BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy346
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5TJF5|DHB8_CANFA Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8
PE=3 SV=1
Length = 259
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
H + DVS + + ++ FSRPP+V+V+CAG+TRD + L+++E D+ +V VN
Sbjct: 66 AHTAFQADVSEAGAVRRLLEQVQACFSRPPSVVVSCAGLTRDEFLLRMSEDDWDRVIAVN 125
Query: 67 LK 68
LK
Sbjct: 126 LK 127
>sp|P50171|DHB8_MOUSE Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1
SV=2
Length = 259
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
H + DVS + ++ FSRPP+V+V+CAGITRD + L ++E+D+ +V VNL
Sbjct: 67 HAAFQADVSQGPAARRLLEEVQACFSRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNL 126
Query: 68 K 68
K
Sbjct: 127 K 127
>sp|Q9XT00|DHB8_PIG Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3
SV=2
Length = 259
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DVS T + ++ F RPP+V+V+CAGITRD + L+++E D+ +V VNLK
Sbjct: 73 DVSEAETARRLLEQVQAYFFRPPSVVVSCAGITRDEFLLRMSEDDWDKVIAVNLK 127
>sp|Q92506|DHB8_HUMAN Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1
SV=2
Length = 261
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
H + DVS + ++ FSRPP+V+V+CAGIT+D + L ++E D+ +V VNL
Sbjct: 69 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 128
Query: 68 K 68
K
Sbjct: 129 K 129
>sp|Q6MGB5|DHB8_RAT Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8
PE=3 SV=1
Length = 259
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
H + DVS + ++ F RPP+V+V+CAGITRD + L ++E+D+ +V VNL
Sbjct: 67 HAAFQADVSEGPAAKRLLEQVQACFFRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNL 126
Query: 68 K 68
K
Sbjct: 127 K 127
>sp|Q9KQH7|FABG_VIBCH 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabG PE=1 SV=2
Length = 244
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+ ++V+N +I + AI ++F ++LVN AGITRDN +++ E+++ + + NL +
Sbjct: 56 MALNVTNPESIEAVLKAITDEFG-GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSI 114
Query: 71 DR 72
R
Sbjct: 115 FR 116
>sp|P73574|FABG1_SYNY3 3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabG1 PE=3 SV=1
Length = 247
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 1 MLTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQ 60
++ +++ +V+N + + +KFSR +VLVN AGITRD L++ +D+Q
Sbjct: 51 IIANGGEAIAVQANVANADEVDQLIKTTLDKFSRI-DVLVNNAGITRDTLLLRMKLEDWQ 109
Query: 61 QVFDVNL 67
V D+NL
Sbjct: 110 AVIDLNL 116
>sp|P73826|FABG2_SYNY3 3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabG2 PE=3 SV=1
Length = 240
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G++ L + +V++ +++ A + I +K V+ N AGIT+DN+F KLT D+ V
Sbjct: 45 GNTEALGVVANVTDLESMTAAAAEITDKLGPVYGVVAN-AGITKDNFFPKLTPADWDAVL 103
Query: 64 DVNLKLV 70
+VNLK V
Sbjct: 104 NVNLKGV 110
>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=fabG PE=3 SV=1
Length = 246
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
++V++ I + + +K+ R +VLVN AGITRD +++ E+D+ V +VNLK V
Sbjct: 61 LNVTDRDQIKEVVEKVVQKYGRI-DVLVNNAGITRDALLVRMKEEDWDAVINVNLKGV 117
>sp|P0AEK3|FABG_SHIFL 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Shigella
flexneri GN=fabG PE=3 SV=1
Length = 244
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL V
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 71 DR 72
R
Sbjct: 115 FR 116
>sp|P0AEK2|FABG_ECOLI 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Escherichia coli
(strain K12) GN=fabG PE=1 SV=1
Length = 244
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ ++++ + + NL V
Sbjct: 56 LMLNVTDPASIESVLEKIRAEFG-EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 71 DR 72
R
Sbjct: 115 FR 116
>sp|Q99714|HCD2_HUMAN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10
PE=1 SV=3
Length = 261
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL------TEKDFQQVFDV 65
P DV++ + TA++ K KF R +V VNCAGI + L T +DFQ+V DV
Sbjct: 62 PADVTSEKDVQTALALAKGKFGR-VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 66 NL 67
NL
Sbjct: 121 NL 122
