHHTCCSSCEEEC-TTSCC
T ss_pred HHHHHHHHcCCCcCCEEEE-eCCEE
Confidence 5667889999999999998 56654
No 428
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=87.86 E-value=1.3 Score=27.93 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=29.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEE
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAA 39 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~ 39 (116)
..+..|+-.-||+|-...+.++++.+.+++.-.+.+.-
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p 40 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVV 40 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEe
Confidence 34667889999999999999999999987522343333
No 429
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=87.84 E-value=0.19 Score=28.43 Aligned_cols=22 Identities=9% Similarity=-0.053 Sum_probs=16.7
Q ss_pred cchhhhcCCCCCCEEEEecCCccc
Q psy3452 83 GPLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 83 ~~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
..+++++++.++||+ + .+|+.+
T Consensus 63 ~~l~~~~~v~~~Pt~-~-~~g~~v 84 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV-F-IGGKQI 84 (116)
T ss_dssp HHHHHHHSCCSSCEE-E-ETTEEE
T ss_pred HHHHHHhCCCCcCEE-E-ECCEEE
Confidence 458899999999999 3 355543
No 430
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=87.67 E-value=0.51 Score=26.91 Aligned_cols=31 Identities=13% Similarity=0.004 Sum_probs=22.1
Q ss_pred EEEEeccCcc-------chhhhcCCCCCCEEEEecCCccc
Q psy3452 74 LAAIDCTEHG-------PLCKEYDIKGYPTFQYFHYFNKQ 106 (116)
Q Consensus 74 ~~~v~~~~~~-------~~~~~~~v~~~Pt~~~~~~g~~~ 106 (116)
+..+|.+.+. ++.+.++++++|++++ +|+.+
T Consensus 49 ~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~i 86 (114)
T 2hze_A 49 YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSI 86 (114)
T ss_dssp EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEE
T ss_pred eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEE
Confidence 5566766553 6888899999999854 55543
No 431
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=86.83 E-value=0.26 Score=31.13 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=22.2
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHH
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEV 28 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~ 28 (116)
.+..|+-..||+|....+.++++.+.
T Consensus 9 ~I~~f~D~~CP~C~~~~~~~~~l~~~ 34 (216)
T 2in3_A 9 VLWYIADPMCSWCWGFAPVIENIRQE 34 (216)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCchhhcchHHHHHHHhc
Confidence 56778899999999888999998883
No 432
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=86.45 E-value=0.31 Score=29.06 Aligned_cols=28 Identities=14% Similarity=0.390 Sum_probs=23.8
Q ss_pred EEEeCCCcccccccCCccccceEEEcCc
Q psy3452 38 AAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 38 ~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..++.+.+..++++|++..+||+++++.
T Consensus 103 ~~~~~d~~~~~~~~~~v~~~P~~~lid~ 130 (164)
T 2h30_A 103 LPVVTDNGGTIAQNLNISVYPSWALIGK 130 (164)
T ss_dssp SCEEECTTCHHHHHTTCCSSSEEEEECT
T ss_pred ceEEEcCchHHHHHcCCCccceEEEECC
Confidence 4566788889999999999999999853
No 433
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=85.89 E-value=0.89 Score=25.32 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=24.4
Q ss_pred eeeEEEEecc--CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 71 RLALAAIDCT--EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 71 ~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.+..+|.+ ++.++.++|+ .++|+++ .+|+.
T Consensus 43 ~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~~ 76 (100)
T 1wjk_A 43 RFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQF 76 (100)
T ss_dssp SSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSSE
T ss_pred CCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCEE
Confidence 3667778877 7788999999 9999874 35544
No 434
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=85.68 E-value=1.4 Score=25.09 Aligned_cols=41 Identities=10% Similarity=0.087 Sum_probs=28.4
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+++..+.++- .+.+. .+.+..++++|++.++|++++++.
T Consensus 68 ~~~~~~~~~~~~--~~~~~---~d~~~~~~~~~~i~~~P~~~lid~ 108 (136)
T 1lu4_A 68 GAMQSFVSKYNL--NFTNL---NDADGVIWARYNVPWQPAFVFYRA 108 (136)
T ss_dssp HHHHHHHHHHTC--CSEEE---ECTTSHHHHHTTCCSSSEEEEECT
T ss_pred HHHHHHHHHcCC--CceEE---ECCchhHHHhcCCCCCCEEEEECC
Confidence 455566666543 33332 256778899999999999999854
No 435
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=85.65 E-value=0.24 Score=31.69 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=18.7
Q ss_pred CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.+++++++|++.||++ +.+|..
T Consensus 169 ~~~~l~~~~gV~gtPt~v-~~dG~~ 192 (216)
T 1eej_A 169 DHYALGVQLGVSGTPAVV-LSNGTL 192 (216)
T ss_dssp HHHHHHHHHTCCSSSEEE-CTTSCE
T ss_pred HHHHHHHHcCCCccCEEE-EcCCeE
Confidence 566788999999999994 555544
No 436
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=85.14 E-value=0.15 Score=29.81 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=20.2
Q ss_pred CCcccccccCCccccceEEEc-Cce
Q psy3452 43 TEHGPLCKEYDIKGYPTFHHL-ALT 66 (116)
Q Consensus 43 ~~~~~~~~~~~v~~~Pt~~~~-~~~ 66 (116)
+.+.+++++|++.++||++++ ++|
T Consensus 78 ~~~~~l~~~~~v~~~Pt~~~~d~~G 102 (134)
T 2fwh_A 78 AQDVALLKHLNVLGLPTILFFDGQG 102 (134)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTS
T ss_pred chHHHHHHHcCCCCCCEEEEECCCC
Confidence 567788999999999999999 443
No 437
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=85.04 E-value=2.4 Score=27.51 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=35.1
Q ss_pred HHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccc--c-ceEEEcC
Q psy3452 15 CKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKG--Y-PTFHHLA 64 (116)
Q Consensus 15 C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~--~-Pt~~~~~ 64 (116)
...+...++++++.++ ++.|+.+|.++.....+.+|+.. . |.++.++
T Consensus 152 ~~~~~~~~~~vAk~~k---ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~ 201 (250)
T 3ec3_A 152 TQFWRNKVLEVAKDFP---EYTFAIADEEDYATEVKDLGLSESGGDVNAAILD 201 (250)
T ss_dssp HHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEEC
T ss_pred HHHHHHHHHHHHHhhc---ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEc
Confidence 3457888899999887 48888899888877778888863 3 4665554
No 438
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=84.61 E-value=0.64 Score=27.10 Aligned_cols=33 Identities=15% Similarity=0.342 Sum_probs=22.8
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE 44 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 44 (116)
+..|+.++|+.|++....+++ . .+.+..+|..+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-----~---gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-----Q---GIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----T---TCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-----c---CCceEEEEecc
Confidence 345779999999999888775 1 34555555543
No 439
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=83.93 E-value=0.48 Score=29.25 Aligned_cols=23 Identities=26% Similarity=0.209 Sum_probs=17.8
Q ss_pred CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.++++++||++.||+++ +|+.
