Query psy346
Match_columns 87
No_of_seqs 137 out of 1179
Neff 10.9
Searched_HMMs 46136
Date Fri Aug 16 17:16:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy346.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/346hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4221 Short-chain alcohol de 99.8 1E-19 2.2E-24 103.0 9.4 80 6-86 53-132 (246)
2 KOG1205|consensus 99.8 1.6E-19 3.4E-24 104.8 8.6 78 7-85 64-141 (282)
3 KOG1201|consensus 99.8 6.5E-19 1.4E-23 102.1 9.8 78 7-85 87-164 (300)
4 COG0300 DltE Short-chain dehyd 99.7 3.7E-17 7.9E-22 94.3 9.5 81 5-86 55-135 (265)
5 KOG1200|consensus 99.7 1.1E-16 2.4E-21 88.5 9.0 78 6-84 62-139 (256)
6 PRK08415 enoyl-(acyl carrier p 99.7 1E-16 2.2E-21 93.4 9.0 76 9-85 58-137 (274)
7 PRK12481 2-deoxy-D-gluconate 3 99.7 1.4E-16 3E-21 91.7 9.4 80 5-85 54-133 (251)
8 PRK06079 enoyl-(acyl carrier p 99.7 1.2E-16 2.7E-21 91.9 8.4 77 7-84 56-136 (252)
9 PRK07791 short chain dehydroge 99.7 3.5E-16 7.5E-21 91.6 9.9 79 5-84 63-141 (286)
10 PRK07370 enoyl-(acyl carrier p 99.7 1.1E-16 2.4E-21 92.4 7.7 78 7-85 60-141 (258)
11 PRK07533 enoyl-(acyl carrier p 99.7 2.4E-16 5.3E-21 91.0 8.8 76 8-84 62-141 (258)
12 PRK06505 enoyl-(acyl carrier p 99.7 2.5E-16 5.4E-21 91.6 8.6 75 9-84 60-138 (271)
13 PRK07889 enoyl-(acyl carrier p 99.7 4.1E-16 8.8E-21 90.0 9.0 77 7-84 58-138 (256)
14 PRK08339 short chain dehydroge 99.7 8.1E-16 1.8E-20 89.1 10.2 79 5-85 57-135 (263)
15 PRK06398 aldose dehydrogenase; 99.7 1.1E-15 2.3E-20 88.3 10.2 78 7-85 45-122 (258)
16 PRK05876 short chain dehydroge 99.7 1.2E-15 2.6E-20 88.9 10.2 80 5-85 54-133 (275)
17 PRK08993 2-deoxy-D-gluconate 3 99.7 1.5E-15 3.2E-20 87.4 10.3 80 5-85 56-135 (253)
18 PRK06139 short chain dehydroge 99.7 1.6E-15 3.5E-20 90.4 10.4 80 5-85 55-134 (330)
19 PRK05867 short chain dehydroge 99.7 1.5E-15 3.2E-20 87.3 9.7 80 5-85 57-136 (253)
20 PRK07063 short chain dehydroge 99.7 1.9E-15 4.2E-20 87.1 10.2 80 5-85 57-136 (260)
21 PRK07062 short chain dehydroge 99.7 2.1E-15 4.6E-20 87.1 10.0 79 6-85 59-137 (265)
22 PRK12859 3-ketoacyl-(acyl-carr 99.7 2.3E-15 5E-20 86.8 10.1 80 5-85 67-146 (256)
23 PRK08159 enoyl-(acyl carrier p 99.7 1.1E-15 2.3E-20 89.0 8.6 76 8-84 62-141 (272)
24 PRK08594 enoyl-(acyl carrier p 99.7 1.4E-15 3.1E-20 87.8 9.0 79 5-84 58-140 (257)
25 PLN02730 enoyl-[acyl-carrier-p 99.7 1.5E-15 3.3E-20 89.6 8.7 67 18-85 104-172 (303)
26 PRK06997 enoyl-(acyl carrier p 99.7 1.1E-15 2.5E-20 88.4 8.0 75 9-84 59-138 (260)
27 PRK05872 short chain dehydroge 99.7 3.9E-15 8.5E-20 87.5 10.4 78 6-84 57-134 (296)
28 PRK08690 enoyl-(acyl carrier p 99.7 2E-15 4.3E-20 87.4 9.0 76 8-84 58-138 (261)
29 PRK06603 enoyl-(acyl carrier p 99.7 1.9E-15 4.1E-20 87.4 8.8 76 9-85 61-140 (260)
30 PRK06114 short chain dehydroge 99.6 3.3E-15 7.1E-20 86.0 9.6 80 5-85 57-136 (254)
31 PRK08589 short chain dehydroge 99.6 4.4E-15 9.6E-20 86.3 10.1 80 5-85 53-133 (272)
32 PLN00015 protochlorophyllide r 99.6 4.7E-15 1E-19 87.6 10.2 80 5-85 46-126 (308)
33 PRK07677 short chain dehydroge 99.6 7.5E-15 1.6E-19 84.4 10.3 79 5-84 49-127 (252)
34 PRK07984 enoyl-(acyl carrier p 99.6 2.5E-15 5.5E-20 87.1 8.3 76 7-83 57-137 (262)
35 PRK07478 short chain dehydroge 99.6 7.9E-15 1.7E-19 84.3 10.2 80 5-85 54-134 (254)
36 PRK08278 short chain dehydroge 99.6 7.6E-15 1.6E-19 85.4 10.2 80 5-85 61-140 (273)
37 PRK08303 short chain dehydroge 99.6 7E-15 1.5E-19 86.9 9.9 80 5-85 66-150 (305)
38 PF00106 adh_short: short chai 99.6 4.3E-15 9.2E-20 80.6 8.2 75 4-79 50-124 (167)
39 PRK07109 short chain dehydroge 99.6 9E-15 2E-19 87.3 10.3 81 4-85 55-135 (334)
40 PRK07097 gluconate 5-dehydroge 99.6 1.1E-14 2.3E-19 84.3 10.4 80 5-85 58-137 (265)
41 PRK06463 fabG 3-ketoacyl-(acyl 99.6 9E-15 2E-19 84.2 9.9 78 7-85 52-129 (255)
42 KOG0725|consensus 99.6 1.2E-14 2.5E-19 84.7 9.7 79 5-84 59-140 (270)
43 PRK06935 2-deoxy-D-gluconate 3 99.6 1.7E-14 3.6E-19 83.2 10.2 80 5-85 62-141 (258)
44 PRK06194 hypothetical protein; 99.6 1.4E-14 3.1E-19 84.5 10.0 80 5-85 54-133 (287)
45 PRK05855 short chain dehydroge 99.6 1.2E-14 2.7E-19 91.1 10.3 80 5-85 363-442 (582)
46 PRK06128 oxidoreductase; Provi 99.6 8.1E-15 1.8E-19 86.3 8.9 79 5-84 105-184 (300)
47 PRK12743 oxidoreductase; Provi 99.6 2.3E-14 5E-19 82.6 10.3 80 5-85 51-130 (256)
48 PRK06179 short chain dehydroge 99.6 1.8E-14 3.8E-19 83.5 9.9 79 6-85 45-123 (270)
49 PRK07825 short chain dehydroge 99.6 2.1E-14 4.5E-19 83.4 10.1 78 7-85 51-128 (273)
50 PRK12744 short chain dehydroge 99.6 1.5E-14 3.3E-19 83.3 9.5 79 6-85 61-139 (257)
51 PRK07792 fabG 3-ketoacyl-(acyl 99.6 1.6E-14 3.5E-19 85.3 9.7 78 5-84 61-138 (306)
52 PRK07523 gluconate 5-dehydroge 99.6 2.6E-14 5.7E-19 82.2 10.1 80 5-85 58-137 (255)
53 PRK06182 short chain dehydroge 99.6 2.1E-14 4.5E-19 83.4 9.8 78 7-85 47-124 (273)
54 PRK08643 acetoin reductase; Va 99.6 3.2E-14 6.9E-19 81.8 10.4 80 5-85 50-129 (256)
55 PRK09242 tropinone reductase; 99.6 3E-14 6.6E-19 82.0 10.1 80 5-85 59-138 (257)
56 TIGR01289 LPOR light-dependent 99.6 2.5E-14 5.4E-19 84.8 9.9 79 5-84 52-131 (314)
57 PLN02253 xanthoxin dehydrogena 99.6 3.2E-14 6.9E-19 82.8 10.2 78 6-84 66-145 (280)
58 PRK07856 short chain dehydroge 99.6 3.8E-14 8.2E-19 81.5 10.3 79 5-84 46-124 (252)
59 PRK07985 oxidoreductase; Provi 99.6 2.5E-14 5.3E-19 84.1 9.5 79 5-84 99-178 (294)
60 PRK08085 gluconate 5-dehydroge 99.6 3.9E-14 8.4E-19 81.5 10.2 80 5-85 57-136 (254)
61 PF13561 adh_short_C2: Enoyl-( 99.6 8.7E-15 1.9E-19 83.7 7.4 75 10-85 48-127 (241)
62 PRK12938 acetyacetyl-CoA reduc 99.6 4.2E-14 9.1E-19 80.9 10.2 80 5-85 52-131 (246)
63 PRK07831 short chain dehydroge 99.6 4.7E-14 1E-18 81.5 10.3 79 6-85 69-147 (262)
64 PRK08263 short chain dehydroge 99.6 4.4E-14 9.6E-19 82.1 10.2 79 6-85 49-127 (275)
65 PRK08936 glucose-1-dehydrogena 99.6 5E-14 1.1E-18 81.3 10.3 80 5-85 56-135 (261)
66 PRK08862 short chain dehydroge 99.6 6.4E-14 1.4E-18 79.8 10.6 81 5-85 53-134 (227)
67 PRK09134 short chain dehydroge 99.6 5.6E-14 1.2E-18 81.0 10.4 79 5-84 58-136 (258)
68 TIGR01832 kduD 2-deoxy-D-gluco 99.6 4.7E-14 1E-18 80.8 10.0 80 5-85 51-130 (248)
69 PRK08416 7-alpha-hydroxysteroi 99.6 3.2E-14 7E-19 82.1 9.4 80 5-85 58-143 (260)
70 PRK08063 enoyl-(acyl carrier p 99.6 5.5E-14 1.2E-18 80.5 10.3 80 5-85 53-132 (250)
71 PRK06483 dihydromonapterin red 99.6 3.8E-14 8.2E-19 80.7 9.2 77 8-85 48-124 (236)
72 PRK05717 oxidoreductase; Valid 99.6 6.8E-14 1.5E-18 80.5 10.2 78 6-84 56-135 (255)
73 PRK05650 short chain dehydroge 99.6 5E-14 1.1E-18 81.7 9.6 80 5-85 48-127 (270)
74 PRK12823 benD 1,6-dihydroxycyc 99.6 6.5E-14 1.4E-18 80.7 10.0 80 5-85 55-135 (260)
75 TIGR02415 23BDH acetoin reduct 99.6 7.1E-14 1.5E-18 80.2 10.1 80 5-85 48-127 (254)
76 PRK12384 sorbitol-6-phosphate 99.6 6.5E-14 1.4E-18 80.7 9.9 79 6-85 53-131 (259)
77 PRK12748 3-ketoacyl-(acyl-carr 99.6 7.7E-14 1.7E-18 80.3 10.2 79 5-84 66-144 (256)
78 PRK06484 short chain dehydroge 99.6 3.1E-14 6.8E-19 88.8 9.0 78 5-83 314-392 (520)
79 PRK06484 short chain dehydroge 99.6 6E-14 1.3E-18 87.6 10.2 80 5-85 50-131 (520)
80 PRK08265 short chain dehydroge 99.6 7.8E-14 1.7E-18 80.6 9.9 76 5-82 51-126 (261)
81 PRK12747 short chain dehydroge 99.6 7E-14 1.5E-18 80.3 9.5 81 5-85 53-138 (252)
82 PRK05854 short chain dehydroge 99.6 5E-14 1.1E-18 83.5 9.1 78 5-84 64-141 (313)
83 PRK08226 short chain dehydroge 99.6 1.1E-13 2.4E-18 79.8 10.4 79 5-84 53-131 (263)
84 PRK08267 short chain dehydroge 99.6 1.2E-13 2.5E-18 79.7 10.4 80 5-85 47-127 (260)
85 PRK05993 short chain dehydroge 99.6 9.9E-14 2.1E-18 80.8 10.0 79 7-85 48-126 (277)
86 PRK06300 enoyl-(acyl carrier p 99.6 4.3E-14 9.4E-19 83.4 8.5 65 20-85 105-171 (299)
87 PRK06500 short chain dehydroge 99.6 9.7E-14 2.1E-18 79.4 9.6 79 5-84 51-129 (249)
88 PRK06124 gluconate 5-dehydroge 99.6 1.4E-13 2.9E-18 79.2 10.2 80 5-85 59-138 (256)
89 PRK08220 2,3-dihydroxybenzoate 99.6 1.5E-13 3.2E-18 78.8 10.3 80 5-85 47-126 (252)
90 PRK05599 hypothetical protein; 99.6 1.1E-13 2.4E-18 79.5 9.8 77 7-84 50-126 (246)
91 PRK07576 short chain dehydroge 99.6 1.4E-13 3.1E-18 79.7 10.1 79 6-85 58-136 (264)
92 PRK12937 short chain dehydroge 99.6 9.1E-14 2E-18 79.3 9.1 79 5-84 54-132 (245)
93 PRK07024 short chain dehydroge 99.6 1.3E-13 2.9E-18 79.5 9.8 78 7-85 51-129 (257)
94 PRK12824 acetoacetyl-CoA reduc 99.5 2E-13 4.2E-18 77.9 10.4 80 5-85 51-130 (245)
95 PRK06523 short chain dehydroge 99.5 1.7E-13 3.6E-18 79.0 10.2 79 6-85 49-129 (260)
96 PRK12935 acetoacetyl-CoA reduc 99.5 1.7E-13 3.8E-18 78.4 10.2 80 5-85 55-134 (247)
97 PRK06180 short chain dehydroge 99.5 1.6E-13 3.6E-18 79.9 10.1 79 6-85 50-128 (277)
98 PRK07067 sorbitol dehydrogenas 99.5 1.8E-13 3.9E-18 78.8 10.0 78 6-84 52-129 (257)
99 KOG1610|consensus 99.5 1.1E-13 2.5E-18 81.0 9.1 82 5-86 75-158 (322)
100 PRK07069 short chain dehydroge 99.5 1.9E-13 4.1E-18 78.3 10.0 77 8-85 53-129 (251)
101 PRK07453 protochlorophyllide o 99.5 1.9E-13 4.1E-18 81.1 10.2 80 5-85 54-134 (322)
102 PRK06172 short chain dehydroge 99.5 2.3E-13 4.9E-18 78.2 10.2 80 5-85 55-135 (253)
103 PRK08251 short chain dehydroge 99.5 2.9E-13 6.2E-18 77.5 10.6 80 5-85 52-131 (248)
104 PRK07454 short chain dehydroge 99.5 2.1E-13 4.6E-18 77.8 9.9 80 5-85 54-133 (241)
105 PRK06841 short chain dehydroge 99.5 2.4E-13 5.1E-18 78.2 10.0 79 6-85 61-139 (255)
106 PRK06138 short chain dehydroge 99.5 2.7E-13 5.8E-18 77.7 10.2 80 5-85 52-131 (252)
107 PRK07832 short chain dehydroge 99.5 2.5E-13 5.4E-18 78.9 10.2 76 8-84 52-127 (272)
108 PRK05866 short chain dehydroge 99.5 2.6E-13 5.7E-18 79.8 10.3 80 5-85 88-169 (293)
109 KOG1208|consensus 99.5 7.4E-14 1.6E-18 82.7 7.9 79 4-85 84-162 (314)
110 PRK07890 short chain dehydroge 99.5 3.3E-13 7.1E-18 77.6 10.3 79 5-84 53-132 (258)
111 PRK06123 short chain dehydroge 99.5 3.1E-13 6.6E-18 77.4 10.0 79 5-84 51-130 (248)
112 PRK06171 sorbitol-6-phosphate 99.5 2.7E-13 5.9E-18 78.4 9.6 78 7-85 50-136 (266)
113 PRK12936 3-ketoacyl-(acyl-carr 99.5 3.7E-13 8E-18 76.8 10.0 78 6-84 52-129 (245)
114 PRK06482 short chain dehydroge 99.5 4.3E-13 9.2E-18 78.0 10.4 79 6-85 48-126 (276)
115 PRK08277 D-mannonate oxidoredu 99.5 3.5E-13 7.7E-18 78.4 10.0 80 5-85 58-152 (278)
116 PRK05693 short chain dehydroge 99.5 3.6E-13 7.8E-18 78.3 10.0 76 8-84 46-121 (274)
117 PRK06200 2,3-dihydroxy-2,3-dih 99.5 1.8E-13 3.9E-18 79.1 8.7 79 6-85 52-135 (263)
118 PRK07814 short chain dehydroge 99.5 4E-13 8.7E-18 77.7 10.1 79 5-84 58-136 (263)
119 PRK07666 fabG 3-ketoacyl-(acyl 99.5 4.9E-13 1.1E-17 76.3 10.2 80 5-85 55-134 (239)
120 TIGR01829 AcAcCoA_reduct aceto 99.5 5.6E-13 1.2E-17 75.9 10.3 80 5-85 49-128 (242)
121 PRK06113 7-alpha-hydroxysteroi 99.5 5.4E-13 1.2E-17 76.8 10.3 78 5-84 59-136 (255)
122 PRK06125 short chain dehydroge 99.5 4.2E-13 9.2E-18 77.4 9.8 76 5-85 56-131 (259)
123 PRK08340 glucose-1-dehydrogena 99.5 4E-13 8.7E-18 77.5 9.6 76 7-83 49-126 (259)
124 PRK09186 flagellin modificatio 99.5 5.6E-13 1.2E-17 76.6 10.0 78 7-85 56-136 (256)
125 PRK10538 malonic semialdehyde 99.5 6.7E-13 1.5E-17 76.2 10.2 79 6-85 46-125 (248)
126 TIGR03325 BphB_TodD cis-2,3-di 99.5 2.7E-13 5.9E-18 78.3 8.6 79 5-84 50-133 (262)
127 PRK12745 3-ketoacyl-(acyl-carr 99.5 6.2E-13 1.3E-17 76.4 9.8 80 5-85 51-132 (256)
128 PRK06947 glucose-1-dehydrogena 99.5 6.1E-13 1.3E-17 76.2 9.7 79 5-84 51-130 (248)
129 PRK12939 short chain dehydroge 99.5 8.7E-13 1.9E-17 75.5 10.3 79 5-84 55-133 (250)
130 PRK06701 short chain dehydroge 99.5 6.9E-13 1.5E-17 77.9 9.9 79 5-84 95-174 (290)
131 PRK06198 short chain dehydroge 99.5 8.6E-13 1.9E-17 76.0 10.0 79 5-84 55-133 (260)
132 TIGR03206 benzo_BadH 2-hydroxy 99.5 1E-12 2.2E-17 75.2 10.1 80 5-85 51-130 (250)
133 TIGR01831 fabG_rel 3-oxoacyl-( 99.5 1.2E-12 2.6E-17 74.6 10.3 76 5-81 47-122 (239)
134 PRK08213 gluconate 5-dehydroge 99.5 1.1E-12 2.5E-17 75.6 10.1 79 5-84 60-139 (259)
135 PRK06949 short chain dehydroge 99.5 9.8E-13 2.1E-17 75.7 9.8 80 5-85 57-136 (258)
136 PRK07035 short chain dehydroge 99.5 1.4E-12 3E-17 74.9 10.4 79 5-84 56-135 (252)
137 COG3967 DltE Short-chain dehyd 99.5 3.7E-13 7.9E-18 75.1 7.6 80 5-85 49-130 (245)
138 PRK06940 short chain dehydroge 99.5 8.2E-13 1.8E-17 77.0 9.2 72 5-85 48-119 (275)
139 PRK08628 short chain dehydroge 99.5 8.7E-13 1.9E-17 76.0 9.2 78 5-84 54-131 (258)
140 PRK13394 3-hydroxybutyrate deh 99.5 1.3E-12 2.7E-17 75.3 9.8 79 5-84 55-134 (262)
141 PRK07775 short chain dehydroge 99.5 1.5E-12 3.3E-17 75.8 10.2 79 5-84 58-136 (274)
142 PRK09072 short chain dehydroge 99.5 1.6E-12 3.5E-17 75.2 10.2 79 5-85 52-130 (263)
143 TIGR02685 pter_reduc_Leis pter 99.5 7E-13 1.5E-17 76.9 8.6 78 6-84 52-144 (267)
144 PRK12429 3-hydroxybutyrate deh 99.5 1.3E-12 2.9E-17 75.0 9.7 80 5-85 52-131 (258)
145 KOG1210|consensus 99.5 5.7E-13 1.2E-17 78.1 7.9 78 8-86 86-163 (331)
146 KOG4169|consensus 99.5 3.1E-13 6.8E-18 76.3 6.6 73 3-84 52-124 (261)
147 PRK06181 short chain dehydroge 99.5 1.9E-12 4.1E-17 74.8 9.9 79 5-84 49-128 (263)
148 PRK07231 fabG 3-ketoacyl-(acyl 99.5 2.3E-12 5E-17 73.8 10.1 79 6-85 53-132 (251)
149 PRK06914 short chain dehydroge 99.5 2E-12 4.3E-17 75.3 9.9 78 6-85 54-131 (280)
150 PRK08642 fabG 3-ketoacyl-(acyl 99.5 2.3E-12 4.9E-17 73.9 10.0 79 6-85 52-137 (253)
151 PRK12746 short chain dehydroge 99.5 1.8E-12 3.9E-17 74.5 9.6 79 5-84 55-139 (254)
152 PRK06197 short chain dehydroge 99.5 7.1E-13 1.5E-17 78.2 8.0 78 5-85 66-143 (306)
153 PRK07774 short chain dehydroge 99.5 2.3E-12 4.9E-17 73.9 9.8 78 6-84 55-135 (250)
154 PRK07578 short chain dehydroge 99.4 1.1E-12 2.5E-17 73.1 7.9 71 10-85 35-105 (199)
155 PRK06077 fabG 3-ketoacyl-(acyl 99.4 2.3E-12 5E-17 73.9 9.4 78 6-84 56-133 (252)
156 TIGR02632 RhaD_aldol-ADH rhamn 99.4 2.8E-12 6.1E-17 82.5 10.5 78 7-85 466-543 (676)
157 PRK05565 fabG 3-ketoacyl-(acyl 99.4 4.1E-12 8.8E-17 72.5 10.1 80 5-85 54-133 (247)
158 KOG1209|consensus 99.4 4.1E-13 8.8E-18 75.5 5.7 80 6-86 52-132 (289)
159 KOG1611|consensus 99.4 1.6E-12 3.5E-17 73.4 8.1 81 5-85 53-135 (249)
160 PRK06196 oxidoreductase; Provi 99.4 1.6E-12 3.4E-17 77.1 8.5 75 8-85 73-147 (315)
161 PRK12827 short chain dehydroge 99.4 4.5E-12 9.7E-17 72.4 10.1 79 5-84 58-137 (249)
162 PRK09135 pteridine reductase; 99.4 3.6E-12 7.9E-17 72.8 9.7 78 6-84 57-134 (249)
163 PRK09730 putative NAD(P)-bindi 99.4 4.1E-12 8.8E-17 72.6 9.8 79 5-84 50-129 (247)
164 PRK05875 short chain dehydroge 99.4 5.4E-12 1.2E-16 73.4 10.2 78 6-84 58-136 (276)
165 TIGR01500 sepiapter_red sepiap 99.4 3.8E-12 8.3E-17 73.4 9.5 79 5-84 54-139 (256)
166 COG1028 FabG Dehydrogenases wi 99.4 4E-12 8.7E-17 72.9 9.5 75 7-82 58-134 (251)
167 PRK06057 short chain dehydroge 99.4 4.6E-12 9.9E-17 73.0 9.6 76 9-85 54-131 (255)
168 PRK12825 fabG 3-ketoacyl-(acyl 99.4 7.6E-12 1.6E-16 71.3 10.4 80 5-85 55-134 (249)
169 PRK07074 short chain dehydroge 99.4 8E-12 1.7E-16 71.9 10.3 79 6-85 49-127 (257)
170 TIGR01830 3oxo_ACP_reduc 3-oxo 99.4 9.6E-12 2.1E-16 70.7 10.1 79 5-84 47-125 (239)
171 PRK09009 C factor cell-cell si 99.4 3.7E-12 7.9E-17 72.5 8.4 75 6-85 43-123 (235)
172 PRK12826 3-ketoacyl-(acyl-carr 99.4 1.1E-11 2.3E-16 71.0 10.3 79 6-85 55-133 (251)
173 PRK08217 fabG 3-ketoacyl-(acyl 99.4 1.1E-11 2.5E-16 70.9 10.4 79 5-84 53-140 (253)
174 PRK06720 hypothetical protein; 99.4 7.4E-12 1.6E-16 68.7 8.6 78 5-86 64-142 (169)
175 PRK08324 short chain dehydroge 99.4 9.3E-12 2E-16 80.2 10.2 78 7-85 471-548 (681)
176 PRK07201 short chain dehydroge 99.4 8E-12 1.7E-16 79.9 9.9 80 5-85 419-500 (657)
177 PRK07326 short chain dehydroge 99.4 1.2E-11 2.6E-16 70.4 9.6 77 6-83 54-130 (237)
178 PRK07904 short chain dehydroge 99.4 1.4E-11 3.1E-16 71.1 9.5 77 7-85 61-137 (253)
179 PRK05653 fabG 3-ketoacyl-(acyl 99.4 2.3E-11 4.9E-16 69.3 10.3 80 5-85 53-132 (246)
180 PRK08261 fabG 3-ketoacyl-(acyl 99.4 1.1E-11 2.4E-16 76.6 9.5 73 9-82 259-331 (450)
181 TIGR01963 PHB_DH 3-hydroxybuty 99.4 2.4E-11 5.1E-16 69.7 10.4 80 5-85 49-128 (255)
182 COG0623 FabI Enoyl-[acyl-carri 99.4 7.1E-12 1.5E-16 71.0 7.7 78 8-86 58-139 (259)
183 PRK12829 short chain dehydroge 99.4 2.6E-11 5.7E-16 69.9 10.2 78 7-85 59-137 (264)
184 PRK05557 fabG 3-ketoacyl-(acyl 99.4 2.9E-11 6.3E-16 69.0 10.2 79 5-84 54-132 (248)
185 PLN02780 ketoreductase/ oxidor 99.4 1.2E-11 2.5E-16 73.7 8.8 78 6-85 104-184 (320)
186 PRK08703 short chain dehydroge 99.4 2.2E-11 4.7E-16 69.6 9.5 78 7-85 57-138 (239)
187 PRK07577 short chain dehydroge 99.4 2.2E-11 4.7E-16 69.2 9.4 75 9-85 44-118 (234)
188 PRK05884 short chain dehydroge 99.3 1.4E-11 3E-16 70.0 8.2 73 8-85 46-124 (223)
189 PRK08945 putative oxoacyl-(acy 99.3 4E-11 8.6E-16 68.8 10.0 78 7-85 63-143 (247)
190 TIGR02813 omega_3_PfaA polyket 99.3 9.5E-12 2.1E-16 88.1 8.3 76 4-81 2092-2167(2582)
191 PRK12742 oxidoreductase; Provi 99.3 3.3E-11 7.2E-16 68.6 8.8 72 8-84 53-124 (237)
192 PRK07102 short chain dehydroge 99.3 5.3E-11 1.1E-15 68.1 9.6 77 5-85 50-126 (243)
193 PF08659 KR: KR domain; Inter 99.3 9E-12 1.9E-16 68.9 6.2 75 4-79 51-125 (181)
194 PRK12828 short chain dehydroge 99.3 8.4E-11 1.8E-15 66.8 9.4 77 7-84 55-131 (239)
195 PRK07023 short chain dehydroge 99.3 4.8E-11 1E-15 68.3 8.5 80 5-85 44-128 (243)
196 PRK06550 fabG 3-ketoacyl-(acyl 99.3 6.1E-11 1.3E-15 67.5 8.5 72 7-85 46-118 (235)
197 smart00822 PKS_KR This enzymat 99.3 7.2E-11 1.6E-15 64.0 8.2 73 5-78 52-124 (180)
198 PRK07041 short chain dehydroge 99.3 6.3E-11 1.4E-15 67.2 8.0 71 5-82 44-114 (230)
199 PRK06924 short chain dehydroge 99.3 7.7E-11 1.7E-15 67.6 8.4 79 5-84 47-130 (251)
200 PRK08017 oxidoreductase; Provi 99.2 2.5E-10 5.5E-15 65.6 9.8 78 7-85 46-124 (256)
201 PRK06101 short chain dehydroge 99.2 1.1E-10 2.4E-15 66.8 8.0 75 6-84 46-120 (240)
202 KOG1199|consensus 99.2 7.6E-12 1.6E-16 68.6 2.6 80 4-84 53-138 (260)
203 PRK09291 short chain dehydroge 99.2 2.5E-10 5.4E-15 65.7 9.0 74 5-85 50-123 (257)
204 PRK12367 short chain dehydroge 99.2 1.7E-10 3.7E-15 66.5 8.2 65 9-84 61-125 (245)
205 PRK08264 short chain dehydroge 99.2 4.7E-10 1E-14 63.9 9.7 75 6-85 49-124 (238)
206 PRK07060 short chain dehydroge 99.2 4.2E-10 9.2E-15 64.3 9.0 73 8-85 55-127 (245)
207 PRK06953 short chain dehydroge 99.2 3.5E-10 7.6E-15 64.1 8.1 74 8-84 46-121 (222)
208 PRK08177 short chain dehydroge 99.2 2.6E-10 5.6E-15 64.7 7.0 75 7-84 46-122 (225)
209 PRK05786 fabG 3-ketoacyl-(acyl 99.2 6.1E-10 1.3E-14 63.4 8.5 75 7-84 54-128 (238)
210 PRK12428 3-alpha-hydroxysteroi 99.1 1.4E-10 3E-15 66.6 5.6 64 9-84 26-89 (241)
211 PRK07424 bifunctional sterol d 99.1 1.4E-09 2.9E-14 66.8 9.2 68 7-85 225-292 (406)
212 KOG1207|consensus 99.1 1.4E-11 3.1E-16 67.6 0.5 75 6-85 53-127 (245)
213 PRK08219 short chain dehydroge 99.1 2.1E-09 4.6E-14 60.7 8.9 74 7-85 48-121 (227)
214 KOG1204|consensus 99.1 5.4E-10 1.2E-14 63.4 6.0 75 9-84 57-134 (253)
215 KOG1014|consensus 99.0 3.3E-10 7.2E-15 66.6 4.3 79 5-86 98-179 (312)
216 KOG1478|consensus 99.0 8.7E-10 1.9E-14 63.7 5.9 81 5-86 60-167 (341)
217 PRK07806 short chain dehydroge 99.0 6.1E-10 1.3E-14 63.8 5.3 72 6-84 56-127 (248)
218 TIGR02114 coaB_strep phosphopa 98.7 3.6E-08 7.9E-13 56.5 5.1 61 11-75 57-117 (227)
219 PRK10217 dTDP-glucose 4,6-dehy 98.3 8.5E-06 1.8E-10 49.2 7.4 65 7-81 52-116 (355)
220 PLN02572 UDP-sulfoquinovose sy 98.2 1.5E-05 3.2E-10 49.9 7.7 66 7-79 114-179 (442)
221 PLN02653 GDP-mannose 4,6-dehyd 98.2 9.7E-06 2.1E-10 48.7 6.7 68 6-83 60-127 (340)