>sp|P45375|PHBB_ALLVD Acetoacetyl-CoA reductase OS=Allochromatium vinosum (strain ATCC
17899 / DSM 180 / NBRC 103801 / D) GN=phbB PE=3 SV=2
Length = 246
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
DVS+ + + I E+ P ++LVNCAGITRD F K+ + ++ V +VNL V
Sbjct: 61 DVSSFDDSARMVREITEQVG-PIDILVNCAGITRDKTFKKMEQAHWEAVINVNLNSV 116
>sp|P19337|BAIA2_EUBSP Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708)
GN=baiA2 PE=2 SV=1
Length = 249
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
L D+++ + A+ + +K+ R +V++N AGIT +N F +++E++F+ + D+N+
Sbjct: 60 LGFAPDLTSRDAVMAAVGQVAQKYGRL-DVMINNAGITSNNVFSRVSEEEFKHIMDINV 117
>sp|P0A0I0|FABG_STAAW 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain MW2) GN=fabG PE=3 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|Q6G9Y2|FABG_STAAS 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain MSSA476) GN=fabG PE=3 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|Q6GHK4|FABG_STAAR 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain MRSA252) GN=fabG PE=3 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|P99093|FABG_STAAN 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain N315) GN=fabG PE=1 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|P0A0H9|FABG_STAAM 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|Q5HGK2|FABG_STAAC 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
aureus (strain COL) GN=fabG PE=3 SV=2
Length = 246
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 SNTSTISTAMSAIKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
+N + + IKE S+ +VLVN AGITRDN +++ E+++ V D NLK V
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGV 117
>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus
subtilis (strain 168) GN=fabG PE=3 SV=3
Length = 246
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFS--RPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+++ DVSN + + IKE S ++LVN AGITRDN +++ E ++ V ++N
Sbjct: 57 IAVKADVSNPEDVQ---NMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININ 113
Query: 67 LKLV 70
LK V
Sbjct: 114 LKGV 117
>sp|P71534|FABG_MYCS2 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=fabG PE=3
SV=2
Length = 255
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
DV++++ + A ++E P VLV AGI++D + +++TE+ F++V + NL
Sbjct: 69 DVTDSAAVDRAFKEVEEH-QGPVEVLVANAGISKDAFLMRMTEERFEEVINTNL 121
>sp|Q9Z8P2|FABG_CHLPN 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Chlamydia
pneumoniae GN=fabG PE=3 SV=1
Length = 248
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 2 LTGSSTHLSLP-MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQ 60
LTG +S +DVS+ + + +K ++ ++LVN AGITRDN ++++E D+Q
Sbjct: 51 LTGLGGEVSFARVDVSHNGGVKDCVQKFLDKHNKI-DILVNNAGITRDNLLMRMSEDDWQ 109
Query: 61 QVFDVNL 67
V NL
Sbjct: 110 SVISTNL 116
>sp|P0A5Y4|FABG_MYCTU 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 OS=Mycobacterium
tuberculosis GN=fabG1 PE=1 SV=1
Length = 247
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL
Sbjct: 61 DVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 113
>sp|P0A5Y5|FABG_MYCBO 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=fabG PE=3
SV=1
Length = 247
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL
Sbjct: 61 DVTDSDAVDRAFTAVEEH-QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANL 113
>sp|P0A2C9|FABG_SALTY 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fabG PE=1 SV=1
Length = 244
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ + ++ + + NL V
Sbjct: 56 LMLNVTDPASIESVLENIRAEFG-EVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSV 114
Query: 71 DR 72
R
Sbjct: 115 FR 116
>sp|P0A2D0|FABG_SALTI 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Salmonella typhi
GN=fabG PE=3 SV=1
Length = 244
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
L ++V++ ++I + + I+ +F ++LVN AGITRDN +++ + ++ + + NL V
Sbjct: 56 LMLNVTDPASIESVLENIRAEFG-EVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSV 114