T Consensus 137 ~~~~~a~~~gv~GtPt~vv--nG~~ 159 (186)
T 3bci_A 137 KDKKIAKDNHIKTTPTAFI--NGEK 159 (186)
T ss_dssp HHHHHHHHTTCCSSSEEEE--TTEE
T ss_pred HHHHHHHHcCCCCCCeEEE--CCEE
Confidence 3456778999999999987 5544
No 440
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=83.80 E-value=0.55 Score=27.63 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcC
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLA 64 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 64 (116)
..+.+..+.++ +.+..+..+.+..+++.|++.++|++++++
T Consensus 85 ~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~~~P~~~~id 125 (156)
T 1kng_A 85 DNARRFLGRYG----NPFGRVGVDANGRASIEWGVYGVPETFVVG 125 (156)
T ss_dssp HHHHHHHHHHC----CCCSEEEEETTSHHHHHTTCCSSCEEEEEC
T ss_pred HHHHHHHHHcC----CCCceeeeCchhHHHHhcCcCccCeEEEEc
Confidence 34555555553 333334456778899999999999777764
No 441
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=83.77 E-value=2.6 Score=26.43 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=21.0
Q ss_pred eEEEEEEcCCCHHHHhhhHHHHHHHHH
Q psy3452 2 FYSILFYSPGCGYCKKAKPEYVKAAEV 28 (116)
Q Consensus 2 ~v~v~F~a~wC~~C~~~~~~~~~~~~~ 28 (116)
.++.+|..|||-......+.+.+....
T Consensus 11 ~~f~D~~CP~C~~~~~~~~~l~~~~~~ 37 (216)
T 2in3_A 11 WYIADPMCSWCWGFAPVIENIRQEYSA 37 (216)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCchhhcchHHHHHHHhcCCC
Confidence 356788889999998888888777553
No 442
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=83.23 E-value=1 Score=26.35 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 21 EYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+.+..+.++ +.+..+-.+.+..+++.|++..+|++++++.
T Consensus 77 ~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~ 117 (152)
T 2lja_A 77 AWENMVTKDQ----LKGIQLHMGTDRTFMDAYLINGIPRFILLDR 117 (152)
T ss_dssp HHHHHHHHHT----CCSEEEECSSCTHHHHHTTCCSSCCEEEECT
T ss_pred HHHHHHHhcC----CCCceeecCcchhHHHHcCcCCCCEEEEECC
Confidence 4455544443 2233444566778899999999999999973
No 443
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=82.94 E-value=0.96 Score=26.20 Aligned_cols=44 Identities=16% Similarity=-0.025 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+.+..+.++- ....+.-..+.+..+++.|++..+|++++++.
T Consensus 80 ~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~ 123 (148)
T 3fkf_A 80 EAWETAIKKDTL--SWDQVCDFTGLSSETAKQYAILTLPTNILLSP 123 (148)
T ss_dssp HHHHHHHHHTTC--CSEEECCSCGGGCHHHHHTTCCSSSEEEEECT
T ss_pred HHHHHHHHHcCC--CceEEEccCCcchHHHHhcCCCCcCEEEEECC
Confidence 345555555543 33333211122668899999999999999853
No 444
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=82.45 E-value=0.46 Score=28.93 Aligned_cols=19 Identities=21% Similarity=0.450 Sum_probs=16.2
Q ss_pred CccchhhhcCCCCCCEEEE
Q psy3452 81 EHGPLCKEYDIKGYPTFQY 99 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~ 99 (116)
++.++++++||+++||+++
T Consensus 132 ~~~~~a~~~gv~gtPt~~i 150 (175)
T 3gyk_A 132 QSMALAQKLGFNGTPSFVV 150 (175)
T ss_dssp HHHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHHcCCccCCEEEE
Confidence 4566888999999999987
No 445
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=80.82 E-value=0.76 Score=26.02 Aligned_cols=24 Identities=25% Similarity=0.526 Sum_probs=20.5
Q ss_pred CCCcccccccCCccccceEEEcCc
Q psy3452 42 CTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 42 ~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
.+.+..++++|++.++|++++++.
T Consensus 90 ~d~~~~~~~~~~v~~~P~~~lid~ 113 (138)
T 4evm_A 90 VDPSGKLLETYGVRSYPTQAFIDK 113 (138)
T ss_dssp ECTTCHHHHHTTCCSSSEEEEECT
T ss_pred ECcchHHHHHcCcccCCeEEEECC
Confidence 456778999999999999999954
No 446
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=81.58 E-value=0.33 Score=28.19 Aligned_cols=25 Identities=16% Similarity=0.297 Sum_probs=20.2
Q ss_pred eCCCcccccccCCccccceEEEcCc
Q psy3452 41 DCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 41 d~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+....+++.|++..+|++++++.
T Consensus 93 ~~~~~~~~~~~~~v~~~P~~~lid~ 117 (143)
T 2lus_A 93 RSGPASNVTAKYGITGIPALVIVKK 117 (143)
Confidence 3445567899999999999999983
No 447
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=80.30 E-value=0.73 Score=29.08 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=19.2
Q ss_pred CccchhhhcCCCCCCEEEEecCCc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFN 104 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~ 104 (116)
++.+.++++||+++||+++.++|+
T Consensus 157 ~~~~~a~~~gv~g~Pt~~v~~~~~ 180 (208)
T 3kzq_A 157 DQLSLAKSLGVNSYPSLVLQINDA 180 (208)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTE
T ss_pred HHHHHHHHcCCCcccEEEEEECCE
Confidence 445667789999999999987664
No 448
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=79.30 E-value=0.71 Score=30.05 Aligned_cols=22 Identities=14% Similarity=0.279 Sum_probs=18.3
Q ss_pred CccchhhhcCCCCCCEEEEecC
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHY 102 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~ 102 (116)
.+.+++++++|++.||+++.+.
T Consensus 187 ~~~~l~~~~gv~gtPt~vi~~~ 208 (241)
T 1v58_A 187 DNEKLMDDLGANVTPAIYYMSK 208 (241)
T ss_dssp HHHHHHHHHTCCSSCEEEEEET
T ss_pred HHHHHHHHcCCCCCCEEEEECC
Confidence 4556788999999999999863
No 449
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=78.70 E-value=0.67 Score=28.21 Aligned_cols=19 Identities=11% Similarity=0.245 Sum_probs=16.0
Q ss_pred CccchhhhcCCCCCCEEEE
Q psy3452 81 EHGPLCKEYDIKGYPTFQY 99 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~ 99 (116)
++.+.++++||++.||+++
T Consensus 138 ~~~~~a~~~gv~gTPtfiI 156 (184)
T 4dvc_A 138 RFDKQFQDSGLTGVPAVVV 156 (184)
T ss_dssp HHHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHHcCCCcCCEEEE
Confidence 4456788999999999987
No 450
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=78.64 E-value=1.9 Score=25.31 Aligned_cols=44 Identities=9% Similarity=-0.071 Sum_probs=29.6
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCC--ccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYD--IKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~--v~~~Pt~~~~~~ 65 (116)
+.+.+..+.++- .+..+..+......+++.|+ +..+|++++++.
