Your job contains 1 sequence.
>psy3459
MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK
RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG
TILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSAL
GFDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGEDILFAMSALGFD
SYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDKGEKSVNCEVYQEISVEDVFQ
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3459
(296 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|H7C5X4 - symbol:Nfyb "Nuclear transcription fac... 446 4.0e-42 1
MGI|MGI:97317 - symbol:Nfyb "nuclear transcription factor... 442 1.1e-41 1
RGD|3172 - symbol:Nfyb "nuclear transcription factor-Y be... 442 1.1e-41 1
UNIPROTKB|F1M6L1 - symbol:Nfyb "Nuclear transcription fac... 442 1.1e-41 1
UNIPROTKB|E2RDU1 - symbol:NFYB "Uncharacterized protein" ... 442 1.1e-41 1
UNIPROTKB|E1C5G6 - symbol:NFYB "Nuclear transcription fac... 442 1.1e-41 1
UNIPROTKB|P25207 - symbol:NFYB "Nuclear transcription fac... 442 1.1e-41 1
UNIPROTKB|Q32KW0 - symbol:NFYB "Nuclear transcription fac... 442 1.1e-41 1
UNIPROTKB|P25208 - symbol:NFYB "Nuclear transcription fac... 442 1.1e-41 1
UNIPROTKB|F1SG36 - symbol:NFYB "Uncharacterized protein" ... 442 1.1e-41 1
ZFIN|ZDB-GENE-050306-25 - symbol:nfybb "nuclear transcrip... 442 1.1e-41 1
ZFIN|ZDB-GENE-050417-13 - symbol:nfyba "nuclear transcrip... 437 3.6e-41 1
TAIR|locus:2129885 - symbol:NF-YB3 ""nuclear factor Y, su... 386 9.2e-36 1
TAIR|locus:2061789 - symbol:NF-YB8 ""nuclear factor Y, su... 373 2.2e-34 1
DICTYBASE|DDB_G0279419 - symbol:nfyB "putative histone-li... 372 2.8e-34 1
FB|FBgn0032816 - symbol:Nf-YB "Nuclear factor Y-box B" sp... 372 2.8e-34 1
TAIR|locus:2168983 - symbol:NF-YB2 ""nuclear factor Y, su... 371 3.6e-34 1
TAIR|locus:2054095 - symbol:NF-YB7 ""nuclear factor Y, su... 369 5.8e-34 1
TAIR|locus:2083941 - symbol:NF-YB10 ""nuclear factor Y, s... 367 9.5e-34 1
CGD|CAL0000086 - symbol:HAP31 species:5476 "Candida albic... 367 9.5e-34 1
UNIPROTKB|Q5A6N7 - symbol:HAP31 "Potential histone-like t... 367 9.5e-34 1
UNIPROTKB|F8VSL3 - symbol:NFYB "Nuclear transcription fac... 354 2.3e-32 1
TAIR|locus:2169028 - symbol:NF-YB6 ""nuclear factor Y, su... 349 7.7e-32 1
SGD|S000000117 - symbol:HAP3 "Subunit of the Hap2p/3p/4p/... 347 1.3e-31 1
TAIR|locus:2043293 - symbol:NF-YB5 ""nuclear factor Y, su... 328 1.3e-29 1
WB|WBGene00021132 - symbol:nfyb-1 species:6239 "Caenorhab... 318 1.5e-28 1
TAIR|locus:2201163 - symbol:LEC1 "LEAFY COTYLEDON 1" spec... 316 2.4e-28 1
POMBASE|SPAC23C11.08 - symbol:php3 "CCAAT-binding factor ... 311 8.2e-28 1
GENEDB_PFALCIPARUM|PF11_0477 - symbol:PF11_0477 "CCAAT-bo... 308 4.5e-26 1
TAIR|locus:2036064 - symbol:NF-YB4 ""nuclear factor Y, su... 291 1.1e-25 1
UNIPROTKB|F1SN88 - symbol:POLE3 "Uncharacterized protein"... 189 8.1e-15 1
RGD|1359475 - symbol:Pole3 "polymerase (DNA directed), ep... 185 2.5e-14 1
UNIPROTKB|J9P0Z6 - symbol:POLE3 "Uncharacterized protein"... 185 2.5e-14 1
UNIPROTKB|Q3SZN5 - symbol:POLE3 "DNA polymerase epsilon s... 185 2.5e-14 1
UNIPROTKB|Q9NRF9 - symbol:POLE3 "DNA polymerase epsilon s... 185 2.5e-14 1
UNIPROTKB|Q5R4W3 - symbol:POLE3 "DNA polymerase epsilon s... 185 2.5e-14 1
MGI|MGI:1933378 - symbol:Pole3 "polymerase (DNA directed)... 182 5.6e-14 1
ZFIN|ZDB-GENE-040426-1773 - symbol:pole3 "polymerase (DNA... 182 5.6e-14 1
TAIR|locus:2181529 - symbol:NF-YB12 ""nuclear factor Y, s... 182 5.6e-14 1
UNIPROTKB|E2RR45 - symbol:DR1 "Uncharacterized protein" s... 180 9.7e-14 1
UNIPROTKB|F1P2L0 - symbol:POLE3 "Uncharacterized protein"... 179 1.3e-13 1
TAIR|locus:2178307 - symbol:NF-YB13 ""nuclear factor Y, s... 178 1.6e-13 1
UNIPROTKB|F1S534 - symbol:DR1 "Uncharacterized protein" s... 177 2.2e-13 1
FB|FBgn0028926 - symbol:NC2beta "Negative Cofactor 2beta"... 177 2.2e-13 1
UNIPROTKB|Q5ZMV3 - symbol:DR1 "Protein Dr1" species:9031 ... 176 2.8e-13 1
UNIPROTKB|Q2KJ19 - symbol:DR1 "Down-regulator of transcri... 176 2.8e-13 1
UNIPROTKB|Q01658 - symbol:DR1 "Protein Dr1" species:9606 ... 176 2.8e-13 1
RGD|1305201 - symbol:Dr1 "down-regulator of transcription... 176 2.8e-13 1
MGI|MGI:1100515 - symbol:Dr1 "down-regulator of transcrip... 175 3.7e-13 1
ZFIN|ZDB-GENE-061013-797 - symbol:dr1 "down-regulator of ... 173 6.3e-13 1
FB|FBgn0043002 - symbol:Chrac-14 "Chromatin accessibility... 173 6.3e-13 1
DICTYBASE|DDB_G0269638 - symbol:dr1 "putative histone-lik... 171 1.1e-12 1
CGD|CAL0002303 - symbol:NCB2 species:5476 "Candida albica... 171 1.1e-12 1
UNIPROTKB|Q5A0I6 - symbol:NCB2 "Putative uncharacterized ... 171 1.1e-12 1
UNIPROTKB|G5EHZ6 - symbol:MGCH7_ch7g579 "Negative cofacto... 159 2.5e-11 1
ASPGD|ASPL0000055867 - symbol:AN9358 species:162425 "Emer... 158 3.2e-11 1
POMBASE|SPBC30D10.02 - symbol:SPBC30D10.02 "transcription... 154 9.2e-11 1
UNIPROTKB|Q8W0W9 - symbol:Dr1 "Repressor protein" species... 168 1.6e-10 1
DICTYBASE|DDB_G0272222 - symbol:ybl1 "YB-like 1" species:... 113 3.3e-06 1
SGD|S000002805 - symbol:NCB2 "Subunit of a heterodimeric ... 112 4.3e-06 1
TAIR|locus:2038648 - symbol:NF-YB11 ""nuclear factor Y, s... 130 4.3e-06 1
WB|WBGene00001092 - symbol:dro-1 species:6239 "Caenorhabd... 117 3.0e-05 1
POMBASE|SPBC3D6.09 - symbol:dpb4 "DNA polymerase epsilon ... 116 8.1e-05 1
>UNIPROTKB|H7C5X4 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
ProteinModelPortal:H7C5X4 Ensembl:ENSRNOT00000014122 Uniprot:H7C5X4
Length = 205
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 94/144 (65%), Positives = 111/144 (77%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEV-----YQEISVEDVFQS 118
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK + V E E+ F +
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEAFTN 170
Query: 119 ---SGTIL---EQQNGQNETIAKD 136
+G I +QQN ++ ++ D
Sbjct: 171 QLPAGLITADGQQQNVMHDVLSTD 194
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 77/122 (63%), Positives = 88/122 (72%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 41 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 96
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFISFITSEA 213
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I S A
Sbjct: 97 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVS-A 155
Query: 214 SD 215
+D
Sbjct: 156 TD 157
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 90 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
>MGI|MGI:97317 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0016602 "CCAAT-binding factor
complex" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] Reactome:REACT_112621
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
MGI:MGI:97317 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864
KO:K08065 OMA:KENFREQ EMBL:X55316 EMBL:AK010762 EMBL:AK146168
EMBL:BC010719 IPI:IPI00753226 PIR:F38245 RefSeq:NP_035044.1
UniGene:Mm.245998 ProteinModelPortal:P63139 SMR:P63139
STRING:P63139 PhosphoSite:P63139 PRIDE:P63139 DNASU:18045
Ensembl:ENSMUST00000130911 GeneID:18045 KEGG:mmu:18045
UCSC:uc007gjv.1 InParanoid:P63139 NextBio:293161 Bgee:P63139
CleanEx:MM_NFYB Genevestigator:P63139 GermOnline:ENSMUSG00000020248
Uniprot:P63139
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 77/122 (63%), Positives = 88/122 (72%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFISFITSEA 213
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I S A
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVS-A 157
Query: 214 SD 215
+D
Sbjct: 158 TD 159
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>RGD|3172 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA;ISO] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OrthoDB:EOG4D52ZM EMBL:M55045 EMBL:BC089791 IPI:IPI00208278
PIR:A23692 RefSeq:NP_113741.1 UniGene:Rn.90077
ProteinModelPortal:P63140 SMR:P63140 DIP:DIP-2660N STRING:P63140
Ensembl:ENSRNOT00000066143 GeneID:25336 KEGG:rno:25336 UCSC:RGD:3172
InParanoid:P63140 NextBio:606231 ArrayExpress:P63140
Genevestigator:P63140 GermOnline:ENSRNOG00000010309 Uniprot:P63140
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 77/122 (63%), Positives = 88/122 (72%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFISFITSEA 213
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I S A
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVS-A 157
Query: 214 SD 215
+D
Sbjct: 158 TD 159
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>UNIPROTKB|F1M6L1 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
IPI:IPI00949385 Ensembl:ENSRNOT00000067075 ArrayExpress:F1M6L1
Uniprot:F1M6L1
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 77/122 (63%), Positives = 88/122 (72%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFISFITSEA 213
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I S A
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVS-A 157
Query: 214 SD 215
+D
Sbjct: 158 TD 159
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>UNIPROTKB|E2RDU1 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070491 "repressing transcription factor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 KO:K08065 OMA:KENFREQ
EMBL:AAEX03009996 RefSeq:XP_003432091.1 Ensembl:ENSCAFT00000050062
GeneID:475450 KEGG:cfa:475450 NextBio:20851292 Uniprot:E2RDU1
Length = 205
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 77/122 (63%), Positives = 88/122 (72%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 41 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 96
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFISFITSEA 213
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I T A
Sbjct: 97 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGG-TVTA 155
Query: 214 SD 215
+D
Sbjct: 156 TD 157
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 90 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
>UNIPROTKB|E1C5G6 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 GeneTree:ENSGT00550000074689 GO:GO:0016602
PANTHER:PTHR11064:SF9 EMBL:AADN02006311 EMBL:AADN02006310
IPI:IPI00596965 Ensembl:ENSGALT00000037650 ArrayExpress:E1C5G6
Uniprot:E1C5G6
Length = 152
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 74/113 (65%), Positives = 84/113 (74%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 41 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 96
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFI 206
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I
Sbjct: 97 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 90 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
>UNIPROTKB|P25207 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:AJ719889 EMBL:X59713
IPI:IPI00820911 PIR:S24469 RefSeq:NP_990600.1 UniGene:Gga.1264
ProteinModelPortal:P25207 SMR:P25207 STRING:P25207
Ensembl:ENSGALT00000020762 Ensembl:ENSGALT00000037651 GeneID:396205
KEGG:gga:396205 InParanoid:P25207 NextBio:20816257
ArrayExpress:P25207 Uniprot:P25207
Length = 205
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 74/113 (65%), Positives = 84/113 (74%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 41 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 96
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFI 206