222 PRK13656 trans-2-enoyl-CoA red 98.2 7.8E-06 1.7E-10 50.3 5.5 41 5-46 102-142 (398)
223 PRK10084 dTDP-glucose 4,6 dehy 98.2 1.3E-05 2.8E-10 48.4 6.4 66 6-81 50-115 (352)
224 PLN02989 cinnamyl-alcohol dehy 98.1 1.5E-05 3.2E-10 47.6 6.4 64 6-81 56-119 (325)
225 TIGR02622 CDP_4_6_dhtase CDP-g 98.0 4.5E-05 9.8E-10 46.1 6.9 62 7-78 53-114 (349)
226 TIGR01472 gmd GDP-mannose 4,6- 98.0 5.6E-05 1.2E-09 45.6 6.9 64 6-79 55-118 (343)
227 TIGR03589 PseB UDP-N-acetylglu 97.9 0.0001 2.2E-09 44.3 7.4 61 7-79 54-114 (324)
228 TIGR01181 dTDP_gluc_dehyt dTDP 97.9 9.4E-05 2E-09 43.7 6.5 64 7-80 51-114 (317)
229 PLN02240 UDP-glucose 4-epimera 97.8 0.00016 3.6E-09 43.5 6.7 63 6-78 58-120 (352)
230 COG1091 RfbD dTDP-4-dehydrorha 97.8 0.00021 4.5E-09 42.4 6.7 58 12-79 33-90 (281)
231 PLN02896 cinnamyl-alcohol dehy 97.7 0.00069 1.5E-08 41.1 7.8 67 6-80 58-127 (353)
232 PLN03209 translocon at the inn 97.6 0.0004 8.6E-09 45.0 6.8 59 7-79 139-197 (576)
233 TIGR01179 galE UDP-glucose-4-e 97.6 0.00048 1.1E-08 40.8 6.4 62 7-78 48-109 (328)
234 PRK10675 UDP-galactose-4-epime 97.5 0.00093 2E-08 40.1 6.8 62 7-78 51-112 (338)
235 PF08643 DUF1776: Fungal famil 97.5 0.0026 5.6E-08 38.2 8.1 78 6-83 50-141 (299)
236 COG1088 RfbB dTDP-D-glucose 4, 97.5 0.0011 2.4E-08 39.9 6.5 69 4-82 49-117 (340)
237 PF01073 3Beta_HSD: 3-beta hyd 97.4 0.00098 2.1E-08 39.5 5.8 57 10-79 49-105 (280)
238 PF02719 Polysacc_synt_2: Poly 97.4 0.00029 6.4E-09 42.0 3.5 62 9-80 57-118 (293)
239 PLN00198 anthocyanidin reducta 97.3 0.002 4.3E-08 38.9 6.7 60 7-79 60-119 (338)
240 PLN02214 cinnamoyl-CoA reducta 97.3 0.0015 3.2E-08 39.7 6.0 56 7-79 61-116 (342)
241 PLN02986 cinnamyl-alcohol dehy 97.2 0.0021 4.5E-08 38.5 6.1 60 7-79 57-116 (322)
242 PF04321 RmlD_sub_bind: RmlD s 97.1 0.0018 3.8E-08 38.5 5.0 58 12-79 34-91 (286)
243 PLN02778 3,5-epimerase/4-reduc 97.1 0.0037 8.1E-08 37.3 6.4 69 4-79 32-100 (298)
244 PF01370 Epimerase: NAD depend 97.0 0.0051 1.1E-07 34.9 6.2 63 7-79 43-105 (236)
245 PLN02650 dihydroflavonol-4-red 97.0 0.0045 9.7E-08 37.6 6.1 61 7-80 57-117 (351)
246 PRK09987 dTDP-4-dehydrorhamnos 97.0 0.0042 9.1E-08 37.0 5.9 58 12-79 37-94 (299)
247 PLN02260 probable rhamnose bio 97.0 0.004 8.7E-08 41.0 6.3 67 6-79 405-471 (668)
248 COG1086 Predicted nucleoside-d 97.0 0.004 8.6E-08 40.4 5.8 64 6-79 302-365 (588)
249 PRK06732 phosphopantothenate-- 97.0 0.0017 3.8E-08 37.5 3.9 47 22-69 69-115 (229)
250 PLN02662 cinnamyl-alcohol dehy 96.9 0.0058 1.3E-07 36.5 6.0 60 7-79 56-115 (322)
251 TIGR02197 heptose_epim ADP-L-g 96.8 0.0081 1.8E-07 35.7 6.2 59 11-79 46-104 (314)
252 PLN02725 GDP-4-keto-6-deoxyman 96.7 0.0073 1.6E-07 35.7 5.3 60 11-79 31-90 (306)
253 TIGR01214 rmlD dTDP-4-dehydror 96.7 0.01 2.2E-07 34.8 5.9 57 12-78 33-89 (287)
254 PLN02583 cinnamoyl-CoA reducta 96.7 0.013 2.9E-07 34.8 6.3 62 6-81 57-118 (297)
255 PRK08309 short chain dehydroge 96.6 0.01 2.2E-07 33.0 5.0 40 6-46 47-86 (177)
256 KOG1371|consensus 96.6 0.01 2.2E-07 36.2 5.2 65 4-78 52-116 (343)
257 PLN02260 probable rhamnose bio 96.5 0.025 5.5E-07 37.4 7.2 63 6-78 57-119 (668)
258 TIGR03466 HpnA hopanoid-associ 96.5 0.02 4.4E-07 34.1 6.2 59 7-79 44-102 (328)
259 PLN02657 3,8-divinyl protochlo 96.4 0.022 4.8E-07 35.4 6.2 60 6-78 111-170 (390)
260 PRK11150 rfaD ADP-L-glycero-D- 96.3 0.023 5.1E-07 33.8 5.7 61 12-79 44-106 (308)
261 COG1087 GalE UDP-glucose 4-epi 96.2 0.036 7.8E-07 33.7 5.9 61 8-78 46-106 (329)
262 PRK15181 Vi polysaccharide bio 96.1 0.047 1E-06 33.3 6.6 61 7-79 70-130 (348)
263 PLN02427 UDP-apiose/xylose syn 96.1 0.054 1.2E-06 33.4 6.6 60 7-78 66-125 (386)
264 PF07993 NAD_binding_4: Male s 95.5 0.031 6.7E-07 32.5 3.9 63 5-78 59-123 (249)
265 PLN02503 fatty acyl-CoA reduct 95.0 0.2 4.3E-06 33.3 6.6 63 6-79 192-256 (605)
266 PRK05865 hypothetical protein; 94.9 0.17 3.7E-06 34.9 6.3 51 7-78 41-91 (854)
267 PRK11908 NAD-dependent epimera 94.8 0.27 5.8E-06 29.9 6.6 61 7-79 47-108 (347)
268 PLN02996 fatty acyl-CoA reduct 94.8 0.25 5.4E-06 31.9 6.7 62 6-79 84-149 (491)
269 TIGR01746 Thioester-redct thio 94.3 0.33 7.3E-06 29.3 6.2 63 6-79 61-125 (367)
270 PRK05579 bifunctional phosphop 94.2 0.14 3.1E-06 32.2 4.5 36 11-50 247-282 (399)
271 KOG1502|consensus 94.2 0.42 9.1E-06 29.4 6.2 62 5-79 56-117 (327)
272 COG0451 WcaG Nucleoside-diphos 94.1 0.25 5.3E-06 29.3 5.2 62 7-79 43-105 (314)
273 PRK08125 bifunctional UDP-gluc 94.1 0.35 7.5E-06 32.3 6.2 62 7-79 361-422 (660)
274 PLN02695 GDP-D-mannose-3',5'-e 93.9 0.63 1.4E-05 28.8 6.8 60 8-78 66-125 (370)
275 PLN00141 Tic62-NAD(P)-related 93.3 0.54 1.2E-05 27.3 5.6 57 7-78 63-120 (251)
276 PF12241 Enoyl_reductase: Tran 92.7 0.47 1E-05 27.7 4.6 40 4-44 21-60 (237)
277 PRK07201 short chain dehydroge 92.6 0.33 7.3E-06 32.0 4.4 62 6-79 51-114 (657)
278 KOG1221|consensus 92.5 0.29 6.3E-06 31.5 3.9 67 6-81 79-145 (467)
279 PLN02686 cinnamoyl-CoA reducta 92.2 1.3 2.8E-05 27.5 6.4 32 7-46 108-139 (367)
280 CHL00194 ycf39 Ycf39; Provisio 92.2 0.62 1.3E-05 28.1 5.0 55 7-78 44-98 (317)
281 COG1089 Gmd GDP-D-mannose dehy 92.2 0.41 8.9E-06 29.2 4.0 63 6-78 55-117 (345)
282 TIGR00521 coaBC_dfp phosphopan 90.4 0.67 1.5E-05 29.2 4.0 37 11-51 244-281 (390)
283 TIGR01777 yfcH conserved hypot 90.3 1.2 2.6E-05 26.1 4.9 46 30-78 53-98 (292)
284 KOG4022|consensus 89.2 2.7 5.8E-05 23.8 6.3 66 19-84 55-122 (236)
285 KOG1431|consensus 86.5 1.9 4E-05 25.8 3.8 49 12-66 38-87 (315)
286 COG1897 MetA Homoserine trans- 86.3 5 0.00011 24.3 5.4 54 23-79 90-147 (307)
287 PLN02206 UDP-glucuronate decar 85.9 4.2 9.1E-05 26.1 5.5 41 35-79 183-223 (442)
288 KOG1430|consensus 84.4 3.2 6.8E-05 26.1 4.3 61 5-78 54-114 (361)
289 KOG1202|consensus 83.0 0.71 1.5E-05 33.8 1.2 73 4-78 1819-1891(2376)
290 TIGR01001 metA homoserine O-su 82.5 9.1 0.0002 23.6 7.0 64 18-81 82-149 (300)
291 PLN02166 dTDP-glucose 4,6-dehy 81.6 4.6 9.9E-05 25.9 4.4 41 35-79 184-224 (436)
292 PF13460 NAD_binding_10: NADH( 80.0 6.7 0.00015 21.4 4.3 33 6-46 39-71 (183)
293 PF03435 Saccharop_dh: Sacchar 79.7 3.9 8.5E-05 25.5 3.6 35 4-46 44-78 (386)
294 COG3320 Putative dehydrogenase 79.4 3.7 8E-05 26.0 3.3 63 4-78 58-123 (382)
295 COG1058 CinA Predicted nucleot 79.0 12 0.00025 22.6 6.3 58 5-68 34-91 (255)
296 TIGR03443 alpha_am_amid L-amin 75.5 7.7 0.00017 28.4 4.4 61 7-78 1035-1097(1389)
297 KOG0092|consensus 73.7 15 0.00032 21.3 4.4 40 5-45 77-118 (200)
298 cd00885 cinA Competence-damage 73.6 13 0.00029 20.7 6.6 59 5-69 32-90 (170)
299 PF04127 DFP: DNA / pantothena 72.4 6.2 0.00013 22.4 2.8 30 20-50 68-97 (185)
300 PRK12320 hypothetical protein; 70.9 28 0.0006 24.2 5.9 51 7-78 41-91 (699)
301 KOG2733|consensus 70.4 11 0.00023 24.1 3.7 30 10-47 66-95 (423)
302 PRK01215 competence damage-ind 69.9 22 0.00047 21.5 5.7 56 5-66 36-91 (264)
303 PF08883 DOPA_dioxygen: Dopa 4 69.7 14 0.0003 19.1 3.6 32 10-43 47-78 (104)
304 KOG1344|consensus 68.0 12 0.00026 22.5 3.4 25 20-46 235-259 (324)
305 PF03753 HHV6-IE: Human herpes 67.4 2.4 5.2E-05 28.6 0.6 36 36-71 44-81 (993)
306 PF06569 DUF1128: Protein of u 65.0 13 0.00029 17.8 2.7 42 17-64 5-46 (71)
307 PF02515 CoA_transf_3: CoA-tra 62.6 21 0.00046 20.1 3.7 29 11-44 1-29 (191)
308 PLN00106 malate dehydrogenase 62.5 25 0.00053 21.9 4.2 42 30-78 82-123 (323)
309 COG3007 Uncharacterized paraqu 62.3 21 0.00045 22.4 3.7 37 7-44 104-140 (398)
310 PF01220 DHquinase_II: Dehydro 60.9 9.6 0.00021 20.8 2.0 35 6-46 43-77 (140)
311 cd00458 SugarP_isomerase Sugar 60.7 27 0.00058 19.3 4.0 37 8-45 88-124 (169)
312 COG0293 FtsJ 23S rRNA methylas 59.6 11 0.00025 21.8 2.3 35 6-43 85-119 (205)
313 cd00466 DHQase_II Dehydroquina 59.5 9.3 0.0002 20.8 1.8 36 5-46 41-76 (140)
314 PRK05395 3-dehydroquinate dehy 57.4 16 0.00034 20.1 2.5 35 6-46 44-78 (146)
315 PF14195 DUF4316: Domain of un 56.7 9.3 0.0002 18.2 1.4 17 25-42 9-25 (70)
316 COG4840 Uncharacterized protei 55.5 22 0.00049 16.8 3.3 43 16-64 4-46 (71)
317 PF04204 HTS: Homoserine O-suc 55.3 6 0.00013 24.3 0.8 59 19-77 82-144 (298)
318 PRK13015 3-dehydroquinate dehy 55.3 11 0.00025 20.6 1.7 24 22-46 55-78 (146)
319 TIGR01088 aroQ 3-dehydroquinat 53.9 20 0.00042 19.6 2.5 36 6-47 42-77 (141)
320 PF07845 DUF1636: Protein of u 53.6 16 0.00035 19.2 2.1 36 4-40 62-97 (116)
321 PRK03670 competence damage-ind 53.4 48 0.001 19.9 6.3 57 5-66 33-89 (252)
322 COG2453 CDC14 Predicted protei 53.3 36 0.00079 19.0 3.6 36 13-48 81-118 (180)
323 PRK09620 hypothetical protein; 52.1 12 0.00027 21.9 1.7 16 35-50 87-102 (229)
324 PRK00549 competence damage-ind 51.5 64 0.0014 20.9 6.1 53 5-63 33-85 (414)
325 KOG4589|consensus 51.4 15 0.00033 21.4 1.9 33 6-41 109-142 (232)
326 KOG1099|consensus 51.1 54 0.0012 19.9 5.7 45 6-55 89-134 (294)
327 cd01842 SGNH_hydrolase_like_5 50.6 34 0.00073 19.6 3.1 40 35-78 50-89 (183)
328 PF01729 QRPTase_C: Quinolinat 49.9 44 0.00095 18.7 3.5 37 7-46 100-136 (169)
329 PF03461 TRCF: TRCF domain; I 49.7 25 0.00055 17.7 2.4 20 14-33 28-47 (101)
330 PRK03673 hypothetical protein; 49.7 69 0.0015 20.7 6.2 39 5-47 34-72 (396)
331 TIGR00200 cinA_nterm competenc 49.5 71 0.0015 20.8 6.1 38 5-46 33-70 (413)
332 PRK11188 rrmJ 23S rRNA methylt 49.2 33 0.00073 19.7 3.1 36 7-45 92-127 (209)
333 PF06962 rRNA_methylase: Putat 48.4 6 0.00013 21.5 0.0 15 35-49 46-60 (140)
334 COG0282 ackA Acetate kinase [E 47.8 36 0.00078 22.0 3.2 26 24-50 309-334 (396)
335 cd00758 MoCF_BD MoCF_BD: molyb 47.7 42 0.00092 17.7 5.4 54 4-63 31-84 (133)
336 PF00479 G6PD_N: Glucose-6-pho 47.6 50 0.0011 18.7 3.6 26 6-31 72-97 (183)
337 TIGR03649 ergot_EASG ergot alk 47.3 20 0.00044 21.2 2.1 35 8-44 41-76 (285)
338 COG4232 Thiol:disulfide interc 46.9 88 0.0019 21.4 5.0 57 6-64 507-565 (569)
339 PF02601 Exonuc_VII_L: Exonucl 46.7 67 0.0015 19.7 5.7 51 6-57 42-97 (319)
340 COG0281 SfcA Malic enzyme [Ene 45.6 44 0.00096 21.9 3.4 34 4-38 114-147 (432)
341 COG3959 Transketolase, N-termi 44.6 60 0.0013 19.5 3.6 34 9-43 207-240 (243)
342 TIGR00177 molyb_syn molybdenum 44.3 51 0.0011 17.7 5.3 53 5-63 40-92 (144)
343 COG1748 LYS9 Saccharopine dehy 42.9 44 0.00095 21.5 3.1 33 6-46 47-79 (389)
344 PF13348 Y_phosphatase3C: Tyro 41.8 30 0.00064 15.8 1.8 21 17-38 27-47 (68)
345 PRK06498 isocitrate lyase; Pro 41.4 1.1E+02 0.0024 20.7 5.0 42 3-45 343-384 (531)
346 KOG3923|consensus 41.1 26 0.00056 22.0 1.9 14 35-48 183-196 (342)
347 PF01233 NMT: Myristoyl-CoA:pr 41.0 67 0.0015 18.1 3.9 28 6-33 22-49 (162)
348 PF10649 DUF2478: Protein of u 40.9 66 0.0014 18.0 3.5 27 17-43 75-101 (159)
349 PRK03620 5-dehydro-4-deoxygluc 40.6 86 0.0019 19.2 5.4 43 17-65 26-68 (303)
350 cd00953 KDG_aldolase KDG (2-ke 40.6 83 0.0018 19.0 5.4 43 17-65 18-60 (279)
351 PTZ00325 malate dehydrogenase; 39.6 95 0.0021 19.4 5.0 40 31-77 73-112 (321)
352 KOG0094|consensus 38.9 84 0.0018 18.6 4.3 40 5-45 94-136 (221)
353 cd00951 KDGDH 5-dehydro-4-deox 38.8 91 0.002 18.9 5.4 43 17-65 19-61 (289)
354 TIGR03249 KdgD 5-dehydro-4-deo 38.7 92 0.002 19.0 5.4 43 17-65 24-66 (296)
355 COG0505 CarA Carbamoylphosphat 37.8 86 0.0019 20.2 3.7 31 35-66 220-250 (368)
356 cd06399 PB1_P40 The PB1 domain 37.6 58 0.0013 16.4 2.9 53 9-63 18-70 (92)
357 PRK07058 acetate kinase; Provi 37.2 75 0.0016 20.7 3.5 20 28-48 312-331 (396)
358 PF14307 Glyco_tran_WbsX: Glyc 37.1 89 0.0019 19.6 3.8 28 13-43 52-79 (345)
359 PRK12440 acetate kinase; Revie 37.0 72 0.0016 20.7 3.4 21 28-49 314-334 (397)
360 TIGR02667 moaB_proteo molybden 36.9 77 0.0017 17.5 6.4 55 5-63 35-89 (163)
361 PRK12397 propionate kinase; Re 35.4 77 0.0017 20.7 3.4 18 31-49 318-335 (404)
362 COG3310 Uncharacterized protei 35.2 88 0.0019 17.7 4.0 60 14-75 90-149 (196)
363 PF07209 DUF1415: Protein of u 35.2 90 0.0019 17.8 3.8 42 35-76 98-139 (174)
364 PF15513 DUF4651: Domain of un 35.0 54 0.0012 15.3 3.0 25 19-44 5-29 (62)
365 TIGR01758 MDH_euk_cyt malate d 34.7 1.2E+02 0.0025 19.0 4.5 44 30-84 71-114 (324)
366 KOG0747|consensus 34.7 34 0.00075 21.3 1.7 65 4-78 55-119 (331)
367 TIGR02320 PEP_mutase phosphoen 33.8 1.1E+02 0.0024 18.8 3.8 35 4-39 181-215 (285)
368 cd00952 CHBPH_aldolase Trans-o 33.7 1.2E+02 0.0026 18.7 5.3 43 17-65 27-69 (309)
369 PRK12379 propionate/acetate ki 33.5 93 0.002 20.2 3.5 20 29-49 312-331 (396)
370 PF09419 PGP_phosphatase: Mito 32.8 92 0.002 17.5 3.1 27 19-46 62-90 (168)
371 cd00950 DHDPS Dihydrodipicolin 32.7 1.1E+02 0.0025 18.3 5.3 43 17-65 19-61 (284)
372 COG2441 Predicted butyrate kin 32.5 73 0.0016 20.0 2.8 39 17-56 36-75 (374)
373 PRK09417 mogA molybdenum cofac 32.0 1.1E+02 0.0023 17.7 5.4 51 16-70 49-99 (193)
374 COG4755 Uncharacterized protei 31.6 18 0.00039 19.5 0.2 31 9-41 98-128 (151)
375 PF00701 DHDPS: Dihydrodipicol 30.6 1.3E+02 0.0028 18.2 5.6 43 17-65 20-62 (289)
376 cd03522 MoeA_like MoeA_like. T 30.6 1.4E+02 0.003 18.7 4.4 40 5-47 192-231 (312)
377 PTZ00285 glucosamine-6-phospha 30.4 1.2E+02 0.0027 18.0 4.2 40 7-47 103-142 (253)
378 PRK03170 dihydrodipicolinate s 30.0 1.3E+02 0.0029 18.2 5.4 42 17-64 20-61 (292)
379 PF14355 Abi_C: Abortive infec 30.0 73 0.0016 15.2 2.3 29 19-48 22-50 (80)
380 COG0289 DapB Dihydrodipicolina 29.9 47 0.001 20.3 1.8 33 12-47 73-105 (266)
381 TIGR00674 dapA dihydrodipicoli 29.6 1.3E+02 0.0029 18.1 5.3 43 17-65 17-59 (285)
382 COG0329 DapA Dihydrodipicolina 29.3 1.4E+02 0.0031 18.4 5.3 44 16-65 22-65 (299)
383 PF11965 DUF3479: Domain of un 29.0 1E+02 0.0022 17.3 2.9 38 8-46 3-41 (164)
384 PRK09461 ansA cytoplasmic aspa 28.9 1.2E+02 0.0027 19.0 3.5 28 17-45 64-91 (335)
385 TIGR00502 nagB glucosamine-6-p 28.8 1.3E+02 0.0029 17.9 4.3 37 8-45 104-140 (259)
386 TIGR02313 HpaI-NOT-DapA 2,4-di 28.5 1.5E+02 0.0032 18.2 5.4 43 17-65 19-61 (294)
387 TIGR03811 tyr_de_CO2_Ent tyros 28.5 2.1E+02 0.0045 19.9 4.6 47 7-54 248-297 (608)
388 PF01113 DapB_N: Dihydrodipico 28.3 97 0.0021 16.1 3.6 32 11-45 70-101 (124)
389 PHA02046 hypothetical protein 28.1 93 0.002 15.8 2.4 21 11-31 52-72 (99)
390 PRK00180 acetate kinase A/prop 28.0 1.2E+02 0.0027 19.7 3.4 16 31-47 319-335 (402)
391 KOG2865|consensus 27.9 82 0.0018 19.9 2.5 36 5-48 108-143 (391)
392 PRK05398 formyl-coenzyme A tra 27.7 1.7E+02 0.0036 19.0 4.0 31 8-43 67-97 (416)
393 PRK03604 moaC bifunctional mol 27.7 1.6E+02 0.0035 18.4 4.7 60 5-69 188-247 (312)
394 smart00852 MoCF_biosynth Proba 27.7 1E+02 0.0022 16.1 5.8 42 16-63 42-83 (135)
395 PF00478 IMPDH: IMP dehydrogen 27.0 1.5E+02 0.0033 19.0 3.6 33 10-43 123-157 (352)
396 PF13684 Dak1_2: Dihydroxyacet 27.0 1.6E+02 0.0036 18.3 4.7 37 8-45 267-303 (313)
397 PRK11709 putative L-ascorbate 27.0 1.7E+02 0.0038 18.6 4.9 50 7-62 220-269 (355)
398 PLN02417 dihydrodipicolinate s 26.9 1.5E+02 0.0033 17.9 5.3 43 17-65 20-62 (280)
399 PF05368 NmrA: NmrA-like famil 26.7 1.3E+02 0.0029 17.1 3.4 30 8-45 45-74 (233)
400 PF14069 SpoVIF: Stage VI spor 26.6 92 0.002 15.3 2.8 22 12-33 24-45 (79)
401 PF15024 Glyco_transf_18: Glyc 26.4 1.2E+02 0.0026 20.8 3.2 26 6-31 405-430 (559)
402 cd00408 DHDPS-like Dihydrodipi 26.2 1.5E+02 0.0033 17.7 5.4 42 17-64 16-57 (281)
403 TIGR03253 oxalate_frc formyl-C 26.2 1.8E+02 0.004 18.8 4.0 31 8-43 66-96 (415)
404 KOG3148|consensus 25.9 1.5E+02 0.0032 17.4 4.0 39 6-45 102-140 (273)
405 TIGR03599 YloV DAK2 domain fus 25.7 2.2E+02 0.0048 19.4 4.9 39 7-46 483-521 (530)
406 COG5583 Uncharacterized small 25.5 56 0.0012 14.7 1.2 23 20-45 13-35 (54)
407 cd04172 Rnd3_RhoE_Rho8 Rnd3/Rh 25.2 1.3E+02 0.0029 16.7 3.8 23 5-27 76-98 (182)
408 PRK03525 crotonobetainyl-CoA:c 25.1 1.8E+02 0.004 18.8 3.8 31 7-42 65-95 (405)
409 PLN02775 Probable dihydrodipic 24.7 57 0.0012 20.1 1.5 33 11-46 83-115 (286)
410 PF08952 DUF1866: Domain of un 24.6 26 0.00057 19.3 0.1 23 18-41 9-31 (146)
411 PF12359 DUF3645: Protein of u 24.4 52 0.0011 13.3 0.9 11 30-41 22-32 (34)
412 PRK04147 N-acetylneuraminate l 24.0 1.8E+02 0.0039 17.7 5.2 44 17-65 22-65 (293)
413 PRK11430 putative CoA-transfer 23.9 2.1E+02 0.0045 18.4 4.0 32 7-43 70-101 (381)
414 cd01336 MDH_cytoplasmic_cytoso 23.8 1.9E+02 0.0042 18.0 5.4 18 29-47 73-90 (325)
415 cd04131 Rnd Rnd subfamily. Th 23.8 1.4E+02 0.0031 16.4 3.7 23 5-27 72-94 (178)
416 PF09876 DUF2103: Predicted me 23.3 1.2E+02 0.0027 15.7 3.0 23 9-31 80-102 (103)
417 KOG3798|consensus 23.2 2E+02 0.0043 17.9 3.9 50 8-61 232-284 (343)
418 TIGR00519 asnASE_I L-asparagin 23.0 1.8E+02 0.0039 18.3 3.4 28 17-45 60-87 (336)
419 COG1570 XseA Exonuclease VII, 23.0 2.4E+02 0.0052 18.8 4.9 53 6-59 163-217 (440)
420 COG4981 Enoyl reductase domain 22.9 1.1E+02 0.0024 21.2 2.6 25 22-47 111-135 (717)
421 TIGR00683 nanA N-acetylneurami 22.6 1.9E+02 0.0042 17.6 5.3 44 17-65 19-62 (290)
422 cd03131 GATase1_HTS Type 1 glu 22.6 1.6E+02 0.0035 16.7 6.4 44 35-78 62-109 (175)
423 PRK07157 acetate kinase; Provi 22.4 1.9E+02 0.0041 19.0 3.4 18 32-49 317-334 (400)
424 PRK12548 shikimate 5-dehydroge 22.4 1E+02 0.0022 18.8 2.3 11 35-45 199-209 (289)
425 PF00282 Pyridoxal_deC: Pyrido 22.4 1.6E+02 0.0034 18.8 3.2 46 7-53 164-212 (373)
426 PF00871 Acetate_kinase: Aceto 22.3 1.2E+02 0.0025 19.7 2.6 20 28-48 313-333 (388)
427 KOG1494|consensus 22.3 2.2E+02 0.0047 18.1 5.0 45 27-78 89-133 (345)
428 COG4778 PhnL ABC-type phosphon 22.2 1.3E+02 0.0028 17.6 2.5 30 11-41 181-210 (235)
429 COG1325 Predicted exosome subu 22.2 1.6E+02 0.0034 16.4 3.4 31 3-33 49-79 (149)
430 PLN02590 probable tyrosine dec 22.1 2.7E+02 0.0058 19.0 4.4 45 7-52 255-304 (539)
431 PF13277 YmdB: YmdB-like prote 22.0 97 0.0021 18.8 2.1 23 19-43 13-35 (253)
432 KOG2743|consensus 21.8 1.5E+02 0.0034 18.9 2.9 40 11-53 124-164 (391)
433 PLN02263 serine decarboxylase 21.7 1.9E+02 0.0041 19.4 3.4 46 7-53 201-246 (470)
434 cd00886 MogA_MoaB MogA_MoaB fa 21.3 1.6E+02 0.0034 16.0 5.7 55 5-63 33-87 (152)
435 PRK00286 xseA exodeoxyribonucl 21.3 2.5E+02 0.0053 18.3 5.4 52 6-57 163-214 (438)
436 PF07875 Coat_F: Coat F domain 21.3 1E+02 0.0022 13.9 3.9 35 53-87 26-60 (64)
437 PRK13982 bifunctional SbtC-lik 21.2 1.5E+02 0.0032 19.9 2.9 28 20-49 321-348 (475)
438 PF11688 DUF3285: Protein of u 21.2 93 0.002 13.4 2.0 14 73-86 7-20 (45)
439 KOG1372|consensus 21.2 1.2E+02 0.0026 18.8 2.3 38 5-48 82-119 (376)
440 PF00107 ADH_zinc_N: Zinc-bind 21.0 1.3E+02 0.0029 15.1 2.5 22 24-45 46-68 (130)
441 TIGR03439 methyl_EasF probable 20.8 1.6E+02 0.0036 18.4 3.0 31 6-38 103-134 (319)
442 COG1379 PHP family phosphoeste 20.8 68 0.0015 20.5 1.3 24 19-42 321-344 (403)
443 COG0757 AroQ 3-dehydroquinate 20.4 1E+02 0.0022 17.0 1.8 23 22-45 54-77 (146)
444 PF05347 Complex1_LYR: Complex 20.4 1E+02 0.0022 13.4 2.6 18 14-31 39-56 (59)
445 PF00456 Transketolase_N: Tran 20.2 2.4E+02 0.0053 17.8 4.8 30 13-43 213-242 (332)
No 1
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.83 E-value=1e-19 Score=103.02 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=75.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
..+....+|++|.+++.++++.+.++++ ++|+||||||.....++.+.+.++|+.++++|++|.++.+++++|.|.+++
T Consensus 53 ~~~~~~~~DVtD~~~~~~~i~~~~~~~g-~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~ 131 (246)
T COG4221 53 GAALALALDVTDRAAVEAAIEALPEEFG-RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK 131 (246)
T ss_pred CceEEEeeccCCHHHHHHHHHHHHHhhC-cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC
Confidence 4688899999999999999999999999 999999999998779999999999999999999999999999999999885
Q ss_pred C
Q psy346 86 H 86 (87)
Q Consensus 86 ~ 86 (87)
.