T Consensus 69 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~ 114 (151)
T 3raz_A 69 DNIGNFLKQTPV--SYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAP 114 (151)
T ss_dssp HHHHHHHHHSCC--SSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEET
T ss_pred HHHHHHHHHcCC--CCceEecCccchHHHHHHhCCccCCCCEEEEECC
Confidence 345555555543 44555544556677889999 999999998854
No 451
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=78.48 E-value=3.1 Score=24.90 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=26.6
Q ss_pred ceeeEEEEec--cCccchhhhcCCCC--CCEEEEecC
Q psy3452 70 IRLALAAIDC--TEHGPLCKEYDIKG--YPTFQYFHY 102 (116)
Q Consensus 70 ~~~~~~~v~~--~~~~~~~~~~~v~~--~Pt~~~~~~ 102 (116)
+++.++.+|. ..+..+.+.||++. .|++.++..
T Consensus 63 gki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~ 99 (147)
T 3bj5_A 63 GKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITL 99 (147)
T ss_dssp TTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEEC
T ss_pred CceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEec
Confidence 4688899997 55556888999986 899999964
No 452
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=78.23 E-value=1.7 Score=25.44 Aligned_cols=44 Identities=14% Similarity=0.008 Sum_probs=27.8
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+++..+.++- ....+.-....+..+++.|++..+|++++++.
T Consensus 82 ~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~ 125 (150)
T 3fw2_A 82 QQWKDAIKRDTL--DWEQVCDFGGLNSEVAKQYSIYKIPANILLSS 125 (150)
T ss_dssp HHHHHHHHHTTC--CSEEECCSCGGGCHHHHHTTCCSSSEEEEECT
T ss_pred HHHHHHHHHhCC--CceEEEcCcccchHHHHHcCCCccCeEEEECC
Confidence 455555555543 33333211112567899999999999999964
No 453
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=78.18 E-value=0.94 Score=26.53 Aligned_cols=26 Identities=12% Similarity=0.203 Sum_probs=21.7
Q ss_pred EeCCCcccccccCCccccceEEEcCc
Q psy3452 40 IDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 40 vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
+..+.+..+++.|++..+|++++++.
T Consensus 90 ~~~d~~~~~~~~~~i~~~P~~~lid~ 115 (153)
T 2l5o_A 90 VMYDADKAVGQAFGTQVYPTSVLIGK 115 (153)
T ss_dssp EEECSSCHHHHHHTCCSSSEEEEECS
T ss_pred EEcCchHHHHHHcCCCccCeEEEECC
Confidence 44567788999999999999999854
No 454
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=77.75 E-value=1 Score=28.45 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=17.7
Q ss_pred CccchhhhcCCCCCCEEEEecCCcc
Q psy3452 81 EHGPLCKEYDIKGYPTFQYFHYFNK 105 (116)
Q Consensus 81 ~~~~~~~~~~v~~~Pt~~~~~~g~~ 105 (116)
++.+.++++||++.||+++ +|+.
T Consensus 151 ~~~~~a~~~gV~gtPtfvv--nG~~ 173 (202)
T 3gha_A 151 KDSDLNQKMNIQATPTIYV--NDKV 173 (202)
T ss_dssp HHHHHHHHTTCCSSCEEEE--TTEE
T ss_pred HHHHHHHHcCCCcCCEEEE--CCEE
Confidence 4456778999999999998 4543
No 455
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=74.73 E-value=1.3 Score=28.71 Aligned_cols=25 Identities=16% Similarity=0.090 Sum_probs=18.7
Q ss_pred Cccchhhh-cCCCCCCEEEEec-CCcc
Q psy3452 81 EHGPLCKE-YDIKGYPTFQYFH-YFNK 105 (116)
Q Consensus 81 ~~~~~~~~-~~v~~~Pt~~~~~-~g~~ 105 (116)
++.+.+++ +||++.||+++.. +|+.
T Consensus 158 ~~~~~a~~~~GV~GtPtfvv~~~nG~~ 184 (226)
T 3f4s_A 158 NDKSLAINKLGITAVPIFFIKLNDDKS 184 (226)
T ss_dssp HHHHHHHHHHCCCSSCEEEEEECCTTC
T ss_pred HHHHHHHHHcCCCcCCEEEEEcCCCEE
Confidence 44567778 9999999999964 4443
No 456
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=71.84 E-value=6.5 Score=24.46 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=27.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAI 40 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~v 40 (116)
+..|+-.-||.|....+.++++.+.++- .+.+..+
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~~--~v~~~p~ 37 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYGL--TIRYNAI 37 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHCC--EEEEEEC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCC--eEEEEee
Confidence 5668899999999999999999998853 4555444
No 457
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=70.22 E-value=1.7 Score=26.45 Aligned_cols=42 Identities=14% Similarity=0.118 Sum_probs=27.6
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+.+..+.++- .+..+-.+.+..+++.|++..+|+.++++.
T Consensus 100 ~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~v~~~P~~~lid~ 141 (176)
T 3kh7_A 100 AAAIKWLNELHN----PYLLSISDADGTLGLDLGVYGAPETYLIDK 141 (176)
T ss_dssp HHHHHHHHHTTC----CCSEEEEETTCHHHHHHTCCSSCEEEEECT
T ss_pred HHHHHHHHHcCC----CCceEEECCcchHHHHcCCCCCCeEEEECC
Confidence 455555565532 222233446678899999999998888764
No 458
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}
Probab=68.92 E-value=15 Score=22.41 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=35.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++..- .+....++.+..+++.+..-...+|++..
T Consensus 1 m~~~~Ly~~~~s~~~~~vr~~L~~~gi------~ye~~~v~~~~~~~~~~~~P~g~vP~L~~ 56 (206)
T 2on5_A 1 MVHYKLTYFAGRGLAEPIRQIFALAGQ------KYEDVRYTFQEWPKHKDEMPFGQIPVLEE 56 (206)
T ss_dssp CCCEEEEEESSSGGGHHHHHHHHHHTC------CCEEEEECTTTGGGGGGGSTTSCSCEEEE
T ss_pred CCceEEEecCCCcchHHHHHHHHHcCC------CceEEEecHHHHHHhccCCCCCCCCEEEE
Confidence 556677888999999987766654321 34555666544444444444557898863
No 459
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}
Probab=68.28 E-value=12 Score=22.91 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=35.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++. +- .+....++.+..+++.+..-...+|++..