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I
Sbjct: 97 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 90 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 149
>UNIPROTKB|Q32KW0 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9913 "Bos taurus" [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
EMBL:BC109900 IPI:IPI01002647 RefSeq:NP_001073254.1
UniGene:Bt.63176 ProteinModelPortal:Q32KW0 SMR:Q32KW0 STRING:Q32KW0
Ensembl:ENSBTAT00000043454 GeneID:614382 KEGG:bta:614382 CTD:4801
HOVERGEN:HBG008864 InParanoid:Q32KW0 KO:K08065 OMA:KENFREQ
OrthoDB:EOG4D52ZM NextBio:20899084 ArrayExpress:Q32KW0
Uniprot:Q32KW0
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 74/113 (65%), Positives = 84/113 (74%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFI 206
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>UNIPROTKB|P25208 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0016602 "CCAAT-binding
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:L06145 EMBL:X59710 EMBL:AK291934
EMBL:BC005316 EMBL:BC005317 EMBL:BC007035 IPI:IPI00013217
PIR:S22817 RefSeq:NP_006157.1 UniGene:Hs.84928 PDB:1N1J PDBsum:1N1J
ProteinModelPortal:P25208 SMR:P25208 IntAct:P25208 MINT:MINT-146867
STRING:P25208 PhosphoSite:P25208 DMDM:399193 PaxDb:P25208
PRIDE:P25208 DNASU:4801 Ensembl:ENST00000240055
Ensembl:ENST00000551727 GeneID:4801 KEGG:hsa:4801 UCSC:uc001tkl.1
GeneCards:GC12M104510 HGNC:HGNC:7805 HPA:CAB004211 MIM:189904
neXtProt:NX_P25208 PharmGKB:PA31610 InParanoid:P25208
PhylomeDB:P25208 ChiTaRS:NFYB EvolutionaryTrace:P25208
GenomeRNAi:4801 NextBio:18506 ArrayExpress:P25208 Bgee:P25208
CleanEx:HS_NFYB Genevestigator:P25208 GermOnline:ENSG00000120837
Uniprot:P25208
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 74/113 (65%), Positives = 84/113 (74%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFI 206
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>UNIPROTKB|F1SG36 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
CTD:4801 KO:K08065 OMA:KENFREQ EMBL:CU457468 RefSeq:NP_001138402.1
UniGene:Ssc.54110 Ensembl:ENSSSCT00000000919 GeneID:100157587
KEGG:ssc:100157587 ArrayExpress:F1SG36 Uniprot:F1SG36
Length = 207
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/99 (84%), Positives = 93/99 (93%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
INGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 74/113 (65%), Positives = 84/113 (74%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 43 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 98
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKFI 206
SEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK I
Sbjct: 99 SEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 51/60 (85%), Positives = 56/60 (93%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSYVEPLK+YLQK+REA KGEK +
Sbjct: 92 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGI 151
>ZFIN|ZDB-GENE-050306-25 [details] [associations]
symbol:nfybb "nuclear transcription factor Y, beta
b" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050306-25
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:BX323444 EMBL:BC090693
IPI:IPI00512171 RefSeq:NP_001013340.1 UniGene:Dr.151645 SMR:Q5CZV3
STRING:Q5CZV3 Ensembl:ENSDART00000067072 GeneID:503744
KEGG:dre:503744 CTD:503744 InParanoid:Q5CZV3 NextBio:20866288
Uniprot:Q5CZV3
Length = 205
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 84/101 (83%), Positives = 94/101 (93%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
LREQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRK
Sbjct: 51 LREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRK 110
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 103
TINGEDILFAMS LGFD YVEPLK+YLQK+REA KGEK ++
Sbjct: 111 TINGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEKGIS 151
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 69/89 (77%), Positives = 76/89 (85%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I++ Q IAKDA+ECVQECVSEFISFITSEAS+RCH EKRKTINGEDILFAMS LG
Sbjct: 66 IMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLG 125
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFIT 210
FD YVEPLK+YLQK+REA KGEK IS +T
Sbjct: 126 FDMYVEPLKLYLQKFREAMKGEKGISTVT 154
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 50/61 (81%), Positives = 56/61 (91%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFD YVEPLK+YLQK+REA KGEK +
Sbjct: 91 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEKGI 150
Query: 264 N 264
+
Sbjct: 151 S 151
>ZFIN|ZDB-GENE-050417-13 [details] [associations]
symbol:nfyba "nuclear transcription factor Y, beta
a" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050417-13
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:FP236856 EMBL:BC092926
IPI:IPI00490399 RefSeq:NP_001017565.1 UniGene:Dr.31402 SMR:Q561X4
Ensembl:ENSDART00000057254 GeneID:550227 KEGG:dre:550227 CTD:550227
InParanoid:Q561X4 OMA:IPQTGKX NextBio:20879490 Uniprot:Q561X4
Length = 204
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 86/118 (72%), Positives = 98/118 (83%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK A+P++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 51 REQDIYLPIANVARIMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGT 121
INGEDILFAMS LGFD YVEPLK+YLQK+REA KGEK + E ED+ + T
Sbjct: 111 INGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEKGITPVAVGEGLGEDLTDETFT 168
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 67/86 (77%), Positives = 74/86 (86%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I++ Q IAKDA+ECVQECVSEFISFITSEAS+RCH EKRKTINGEDILFAMS LG
Sbjct: 65 IMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLG 124
Query: 182 FDSYVEPLKIYLQKYREATKGEKFIS 207
FD YVEPLK+YLQK+REA KGEK I+
Sbjct: 125 FDMYVEPLKLYLQKFREAMKGEKGIT 150
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFD YVEPLK+YLQK+REA KGEK +
Sbjct: 90 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEKGI 149
>TAIR|locus:2129885 [details] [associations]
symbol:NF-YB3 ""nuclear factor Y, subunit B3""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:Z97336 EMBL:AL161539
eggNOG:COG2036 OMA:NDSGGHK HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AK117818 EMBL:BT003684 IPI:IPI00516812
PIR:G71407 RefSeq:NP_193190.1 UniGene:At.33269
ProteinModelPortal:O23310 SMR:O23310 IntAct:O23310 STRING:O23310
PaxDb:O23310 PRIDE:O23310 EnsemblPlants:AT4G14540.1 GeneID:827101
KEGG:ath:AT4G14540 GeneFarm:5133 TAIR:At4g14540 InParanoid:O23310
PhylomeDB:O23310 ProtClustDB:CLSN2685335 Genevestigator:O23310
GermOnline:AT4G14540 Uniprot:O23310
Length = 161
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 73/98 (74%), Positives = 88/98 (89%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQDRFLPIANV++IMKKA+P + KI+KDA+E VQECVSEFISFIT EASD+C EKRKT
Sbjct: 20 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 101
ING+D+L+AM+ LGF+ YVEPLK+YLQKYRE +GEK+
Sbjct: 80 INGDDLLWAMTTLGFEDYVEPLKVYLQKYREV-EGEKT 116
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 56/83 (67%), Positives = 69/83 (83%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ N I+KDA+E VQECVSEFISFIT EASD+C EKRKTING+D+L+AM+ LG
Sbjct: 34 IMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG 93
Query: 182 FDSYVEPLKIYLQKYREATKGEK 204
F+ YVEPLK+YLQKYRE +GEK
Sbjct: 94 FEDYVEPLKVYLQKYREV-EGEK 115
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 42/59 (71%), Positives = 52/59 (88%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 262
+FISFIT EASD+C EKRKTING+D+L+AM+ LGF+ YVEPLK+YLQKYRE +GEK+
Sbjct: 59 EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREV-EGEKT 116
>TAIR|locus:2061789 [details] [associations]
symbol:NF-YB8 ""nuclear factor Y, subunit B8""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 EMBL:AC006260
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AY070477
EMBL:AY091673 IPI:IPI00541270 PIR:A84788 RefSeq:NP_001031500.1
RefSeq:NP_850277.2 RefSeq:NP_973617.1 UniGene:At.28391
ProteinModelPortal:Q8VYK4 SMR:Q8VYK4 EnsemblPlants:AT2G37060.1
EnsemblPlants:AT2G37060.2 EnsemblPlants:AT2G37060.3 GeneID:818282
KEGG:ath:AT2G37060 GeneFarm:5138 TAIR:At2g37060 InParanoid:Q8VYK4
OMA:GCGSHES PhylomeDB:Q8VYK4 ProtClustDB:CLSN2681248
Genevestigator:Q8VYK4 GermOnline:AT2G37060 Uniprot:Q8VYK4
Length = 173
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 69/99 (69%), Positives = 87/99 (87%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
+REQDRFLPIAN+++IMK+ +P +GKIAKDA+E VQECVSEFISF+TSEASD+C EKRK
Sbjct: 28 VREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRK 87
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREA---TKG 98
TING+D+L+AM+ LGF+ Y+EPLK+YL +YRE TKG
Sbjct: 88 TINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKG 126
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N IAKDA+E VQECVSEFISF+TSEASD+C EKRKTING+D+L+AM+ LGF+ Y+EPL
Sbjct: 51 NGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPL 110
Query: 190 KIYLQKYREA---TKG 202
K+YL +YRE TKG
Sbjct: 111 KVYLMRYREMEGDTKG 126
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/59 (66%), Positives = 50/59 (84%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREA---TKG 259
+FISF+TSEASD+C EKRKTING+D+L+AM+ LGF+ Y+EPLK+YL +YRE TKG
Sbjct: 68 EFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKG 126
>DICTYBASE|DDB_G0279419 [details] [associations]
symbol:nfyB "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 dictyBase:DDB_G0279419 GenomeReviews:CM000152_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006366 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AAFI02000031 eggNOG:COG2036 GO:GO:0016602
RefSeq:XP_641617.1 HSSP:P25208 ProteinModelPortal:Q54WV0 SMR:Q54WV0
EnsemblProtists:DDB0220099 GeneID:8622023 KEGG:ddi:DDB_G0279419
InParanoid:Q54WV0 OMA:SLHNSGN ProtClustDB:CLSZ2846666
Uniprot:Q54WV0
Length = 490
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 69/98 (70%), Positives = 84/98 (85%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQDR+LPIAN+ +IMKKA+P + K+AKDA+E VQ+CVSEFISFITSEASD+C EKRKT
Sbjct: 47 REQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKT 106
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 101
INGEDI+ AM +LGF++YVEPLK+YL KYRE K +
Sbjct: 107 INGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNN 144
Score = 281 (104.0 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 54/80 (67%), Positives = 66/80 (82%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ N +AKDA+E VQ+CVSEFISFITSEASD+C EKRKTINGEDI+ AM +LG
Sbjct: 61 IMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTINGEDIIAAMVSLG 120
Query: 182 FDSYVEPLKIYLQKYREATK 201
F++YVEPLK+YL KYRE K
Sbjct: 121 FENYVEPLKVYLLKYRETEK 140
Score = 216 (81.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 262
+FISFITSEASD+C EKRKTINGEDI+ AM +LGF++YVEPLK+YL KYRE K +
Sbjct: 86 EFISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNN 144
>FB|FBgn0032816 [details] [associations]
symbol:Nf-YB "Nuclear factor Y-box B" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
PANTHER:PTHR11064:SF9 HSSP:P25208 EMBL:AY070968 EMBL:AY094930