T Consensus 132 ~ 132 (246)
T COG4221 132 S 132 (246)
T ss_pred C
Confidence 3
No 2
>KOG1205|consensus
Probab=99.82 E-value=1.6e-19 Score=104.76 Aligned_cols=78 Identities=23% Similarity=0.200 Sum_probs=73.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++++++||++|++++.++++++.+.+| ++|+||||||+.........+.+++..+|++|++|+++++|+++|+|++++
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg-~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~ 141 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFG-RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN 141 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcC-CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC
Confidence 589999999999999999999999999 999999999998777778888999999999999999999999999999985
No 3
>KOG1201|consensus
Probab=99.81 E-value=6.5e-19 Score=102.08 Aligned_cols=78 Identities=22% Similarity=0.247 Sum_probs=74.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+++.+.||+++.+++.+..++++++.| +++++|||||+....++.+.+.+++++++++|+.|++..+|+++|.|.+..
T Consensus 87 ~~~~y~cdis~~eei~~~a~~Vk~e~G-~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~ 164 (300)
T KOG1201|consen 87 EAKAYTCDISDREEIYRLAKKVKKEVG-DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN 164 (300)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcC-CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC
Confidence 789999999999999999999999999 999999999999888899999999999999999999999999999998853
No 4
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.74 E-value=3.7e-17 Score=94.34 Aligned_cols=81 Identities=22% Similarity=0.286 Sum_probs=76.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+.++++|+++++++.++.+++.+..+ .+|+||||||....+++.+.+.++.++++++|+.+++.++++++|.|.++
T Consensus 55 ~v~v~vi~~DLs~~~~~~~l~~~l~~~~~-~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~ 133 (265)
T COG0300 55 GVEVEVIPADLSDPEALERLEDELKERGG-PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER 133 (265)
T ss_pred CceEEEEECcCCChhHHHHHHHHHHhcCC-cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56788999999999999999999999888 99999999999988999999999999999999999999999999999997
Q ss_pred CC
Q psy346 85 GH 86 (87)
Q Consensus 85 ~~ 86 (87)
++
T Consensus 134 ~~ 135 (265)
T COG0300 134 GA 135 (265)
T ss_pred CC
Confidence 54
No 5
>KOG1200|consensus
Probab=99.72 E-value=1.1e-16 Score=88.48 Aligned_cols=78 Identities=29% Similarity=0.486 Sum_probs=72.9
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+....+.||++++.+++..+++..+.+| +++++|||||+..+..+..+..++|+.++.+|+.|.|..+|++.+.|...
T Consensus 62 ~~h~aF~~DVS~a~~v~~~l~e~~k~~g-~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~ 139 (256)
T KOG1200|consen 62 GDHSAFSCDVSKAHDVQNTLEEMEKSLG-TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMN 139 (256)
T ss_pred CccceeeeccCcHHHHHHHHHHHHHhcC-CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHh
Confidence 5677899999999999999999999999 99999999999999999999999999999999999999999999886443
No 6
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.72 E-value=1e-16 Score=93.40 Aligned_cols=76 Identities=12% Similarity=0.187 Sum_probs=68.8
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+++|++|++++.++++.+.+.+| ++|++|||||+... .++.+.+.++|++++++|+.+++.++++++|.|.++
T Consensus 58 ~~~~~Dv~d~~~v~~~~~~i~~~~g-~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~ 136 (274)
T PRK08415 58 YVYELDVSKPEHFKSLAESLKKDLG-KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG 136 (274)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC
Confidence 5689999999999999999999999 99999999998542 567788999999999999999999999999999764
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
|
T Consensus 137 g 137 (274)
T PRK08415 137 A 137 (274)
T ss_pred C
Confidence 3
No 7
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.72 E-value=1.4e-16 Score=91.66 Aligned_cols=80 Identities=24% Similarity=0.309 Sum_probs=73.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.+| ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.++
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 54 GRKFHFITADLIQQKDIDSIVSQAVEVMG-HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 45678899999999999999999999999 99999999998777778889999999999999999999999999999875
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 133 ~ 133 (251)
T PRK12481 133 G 133 (251)
T ss_pred C
Confidence 3
No 8
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=1.2e-16 Score=91.91 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=69.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+..+++|++++++++++++.+.+.+| ++|++|||||...+ .++.+.+.++|+..+++|+.+++.+++++.|+|.
T Consensus 56 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 56 EDLLVECDVASDESIERAFATIKERVG-KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred ceeEEeCCCCCHHHHHHHHHHHHHHhC-CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 567899999999999999999999999 99999999998643 5677889999999999999999999999999986
Q ss_pred hc
Q psy346 83 DF 84 (87)
Q Consensus 83 ~~ 84 (87)
+.
T Consensus 135 ~~ 136 (252)
T PRK06079 135 PG 136 (252)
T ss_pred cC
Confidence 54
No 9
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.5e-16 Score=91.55 Aligned_cols=79 Identities=24% Similarity=0.236 Sum_probs=72.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.+| ++|++|||||+....++.+.+.++|++++++|+.+++.+++++.|.|.++
T Consensus 63 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 141 (286)
T PRK07791 63 GGEAVANGDDIADWDGAANLVDAAVETFG-GLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAE 141 (286)
T ss_pred CCceEEEeCCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999999 99999999998766778899999999999999999999999999999764
No 10
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.70 E-value=1.1e-16 Score=92.40 Aligned_cols=78 Identities=21% Similarity=0.353 Sum_probs=70.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+.++++|+++++++.++++.+.+.+| ++|++|||+|.... .++.+.+.++|++++++|+.+++.+++++.|.|.
T Consensus 60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g-~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~ 138 (258)
T PRK07370 60 PSLFLPCDVQDDAQIEETFETIKQKWG-KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMS 138 (258)
T ss_pred cceEeecCcCCHHHHHHHHHHHHHHcC-CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHh
Confidence 466889999999999999999999999 99999999997532 5678889999999999999999999999999997
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+.|
T Consensus 139 ~~g 141 (258)
T PRK07370 139 EGG 141 (258)
T ss_pred hCC
Confidence 643
No 11
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.70 E-value=2.4e-16 Score=90.96 Aligned_cols=76 Identities=16% Similarity=0.260 Sum_probs=68.3
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+.+|++++++++++++.+.+.+| ++|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|.|.+
T Consensus 62 ~~~~~~D~~~~~~v~~~~~~~~~~~g-~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~ 140 (258)
T PRK07533 62 PIFLPLDVREPGQLEAVFARIAEEWG-RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN 140 (258)
T ss_pred ceEEecCcCCHHHHHHHHHHHHHHcC-CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence 45789999999999999999999999 99999999998542 46778899999999999999999999999999965
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 141 ~ 141 (258)
T PRK07533 141 G 141 (258)
T ss_pred C
Confidence 3
No 12
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.69 E-value=2.5e-16 Score=91.58 Aligned_cols=75 Identities=17% Similarity=0.331 Sum_probs=68.0
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++++|++++++++++++.+.+.+| ++|++|||||.... .++.+.+.++|++++++|+.+++.++++++|+|.+.
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~ 138 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWG-KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG 138 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhC-CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC
Confidence 4689999999999999999999999 99999999998643 467788999999999999999999999999999743
No 13
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.69 E-value=4.1e-16 Score=90.00 Aligned_cols=77 Identities=14% Similarity=0.165 Sum_probs=69.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+.++++|++++++++++++.+.+.+| ++|++|||||+... .++.+.+.++|++++++|+.+++.+++.++|.|.
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~ 136 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVD-GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN 136 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcC-CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 567889999999999999999999999 99999999998643 3567888999999999999999999999999997
Q ss_pred hc
Q psy346 83 DF 84 (87)
Q Consensus 83 ~~ 84 (87)
+.
T Consensus 137 ~~ 138 (256)
T PRK07889 137 EG 138 (256)
T ss_pred cC
Confidence 54
No 14
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8.1e-16 Score=89.05 Aligned_cols=79 Identities=10% Similarity=0.195 Sum_probs=71.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|++++++++++++++. .+| ++|++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|+++
T Consensus 57 ~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g-~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~ 134 (263)
T PRK08339 57 NVDVSYIVADLTKREDLERTVKELK-NIG-EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK 134 (263)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHH-hhC-CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4567889999999999999999986 588 99999999998766778899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 135 ~ 135 (263)
T PRK08339 135 G 135 (263)
T ss_pred C
Confidence 4
No 15
>PRK06398 aldose dehydrogenase; Validated
Probab=99.68 E-value=1.1e-15 Score=88.25 Aligned_cols=78 Identities=19% Similarity=0.226 Sum_probs=72.0
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+..+++|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|+|.+.+
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 122 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYG-RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD 122 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 467889999999999999999999999 999999999987667888899999999999999999999999999997653
No 16
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.2e-15 Score=88.88 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=73.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.+| ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.++
T Consensus 54 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~ 132 (275)
T PRK05876 54 GFDVHGVMCDVRHREEVTHLADEAFRLLG-HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ 132 (275)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 44678889999999999999999999999 99999999999777788899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 133 ~ 133 (275)
T PRK05876 133 G 133 (275)
T ss_pred C
Confidence 4
No 17
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.68 E-value=1.5e-15 Score=87.43 Aligned_cols=80 Identities=28% Similarity=0.387 Sum_probs=72.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.++ ++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.++
T Consensus 56 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 56 GRRFLSLTADLRKIDGIPALLERAVAEFG-HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 34577889999999999999999999999 99999999998766778888999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 135 ~ 135 (253)
T PRK08993 135 G 135 (253)
T ss_pred C
Confidence 4
No 18
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.6e-15 Score=90.42 Aligned_cols=80 Identities=20% Similarity=0.187 Sum_probs=74.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++|+++++++++.+.+.+| ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|+|+++
T Consensus 55 g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~ 133 (330)
T PRK06139 55 GAEVLVVPTDVTDADQVKALATQAASFGG-RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ 133 (330)
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 55677889999999999999999999888 99999999999877888899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 134 ~ 134 (330)
T PRK06139 134 G 134 (330)
T ss_pred C
Confidence 4
No 19
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.5e-15 Score=87.31 Aligned_cols=80 Identities=19% Similarity=0.259 Sum_probs=73.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.+| ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.++
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (253)
T PRK05867 57 GGKVVPVCCDVSQHQQVTSMLDQVTAELG-GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ 135 (253)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 45677889999999999999999999999 99999999998766778888999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 136 ~ 136 (253)
T PRK05867 136 G 136 (253)
T ss_pred C
Confidence 4
No 20
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.9e-15 Score=87.07 Aligned_cols=80 Identities=29% Similarity=0.403 Sum_probs=72.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.++++++|.|.++
T Consensus 57 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 57 GARVLAVPADVTDAASVAAAVAAAEEAFG-PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHHhC-CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 45678899999999999999999999999 99999999998766666788899999999999999999999999999776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 136 ~ 136 (260)
T PRK07063 136 G 136 (260)
T ss_pred C
Confidence 4
No 21
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.1e-15 Score=87.12 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=72.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+.+|+++++++.++++++.+.+| ++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++
T Consensus 59 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 137 (265)
T PRK07062 59 ARLLAARCDVLDEADVAAFAAAVEARFG-GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA 137 (265)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 4677899999999999999999999999 999999999987667788899999999999999999999999999998763
No 22
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.66 E-value=2.3e-15 Score=86.75 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=73.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++++|+++++++.++++.+.+.+| ++|++|+|+|.....++.+.+.++|++++++|+.+++.++++++|.|.++
T Consensus 67 g~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 145 (256)
T PRK12859 67 GVKVSSMELDLTQNDAPKELLNKVTEQLG-YPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK 145 (256)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 45678899999999999999999999999 99999999998766778899999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 146 ~ 146 (256)
T PRK12859 146 S 146 (256)
T ss_pred C
Confidence 3
No 23
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.66 E-value=1.1e-15 Score=89.00 Aligned_cols=76 Identities=14% Similarity=0.307 Sum_probs=68.2
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+++|++++++++++++.+.+.+| ++|++|||||+... .++.+.+.++|++++++|+.+++.+++++.|.|.+
T Consensus 62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 140 (272)
T PRK08159 62 FVAGHCDVTDEASIDAVFETLEKKWG-KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD 140 (272)
T ss_pred ceEEecCCCCHHHHHHHHHHHHHhcC-CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 45689999999999999999999999 99999999998642 46678899999999999999999999999999865
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 141 ~ 141 (272)
T PRK08159 141 G 141 (272)
T ss_pred C
Confidence 4
No 24
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.66 E-value=1.4e-15 Score=87.81 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=70.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC----CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR----DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 80 (87)
+.++..+++|++|+++++++++++.+.+| ++|++|||+|... ..++.+.+.++|+..+++|+.+++.+++++.|.
T Consensus 58 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (257)
T PRK08594 58 GQESLLLPCDVTSDEEITACFETIKEEVG-VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKL 136 (257)
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHhCC-CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 35677889999999999999999999999 9999999999753 246678899999999999999999999999999
Q ss_pred HHhc
Q psy346 81 CLDF 84 (87)
Q Consensus 81 ~~~~ 84 (87)
|.+.
T Consensus 137 ~~~~ 140 (257)
T PRK08594 137 MTEG 140 (257)
T ss_pred cccC
Confidence 9654
No 25
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.65 E-value=1.5e-15 Score=89.65 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++++.++++++.+.+| ++|++|||||... ..++.+.+.++|++++++|+.+++.++|+++|.|+++|
T Consensus 104 ~~~v~~l~~~i~~~~G-~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G 172 (303)
T PLN02730 104 NWTVQEVAESVKADFG-SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGG 172 (303)
T ss_pred HHHHHHHHHHHHHHcC-CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 3489999999999999 9999999998643 36788999999999999999999999999999997654
No 26
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=1.1e-15 Score=88.36 Aligned_cols=75 Identities=17% Similarity=0.232 Sum_probs=65.8
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCc----c-cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN----W-FLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
..+.+|++++++++++++.+.+.+| ++|++|||||..... + +.+.+.++|++.+++|+.+++.++++++|+|.+
T Consensus 59 ~~~~~Dv~d~~~v~~~~~~~~~~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 59 LVFPCDVASDEQIDALFASLGQHWD-GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred ceeeccCCCHHHHHHHHHHHHHHhC-CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 4688999999999999999999999 999999999985432 2 346788999999999999999999999999954
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 138 ~ 138 (260)
T PRK06997 138 D 138 (260)
T ss_pred C
Confidence 3
No 27
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.9e-15 Score=87.46 Aligned_cols=78 Identities=23% Similarity=0.278 Sum_probs=71.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+..+.+|+++++++.++++++.+.+| ++|++|||+|+....++.+.+.++|++++++|+.+++.+++++.|.|.+.
T Consensus 57 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 134 (296)
T PRK05872 57 DRVLTVVADVTDLAAMQAAAEEAVERFG-GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER 134 (296)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4566677999999999999999999999 99999999999777888899999999999999999999999999999764
No 28
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=2e-15 Score=87.36 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=66.8
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCc----c-cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN----W-FLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
...++||++++++++++++.+.+.+| ++|++|||||+.... + +.+.+.++|+.++++|+.+++.+++++.|.|+
T Consensus 58 ~~~~~~Dv~~~~~v~~~~~~~~~~~g-~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~ 136 (261)
T PRK08690 58 ELVFRCDVASDDEINQVFADLGKHWD-GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR 136 (261)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhC-CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence 45789999999999999999999999 999999999986432 2 35678889999999999999999999999997
Q ss_pred hc
Q psy346 83 DF 84 (87)
Q Consensus 83 ~~ 84 (87)
++
T Consensus 137 ~~ 138 (261)
T PRK08690 137 GR 138 (261)
T ss_pred hc
Confidence 54
No 29
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=1.9e-15 Score=87.39 Aligned_cols=76 Identities=18% Similarity=0.291 Sum_probs=67.6
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+++|++++++++++++.+.+.+| ++|++|||+|.... .++.+.+.++|++++++|+.+++.+++++.|.|.+.
T Consensus 61 ~~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~ 139 (260)
T PRK06603 61 FVSELDVTNPKSISNLFDDIKEKWG-SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG 139 (260)
T ss_pred eEEEccCCCHHHHHHHHHHHHHHcC-CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 4578999999999999999999999 99999999997542 467788999999999999999999999999999654
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
|
T Consensus 140 G 140 (260)
T PRK06603 140 G 140 (260)
T ss_pred c
Confidence 3
No 30
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.3e-15 Score=85.98 Aligned_cols=80 Identities=23% Similarity=0.340 Sum_probs=72.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.+| ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.++
T Consensus 57 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK06114 57 GRRAIQIAADVTSKADLRAAVARTEAELG-ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN 135 (254)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 34677889999999999999999999999 99999999998766778889999999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 136 ~ 136 (254)
T PRK06114 136 G 136 (254)
T ss_pred C
Confidence 4
No 31
>PRK08589 short chain dehydrogenase; Validated
Probab=99.65 E-value=4.4e-15 Score=86.28 Aligned_cols=80 Identities=19% Similarity=0.266 Sum_probs=72.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.+|+++++++..+++.+.+.+| ++|++|||||.... .++.+.+.+.|++++++|+.+++.+++++.|.|++
T Consensus 53 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (272)
T PRK08589 53 GGKAKAYHVDISDEQQVKDFASEIKEQFG-RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME 131 (272)
T ss_pred CCeEEEEEeecCCHHHHHHHHHHHHHHcC-CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 45688899999999999999999999999 99999999998643 56778899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 132 ~~ 133 (272)
T PRK08589 132 QG 133 (272)
T ss_pred cC
Confidence 54
No 32
>PLN00015 protochlorophyllide reductase
Probab=99.65 E-value=4.7e-15 Score=87.59 Aligned_cols=80 Identities=11% Similarity=-0.003 Sum_probs=70.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+.++.+|+++.++++++++.+.+.++ ++|++|||||+... .+..+.+.++|++++++|+.|++.+++.++|.|.+
T Consensus 46 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~-~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~ 124 (308)
T PLN00015 46 KDSYTVMHLDLASLDSVRQFVDNFRRSGR-PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKK 124 (308)
T ss_pred CCeEEEEEecCCCHHHHHHHHHHHHhcCC-CCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 34677889999999999999999998888 99999999998543 35667889999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 125 ~~ 126 (308)
T PLN00015 125 SD 126 (308)
T ss_pred CC
Confidence 64
No 33
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.64 E-value=7.5e-15 Score=84.36 Aligned_cols=79 Identities=23% Similarity=0.232 Sum_probs=71.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.+.
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 127 (252)
T PRK07677 49 PGQVLTVQMDVRNPEDVQKMVEQIDEKFG-RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK 127 (252)
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHHhC-CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 34678899999999999999999999999 99999999997655677788999999999999999999999999998764
No 34
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.64 E-value=2.5e-15 Score=87.09 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=65.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcc-----cccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-----FLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.+..+.+|++++++++++++.+.+.+| ++|++|||||+....+ +.+.+.++|+.++++|+.+++.+++++.|.|
T Consensus 57 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 135 (262)
T PRK07984 57 SDIVLPCDVAEDASIDAMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 135 (262)
T ss_pred CceEeecCCCCHHHHHHHHHHHHhhcC-CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 456789999999999999999999999 9999999999754322 5567889999999999999999999998866
Q ss_pred Hh
Q psy346 82 LD 83 (87)
Q Consensus 82 ~~ 83 (87)
.+
T Consensus 136 ~~ 137 (262)
T PRK07984 136 NP 137 (262)
T ss_pred cC
Confidence 43
No 35
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.64 E-value=7.9e-15 Score=84.30 Aligned_cols=80 Identities=15% Similarity=0.147 Sum_probs=72.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|++
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~ 132 (254)
T PRK07478 54 GGEAVALAGDVRDEAYAKALVALAVERFG-GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA 132 (254)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999 9999999999864 357778899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 133 ~~ 134 (254)
T PRK07478 133 RG 134 (254)
T ss_pred cC
Confidence 64
No 36
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.6e-15 Score=85.38 Aligned_cols=80 Identities=16% Similarity=0.086 Sum_probs=73.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.++
T Consensus 61 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 139 (273)
T PRK08278 61 GGQALPLVGDVRDEDQVAAAVAKAVERFG-GIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS 139 (273)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc
Confidence 45678889999999999999999999999 99999999998766778888999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 140 ~ 140 (273)
T PRK08278 140 E 140 (273)
T ss_pred C
Confidence 4
No 37
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7e-15 Score=86.89 Aligned_cols=80 Identities=9% Similarity=0.027 Sum_probs=70.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc-cccC----CcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA-GITR----DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+.++..+.+|++++++++++++++.+.+| ++|++|||+ |... ..++.+.+.++|++++++|+.+++.++++++|
T Consensus 66 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp 144 (305)
T PRK08303 66 GGRGIAVQVDHLVPEQVRALVERIDREQG-RLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALP 144 (305)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcC-CccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34577889999999999999999999999 999999999 7531 25667888899999999999999999999999
Q ss_pred HHHhcC
Q psy346 80 VCLDFG 85 (87)
Q Consensus 80 ~~~~~~ 85 (87)
.|.+++
T Consensus 145 ~m~~~~ 150 (305)
T PRK08303 145 LLIRRP 150 (305)
T ss_pred HhhhCC
Confidence 997653
No 38
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.63 E-value=4.3e-15 Score=80.65 Aligned_cols=75 Identities=24% Similarity=0.319 Sum_probs=71.1
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+.++.++++|++++++++++++++.+.++ ++|++|||+|.....++.+.+.++|+++|++|+.+++.+.+++.|
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (167)
T PF00106_consen 50 PGAKITFIECDLSDPESIRALIEEVIKRFG-PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP 124 (167)
T ss_dssp TTSEEEEEESETTSHHHHHHHHHHHHHHHS-SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence 457889999999999999999999999999 999999999998888899999999999999999999999999998
No 39
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.63 E-value=9e-15 Score=87.31 Aligned_cols=81 Identities=21% Similarity=0.194 Sum_probs=74.3
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
.+.++..+.+|++|+++++++++.+.+.+| ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.|.+
T Consensus 55 ~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g-~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~ 133 (334)
T PRK07109 55 AGGEALAVVADVADAEAVQAAADRAEEELG-PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP 133 (334)
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHHCC-CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 356788899999999999999999999999 9999999999876777889999999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 134 ~~ 135 (334)
T PRK07109 134 RD 135 (334)
T ss_pred cC
Confidence 63
No 40
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.63 E-value=1.1e-14 Score=84.30 Aligned_cols=80 Identities=23% Similarity=0.301 Sum_probs=73.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++++++++++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+.+.+.|.|.+.