Query: 71 DR 72
R
Sbjct: 115 FR 116
>sp|P07914|BAIA1_EUBSP Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708)
GN=baiA1 PE=1 SV=3
Length = 249
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
L D+++ + A+ + +K+ R +V++N AGIT ++ F +++E+DF+ + D+N+
Sbjct: 60 LGFAPDLTSRDAVMAAVGTVAQKYGRL-DVMINNAGITMNSVFSRVSEEDFKNIMDINV 117
>sp|P66782|Y1385_MYCBO Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fabG2 PE=3 SV=1
Length = 247
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ 61
L G L++ DV+ + + E+F +V+VN AGITRD +TE+ F Q
Sbjct: 51 LGGDDVALAVRCDVTQADDVDILIRTAVERFG-GLDVMVNNAGITRDATMRTMTEEQFDQ 109
Query: 62 VFDVNLK 68
V V+LK
Sbjct: 110 VIAVHLK 116
>sp|P66781|Y1350_MYCTU Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium
tuberculosis GN=fabG2 PE=3 SV=1
Length = 247
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ 61
L G L++ DV+ + + E+F +V+VN AGITRD +TE+ F Q
Sbjct: 51 LGGDDVALAVRCDVTQADDVDILIRTAVERFG-GLDVMVNNAGITRDATMRTMTEEQFDQ 109
Query: 62 VFDVNLK 68
V V+LK
Sbjct: 110 VIAVHLK 116
>sp|O02691|HCD2_BOVIN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10
PE=1 SV=3
Length = 261
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI--TRDNWFLKLTE----KDFQQVFDV 65
P DV++ + A++ +EKF R +V VNCAGI + LK ++ +DFQ+V +V
Sbjct: 62 PADVTSEKDVQAALTLAREKFGR-VDVAVNCAGIAVASKTYNLKKSQAHTLEDFQRVINV 120
Query: 66 NL 67
NL
Sbjct: 121 NL 122
>sp|Q89AG9|FABG_BUCBP 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=fabG PE=3 SV=1
Length = 245
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+ + +D++N + I+ M + + F R ++L+N AGI RD + + +D+ V +VNL
Sbjct: 55 IGIKLDITNPNEITKTMDFVYKNFGRV-DILINNAGIIRDKLLINMKTQDWNSVLNVNL 112
>sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1
Length = 244
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 28 IKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
IKE S+ +VLVN AGIT+DN +++ E+++ V D NLK V
Sbjct: 71 IKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGV 115
>sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3
SV=1
Length = 244
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 28 IKEKFSR--PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
IKE S+ +VLVN AGIT+DN +++ E+++ V D NLK V
Sbjct: 71 IKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGV 115
>sp|O07399|FABG_MYCAV 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Mycobacterium
avium GN=fabG PE=3 SV=1
Length = 255
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
DV++ + A + ++E P VLV+ AGI++D + +++TE+ F +V + NL
Sbjct: 69 DVTDNDAVDRAFTEVEEH-QGPVEVLVSNAGISKDAFLIRMTEERFTEVINANL 121
>sp|O54438|FABG_PSEAE 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=fabG PE=3 SV=1
Length = 247
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKL 69
L +DVS+ +++ + I++ +P ++VN AGITRDN +++ + ++ V + NL
Sbjct: 58 GLVLDVSSDESVAATLEHIQQHLGQPL-IVVNNAGITRDNLLVRMKDDEWFDVVNTNLNS 116
Query: 70 VDR 72
+ R
Sbjct: 117 LYR 119
>sp|P50204|PHAB_PARDE Acetoacetyl-CoA reductase OS=Paracoccus denitrificans GN=phaB PE=3
SV=1
Length = 242
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 15 VSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
V++ + + ++E+ P VLVN AGITRD F K+T + +++V D NL
Sbjct: 56 VADYDACAAGIKQVEEELG-PIAVLVNNAGITRDAMFHKMTPQQWKEVIDTNL 107
>sp|P43713|FABG_HAEIN 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabG PE=3 SV=1
Length = 242
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
L ++V++ +I T + IK F ++LVN AGITRDN +++ ++++ + NL
Sbjct: 54 LVLNVTDKESIETLLEQIKNDFG-DIDILVNNAGITRDNLLMRMKDEEWFDIMQTNL 109
>sp|Q9PKF7|FABG_CHLMU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=fabG PE=3 SV=1
Length = 248
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 62
TGS +L +DVS +S + ++ +V+VN AGITRD+ ++++E+++ V
Sbjct: 55 TGSKVSFAL-VDVSKNDMVSAQVQKFLAEYG-TIDVVVNNAGITRDSLLMRMSEEEWSSV 112
Query: 63 FDVNL 67
D NL
Sbjct: 113 IDTNL 117
>sp|P72332|NODG_RHIS3 Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3
SV=1