T Consensus 1 m~~~~Ly~~~~s~~~~~v~~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~P~g~vP~L~~ 56 (204)
T 2ws2_A 1 MVHYKLTYFNGRGAAEIIRQVFVLA-----GQ-DYEDVRLTHEEWPKHKASMPFGQLPVLEV 56 (204)
T ss_dssp CCCEEEEEESSSGGGHHHHHHHHHT-----TC-CCEEEEECTTTGGGTGGGSTTSCSCEEEE
T ss_pred CCccEEEEeCCCchHHHHHHHHHHc-----CC-CceEEEecHhhHHHhhhcCCCCCCCEEEE
Confidence 6667788889999999877665542 21 35556666544444444444557898863
No 460
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*
Probab=63.40 E-value=8.1 Score=24.57 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=32.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|..+..++.++|+.|.+.+-.++...- .+....++....+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~sp~~~~v~~~L~~~gi------~ye~~~v~~~~~~~~~~~nP~g~vPvL~~ 56 (242)
T 3ubk_A 1 MVMIKLHGASISNYVNKVKLGILEKGL------EYEQIRIAPSQEEDFLKISPMGKIPVLEM 56 (242)
T ss_dssp -CCEEEESCTTCHHHHHHHHHHHHHTC------CEEEECCCCCCCHHHHTTSTTCCSCEEEE
T ss_pred CCeEEEEeCCCChHHHHHHHHHHHcCC------CcEEEecCCccCHHHHhcCCCCCcCeEEE
Confidence 555677889999999987766665422 23333333333344444444447887753
No 461
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=63.01 E-value=7.5 Score=24.17 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=32.9
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 61 (116)
+..++.++|+.|.+..-.+++..- .+....+|..+.+...+......+|++.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~gi------~~~~~~v~~~~~~~~~~~~p~~~vP~l~ 55 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLKNI------PVELNVLQNDDEATPTRMIGQKMVPILQ 55 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTC------CCEEEECCTTCCHHHHHHHSSSCSCEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHcCC------ceEEEECCCcchhhhhhcCCCceeeeEE
Confidence 346788999999998766654321 3556666665544333444445788776
No 462
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=62.81 E-value=14 Score=23.08 Aligned_cols=55 Identities=9% Similarity=-0.025 Sum_probs=32.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|. +..++.++|+.|.+..-.++...- .+....++....+++.+..-...+|++..
T Consensus 1 M~-~~Ly~~~~sp~~~~v~~~L~~~gi------~ye~~~v~~~~~~~~~~~~P~g~vP~L~~ 55 (229)
T 3lxz_A 1 MS-LKLYGFSVSNYYNMVKLALLEKGL------TFEEVTFYGGQAPQALEVSPRGKVPVLET 55 (229)
T ss_dssp -C-EEEEECTTCHHHHHHHHHHHHTTC------CEEEEECCCCSCHHHHTTSTTSCSCEEEE
T ss_pred Ce-EEEEeCCCCchHHHHHHHHHHcCC------CCEEEecCCCCCHHHHhhCCCCCcCeEEe
Confidence 44 567889999999987766654211 23444444333444444444457888763
No 463
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=62.71 E-value=18 Score=22.53 Aligned_cols=41 Identities=15% Similarity=0.204 Sum_probs=33.4
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH 45 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 45 (116)
..+.++++.|+-|.-+...++.+++.++. .+.+-.+.+...
T Consensus 130 l~l~Y~S~R~gl~~~~~Gli~~~A~~f~~--~v~i~~~~~~~~ 170 (189)
T 3tfg_A 130 MELHYQSTRCGLAPMVLGLLHGLGKRFQT--KVEVTQTAFRET 170 (189)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHHHHHTTC--EEEEEEEECTTT
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHhCC--CeEEEEEeccCC
Confidence 46788899999999999999999998866 677777766543
No 464
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=60.76 E-value=32 Score=22.50 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=29.6
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
+..|+.++|+.|.+..-.+++. +- .+....+|.....++ +......+|++..
T Consensus 15 ~~Ly~~~~sp~~~~v~~~L~~~-----gi-~~~~~~v~~~~~~~~-~~~p~~~vP~l~~ 66 (290)
T 1z9h_A 15 LTLYQYKTCPFCSKVRAFLDFH-----AL-PYQVVEVNPVLRAEI-KFSSYRKVPILVA 66 (290)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TC-CEEEEECCTTTCGGG-TTCSCCSSCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CC-CeEEEECChhhHHHH-HHcCCCCCCEEEE
Confidence 5567889999999877666542 11 234444443222222 2334457887753
No 465
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans}
Probab=59.40 E-value=14 Score=22.60 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=35.2
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCccccccc--CCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKE--YDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~--~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++..- .+....++.+..+++.+. .-...+|++..
T Consensus 1 M~~~~Ly~~~~s~~~~~v~~~L~~~gi------~~e~~~v~~~~~~~~~~~~~~P~g~vP~L~~ 58 (207)
T 1zl9_A 1 MVSYKLTYFNGRGAGEVSRQIFAYAGQ------QYEDNRVTQEQWPALKETCAAPFGQLPFLEV 58 (207)
T ss_dssp CCCEEEEEESSSGGGHHHHHHHHHHTC------CCEEEEECTTTHHHHHHTTCSTTSCSCEEEE
T ss_pred CCceEEEEcCCCchHHHHHHHHHHcCC------CceEEEecHHHHHHHhhccCCCCCCCCEEEE
Confidence 566777888999999988766665321 355566665443444333 34457888863
No 466
>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*
Probab=57.92 E-value=29 Score=21.16 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=30.5
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-----cccccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-----HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-----~~~~~~~~~v~~~Pt~~ 61 (116)
+..++.++|+.|.+.+-.++...-.+ ....++... .+++.+..-...+|++.
T Consensus 3 ~~Ly~~~~s~~~~~v~~~L~~~gi~y------~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~ 59 (214)
T 4id0_A 3 LTLFHNPASPYVRKVMVLLHETGQLN------RVALQASQLSPVAPDAALNQDNPLGKIPALR 59 (214)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTCGG------GEEEEECCCCSSSCCSSCCTTCTTCCSSEEE
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCc------ceEEeecccCccCCcHHHHhcCCCcCCCeEE
Confidence 55688999999998877777653333 233344331 23333333345688775
No 467
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=55.77 E-value=16 Score=22.36 Aligned_cols=56 Identities=14% Similarity=0.059 Sum_probs=32.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC----cccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE----HGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~ 62 (116)
|..+..++.+.|+.|.+.+-.++.. +- .+....++... .+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~s~~~~~v~~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~ 60 (210)
T 3m3m_A 1 MSLYKVYGDYRSGNCYKIKLMLNLL-----GL-PYEWQAVDILGGDTQTEAFLAKNPNGKIPVLEL 60 (210)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHT-----TC-CEEEEECCTTTTTTSSHHHHTTCTTCCSCEEEE
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHc-----CC-CCEEEEecCCCccccCHHHHhhCCCCCCCEEEe
Confidence 5556778899999998877555542 21 35555666532 233333333446887763
No 468
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=55.36 E-value=13 Score=23.50 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=22.7
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHh
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVL 29 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~ 29 (116)
.+..|+-.-||.|....+.++++.+.+
T Consensus 7 ~I~~~~D~~CP~Cy~~~~~l~~l~~~~ 33 (226)
T 1r4w_A 7 VLELFYDVLSPYSWLGFEVLCRYQHLW 33 (226)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred eEEEEEeCCChHHHHHHHHHHHHHHHc
Confidence 466677899999999999999987665
No 469
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=54.09 E-value=0.79 Score=19.22 Aligned_cols=11 Identities=27% Similarity=0.842 Sum_probs=8.8
Q ss_pred CCHHHHhhhHH
Q psy3452 11 GCGYCKKAKPE 21 (116)
Q Consensus 11 wC~~C~~~~~~ 21 (116)
.|+-|++++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 58999988764
No 470
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=53.68 E-value=18 Score=22.58 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=32.7
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC----cccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE----HGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~ 62 (116)
|..+..++.+.|+.|.+.+-.++.. +- .+....+|... .+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~sp~~~~vr~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~ 60 (225)
T 3m8n_A 1 MSLYKLYSMQRSGNSYKVRLALALL-----DA-PYRAVEVDILRGESRTPDFLAKNPSGQVPLLET 60 (225)
T ss_dssp -CCEEEEECTTCHHHHHHHHHHHHT-----TC-CEEEEECCGGGTTTSSHHHHTTCTTCCSSEEEC
T ss_pred CCceEEecCCCCCCHHHHHHHHHHc-----CC-CeEEEEeCCCCCccCCHHHHHhCCCCCCCEEEe
Confidence 5556778999999998877555542 21 35555565432 233333333457887763
No 471
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=52.15 E-value=17 Score=20.92 Aligned_cols=53 Identities=11% Similarity=0.130 Sum_probs=33.0
Q ss_pred ceEEEEEeCCCcc----------cccccCCccccceEEEcCceeeeceeeEEEEeccCccchhhhcCCCC
Q psy3452 34 KVALAAIDCTEHG----------PLCKEYDIKGYPTFHHLALTIMIIRLALAAIDCTEHGPLCKEYDIKG 93 (116)
Q Consensus 34 ~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~~~~~~v~f~~~~~~~v~~~~~~~~~~~~~v~~ 93 (116)
.+.+.+.+..+++ ++.+++|+...|.+++ ++ .....-......++++-+++..