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (265)
T PRK07097 58 GIEAHGYVCDVTDEDGVQAMVSQIEKEVG-VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK 136 (265)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhCC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 45688899999999999999999999999 99999999999777788889999999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 137 ~ 137 (265)
T PRK07097 137 G 137 (265)
T ss_pred C
Confidence 3
No 41
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=9e-15 Score=84.15 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=70.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|.|.+++
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 129 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFG-RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK 129 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 366889999999999999999999999 999999999987667778889999999999999999999999999997553
No 42
>KOG0725|consensus
Probab=99.62 E-value=1.2e-14 Score=84.74 Aligned_cols=79 Identities=24% Similarity=0.242 Sum_probs=67.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHH-cCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHH-HHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEK-FSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKL-VDRRGGTAGKVC 81 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~-~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~ 81 (87)
+.++..+.||+++++++++++++..++ +| ++|++|||||.... .+..+.++++|++++++|++| .+.+.+++.+++
T Consensus 59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G-kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~ 137 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKEVDVEKLVEFAVEKFFG-KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPML 137 (270)
T ss_pred CCeeEEEECcCCCHHHHHHHHHHHHHHhCC-CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHH
Confidence 456889999999999999999999999 68 99999999999765 478999999999999999995 555555555666
Q ss_pred Hhc
Q psy346 82 LDF 84 (87)
Q Consensus 82 ~~~ 84 (87)
.++
T Consensus 138 ~~~ 140 (270)
T KOG0725|consen 138 KKS 140 (270)
T ss_pred Hhc
Confidence 553
No 43
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.62 E-value=1.7e-14 Score=83.16 Aligned_cols=80 Identities=24% Similarity=0.355 Sum_probs=73.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++..+++++.+.+| ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|+++
T Consensus 62 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (258)
T PRK06935 62 GRKVTFVQVDLTKPESAEKVVKEALEEFG-KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ 140 (258)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999 99999999998766778888899999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 141 ~ 141 (258)
T PRK06935 141 G 141 (258)
T ss_pred C
Confidence 4
No 44
>PRK06194 hypothetical protein; Provisional
Probab=99.62 E-value=1.4e-14 Score=84.47 Aligned_cols=80 Identities=23% Similarity=0.244 Sum_probs=73.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++.+++.++++.+.+.+| ++|++|||||.....++.+.+.++|+..+++|+.+++.++++++|.|+++
T Consensus 54 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~g-~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 54 GAEVLGVRTDVSDAAQVEALADAALERFG-AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999 99999999999777778888999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 133 ~ 133 (287)
T PRK06194 133 A 133 (287)
T ss_pred C
Confidence 4
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.61 E-value=1.2e-14 Score=91.09 Aligned_cols=80 Identities=25% Similarity=0.368 Sum_probs=74.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.+| ++|++|||||+....++.+.+.++|++++++|+.|++.+++++.|.|.++
T Consensus 363 ~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 441 (582)
T PRK05855 363 GAVAHAYRVDVSDADAMEAFAEWVRAEHG-VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER 441 (582)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhcC-CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999 99999999999877788899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 442 ~ 442 (582)
T PRK05855 442 G 442 (582)
T ss_pred C
Confidence 4
No 46
>PRK06128 oxidoreductase; Provisional
Probab=99.61 E-value=8.1e-15 Score=86.25 Aligned_cols=79 Identities=16% Similarity=0.135 Sum_probs=70.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|++++++++++++++.+.++ ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|.|.+
T Consensus 105 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 183 (300)
T PRK06128 105 GRKAVALPGDLKDEAFCRQLVERAVKELG-GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP 183 (300)
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHhC-CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 45677889999999999999999999999 9999999999853 356788899999999999999999999999998865
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 184 ~ 184 (300)
T PRK06128 184 G 184 (300)
T ss_pred C
Confidence 3
No 47
>PRK12743 oxidoreductase; Provisional
Probab=99.61 E-value=2.3e-14 Score=82.55 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=72.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+..+.+|++++++++++++++.+.++ ++|++|||+|.....++.+.+.++|++++.+|+.+++.+.+++.+.|.++
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 129 (256)
T PRK12743 51 GVRAEIRQLDLSDLPEGAQALDKLIQRLG-RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ 129 (256)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45688899999999999999999999999 99999999998766677788999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 130 ~ 130 (256)
T PRK12743 130 G 130 (256)
T ss_pred C
Confidence 3
No 48
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.8e-14 Score=83.48 Aligned_cols=79 Identities=20% Similarity=0.168 Sum_probs=73.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.++.+|++|++++.++++.+.+.+| ++|++|||+|.....++.+.+.+++++++++|+.+++.+++++.|.|.+++
T Consensus 45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 123 (270)
T PRK06179 45 PGVELLELDVTDDASVQAAVDEVIARAG-RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG 123 (270)
T ss_pred CCCeeEEeecCCHHHHHHHHHHHHHhCC-CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 3577899999999999999999999999 999999999997777788889999999999999999999999999998765
No 49
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.1e-14 Score=83.35 Aligned_cols=78 Identities=24% Similarity=0.324 Sum_probs=72.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.+.+++++++|+.+++.+++.++|.|.+++
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 128 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLG-PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG 128 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467889999999999999999999999 999999999998777788889999999999999999999999999998765
No 50
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.5e-14 Score=83.27 Aligned_cols=79 Identities=19% Similarity=0.330 Sum_probs=71.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.+.+
T Consensus 61 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 139 (257)
T PRK12744 61 AKAVAFQADLTTAAAVEKLFDDAKAAFG-RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG 139 (257)
T ss_pred CcEEEEecCcCCHHHHHHHHHHHHHhhC-CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC
Confidence 4677889999999999999999999999 999999999987667778889999999999999999999999999986544
No 51
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=1.6e-14 Score=85.30 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=71.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+ +| ++|++|||||......+.+.+.++|+.++++|+.+++.+++++.++|.++
T Consensus 61 g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 138 (306)
T PRK07792 61 GAKAVAVAGDISQRATADELVATAVG-LG-GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAK 138 (306)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHH-hC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 45788899999999999999999998 99 99999999999777778888999999999999999999999999999753
No 52
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.60 E-value=2.6e-14 Score=82.20 Aligned_cols=80 Identities=20% Similarity=0.351 Sum_probs=73.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.++
T Consensus 58 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK07523 58 GLSAHALAFDVTDHDAVRAAIDAFEAEIG-PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR 136 (255)
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 34578899999999999999999999999 99999999998777788889999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 137 ~ 137 (255)
T PRK07523 137 G 137 (255)
T ss_pred C
Confidence 3
No 53
>PRK06182 short chain dehydrogenase; Validated
Probab=99.60 E-value=2.1e-14 Score=83.38 Aligned_cols=78 Identities=22% Similarity=0.161 Sum_probs=72.3
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+++.++|.|++++
T Consensus 47 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 124 (273)
T PRK06182 47 GVHPLSLDVTDEASIKAAVDTIIAEEG-RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR 124 (273)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC
Confidence 467889999999999999999999999 999999999998777888999999999999999999999999999998764
No 54
>PRK08643 acetoin reductase; Validated
Probab=99.60 E-value=3.2e-14 Score=81.85 Aligned_cols=80 Identities=24% Similarity=0.358 Sum_probs=72.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++++|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+.+.|.+.
T Consensus 50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (256)
T PRK08643 50 GGKAIAVKADVSDRDQVFAAVRQVVDTFG-DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL 128 (256)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34677899999999999999999999999 99999999998766778888999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 129 ~ 129 (256)
T PRK08643 129 G 129 (256)
T ss_pred C
Confidence 3
No 55
>PRK09242 tropinone reductase; Provisional
Probab=99.60 E-value=3e-14 Score=82.00 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=72.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++.+.+.++ ++|++|||+|.....+..+.+.++|++.+.+|+.+++.+++++.|.|.++
T Consensus 59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 137 (257)
T PRK09242 59 EREVHGLAADVSDDEDRRAILDWVEDHWD-GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH 137 (257)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 45678889999999999999999999999 99999999998666677788999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 138 ~ 138 (257)
T PRK09242 138 A 138 (257)
T ss_pred C
Confidence 3
No 56
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.60 E-value=2.5e-14 Score=84.78 Aligned_cols=79 Identities=11% Similarity=-0.001 Sum_probs=68.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+..+.+|+++.++++++++.+.+.++ ++|++|||||+..+ .+..+.+.++|+.++++|+.+++.+++.++|.|.+
T Consensus 52 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~ 130 (314)
T TIGR01289 52 KDSYTIMHLDLGSLDSVRQFVQQFRESGR-PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKN 130 (314)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC-CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Confidence 34577889999999999999999988888 99999999997543 33446788999999999999999999999999987
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 131 ~ 131 (314)
T TIGR01289 131 S 131 (314)
T ss_pred C
Confidence 5
No 57
>PLN02253 xanthoxin dehydrogenase
Probab=99.60 E-value=3.2e-14 Score=82.83 Aligned_cols=78 Identities=26% Similarity=0.324 Sum_probs=70.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
.++.++.+|+++++++.++++.+.+.+| ++|++|||||.... .++.+.+.++|++++++|+.+++.+++++.+.|.+
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 144 (280)
T PLN02253 66 PNVCFFHCDVTVEDDVSRAVDFTVDKFG-TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIP 144 (280)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhC-CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999 99999999998543 45778899999999999999999999999999976
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 145 ~ 145 (280)
T PLN02253 145 L 145 (280)
T ss_pred c
Confidence 4
No 58
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.60 E-value=3.8e-14 Score=81.45 Aligned_cols=79 Identities=19% Similarity=0.150 Sum_probs=71.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.++
T Consensus 46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 46 GRPAEFHAADVRDPDQVAALVDAIVERHG-RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34677889999999999999999999999 99999999998766777788999999999999999999999999999764
No 59
>PRK07985 oxidoreductase; Provisional
Probab=99.59 E-value=2.5e-14 Score=84.11 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=70.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.+|+++++++.++++++.+.+| ++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.|.|.+
T Consensus 99 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 99 GRKAVLLPGDLSDEKFARSLVHEAHKALG-GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 44577889999999999999999999999 9999999999753 356778899999999999999999999999999865
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 178 ~ 178 (294)
T PRK07985 178 G 178 (294)
T ss_pred C
Confidence 4
No 60
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.59 E-value=3.9e-14 Score=81.46 Aligned_cols=80 Identities=23% Similarity=0.368 Sum_probs=72.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++.+.|.++
T Consensus 57 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK08085 57 GIKAHAAPFNVTHKQEVEAAIEHIEKDIG-PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR 135 (254)
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 34677889999999999999999999999 99999999998766778889999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 136 ~ 136 (254)
T PRK08085 136 Q 136 (254)
T ss_pred C
Confidence 3
No 61
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.59 E-value=8.7e-15 Score=83.70 Aligned_cols=75 Identities=25% Similarity=0.353 Sum_probs=69.4
Q ss_pred eeeccCCChHHHHHHHHHHHHHc-CCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 10 SLPMDVSNTSTISTAMSAIKEKF-SRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 10 ~~~~D~~~~~~~~~~~~~~~~~~-g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.+.+|++++++++++++.+.+.+ | ++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++++.|.|.++
T Consensus 48 ~~~~D~~~~~~v~~~~~~~~~~~~g-~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (241)
T PF13561_consen 48 VIQCDLSDEESVEALFDEAVERFGG-RIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG 126 (241)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHCS-SESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE
T ss_pred eEeecCcchHHHHHHHHHHHhhcCC-CeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 58999999999999999999999 8 99999999998764 678889999999999999999999999999988776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
|
T Consensus 127 g 127 (241)
T PF13561_consen 127 G 127 (241)
T ss_dssp E
T ss_pred C
Confidence 4
No 62
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.59 E-value=4.2e-14 Score=80.89 Aligned_cols=80 Identities=28% Similarity=0.324 Sum_probs=72.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++.+++.++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+.+++.+.|.++
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 52 GFDFIASEGNVGDWDSTKAAFDKVKAEVG-EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 44677889999999999999999999999 99999999998766778888999999999999999999999999999776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 131 ~ 131 (246)
T PRK12938 131 G 131 (246)
T ss_pred C
Confidence 4
No 63
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.59 E-value=4.7e-14 Score=81.48 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=72.3
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+++|+++++++.++++.+.+.+| ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|++++
T Consensus 69 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 147 (262)
T PRK07831 69 GRVEAVVCDVTSEAQVDALIDAAVERLG-RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG 147 (262)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 3677889999999999999999999999 999999999987667788899999999999999999999999999998754
No 64
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.59 E-value=4.4e-14 Score=82.14 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=72.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
..+.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+.|.|++++
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (275)
T PRK08263 49 DRLLPLALDVTDRAAVFAAVETAVEHFG-RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR 127 (275)
T ss_pred CCeeEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 4577889999999999999999999999 999999999998778888999999999999999999999999999998754
No 65
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.59 E-value=5e-14 Score=81.31 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=72.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++.+++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.++
T Consensus 56 ~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 134 (261)
T PRK08936 56 GGEAIAVKGDVTVESDVVNLIQTAVKEFG-TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH 134 (261)
T ss_pred CCeEEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 44677889999999999999999999999 99999999998777778888999999999999999999999999999875
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 135 ~ 135 (261)
T PRK08936 135 D 135 (261)
T ss_pred C
Confidence 3
No 66
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.59 E-value=6.4e-14 Score=79.80 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=70.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.+|++++++++++++.+.+.+|+++|++|||+|... ..++.+.+.++|.+.+.+|+.+++.+++.+.|+|.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 132 (227)
T PRK08862 53 TDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRK 132 (227)
T ss_pred CCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 4567788999999999999999999887536999999998643 457888899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 133 ~~ 134 (227)
T PRK08862 133 RN 134 (227)
T ss_pred cC
Confidence 53
No 67
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.58 E-value=5.6e-14 Score=80.98 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=71.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++|.+++.++++.+.+.++ ++|++|||+|.....++.+.+.+.|++++++|+.+++.+++++.+.|.+.
T Consensus 58 ~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~-~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (258)
T PRK09134 58 GRRAVALQADLADEAEVRALVARASAALG-PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD 136 (258)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999998 99999999998766777888999999999999999999999999998764
No 68
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.58 E-value=4.7e-14 Score=80.77 Aligned_cols=80 Identities=35% Similarity=0.414 Sum_probs=72.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.++
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 51 GRRFLSLTADLSDIEAIKALVDSAVEEFG-HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 34678899999999999999999999998 99999999998776777788899999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 130 ~ 130 (248)
T TIGR01832 130 G 130 (248)
T ss_pred C
Confidence 4
No 69
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.58 E-value=3.2e-14 Score=82.14 Aligned_cols=80 Identities=16% Similarity=0.270 Sum_probs=70.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC------CcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR------DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.++.++++|++++++++++++++.+.++ ++|++|||||... ..++.+.+.++|++++++|+.+++.+++.+.
T Consensus 58 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 136 (260)
T PRK08416 58 GIKAKAYPLNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAA 136 (260)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhcC-CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 45788999999999999999999999999 9999999998642 2456788889999999999999999999999
Q ss_pred HHHHhcC
Q psy346 79 KVCLDFG 85 (87)
Q Consensus 79 ~~~~~~~ 85 (87)
|.|.+.+
T Consensus 137 ~~~~~~~ 143 (260)
T PRK08416 137 KRMEKVG 143 (260)
T ss_pred HhhhccC
Confidence 9998653
No 70
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.58 E-value=5.5e-14 Score=80.50 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=73.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++.+.|.++
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (250)
T PRK08063 53 GRKALAVKANVGDVEKIKEMFAQIDEEFG-RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV 131 (250)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45677889999999999999999999999 99999999998777788889999999999999999999999999999875
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 132 ~ 132 (250)
T PRK08063 132 G 132 (250)
T ss_pred C
Confidence 4
No 71
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.58 E-value=3.8e-14 Score=80.75 Aligned_cols=77 Identities=8% Similarity=0.001 Sum_probs=68.8
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+.++.+|+++++++.++++.+.+.++ ++|++|||+|........+.+.++|++++++|+.+++.+++.+.+.|.+++
T Consensus 48 ~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~ 124 (236)
T PRK06483 48 AQCIQADFSTNAGIMAFIDELKQHTD-GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG 124 (236)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCC-CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999 999999999986555556778899999999999999999999999998754
No 72
>PRK05717 oxidoreductase; Validated
Probab=99.58 E-value=6.8e-14 Score=80.53 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=70.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
..+.++.+|+++++++.++++++.+.+| ++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++++.|.|.+
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (255)
T PRK05717 56 ENAWFIAMDVADEAQVAAGVAEVLGQFG-RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA 134 (255)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4577889999999999999999999999 99999999998643 56778899999999999999999999999999876
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 135 ~ 135 (255)
T PRK05717 135 H 135 (255)
T ss_pred c
Confidence 4
No 73
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.57 E-value=5e-14 Score=81.71 Aligned_cols=80 Identities=21% Similarity=0.238 Sum_probs=73.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.|.|.++
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 126 (270)
T PRK05650 48 GGDGFYQRCDVRDYSQLTALAQACEEKWG-GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ 126 (270)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999998 99999999999877778888999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 127 ~ 127 (270)
T PRK05650 127 K 127 (270)
T ss_pred C
Confidence 4
No 74
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.57 E-value=6.5e-14 Score=80.72 Aligned_cols=80 Identities=23% Similarity=0.170 Sum_probs=71.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (260)
T PRK12823 55 GGEALALTADLETYAGAQAAMAAAVEAFG-RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA 133 (260)
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHHHHHcC-CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999999 9999999998653 467788899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 134 ~~ 135 (260)
T PRK12823 134 QG 135 (260)
T ss_pred cC
Confidence 64
No 75
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.57 E-value=7.1e-14 Score=80.22 Aligned_cols=80 Identities=28% Similarity=0.371 Sum_probs=73.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+.+.|.++
T Consensus 48 ~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 126 (254)
T TIGR02415 48 GGKAVAYKLDVSDKDQVFSAIDQAAEKFG-GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQ 126 (254)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 45678889999999999999999999999 99999999998777778899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 127 ~ 127 (254)
T TIGR02415 127 G 127 (254)
T ss_pred C
Confidence 4
No 76
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.57 E-value=6.5e-14 Score=80.68 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=72.9
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.++.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++.+.|++++
T Consensus 53 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 131 (259)
T PRK12384 53 GMAYGFGADATSEQSVLALSRGVDEIFG-RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG 131 (259)
T ss_pred ceeEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC
Confidence 4578899999999999999999999999 999999999987777788899999999999999999999999999998764
No 77
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=7.7e-14 Score=80.35 Aligned_cols=79 Identities=16% Similarity=0.237 Sum_probs=72.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+++.+.|.+.
T Consensus 66 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 144 (256)
T PRK12748 66 GVRCEHMEIDLSQPYAPNRVFYAVSERLG-DPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK 144 (256)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhCC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Confidence 34688899999999999999999999999 99999999998766778888999999999999999999999999998654
No 78
>PRK06484 short chain dehydrogenase; Validated
Probab=99.57 E-value=3.1e-14 Score=88.82 Aligned_cols=78 Identities=28% Similarity=0.433 Sum_probs=70.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.+|+++++++.++++.+.+.+| ++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+
T Consensus 314 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 392 (520)
T PRK06484 314 GDEHLSVQADITDEAAVESAFAQIQARWG-RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ 392 (520)
T ss_pred CCceeEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 34567789999999999999999999999 9999999999864 357788899999999999999999999999999943
No 79
>PRK06484 short chain dehydrogenase; Validated
Probab=99.57 E-value=6e-14 Score=87.58 Aligned_cols=80 Identities=28% Similarity=0.368 Sum_probs=71.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.++..+++|+++++++.++++.+.+.+| ++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (520)
T PRK06484 50 GPDHHALAMDVSDEAQIREGFEQLHREFG-RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMI 128 (520)
T ss_pred CCceeEEEeccCCHHHHHHHHHHHHHHhC-CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34567789999999999999999999999 9999999999843 25677889999999999999999999999999997
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+++
T Consensus 129 ~~~ 131 (520)
T PRK06484 129 EQG 131 (520)
T ss_pred hcC
Confidence 653
No 80
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.57 E-value=7.8e-14 Score=80.64 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=67.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.++.++++|+++++++.++++.+.+.++ ++|++|||+|......+ +.+.++|++.+++|+.+++.+++++.|.|.
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (261)
T PRK08265 51 GERARFIATDITDDAAIERAVATVVARFG-RVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA 126 (261)
T ss_pred CCeeEEEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh
Confidence 34578899999999999999999999999 99999999998654433 568899999999999999999999999996
No 81
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.56 E-value=7e-14 Score=80.31 Aligned_cols=81 Identities=19% Similarity=0.184 Sum_probs=68.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHc----C-CCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKF----S-RPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~----g-~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+..+..+.+|+++.+++..+++.+.+.. + +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 53 GGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred CCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3456788999999999999888877532 2 1799999999986666788889999999999999999999999999
Q ss_pred HHHhcC
Q psy346 80 VCLDFG 85 (87)
Q Consensus 80 ~~~~~~ 85 (87)
.|.+.|
T Consensus 133 ~~~~~g 138 (252)
T PRK12747 133 RLRDNS 138 (252)
T ss_pred HhhcCC
Confidence 997643
No 82
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.56 E-value=5e-14 Score=83.46 Aligned_cols=78 Identities=14% Similarity=0.058 Sum_probs=68.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+.++.+|+++.++++++++++.+.++ ++|++|||||.... +..+.+.+.|+.++.+|+.+++.+++.++|.|.+.
T Consensus 64 ~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~-~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~ 141 (313)
T PRK05854 64 DAKLSLRALDLSSLASVAALGEQLRAEGR-PIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG 141 (313)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhCC-CccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC
Confidence 34678899999999999999999999999 99999999998643 33456778999999999999999999999999764
No 83
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.1e-13 Score=79.84 Aligned_cols=79 Identities=24% Similarity=0.273 Sum_probs=72.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+++.+.|.+.
T Consensus 53 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 53 GHRCTAVVADVRDPASVAAAIKRAKEKEG-RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 34677889999999999999999999999 99999999998766778888999999999999999999999999988764
No 84
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1.2e-13 Score=79.71 Aligned_cols=80 Identities=21% Similarity=0.196 Sum_probs=71.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHH-cCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEK-FSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~-~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+.++.+|+++++++.++++.+.+. ++ ++|++|||+|.....++.+.+.++++.++++|+.+++.+++++.+.|+.
T Consensus 47 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 125 (260)
T PRK08267 47 AGNAWTGALDVTDRAAWDAALADFAAATGG-RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA 125 (260)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCC-CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 356888999999999999999988777 67 9999999999977777888899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
.+
T Consensus 126 ~~ 127 (260)
T PRK08267 126 TP 127 (260)
T ss_pred CC
Confidence 53
No 85
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.56 E-value=9.9e-14 Score=80.84 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=70.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+.++.+|++++++++.+++.+.+.+++++|++|||+|.....++.+.+.++++.++++|+.|++.+++.++|.|.+++
T Consensus 48 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~ 126 (277)
T PRK05993 48 GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG 126 (277)
T ss_pred CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC
Confidence 4667899999999999999999777632899999999987777788899999999999999999999999999998764
No 86
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=4.3e-14 Score=83.39 Aligned_cols=65 Identities=17% Similarity=0.170 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 20 TISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 20 ~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++.++++.+.+.+| ++|++|||||... ..++.+.+.++|++++++|+.|++.++++++|.|+++|
T Consensus 105 si~~~~~~v~~~~G-~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G 171 (299)
T PRK06300 105 TISEVAEQVKKDFG-HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGG 171 (299)
T ss_pred HHHHHHHHHHHHcC-CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCC
Confidence 58999999999999 9999999998753 46788999999999999999999999999999997654
No 87
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.56 E-value=9.7e-14 Score=79.40 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=71.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++++|+++.+++..+++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|.+.
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (249)
T PRK06500 51 GESALVIRADAGDVAAQKALAQALAEAFG-RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP 129 (249)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 34677889999999999999999999999 99999999998766677788999999999999999999999999988654
No 88
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.56 E-value=1.4e-13 Score=79.24 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=73.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.+.+.|.++
T Consensus 59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK06124 59 GGAAEALAFDIADEEAVAAAFARIDAEHG-RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137 (256)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 44678899999999999999999999999 99999999998776778888999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 138 ~ 138 (256)
T PRK06124 138 G 138 (256)
T ss_pred C
Confidence 4
No 89
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.56 E-value=1.5e-13 Score=78.84 Aligned_cols=80 Identities=24% Similarity=0.220 Sum_probs=72.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|.++
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (252)
T PRK08220 47 DYPFATFVLDVSDAAAVAQVCQRLLAETG-PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ 125 (252)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999999999 99999999998766778888999999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 126 ~ 126 (252)
T PRK08220 126 R 126 (252)
T ss_pred C
Confidence 4
No 90
>PRK05599 hypothetical protein; Provisional
Probab=99.56 E-value=1.1e-13 Score=79.51 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=68.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.+.++++|++|+++++++++++.+.+| ++|++|||+|.....+..+.+.+.+.+++++|+.+++.+.+.+.|.|.++
T Consensus 50 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g-~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 126 (246)
T PRK05599 50 SVHVLSFDAQDLDTHRELVKQTQELAG-EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ 126 (246)
T ss_pred ceEEEEcccCCHHHHHHHHHHHHHhcC-CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 477899999999999999999999999 99999999998655556677778889999999999999999999999765
No 91
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.4e-13 Score=79.71 Aligned_cols=79 Identities=22% Similarity=0.223 Sum_probs=70.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++
T Consensus 58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~~~-~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~ 136 (264)
T PRK07576 58 PEGLGVSADVRDYAAVEAAFAQIADEFG-PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG 136 (264)
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 4567789999999999999999999998 999999999876666778889999999999999999999999999987553
No 92
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.55 E-value=9.1e-14 Score=79.35 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=71.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.+.
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 132 (245)
T PRK12937 54 GGRAIAVQADVADAAAVTRLFDAAETAFG-RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG 132 (245)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC
Confidence 45678899999999999999999999999 99999999998766777888899999999999999999999999988653
No 93
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.3e-13 Score=79.46 Aligned_cols=78 Identities=15% Similarity=0.083 Sum_probs=68.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccc-cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++.++.+|+++++++.++++++.+.+| ++|++|||+|........ +.+.++|+.++++|+.+++.+++.++|.|.+++
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~ 129 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHG-LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR 129 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCC-CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC
Confidence 678899999999999999999999999 999999999986543333 377899999999999999999999999997764
No 94
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.55 E-value=2e-13 Score=77.94 Aligned_cols=80 Identities=28% Similarity=0.389 Sum_probs=72.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++.+++.|.+.
T Consensus 51 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12824 51 EDQVRLKELDVTDTEECAEALAEIEEEEG-PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ 129 (245)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 34678899999999999999999999999 99999999998776777888999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 130 ~ 130 (245)
T PRK12824 130 G 130 (245)
T ss_pred C
Confidence 3
No 95
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.7e-13 Score=79.01 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=70.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
..+.++.+|+++++++.++++++.+.++ ++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++++.|.+
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (260)
T PRK06523 49 EGVEFVAADLTTAEGCAAVARAVLERLG-GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA 127 (260)
T ss_pred CceeEEecCCCCHHHHHHHHHHHHHHcC-CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh
Confidence 3567889999999999999999999999 9999999999743 356777889999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 128 ~~ 129 (260)
T PRK06523 128 RG 129 (260)
T ss_pred cC
Confidence 64
No 96
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.55 E-value=1.7e-13 Score=78.39 Aligned_cols=80 Identities=29% Similarity=0.362 Sum_probs=72.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||+|......+.+.+.+.+++++++|+.+++.+++++.|.|.+.
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (247)
T PRK12935 55 GHDVYAVQADVSKVEDANRLVEEAVNHFG-KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA 133 (247)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 45688899999999999999999999999 99999999998766667788889999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 134 ~ 134 (247)
T PRK12935 134 E 134 (247)
T ss_pred C
Confidence 3
No 97
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.6e-13 Score=79.88 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=72.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++++++|+.+++.+++++.|.|++++
T Consensus 50 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~-~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 50 DRALARLLDVTDFDAIDAVVADAEATFG-PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred CCeeEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 3577889999999999999999999999 999999999987667788889999999999999999999999999997654
No 98
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.54 E-value=1.8e-13 Score=78.80 Aligned_cols=78 Identities=18% Similarity=0.293 Sum_probs=71.3
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+..+.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++.+.|.++
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 52 PAAIAVSLDVTRQDSIDRIVAAAVERFG-GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 3467889999999999999999999999 99999999998766778888999999999999999999999999999765
No 99
>KOG1610|consensus
Probab=99.54 E-value=1.1e-13 Score=81.00 Aligned_cols=82 Identities=24% Similarity=0.155 Sum_probs=72.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCC-CCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSR-PPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
..+...+.+|++++++++++.+.+++..+. ++-++|||||+.. .++.+-.+.++|++++++|+.|++.++++++|.++
T Consensus 75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr 154 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR 154 (322)
T ss_pred CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 456778899999999999999999998764 6889999999764 47777888999999999999999999999999998
Q ss_pred hcCC
Q psy346 83 DFGH 86 (87)
Q Consensus 83 ~~~~ 86 (87)
++++
T Consensus 155 ~arG 158 (322)
T KOG1610|consen 155 RARG 158 (322)
T ss_pred hccC
Confidence 8754
No 100
>PRK07069 short chain dehydrogenase; Validated
Probab=99.54 E-value=1.9e-13 Score=78.29 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=70.4
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.+++++++++|+.+++.+++.+.+.|.+++
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (251)
T PRK07069 53 AFAAVQDVTDEAQWQALLAQAADAMG-GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ 129 (251)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcC-CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 45678999999999999999999999 999999999987777788889999999999999999999999999998753
No 101
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.54 E-value=1.9e-13 Score=81.14 Aligned_cols=80 Identities=8% Similarity=-0.077 Sum_probs=68.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+.++.+|+++.+++.++++.+.+.++ ++|++|||||+... ....+.+.++|+.++.+|+.+++.+++++.|.|++
T Consensus 54 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 132 (322)
T PRK07453 54 PDSYTIIHIDLGDLDSVRRFVDDFRALGK-PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKK 132 (322)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhCC-CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 34678889999999999999999887777 89999999998543 23346788999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
.+
T Consensus 133 ~~ 134 (322)
T PRK07453 133 SP 134 (322)
T ss_pred CC
Confidence 64
No 102
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.3e-13 Score=78.21 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=71.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.+|+++++++..+++.+.+.+| ++|++|||+|.... .++.+.+.++|++.+++|+.+++.++++++|.|.+
T Consensus 55 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (253)
T PRK06172 55 GGEALFVACDVTRDAEVKALVEQTIAAYG-RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA 133 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999 99999999998644 45778899999999999999999999999999976
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 134 ~~ 135 (253)
T PRK06172 134 QG 135 (253)
T ss_pred cC
Confidence 53
No 103
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.9e-13 Score=77.53 Aligned_cols=80 Identities=10% Similarity=0.084 Sum_probs=72.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+.++.+|+++++++.++++++.+.++ ++|++|+|+|+....++.+.+.+.+++.+++|+.+++.+.+++.+.|.+.