Length = 245
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70
P ++SN + A+ E ++LVN AGIT+D F+++++ D+ V +VNL V
Sbjct: 57 FPANLSNRDEVK-ALGQKAEADLEGVDILVNNAGITKDGLFVRMSDADWDTVLEVNLTAV 115
Query: 71 DR 72
R
Sbjct: 116 FR 117
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1
SV=1
Length = 900
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 26 SAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+AIKE F R +VL+N AGI RD F K+TE++F V DV+L
Sbjct: 86 TAIKE-FGRV-DVLINNAGILRDVSFAKMTEREFASVVDVHL 125
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 2 LTGSSTHLSLPMDVSNTS--TISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDF 59
L G T + DV + I TA+S KF R ++LVN AGI RD FLK+ ++++
Sbjct: 367 LYGEGTAIPDSHDVVTEAPLIIQTAIS----KFQRV-DILVNNAGILRDKSFLKMKDEEW 421
Query: 60 QQVFDVNL 67
V V+L
Sbjct: 422 FAVLKVHL 429
>sp|Q6NUE2|CBR4_XENLA Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2
SV=1
Length = 236
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
HL+L DVS + I IK + LVN AGI+RD L+ +D + +N
Sbjct: 48 AHLALSCDVSKENEIQCTFKEIKNNLGNI-DYLVNSAGISRDALLLRTRSEDIMSLLSIN 106
Query: 67 L 67
L
Sbjct: 107 L 107
>sp|A4IFA7|CBR4_BOVIN Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1
Length = 237
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
HL+L DV+ + I++ R N LVN AGI RDN ++ +D NL
Sbjct: 50 HLALSCDVAKEHDVQNTFEEIEKNLGRV-NFLVNAAGINRDNLLVRTNTEDMLSQLHTNL 108
>sp|O08756|HCD2_MOUSE 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10
PE=1 SV=4
Length = 261
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 63
P +V++ I A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEIQAALTLAKEKFGR-IDVAVNCAGIAVAIKTYHQKKNKIHTL--EDFQRVI 118
Query: 64 DVNL 67
+VNL
Sbjct: 119 NVNL 122
>sp|P50203|PHAB_ACISR Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849)
GN=phaB PE=3 SV=1
Length = 248
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+VLVN AGITRD F K++ + + QV D NLK
Sbjct: 85 DVLVNNAGITRDATFKKMSYEQWSQVIDTNLK 116
>sp|O70351|HCD2_RAT 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus
GN=Hsd17b10 PE=1 SV=3
Length = 261
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--------RDNWFLKLTEKDFQQVF 63
P +V++ + A++ KEKF R +V VNCAGI + N L +DFQ+V
Sbjct: 62 PANVTSEKEVQAALTLAKEKFGR-IDVAVNCAGIAVAIKTYHEKKNQVHTL--EDFQRVI 118
Query: 64 DVNL 67
+VNL
Sbjct: 119 NVNL 122
>sp|O67610|FABG_AQUAE 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Aquifex aeolicus
(strain VF5) GN=fabG PE=1 SV=1
Length = 248
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 37 NVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
++LVN AGITRD FL+++ D+++V VNL
Sbjct: 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNL 117
>sp|Q9ZNN8|BUDC_CORGT L-2,3-butanediol dehydrogenase OS=Corynebacterium glutamicum
GN=budC PE=1 SV=1
Length = 258
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+DV++ + +A+ EK +VLVN AGI + L++TE+D +Q++ VN+
Sbjct: 60 LDVTDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNV 113
>sp|P14697|PHBB_CUPNH Acetoacetyl-CoA reductase OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=phbB PE=3 SV=1
Length = 246
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+V++ + TA +K + +VL+N AGITRD F K+T D+ V D NL
Sbjct: 61 NVADWDSTKTAFDKVKSEVGEV-DVLINNAGITRDVVFRKMTRADWDAVIDTNL 113
>sp|P55336|FABG_VIBHA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio harveyi
GN=fabG PE=3 SV=1
Length = 244
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKL 69
L ++V++ +I + I ++ ++LVN AGITRDN +++ + ++ + + NL
Sbjct: 55 GLALNVTDVESIEATLKTINDECG-AIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTP 113
Query: 70 VDR 72
+ R
Sbjct: 114 IYR 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,416,445
Number of Sequences: 539616
Number of extensions: 1005033
Number of successful extensions: 2617
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 2533
Number of HSP's gapped (non-prelim): 122
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)