T Consensus 40 Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V-DG------evv~~G~yPt~eEl~~~lgi~~ 102 (110)
T 3kgk_A 40 GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL-DG------ETVMAGRYPKRAELARWFGIPL 102 (110)
T ss_dssp TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE-TT------EEEEESSCCCHHHHHHHHTCCC
T ss_pred CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE-CC------EEEEeccCCCHHHHHHHhCCCc
Confidence 4888888888876 4556778888887663 22 2222222345666777666643
No 472
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=51.53 E-value=6 Score=25.50 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=24.7
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAA 39 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~ 39 (116)
.+-.|+-.-||.|--..+.++++.+.++- .+.+.-
T Consensus 7 ~I~~~~D~~CPwcyi~~~~L~~~~~~~~v--~v~~~p 41 (234)
T 3rpp_A 7 TVELFYDVLSPYSWLGFEILCRYQNIWNI--NLQLRP 41 (234)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTTSSE--EEEEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 34556688999999999999888766532 344444
No 473
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5
Probab=50.10 E-value=15 Score=22.36 Aligned_cols=56 Identities=21% Similarity=0.217 Sum_probs=34.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++. +- .+....++....+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~s~~~~~v~~~L~~~-----gi-~ye~~~v~~~~~~~~~~~~P~g~vP~L~~ 56 (206)
T 1tw9_A 1 MVHYKLTYFNGRGAGECARQVFALA-----DQ-KYEDVRLTQETFVPLKATFPFGQVPVLEV 56 (206)
T ss_dssp CCCEEEEEESSSGGGHHHHHHHHHT-----TC-CCEEEEECHHHHGGGGGGSTTSCSCEEEE
T ss_pred CCceEEEEcCCCccHHHHHHHHHHc-----CC-CceEEEeCHHHHHHHcccCCCCCCCEEEE
Confidence 6667778889999999877665542 21 34555555433333434444457898874
No 474
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=49.29 E-value=1.4 Score=19.03 Aligned_cols=20 Identities=15% Similarity=0.296 Sum_probs=15.7
Q ss_pred CCHHHHhhhHHHHHHHHHhc
Q psy3452 11 GCGYCKKAKPEYVKAAEVLK 30 (116)
Q Consensus 11 wC~~C~~~~~~~~~~~~~~~ 30 (116)
-|+.|+..+|..+.+...+.
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 38999999998887766654
No 475
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=48.57 E-value=15 Score=21.02 Aligned_cols=28 Identities=4% Similarity=0.077 Sum_probs=18.3
Q ss_pred ceEEEEEeCCCcc----------cccccCCccccceEE
Q psy3452 34 KVALAAIDCTEHG----------PLCKEYDIKGYPTFH 61 (116)
Q Consensus 34 ~~~~~~vd~~~~~----------~~~~~~~v~~~Pt~~ 61 (116)
.+.+.+.+..+++ ++.+++|+...|.++
T Consensus 43 Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~ 80 (106)
T 3ktb_A 43 GIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITL 80 (106)
T ss_dssp TCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEE
T ss_pred CCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEE
Confidence 4777777877776 344566667777554
No 476
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus}
Probab=47.90 E-value=13 Score=22.71 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=33.4
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++..- .+....++.+..+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~s~~~~~vr~~L~~~gi------~~e~~~v~~~~~~~~~~~~P~g~vP~L~~ 56 (206)
T 2on7_A 1 MVHYKLTYFAIRGAGECARQIFALADQ------EFEDVRLDKEQFAKVKPDLPFGQVPVLEV 56 (206)
T ss_dssp CCCEEEEEESSSTTTHHHHHHHHHHTC------CCEEEEECHHHHHHHGGGSSSSCSCEEEE
T ss_pred CCceEEEEcCCCcchHHHHHHHHHcCC------CeeEEEecHHHHHHhCcCCCCCCCCEEEE
Confidence 555677888899999987766654321 34455555432233333334457888763
No 477
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}
Probab=47.00 E-value=29 Score=21.11 Aligned_cols=56 Identities=13% Similarity=-0.001 Sum_probs=34.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeC-CCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDC-TEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~-~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|+-+..++.+.|+.|.+.+-.+++..- .+....++. ...+++.+..-...+|++..
T Consensus 1 M~~~~Ly~~~~s~~~~~vr~~L~~~gi------~~e~~~v~~~~~~~~~~~~~P~g~vP~L~~ 57 (208)
T 1yq1_A 1 MPSYKLTYFFFRGLGEPIRLLFHLAGV------QFEEVRMNPDQTWLDIKDSTPMKQLPVLNI 57 (208)
T ss_dssp CCCEEEEEESSSTTTHHHHHHHHHHTC------CCEEEEECTTTCCHHHHHTSTTSCSCEEEE
T ss_pred CCceEEEEeCCCCchHHHHHHHHHcCC------CeEEEEecccchhhhhhccCCCCCCCEEEE
Confidence 566677888899999887766654321 345556664 33333333334457888863
No 478
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*
Probab=46.69 E-value=48 Score=20.39 Aligned_cols=55 Identities=11% Similarity=0.060 Sum_probs=31.9
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc----ccccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH----GPLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v~~~Pt~~ 61 (116)
|.-+..++.++|+.|.+.+-.+++..- .+....++.... +++.+..-...+|++.
T Consensus 1 M~~~~Ly~~~~s~~~~~v~~~L~~~gi------~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~ 59 (221)
T 2imi_A 1 MSNLVLYTLHLSPPCRAVELTAKALGL------ELEQKTINLLTGDHLKPEFVKLNPQHTIPVLD 59 (221)
T ss_dssp -CCEEEEECTTCHHHHHHHHHHHHHTC------CEEEEECCGGGTGGGSHHHHTTCTTCCSCEEE
T ss_pred CCceEEeeCCCCccHHHHHHHHHHcCC------CceEEEccccccccCCHHHHhhCcCCCCCEEE
Confidence 445677889999999987766654311 345555554322 2222333345788874
No 479
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=46.54 E-value=49 Score=20.68 Aligned_cols=53 Identities=6% Similarity=0.046 Sum_probs=33.0
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-cccccCCccccceEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-PLCKEYDIKGYPTFHH 62 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~ 62 (116)
+..++.++|+.|.+..-.+++..- .+....++....+ .+.+..-...+|++..