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (248)
T PRK08251 52 GIKVAVAALDVNDHDQVFEVFAEFRDELG-GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ 130 (248)
T ss_pred CceEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 45788899999999999999999999999 99999999999777777788889999999999999999999999998775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 131 ~ 131 (248)
T PRK08251 131 G 131 (248)
T ss_pred C
Confidence 4
No 104
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.1e-13 Score=77.84 Aligned_cols=80 Identities=25% Similarity=0.334 Sum_probs=72.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++++..+.+|+.+++.+++.+.+.|.+.
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 132 (241)
T PRK07454 54 GVKAAAYSIDLSNPEAIAPGIAELLEQFG-CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR 132 (241)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 35678899999999999999999999999 99999999998766777788899999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 133 ~ 133 (241)
T PRK07454 133 G 133 (241)
T ss_pred C
Confidence 3
No 105
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.4e-13 Score=78.16 Aligned_cols=79 Identities=25% Similarity=0.351 Sum_probs=71.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
..+..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++.+.|.+++
T Consensus 61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (255)
T PRK06841 61 GNAKGLVCDVSDSQSVEAAVAAVISAFG-RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG 139 (255)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Confidence 3456889999999999999999999998 999999999987667777889999999999999999999999999997754
No 106
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.7e-13 Score=77.72 Aligned_cols=80 Identities=20% Similarity=0.212 Sum_probs=72.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++|+++++++++.+.+.++ ++|++|||+|.....++.+.+.++++.++++|+.+++.+++++.+.|+++
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (252)
T PRK06138 52 GGRAFARQGDVGSAEAVEALVDFVAARWG-RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ 130 (252)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Confidence 34578899999999999999999999999 99999999998777777788999999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 131 ~ 131 (252)
T PRK06138 131 G 131 (252)
T ss_pred C
Confidence 3
No 107
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.54 E-value=2.5e-13 Score=78.91 Aligned_cols=76 Identities=20% Similarity=0.166 Sum_probs=69.5
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++.|.|.++
T Consensus 52 ~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 127 (272)
T PRK07832 52 PEHRALDISDYDAVAAFAADIHAAHG-SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA 127 (272)
T ss_pred ceEEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 45578999999999999999999998 99999999998766778899999999999999999999999999999764
No 108
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.6e-13 Score=79.79 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=69.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccC--CHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL--TEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.++.++.+|++|++++.++++.+.+.+| ++|++|||||.....++.+. +.++++..+++|+.+++.++++++|.|.
T Consensus 88 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g-~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 88 GGDAMAVPCDLSDLDAVDALVADVEKRIG-GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999 99999999998765555443 4678999999999999999999999998
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+++
T Consensus 167 ~~~ 169 (293)
T PRK05866 167 ERG 169 (293)
T ss_pred hcC
Confidence 764
No 109
>KOG1208|consensus
Probab=99.53 E-value=7.4e-14 Score=82.75 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=70.5
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
....+.++.+|+++..++.++.++..+..+ ++|++|||||+..... ..+.|.++..|.+|+.|+|.+++.++|.|++
T Consensus 84 ~~~~i~~~~lDLssl~SV~~fa~~~~~~~~-~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~ 160 (314)
T KOG1208|consen 84 ANQKIRVIQLDLSSLKSVRKFAEEFKKKEG-PLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKR 160 (314)
T ss_pred CCCceEEEECCCCCHHHHHHHHHHHHhcCC-CccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhh
Confidence 346678899999999999999999999999 9999999999975543 6677889999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
..
T Consensus 161 s~ 162 (314)
T KOG1208|consen 161 SA 162 (314)
T ss_pred CC
Confidence 64
No 110
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3.3e-13 Score=77.64 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=71.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.... .++.+.+.++|++++++|+.+++.+++++.+.|.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (258)
T PRK07890 53 GRRALAVPTDITDEDQCANLVALALERFG-RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE 131 (258)
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHcC-CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999 99999999998543 66778889999999999999999999999999876
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 132 ~ 132 (258)
T PRK07890 132 S 132 (258)
T ss_pred C
Confidence 4
No 111
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3.1e-13 Score=77.36 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+..+.+|+++.+++.++++.+.+.++ ++|++|||+|.... .++.+.+.++|++++++|+.+++.+++++.+.|.+
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06123 51 GGEALAVAADVADEADVLRLFEAVDRELG-RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMST 129 (248)
T ss_pred CCcEEEEEeccCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 34577899999999999999999999999 99999999998644 46778889999999999999999999999999975
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 130 ~ 130 (248)
T PRK06123 130 R 130 (248)
T ss_pred c
Confidence 4
No 112
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.52 E-value=2.7e-13 Score=78.42 Aligned_cols=78 Identities=27% Similarity=0.313 Sum_probs=68.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCc---------ccccCCHHHHHHHHHhhhHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN---------WFLKLTEKDFQQVFDVNLKLVDRRGGTA 77 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 77 (87)
++.++.+|+++++++.++++.+.+.++ ++|++|||+|..... +..+.+.++|++++++|+.+++.+++++
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFG-RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAV 128 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHH
Confidence 567889999999999999999999999 999999999975432 2346788999999999999999999999
Q ss_pred HHHHHhcC
Q psy346 78 GKVCLDFG 85 (87)
Q Consensus 78 ~~~~~~~~ 85 (87)
.++|.+++
T Consensus 129 ~~~~~~~~ 136 (266)
T PRK06171 129 ARQMVKQH 136 (266)
T ss_pred HHHHHhcC
Confidence 99998653
No 113
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.52 E-value=3.7e-13 Score=76.79 Aligned_cols=78 Identities=22% Similarity=0.367 Sum_probs=70.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++..+.+|+++.++++++++++.+.++ ++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++.+.|.++
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12936 52 ERVKIFPANLSDRDEVKALGQKAEADLE-GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR 129 (245)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 3577889999999999999999999999 99999999998766677788889999999999999999999999887654
No 114
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.3e-13 Score=78.00 Aligned_cols=79 Identities=16% Similarity=0.106 Sum_probs=71.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.++.+|+++.+++.++++.+.+.++ ++|++|||+|.....+..+.+.+++++.+++|+.+++.+++++.|.|++++
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 126 (276)
T PRK06482 48 DRLWVLQLDVTDSAAVRAVVDRAFAALG-RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG 126 (276)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4577889999999999999999999888 999999999987777777888899999999999999999999999997654
No 115
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.52 E-value=3.5e-13 Score=78.40 Aligned_cols=80 Identities=28% Similarity=0.344 Sum_probs=70.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC---------------cccccCCHHHHHHHHHhhhHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD---------------NWFLKLTEKDFQQVFDVNLKL 69 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~ 69 (87)
+.++..+.+|+++++++..+++++.+.++ ++|++|||+|...+ .++.+.+.++|++.+++|+.+
T Consensus 58 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 58 GGEALAVKADVLDKESLEQARQQILEDFG-PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 45678899999999999999999999999 99999999996432 246678899999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q psy346 70 VDRRGGTAGKVCLDFG 85 (87)
Q Consensus 70 ~~~~~~~~~~~~~~~~ 85 (87)
++.+++.+.|.|.+++
T Consensus 137 ~~~~~~~~~~~~~~~~ 152 (278)
T PRK08277 137 TLLPTQVFAKDMVGRK 152 (278)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999997763
No 116
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3.6e-13 Score=78.28 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=69.6
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++.|.|.+.
T Consensus 46 ~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 121 (274)
T PRK05693 46 FTAVQLDVNDGAALARLAEELEAEHG-GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS 121 (274)
T ss_pred CeEEEeeCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 56788999999999999999999998 99999999998766777888999999999999999999999999998764
No 117
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.52 E-value=1.8e-13 Score=79.07 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=67.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHH----HHHHHHhhhHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKD----FQQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~ 80 (87)
.++..+++|+++++++..+++++.+.++ ++|++|||+|+... .++.+.+.++ |++++++|+.+++.+++++.|.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 130 (263)
T PRK06200 52 DHVLVVEGDVTSYADNQRAVDQTVDAFG-KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPA 130 (263)
T ss_pred CcceEEEccCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHH
Confidence 3567889999999999999999999999 99999999998643 4555666655 8999999999999999999999
Q ss_pred HHhcC
Q psy346 81 CLDFG 85 (87)
Q Consensus 81 ~~~~~ 85 (87)
|.+++
T Consensus 131 ~~~~~ 135 (263)
T PRK06200 131 LKASG 135 (263)
T ss_pred HHhcC
Confidence 87653
No 118
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4e-13 Score=77.73 Aligned_cols=79 Identities=19% Similarity=0.219 Sum_probs=71.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||||.....++.+.+.++++.++++|+.+++.+.+++.++|.+.
T Consensus 58 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 58 GRRAHVVAADLAHPEATAGLAGQAVEAFG-RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 45678889999999999999999999999 99999999998666777888999999999999999999999999999763
No 119
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=4.9e-13 Score=76.28 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=72.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++.+.|.++
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (239)
T PRK07666 55 GVKVVIATADVSDYEEVTAAIEQLKNELG-SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER 133 (239)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 34678889999999999999999999999 99999999998766677788899999999999999999999999999776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 134 ~ 134 (239)
T PRK07666 134 Q 134 (239)
T ss_pred C
Confidence 4
No 120
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.51 E-value=5.6e-13 Score=75.95 Aligned_cols=80 Identities=30% Similarity=0.331 Sum_probs=72.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+.
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 127 (242)
T TIGR01829 49 GFDFRVVEGDVSSFESCKAAVAKVEAELG-PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER 127 (242)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 34677899999999999999999999999 99999999998766677788999999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 128 ~ 128 (242)
T TIGR01829 128 G 128 (242)
T ss_pred C
Confidence 4
No 121
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.51 E-value=5.4e-13 Score=76.79 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=69.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++.+++.++++.+.+.++ ++|++|||+|.....++ +.+.++|+..+++|+.+++.+++++.|.|.+.
T Consensus 59 ~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK06113 59 GGQAFACRCDITSEQELSALADFALSKLG-KVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN 136 (255)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 44677889999999999999999999999 99999999998655544 67889999999999999999999999998754
No 122
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.2e-13 Score=77.39 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=67.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++. ++ ++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++.|.|.++
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~----~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (259)
T PRK06125 56 GVDVAVHALDLSSPEAREQLAAE----AG-DIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR 130 (259)
T ss_pred CCceEEEEecCCCHHHHHHHHHH----hC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 45678889999999998887654 57 99999999998766788899999999999999999999999999999876
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 131 ~ 131 (259)
T PRK06125 131 G 131 (259)
T ss_pred C
Confidence 3
No 123
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.51 E-value=4e-13 Score=77.53 Aligned_cols=76 Identities=14% Similarity=0.077 Sum_probs=68.0
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
++..+.+|++++++++++++++.+.++ ++|++|||+|... ..++.+.+.++|.+.+++|+.+++.+++.+++.|.+
T Consensus 49 ~~~~~~~Dv~d~~~~~~~~~~~~~~~g-~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~ 126 (259)
T PRK08340 49 EVYAVKADLSDKDDLKNLVKEAWELLG-GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLE 126 (259)
T ss_pred CceEEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHh
Confidence 577889999999999999999999999 9999999999753 345778888999999999999999999999998864
No 124
>PRK09186 flagellin modification protein A; Provisional
Probab=99.51 E-value=5.6e-13 Score=76.59 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=68.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC---CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR---DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
.+.++.+|+++++++.++++.+.+.++ ++|++|||||... ..++.+.+.+.|+..+++|+.+++.++++++|.|++
T Consensus 56 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~-~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (256)
T PRK09186 56 KLSLVELDITDQESLEEFLSKSAEKYG-KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK 134 (256)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHHcC-CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 345679999999999999999999999 9999999997642 246778899999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 135 ~~ 136 (256)
T PRK09186 135 QG 136 (256)
T ss_pred cC
Confidence 64
No 125
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.50 E-value=6.7e-13 Score=76.19 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=70.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++.++.+|+++++++..+++.+.+.++ ++|++|||+|... ..++.+.+.++|++++++|+.+++.+++.+.+.|.++
T Consensus 46 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (248)
T PRK10538 46 DNLYIAQLDVRNRAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER 124 (248)
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4677889999999999999999999998 9999999999753 3566788899999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 125 ~ 125 (248)
T PRK10538 125 N 125 (248)
T ss_pred C
Confidence 4
No 126
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.50 E-value=2.7e-13 Score=78.34 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=66.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCH----HHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTE----KDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+.++..+.+|+++.+++.++++++.+.++ ++|++|||||.... .++.+.+. ++|++++++|+.+++.+++++.|
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 50 GDAVVGVEGDVRSLDDHKEAVARCVAAFG-KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred CCceEEEEeccCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 34577889999999999999999999999 99999999997532 34444443 57999999999999999999999
Q ss_pred HHHhc
Q psy346 80 VCLDF 84 (87)
Q Consensus 80 ~~~~~ 84 (87)
.|.+.
T Consensus 129 ~~~~~ 133 (262)
T TIGR03325 129 ALVAS 133 (262)
T ss_pred HHhhc
Confidence 99764
No 127
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.50 E-value=6.2e-13 Score=76.42 Aligned_cols=80 Identities=24% Similarity=0.269 Sum_probs=71.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|... ..++.+.+.+.|+..+++|+.+++.+++++.+.|.
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (256)
T PRK12745 51 GVEVIFFPADVADLSAHEAMLDAAQAAWG-RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRML 129 (256)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhcC-CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34678899999999999999999999999 9999999999753 24677888899999999999999999999999998
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
++.
T Consensus 130 ~~~ 132 (256)
T PRK12745 130 AQP 132 (256)
T ss_pred hcc
Confidence 653
No 128
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.50 E-value=6.1e-13 Score=76.17 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=70.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++..+.||+++++++..+++++.+.++ ++|++|||+|.... .++.+.+.++|+.++.+|+.+++.+++++.+.|..
T Consensus 51 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06947 51 GGRACVVAGDVANEADVIAMFDAVQSAFG-RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLST 129 (248)
T ss_pred CCcEEEEEeccCCHHHHHHHHHHHHHhcC-CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 44688999999999999999999999898 99999999998644 45778889999999999999999999999998875
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 130 ~ 130 (248)
T PRK06947 130 D 130 (248)
T ss_pred c
Confidence 4
No 129
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.50 E-value=8.7e-13 Score=75.46 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=72.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.+.|+..+++|+.+++.+.+++.+.|.++
T Consensus 55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (250)
T PRK12939 55 GGRAHAIAADLADPASVQRFFDAAAAALG-GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS 133 (250)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 34678899999999999999999999998 99999999998777777888999999999999999999999999998774
No 130
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.49 E-value=6.9e-13 Score=77.91 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|+++.+++..+++++.+.++ ++|++|||+|.... .++.+.+.++|.+.+++|+.+++.+++++.+.|.+
T Consensus 95 ~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~-~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~ 173 (290)
T PRK06701 95 GVKCLLIPGDVSDEAFCKDAVEETVRELG-RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ 173 (290)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 44677899999999999999999999999 99999999998543 56778899999999999999999999999998865
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 174 ~ 174 (290)
T PRK06701 174 G 174 (290)
T ss_pred C
Confidence 3
No 131
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.49 E-value=8.6e-13 Score=76.02 Aligned_cols=79 Identities=23% Similarity=0.230 Sum_probs=71.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.+.|+.++++|+.+++.+++++++.|.++
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (260)
T PRK06198 55 GAKAVFVQADLSDVEDCRRVVAAADEAFG-RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR 133 (260)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 44677889999999999999999999999 99999999998766777788999999999999999999999999999765
No 132
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.49 E-value=1e-12 Score=75.25 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=72.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++++++++++++.+.+.++ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+.+++.+.|.+.
T Consensus 51 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 51 GGNAQAFACDITDRDSVDTAVAAAEQALG-PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 35678899999999999999999999998 99999999998766777788899999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 130 ~ 130 (250)
T TIGR03206 130 G 130 (250)
T ss_pred C
Confidence 4
No 133
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.49 E-value=1.2e-12 Score=74.63 Aligned_cols=76 Identities=25% Similarity=0.191 Sum_probs=67.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|+|+|.....++.+.+.++|+.++++|+.+++.+.+++++.|
T Consensus 47 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 122 (239)
T TIGR01831 47 GGNARLLQFDVADRVACRTLLEADIAEHG-AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPM 122 (239)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45688899999999999999999999999 99999999998766777788999999999999999999999886444
No 134
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.48 E-value=1.1e-12 Score=75.58 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=70.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH-HHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKV-CLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~ 83 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++|||+|.....+..+.+.+.|++.+++|+.+++.+.+++.+. |.+
T Consensus 60 ~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~ 138 (259)
T PRK08213 60 GIDALWIAADVADEADIERLAEETLERFG-HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP 138 (259)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Confidence 34677899999999999999999999998 9999999999866667778889999999999999999999999988 655
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 139 ~ 139 (259)
T PRK08213 139 R 139 (259)
T ss_pred c
Confidence 4
No 135
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.48 E-value=9.8e-13 Score=75.66 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=71.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|+.++++|+.+++.+.+++.+.|.++
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 57 GGAAHVVSLDVTDYQSIKAAVAHAETEAG-TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 34678899999999999999999999999 99999999998766677788889999999999999999999999999766
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
.
T Consensus 136 ~ 136 (258)
T PRK06949 136 A 136 (258)
T ss_pred C
Confidence 4
No 136
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.48 E-value=1.4e-12 Score=74.93 Aligned_cols=79 Identities=22% Similarity=0.236 Sum_probs=70.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+..+.+|+++.+++..+++++.+.++ ++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (252)
T PRK07035 56 GGKAEALACHIGEMEQIDALFAHIRERHG-RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE 134 (252)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 34577889999999999999999999999 9999999998753 356678889999999999999999999999999976
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 135 ~ 135 (252)
T PRK07035 135 Q 135 (252)
T ss_pred C
Confidence 5
No 137
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.48 E-value=3.7e-13 Score=75.14 Aligned_cols=80 Identities=21% Similarity=0.137 Sum_probs=69.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccc--cCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL--KLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
....+...||+.|.++...+++.++++++ .++++|||||+...-.+. +...+..++-+++|+.+|+.++++++|++.
T Consensus 49 ~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~ 127 (245)
T COG3967 49 NPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLL 127 (245)
T ss_pred CcchheeeecccchhhHHHHHHHHHhhCC-chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 35677889999999999999999999999 999999999997654333 344566788899999999999999999999
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
++.
T Consensus 128 ~q~ 130 (245)
T COG3967 128 RQP 130 (245)
T ss_pred hCC
Confidence 873
No 138
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.48 E-value=8.2e-13 Score=77.04 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=62.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+ +.++ ++|++|||||... ..++|++++++|+.+++.+++++.|.|.++
T Consensus 48 ~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g-~id~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 118 (275)
T PRK06940 48 GFDVSTQEVDVSSRESVKALAATA-QTLG-PVTGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG 118 (275)
T ss_pred CCeEEEEEeecCCHHHHHHHHHHH-HhcC-CCCEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC
Confidence 456788999999999999999988 5678 9999999999742 135699999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
|
T Consensus 119 g 119 (275)
T PRK06940 119 G 119 (275)
T ss_pred C
Confidence 4
No 139
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.47 E-value=8.7e-13 Score=75.98 Aligned_cols=78 Identities=15% Similarity=0.057 Sum_probs=68.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++++.+.++ ++|++|||+|......+...+ ++|+..+++|+.+++.+.+.+.|.|.+.
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (258)
T PRK08628 54 QPRAEFVQVDLTDDAQCRDAVEQTVAKFG-RIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS 131 (258)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHhcC-CCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc
Confidence 45678899999999999999999999999 999999999976555554444 8999999999999999999999988654
No 140
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.47 E-value=1.3e-12 Score=75.30 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=70.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH-Hh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC-LD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~ 83 (87)
+.++.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+.+.+.|+..+++|+.+++.+++.+++.| .+
T Consensus 55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 55 GGKAIGVAMDVTNEDAVNAGIDKVAERFG-SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHHcC-CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 44677899999999999999999999999 99999999998766677788889999999999999999999999999 44
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 134 ~ 134 (262)
T PRK13394 134 D 134 (262)
T ss_pred c
Confidence 3
No 141
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.5e-12 Score=75.76 Aligned_cols=79 Identities=16% Similarity=0.263 Sum_probs=71.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|.....+..+.+.+.+++.+++|+.+++.+++++.+.|.++
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 58 GGEAVAFPLDVTDPDSVKSFVAQAEEALG-EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34677889999999999999999999898 99999999998766677788899999999999999999999999988765
No 142
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-12 Score=75.15 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=70.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++..+++.+.+ ++ ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.+.+.|.+.
T Consensus 52 ~~~~~~~~~D~~d~~~~~~~~~~~~~-~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (263)
T PRK09072 52 PGRHRWVVADLTSEAGREAVLARARE-MG-GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ 129 (263)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHh-cC-CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 45678899999999999999999876 78 99999999998766778888999999999999999999999999999776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 130 ~ 130 (263)
T PRK09072 130 P 130 (263)
T ss_pred C
Confidence 3
No 143
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.47 E-value=7e-13 Score=76.86 Aligned_cols=78 Identities=18% Similarity=0.106 Sum_probs=61.5
Q ss_pred CceeeeeccCCChHHH----HHHHHHHHHHcCCCCcEEEecccccCCcccccCCH-----------HHHHHHHHhhhHHH
Q psy346 6 STHLSLPMDVSNTSTI----STAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE-----------KDFQQVFDVNLKLV 70 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~----~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~ 70 (87)
.++..+.+|++|++++ ..+++.+.+.+| ++|++|||||.....++.+.+. ++|.+++++|+.++
T Consensus 52 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g-~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 130 (267)
T TIGR02685 52 NSAVTCQADLSNSATLFSRCEAIIDACFRAFG-RCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAP 130 (267)
T ss_pred CceEEEEccCCCchhhHHHHHHHHHHHHHccC-CceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHH
Confidence 4566789999998755 566666667788 9999999999865544444443 35899999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy346 71 DRRGGTAGKVCLDF 84 (87)
Q Consensus 71 ~~~~~~~~~~~~~~ 84 (87)
+.+++++.+.|...
T Consensus 131 ~~l~~~~~~~~~~~ 144 (267)
T TIGR02685 131 YFLIKAFAQRQAGT 144 (267)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999998653
No 144
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.47 E-value=1.3e-12 Score=75.03 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=72.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|........+.+.++++..+++|+.+++.+.+.+.+.|.+.
T Consensus 52 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (258)
T PRK12429 52 GGKAIGVAMDVTDEEAINAGIDYAVETFG-GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ 130 (258)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999 99999999998777777888999999999999999999999999999775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 131 ~ 131 (258)
T PRK12429 131 G 131 (258)
T ss_pred C
Confidence 4
No 145
>KOG1210|consensus
Probab=99.46 E-value=5.7e-13 Score=78.14 Aligned_cols=78 Identities=19% Similarity=0.269 Sum_probs=74.2
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFGH 86 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 86 (87)
|.++++|+++.+++...++++++..+ ++|.+++|||...++.+.+.+.+.++..+++|+.+.++.+++.++.|++..+
T Consensus 86 v~~~S~d~~~Y~~v~~~~~~l~~~~~-~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~ 163 (331)
T KOG1210|consen 86 VSYKSVDVIDYDSVSKVIEELRDLEG-PIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH 163 (331)
T ss_pred eeEeccccccHHHHHHHHhhhhhccC-CcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc
Confidence 77999999999999999999999999 9999999999998899999999999999999999999999999999988754
No 146
>KOG4169|consensus
Probab=99.46 E-value=3.1e-13 Score=76.34 Aligned_cols=73 Identities=26% Similarity=0.304 Sum_probs=67.0
Q ss_pred CCCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 3 ~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+...+.+++||+++..++++.++++...+| .+|++||+||+.. ..+|++++.+|+.|.+.-+..++|+|.
T Consensus 52 ~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg-~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMd 122 (261)
T KOG4169|consen 52 NPSVSVIFIKCDVTNRGDLEAAFDKILATFG-TIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMD 122 (261)
T ss_pred CCCceEEEEEeccccHHHHHHHHHHHHHHhC-ceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhh
Confidence 3567889999999999999999999999999 9999999999965 355999999999999999999999997
Q ss_pred hc
Q psy346 83 DF 84 (87)
Q Consensus 83 ~~ 84 (87)
++
T Consensus 123 k~ 124 (261)
T KOG4169|consen 123 KK 124 (261)
T ss_pred hh
Confidence 76
No 147
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.9e-12 Score=74.76 Aligned_cols=79 Identities=27% Similarity=0.224 Sum_probs=70.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL-TEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.++.++.+|+++++++..+++.+.+.++ ++|++|||+|.....++.+. +.+.+++.+++|+.+++.+.+.+.+.|.+
T Consensus 49 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 127 (263)
T PRK06181 49 GGEALVVPTDVSDAEACERLIEAAVARFG-GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA 127 (263)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 44677889999999999999999999998 99999999998766667777 88999999999999999999999998865
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 128 ~ 128 (263)
T PRK06181 128 S 128 (263)
T ss_pred c
Confidence 4
No 148
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.46 E-value=2.3e-12 Score=73.75 Aligned_cols=79 Identities=28% Similarity=0.401 Sum_probs=70.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++.++.+|+++++++.++++++.+.++ ++|++|||+|... ..++.+.+.+.|++.+++|+.+++.+.+.+.+.|.++
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (251)
T PRK07231 53 GRAIAVAADVSDEADVEAAVAAALERFG-SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE 131 (251)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 4577899999999999999999999999 9999999999854 3567788899999999999999999999999999765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 132 ~ 132 (251)
T PRK07231 132 G 132 (251)
T ss_pred C
Confidence 3
No 149
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.46 E-value=2e-12 Score=75.29 Aligned_cols=78 Identities=13% Similarity=0.179 Sum_probs=70.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+.+|++|+++++. ++++.+.++ ++|++|||+|........+.+.+++++.+++|+.+++.+.+.+.+.|++.+
T Consensus 54 ~~~~~~~~D~~d~~~~~~-~~~~~~~~~-~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (280)
T PRK06914 54 QNIKVQQLDVTDQNSIHN-FQLVLKEIG-RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK 131 (280)
T ss_pred CceeEEecCCCCHHHHHH-HHHHHHhcC-CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 467888999999999999 899988899 999999999987777777889999999999999999999999999997653
No 150
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.46 E-value=2.3e-12 Score=73.93 Aligned_cols=79 Identities=20% Similarity=0.150 Sum_probs=68.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCC-CcEEEecccccC------CcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRP-PNVLVNCAGITR------DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~-~d~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.++..+.+|+++++++.++++.+.+.+| . +|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 52 DRAIALQADVTDREQVQAMFATATEHFG-KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhC-CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 4577889999999999999999999988 6 999999998632 2457788899999999999999999999999
Q ss_pred HHHHhcC
Q psy346 79 KVCLDFG 85 (87)
Q Consensus 79 ~~~~~~~ 85 (87)
+.|.+++
T Consensus 131 ~~~~~~~ 137 (253)
T PRK08642 131 PGMREQG 137 (253)
T ss_pred HHHHhcC
Confidence 9997653
No 151
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.8e-12 Score=74.48 Aligned_cols=79 Identities=19% Similarity=0.193 Sum_probs=69.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHc------CCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKF------SRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~------g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+..+.++.+|++|++++.++++++.+.+ + ++|++|||+|.....++.+.+.+.|+..+++|+.+++.+++.+.
T Consensus 55 ~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 133 (254)
T PRK12746 55 GGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTS-EIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTL 133 (254)
T ss_pred CCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCC-CccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3467789999999999999999998877 4 69999999998766777888999999999999999999999999
Q ss_pred HHHHhc
Q psy346 79 KVCLDF 84 (87)
Q Consensus 79 ~~~~~~ 84 (87)
+.|.+.
T Consensus 134 ~~~~~~ 139 (254)
T PRK12746 134 PLLRAE 139 (254)
T ss_pred HHhhcC
Confidence 988654
No 152
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.45 E-value=7.1e-13 Score=78.21 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=67.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++.+++.++++++.+.++ ++|++|||||..... ...+.+.++..+.+|+.+++.+++.+++.|++.
T Consensus 66 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~-~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~ 142 (306)
T PRK06197 66 GADVTLQELDLTSLASVRAAADALRAAYP-RIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPV 142 (306)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHhhCC-CCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC
Confidence 34678889999999999999999999999 999999999985432 345667899999999999999999999999875
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 143 ~ 143 (306)
T PRK06197 143 P 143 (306)
T ss_pred C
Confidence 3
No 153
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.45 E-value=2.3e-12 Score=73.87 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=69.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC---CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR---DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
..+..+.+|+++++++..+++.+.+.++ ++|++|||+|... ..++.+.+.+.|++.+++|+.+++.+++++.+.|.
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (250)
T PRK07774 55 GTAIAVQVDVSDPDSAKAMADATVSAFG-GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA 133 (250)
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999 9999999999854 34567788899999999999999999999999987
Q ss_pred hc
Q psy346 83 DF 84 (87)
Q Consensus 83 ~~ 84 (87)
+.