RefSeq:NP_609997.1 UniGene:Dm.6186 SMR:Q8ST61 IntAct:Q8ST61
MINT:MINT-940508 STRING:Q8ST61 EnsemblMetazoa:FBtr0081289
GeneID:35261 KEGG:dme:Dmel_CG10447 UCSC:CG10447-RA CTD:35261
FlyBase:FBgn0032816 InParanoid:Q8ST61 OMA:LPICNII OrthoDB:EOG4RFJ8X
GenomeRNAi:35261 NextBio:792674 Uniprot:Q8ST61
Length = 156
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 69/100 (69%), Positives = 85/100 (85%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
LREQDRFLPI N+ KIMK +P++GKIAKDAREC+QECVSEFISFI+SEA +R E RK
Sbjct: 36 LREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRK 95
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 102
T+NG+D+L A S LGFD+YVEPL IYLQKYRE+ K ++++
Sbjct: 96 TVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNL 135
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 53/76 (69%), Positives = 63/76 (82%)
Query: 129 QNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEP 188
QN IAKDAREC+QECVSEFISFI+SEA +R E RKT+NG+D+L A S LGFD+YVEP
Sbjct: 58 QNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEP 117
Query: 189 LKIYLQKYREATKGEK 204
L IYLQKYRE+ K ++
Sbjct: 118 LSIYLQKYRESNKSDR 133
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISFI+SEA +R E RKT+NG+D+L A S LGFD+YVEPL IYLQKYRE+ K ++++
Sbjct: 76 EFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNL 135
>TAIR|locus:2168983 [details] [associations]
symbol:NF-YB2 ""nuclear factor Y, subunit B2""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AB025628 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AF385744
EMBL:AY078026 EMBL:Y13724 EMBL:AF250338 IPI:IPI00519534
RefSeq:NP_199575.1 UniGene:At.21494 UniGene:At.71142
ProteinModelPortal:Q9FGJ3 SMR:Q9FGJ3 STRING:Q9FGJ3 PaxDb:Q9FGJ3
PRIDE:Q9FGJ3 EnsemblPlants:AT5G47640.1 GeneID:834815
KEGG:ath:AT5G47640 GeneFarm:5132 TAIR:At5g47640 InParanoid:Q9FGJ3
OMA:YLQRFRE PhylomeDB:Q9FGJ3 ProtClustDB:CLSN2914913
Genevestigator:Q9FGJ3 GermOnline:AT5G47640 Uniprot:Q9FGJ3
Length = 190
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 68/98 (69%), Positives = 88/98 (89%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQDRFLPIANV++IMKKA+P + KI+KDA+E +QECVSEFISF+T EASD+C EKRKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 101
ING+D+L+AM+ LGF+ YVEPLK+YLQ++RE +GE++
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREI-EGERT 122
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 51/83 (61%), Positives = 69/83 (83%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ N I+KDA+E +QECVSEFISF+T EASD+C EKRKTING+D+L+AM+ LG
Sbjct: 40 IMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLG 99
Query: 182 FDSYVEPLKIYLQKYREATKGEK 204
F+ YVEPLK+YLQ++RE +GE+
Sbjct: 100 FEDYVEPLKVYLQRFREI-EGER 121
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 38/59 (64%), Positives = 52/59 (88%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 262
+FISF+T EASD+C EKRKTING+D+L+AM+ LGF+ YVEPLK+YLQ++RE +GE++
Sbjct: 65 EFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREI-EGERT 122
>TAIR|locus:2054095 [details] [associations]
symbol:NF-YB7 ""nuclear factor Y, subunit B7""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AC007063 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 PANTHER:PTHR11064:SF9 EMBL:DQ446491
EMBL:BT025276 IPI:IPI00548512 PIR:F84508 RefSeq:NP_178981.1
UniGene:At.64924 ProteinModelPortal:Q9SIT9 SMR:Q9SIT9 IntAct:Q9SIT9
EnsemblPlants:AT2G13570.1 GeneID:815843 KEGG:ath:AT2G13570
GeneFarm:5137 TAIR:At2g13570 InParanoid:Q9SIT9 OMA:NKEQDRF
PhylomeDB:Q9SIT9 ProtClustDB:CLSN2913036 ArrayExpress:Q9SIT9
Genevestigator:Q9SIT9 Uniprot:Q9SIT9
Length = 215
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 81/148 (54%), Positives = 104/148 (70%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
+EQDRFLPIANV +IMKK +P +GKI+KDA+E VQECVSEFISF+T EASD+C EKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
ING+DI++A++ LGF+ YV PLK+YL KYR+ T+GEK VN Q+ + Q +
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRD-TEGEK-VNSPKQQQQRQQQ--QQ----I 146
Query: 124 EQQNGQNETIAK-DARECVQECVSEFIS 150
+QQN N + D C S +IS
Sbjct: 147 QQQNHHNYQFQEQDQNNNNMSCTS-YIS 173
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 53/85 (62%), Positives = 69/85 (81%)
Query: 120 GTILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSA 179
G I+++ N I+KDA+E VQECVSEFISF+T EASD+C EKRKTING+DI++A++
Sbjct: 47 GRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITT 106
Query: 180 LGFDSYVEPLKIYLQKYREATKGEK 204
LGF+ YV PLK+YL KYR+ T+GEK
Sbjct: 107 LGFEDYVAPLKVYLCKYRD-TEGEK 130
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISF+T EASD+C EKRKTING+DI++A++ LGF+ YV PLK+YL KYR+ T+GEK V
Sbjct: 74 EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRD-TEGEK-V 131
Query: 264 NCEVYQEISVEDKGEKSVNCEVYQ 287
N Q+ + + + N YQ
Sbjct: 132 NSPKQQQQRQQQQQIQQQNHHNYQ 155
>TAIR|locus:2083941 [details] [associations]
symbol:NF-YB10 ""nuclear factor Y, subunit B10""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL132966 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 ProtClustDB:CLSN2681248
EMBL:AK176827 IPI:IPI00539611 PIR:T45874 RefSeq:NP_190902.2
UniGene:At.35203 ProteinModelPortal:Q67XJ2 SMR:Q67XJ2 IntAct:Q67XJ2
PaxDb:Q67XJ2 PRIDE:Q67XJ2 EnsemblPlants:AT3G53340.1 GeneID:824502
KEGG:ath:AT3G53340 GeneFarm:5140 TAIR:At3g53340 InParanoid:Q67XJ2
OMA:QKYREVR PhylomeDB:Q67XJ2 Genevestigator:Q67XJ2
GermOnline:AT3G53340 Uniprot:Q67XJ2
Length = 176
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 67/99 (67%), Positives = 87/99 (87%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
+REQDRFLPIAN+++IMK+ +P +GKIAKDA+E +QECVSEFISF+TSEASD+C EKRK
Sbjct: 27 VREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRK 86
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREA---TKG 98
TING+D+L+AM+ LGF+ Y++PLK+YL +YRE TKG
Sbjct: 87 TINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKG 125
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 51/76 (67%), Positives = 64/76 (84%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N IAKDA+E +QECVSEFISF+TSEASD+C EKRKTING+D+L+AM+ LGF+ Y++PL
Sbjct: 50 NGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPL 109
Query: 190 KIYLQKYREA---TKG 202
K+YL +YRE TKG
Sbjct: 110 KVYLMRYREMEGDTKG 125
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 188 PLKIYLQKYREATKGE---KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVE 244
PL + K + T E +FISF+TSEASD+C EKRKTING+D+L+AM+ LGF+ Y++
Sbjct: 48 PLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYID 107
Query: 245 PLKIYLQKYREA---TKG 259
PLK+YL +YRE TKG
Sbjct: 108 PLKVYLMRYREMEGDTKG 125
>CGD|CAL0000086 [details] [associations]
symbol:HAP31 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA]
[GO:0043457 "regulation of cellular respiration" evidence=IEA]
[GO:0000436 "carbon catabolite activation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/95 (73%), Positives = 83/95 (87%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
LREQDR+LPIANVA+IMK +P + K++KDA+EC+QECVSEFISFITSEASD+C EKRK
Sbjct: 11 LREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKEKRK 70
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 97
TINGEDIL++M LGF++Y E LKIYL KYREA K
Sbjct: 71 TINGEDILYSMYDLGFENYAEVLKIYLAKYREARK 105
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/69 (75%), Positives = 61/69 (88%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
++KDA+EC+QECVSEFISFITSEASD+C EKRKTINGEDIL++M LGF++Y E LKIY
Sbjct: 37 VSKDAKECMQECVSEFISFITSEASDKCLKEKRKTINGEDILYSMYDLGFENYAEVLKIY 96
Query: 193 LQKYREATK 201
L KYREA K
Sbjct: 97 LAKYREARK 105
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 258
+FISFITSEASD+C EKRKTINGEDIL++M LGF++Y E LKIYL KYREA K
Sbjct: 51 EFISFITSEASDKCLKEKRKTINGEDILYSMYDLGFENYAEVLKIYLAKYREARK 105
>UNIPROTKB|Q5A6N7 [details] [associations]
symbol:HAP31 "Potential histone-like transcription factor"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/95 (73%), Positives = 83/95 (87%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
LREQDR+LPIANVA+IMK +P + K++KDA+EC+QECVSEFISFITSEASD+C EKRK
Sbjct: 11 LREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKEKRK 70
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 97
TINGEDIL++M LGF++Y E LKIYL KYREA K
Sbjct: 71 TINGEDILYSMYDLGFENYAEVLKIYLAKYREARK 105
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 52/69 (75%), Positives = 61/69 (88%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
++KDA+EC+QECVSEFISFITSEASD+C EKRKTINGEDIL++M LGF++Y E LKIY
Sbjct: 37 VSKDAKECMQECVSEFISFITSEASDKCLKEKRKTINGEDILYSMYDLGFENYAEVLKIY 96
Query: 193 LQKYREATK 201
L KYREA K
Sbjct: 97 LAKYREARK 105
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 258
+FISFITSEASD+C EKRKTINGEDIL++M LGF++Y E LKIYL KYREA K
Sbjct: 51 EFISFITSEASDKCLKEKRKTINGEDILYSMYDLGFENYAEVLKIYLAKYREARK 105
>UNIPROTKB|F8VSL3 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
HGNC:HGNC:7805 ChiTaRS:NFYB EMBL:AC089983 IPI:IPI01021893
ProteinModelPortal:F8VSL3 SMR:F8VSL3 Ensembl:ENST00000551446
ArrayExpress:F8VSL3 Bgee:F8VSL3 Uniprot:F8VSL3
Length = 131
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 68/78 (87%), Positives = 74/78 (94%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD +LPIANVA+IMK AIP++GKIAKDA+ECVQECVSEFISFITSEAS+RCH EKRKT
Sbjct: 54 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 113
Query: 64 INGEDILFAMSALGFDSY 81
INGEDILFAMS LGFDSY
Sbjct: 114 INGEDILFAMSTLGFDSY 131
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 57/92 (61%), Positives = 65/92 (70%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
E T G K E ++E + + I++ Q IAKDA+ECVQECVSEFISFIT
Sbjct: 44 EDTNGSK----ESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFIT 99
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSY 185
SEAS+RCH EKRKTINGEDILFAMS LGFDSY
Sbjct: 100 SEASERCHQEKRKTINGEDILFAMSTLGFDSY 131
Score = 181 (68.8 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 35/39 (89%), Positives = 37/39 (94%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSY 242
+FISFITSEAS+RCH EKRKTINGEDILFAMS LGFDSY
Sbjct: 93 EFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSY 131
>TAIR|locus:2169028 [details] [associations]
symbol:NF-YB6 ""nuclear factor Y, subunit B6""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AB025628 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AY138461 EMBL:BT004183 IPI:IPI00522576
IPI:IPI00655434 RefSeq:NP_001078727.1 RefSeq:NP_199578.2
UniGene:At.29883 UniGene:At.49140 ProteinModelPortal:Q84W66
SMR:Q84W66 IntAct:Q84W66 STRING:Q84W66 EnsemblPlants:AT5G47670.1
GeneID:834818 KEGG:ath:AT5G47670 GeneFarm:5136 TAIR:At5g47670
InParanoid:Q84W66 OMA:TEYGAYG PhylomeDB:Q84W66
ProtClustDB:CLSN2680471 Genevestigator:Q84W66 GermOnline:AT5G47670
Uniprot:Q84W66
Length = 234
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 66/126 (52%), Positives = 94/126 (74%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
+REQDRF+PIANV +IM++ +P KI+ D++E +QECVSE+ISFIT EA++RC E+RK
Sbjct: 56 VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRK 115
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTI 122
TI ED+L+AMS LGFD Y+EPL +YL +YRE +GE+ V+C S V ++G +