T Consensus 24 ~~Ly~~~~sp~~~~v~~~L~~~gi------~ye~~~v~~~~~~~~~~~~~P~g~vP~L~~ 77 (241)
T 3vln_A 24 IRIYSMRFSPFAERTRLVLKAKGI------RHEVININLKNKPEWFFKKNPFGLVPVLEN 77 (241)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC------CEEEEEBCTTSCCTTHHHHCTTCCSCEEEC
T ss_pred EEEEcCCCCcHHHHHHHHHHHcCC------CCeEEecCcccCCHHHHHhCCCCCCCEEEE
Confidence 567888999999998877765321 3555556654332 2334444456887753
No 480
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=45.70 E-value=18 Score=22.23 Aligned_cols=55 Identities=13% Similarity=0.225 Sum_probs=32.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-cccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-PLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~ 61 (116)
|..+-.++++.||.|++.+=.+++.. + .+....+|....+ .+.+..-...+|++.
T Consensus 1 M~Mm~LY~~~~sP~~~rvr~~L~e~g--i----~~e~~~v~~~~~~~~~~~~nP~g~vPvL~ 56 (210)
T 4hoj_A 1 MVMMTLYSGITCPFSHRCRFVLYEKG--M----DFEIKDIDIYNKPEDLAVMNPYNQVPVLV 56 (210)
T ss_dssp ---CEEEECTTCHHHHHHHHHHHHHT--C----CCEEEECCTTSCCHHHHHHCTTCCSCEEE
T ss_pred CceEEEecCCCChHHHHHHHHHHHcC--C----CCEEEEeCCCCCCHHHHHHCCCCCCcEEE
Confidence 55566788999999998775555431 1 3555666654433 333333445688876
No 481
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=44.89 E-value=9.7 Score=26.32 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=28.1
Q ss_pred HHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEEcCc
Q psy3452 20 PEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHHLAL 65 (116)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 65 (116)
..+++..+.++- .+. +..+.+..+++.|++..+|++++++.
T Consensus 133 ~~~~~~~~~~~l--~fp---v~~D~~~~l~~~ygV~~~Pt~~lID~ 173 (352)
T 2hyx_A 133 GNVAKGAANLGI--SYP---IALDNNYATWTNYRNRYWPAEYLIDA 173 (352)
T ss_dssp HHHHHHHHHHTC--CSC---EEECTTSHHHHHTTCCEESEEEEECT
T ss_pred HHHHHHHHHcCC--Ccc---EEeCCcHHHHHHcCCCccCEEEEEeC
Confidence 345555555533 222 34466778899999999999998854
No 482
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=43.17 E-value=33 Score=21.04 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=30.8
Q ss_pred EEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc----ccccccCCccccceEE
Q psy3452 5 ILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH----GPLCKEYDIKGYPTFH 61 (116)
Q Consensus 5 v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v~~~Pt~~ 61 (116)
-.++.+.|+.|.+..-.++...- .+....+|.... +++.+..-...+|++.
T Consensus 2 ~Ly~~~~s~~~~~v~~~L~~~gi------~ye~~~v~~~~~~~~~~~~~~~~P~g~vP~L~ 56 (219)
T 3f6d_A 2 DFYYLPGSAPCRAVQMTAAAVGV------ELNLKLTNLMAGEHMKPEFLKLNPQHCIPTLV 56 (219)
T ss_dssp EEEECTTCHHHHHHHHHHHHHTC------CCEEEECCTTTTGGGSHHHHHHCTTCCSCEEE
T ss_pred EEEeCCCCCchHHHHHHHHHcCC------CceEEEccCcccccCCHHHHhhCCCCccCeEE
Confidence 35789999999987766664321 355566665442 2333333444688775
No 483
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=42.26 E-value=20 Score=22.84 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=25.2
Q ss_pred EcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-cccccccCCccccceEE
Q psy3452 8 YSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 8 ~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~~~~~~~v~~~Pt~~ 61 (116)
..++|+.|.+..-.+++..- .+....++... .+.+.+..-...+|++.
T Consensus 26 ~~~~sp~~~rv~~~L~~~gi------~ye~~~v~~~~~~~~~~~~nP~g~vP~L~ 74 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLKGV------KFNVTTVDMTRKPEELKDLAPGTNPPFLV 74 (247)
T ss_dssp SBCSCHHHHHHHHHHHHHTC------CCEEEEECCC----------CCSSSCEEE
T ss_pred cCCCChhHHHHHHHHHHcCC------CcEEEEcCcccchHHHHHhCCCCCCCEEE
Confidence 68899999998766664321 34455555432 22333333345788776
No 484
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=39.20 E-value=69 Score=19.96 Aligned_cols=52 Identities=10% Similarity=0.139 Sum_probs=32.2
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-cccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-PLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~ 61 (116)
+..++.++|+.|.+.+-.+++. +- .+....++....+ .+.+..-...+|++.
T Consensus 24 ~~Ly~~~~sp~~~~v~~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~nP~g~vP~L~ 76 (239)
T 3q18_A 24 IRIYSMRFCPYSHRTRLVLKAK-----DI-RHEVVNINLRNKPEWYYTKHPFGHIPVLE 76 (239)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TC-CEEEEEBCSSSCCGGGGGTSTTCCSCEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CC-CcEEEecCcccCCHHHHhcCCCCCCCEEE
Confidence 5667889999999987666642 21 3555666655432 233444445688775
No 485
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=38.51 E-value=49 Score=21.41 Aligned_cols=48 Identities=8% Similarity=0.029 Sum_probs=28.8
Q ss_pred EcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-cccccccCCccccceEE
Q psy3452 8 YSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 8 ~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~~~~~~~v~~~Pt~~ 61 (116)
..++|+.|.+..-.+++.. + .+....+|... .+.+.+..-...+|++.
T Consensus 31 ~~~~~p~~~rv~~~L~~~g--i----~ye~~~v~~~~~~~~~~~~nP~gkVPvL~ 79 (267)
T 2ahe_A 31 SIGNCPFSQRLFMILWLKG--V----VFSVTTVDLKRKPADLQNLAPGTHPPFIT 79 (267)
T ss_dssp SBCSCHHHHHHHHHHHHHT--C----CCEEEEECTTSCCHHHHHHSTTCCSCEEE
T ss_pred CCCCCchHHHHHHHHHHcC--C----CCEEEEeCcccChHHHHHhCCCCCCCEEE
Confidence 5789999998776666421 1 35556666543 22333344445789886
No 486
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=38.25 E-value=56 Score=20.59 Aligned_cols=53 Identities=9% Similarity=-0.079 Sum_probs=32.2
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-cccccCCccccceEEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-PLCKEYDIKGYPTFHH 62 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~ 62 (116)
+..++.++|+.|.+.+-.++.. +- .+....++....+ ++.+..-...+|++..