T Consensus 134 ~~ 135 (250)
T PRK07774 134 KR 135 (250)
T ss_pred Hh
Confidence 64
No 154
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.1e-12 Score=73.09 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=62.2
Q ss_pred eeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 10 ~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+.+|++++++++++++. ++ ++|++|+|+|.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++
T Consensus 35 ~~~~D~~~~~~~~~~~~~----~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g 105 (199)
T PRK07578 35 DVQVDITDPASIRALFEK----VG-KVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGG 105 (199)
T ss_pred ceEecCCChHHHHHHHHh----cC-CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 467999999999888765 47 899999999987667788889999999999999999999999999997653
No 155
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=2.3e-12 Score=73.85 Aligned_cols=78 Identities=21% Similarity=0.206 Sum_probs=70.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.+.++..+++|+.+++.+++++.+.|.+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (252)
T PRK06077 56 GEGIGVLADVSTREGCETLAKATIDRYG-VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG 133 (252)
T ss_pred CeeEEEEeccCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC
Confidence 4567889999999999999999999999 99999999998766777788889999999999999999999999998764
No 156
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.44 E-value=2.8e-12 Score=82.54 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=71.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+..+.+|+++++++.++++++.+.+| ++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++
T Consensus 466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g-~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~ 543 (676)
T TIGR02632 466 RAVALKMDVTDEQAVKAAFADVALAYG-GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG 543 (676)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhcC-CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 567789999999999999999999999 999999999987667778888999999999999999999999999998754
No 157
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=4.1e-12 Score=72.54 Aligned_cols=80 Identities=26% Similarity=0.324 Sum_probs=71.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|+++|.....++.+.+.+.+++.+++|+.+++.+.+.+.+.|.++
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (247)
T PRK05565 54 GGDAIAVKADVSSEEDVENLVEQIVEKFG-KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR 132 (247)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34578889999999999999999999999 99999999998765677788999999999999999999999999999766
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 133 ~ 133 (247)
T PRK05565 133 K 133 (247)
T ss_pred C
Confidence 3
No 158
>KOG1209|consensus
Probab=99.44 E-value=4.1e-13 Score=75.54 Aligned_cols=80 Identities=19% Similarity=0.086 Sum_probs=71.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHH-HcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKE-KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~-~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.+...+.+|+++++++..+..+++. ..| .+|.|+||||..=..|..+.+.+..++.|++|++|.+.++|++...+.+.
T Consensus 52 ~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika 130 (289)
T KOG1209|consen 52 FGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA 130 (289)
T ss_pred hCCeeEEeccCChHHHHHHHHHHhhCCCC-ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc
Confidence 3467889999999999999999998 567 99999999999877888999999999999999999999999999777665
Q ss_pred CC
Q psy346 85 GH 86 (87)
Q Consensus 85 ~~ 86 (87)
++
T Consensus 131 KG 132 (289)
T KOG1209|consen 131 KG 132 (289)
T ss_pred cc
Confidence 54
No 159
>KOG1611|consensus
Probab=99.44 E-value=1.6e-12 Score=73.35 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=71.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCC-CCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSR-PPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
..+++.+++|++..+++.++++++.+..|. +++++++|||+... ....+.+.+.|-+.+++|..|+++++|+++|.++
T Consensus 53 d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLk 132 (249)
T KOG1611|consen 53 DSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLK 132 (249)
T ss_pred CCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHH
Confidence 468999999999999999999999988543 89999999998654 5566777888999999999999999999999998
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+..
T Consensus 133 kaa 135 (249)
T KOG1611|consen 133 KAA 135 (249)
T ss_pred HHh
Confidence 764
No 160
>PRK06196 oxidoreductase; Provisional
Probab=99.44 E-value=1.6e-12 Score=77.08 Aligned_cols=75 Identities=9% Similarity=-0.035 Sum_probs=65.8
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+.++.+|+++.++++++++++.+.++ ++|++|||||.... ....+.+.|+..+++|+.+++.+++.++|.|.+++
T Consensus 73 v~~~~~Dl~d~~~v~~~~~~~~~~~~-~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~ 147 (315)
T PRK06196 73 VEVVMLDLADLESVRAFAERFLDSGR-RIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA 147 (315)
T ss_pred CeEEEccCCCHHHHHHHHHHHHhcCC-CCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 67889999999999999999999888 99999999997542 23456678999999999999999999999998764
No 161
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.43 E-value=4.5e-12 Score=72.45 Aligned_cols=79 Identities=29% Similarity=0.338 Sum_probs=70.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG-KVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~ 83 (87)
+.++.++.+|++++++++++++.+.+.++ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++. +.|.+
T Consensus 58 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (249)
T PRK12827 58 GGKALGLAFDVRDFAATRAALDAGVEEFG-RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA 136 (249)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 34677899999999999999999999888 99999999998777778888999999999999999999999999 55544
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
+
T Consensus 137 ~ 137 (249)
T PRK12827 137 R 137 (249)
T ss_pred C
Confidence 3
No 162
>PRK09135 pteridine reductase; Provisional
Probab=99.43 E-value=3.6e-12 Score=72.81 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=70.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+..+.+|+++++++.++++.+.+.++ ++|++|||+|.....++.+.+.++++.++++|+.+++.+.+++.+.|.+.
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 134 (249)
T PRK09135 57 GSAAALQADLLDPDALPELVAACVAAFG-RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ 134 (249)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC
Confidence 3467889999999999999999999999 99999999998766677778889999999999999999999999988664
No 163
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.43 E-value=4.1e-12 Score=72.59 Aligned_cols=79 Identities=23% Similarity=0.181 Sum_probs=70.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc-CCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+..+..+.+|++|+++++++++.+.+.++ ++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++++++.|.+
T Consensus 50 ~~~~~~~~~D~~d~~~i~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 128 (247)
T PRK09730 50 GGKAFVLQADISDENQVVAMFTAIDQHDE-PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMAL 128 (247)
T ss_pred CCeEEEEEccCCCHHHHHHHHHHHHHhCC-CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 34577899999999999999999999898 999999999975 3456778889999999999999999999999999876
Q ss_pred c
Q psy346 84 F 84 (87)
Q Consensus 84 ~ 84 (87)
.
T Consensus 129 ~ 129 (247)
T PRK09730 129 K 129 (247)
T ss_pred c
Confidence 4
No 164
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.43 E-value=5.4e-12 Score=73.35 Aligned_cols=78 Identities=15% Similarity=0.165 Sum_probs=69.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++..+.+|+++++++.++++++.+.++ ++|++|||+|.... .++.+.+.++|..++++|+.+++.+++++.+.|.++
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (276)
T PRK05875 58 GAVRYEPADVTDEDQVARAVDAATAWHG-RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG 136 (276)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4677889999999999999999999999 99999999997533 567788899999999999999999999999999764
No 165
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.42 E-value=3.8e-12 Score=73.42 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=65.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCC----cEEEecccccCCc--cccc-CCHHHHHHHHHhhhHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPP----NVLVNCAGITRDN--WFLK-LTEKDFQQVFDVNLKLVDRRGGTA 77 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~----d~lv~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~~~~~~ 77 (87)
+..+.++.+|++++++++.+++.+.+.+| .. |++|||||..... ...+ .+.++|++++++|+.+++.+++.+
T Consensus 54 ~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g-~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 132 (256)
T TIGR01500 54 GLRVVRVSLDLGAEAGLEQLLKALRELPR-PKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV 132 (256)
T ss_pred CceEEEEEeccCCHHHHHHHHHHHHhccc-cCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 45678899999999999999999988776 53 6899999975432 2333 357899999999999999999999
Q ss_pred HHHHHhc
Q psy346 78 GKVCLDF 84 (87)
Q Consensus 78 ~~~~~~~ 84 (87)
.|.|.++
T Consensus 133 ~~~l~~~ 139 (256)
T TIGR01500 133 LKAFKDS 139 (256)
T ss_pred HHHHhhc
Confidence 9999865
No 166
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.42 E-value=4e-12 Score=72.93 Aligned_cols=75 Identities=29% Similarity=0.333 Sum_probs=68.6
Q ss_pred ceeeeeccCCC-hHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSN-TSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 7 ~v~~~~~D~~~-~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+....+|+++ +++++.+++.+.+.+| ++|++|||||+... .++.+.+.++|++.+.+|+.+++.+++.+.|.|.
T Consensus 58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 134 (251)
T COG1028 58 RAAAVAADVSDDEESVEALVAAAEEEFG-RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK 134 (251)
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh
Confidence 56777899998 9999999999999999 99999999999876 4888999999999999999999999997778776
No 167
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.6e-12 Score=72.98 Aligned_cols=76 Identities=25% Similarity=0.311 Sum_probs=67.4
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.+|++++++++++++++.+.++ ++|++|||+|...+ .++.+.+.+.|++.+++|+.+++.+++.+.|.|.+++
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 131 (255)
T PRK06057 54 LFVPTDVTDEDAVNALFDTAAETYG-SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG 131 (255)
T ss_pred cEEEeeCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC
Confidence 5788999999999999999999988 99999999997543 4566788899999999999999999999999997653
No 168
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.42 E-value=7.6e-12 Score=71.32 Aligned_cols=80 Identities=24% Similarity=0.305 Sum_probs=71.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+.++ ++|++||++|.....++.+.+.++++..+++|+.+++.+.+.+.+.+.+.
T Consensus 55 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 55 GRRAQAVQADVTDKAALEAAVAAAVERFG-RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred CCceEEEECCcCCHHHHHHHHHHHHHHcC-CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34577889999999999999999998888 99999999998766777788899999999999999999999999998775
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 134 ~ 134 (249)
T PRK12825 134 R 134 (249)
T ss_pred C
Confidence 4
No 169
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.41 E-value=8e-12 Score=71.95 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=71.1
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++..+.+|+++++++.++++++.+.++ ++|++|||+|.....++.+.+.++|...+.+|+.+++.+.+++.+.|.+++
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 127 (257)
T PRK07074 49 ARFVPVACDLTDAASLAAALANAAAERG-PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS 127 (257)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 4577889999999999999999999998 999999999987666777888999999999999999999999999987654
No 170
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.40 E-value=9.6e-12 Score=70.71 Aligned_cols=79 Identities=30% Similarity=0.482 Sum_probs=70.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|++++++++++++.+.+.++ ++|++||++|.....++.+.+.+.++..+++|+.+++.+.+.+.+.+.+.
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (239)
T TIGR01830 47 GVKALGVVCDVSDREDVKAVVEEIEEELG-PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ 125 (239)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34577899999999999999999999999 99999999998766667788889999999999999999999999988654
No 171
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.40 E-value=3.7e-12 Score=72.53 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=62.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC------cccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD------NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++.++++|++++++++++ .+.++ ++|++|||+|.... .++.+.+.+.|++.+.+|+.+++.+++.+.|
T Consensus 43 ~~~~~~~~Dls~~~~~~~~----~~~~~-~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 117 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQL----SEQFT-QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP 117 (235)
T ss_pred CceEEEEecCCCHHHHHHH----HHhcC-CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4677899999999988774 34567 99999999998642 3566788899999999999999999999999
Q ss_pred HHHhcC
Q psy346 80 VCLDFG 85 (87)
Q Consensus 80 ~~~~~~ 85 (87)
.|.+++
T Consensus 118 ~~~~~~ 123 (235)
T PRK09009 118 KLKQSE 123 (235)
T ss_pred hccccC
Confidence 997653
No 172
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.40 E-value=1.1e-11 Score=70.97 Aligned_cols=79 Identities=24% Similarity=0.273 Sum_probs=71.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
..+..+.+|+++++++.++++.+.+.++ ++|++||++|.....++.+.+.++++..+++|+.+++.+.+++.+.|.+++
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 133 (251)
T PRK12826 55 GKARARQVDVRDRAALKAAVAAGVEDFG-RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG 133 (251)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 4577889999999999999999999999 999999999987777777888999999999999999999999999987653
No 173
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=1.1e-11 Score=70.93 Aligned_cols=79 Identities=29% Similarity=0.390 Sum_probs=68.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCccc---------ccCCHHHHHHHHHhhhHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWF---------LKLTEKDFQQVFDVNLKLVDRRGG 75 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~ 75 (87)
+.++..+.+|+++++++.++++.+.+.++ ++|++|||+|....... .+.+.+.|+.++++|+.+++.+.+
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (253)
T PRK08217 53 GTEVRGYAANVTDEEDVEATFAQIAEDFG-QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR 131 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 45677899999999999999999988888 99999999997543221 567789999999999999999999
Q ss_pred HHHHHHHhc
Q psy346 76 TAGKVCLDF 84 (87)
Q Consensus 76 ~~~~~~~~~ 84 (87)
.+.+.|.++
T Consensus 132 ~~~~~l~~~ 140 (253)
T PRK08217 132 EAAAKMIES 140 (253)
T ss_pred HHHHHHHhc
Confidence 999999765
No 174
>PRK06720 hypothetical protein; Provisional
Probab=99.39 E-value=7.4e-12 Score=68.67 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=63.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
+.....+.+|+++.++++++++++.+.+| ++|++|||||.... .++.+.+.++ ++ .+|+.+.+..++.+.++|.+
T Consensus 64 ~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G-~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 139 (169)
T PRK06720 64 GGEALFVSYDMEKQGDWQRVISITLNAFS-RIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMK 139 (169)
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHh
Confidence 44567789999999999999999999999 99999999998764 4555555555 34 67788889999999999988
Q ss_pred cCC
Q psy346 84 FGH 86 (87)
Q Consensus 84 ~~~ 86 (87)
++.
T Consensus 140 ~~~ 142 (169)
T PRK06720 140 QQE 142 (169)
T ss_pred cCC
Confidence 764
No 175
>PRK08324 short chain dehydrogenase; Validated
Probab=99.39 E-value=9.3e-12 Score=80.24 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=72.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+..+.+|+++++++.++++.+.+.+| ++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++.+.|++++
T Consensus 471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g-~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 548 (681)
T PRK08324 471 RALGVACDVTDEAAVQAAFEEAALAFG-GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG 548 (681)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 677889999999999999999999999 999999999998778888899999999999999999999999999998854
No 176
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.38 E-value=8e-12 Score=79.92 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=68.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccC--CHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL--TEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.++..+.+|++++++++++++.+.+.+| ++|++|||||......+.+. +.+++++++++|+.+++.++++++|.|+
T Consensus 419 ~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 419 GGTAHAYTCDLTDSAAVDHTVKDILAEHG-HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45688899999999999999999999999 99999999998644433332 2578999999999999999999999998
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+++
T Consensus 498 ~~~ 500 (657)
T PRK07201 498 ERR 500 (657)
T ss_pred hcC
Confidence 764
No 177
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.38 E-value=1.2e-11 Score=70.37 Aligned_cols=77 Identities=25% Similarity=0.234 Sum_probs=69.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
.++..+.+|+++++++..+++.+.+.++ ++|++||++|.....++.+.+.+++++.+++|+.+++.+.+++.+.|.+
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (237)
T PRK07326 54 GNVLGLAADVRDEADVQRAVDAIVAAFG-GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR 130 (237)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999999998 9999999999876677778899999999999999999999999998843
No 178
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.4e-11 Score=71.11 Aligned_cols=77 Identities=16% Similarity=0.102 Sum_probs=63.0
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+++++.+|+++++++.++++.+.+ .+ ++|++|+|+|......-...+.+...+++++|+.+++.+++.+.|.|.+++
T Consensus 61 ~v~~~~~D~~~~~~~~~~~~~~~~-~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~ 137 (253)
T PRK07904 61 SVEVIDFDALDTDSHPKVIDAAFA-GG-DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG 137 (253)
T ss_pred ceEEEEecCCChHHHHHHHHHHHh-cC-CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC
Confidence 678899999999999999999886 57 999999999986432212224455667899999999999999999998765
No 179
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.37 E-value=2.3e-11 Score=69.32 Aligned_cols=80 Identities=30% Similarity=0.375 Sum_probs=71.6
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+...++ ++|++||++|.....+..+.+.++++..++.|+.+++.+.+++.+.|.+.
T Consensus 53 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 131 (246)
T PRK05653 53 GGEARVLVFDVSDEAAVRALIEAAVEAFG-ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA 131 (246)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45677888999999999999999998889 99999999998766677788899999999999999999999999998765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 132 ~ 132 (246)
T PRK05653 132 R 132 (246)
T ss_pred C
Confidence 4
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.37 E-value=1.1e-11 Score=76.56 Aligned_cols=73 Identities=22% Similarity=0.283 Sum_probs=67.1
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
..+.+|+++++++.++++.+.+.++ ++|++|||+|+.....+.+.+.+.|+.++++|+.+++.+.+++.+.+.
T Consensus 259 ~~~~~Dv~~~~~~~~~~~~~~~~~g-~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 331 (450)
T PRK08261 259 TALALDITAPDAPARIAEHLAERHG-GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA 331 (450)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHhCC-CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 5678999999999999999999998 999999999988777788999999999999999999999999998543
No 181
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.37 E-value=2.4e-11 Score=69.75 Aligned_cols=80 Identities=20% Similarity=0.231 Sum_probs=70.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++..+++.+.+.++ ++|++||++|.....+..+.+.+++++++.+|+.+++.+++.+.+.|.+.
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 127 (255)
T TIGR01963 49 GGSVIYLVADVTKEDEIADMIAAAAAEFG-GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ 127 (255)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHhcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 34677889999999999999999999988 99999999998766666777889999999999999999999999988765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 128 ~ 128 (255)
T TIGR01963 128 G 128 (255)
T ss_pred C
Confidence 3
No 182
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.36 E-value=7.1e-12 Score=71.00 Aligned_cols=78 Identities=22% Similarity=0.310 Sum_probs=70.8
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD----NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
...++||+++.+++.++++++.+.+| ++|++||+.|..+. +.+.+.+.|.|...+++...+...+.+++.|.|..
T Consensus 58 ~~v~~cDV~~d~~i~~~f~~i~~~~g-~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ 136 (259)
T COG0623 58 DLVLPCDVTNDESIDALFATIKKKWG-KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN 136 (259)
T ss_pred CeEEecCCCCHHHHHHHHHHHHHhhC-cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC
Confidence 45789999999999999999999999 99999999988653 67788999999999999999999999999999987
Q ss_pred cCC
Q psy346 84 FGH 86 (87)
Q Consensus 84 ~~~ 86 (87)
.|.
T Consensus 137 ggS 139 (259)
T COG0623 137 GGS 139 (259)
T ss_pred CCc
Confidence 553
No 183
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.36 E-value=2.6e-11 Score=69.92 Aligned_cols=78 Identities=23% Similarity=0.240 Sum_probs=69.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc-CCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++..+.+|+++++++..+++++.+.++ ++|++||++|.. ...+....+.++|.+++++|+.+++.+.+.+.+.|...+
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 137 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFG-GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG 137 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 457789999999999999999999999 999999999987 446677888999999999999999999999999886643
No 184
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.36 E-value=2.9e-11 Score=68.96 Aligned_cols=79 Identities=30% Similarity=0.470 Sum_probs=71.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++++.+.++ ++|++||++|.....+..+.+.+.+++.+.+|+.+++.+.+++.+.+.+.
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 54 GGKALAVQGDVSDAESVERAVDEAKAEFG-GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 45677889999999999999999999998 99999999998776777788899999999999999999999999998765
No 185
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.36 E-value=1.2e-11 Score=73.72 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=60.1
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCC-CCcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSR-PPNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.++..+.+|+++ ++...++.+.+.+++ ++|++|||||.... .++.+.+.+++++++++|+.+++.++++++|.|.
T Consensus 104 ~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 181 (320)
T PLN02780 104 TQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGML 181 (320)
T ss_pred cEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 467788999985 233344444444451 46699999998643 4677889999999999999999999999999998
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+++
T Consensus 182 ~~~ 184 (320)
T PLN02780 182 KRK 184 (320)
T ss_pred hcC
Confidence 764
No 186
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.36 E-value=2.2e-11 Score=69.56 Aligned_cols=78 Identities=12% Similarity=0.062 Sum_probs=67.2
Q ss_pred ceeeeeccCCC--hHHHHHHHHHHHHHc-CCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSN--TSTISTAMSAIKEKF-SRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 7 ~v~~~~~D~~~--~~~~~~~~~~~~~~~-g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
.+..+.+|+++ .+++.++++.+.+.+ + ++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++++.|.|.
T Consensus 57 ~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 135 (239)
T PRK08703 57 EPFAIRFDLMSAEEKEFEQFAATIAEATQG-KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLK 135 (239)
T ss_pred CcceEEeeecccchHHHHHHHHHHHHHhCC-CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46678899975 567899999998888 7 89999999997543 5778889999999999999999999999999997
Q ss_pred hcC
Q psy346 83 DFG 85 (87)
Q Consensus 83 ~~~ 85 (87)
+.+
T Consensus 136 ~~~ 138 (239)
T PRK08703 136 QSP 138 (239)
T ss_pred hCC
Confidence 754
No 187
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.35 E-value=2.2e-11 Score=69.21 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=67.2
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.++.+|+++++++.++++++.+.+ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+++.+.|++++
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 118 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE 118 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhC--CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 467899999999999999988775 589999999987777778889999999999999999999999999998764
No 188
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1.4e-11 Score=70.02 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=58.5
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC------cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD------NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
+..+.+|++++++++++++.+. + ++|++|||+|.... .++.+ +.++|++++++|+.+++.+++++.|.|
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~~---~-~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~ 120 (223)
T PRK05884 46 VDAIVCDNTDPASLEEARGLFP---H-HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHL 120 (223)
T ss_pred CcEEecCCCCHHHHHHHHHHHh---h-cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678899999999999887764 3 69999999985321 12333 468999999999999999999999999
Q ss_pred HhcC
Q psy346 82 LDFG 85 (87)
Q Consensus 82 ~~~~ 85 (87)
.+.|
T Consensus 121 ~~~g 124 (223)
T PRK05884 121 RSGG 124 (223)
T ss_pred hcCC
Confidence 7543
No 189
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=4e-11 Score=68.78 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=67.2
Q ss_pred ceeeeeccCC--ChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 7 THLSLPMDVS--NTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 7 ~v~~~~~D~~--~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
++..+.+|++ +++++.++++.+.+.++ ++|++|||||.... .++.+.+.+.|++.+++|+.+++.+.+++.+.|.+
T Consensus 63 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~ 141 (247)
T PRK08945 63 QPAIIPLDLLTATPQNYQQLADTIEEQFG-RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK 141 (247)
T ss_pred CceEEEecccCCCHHHHHHHHHHHHHHhC-CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh
Confidence 4556677775 78899999999999999 99999999998543 56678888999999999999999999999999987
Q ss_pred cC
Q psy346 84 FG 85 (87)
Q Consensus 84 ~~ 85 (87)
++
T Consensus 142 ~~ 143 (247)
T PRK08945 142 SP 143 (247)
T ss_pred CC
Confidence 54
No 190
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.33 E-value=9.5e-12 Score=88.09 Aligned_cols=76 Identities=12% Similarity=0.177 Sum_probs=69.5
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.|.++.++.||++|.+++.++++.+.+. + ++|++|||||+.....+.+.+.++|+++|++|+.|.+.+.+++.+.+
T Consensus 2092 ~G~~v~y~~~DVtD~~av~~av~~v~~~-g-~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~ 2167 (2582)
T TIGR02813 2092 AGASAEYASADVTNSVSVAATVQPLNKT-L-QITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN 2167 (2582)
T ss_pred cCCcEEEEEccCCCHHHHHHHHHHHHHh-C-CCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4667899999999999999999999876 7 89999999999877888999999999999999999999999987755
No 191
>PRK12742 oxidoreductase; Provisional
Probab=99.32 E-value=3.3e-11 Score=68.59 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=60.9
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+..+.+|+++++++.++++ .++ ++|++|||+|.....+..+.+.++|++++++|+.+++.+++.+.+.|.+.
T Consensus 53 ~~~~~~D~~~~~~~~~~~~----~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (237)
T PRK12742 53 ATAVQTDSADRDAVIDVVR----KSG-ALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG 124 (237)
T ss_pred CeEEecCCCCHHHHHHHHH----HhC-CCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC
Confidence 4567899999888777664 357 89999999998766667788899999999999999999999999998654
No 192
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.32 E-value=5.3e-11 Score=68.11 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=67.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.++.+|+++++++.++++.+.+ .+|++|+|+|.....+..+.+.+++.+.+++|+.+++.+.+++.|.|.++
T Consensus 50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (243)
T PRK07102 50 AVAVSTHELDILDTASHAAFLDSLPA----LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR 125 (243)
T ss_pred CCeEEEEecCCCChHHHHHHHHHHhh----cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 45788899999999999999888754 57999999998766667788899999999999999999999999999875
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 126 ~ 126 (243)
T PRK07102 126 G 126 (243)
T ss_pred C
Confidence 4
No 193
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.31 E-value=9e-12 Score=68.93 Aligned_cols=75 Identities=15% Similarity=0.286 Sum_probs=56.8
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+.++.++++|++|++++.++++.+.+.++ +++++||++|.....++.+.+.++++.++...+.+...+.+.+.+
T Consensus 51 ~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~-~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 51 AGARVEYVQCDVTDPEAVAAALAQLRQRFG-PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp TT-EEEEEE--TTSHHHHHHHHHTSHTTSS--EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceeeeccCccCHHHHHHHHHHHHhccC-CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 467899999999999999999999999998 999999999998888999999999999999999999999887753
No 194
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.29 E-value=8.4e-11 Score=66.79 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=68.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.+..+.+|+++.+++..+++.+.+.++ ++|++||++|.....+..+.+.+++++.+.+|+.+++.+++++.+.|.+.
T Consensus 55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 55 ALRIGGIDLVDPQAARRAVDEVNRQFG-RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred CceEEEeecCCHHHHHHHHHHHHHHhC-CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 355677999999999999999999999 99999999998766667778899999999999999999999999998764
No 195
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.29 E-value=4.8e-11 Score=68.28 Aligned_cols=80 Identities=13% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCceeeeeccCCChHHHHHHHHH-HHHHc---CCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSA-IKEKF---SRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~-~~~~~---g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+.++.++.+|+++.+++.+++.+ +.+.+ + ++|++|||+|.... .++.+.+.++|+..+++|+.+++.+++.+.+
T Consensus 44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (243)
T PRK07023 44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA-SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQ 122 (243)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC-CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHH
Confidence 44678899999999999997776 55444 3 79999999998654 5677888999999999999999999999999
Q ss_pred HHHhcC
Q psy346 80 VCLDFG 85 (87)
Q Consensus 80 ~~~~~~ 85 (87)
.|.+++
T Consensus 123 ~~~~~~ 128 (243)
T PRK07023 123 AASDAA 128 (243)
T ss_pred HhhccC
Confidence 997653
No 196
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.28 E-value=6.1e-11 Score=67.46 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=59.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
++..+.+|++++ ++++.+.++ ++|++|||+|.... .++.+.+.++|++++++|+.+++.+++++.+.|.+++
T Consensus 46 ~~~~~~~D~~~~------~~~~~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 118 (235)
T PRK06550 46 NFHFLQLDLSDD------LEPLFDWVP-SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK 118 (235)
T ss_pred cEEEEECChHHH------HHHHHHhhC-CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 467788998876 455556678 99999999997543 5677888999999999999999999999999997653
No 197
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.27 E-value=7.2e-11 Score=64.02 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=65.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.++..+.+|++++++++.+++++...++ ++|.+||++|.....++.+.+.++++.++++|+.+++.+.+++.
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (180)
T smart00822 52 GAEVTVVACDVADRAALAAALAAIPARLG-PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR 124 (180)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcC-CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc
Confidence 44677889999999999999999988888 99999999998766677788899999999999999999998874
No 198
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.26 E-value=6.3e-11 Score=67.22 Aligned_cols=71 Identities=13% Similarity=0.062 Sum_probs=60.5
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
+.+++++.+|+++++++.++++. .+ ++|++|||+|.....++.+.+.+++++++++|+.+++.+++ .+.|.
T Consensus 44 ~~~~~~~~~Dl~~~~~~~~~~~~----~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~ 114 (230)
T PRK07041 44 GAPVRTAALDITDEAAVDAFFAE----AG-PFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA 114 (230)
T ss_pred CCceEEEEccCCCHHHHHHHHHh----cC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc
Confidence 45678889999999998888765 47 89999999998766777888999999999999999999999 44453
No 199
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.26 E-value=7.7e-11 Score=67.63 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=67.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCc----EEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPN----VLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d----~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+.+++++.+|++++++++++++++.+.++ ..+ ++|+|+|...+ .++.+.+.++|.+.+++|+.+++.+++.+.+
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 125 (251)
T PRK06924 47 NSNLTFHSLDLQDVHELETNFNEILSSIQ-EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMK 125 (251)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhcC-cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHH
Confidence 34678899999999999999999887765 322 78999998543 6678889999999999999999999999999
Q ss_pred HHHhc
Q psy346 80 VCLDF 84 (87)
Q Consensus 80 ~~~~~ 84 (87)
.|.+.