Sbjct: 116 TITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL-EGERGVSC------SAGSVSMTNGLV 168
Query: 123 LEQQNG 128
+++ NG
Sbjct: 169 VKRPNG 174
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
I+ D++E +QECVSE+ISFIT EA++RC E+RKTI ED+L+AMS LGFD Y+EPL +Y
Sbjct: 82 ISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLY 141
Query: 193 LQKYREATKGEKFIS 207
L +YRE +GE+ +S
Sbjct: 142 LHRYREL-EGERGVS 155
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
++ISFIT EA++RC E+RKTI ED+L+AMS LGFD Y+EPL +YL +YRE +GE+ V
Sbjct: 96 EYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL-EGERGV 154
Query: 264 NC 265
+C
Sbjct: 155 SC 156
>SGD|S000000117 [details] [associations]
symbol:HAP3 "Subunit of the Hap2p/3p/4p/5p CCAAT-binding
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016602
"CCAAT-binding factor complex" evidence=IDA;IPI] [GO:0000436
"carbon catabolite activation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043457 "regulation of cellular respiration"
evidence=IMP] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
SGD:S000000117 GO:GO:0043565 GO:GO:0006351 EMBL:BK006936
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0043457
GeneTree:ENSGT00550000074689 GO:GO:0000436 GO:GO:0016602
HOGENOM:HOG000211832 OrthoDB:EOG4N33Z8 PANTHER:PTHR11064:SF9
EMBL:M20318 EMBL:X74544 EMBL:Z35782 EMBL:AY558459 PIR:A28123
RefSeq:NP_009532.1 ProteinModelPortal:P13434 SMR:P13434
DIP:DIP-1362N IntAct:P13434 MINT:MINT-567883 STRING:P13434
PaxDb:P13434 EnsemblFungi:YBL021C GeneID:852260 KEGG:sce:YBL021C
CYGD:YBL021c OMA:NYIEPLK NextBio:970850 Genevestigator:P13434
GermOnline:YBL021C Uniprot:P13434
Length = 144
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 64/92 (69%), Positives = 79/92 (85%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
LREQDR+LPI NVA++MK +P S K++KDA+EC+QECVSE ISF+TSEASDRC +KRK
Sbjct: 35 LREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRK 94
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYRE 94
TINGEDIL ++ ALGF++Y E LKIYL KYR+
Sbjct: 95 TINGEDILISLHALGFENYAEVLKIYLAKYRQ 126
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 47/66 (71%), Positives = 58/66 (87%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
++KDA+EC+QECVSE ISF+TSEASDRC +KRKTINGEDIL ++ ALGF++Y E LKIY
Sbjct: 61 VSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIY 120
Query: 193 LQKYRE 198
L KYR+
Sbjct: 121 LAKYRQ 126
Score = 191 (72.3 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE 255
+ ISF+TSEASDRC +KRKTINGEDIL ++ ALGF++Y E LKIYL KYR+
Sbjct: 75 ELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQ 126
>TAIR|locus:2043293 [details] [associations]
symbol:NF-YB5 ""nuclear factor Y, subunit B5""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AC005309 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:BT003968
EMBL:BT005081 IPI:IPI00540695 PIR:G84919 RefSeq:NP_182302.1
UniGene:At.36317 ProteinModelPortal:O82248 SMR:O82248 IntAct:O82248
STRING:O82248 PRIDE:O82248 EnsemblPlants:AT2G47810.1 GeneID:819393
KEGG:ath:AT2G47810 GeneFarm:5135 TAIR:At2g47810 InParanoid:O82248
OMA:ICWAMAN PhylomeDB:O82248 ProtClustDB:CLSN2913222
Genevestigator:O82248 GermOnline:AT2G47810 Uniprot:O82248
Length = 160
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 61/100 (61%), Positives = 79/100 (79%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M ++EQDR LPIANV +IMK +P + K++K+A+E +QECVSEFISF+T EASD+CH EK
Sbjct: 47 MMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEK 106
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEK 100
RKT+NG+DI +AM+ LGFD Y LK YL +YR +GEK
Sbjct: 107 RKTVNGDDICWAMANLGFDDYAAQLKKYLHRYR-VLEGEK 145
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/85 (56%), Positives = 63/85 (74%)
Query: 120 GTILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSA 179
G I++ N ++K+A+E +QECVSEFISF+T EASD+CH EKRKT+NG+DI +AM+
Sbjct: 62 GRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMAN 121
Query: 180 LGFDSYVEPLKIYLQKYREATKGEK 204
LGFD Y LK YL +YR +GEK
Sbjct: 122 LGFDDYAAQLKKYLHRYR-VLEGEK 145
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/103 (42%), Positives = 62/103 (60%)
Query: 163 EKRKTINGEDILFAMSALG-FDSYVEPLKIYLQKYREATKGE---KFISFITSEASDRCH 218
E+ + +D L ++ +G + P + K + T E +FISF+T EASD+CH
Sbjct: 44 EESMMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCH 103
Query: 219 LEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEK 261
EKRKT+NG+DI +AM+ LGFD Y LK YL +YR +GEK
Sbjct: 104 KEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYR-VLEGEK 145
>WB|WBGene00021132 [details] [associations]
symbol:nfyb-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 PANTHER:PTHR11064:SF9 HSSP:P25208
EMBL:FO080661 PIR:E88021 RefSeq:NP_493740.1
ProteinModelPortal:O17286 SMR:O17286 DIP:DIP-25261N IntAct:O17286
MINT:MINT-1048257 STRING:O17286 PaxDb:O17286 EnsemblMetazoa:W10D9.4
GeneID:173435 KEGG:cel:CELE_W10D9.4 UCSC:W10D9.4 CTD:173435
WormBase:W10D9.4 InParanoid:O17286 NextBio:879647 Uniprot:O17286
Length = 403
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/95 (62%), Positives = 76/95 (80%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
L +Q+RFLPIANV +IMK + K+AKDA+EC QECVSEFISFI SEA++ C++ KRK
Sbjct: 59 LLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRK 118
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 97
TI +D+L AM A GFD+Y EP++I+LQKYR+A K
Sbjct: 119 TITADDLLTAMEATGFDNYAEPMRIFLQKYRQAHK 153
Score = 254 (94.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 47/80 (58%), Positives = 62/80 (77%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I++ Q +AKDA+EC QECVSEFISFI SEA++ C++ KRKTI +D+L AM A G
Sbjct: 74 IMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTITADDLLTAMEATG 133
Query: 182 FDSYVEPLKIYLQKYREATK 201
FD+Y EP++I+LQKYR+A K
Sbjct: 134 FDNYAEPMRIFLQKYRQAHK 153
>TAIR|locus:2201163 [details] [associations]
symbol:LEC1 "LEAFY COTYLEDON 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010262 "somatic
embryogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009785 "blue light signaling pathway"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA;IDA;IMP]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0010262 GO:GO:0045723 eggNOG:COG2036 GO:GO:0009785
EMBL:AC013482 HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9
EMBL:AB493474 EMBL:BX817269 EMBL:AF036684 IPI:IPI00542473
PIR:G86352 RefSeq:NP_173616.2 UniGene:At.28011
ProteinModelPortal:Q9SFD8 SMR:Q9SFD8 IntAct:Q9SFD8 STRING:Q9SFD8
PaxDb:Q9SFD8 PRIDE:Q9SFD8 EnsemblPlants:AT1G21970.1 GeneID:838800
KEGG:ath:AT1G21970 GeneFarm:5139 TAIR:At1g21970 InParanoid:Q9SFD8
OMA:INGMPAF Genevestigator:Q9SFD8 GermOnline:AT1G21970
Uniprot:Q9SFD8
Length = 238
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 55/91 (60%), Positives = 76/91 (83%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
REQD+++PIANV +IM+K +P KI+ DA+E +QECVSE+ISF+T EA++RC E+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYRE 94
I EDIL+AMS LGFD+YV+PL +++ +YRE
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYRE 148
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 41/66 (62%), Positives = 56/66 (84%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
I+ DA+E +QECVSE+ISF+T EA++RC E+RKTI EDIL+AMS LGFD+YV+PL ++
Sbjct: 83 ISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVF 142
Query: 193 LQKYRE 198
+ +YRE
Sbjct: 143 INRYRE 148
Score = 180 (68.4 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 31/52 (59%), Positives = 44/52 (84%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE 255
++ISF+T EA++RC E+RKTI EDIL+AMS LGFD+YV+PL +++ +YRE
Sbjct: 97 EYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYRE 148
>POMBASE|SPAC23C11.08 [details] [associations]
symbol:php3 "CCAAT-binding factor complex subunit Php3"
species:4896 "Schizosaccharomyces pombe" [GO:0000785 "chromatin"
evidence=NAS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO;TAS] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0016602 "CCAAT-binding
factor complex" evidence=ISO] [GO:0031670 "cellular response to
nutrient" evidence=IC] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:1900402 "regulation of carbohydrate
metabolic process by regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 PomBase:SPAC23C11.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000785 GO:GO:0000978
GO:GO:0001077 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0031670
eggNOG:COG2036 GO:GO:0016602 EMBL:X75072 PIR:S42744
RefSeq:NP_593639.1 ProteinModelPortal:P36611 SMR:P36611
STRING:P36611 EnsemblFungi:SPAC23C11.08.1 GeneID:2542027
KEGG:spo:SPAC23C11.08 HOGENOM:HOG000211832 OMA:XDEDEER
OrthoDB:EOG4N33Z8 NextBio:20803105 GO:GO:1900402
PANTHER:PTHR11064:SF9 Uniprot:P36611
Length = 116
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/104 (59%), Positives = 79/104 (75%)
Query: 10 LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDI 69
LPIANVA+IMK A+PE+ KI+K+A++CVQ+CVSEFISF+T EAS++C EKRKTI GED+
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71
Query: 70 LFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVE 113
L A++ LGF++Y E LKI L KYRE S+ E Q S E
Sbjct: 72 LLALNTLGFENYAEVLKISLTKYREQQARSASMK-ETKQSRSEE 114
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 45/77 (58%), Positives = 61/77 (79%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I++ +N I+K+A++CVQ+CVSEFISF+T EAS++C EKRKTI GED+L A++ LG
Sbjct: 20 IMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDVLLALNTLG 79
Query: 182 FDSYVEPLKIYLQKYRE 198
F++Y E LKI L KYRE
Sbjct: 80 FENYAEVLKISLTKYRE 96
Score = 177 (67.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 38/71 (53%), Positives = 48/71 (67%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FISF+T EAS++C EKRKTI GED+L A++ LGF++Y E LKI L KYRE S+
Sbjct: 45 EFISFVTGEASEQCTQEKRKTITGEDVLLALNTLGFENYAEVLKISLTKYREQQARSASM 104
Query: 264 NCEVYQEISVE 274
E Q S E
Sbjct: 105 K-ETKQSRSEE 114
>GENEDB_PFALCIPARUM|PF11_0477 [details] [associations]
symbol:PF11_0477 "CCAAT-box DNA binding protein
subunit B" species:5833 "Plasmodium falciparum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AE014186 HSSP:P25208
RefSeq:XP_001348144.1 ProteinModelPortal:Q8IHQ2 SMR:Q8IHQ2
IntAct:Q8IHQ2 MINT:MINT-1610835 EnsemblProtists:PF11_0477:mRNA
GeneID:811020 KEGG:pfa:PF11_0477 EuPathDB:PlasmoDB:PF3D7_1146600
OMA:TNETNQT Uniprot:Q8IHQ2
Length = 1301
Score = 308 (113.5 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 60/136 (44%), Positives = 94/136 (69%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ + LPIAN+++IMK+ +P S K+AK++++ ++ECV+EFI F+TSEASDRC EKRKTI
Sbjct: 1129 DSETLLPIANISRIMKRILPGSAKVAKESKDIIRECVTEFIQFLTSEASDRCTREKRKTI 1188
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDV--FQSSGTI 122
NGEDIL++M LGF+ Y+EPL YL K+++ + S N Y E +++ + SG +
Sbjct: 1189 NGEDILYSMEKLGFNDYIEPLTEYLNKWKQLKELNNSNN---YHEKKFDNIKKTEESGDL 1245
Query: 123 LEQQNG-QNETIAKDA 137
N +N+ + ++A
Sbjct: 1246 NNNNNSVENKNLDENA 1261
Score = 233 (87.1 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 46/105 (43%), Positives = 72/105 (68%)
Query: 94 EATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQNETIAKDARECVQECVSEFISFIT 153