T Consensus 27 ~~Ly~~~~sp~~~~v~~~L~~~-----gi-~ye~~~v~~~~~~~~~~~~nP~g~vP~L~~ 80 (246)
T 3rbt_A 27 LRLYHVDMNPYGHRVLLVLEAK-----RI-KYEVYRLDPLRLPEWFRAKNPRLKIPVLEI 80 (246)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TB-CEEEEECCSSSCCHHHHHHCTTCBSCEEEE
T ss_pred eEEEecCCCccHHHHHHHHHHc-----CC-CceEEEeCcccCCHHHHHhCCCCCCCEEEe
Confidence 4567889999999877666542 11 3555556654432 2444444457887753
No 487
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=38.22 E-value=53 Score=20.39 Aligned_cols=54 Identities=4% Similarity=-0.226 Sum_probs=30.2
Q ss_pred EEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC----cccccccCCccccceEEE
Q psy3452 3 YSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE----HGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 3 v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~ 62 (116)
.+..++.++|+.|.+.+-.++...- .+....++... .+++.+......+|++..
T Consensus 23 m~~Ly~~~~sp~~~~vr~~L~~~gi------~ye~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~ 80 (229)
T 4iel_A 23 MLHILGKIPSINVRKVLWLCTELNL------PFEQEDWGAGFRTTNDPAYLALNPNGLVPVIKD 80 (229)
T ss_dssp CEEEESCTTCHHHHHHHHHHHHHTC------CEEEECCC-------CHHHHTTCTTCCSCEEEE
T ss_pred eEEEecCCCCcchHHHHHHHHHCCC------CcEEEEecCCcCCcCCHHHHhcCCCCCCCEEEE
Confidence 3556778999999998766665322 23444444321 233333334456888864
No 488
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=38.05 E-value=71 Score=19.80 Aligned_cols=52 Identities=15% Similarity=0.284 Sum_probs=31.4
Q ss_pred EEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcc-cccccCCccccceEEE
Q psy3452 5 ILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHG-PLCKEYDIKGYPTFHH 62 (116)
Q Consensus 5 v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~ 62 (116)
=.|+++.||.|++.+-.+.+.. + .+....+|..+.+ ++.+..-.-.+|++..
T Consensus 24 KLy~~~~SP~~~rVr~~L~e~g--i----~~e~~~v~~~~~~~~~~~~nP~gkVPvL~~ 76 (225)
T 4glt_A 24 KLLYSNTSPYARKVRVVAAEKR--I----DVDMVLVVLADPECPVADHNPLGKIPVLIL 76 (225)
T ss_dssp EEEECSSCHHHHHHHHHHHHHT--C----CCEEEECCTTCSSSCGGGTCTTCCSCEEEC
T ss_pred eEecCCCCHHHHHHHHHHHHhC--C----CCEEEEeCCCCCCHHHHHhCCCCCCCEEEe
Confidence 4688999999999876666531 1 3566666655433 2332222346887753
No 489
>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A*
Probab=37.16 E-value=58 Score=19.75 Aligned_cols=55 Identities=11% Similarity=-0.057 Sum_probs=31.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 61 (116)
|+-+..++.+.|+.|.+.+-.+++. +- .+....++.++.+++.+..-...+|++.
T Consensus 3 m~~~~Ly~~~~s~~~~~v~~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~P~g~vP~L~ 57 (211)
T 2wb9_A 3 KQHFKLWYFQFRGRAEPIRLLLTCA-----GV-KFEDYQFTMDQWPTIKPTLPGGRVPLLD 57 (211)
T ss_dssp CCEEEEEEESSCGGGHHHHHHHHHT-----TC-CCEEEEECTTTHHHHGGGSGGGCSCEEE
T ss_pred CCceEEEEeCCCCchHHHHHHHHHc-----CC-CceEEEechhhHHHhCcCCCCCCCCEEE
Confidence 4456677788899998877666542 21 3455556643323333333334678775
No 490
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=36.17 E-value=21 Score=21.56 Aligned_cols=23 Identities=4% Similarity=0.007 Sum_probs=16.1
Q ss_pred CCCCEEEEecCCcc---cCCcCCCCC
Q psy3452 92 KGYPTFQYFHYFNK---QSPSPYHND 114 (116)
Q Consensus 92 ~~~Pt~~~~~~g~~---~~~~~y~g~ 114 (116)
.+-|++.||++|+. ++....+|.
T Consensus 105 PSSPS~ALfKdGelVh~ieRh~IEGr 130 (147)
T 3fhk_A 105 PSSPSMALLKGKEVVHFIPRHEIEGH 130 (147)
T ss_dssp CCSSEEEEEETTEEEEEECGGGTTTS
T ss_pred CCCchheeeeCCEEEEEeehhhcCCC
Confidence 56799999999964 355555553
No 491
>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}
Probab=36.09 E-value=50 Score=20.20 Aligned_cols=55 Identities=15% Similarity=0.089 Sum_probs=32.1
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC----cccccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE----HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~ 61 (116)
|.-+..++.+.|+.|.+..-.+++..- .+....+|... .+++.+..-...+|++.
T Consensus 1 M~~~~Ly~~~~s~~~~~v~~~L~~~gi------~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~ 59 (216)
T 3ay8_A 1 MSSLKLYHFPVSGPSRGALLAARAIGI------PIQIEIVNLFKKEQLQESFLKLNPQHCVPTLD 59 (216)
T ss_dssp -CCCEEEECTTCHHHHHHHHHHHHHTC------CCEEEECCTTCGGGCCHHHHHHSSSCCSSEEE
T ss_pred CCceEEecCCCCccHHHHHHHHHHcCC------CceEEEeccccccccCHHHHhhCCCCCCCeEE
Confidence 444667889999999887766654321 34555566432 12233333344688876
No 492
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=36.07 E-value=38 Score=20.71 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=25.6
Q ss_pred EEEEEEcC--CCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC----cccccccCCccccceEE
Q psy3452 3 YSILFYSP--GCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE----HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 3 v~v~F~a~--wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~ 61 (116)
-+..++.+ +|+.|.+..-.+++..- .+....+|... .+++.+..-...+|++.
T Consensus 6 ~~~Ly~~~~~~s~~~~~v~~~l~~~gi------~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~ 64 (215)
T 3bby_A 6 AITLWSDAHFFSPYVLSAWVALQEKGL------SFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQ 64 (215)
T ss_dssp CEEEEEETTSCCHHHHHHHHHHHHHTC------CCEEEEEC------------------CCCEEE
T ss_pred CEEEEecCCCCCcHHHHHHHHHHHcCC------CCEEEEecCccccccCHHHHhhCCCCCCCEEE
Confidence 45566666 89999987766665321 34555555432 12232222334688876
No 493
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus}
Probab=35.35 E-value=33 Score=21.41 Aligned_cols=56 Identities=18% Similarity=0.059 Sum_probs=32.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (116)
|.-+..++.+.|+.|.+.+-.+++..- .+....++.+..+++.+..-...+|++..