T Consensus 126 ~~~~~ 130 (251)
T PRK06924 126 HTKDW 130 (251)
T ss_pred HHhcc
Confidence 99764
No 200
>PRK08017 oxidoreductase; Provisional
Probab=99.24 E-value=2.5e-10 Score=65.63 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=68.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHc-CCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKF-SRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~-g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+..+.+|+++.+++..+++.+.+.. + ++|++++|+|.....++.+.+.+++++.+++|+.|++.+++.+.+.|.+.+
T Consensus 46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~-~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 124 (256)
T PRK08017 46 GFTGILLDLDDPESVERAADEVIALTDN-RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG 124 (256)
T ss_pred CCeEEEeecCCHHHHHHHHHHHHHhcCC-CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 35778999999999999999887754 5 899999999986666777889999999999999999999999999998764
No 201
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.1e-10 Score=66.78 Aligned_cols=75 Identities=19% Similarity=0.069 Sum_probs=62.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++.++.+|+++++++.++++.+. . .+|.+|+|+|.....+..+.+.++|++++++|+.+++.+.+++.|.|.+.
T Consensus 46 ~~~~~~~~D~~~~~~~~~~~~~~~---~-~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 120 (240)
T PRK06101 46 ANIFTLAFDVTDHPGTKAALSQLP---F-IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG 120 (240)
T ss_pred CCCeEEEeeCCCHHHHHHHHHhcc---c-CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 457788999999999999888763 2 57999999987544444567889999999999999999999999998653
No 202
>KOG1199|consensus
Probab=99.22 E-value=7.6e-12 Score=68.62 Aligned_cols=80 Identities=26% Similarity=0.271 Sum_probs=68.7
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC------cccccCCHHHHHHHHHhhhHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD------NWFLKLTEKDFQQVFDVNLKLVDRRGGTA 77 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 77 (87)
.|.++.+.+.|++.+.++..++..++.+|| ++|.+|||||+..- ..-...+.|++++++++|+.|+|..++..
T Consensus 53 lg~~~vf~padvtsekdv~aala~ak~kfg-rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 53 LGGKVVFTPADVTSEKDVRAALAKAKAKFG-RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred hCCceEEeccccCcHHHHHHHHHHHHhhcc-ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 467889999999999999999999999999 99999999997431 22346678999999999999999999988
Q ss_pred HHHHHhc
Q psy346 78 GKVCLDF 84 (87)
Q Consensus 78 ~~~~~~~ 84 (87)
...|-+.
T Consensus 132 aglmg~n 138 (260)
T KOG1199|consen 132 AGLMGEN 138 (260)
T ss_pred hhhhcCC
Confidence 8877543
No 203
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.5e-10 Score=65.67 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=63.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++..+.+|+++++++.++++ + ++|++|||+|.....+..+.+.+.++..+++|+.+++.+.+.+++.|.++
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~------~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 122 (257)
T PRK09291 50 GLALRVEKLDLTDAIDRAQAAE------W-DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR 122 (257)
T ss_pred CCcceEEEeeCCCHHHHHHHhc------C-CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 3457788999999988776542 4 79999999998877788889999999999999999999999999998776
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 123 ~ 123 (257)
T PRK09291 123 G 123 (257)
T ss_pred C
Confidence 4
No 204
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.7e-10 Score=66.54 Aligned_cols=65 Identities=11% Similarity=0.147 Sum_probs=54.1
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+.+|+++.+++. +.++ ++|++|||||.... .+.+.++|++.+++|+.+++.+++++.|.|.++
T Consensus 61 ~~~~~D~~~~~~~~-------~~~~-~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 125 (245)
T PRK12367 61 EWIKWECGKEESLD-------KQLA-SLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNN 125 (245)
T ss_pred eEEEeeCCCHHHHH-------HhcC-CCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 46788999987654 3467 89999999997532 356789999999999999999999999999763
No 205
>PRK08264 short chain dehydrogenase; Validated
Probab=99.21 E-value=4.7e-10 Score=63.95 Aligned_cols=75 Identities=23% Similarity=0.250 Sum_probs=64.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc-cCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI-TRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
..+.++.+|+++++++.++++. ++ ++|++||++|. ....++.+.+.+++...+++|+.+++.+.+++.+.|.+.
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~----~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 123 (238)
T PRK08264 49 PRVVPLQLDVTDPASVAAAAEA----AS-DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN 123 (238)
T ss_pred CceEEEEecCCCHHHHHHHHHh----cC-CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 4678889999999988777654 46 89999999998 555677888999999999999999999999999998765
Q ss_pred C
Q psy346 85 G 85 (87)
Q Consensus 85 ~ 85 (87)
+
T Consensus 124 ~ 124 (238)
T PRK08264 124 G 124 (238)
T ss_pred C
Confidence 3
No 206
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.19 E-value=4.2e-10 Score=64.28 Aligned_cols=73 Identities=27% Similarity=0.377 Sum_probs=62.4
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
+..+.+|+++++++.++++. .+ ++|++|||+|.....+..+.+.++|++.+.+|+.+++.+++++.+.+.+++
T Consensus 55 ~~~~~~D~~~~~~v~~~~~~----~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (245)
T PRK07060 55 CEPLRLDVGDDAAIRAALAA----AG-AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAG 127 (245)
T ss_pred CeEEEecCCCHHHHHHHHHH----hC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 55678999998887776665 46 899999999987666777888999999999999999999999999987654
No 207
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.18 E-value=3.5e-10 Score=64.06 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=61.6
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.++.+|+++.+++.++++.+.. + ++|++|||+|... ..+..+.+.++|+..+++|+.+++.+++++.|.|.+.
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~~~--~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (222)
T PRK06953 46 AEALALDVADPASVAGLAWKLDG--E-ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA 121 (222)
T ss_pred ceEEEecCCCHHHHHHHHHHhcC--C-CCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc
Confidence 45789999999999988776632 4 7999999999863 2455677899999999999999999999999988653
No 208
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.16 E-value=2.6e-10 Score=64.69 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=64.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
++..+.+|+++++++.++++.+.+ + ++|++|||+|.... .++.+.+.++++..+.+|+.+++.+.+++.+.|.+.
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~--~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 122 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQG--Q-RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG 122 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhc--C-CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc
Confidence 466788999999999999988753 5 79999999998633 456788899999999999999999999999988654
No 209
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=6.1e-10 Score=63.43 Aligned_cols=75 Identities=11% Similarity=0.025 Sum_probs=64.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++.+.+|+++++++.++++.+...++ ++|.+++++|.....++.+ .+.++.++++|+.+++.+.+.+.|.|.+.
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (238)
T PRK05786 54 NIHYVVGDVSSTESARNVIEKAAKVLN-AIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEG 128 (238)
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHHhC-CCCEEEEcCCCcCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcC
Confidence 577889999999999999999988888 9999999998754443333 38899999999999999999999988653
No 210
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.15 E-value=1.4e-10 Score=66.56 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=54.2
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++.+|+++.+++.++++++. + ++|++|||||.... +.|+.++++|+.+++.+++.+.|.|.+.
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~---~-~iD~li~nAG~~~~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 89 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALP---G-RIDALFNIAGVPGT--------APVELVARVNFLGLRHLTEALLPRMAPG 89 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhc---C-CCeEEEECCCCCCC--------CCHHHhhhhchHHHHHHHHHHHHhccCC
Confidence 457899999999999988763 6 89999999997521 2478999999999999999999998654
No 211
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.12 E-value=1.4e-09 Score=66.84 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=55.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+..+.+|+++++++.+ .++ ++|++|||||.... .+.+.+++++++++|+.|++.++++++|.|++++
T Consensus 225 ~v~~v~~Dvsd~~~v~~-------~l~-~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~ 292 (406)
T PRK07424 225 PVKTLHWQVGQEAALAE-------LLE-KVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNR 292 (406)
T ss_pred CeEEEEeeCCCHHHHHH-------HhC-CCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35677899999876543 346 89999999997532 3677899999999999999999999999998764
No 212
>KOG1207|consensus
Probab=99.11 E-value=1.4e-11 Score=67.55 Aligned_cols=75 Identities=23% Similarity=0.293 Sum_probs=62.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
..+..+..|+++.+.+.+++... + ++|++|||||+....++.+++.+.+++.|.+|+++++.++|.+.+.+..++
T Consensus 53 ~~I~Pi~~Dls~wea~~~~l~~v----~-pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~ 127 (245)
T KOG1207|consen 53 SLIIPIVGDLSAWEALFKLLVPV----F-PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ 127 (245)
T ss_pred cceeeeEecccHHHHHHHhhccc----C-chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc
Confidence 34677888998766555554443 5 899999999998889999999999999999999999999999888777654
No 213
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.1e-09 Score=60.75 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=63.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFG 85 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 85 (87)
.+.++.+|+++++++.++++. ++ ++|++||++|.....++.+.+.++|.+.+++|+.+++.+.+.+++.|.+++
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~----~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 121 (227)
T PRK08219 48 GATPFPVDLTDPEAIAAAVEQ----LG-RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH 121 (227)
T ss_pred cceEEecCCCCHHHHHHHHHh----cC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 467889999999888777654 45 799999999987666677888999999999999999999999999887653
No 214
>KOG1204|consensus
Probab=99.08 E-value=5.4e-10 Score=63.42 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=63.1
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cc--cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NW--FLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.....|++....+..+++..+.+.| ..+++|||||...+ .. ....+.++|++.|++|+++++.+.+.++|.++++
T Consensus 57 v~~~g~~~e~~~l~al~e~~r~k~g-kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~ 134 (253)
T KOG1204|consen 57 VHVVGDITEEQLLGALREAPRKKGG-KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKS 134 (253)
T ss_pred ceechHHHHHHHHHHHHhhhhhcCC-ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCC
Confidence 3445677777778889999999988 99999999998765 32 3377889999999999999999999999998876
No 215
>KOG1014|consensus
Probab=99.04 E-value=3.3e-10 Score=66.63 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=63.6
Q ss_pred CCceeeeeccCCChHH-HHHHHHHHHHHcCCCCcEEEecccccC--CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTST-ISTAMSAIKEKFSRPPNVLVNCAGITR--DNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~-~~~~~~~~~~~~g~~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
+.+++++.+|.++.+. .+++.+.+.+ . ++.+||||+|+.. +..+.+.+.+.+++.+++|..++..+++.++|.|
T Consensus 98 ~vev~~i~~Dft~~~~~ye~i~~~l~~--~-~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M 174 (312)
T KOG1014|consen 98 KVEVRIIAIDFTKGDEVYEKLLEKLAG--L-DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGM 174 (312)
T ss_pred CcEEEEEEEecCCCchhHHHHHHHhcC--C-ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhh
Confidence 4678999999998765 4444444422 2 6789999999976 5678888888999999999999999999999999
Q ss_pred HhcCC
Q psy346 82 LDFGH 86 (87)
Q Consensus 82 ~~~~~ 86 (87)
.++++
T Consensus 175 ~~r~~ 179 (312)
T KOG1014|consen 175 VERKK 179 (312)
T ss_pred hcCCC
Confidence 88653
No 216
>KOG1478|consensus
Probab=99.04 E-value=8.7e-10 Score=63.74 Aligned_cols=81 Identities=17% Similarity=0.130 Sum_probs=69.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCccc---------------------------ccCCHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWF---------------------------LKLTEK 57 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~---------------------------~~~~~~ 57 (87)
..++.++.+|+++..++.++..++.++|. ++|.+..|||+.+...+ ...+.+
T Consensus 60 ~i~~~yvlvD~sNm~Sv~~A~~di~~rf~-~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D 138 (341)
T KOG1478|consen 60 TIEVTYVLVDVSNMQSVFRASKDIKQRFQ-RLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISAD 138 (341)
T ss_pred eeEEEEEEEehhhHHHHHHHHHHHHHHhh-hccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceeccc
Confidence 46789999999999999999999999999 99999999998653211 244557
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Q psy346 58 DFQQVFDVNLKLVDRRGGTAGKVCLDFGH 86 (87)
Q Consensus 58 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 86 (87)
.+...++.|++|+|++.+.+.|.+.....
T Consensus 139 ~lg~iFetnVFGhfyli~~l~pll~~~~~ 167 (341)
T KOG1478|consen 139 GLGEIFETNVFGHFYLIRELEPLLCHSDN 167 (341)
T ss_pred chhhHhhhcccchhhhHhhhhhHhhcCCC
Confidence 88999999999999999999999877654
No 217
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.04 E-value=6.1e-10 Score=63.82 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=59.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
.++..+.+|+++++++.++++++.+.++ ++|++|||+|..... .. .+...+++|+.+++.+++++.+.|.+.
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~~ 127 (248)
T PRK07806 56 GRASAVGADLTDEESVAALMDTAREEFG-GLDALVLNASGGMES---GM---DEDYAMRLNRDAQRNLARAALPLMPAG 127 (248)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHhCC-CCcEEEECCCCCCCC---CC---CcceeeEeeeHHHHHHHHHHHhhccCC
Confidence 4567889999999999999999999998 999999999864322 11 245678999999999999999988543
No 218
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.73 E-value=3.6e-08 Score=56.49 Aligned_cols=61 Identities=8% Similarity=0.038 Sum_probs=50.9
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHH
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGG 75 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 75 (87)
..+|+++.+++..+++.+.+.++ ++|++|||||+....++.+.+.++|++++.. +.|.+.+
T Consensus 57 ~~~Dv~d~~s~~~l~~~v~~~~g-~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 57 PNLSIREIETTKDLLITLKELVQ-EHDILIHSMAVSDYTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred CcceeecHHHHHHHHHHHHHHcC-CCCEEEECCEeccccchhhCCHHHHhhhcch---hhhhccc
Confidence 35799999999999999999999 9999999999877788889999999988554 4444443
No 219
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.27 E-value=8.5e-06 Score=49.17 Aligned_cols=65 Identities=8% Similarity=0.056 Sum_probs=50.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
++.++.+|++|.+++.++++. . ++|.+||+||.... ..+.++++..+++|+.++..+++++.+.|
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~-----~-~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~ 116 (355)
T PRK10217 52 RFAFEKVDICDRAELARVFTE-----H-QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYW 116 (355)
T ss_pred ceEEEECCCcChHHHHHHHhh-----c-CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhh
Confidence 466778999999888877665 2 69999999987432 22335678899999999999999987653
No 220
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.22 E-value=1.5e-05 Score=49.89 Aligned_cols=66 Identities=9% Similarity=-0.052 Sum_probs=51.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|++|.+.+.++++.. ++|.+||+|+... .+....+.++++..+++|+.+++.+++++..
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~------~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~ 179 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSF------EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE 179 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhC------CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999998888877763 6999999986632 3334445566788899999999999988764
No 221
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.22 E-value=9.7e-06 Score=48.73 Aligned_cols=68 Identities=15% Similarity=-0.032 Sum_probs=51.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLD 83 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 83 (87)
.++.++.+|+++.+++.++++.. .+|.+||+|+...... ..+.....+++|+.++..+.+++.+.+.+
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~------~~d~Vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~ 127 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDI------KPDEVYNLAAQSHVAV----SFEMPDYTADVVATGALRLLEAVRLHGQE 127 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHc------CCCEEEECCcccchhh----hhhChhHHHHHHHHHHHHHHHHHHHhccc
Confidence 35778899999999988887764 5899999999754321 12334667799999999999998877653
No 222
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.16 E-value=7.8e-06 Score=50.28 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=37.4
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
|..+..+.||+++++++.++++.+.+.+| ++|++|||+|..
T Consensus 102 G~~a~~i~~DVss~E~v~~lie~I~e~~G-~IDiLVnSaA~~ 142 (398)
T PRK13656 102 GLYAKSINGDAFSDEIKQKVIELIKQDLG-QVDLVVYSLASP 142 (398)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhcC-CCCEEEECCccC
Confidence 45567889999999999999999999999 999999999875
No 223
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.15 E-value=1.3e-05 Score=48.35 Aligned_cols=66 Identities=8% Similarity=0.043 Sum_probs=49.9
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.++.++.+|++|.+++.++++. . ++|++||+||...... .....+..+++|+.++..+.+++.+.|
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~-----~-~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~ 115 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQ-----H-QPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYW 115 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHh-----c-CCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhc
Confidence 3466788999999988887765 2 6999999998753211 112346679999999999999998765
No 224
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.14 E-value=1.5e-05 Score=47.60 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=48.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.++.++.+|+++++++.+++ . ++|++||+||.... ..+.+.+...+++|+.+++.+++++.+.+
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~-------~-~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~ 119 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAI-------D-GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS 119 (325)
T ss_pred CceEEEeCCCCCchHHHHHH-------c-CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 35778889999988776654 2 58999999986421 22335578899999999999999987653
No 225
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.02 E-value=4.5e-05 Score=46.10 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=47.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
++..+.+|+++.+++.++++.. ++|++||+||.... ..+.+++...+++|+.++..+.+++.
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~------~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~ 114 (349)
T TIGR02622 53 KIEDHFGDIRDAAKLRKAIAEF------KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIR 114 (349)
T ss_pred CceEEEccCCCHHHHHHHHhhc------CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHH
Confidence 4567889999999888877753 68999999985322 23345567889999999999998864
No 226
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.99 E-value=5.6e-05 Score=45.58 Aligned_cols=64 Identities=14% Similarity=-0.023 Sum_probs=47.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
..+..+.+|++|.+++.++++.. ++|.+||+|+....... .+.-...+++|+.++..+.+++.+
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~------~~d~ViH~Aa~~~~~~~----~~~~~~~~~~n~~gt~~ll~a~~~ 118 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEI------KPTEIYNLAAQSHVKVS----FEIPEYTADVDGIGTLRLLEAVRT 118 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhC------CCCEEEECCcccccchh----hhChHHHHHHHHHHHHHHHHHHHH
Confidence 35778899999999888777764 58999999997543211 112245678899999999988775
No 227
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.94 E-value=0.0001 Score=44.28 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=45.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|++|++++.+++ . ++|++||+||.... +..+.++ ...+++|+.++..+++++.+
T Consensus 54 ~~~~v~~Dl~d~~~l~~~~-------~-~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~ 114 (324)
T TIGR03589 54 CLRFFIGDVRDKERLTRAL-------R-GVDYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAID 114 (324)
T ss_pred cEEEEEccCCCHHHHHHHH-------h-cCCEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 5778899999988776653 3 58999999987532 2223332 46899999999999999875
No 228
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.89 E-value=9.4e-05 Score=43.71 Aligned_cols=64 Identities=11% Similarity=0.046 Sum_probs=48.3
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 80 (87)
.+.++.+|+++++++.++++.. ++|++||+++..... ...+..+..+++|+.++..+++++.+.
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~ 114 (317)
T TIGR01181 51 RYRFVKGDIGDRELVSRLFTEH------QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKY 114 (317)
T ss_pred CcEEEEcCCcCHHHHHHHHhhc------CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence 4667889999998888776553 599999999875321 123446678999999999999887654
No 229
>PLN02240 UDP-glucose 4-epimerase
Probab=97.81 E-value=0.00016 Score=43.55 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=47.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.++.++.+|+++++++.++++.. .+|.+||+|+..... .+.+++...+.+|+.++..+.+++.
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~~------~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~ 120 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFAST------RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA 120 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHhC------CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999888776652 699999999875322 1224567789999999999888654
No 230
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=0.00021 Score=42.43 Aligned_cols=58 Identities=19% Similarity=0.307 Sum_probs=45.9
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+|++|++.+.+++.+. ++|++||+|+....... +.+-+..+.+|..++..+.+++..
T Consensus 33 ~~Ditd~~~v~~~i~~~------~PDvVIn~AAyt~vD~a----E~~~e~A~~vNa~~~~~lA~aa~~ 90 (281)
T COG1091 33 ELDITDPDAVLEVIRET------RPDVVINAAAYTAVDKA----ESEPELAFAVNATGAENLARAAAE 90 (281)
T ss_pred cccccChHHHHHHHHhh------CCCEEEECccccccccc----cCCHHHHHHhHHHHHHHHHHHHHH
Confidence 47999999999988886 89999999998654322 122467789999999999988754
No 231
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.65 E-value=0.00069 Score=41.10 Aligned_cols=67 Identities=10% Similarity=-0.001 Sum_probs=46.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcc-cccCCHHHH--HHHHHhhhHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDF--QQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~ 80 (87)
.++.++.+|+++.+++.+++ . .+|.+||+|+...... ....+.+.+ ..+++.|+.++..+.+++.+.
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~-------~-~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~ 127 (353)
T PLN02896 58 DRLRLFRADLQEEGSFDEAV-------K-GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS 127 (353)
T ss_pred CeEEEEECCCCCHHHHHHHH-------c-CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc
Confidence 45778899999987766554 3 5899999998754321 122233333 456788899999999987654
No 232
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.64 E-value=0.0004 Score=44.95 Aligned_cols=59 Identities=12% Similarity=0.191 Sum_probs=44.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|+++.+++.+ .++ ++|++|||+|.... ...++...+.+|+.+...+++++.+
T Consensus 139 ~v~iV~gDLtD~esI~~-------aLg-giDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~ 197 (576)
T PLN03209 139 KLEIVECDLEKPDQIGP-------ALG-NASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATV 197 (576)
T ss_pred ceEEEEecCCCHHHHHH-------Hhc-CCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHH
Confidence 47788999999877643 356 89999999987532 1124677889999999998888654
No 233
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.59 E-value=0.00048 Score=40.85 Aligned_cols=62 Identities=8% Similarity=0.016 Sum_probs=45.4
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+..+.+|+++++++.++++. + ++|++||++|.....+ ..++....+..|+.++..+.+++.
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~-----~-~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~ 109 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEE-----H-KIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ 109 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHh-----C-CCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHH
Confidence 456788999999988877663 4 7999999999753322 222345668889999998887754
No 234
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.49 E-value=0.00093 Score=40.12 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=44.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
++..+.+|+++++++.++++. . ++|.+||+||...... ..+.....+.+|+.++..+.+++.
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~-----~-~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~ 112 (338)
T PRK10675 51 HPTFVEGDIRNEALLTEILHD-----H-AIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR 112 (338)
T ss_pred CceEEEccCCCHHHHHHHHhc-----C-CCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH
Confidence 456678999998887777653 3 6999999998754321 112345678899999998887654
No 235
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=97.45 E-value=0.0026 Score=38.24 Aligned_cols=78 Identities=12% Similarity=0.050 Sum_probs=57.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCC-------------CCcEEEeccccc-CCcccccCCHHHHHHHHHhhhHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSR-------------PPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLKLVD 71 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-------------~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~ 71 (87)
.++.....|..++.++...+....+.+.. .+..+|.-.... ..+|+..++.+.|...++.|+..++
T Consensus 50 ~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~ 129 (299)
T PF08643_consen 50 PDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPI 129 (299)
T ss_pred CCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence 34666777777676666666666655441 133444444433 3478899999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy346 72 RRGGTAGKVCLD 83 (87)
Q Consensus 72 ~~~~~~~~~~~~ 83 (87)
..++.++|+|+.
T Consensus 130 ~~~q~lLPlL~~ 141 (299)
T PF08643_consen 130 LTIQGLLPLLRS 141 (299)
T ss_pred HHHHHHHHHHHh
Confidence 999999999987
No 236
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.45 E-value=0.0011 Score=39.87 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=51.6
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCL 82 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 82 (87)
...++.++++|+.|.+.+.+++.+- .+|.++|=|+-++...- .+.=...+++|+.|++.+.+++.++..
T Consensus 49 ~~~~~~fv~~DI~D~~~v~~~~~~~------~~D~VvhfAAESHVDRS----I~~P~~Fi~TNv~GT~~LLEaar~~~~ 117 (340)
T COG1088 49 DSPRYRFVQGDICDRELVDRLFKEY------QPDAVVHFAAESHVDRS----IDGPAPFIQTNVVGTYTLLEAARKYWG 117 (340)
T ss_pred cCCCceEEeccccCHHHHHHHHHhc------CCCeEEEechhcccccc----ccChhhhhhcchHHHHHHHHHHHHhcc
Confidence 3467899999999988887777664 69999998876654221 122244578999999999999987653
No 237
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=97.38 E-value=0.00098 Score=39.54 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=44.2
Q ss_pred eeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 10 ~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.+|+++++++.++++ +.|+++|.|+...... ....+..+++|+.|+-.+.+++..
T Consensus 49 ~~~~Di~d~~~l~~a~~--------g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~ 105 (280)
T PF01073_consen 49 YIQGDITDPESLEEALE--------GVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARK 105 (280)
T ss_pred EEEeccccHHHHHHHhc--------CCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999988777643 5789999998754332 233577899999999999988764
No 238
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.36 E-value=0.00029 Score=42.03 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=39.4
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 80 (87)
..+.+|++|.+.+..++++. ++|+++|+|+.-+.. +.+.. ..+.+.+|+.|+..+.+++..+
T Consensus 57 ~~vigDvrd~~~l~~~~~~~------~pdiVfHaAA~KhVp-l~E~~---p~eav~tNv~GT~nv~~aa~~~ 118 (293)
T PF02719_consen 57 VPVIGDVRDKERLNRIFEEY------KPDIVFHAAALKHVP-LMEDN---PFEAVKTNVLGTQNVAEAAIEH 118 (293)
T ss_dssp E--CTSCCHHHHHHHHTT--------T-SEEEE------HH-HHCCC---HHHHHHHHCHHHHHHHHHHHHT
T ss_pred CceeecccCHHHHHHHHhhc------CCCEEEEChhcCCCC-hHHhC---HHHHHHHHHHHHHHHHHHHHHc
Confidence 34578999988888877654 799999998874433 33433 4566899999999999888753
No 239
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.32 E-value=0.002 Score=38.88 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=43.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++..+.+|+++++++.+++ . ++|.+||+|+... .. ..+.+...+++|+.++..+++++.+
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~-------~-~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~ 119 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPI-------A-GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAK 119 (338)
T ss_pred ceEEEEcCCCChHHHHHHH-------h-cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999987766543 3 5899999998532 11 1123456789999999999998765
No 240
>PLN02214 cinnamoyl-CoA reductase
Probab=97.29 E-value=0.0015 Score=39.67 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=43.0
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|+++.+++..++ . ++|.+||+|+... +++...+++|+.++..+.+++.+
T Consensus 61 ~~~~~~~Dl~d~~~~~~~~-------~-~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~ 116 (342)
T PLN02214 61 RLILCKADLQDYEALKAAI-------D-GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE 116 (342)
T ss_pred cEEEEecCcCChHHHHHHH-------h-cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999987766554 2 5899999998641 13567789999999999988764
No 241
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.22 E-value=0.0021 Score=38.49 Aligned_cols=60 Identities=13% Similarity=0.029 Sum_probs=43.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++..+.+|+++++++.++++ .+|++||+|+..... . .+.+...+++|+.++..+++++.+
T Consensus 57 ~~~~~~~Dl~~~~~~~~~~~--------~~d~vih~A~~~~~~-~----~~~~~~~~~~nv~gt~~ll~~~~~ 116 (322)
T PLN02986 57 RLKLFKADLLEESSFEQAIE--------GCDAVFHTASPVFFT-V----KDPQTELIDPALKGTINVLNTCKE 116 (322)
T ss_pred ceEEEecCCCCcchHHHHHh--------CCCEEEEeCCCcCCC-C----CCchhhhhHHHHHHHHHHHHHHHh
Confidence 56778899999877665543 589999999864321 1 112356789999999999988654
No 242
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.12 E-value=0.0018 Score=38.52 Aligned_cols=58 Identities=17% Similarity=0.426 Sum_probs=36.6
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+|++|.+++.++++.. ++|++||+||....... + ++-+..+.+|+.++..+.+++..
T Consensus 34 ~~dl~d~~~~~~~~~~~------~pd~Vin~aa~~~~~~c-e---~~p~~a~~iN~~~~~~la~~~~~ 91 (286)
T PF04321_consen 34 DLDLTDPEAVAKLLEAF------KPDVVINCAAYTNVDAC-E---KNPEEAYAINVDATKNLAEACKE 91 (286)
T ss_dssp CS-TTSHHHHHHHHHHH--------SEEEE------HHHH-H---HSHHHHHHHHTHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHh------CCCeEeccceeecHHhh-h---hChhhhHHHhhHHHHHHHHHHHH
Confidence 67899998888888776 79999999988643322 1 22456789999999998887653
No 243
>PLN02778 3,5-epimerase/4-reductase
Probab=97.11 E-value=0.0037 Score=37.31 Aligned_cols=69 Identities=13% Similarity=0.089 Sum_probs=44.5
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.|.++.....|+++.+.+...++. . ++|.+||+||....... +...++-...+++|+.++..+.+++..
T Consensus 32 ~g~~V~~~~~~~~~~~~v~~~l~~-----~-~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~ 100 (298)
T PLN02778 32 QGIDFHYGSGRLENRASLEADIDA-----V-KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRE 100 (298)
T ss_pred CCCEEEEecCccCCHHHHHHHHHh-----c-CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 344565556677777665555443 2 68999999997643211 111123356788999999999888754
No 244
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.02 E-value=0.0051 Score=34.91 Aligned_cols=63 Identities=10% Similarity=0.119 Sum_probs=47.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++..+.+|+.+.+.+.++++.. .+|.++|+++.... ....+.....++.|+.+...+.+++..