++T +K C+ + + ++ + IL G + +AK++++ ++ECV+EFI F+T
Sbjct: 1118 DSTDKKKGSKCDSETLLPIANISRIMKRILP---GSAK-VAKESKDIIRECVTEFIQFLT 1173
Query: 154 SEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE 198
SEASDRC EKRKTINGEDIL++M LGF+ Y+EPL YL K+++
Sbjct: 1174 SEASDRCTREKRKTINGEDILYSMEKLGFNDYIEPLTEYLNKWKQ 1218
Score = 189 (71.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSV 263
+FI F+TSEASDRC EKRKTINGEDIL++M LGF+ Y+EPL YL K+++ + S
Sbjct: 1167 EFIQFLTSEASDRCTREKRKTINGEDILYSMEKLGFNDYIEPLTEYLNKWKQLKELNNSN 1226
Query: 264 NC--EVYQEIS-VEDKGEKSVN 282
N + + I E+ G+ + N
Sbjct: 1227 NYHEKKFDNIKKTEESGDLNNN 1248
Score = 38 (18.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/95 (17%), Positives = 38/95 (40%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+ + +N+ + + + +C S F + I + +++ +NG IL A +
Sbjct: 311 IVNFDSNKNKPLDEYNHSNIGDCTSVFKNEINGNYNLEQNMDSINNVNGVAILDAED-MN 369
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDR 216
+ + I LQ Y F + + +D+
Sbjct: 370 ISKDYDNMNI-LQNYNMMNNDISFEKNLGEKMNDK 403
>TAIR|locus:2036064 [details] [associations]
symbol:NF-YB4 ""nuclear factor Y, subunit B4""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC000106 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:BT029363 IPI:IPI00522503 PIR:C86222
RefSeq:NP_172377.1 UniGene:At.64828 ProteinModelPortal:O04027
SMR:O04027 IntAct:O04027 EnsemblPlants:AT1G09030.1 GeneID:837424
KEGG:ath:AT1G09030 GeneFarm:5134 TAIR:At1g09030 InParanoid:O04027
OMA:RERTEHN PhylomeDB:O04027 ProtClustDB:CLSN2912861
ArrayExpress:O04027 Genevestigator:O04027 GermOnline:AT1G09030
Uniprot:O04027
Length = 139
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 50/95 (52%), Positives = 75/95 (78%)
Query: 3 LREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRK 62
+ ++DR LPIANV ++MK+ +P + KI+K+A++ VQEC +EFISF+T EAS++CH E RK
Sbjct: 1 MTDEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRK 60
Query: 63 TINGEDILFAMSALGFDSYVEPLKIYLQKYREATK 97
T+NG+DI +A+S LG D+Y + + +L KYREA +
Sbjct: 61 TVNGDDIWWALSTLGLDNYADAVGRHLHKYREAER 95
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/82 (50%), Positives = 61/82 (74%)
Query: 120 GTILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSA 179
G +++Q N I+K+A++ VQEC +EFISF+T EAS++CH E RKT+NG+DI +A+S
Sbjct: 14 GRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALST 73
Query: 180 LGFDSYVEPLKIYLQKYREATK 201
LG D+Y + + +L KYREA +
Sbjct: 74 LGLDNYADAVGRHLHKYREAER 95
Score = 174 (66.3 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 38/92 (41%), Positives = 57/92 (61%)
Query: 171 EDILFAMSALG-FDSYVEPLKIYLQKYREATKGE---KFISFITSEASDRCHLEKRKTIN 226
ED L ++ +G + P + K + T E +FISF+T EAS++CH E RKT+N
Sbjct: 4 EDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVN 63
Query: 227 GEDILFAMSALGFDSYVEPLKIYLQKYREATK 258
G+DI +A+S LG D+Y + + +L KYREA +
Sbjct: 64 GDDIWWALSTLGLDNYADAVGRHLHKYREAER 95
>UNIPROTKB|F1SN88 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 KO:K02326 GeneTree:ENSGT00550000074689 OMA:NDSGGHK
EMBL:FP102008 RefSeq:XP_003122132.1 UniGene:Ssc.2548
Ensembl:ENSSSCT00000006024 GeneID:100517450 KEGG:ssc:100517450
Uniprot:F1SN88
Length = 147
Score = 189 (71.6 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 44/145 (30%), Positives = 77/145 (53%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+PE I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + + ++ + +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQD 120
Query: 121 TILEQQNGQNETIAKDARECVQECV 145
++ N ++E ++ + +E V
Sbjct: 121 KSRDEDNDEDEERLEEEEQNEEEDV 145
Score = 146 (56.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ + I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F +V PLK L+ YR KG+K EAS++ +K K + E+
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKK-------EASEQKKKDKDKKTDSEE 118
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKS 280
E +DK +K+
Sbjct: 104 -----EQKKKDKDKKT 114
>RGD|1359475 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 RGD:1359475
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OMA:NDSGGHK OrthoDB:EOG4TB4CS EMBL:BC081988
EMBL:BC083800 IPI:IPI00208715 RefSeq:NP_001007653.1
RefSeq:XP_002726991.1 RefSeq:XP_002729875.1 UniGene:Rn.3290
ProteinModelPortal:Q642A5 STRING:Q642A5 PRIDE:Q642A5
Ensembl:ENSRNOT00000006416 Ensembl:ENSRNOT00000020722
GeneID:100362333 GeneID:298098 KEGG:rno:100362333 KEGG:rno:298098
UCSC:RGD:1359475 InParanoid:Q642A5 NextBio:643156
Genevestigator:Q642A5 GermOnline:ENSRNOG00000004843
GermOnline:ENSRNOG00000015392 Uniprot:Q642A5
Length = 145
Score = 185 (70.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 43/143 (30%), Positives = 78/143 (54%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + + ++ +D +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKDCEEQDK 120
Query: 121 TILEQQNGQNETIAKDARECVQE 143
+ E+++ E + ++ + +E
Sbjct: 121 S-REEEDEDEERLDEEEQNEEEE 142
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKR-KTINGED 229
F +V PLK L+ YR KG+K S + D+ E++ K+ ED
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKDCEEQDKSREEED 126
Score = 118 (46.6 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKSVNCEVYQEISVED 293
E +DK +K +CE Q+ S E+
Sbjct: 104 -----EQKKKDKDKK--DCEE-QDKSREE 124
>UNIPROTKB|J9P0Z6 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 OMA:TALAHKQ EMBL:AAEX03008085
RefSeq:XP_855374.2 Ensembl:ENSCAFT00000047307 GeneID:612550
KEGG:cfa:612550 Uniprot:J9P0Z6
Length = 147
Score = 185 (70.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 47/143 (32%), Positives = 75/143 (52%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + E +D + +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS-----EQKKKDKDKKTD 115
Query: 121 TILEQQNGQNETIAKDARECVQE 143
EQ G++E +D +E
Sbjct: 116 AE-EQDKGRDEDNDEDEERLEEE 137
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F +V PLK L+ YR KG+K EAS++ +K K + E+
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKK-------EASEQKKKDKDKKTDAEE 118
Score = 115 (45.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQE------ISVEDKGEKSVNCEVYQEISVED 293
+ ++ +DKG N E + + E+
Sbjct: 104 EQKKKDKDKKTDAEEQDKGRDEDNDEDEERLEEEE 138
>UNIPROTKB|Q3SZN5 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
EMBL:BT030577 EMBL:BC102772 IPI:IPI00716318 RefSeq:NP_001029562.1
UniGene:Bt.27905 HSSP:Q9V444 ProteinModelPortal:Q3SZN5 SMR:Q3SZN5
STRING:Q3SZN5 PRIDE:Q3SZN5 Ensembl:ENSBTAT00000000316 GeneID:510678
KEGG:bta:510678 CTD:54107 GeneTree:ENSGT00550000074689
HOGENOM:HOG000007701 HOVERGEN:HBG060262 InParanoid:Q3SZN5
OMA:NDSGGHK OrthoDB:EOG4TB4CS NextBio:20869563 Uniprot:Q3SZN5
Length = 147
Score = 185 (70.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + + ++ + +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQD 120
Query: 121 TILEQQNGQNETIAKDARECVQE 143
++ N ++E ++ + +E
Sbjct: 121 KSRDEDNDEDEERLEEEEQNEEE 143
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F +V PLK L+ YR KG+K EAS++ +K K + E+
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKK-------EASEQKKKDKDKKTDSEE 118
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKS 280
E +DK +K+
Sbjct: 104 -----EQKKKDKDKKT 114
>UNIPROTKB|Q9NRF9 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IDA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0006260 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 EMBL:AL137066
eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
HOGENOM:HOG000007701 HOVERGEN:HBG060262 OMA:NDSGGHK
OrthoDB:EOG4TB4CS EMBL:AF226077 EMBL:AF261689 EMBL:AY720898
EMBL:AK074629 EMBL:AK074762 EMBL:AK074782 EMBL:DQ072116
EMBL:BC003166 EMBL:BC004170 IPI:IPI00010141 RefSeq:NP_059139.3
UniGene:Hs.108112 ProteinModelPortal:Q9NRF9 SMR:Q9NRF9
IntAct:Q9NRF9 MINT:MINT-1439872 STRING:Q9NRF9 PhosphoSite:Q9NRF9
DMDM:22653710 PaxDb:Q9NRF9 PeptideAtlas:Q9NRF9 PRIDE:Q9NRF9
Ensembl:ENST00000374169 Ensembl:ENST00000374171 GeneID:54107
KEGG:hsa:54107 UCSC:uc004bhn.2 GeneCards:GC09M116169
HGNC:HGNC:13546 HPA:HPA047945 MIM:607267 neXtProt:NX_Q9NRF9
PharmGKB:PA33499 InParanoid:Q9NRF9 PhylomeDB:Q9NRF9 ChiTaRS:POLE3
GenomeRNAi:54107 NextBio:56470 Bgee:Q9NRF9 CleanEx:HS_POLE3
Genevestigator:Q9NRF9 GermOnline:ENSG00000148229 Uniprot:Q9NRF9
Length = 147
Score = 185 (70.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + + ++ + +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQD 120
Query: 121 TILEQQNGQNETIAKDARECVQE 143
++ N ++E ++ + +E
Sbjct: 121 KSRDEDNDEDEERLEEEEQNEEE 143
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F +V PLK L+ YR KG+K EAS++ +K K + E+
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKK-------EASEQKKKDKDKKTDSEE 118
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKS 280
E +DK +K+
Sbjct: 104 -----EQKKKDKDKKT 114
>UNIPROTKB|Q5R4W3 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9601 "Pongo abelii" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOVERGEN:HBG060262
OMA:NDSGGHK EMBL:CR861128 RefSeq:NP_001126884.1 UniGene:Pab.18535
ProteinModelPortal:Q5R4W3 SMR:Q5R4W3 PRIDE:Q5R4W3
Ensembl:ENSPPYT00000022775 GeneID:100173898 KEGG:pon:100173898
InParanoid:Q5R4W3 Uniprot:Q5R4W3
Length = 147
Score = 185 (70.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
RKT+N D+L AM + F +V PLK L+ YR KG+K + + ++ + +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQD 120
Query: 121 TILEQQNGQNETIAKDARECVQE 143
++ N ++E ++ + +E
Sbjct: 121 KSRDEDNDEDEERLEEEEQNEEE 143
Score = 144 (55.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F +V PLK L+ YR KG+K EAS++ +K K + E+
Sbjct: 78 FQRFVTPLKEALEAYRREQKGKK-------EASEQKKKDKDKKTDSEE 118
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F +V PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKS 280
E +DK +K+
Sbjct: 104 -----EQKKKDKDKKT 114
>MGI|MGI:1933378 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3 (p17
subunit)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=ISO] [GO:0008622 "epsilon DNA polymerase complex"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1933378
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS EMBL:AF230806 EMBL:BC024996
IPI:IPI00123264 RefSeq:NP_067473.2 UniGene:Mm.27444
ProteinModelPortal:Q9JKP7 SMR:Q9JKP7 STRING:Q9JKP7
PhosphoSite:Q9JKP7 PaxDb:Q9JKP7 PRIDE:Q9JKP7
Ensembl:ENSMUST00000030091 GeneID:59001 KEGG:mmu:59001
UCSC:uc008tfb.1 InParanoid:Q9JKP7 NextBio:314514 Bgee:Q9JKP7
Genevestigator:Q9JKP7 GermOnline:ENSMUSG00000028394 Uniprot:Q9JKP7
Length = 145
Score = 182 (69.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 103
RKT+N D+L AM + F ++ PLK L+ YR KG+K +
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGKKEAS 103
Score = 140 (54.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLE---KRKTINGED 229
F ++ PLK L+ YR KG+K S + D+ E K + + ED
Sbjct: 78 FQRFITPLKEALEAYRRDEKGKKEASEQKKKDKDKKDSEEQDKSREVEEED 128
Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F ++ PLK L+ YR KG+K +
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGKKEAS 103
Query: 265 CEVYQEISVEDKGEKSVNCEVYQE 288
+ ++ +D E+ + EV +E
Sbjct: 104 EQKKKDKDKKDSEEQDKSREVEEE 127
>ZFIN|ZDB-GENE-040426-1773 [details] [associations]
symbol:pole3 "polymerase (DNA directed), epsilon 3
(p17 subunit)" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