T Consensus 25 m~~~~Ly~~~~s~~~~~vr~~L~~~gi------~ye~~~v~~~~~~~~~~~nP~g~vPvL~~ 80 (225)
T 2hnl_A 25 MEKYTLTYFNGRGRAEVIRLLFALANV------SYEDNRITRDEWKYLKPRTPFGHVPMLNV 80 (225)
T ss_dssp CCCEEEEEESSSGGGHHHHHHHHHHTC------CCEEEEECHHHHHHHGGGSSSSCSCEEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHCCC------CeeEEEeChhhhHHhccCCCCCCCCEEEE
Confidence 334566778889999887755554321 34555555433333334444457888763
No 494
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=34.51 E-value=37 Score=21.23 Aligned_cols=16 Identities=19% Similarity=-0.068 Sum_probs=13.1
Q ss_pred cCCCHHHHhhhHHHHH
Q psy3452 9 SPGCGYCKKAKPEYVK 24 (116)
Q Consensus 9 a~wC~~C~~~~~~~~~ 24 (116)
++|||+|.+.+-.+..
T Consensus 19 ~~~SP~~~kvr~~L~~ 34 (253)
T 4f03_A 19 SPWSPNTWKIRYALNY 34 (253)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCcChhHHHHHHHHHH
Confidence 7899999998866663
No 495
>4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A*
Probab=33.65 E-value=59 Score=20.50 Aligned_cols=55 Identities=9% Similarity=0.021 Sum_probs=29.8
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCc----ccccccCCccccceEEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEH----GPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~v~~~Pt~~~ 62 (116)
|..+..++.+ |+.|.+..-.++...- .+....++.... +++.+..-...+|++..
T Consensus 1 M~m~~Ly~~~-sp~~~~vr~~L~~~gi------~ye~~~v~~~~~~~~~~~~~~~nP~g~vPvL~~ 59 (244)
T 4ecj_A 1 MVMIDLYTAA-TPNGHKVSIALEEMGL------PYRVHALSFDKKEQKAPEFLRINPNGRIPAIVD 59 (244)
T ss_dssp -CCEEEEECS-SHHHHHHHHHHHHHTC------CEEEEECCGGGTGGGSHHHHTTCTTCCSCEEEE
T ss_pred CcEEEEecCC-CcCHHHHHHHHHHcCC------CceEEEecCCCCCcCCHHHHhcCCCCCCCEEEE
Confidence 4445556666 9999988766664311 355555554432 22223333346887754
No 496
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=33.54 E-value=31 Score=21.17 Aligned_cols=52 Identities=10% Similarity=0.170 Sum_probs=30.3
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-cccccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~~~~~~~v~~~Pt~~ 61 (116)
+..++.+.|+.|.+.+-.++...- .+....++... .+++.+......+|++.
T Consensus 9 ~~Ly~~~~s~~~~~v~~~L~~~gi------~~e~~~v~~~~~~~~~~~~~P~g~vP~L~ 61 (215)
T 3lyp_A 9 LACYSDPADHYSHRVRIVLAEKGV------SAEIISVEAGRQPPKLIEVNPYGSLPTLV 61 (215)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTC------CCEEEECC---CCHHHHHHCTTCCSSEEE
T ss_pred eEEEeCCCCchHHHHHHHHHHCCC------CcEEEecCcccccHHHHHHCCCCCcCeEE
Confidence 456889999999988766664322 24444444332 23344444455788876
No 497
>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme, prostaglandin D2 synthase, vaccine candidate; HET: GSH; 1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5 PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A* 2cai_A* 1u3i_A*
Probab=32.59 E-value=52 Score=19.99 Aligned_cols=55 Identities=13% Similarity=0.034 Sum_probs=31.5
Q ss_pred CeEEEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCCcccccccCCccccceEE
Q psy3452 1 MFYSILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTEHGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 1 ~~v~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 61 (116)
|+-+..++.+.|+.|.+.+-.+++. +- .+....++..+.+++....-...+|++.
T Consensus 3 m~~~~Ly~~~~s~~~~~v~~~L~~~-----gi-~~e~~~v~~~~~~~~~~~~P~g~vP~L~ 57 (211)
T 1oe8_A 3 GDHIKVIYFNGRGRAESIRMTLVAA-----GV-NYEDERISFQDWPKIKPTIPGGRLPAVK 57 (211)
T ss_dssp -CEEEEEESCTTSTTHHHHHHHHHT-----TC-CCEEEECCTTTHHHHGGGSTTSCSCEEE
T ss_pred CCceEEEEeCCCChHHHHHHHHHHc-----CC-CceEEEechHhHHHhcccCCCCCCCEEE
Confidence 3456677888899998766555542 21 3455555554444433333445688775
No 498
>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}
Probab=32.37 E-value=25 Score=21.20 Aligned_cols=52 Identities=8% Similarity=-0.048 Sum_probs=31.0
Q ss_pred EEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCC-CcccccccCCccccceEEE
Q psy3452 5 ILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCT-EHGPLCKEYDIKGYPTFHH 62 (116)
Q Consensus 5 v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~-~~~~~~~~~~v~~~Pt~~~ 62 (116)
..++.++|+.|.+.+-.++.. +- .+....++.. ..+++.+..-...+|++..
T Consensus 2 ~Ly~~~~sp~~~~v~~~l~~~-----gi-~~e~~~v~~~~~~~~~~~~~P~g~vP~L~~ 54 (202)
T 3r2q_A 2 KLVGSYTSPFVRKLSILLLEK-----GI-TFEFINELPYNADNGVAQFNPLGKVPVLVT 54 (202)
T ss_dssp EEEECSSCHHHHHHHHHHHHT-----TC-CCEEEECCTTSSSCSCTTTCTTCCSCEEEC
T ss_pred EEEeCCCCcHHHHHHHHHHHc-----CC-CCeEEEecCCCCcHHHHHhCCCCCcCeEEe
Confidence 357899999999877665542 21 3555556543 2333434434456887753
No 499
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=32.22 E-value=29 Score=21.35 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=32.3
Q ss_pred EEEEEcCCCHHHHhhhHHHHHHHHHhccCcceEEEEEeCCC-cccccccCCccccceEE
Q psy3452 4 SILFYSPGCGYCKKAKPEYVKAAEVLKDNHKVALAAIDCTE-HGPLCKEYDIKGYPTFH 61 (116)
Q Consensus 4 ~v~F~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~~~~~~~v~~~Pt~~ 61 (116)
+..++.++|+.|.+.+-.++...- .+....+|... .+++.+..-...+|++.
T Consensus 7 ~~Ly~~~~sp~~~~v~~~L~~~gi------~~e~~~v~~~~~~~~~~~~~P~g~vP~L~ 59 (216)
T 3lyk_A 7 MTLFSNKDDIYCHQVKIVLAEKGV------LYENAEVDLQALPEDLMELNPYGTVPTLV 59 (216)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC------CCEEEECCTTSCCHHHHHHCTTCCSCEEE
T ss_pred EEEEeCCCChhHHHHHHHHHHcCC------CcEEEeCCcccCcHHHHhhCCCCCcCeEE
Confidence 567889999999998766654311 35555666543 23333444445788876
No 500
>3dmo_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=31.00 E-value=22 Score=21.24 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=11.5
Q ss_pred cCCCHHHHhhhHHHH
Q psy3452 9 SPGCGYCKKAKPEYV 23 (116)
Q Consensus 9 a~wC~~C~~~~~~~~ 23 (116)
.+-|+.|++.+.++.
T Consensus 93 ~~PCG~CRQ~l~Ef~ 107 (138)
T 3dmo_A 93 IAPCGACRQVMIELG 107 (138)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhC
Confidence 367999999877664
Done!