ZFIN:ZDB-GENE-040426-1773 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS OMA:TALAHKQ EMBL:CR925757
EMBL:CR855262 EMBL:BC059666 IPI:IPI00500787 RefSeq:NP_957095.1
UniGene:Dr.76881 STRING:Q6PBL4 Ensembl:ENSDART00000007512
GeneID:393774 KEGG:dre:393774 InParanoid:Q6PBL4 NextBio:20814771
Uniprot:Q6PBL4
Length = 148
Score = 182 (69.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 35/103 (33%), Positives = 63/103 (61%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+PE ++K+AR + + S F+ + TS A+ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPEGVNVSKEARRAISQAASVFVLYATSCANSFAMKAK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 103
RKT+N D++ AM + F+ +++PL+ L+ Y++ KG+K +
Sbjct: 61 RKTLNAGDVMSAMEEMEFERFLQPLREALEAYKKGQKGKKEAS 103
Score = 145 (56.1 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 33/108 (30%), Positives = 61/108 (56%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ + ++K+AR + + S F+ + TS A+ KRKT+N D++ AM +
Sbjct: 18 IIKEALPEGVNVSKEARRAISQAASVFVLYATSCANSFAMKAKRKTLNAGDVMSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F+ +++PL+ L+ Y++ KG+K EAS++ +K K NG D
Sbjct: 78 FERFLQPLREALEAYKKGQKGKK-------EASEQKRKDKEKK-NGTD 117
Score = 107 (42.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A+ KRKT+N D++ AM + F+ +++PL+ L+ Y++ KG+K +
Sbjct: 44 FVLYATSCANSFAMKAKRKTLNAGDVMSAMEEMEFERFLQPLREALEAYKKGQKGKKEAS 103
>TAIR|locus:2181529 [details] [associations]
symbol:NF-YB12 ""nuclear factor Y, subunit B12""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
HOGENOM:HOG000178641 ProtClustDB:CLSN2719282 PANTHER:PTHR11064:SF8
HSSP:Q01658 EMBL:AF428400 EMBL:AY087017 EMBL:AY125544 EMBL:AK227164
IPI:IPI00535830 RefSeq:NP_568190.1 UniGene:At.23541
ProteinModelPortal:Q944I5 PRIDE:Q944I5 EnsemblPlants:AT5G08190.1
GeneID:830715 KEGG:ath:AT5G08190 TAIR:At5g08190 InParanoid:Q944I5
OMA:EVCNKED PhylomeDB:Q944I5 Genevestigator:Q944I5 Uniprot:Q944I5
Length = 163
Score = 182 (69.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 40/112 (35%), Positives = 68/112 (60%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
++D LP A + KI+K+ +P ++A+DA++ + EC EFI+ I+SE+++ C+ E ++TI
Sbjct: 11 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTI 70
Query: 65 NGEDILFAMSALGFDSYVEPL-KIYLQ-KYREATKGEKSVNCEVYQEISVED 114
E +L A+ LGF YVE + Y Q KY ++SV E++ E+
Sbjct: 71 APEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQRSVKMNSGAEMTEEE 122
Score = 131 (51.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ + +A+DA++ + EC EFI+ I+SE+++ C+ E ++TI E +L A+ LG
Sbjct: 24 IIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIAPEHVLKALQVLG 83
Query: 182 FDSYVEPLKIYLQKYREAT 200
F YVE + ++++ T
Sbjct: 84 FGEYVEEVYAAYEQHKYET 102
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL-KIYLQ-KYREATKGEK 261
+FI+ I+SE+++ C+ E ++TI E +L A+ LGF YVE + Y Q KY ++
Sbjct: 49 EFINLISSESNEVCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQR 108
Query: 262 SVNCEVYQEISVED 275
SV E++ E+
Sbjct: 109 SVKMNSGAEMTEEE 122
>UNIPROTKB|E2RR45 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003712 "transcription
cofactor activity" evidence=IEA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 PANTHER:PTHR11064:SF8
CTD:1810 GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AAEX03004819
RefSeq:XP_537068.1 ProteinModelPortal:E2RR45
Ensembl:ENSCAFT00000032065 GeneID:479943 KEGG:cfa:479943
NextBio:20855049 Uniprot:E2RR45
Length = 176
Score = 180 (68.4 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 45/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + ++ T+ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQLAAATASASNQ 163
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>UNIPROTKB|F1P2L0 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
KO:K02326 CTD:54107 GeneTree:ENSGT00550000074689 OMA:TALAHKQ
EMBL:AADN02026940 IPI:IPI00819486 RefSeq:NP_001020525.2
UniGene:Gga.5487 Ensembl:ENSGALT00000040353 GeneID:417275
KEGG:gga:417275 NextBio:20820605 Uniprot:F1P2L0
Length = 143
Score = 179 (68.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 1 MPLREQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
M R +D LP A + +I+K+A+P+ I+K+AR + S F+ + TS A++ K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEK 100
RKT+N D+L AM + F ++ PLK L+ YR KG+K
Sbjct: 61 RKTLNAGDVLSAMEEMEFQRFIAPLKESLEVYRREQKGKK 100
Score = 136 (52.9 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ I+K+AR + S F+ + TS A++ KRKT+N D+L AM +
Sbjct: 18 IIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNAGDVLSAMEEME 77
Query: 182 FDSYVEPLKIYLQKYREATKGEKFISFITSEASDRCHLEKRKTINGED 229
F ++ PLK L+ YR KG+K + +D +K + + +D
Sbjct: 78 FQRFIAPLKESLEVYRREQKGKKEARKDKDKKADSEEQDKSREDDNDD 125
Score = 111 (44.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVN 264
F+ + TS A++ KRKT+N D+L AM + F ++ PLK L+ YR KG+K
Sbjct: 44 FVLYATSCANNFAMKGKRKTLNAGDVLSAMEEMEFQRFIAPLKESLEVYRREQKGKKEAR 103
Query: 265 CEVYQEISVEDKGEKS 280
+ ++ E++ +KS
Sbjct: 104 KDKDKKADSEEQ-DKS 118
>TAIR|locus:2178307 [details] [associations]
symbol:NF-YB13 ""nuclear factor Y, subunit B13""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 EMBL:AB006708 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:D38110 EMBL:AY057709
EMBL:AY116960 IPI:IPI00529408 PIR:S53582 RefSeq:NP_851060.1
RefSeq:NP_851061.1 UniGene:At.270 ProteinModelPortal:P49592
SMR:P49592 STRING:P49592 PaxDb:P49592 PRIDE:P49592
EnsemblPlants:AT5G23090.1 EnsemblPlants:AT5G23090.2 GeneID:832373
KEGG:ath:AT5G23090 TAIR:At5g23090 eggNOG:COG5150
HOGENOM:HOG000178641 InParanoid:P49592 OMA:NDVCNKE PhylomeDB:P49592
ProtClustDB:CLSN2719282 Genevestigator:P49592 PANTHER:PTHR11064:SF8
Uniprot:P49592
Length = 159
Score = 178 (67.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/112 (33%), Positives = 68/112 (60%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
++D LP A + KI+K+ +P ++A+DA++ + EC EFI+ ++SE++D C+ E ++TI
Sbjct: 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTI 70
Query: 65 NGEDILFAMSALGFDSYVEPL-KIYLQ-KYREATKGEKSVNCEVYQEISVED 114
E +L A+ LGF Y+E + Y Q KY ++SV +++ E+
Sbjct: 71 APEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEE 122
Score = 133 (51.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
I+++ + +A+DA++ + EC EFI+ ++SE++D C+ E ++TI E +L A+ LG
Sbjct: 24 IIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLG 83
Query: 182 FDSYVEPLKIYLQKYREAT 200
F Y+E + ++++ T
Sbjct: 84 FGEYIEEVYAAYEQHKYET 102
Score = 103 (41.3 bits), Expect = 0.00080, P = 0.00080
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL-KIYLQ-KYREATKGEK 261
+FI+ ++SE++D C+ E ++TI E +L A+ LGF Y+E + Y Q KY ++
Sbjct: 49 EFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQR 108
Query: 262 SVNCEVYQEISVED 275
SV +++ E+
Sbjct: 109 SVKWNPGAQMTEEE 122
>UNIPROTKB|F1S534 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010
OMA:NKKTINA EMBL:CU469025 RefSeq:XP_001928514.1 UniGene:Ssc.5433
Ensembl:ENSSSCT00000025408 GeneID:100152776 KEGG:ssc:100152776
Uniprot:F1S534
Length = 176
Score = 177 (67.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI ++SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + I+ ++ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQIAAASASASNQ 163
Score = 149 (57.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI ++SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 106 (42.4 bits), Expect = 0.00063, P = 0.00063
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI ++SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLVSSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>FB|FBgn0028926 [details] [associations]
symbol:NC2beta "Negative Cofactor 2beta" species:7227
"Drosophila melanogaster" [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=NAS] [GO:0017054 "negative cofactor 2 complex"
evidence=NAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001075 "RNA
polymerase II core promoter sequence-specific DNA binding
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0045944
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0042766 GO:GO:0051123 eggNOG:COG5150 PANTHER:PTHR11064:SF8
GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AF302257
EMBL:AY060717 EMBL:DQ138728 RefSeq:NP_609736.1 UniGene:Dm.3397
ProteinModelPortal:Q9VJQ5 SMR:Q9VJQ5 IntAct:Q9VJQ5 MINT:MINT-823185
STRING:Q9VJQ5 PaxDb:Q9VJQ5 EnsemblMetazoa:FBtr0080695 GeneID:34875
KEGG:dme:Dmel_CG4185 UCSC:CG4185-RA CTD:34875 FlyBase:FBgn0028926
InParanoid:Q9VJQ5 OrthoDB:EOG47WM56 PhylomeDB:Q9VJQ5
GenomeRNAi:34875 NextBio:790647 Bgee:Q9VJQ5 GermOnline:CG4185
Uniprot:Q9VJQ5
Length = 183
Score = 177 (67.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 47/150 (31%), Positives = 78/150 (52%)
Query: 2 PLREQDRF-LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEK 60
P E D LP A++ KI+K+ +P + ++A ++RE + C SEFI I+SEA++ C++
Sbjct: 11 PSAEDDELTLPRASINKIIKELVP-TVRVANESRELILNCCSEFIHLISSEANEVCNMRN 69
Query: 61 RKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSG 120
+KTIN E +L A+ LGF Y + + L +E + Q +E++
Sbjct: 70 KKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRR------QSTRLENLGIPEE 123
Query: 121 TILEQQNGQNETIAKDARECVQECVSEFIS 150
+L QQ E AK E +E +++S
Sbjct: 124 ELLRQQQ---ELFAKAREEQAREEQQQWMS 150
Score = 138 (53.6 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
+A ++RE + C SEFI I+SEA++ C++ +KTIN E +L A+ LGF Y + +
Sbjct: 38 VANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVLEALERLGFHDYKQEAEAV 97
Query: 193 LQKYRE 198
L +E
Sbjct: 98 LHDCKE 103
>UNIPROTKB|Q5ZMV3 [details] [associations]
symbol:DR1 "Protein Dr1" species:9031 "Gallus gallus"
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 EMBL:AJ719281 IPI:IPI00571608
RefSeq:NP_001008478.1 UniGene:Gga.3162 ProteinModelPortal:Q5ZMV3
SMR:Q5ZMV3 STRING:Q5ZMV3 Ensembl:ENSGALT00000009417 GeneID:424496
KEGG:gga:424496 CTD:1810 GeneTree:ENSGT00550000075010
InParanoid:Q5ZMV3 OMA:NKKTINA OrthoDB:EOG4WM4W5 NextBio:20826822
Uniprot:Q5ZMV3
Length = 176
Score = 176 (67.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + ++ ++ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>UNIPROTKB|Q2KJ19 [details] [associations]
symbol:DR1 "Down-regulator of transcription 1, TBP-binding
(Negative cofactor 2)" species:9913 "Bos taurus" [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 GeneTree:ENSGT00550000075010
OMA:NKKTINA OrthoDB:EOG4WM4W5 HOVERGEN:HBG002051 EMBL:DAAA02007887
EMBL:BC105564 IPI:IPI00717517 RefSeq:NP_001039984.1
UniGene:Bt.42356 SMR:Q2KJ19 STRING:Q2KJ19
Ensembl:ENSBTAT00000011514 GeneID:613828 KEGG:bta:613828
InParanoid:Q2KJ19 NextBio:20898794 Uniprot:Q2KJ19
Length = 176
Score = 176 (67.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + ++ ++ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>UNIPROTKB|Q01658 [details] [associations]
symbol:DR1 "Protein Dr1" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017025 "TBP-class protein binding" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0003714 GO:GO:0003677
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 GO:GO:0017025 PDB:1JFI
PDBsum:1JFI eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:M97388 EMBL:BT006972 EMBL:AL137159 EMBL:BC002809 EMBL:BC035507
EMBL:BC068553 IPI:IPI00008991 PIR:A43320 RefSeq:NP_001929.1
UniGene:Hs.348418 ProteinModelPortal:Q01658 SMR:Q01658
IntAct:Q01658 MINT:MINT-204839 STRING:Q01658 PhosphoSite:Q01658
DMDM:401162 PaxDb:Q01658 PeptideAtlas:Q01658 PRIDE:Q01658
DNASU:1810 Ensembl:ENST00000370267 Ensembl:ENST00000370272
GeneID:1810 KEGG:hsa:1810 UCSC:uc001dpu.3 GeneCards:GC01P093811
HGNC:HGNC:3017 MIM:601482 neXtProt:NX_Q01658 PharmGKB:PA27475
HOVERGEN:HBG002051 InParanoid:Q01658 PhylomeDB:Q01658
EvolutionaryTrace:Q01658 GenomeRNAi:1810 NextBio:7377
ArrayExpress:Q01658 Bgee:Q01658 CleanEx:HS_DR1
Genevestigator:Q01658 GermOnline:ENSG00000117505 Uniprot:Q01658
Length = 176
Score = 176 (67.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + ++ ++ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>RGD|1305201 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10116
"Rattus norvegicus" [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 RGD:1305201
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BC083822 IPI:IPI00362084 RefSeq:NP_001011914.1
RefSeq:XP_003751365.1 UniGene:Rn.6666 ProteinModelPortal:Q5XI68
SMR:Q5XI68 STRING:Q5XI68 PhosphoSite:Q5XI68 PRIDE:Q5XI68
Ensembl:ENSRNOT00000000080 GeneID:100910207 GeneID:289881
KEGG:rno:100910207 KEGG:rno:289881 UCSC:RGD:1305201
InParanoid:Q5XI68 NextBio:630458 Genevestigator:Q5XI68
GermOnline:ENSRNOG00000000070 Uniprot:Q5XI68
Length = 176
Score = 176 (67.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAKDARECVQECVSEF-ISFITSEASDR 159
+ Q +A+ +Q+ + ++ ++ AS++
Sbjct: 127 AKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>MGI|MGI:1100515 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 MGI:MGI:1100515
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
eggNOG:COG5150 HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:AK031057 EMBL:AK075713 EMBL:AK090113 EMBL:AK139866
EMBL:AK146573 EMBL:BC013461 IPI:IPI00128424 RefSeq:NP_080382.2
UniGene:Mm.303534 ProteinModelPortal:Q91WV0 SMR:Q91WV0
STRING:Q91WV0 PhosphoSite:Q91WV0 PaxDb:Q91WV0 PRIDE:Q91WV0
Ensembl:ENSMUST00000031190 GeneID:13486 KEGG:mmu:13486
UCSC:uc008ynt.1 InParanoid:Q91WV0 NextBio:283989 Bgee:Q91WV0
CleanEx:MM_DR1 Genevestigator:Q91WV0 GermOnline:ENSMUSG00000029265
Uniprot:Q91WV0
Length = 176
Score = 175 (66.7 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 41/132 (31%), Positives = 75/132 (56%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI I+SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAK 135
+ Q +A+
Sbjct: 127 AKARQQQAELAQ 138
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KEVLQECKTVALKRRK 103
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI I+SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
>ZFIN|ZDB-GENE-061013-797 [details] [associations]
symbol:dr1 "down-regulator of transcription 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 ZFIN:ZDB-GENE-061013-797 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BX511118 EMBL:CU929159 EMBL:BC124605 IPI:IPI00800622
RefSeq:NP_001070782.1 RefSeq:XP_003198826.1 UniGene:Dr.115546
SMR:Q08BR1 STRING:Q08BR1 Ensembl:ENSDART00000083401
Ensembl:ENSDART00000127108 Ensembl:ENSDART00000129855
Ensembl:ENSDART00000151060 GeneID:100536903 GeneID:768171
KEGG:dre:100536903 KEGG:dre:768171 InParanoid:Q08BR1
NextBio:20918487 Uniprot:Q08BR1
Length = 176
Score = 173 (66.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 40/132 (30%), Positives = 75/132 (56%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
+ D +P A + K++K+ +P ++A DARE V C +EFI ++SEA++ C+ ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTI 66
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
+ E ++ A+ +LGF SY+ +K LQ+ + A K K+ + I E++ + +
Sbjct: 67 SPEHVINALESLGFGSYIAEVKDVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 124 EQQNGQNETIAK 135
+ Q +A+
Sbjct: 127 AKARQQQAELAQ 138
Score = 148 (57.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 130 NETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPL 189
N +A DARE V C +EFI ++SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +
Sbjct: 28 NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTISPEHVINALESLGFGSYIAEV 87
Query: 190 KIYLQKYRE-ATKGEK 204
K LQ+ + A K K
Sbjct: 88 KDVLQECKTVALKRRK 103
Score = 105 (42.0 bits), Expect = 0.00083, P = 0.00083
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 204 KFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYRE-ATKGEKS 262
+FI ++SEA++ C+ ++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A K K+
Sbjct: 45 EFIHLVSSEANEICNKSEKKTISPEHVINALESLGFGSYIAEVKDVLQECKTVALKRRKA 104
>FB|FBgn0043002 [details] [associations]
symbol:Chrac-14 "Chromatin accessibility complex 14kD
protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC"
evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0006974
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0042766
GO:GO:0008623 eggNOG:NOG150487 KO:K02326
GeneTree:ENSGT00550000074689 OMA:TALAHKQ UniGene:Dm.3099
EMBL:AY070970 EMBL:AJ271141 RefSeq:NP_476646.2 RefSeq:NP_476647.2
PDB:2BYK PDB:2BYM PDBsum:2BYK PDBsum:2BYM SMR:Q9V444 IntAct:Q9V444
MINT:MINT-781706 STRING:Q9V444 EnsemblMetazoa:FBtr0100267
EnsemblMetazoa:FBtr0100268 GeneID:3772329 KEGG:dme:Dmel_CG13399
UCSC:CG13399-RA CTD:3772329 FlyBase:FBgn0043002 InParanoid:Q9V444
OrthoDB:EOG4RN8S4 EvolutionaryTrace:Q9V444 GenomeRNAi:3772329
NextBio:853337 Uniprot:Q9V444
Length = 128
Score = 173 (66.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
R +D LP A + +++K+A+PES ++K+AR + S F F+TS ++ H + KT
Sbjct: 4 RIEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKT 63
Query: 64 INGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTIL 123
I +DIL ++ L F+S+V L L+ YR+ K +K + E+ S+
Sbjct: 64 ITAKDILQTLTELDFESFVPSLTQDLEVYRKVVKEKKESKASKKDSNTAENANASATATA 123
Query: 124 EQ 125
E+
Sbjct: 124 EE 125
Score = 130 (50.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 120 GTILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSA 179
G ++++ ++ +++K+AR + S F F+TS ++ H + KTI +DIL ++
Sbjct: 16 GRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTE 75
Query: 180 LGFDSYVEPLKIYLQKYREATKGEK 204
L F+S+V L L+ YR+ K +K
Sbjct: 76 LDFESFVPSLTQDLEVYRKVVKEKK 100
Score = 98 (39.6 bits), Expect = 0.00015, P = 0.00015
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 205 FISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEK 261
F F+TS ++ H + KTI +DIL ++ L F+S+V L L+ YR+ K +K
Sbjct: 44 FAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFESFVPSLTQDLEVYRKVVKEKK 100
>DICTYBASE|DDB_G0269638 [details] [associations]
symbol:dr1 "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 dictyBase:DDB_G0269638 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
PANTHER:PTHR11064:SF8 OMA:NKKTINA RefSeq:XP_646136.1 HSSP:Q01658
ProteinModelPortal:Q55DJ5 STRING:Q55DJ5 EnsemblProtists:DDB0216393
GeneID:8617086 KEGG:ddi:DDB_G0269638 ProtClustDB:CLSZ2729292
Uniprot:Q55DJ5
Length = 178
Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 36/104 (34%), Positives = 62/104 (59%)
Query: 4 REQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 63
+E + LP A V+K++K+ +P+ K + + R+ + EC EFI I+SEA+D C E+++T
Sbjct: 7 KEDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRT 66
Query: 64 INGEDILFAMSALGFDSYVEPLK-IY-LQKYREATKGEKSVNCE 105
I E ++ A++ LGF Y + + +Y K +TK + S E
Sbjct: 67 IAAEHVIKALTELGFSDYTQKVSDVYDKHKLEVSTKSKSSKKFE 110
Score = 136 (52.9 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 35/140 (25%), Positives = 72/140 (51%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
++++ Q+ + + R+ + EC EFI I+SEA+D C E+++TI E ++ A++ LG
Sbjct: 21 LIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTIAAEHVIKALTELG 80
Query: 182 FDSYVEPLKIYLQKYR-EATKGEKFISFITSEASDRCHLEKRKTINGEDILFAMSALGFD 240
F Y + + K++ E + K +S+ + + I + +LFA + F
Sbjct: 81 FSDYTQKVSDVYDKHKLEVSTKSK-----SSKKFENLGKPTEQLIREQQLLFAKARSAFQ 135
Query: 241 SYVEPLKIY-LQKYREATKG 259
+ E ++ LQ+ ++ +G
Sbjct: 136 ASPEAQQLQQLQQQQQQQQG 155
>CGD|CAL0002303 [details] [associations]
symbol:NCB2 species:5476 "Candida albicans" [GO:0003713
"transcription coactivator activity" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 43/137 (31%), Positives = 75/137 (54%)
Query: 6 QDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTIN 65
+D LP A V KI+ + +P+ IAK+ARE + EC EFI ++++++D E +KTI
Sbjct: 10 EDLSLPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIA 69
Query: 66 GEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTILEQ 125
+ ++ A+ L F Y++ + L +++E KG++ N + FQ+SG E+
Sbjct: 70 SDHVVKALEELDFKIYLDIINKILDEHKELLKGKEKRN----------NKFQNSGLTEEE 119
Query: 126 QNGQNETIAKDARECVQ 142
Q E + K +R +Q
Sbjct: 120 LLRQQEELFKKSRARLQ 136
Score = 125 (49.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
IAK+ARE + EC EFI ++++++D E +KTI + ++ A+ L F Y++ +
Sbjct: 33 IAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIASDHVVKALEELDFKIYLDIINKI 92
Query: 193 LQKYREATKGEK 204
L +++E KG++
Sbjct: 93 LDEHKELLKGKE 104
>UNIPROTKB|Q5A0I6 [details] [associations]
symbol:NCB2 "Putative uncharacterized protein NCB2"
species:237561 "Candida albicans SC5314" [GO:0003713 "transcription
coactivator activity" evidence=IMP] [GO:0035690 "cellular response
to drug" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 43/137 (31%), Positives = 75/137 (54%)
Query: 6 QDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTIN 65
+D LP A V KI+ + +P+ IAK+ARE + EC EFI ++++++D E +KTI
Sbjct: 10 EDLSLPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIA 69
Query: 66 GEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTILEQ 125
+ ++ A+ L F Y++ + L +++E KG++ N + FQ+SG E+
Sbjct: 70 SDHVVKALEELDFKIYLDIINKILDEHKELLKGKEKRN----------NKFQNSGLTEEE 119
Query: 126 QNGQNETIAKDARECVQ 142
Q E + K +R +Q
Sbjct: 120 LLRQQEELFKKSRARLQ 136
Score = 125 (49.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 133 IAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKIY 192
IAK+ARE + EC EFI ++++++D E +KTI + ++ A+ L F Y++ +
Sbjct: 33 IAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIASDHVVKALEELDFKIYLDIINKI 92
Query: 193 LQKYREATKGEK 204
L +++E KG++
Sbjct: 93 LDEHKELLKGKE 104
>UNIPROTKB|G5EHZ6 [details] [associations]
symbol:MGCH7_ch7g579 "Negative cofactor 2 complex subunit
beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 GO:GO:0000122 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CM000230 EMBL:CM001237
PANTHER:PTHR11064:SF8 GO:GO:0017054 RefSeq:XP_003720914.1
ProteinModelPortal:G5EHZ6 EnsemblFungi:MGG_02824T0 GeneID:2682377
KEGG:mgr:MGG_02824 Uniprot:G5EHZ6
Length = 138
Score = 159 (61.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 41/112 (36%), Positives = 64/112 (57%)
Query: 7 DRFLPIANVAKIMKKAIPESGKI--AKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
D LP A V KI+ + +P+S I +K+AR+ + EC EFI+ I+SEA++ E +KTI
Sbjct: 11 DLSLPKATVQKIVSEILPQSDGITYSKEARDLLIECCVEFITLISSEANEISDKEAKKTI 70
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYREATKG-EKSVNCEVYQEISVEDV 115
+ I A+ LGF YV + +++E KG EK N +S+E++
Sbjct: 71 ACDHITKALEVLGFSEYVPAVLEAAAEHKEVQKGREKKANKFEQSGLSLEEL 122
Score = 129 (50.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 41/116 (35%), Positives = 61/116 (52%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
IL Q +G T +K+AR+ + EC EFI+ I+SEA++ E +KTI + I A+ LG
Sbjct: 26 ILPQSDGI--TYSKEARDLLIECCVEFITLISSEANEISDKEAKKTIACDHITKALEVLG 83
Query: 182 FDSYVEPLKIYLQKYREATKG--EKFISFITSEASDRCHLEKRKTINGEDILFAMS 235
F YV + +++E KG +K F S S LE+ + I E+ A S
Sbjct: 84 FSEYVPAVLEAAAEHKEVQKGREKKANKFEQSGLS----LEELERIQAEEFAKAAS 135
>ASPGD|ASPL0000055867 [details] [associations]
symbol:AN9358 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0003714 EMBL:BN001308 GO:GO:0043565
GO:GO:0045944 GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 PANTHER:PTHR11064:SF8 OMA:NKKTINA GO:GO:0017054
ProteinModelPortal:C8VR63 EnsemblFungi:CADANIAT00001145
Uniprot:C8VR63
Length = 145
Score = 158 (60.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 40/114 (35%), Positives = 65/114 (57%)
Query: 7 DRFLPIANVAKIMKKAIP-ESGK-IAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
D LP A V KI+ + +P SG+ +KDAR+ + EC EFI+ I+SEA+D E +KTI
Sbjct: 11 DLSLPKATVQKIITEILPPSSGQSFSKDARDLLMECCVEFITLISSEANDISEKEAKKTI 70
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQE-ISVEDVFQ 117
E + A+ LGF YV + ++++E K + ++ Q +S E++ +
Sbjct: 71 ACEHVERALRDLGFGDYVPDVLAVAEEHKEQLKSREKKQSKMEQSGLSEEELLR 124
Score = 132 (51.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 122 ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALG 181
IL +GQ+ +KDAR+ + EC EFI+ I+SEA+D E +KTI E + A+ LG
Sbjct: 26 ILPPSSGQS--FSKDARDLLMECCVEFITLISSEANDISEKEAKKTIACEHVERALRDLG 83
Query: 182 FDSYVEPLKIYLQKYREATKGEK 204
F YV + ++++E K +
Sbjct: 84 FGDYVPDVLAVAEEHKEQLKSRE 106
>POMBASE|SPBC30D10.02 [details] [associations]
symbol:SPBC30D10.02 "transcription corepressor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0000785 "chromatin" evidence=NAS]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PomBase:SPBC30D10.02 GO:GO:0005829
GO:GO:0005634 GO:GO:0003714 EMBL:CU329671 GO:GO:0043565
GO:GO:0000785 GenomeReviews:CU329671_GR GO:GO:0000122
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 OMA:NKKTINA HSSP:Q01658
PIR:T40194 RefSeq:NP_596283.1 ProteinModelPortal:O14348
STRING:O14348 EnsemblFungi:SPBC30D10.02.1 GeneID:2540406
KEGG:spo:SPBC30D10.02 OrthoDB:EOG41NXWS NextBio:20801533
Uniprot:O14348
Length = 161
Score = 154 (59.3 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 39/131 (29%), Positives = 71/131 (54%)
Query: 10 LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDI 69
LP A V K++ +P K+AR+ + EC EFI ++SEA++ C E +KTI E I
Sbjct: 12 LPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTIAAEHI 71
Query: 70 LFAMSALGFDSYV-EPLKIYLQKYREATKGEKSVNCEVYQE-ISVEDVFQSSGTILEQ-- 125
+ A+ L F Y+ E L++ + ++E K + + + Q +S +++ + +L +
Sbjct: 72 IKALENLEFKEYIAEALEVAAE-HKEQQKNREKKSSKFEQSGVSRDELLRQQEELLSRAR 130
Query: 126 QNGQNETIAKD 136
+ +N+ IA D
Sbjct: 131 ERFKNQNIAHD 141
Score = 123 (48.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 132 TIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYV-EPLK 190
T K+AR+ + EC EFI ++SEA++ C E +KTI E I+ A+ L F Y+ E L+
Sbjct: 30 TFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTIAAEHIIKALENLEFKEYIAEALE 89
Query: 191 IYLQ-KYREATKGEKFISFITSEAS 214
+ + K ++ + +K F S S
Sbjct: 90 VAAEHKEQQKNREKKSSKFEQSGVS 114
>UNIPROTKB|Q8W0W9 [details] [associations]
symbol:Dr1 "Repressor protein" species:4530 "Oryza sativa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
PANTHER:PTHR11064:SF8 HSSP:Q01658 EMBL:AF464902
ProteinModelPortal:Q8W0W9 IntAct:Q8W0W9 KEGG:dosa:Os08t0383700-02
Gramene:Q8W0W9 Genevestigator:Q8W0W9 Uniprot:Q8W0W9
Length = 296
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 36/114 (31%), Positives = 68/114 (59%)
Query: 5 EQDRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
++D LP + + KI+K+ +P ++A+DA++ + EC EFI+ ++SE+++ C E +KTI
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTI 70
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYREAT----KGEKSVNCEVYQEISVED 114
E +L A+ LGF Y+E ++ + ++ T K K E+ +E +V +
Sbjct: 71 APEHVLRALQDLGFREYIEEVQAAYEHHKHDTLDSPKASKFTGVEMTEEQAVAE 124
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 111 SVEDVFQSSGT---ILEQQNGQNETIAKDARECVQECVSEFISFITSEASDRCHLEKRKT 167
S EDV T I+++ + +A+DA++ + EC EFI+ ++SE+++ C E +KT
Sbjct: 10 SKEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKT 69
Query: 168 INGEDILFAMSALGFDSYVEPLKIYLQKYREAT----KGEKFISF-ITSEAS----DRCH 218
I E +L A+ LGF Y+E ++ + ++ T K KF +T E + R
Sbjct: 70 IAPEHVLRALQDLGFREYIEEVQAAYEHHKHDTLDSPKASKFTGVEMTEEQAVAEQQRMF 129
Query: 219 LEKRKTIN 226
E R +N
Sbjct: 130 AEARARMN 137
>DICTYBASE|DDB_G0272222 [details] [associations]
symbol:ybl1 "YB-like 1" species:44689 "Dictyostelium
discoideum" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
dictyBase:DDB_G0272222 GO:GO:0005634 GO:GO:0043565
GenomeReviews:CM000151_GR Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AAFI02000008 GO:GO:0003887 eggNOG:NOG150487 KO:K02326
HSSP:Q9V444 RefSeq:XP_645298.1 ProteinModelPortal:Q75JQ9
STRING:Q75JQ9 EnsemblProtists:DDB0216318 GeneID:8618464
KEGG:ddi:DDB_G0272222 OMA:TALAHKQ Uniprot:Q75JQ9
Length = 138
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 10 LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDI 69
LP A V +I+K ++PE AK++R + + +I ++T+ + D R TI+ +D+
Sbjct: 7 LPGAIVNRIIKASLPEGVLCAKESRLAIAKAAKVWIHYLTAASIDFSSHSGRSTISPKDV 66
Query: 70 LFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVEDVFQSSGTILEQQNGQ 129
A+ + F+++ L+ YL + + EK E +E E T + +N
Sbjct: 67 FQAIEEIDFENFKPQLEEYLAALKSEKEKEKEKEKEKEKEKEKEKDSNKDDTKSKDENKS 126
Query: 130 NETIAKDARE 139
++ + +++
Sbjct: 127 SKKSSSSSKD 136
>SGD|S000002805 [details] [associations]
symbol:NCB2 "Subunit of a heterodimeric NC2 transcription
regulator complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IGI;IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 SGD:S000002805 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 EMBL:BK006938 GO:GO:0006351
GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:U32274 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010 HSSP:Q01658
OrthoDB:EOG41NXWS GO:GO:0017054 EMBL:U91948 EMBL:Y09266 PIR:S69694
RefSeq:NP_010685.1 ProteinModelPortal:Q92317 SMR:Q92317
DIP:DIP-2067N IntAct:Q92317 MINT:MINT-528090 STRING:Q92317
PaxDb:Q92317 EnsemblFungi:YDR397C GeneID:852006 KEGG:sce:YDR397C
CYGD:YDR397c NextBio:970198 Genevestigator:Q92317
GermOnline:YDR397C Uniprot:Q92317
Length = 146
Score = 112 (44.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/121 (23%), Positives = 62/121 (51%)
Query: 10 LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDI 69
LP A V K++ + + + KDARE + EFI ++S AS+ E +KTI E +
Sbjct: 10 LPKATVQKMISEILDQDLMFTKDAREIIINSGIEFIMILSSMASEMADNEAKKTIAPEHV 69
Query: 70 LFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQE-ISVEDVFQSSGTILEQQNG 128
+ A+ L ++ ++ L+ L ++ + K +++ + + + +S E++ + + Q
Sbjct: 70 IKALEELEYNEFIPFLEEILLNFKGSQKVKETRDSKFKKSGLSEEELLRQQEELFRQSRS 129
Query: 129 Q 129
+
Sbjct: 130 R 130
>TAIR|locus:2038648 [details] [associations]
symbol:NF-YB11 ""nuclear factor Y, subunit B11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC006232 KO:K02326
OMA:HANEATL HSSP:Q13952 EMBL:BT004083 IPI:IPI00535292 PIR:C84673
RefSeq:NP_180316.1 UniGene:At.26474 UniGene:At.48523
ProteinModelPortal:Q9ZQH2 SMR:Q9ZQH2 PaxDb:Q9ZQH2 PRIDE:Q9ZQH2
EnsemblPlants:AT2G27470.1 GeneID:817292 KEGG:ath:AT2G27470
TAIR:At2g27470 eggNOG:NOG301039 HOGENOM:HOG000154037
InParanoid:Q9ZQH2 PhylomeDB:Q9ZQH2 ProtClustDB:CLSN2913083
ArrayExpress:Q9ZQH2 Genevestigator:Q9ZQH2 Uniprot:Q9ZQH2
Length = 275
Score = 130 (50.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 10 LPIANVAKIMKKAIPESG-----KIAKDARECVQECVSEFISFITSEASDRCHLEKRKTI 64
LP+A V +++KK + E I K+A E FI ++++ A+D C +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 65 NGEDILFAMSALGFDSYVEPLKIYLQKYREATKGEKS 101
+D+ A+ + F ++EPLK L+ +++ G+K+
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKA 107
Score = 110 (43.8 bits), Expect = 0.00089, P = 0.00089
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 132 TIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDILFAMSALGFDSYVEPLKI 191
+I K+A E FI ++++ A+D C +R+T+ +D+ A+ + F ++EPLK
Sbjct: 34 SIHKEALLAFSESARIFIHYLSATANDFCKDARRQTMKADDVFKALEEMDFSEFLEPLKS 93
Query: 192 YLQKYREATKGEK 204
L+ +++ G+K
Sbjct: 94 SLEDFKKKNAGKK 106
>WB|WBGene00001092 [details] [associations]
symbol:dro-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:Z81546 eggNOG:COG5150 HOGENOM:HOG000178641
GeneTree:ENSGT00550000075010 OMA:NKKTINA HSSP:Q01658 PIR:T22529
RefSeq:NP_499750.1 UniGene:Cel.10656 ProteinModelPortal:O45550
SMR:O45550 STRING:O45550 PaxDb:O45550 EnsemblMetazoa:F53A2.5
GeneID:191629 KEGG:cel:CELE_F53A2.5 UCSC:F53A2.5 CTD:191629
WormBase:F53A2.5 InParanoid:O45550 NextBio:949738 Uniprot:O45550
Length = 184
Score = 117 (46.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/123 (27%), Positives = 61/123 (49%)
Query: 10 LPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTINGEDI 69
LP + +I+K+ +PE +IA ++R+ + C EF+ I EA ++RKTI E +
Sbjct: 22 LPQKGINQIIKEVVPEM-RIANESRDMINACCVEFVKHIAREAQRIASQDQRKTIYHEHV 80
Query: 70 LFAMSALGFD-SYVEPLKIYLQKYR-EATKGEKSVNCEVYQ-EISVEDVFQSSGTILEQQ 126
A+ LGF Y+E L + EA K + N + + I E +++ ++++
Sbjct: 81 QKALQNLGFTPDYLEAADSVLDACKVEAEKKLRRKNSRLEKCGIPEEKLYEMQQELIQKA 140
Query: 127 NGQ 129
Q
Sbjct: 141 RQQ 143
>POMBASE|SPBC3D6.09 [details] [associations]
symbol:dpb4 "DNA polymerase epsilon subunit Dpb4"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IC] [GO:0006270 "DNA replication initiation"
evidence=IGI] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043596 "nuclear replication fork" evidence=IC]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
PomBase:SPBC3D6.09 GO:GO:0005829 EMBL:CU329671 GO:GO:0043565
GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0006270
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008622 GO:GO:0003887
PIR:T40369 RefSeq:NP_595521.1 ProteinModelPortal:P87174
IntAct:P87174 STRING:P87174 EnsemblFungi:SPBC3D6.09.1
GeneID:2540966 KEGG:spo:SPBC3D6.09 eggNOG:NOG150487 KO:K02326
OMA:AMINSAT OrthoDB:EOG4TQQKQ NextBio:20802081 Uniprot:P87174
Length = 210
Score = 116 (45.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 34/147 (23%), Positives = 72/147 (48%)
Query: 7 DRFLPIANVAKIMKKAIPESGKIAKDARECVQECVSEFISFITSEASDRCHLEKRKTING 66
D LP + + +++K +PE + K+A + + + F+SF+TS + + RK +
Sbjct: 14 DLALPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIATNNNRKILMP 73
Query: 67 EDILFAMSALGFDSYVEPLKIYLQKYREATKGEKSVNCEVYQEISVE-----DVFQSSGT 121
+D+L A+ + + + + LK +L+ Y A K EK + ++ D ++
Sbjct: 74 QDVLNALDEIEYPEFSKTLKKHLEAYELALK-EKRLKLPNVSDVDNRKKAKIDAHDTTPL 132
Query: 122 ILEQQNGQNETIAKD-ARECVQECVSE 147
E+ + E IA+D A+ V++ + +
Sbjct: 133 DEEKDELEEERIAEDIAQNEVEQNIDD 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 296 296 0.00093 115 3 11 22 0.41 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 532 (57 KB)
Total size of DFA: 163 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 25.17u 0.06s 25.23t Elapsed: 00:00:06
Total cpu time: 25.18u 0.06s 25.24t Elapsed: 00:00:07
Start: Thu Aug 15 11:40:55 2013 End: Thu Aug 15 11:41:02 2013