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~ 105 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKA------NIDVVIHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAARE 105 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHH------TESEEEEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeecccccccccccccc------CceEEEEeeccccc----ccccccccccccccccccccccccccc
Confidence 5678899999999999888886 69999999987531 111244667788888888888877653
No 245
>PLN02650 dihydroflavonol-4-reductase
Probab=97.00 E-value=0.0045 Score=37.57 Aligned_cols=61 Identities=8% Similarity=-0.057 Sum_probs=43.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKV 80 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 80 (87)
++.++.+|+++.+.+.++++ .+|.+||+|+..... .. +.+...+++|+.++..+++++.+.
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~--------~~d~ViH~A~~~~~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~ 117 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIR--------GCTGVFHVATPMDFE---SK--DPENEVIKPTVNGMLSIMKACAKA 117 (351)
T ss_pred ceEEEEecCCChhhHHHHHh--------CCCEEEEeCCCCCCC---CC--CchhhhhhHHHHHHHHHHHHHHhc
Confidence 46778899998877665542 589999999764211 11 223567899999999999988764
No 246
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.00 E-value=0.0042 Score=37.02 Aligned_cols=58 Identities=22% Similarity=0.177 Sum_probs=40.5
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
..|++|.+.+.++++.. ++|.+||+|+...... .+.+ -+..+.+|+.++..+.+++..
T Consensus 37 ~~Dl~d~~~~~~~~~~~------~~D~Vih~Aa~~~~~~-~~~~---~~~~~~~N~~~~~~l~~aa~~ 94 (299)
T PRK09987 37 CGDFSNPEGVAETVRKI------RPDVIVNAAAHTAVDK-AESE---PEFAQLLNATSVEAIAKAANE 94 (299)
T ss_pred cCCCCCHHHHHHHHHhc------CCCEEEECCccCCcch-hhcC---HHHHHHHHHHHHHHHHHHHHH
Confidence 46999988887776653 6899999998754321 1112 245567899999988887653
No 247
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.00 E-value=0.004 Score=41.00 Aligned_cols=67 Identities=12% Similarity=0.067 Sum_probs=45.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++.+...|++|.+.+.+.+... ++|.+||+|+....... +...++-...+++|+.++..+.+++..
T Consensus 405 ~~v~~~~~~l~d~~~v~~~i~~~------~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~ 471 (668)
T PLN02260 405 IAYEYGKGRLEDRSSLLADIRNV------KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRE 471 (668)
T ss_pred CeEEeeccccccHHHHHHHHHhh------CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHH
Confidence 34444567888888777665553 69999999987542211 112234467788999999999988764
No 248
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.98 E-value=0.004 Score=40.37 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=49.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+..++-+|+.|.+.+..+++.. ++|.++|+|+.-+ -|..+.. ..+.++.|+.|+..+.+++..
T Consensus 302 ~~~~~~igdVrD~~~~~~~~~~~------kvd~VfHAAA~KH-VPl~E~n---P~Eai~tNV~GT~nv~~aa~~ 365 (588)
T COG1086 302 LKLRFYIGDVRDRDRVERAMEGH------KVDIVFHAAALKH-VPLVEYN---PEEAIKTNVLGTENVAEAAIK 365 (588)
T ss_pred cceEEEecccccHHHHHHHHhcC------CCceEEEhhhhcc-CcchhcC---HHHHHHHhhHhHHHHHHHHHH
Confidence 56778889999999888877665 7999999987744 3344443 455688999999999988764
No 249
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.95 E-value=0.0017 Score=37.50 Aligned_cols=47 Identities=9% Similarity=0.089 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHH
Q psy346 22 STAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKL 69 (87)
Q Consensus 22 ~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 69 (87)
....+.+.+.++ .+|++|||||+....+....+.++|..++++|...
T Consensus 69 ~~m~~~l~~~~~-~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~ 115 (229)
T PRK06732 69 DDLLETLEPLVK-DHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL 115 (229)
T ss_pred HHHHHHHHHHhc-CCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence 334445555566 89999999999766666677788899998887554
No 250
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.91 E-value=0.0058 Score=36.47 Aligned_cols=60 Identities=7% Similarity=-0.018 Sum_probs=42.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|+++++.+..++ . ++|.+||+|+..... . .+ .....+++|+.++..+.+++.+
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~-------~-~~d~Vih~A~~~~~~-~--~~--~~~~~~~~nv~gt~~ll~a~~~ 115 (322)
T PLN02662 56 RLHLFKANLLEEGSFDSVV-------D-GCEGVFHTASPFYHD-V--TD--PQAELIDPAVKGTLNVLRSCAK 115 (322)
T ss_pred ceEEEeccccCcchHHHHH-------c-CCCEEEEeCCcccCC-C--CC--hHHHHHHHHHHHHHHHHHHHHh
Confidence 5677889999887765553 3 589999999864321 1 11 1246789999999999988764
No 251
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.84 E-value=0.0081 Score=35.65 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=39.5
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+..|+++++.++.+.+. .++ ++|++||+|+.... ..++....+++|+.++..+.+++..
T Consensus 46 ~~~d~~~~~~~~~~~~~---~~~-~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~ 104 (314)
T TIGR02197 46 IADYIDKEDFLDRLEKG---AFG-KIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE 104 (314)
T ss_pred eeccCcchhHHHHHHhh---ccC-CCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH
Confidence 44566665555544332 345 89999999986432 1234567789999999999887654
No 252
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.71 E-value=0.0073 Score=35.73 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=39.9
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
..+|+++.+++.++++.. ++|++||+|+.......... .-...++.|+.++..+.+++..
T Consensus 31 ~~~Dl~~~~~l~~~~~~~------~~d~Vih~A~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~~~~~ 90 (306)
T PLN02725 31 KELDLTRQADVEAFFAKE------KPTYVILAAAKVGGIHANMT---YPADFIRENLQIQTNVIDAAYR 90 (306)
T ss_pred ccCCCCCHHHHHHHHhcc------CCCEEEEeeeeecccchhhh---CcHHHHHHHhHHHHHHHHHHHH
Confidence 357888888777765552 68999999987532111111 1234577899999888887654
No 253
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.69 E-value=0.01 Score=34.84 Aligned_cols=57 Identities=25% Similarity=0.350 Sum_probs=40.7
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+|+.+++++.++++.. .+|.+||++|...... .....+..+++|+.++..+.+++.
T Consensus 33 ~~d~~~~~~~~~~~~~~------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~ 89 (287)
T TIGR01214 33 QLDLTDPEALERLLRAI------RPDAVVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAA 89 (287)
T ss_pred ccCCCCHHHHHHHHHhC------CCCEEEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHH
Confidence 46888888887776542 6899999998753221 112345678899999999888764
No 254
>PLN02583 cinnamoyl-CoA reductase
Probab=96.67 E-value=0.013 Score=34.83 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=43.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.++.++.+|+++.+++..+ +. ..|.+++.++.... .+ .+++.++++|+.+++.+++++.+.+
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~-------l~-~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~ 118 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDA-------LK-GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD 118 (297)
T ss_pred CceEEEEecCCCHHHHHHH-------Hc-CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3577888999998776533 23 57788876543211 11 2367899999999999999988753
No 255
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.01 Score=33.04 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=34.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
..+..+.+|++|++++.++++.+.+.+| ++|.+|+.+-..
T Consensus 47 ~~i~~~~~Dv~d~~sv~~~i~~~l~~~g-~id~lv~~vh~~ 86 (177)
T PRK08309 47 ESITPLPLDYHDDDALKLAIKSTIEKNG-PFDLAVAWIHSS 86 (177)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcC-CCeEEEEecccc
Confidence 4577788999999999999999999888 999998776443
No 256
>KOG1371|consensus
Probab=96.58 E-value=0.01 Score=36.15 Aligned_cols=65 Identities=6% Similarity=0.026 Sum_probs=49.0
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+..+.++..|++|.+.++++++.. .+|.++|=|+.-..+.-.+.+ .+.++.|+.+.+.+.....
T Consensus 52 ~~~~v~f~~~Dl~D~~~L~kvF~~~------~fd~V~Hfa~~~~vgeS~~~p----~~Y~~nNi~gtlnlLe~~~ 116 (343)
T KOG1371|consen 52 EGKSVFFVEGDLNDAEALEKLFSEV------KFDAVMHFAALAAVGESMENP----LSYYHNNIAGTLNLLEVMK 116 (343)
T ss_pred CCCceEEEEeccCCHHHHHHHHhhc------CCceEEeehhhhccchhhhCc----hhheehhhhhHHHHHHHHH
Confidence 3578899999999999988888876 699999998875443222222 5667889999988877644
No 257
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.51 E-value=0.025 Score=37.40 Aligned_cols=63 Identities=6% Similarity=-0.046 Sum_probs=43.1
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.++.++.+|+++.+.+..++.. . ++|++||+|+...... ...+-...+++|+.++..+.+++.
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~-----~-~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~ 119 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLIT-----E-GIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK 119 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhh-----c-CCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHH
Confidence 3577888999998776554322 3 6999999998754321 111224567899999988887764
No 258
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.48 E-value=0.02 Score=34.11 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=42.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+..+.+|+++.+++.+++ . .+|++||+++..... .+.+...+++|+.++..+.+++.+
T Consensus 44 ~~~~~~~D~~~~~~l~~~~-------~-~~d~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~ 102 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAV-------A-GCRALFHVAADYRLW------APDPEEMYAANVEGTRNLLRAALE 102 (328)
T ss_pred CceEEEeeCCCHHHHHHHH-------h-CCCEEEEeceecccC------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999987765543 3 589999999753211 123566788999999999887764
No 259
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.42 E-value=0.022 Score=35.42 Aligned_cols=60 Identities=10% Similarity=0.178 Sum_probs=40.1
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
..+..+.+|++|++++.++++.. .+ ++|++|||+|...... ...+++|+.+...+.+++.
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~---~~-~~D~Vi~~aa~~~~~~---------~~~~~vn~~~~~~ll~aa~ 170 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSE---GD-PVDVVVSCLASRTGGV---------KDSWKIDYQATKNSLDAGR 170 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHh---CC-CCcEEEECCccCCCCC---------ccchhhHHHHHHHHHHHHH
Confidence 35778899999999988887654 22 6999999987532111 1224567777666666543
No 260
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.29 E-value=0.023 Score=33.79 Aligned_cols=61 Identities=8% Similarity=0.072 Sum_probs=38.1
Q ss_pred eccCCChHHHHHHHHHHHH--HcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 12 PMDVSNTSTISTAMSAIKE--KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~--~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+|++|..+...+++.+.+ .++ ++|.+||+||...... .+. ...++.|+.++..+.+++..
T Consensus 44 ~~~~~d~~~~~~~~~~~~~~~~~~-~~d~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~ 106 (308)
T PRK11150 44 DLDIADYMDKEDFLAQIMAGDDFG-DIEAIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE 106 (308)
T ss_pred hhhhhhhhhHHHHHHHHhcccccC-CccEEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH
Confidence 4566655555555554432 235 7999999998643221 122 34689999999888887653
No 261
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.17 E-value=0.036 Score=33.66 Aligned_cols=61 Identities=8% Similarity=-0.088 Sum_probs=45.3
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.++..|+.|.+.+.+++++- ++|.+||-||....+.-.+. =.+.++-|+.++..+.++..
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~------~idaViHFAa~~~VgESv~~----Pl~Yy~NNv~gTl~Ll~am~ 106 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEEN------KIDAVVHFAASISVGESVQN----PLKYYDNNVVGTLNLIEAML 106 (329)
T ss_pred CceEEeccccHHHHHHHHHhc------CCCEEEECccccccchhhhC----HHHHHhhchHhHHHHHHHHH
Confidence 578899999988888877764 79999999987544322222 24457889999998888754
No 262
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.15 E-value=0.047 Score=33.28 Aligned_cols=61 Identities=8% Similarity=-0.078 Sum_probs=41.5
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|+++.+.+..++ . .+|.+||.|+..... ....+ -...+++|+.++..+.+++..
T Consensus 70 ~~~~~~~Di~d~~~l~~~~-------~-~~d~ViHlAa~~~~~-~~~~~---~~~~~~~Nv~gt~nll~~~~~ 130 (348)
T PRK15181 70 RFIFIQGDIRKFTDCQKAC-------K-NVDYVLHQAALGSVP-RSLKD---PIATNSANIDGFLNMLTAARD 130 (348)
T ss_pred ceEEEEccCCCHHHHHHHh-------h-CCCEEEECccccCch-hhhhC---HHHHHHHHHHHHHHHHHHHHH
Confidence 4667889999876655443 2 589999999874321 11112 234688999999999887653
No 263
>PLN02427 UDP-apiose/xylose synthase
Probab=96.06 E-value=0.054 Score=33.42 Aligned_cols=60 Identities=8% Similarity=-0.018 Sum_probs=39.3
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
++.++.+|++|.+.+.+++ . .+|.+||+|+......... +. ...+..|+.+...+.+++.
T Consensus 66 ~~~~~~~Dl~d~~~l~~~~-------~-~~d~ViHlAa~~~~~~~~~-~~---~~~~~~n~~gt~~ll~aa~ 125 (386)
T PLN02427 66 RIQFHRINIKHDSRLEGLI-------K-MADLTINLAAICTPADYNT-RP---LDTIYSNFIDALPVVKYCS 125 (386)
T ss_pred CeEEEEcCCCChHHHHHHh-------h-cCCEEEEcccccChhhhhh-Ch---HHHHHHHHHHHHHHHHHHH
Confidence 5778889999887765543 2 5799999998753322211 11 2234568888888777654
No 264
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=95.52 E-value=0.031 Score=32.50 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=34.5
Q ss_pred CCceeeeeccCCChHH-H-HHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTST-I-STAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~-~-~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
..+++.+.+|++++.- + ....+.+.+ .+|++||||+...... .++...++|+.|+..+.+.+.
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~----~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~ 123 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAE----EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA 123 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHH----H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT
T ss_pred hccEEEEeccccccccCCChHHhhcccc----ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH
Confidence 5689999999998641 1 122233322 6899999998754321 134456789999988887665
No 265
>PLN02503 fatty acyl-CoA reductase 2
Probab=95.00 E-value=0.2 Score=33.28 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=42.5
Q ss_pred CceeeeeccCCChHH-H-HHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTST-I-STAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~-~-~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++..+..|++++.- + ....+.+. . .+|++||+|+..... +..+..+.+|+.++..+.+.+..
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~---~-~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~ 256 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIA---K-EVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKK 256 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHH---h-cCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHH
Confidence 468889999998720 0 11112222 2 689999999875421 33677889999999999887653
No 266
>PRK05865 hypothetical protein; Provisional
Probab=94.94 E-value=0.17 Score=34.87 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=36.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+.++.+|+++.+++.++++ .+|.+||+|+.... .+++|+.++..+.+++.
T Consensus 41 ~v~~v~gDL~D~~~l~~al~--------~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~ 91 (854)
T PRK05865 41 SADFIAADIRDATAVESAMT--------GADVVAHCAWVRGR-------------NDHINIDGTANVLKAMA 91 (854)
T ss_pred CceEEEeeCCCHHHHHHHHh--------CCCEEEECCCcccc-------------hHHHHHHHHHHHHHHHH
Confidence 46678899999887765542 58999999976321 35778888877766543
No 267
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=94.84 E-value=0.27 Score=29.94 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=38.5
Q ss_pred ceeeeeccCC-ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVS-NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~-~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+.++.+|++ +.+.+.++ .. ++|++||+|+...+..... +-+..+++|+.+...+.+++.+
T Consensus 47 ~~~~~~~Dl~~~~~~~~~~-------~~-~~d~ViH~aa~~~~~~~~~----~p~~~~~~n~~~~~~ll~aa~~ 108 (347)
T PRK11908 47 RMHFFEGDITINKEWIEYH-------VK-KCDVILPLVAIATPATYVK----QPLRVFELDFEANLPIVRSAVK 108 (347)
T ss_pred CeEEEeCCCCCCHHHHHHH-------Hc-CCCEEEECcccCChHHhhc----CcHHHHHHHHHHHHHHHHHHHh
Confidence 4677888997 44433322 23 6899999998743321111 2245678899988888777653
No 268
>PLN02996 fatty acyl-CoA reductase
Probab=94.83 E-value=0.25 Score=31.89 Aligned_cols=62 Identities=18% Similarity=0.128 Sum_probs=41.3
Q ss_pred CceeeeeccCCChH----HHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTS----TISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~----~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++..+.+|++++. + ....+.+. . .+|++||+|+..... +..+..+.+|+.|+..+.+++..
T Consensus 84 ~kv~~i~GDl~~~~LGLs~-~~~~~~l~---~-~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~ 149 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKD-SNLREEMW---K-EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKK 149 (491)
T ss_pred cCEEEEecccCCcCCCCCh-HHHHHHHH---h-CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 46888999998542 1 11122222 2 689999999875421 23566889999999988877653
No 269
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=94.32 E-value=0.33 Score=29.28 Aligned_cols=63 Identities=8% Similarity=0.013 Sum_probs=40.3
Q ss_pred CceeeeeccCCChHH-H-HHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTST-I-STAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~-~-~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++..+.+|++++.. + ......+ .. .+|.+|||++..... ..++..+.+|+.++..+.+.+..
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~---~~-~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~ 125 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERL---AE-NVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS 125 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHH---Hh-hCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh
Confidence 467888899886531 0 1111222 24 799999999875321 12456778999999888877653
No 270
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=94.23 E-value=0.14 Score=32.20 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=26.4
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcc
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW 50 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~ 50 (87)
..+|+++.+++.+.+. +.++ ++|++|+|||+....+
T Consensus 247 ~~~dv~~~~~~~~~v~---~~~~-~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 247 KRIDVESAQEMLDAVL---AALP-QADIFIMAAAVADYRP 282 (399)
T ss_pred EEEccCCHHHHHHHHH---HhcC-CCCEEEEccccccccc
Confidence 3568887777666554 5578 9999999999865443
No 271
>KOG1502|consensus
Probab=94.17 E-value=0.42 Score=29.43 Aligned_cols=62 Identities=10% Similarity=-0.012 Sum_probs=44.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
+.+.+.+..|+.+++++..+++ +.|+++|.|......... --.++++..+.|+..+.+++.+
T Consensus 56 ~~~l~l~~aDL~d~~sf~~ai~--------gcdgVfH~Asp~~~~~~~-----~e~~li~pav~Gt~nVL~ac~~ 117 (327)
T KOG1502|consen 56 KERLKLFKADLLDEGSFDKAID--------GCDGVFHTASPVDFDLED-----PEKELIDPAVKGTKNVLEACKK 117 (327)
T ss_pred cccceEEeccccccchHHHHHh--------CCCEEEEeCccCCCCCCC-----cHHhhhhHHHHHHHHHHHHHhc
Confidence 3457889999999988776643 589999998765433211 1236788889999888887654
No 272
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.09 E-value=0.25 Score=29.30 Aligned_cols=62 Identities=11% Similarity=0.013 Sum_probs=39.3
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCC-cEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPP-NVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+..+.+|+++.+....+.+ .. |.+||+++......... + .....+.+|+.++..+.+++..
T Consensus 43 ~~~~~~~d~~~~~~~~~~~~--------~~~d~vih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa~~ 105 (314)
T COG0451 43 GVEFVVLDLTDRDLVDELAK--------GVPDAVIHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAARA 105 (314)
T ss_pred ccceeeecccchHHHHHHHh--------cCCCEEEEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778777633222221 33 99999998864332111 1 3455788999999999988765
No 273
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=94.05 E-value=0.35 Score=32.32 Aligned_cols=62 Identities=13% Similarity=0.042 Sum_probs=39.9
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++.++.+|+++.... ++.+ +. ++|++||.|+......... + -...+++|+.+...+.+++..
T Consensus 361 ~~~~~~gDl~d~~~~---l~~~---l~-~~D~ViHlAa~~~~~~~~~-~---~~~~~~~Nv~~t~~ll~a~~~ 422 (660)
T PRK08125 361 RFHFVEGDISIHSEW---IEYH---IK-KCDVVLPLVAIATPIEYTR-N---PLRVFELDFEENLKIIRYCVK 422 (660)
T ss_pred ceEEEeccccCcHHH---HHHH---hc-CCCEEEECccccCchhhcc-C---HHHHHHhhHHHHHHHHHHHHh
Confidence 467778899875542 1221 23 6899999998754322111 1 234678999999888877654
No 274
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.87 E-value=0.63 Score=28.82 Aligned_cols=60 Identities=12% Similarity=-0.038 Sum_probs=37.4
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+..+.+|+++.+.+..++ . ++|.+||+|+........... ....+..|+.++..+.+++.
T Consensus 66 ~~~~~~Dl~d~~~~~~~~-------~-~~D~Vih~Aa~~~~~~~~~~~---~~~~~~~N~~~t~nll~aa~ 125 (370)
T PLN02695 66 HEFHLVDLRVMENCLKVT-------K-GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAAR 125 (370)
T ss_pred ceEEECCCCCHHHHHHHH-------h-CCCEEEEcccccCCccccccC---chhhHHHHHHHHHHHHHHHH
Confidence 355678888876554432 2 589999999864322221111 23346678888888887764
No 275
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.28 E-value=0.54 Score=27.29 Aligned_cols=57 Identities=12% Similarity=0.011 Sum_probs=33.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHc-CCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKF-SRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~-g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+.++.+|+++.. ..+ .+.+ . ++|++|+++|....... . ..+++|..++..+++++.
T Consensus 63 ~~~~~~~Dl~d~~--~~l----~~~~~~-~~d~vi~~~g~~~~~~~----~----~~~~~n~~~~~~ll~a~~ 120 (251)
T PLN00141 63 SLQIVRADVTEGS--DKL----VEAIGD-DSDAVICATGFRRSFDP----F----APWKVDNFGTVNLVEACR 120 (251)
T ss_pred ceEEEEeeCCCCH--HHH----HHHhhc-CCCEEEECCCCCcCCCC----C----CceeeehHHHHHHHHHHH
Confidence 5778889998731 122 2222 3 69999999886422110 0 113567777777777653
No 276
>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=92.72 E-value=0.47 Score=27.73 Aligned_cols=40 Identities=18% Similarity=0.171 Sum_probs=29.5
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccc
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG 44 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag 44 (87)
.|.....+..|.-..+--++.++.+++.+| .+|.+|++-+
T Consensus 21 ~Gl~a~~ingDAFS~e~K~~vI~~Ik~~~G-~vDLvVYSLA 60 (237)
T PF12241_consen 21 AGLYAKSINGDAFSDEMKEQVIELIKEDFG-KVDLVVYSLA 60 (237)
T ss_dssp TT--EEEEES-TTSHHHHHHHHHHHHHHTS--EEEEEE---
T ss_pred CCCeeeecccccCCHHHHHHHHHHHHHhcC-CccEEEEecc
Confidence 455677888999988889999999999999 9999998754
No 277
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.58 E-value=0.33 Score=32.04 Aligned_cols=62 Identities=11% Similarity=0.021 Sum_probs=38.7
Q ss_pred CceeeeeccCCChHH--HHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTST--ISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~--~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.++..+.+|+++++. ....++.+ . ++|.+||+||...... + .....++|+.++..+.+++..
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----~-~~D~Vih~Aa~~~~~~----~---~~~~~~~nv~gt~~ll~~a~~ 114 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL----G-DIDHVVHLAAIYDLTA----D---EEAQRAANVDGTRNVVELAER 114 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh----c-CCCEEEECceeecCCC----C---HHHHHHHHhHHHHHHHHHHHh
Confidence 356778889887531 01112222 4 7999999998753221 1 244568899998888776543
No 278
>KOG1221|consensus
Probab=92.50 E-value=0.29 Score=31.53 Aligned_cols=67 Identities=10% Similarity=0.081 Sum_probs=42.6
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 81 (87)
.++..+.+|++++.-=-+..+.. .... .+++++|+|+..... |.++..+.+|.+|+..+.+.+....
T Consensus 79 ~Kv~pi~GDi~~~~LGis~~D~~-~l~~-eV~ivih~AAtvrFd-------e~l~~al~iNt~Gt~~~l~lak~~~ 145 (467)
T KOG1221|consen 79 EKVVPIAGDISEPDLGISESDLR-TLAD-EVNIVIHSAATVRFD-------EPLDVALGINTRGTRNVLQLAKEMV 145 (467)
T ss_pred ecceeccccccCcccCCChHHHH-HHHh-cCCEEEEeeeeeccc-------hhhhhhhhhhhHhHHHHHHHHHHhh
Confidence 45677778877653111111111 1123 799999999875432 4477889999999999887766543
No 279
>PLN02686 cinnamoyl-CoA reductase
Probab=92.24 E-value=1.3 Score=27.47 Aligned_cols=32 Identities=3% Similarity=0.089 Sum_probs=23.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.+.++.+|+++.+++.++++ .+|.++|.++..
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~--------~~d~V~hlA~~~ 139 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFD--------GCAGVFHTSAFV 139 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHH--------hccEEEecCeee
Confidence 47788899999888776654 356777877764
No 280
>CHL00194 ycf39 Ycf39; Provisional
Probab=92.24 E-value=0.62 Score=28.09 Aligned_cols=55 Identities=7% Similarity=-0.021 Sum_probs=33.6
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+.++.+|++|++++.+++ . ++|.+||+++..... .....++|+.+...+.+++.
T Consensus 44 ~v~~v~~Dl~d~~~l~~al-------~-g~d~Vi~~~~~~~~~---------~~~~~~~~~~~~~~l~~aa~ 98 (317)
T CHL00194 44 GAELVYGDLSLPETLPPSF-------K-GVTAIIDASTSRPSD---------LYNAKQIDWDGKLALIEAAK 98 (317)
T ss_pred CCEEEECCCCCHHHHHHHH-------C-CCCEEEECCCCCCCC---------ccchhhhhHHHHHHHHHHHH
Confidence 4677889999887765443 3 589999987542111 12234556666666665543
No 281
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=92.18 E-value=0.41 Score=29.22 Aligned_cols=63 Identities=13% Similarity=0.047 Sum_probs=45.3
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+++.+.+|++|...+.++++.+ .+|-+.|-++.+..+ .+.++=..+.+++..|+..+..++.
T Consensus 55 ~~l~l~~gDLtD~~~l~r~l~~v------~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR 117 (345)
T COG1089 55 PRLHLHYGDLTDSSNLLRILEEV------QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIR 117 (345)
T ss_pred ceeEEEeccccchHHHHHHHHhc------Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHH
Confidence 45788899999999999999887 788888877765432 2222234456777788887776643
No 282
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=90.42 E-value=0.67 Score=29.24 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=26.2
Q ss_pred eeccCCChHHH-HHHHHHHHHHcCCCCcEEEecccccCCccc
Q psy346 11 LPMDVSNTSTI-STAMSAIKEKFSRPPNVLVNCAGITRDNWF 51 (87)
Q Consensus 11 ~~~D~~~~~~~-~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~ 51 (87)
..+|+++.+++ +.+++. .++ .+|++|+|||+....+.
T Consensus 244 ~~~~v~~~~~~~~~~~~~---~~~-~~D~~i~~Aavsd~~~~ 281 (390)
T TIGR00521 244 KSIKVSTAEEMLEAALNE---LAK-DFDIFISAAAVADFKPK 281 (390)
T ss_pred EEEEeccHHHHHHHHHHh---hcc-cCCEEEEcccccccccc
Confidence 35788887777 445433 356 89999999999765543
No 283
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=90.27 E-value=1.2 Score=26.10 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 30 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 30 ~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.+. .+|.+||++|..... .....+.....+++|+.++..+.+++.
T Consensus 53 ~~~~-~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~ 98 (292)
T TIGR01777 53 EALE-GADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIA 98 (292)
T ss_pred hhcC-CCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence 3456 799999999874321 122334456677899998888777764
No 284
>KOG4022|consensus
Probab=89.19 E-value=2.7 Score=23.78 Aligned_cols=66 Identities=6% Similarity=-0.082 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCC-CCcEEEecccccCCcccccCC-HHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 19 STISTAMSAIKEKFSR-PPNVLVNCAGITRDNWFLKLT-EKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~-~~d~lv~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
++-+.+++++-+.+++ .+|.+++-||....+....-+ ...-+-++...++....-.+.+..+++..
T Consensus 55 EQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G 122 (236)
T KOG4022|consen 55 EQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG 122 (236)
T ss_pred HHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 4455666666666554 799999999876554322111 23344556666666665566666666543
No 285
>KOG1431|consensus
Probab=86.51 E-value=1.9 Score=25.76 Aligned_cols=49 Identities=10% Similarity=0.132 Sum_probs=33.1
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCc-ccccCCHHHHHHHHHhh
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN-WFLKLTEKDFQQVFDVN 66 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n 66 (87)
.+|+++.++.+++++.. ++..+|+.|+..+.- .=...+.+.|...+.+|
T Consensus 38 d~DLt~~a~t~~lF~~e------kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in 87 (315)
T KOG1431|consen 38 DADLTNLADTRALFESE------KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN 87 (315)
T ss_pred cccccchHHHHHHHhcc------CCceeeehHhhhcchhhcCCCchHHHhhcceec
Confidence 67999999999998875 677788888764321 11234456677666554
No 286
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism]
Probab=86.25 E-value=5 Score=24.27 Aligned_cols=54 Identities=11% Similarity=0.069 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCCCcEEEecccccCCcccccCC-HHHHHHHH---HhhhHHHHHHHHHHHH
Q psy346 23 TAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLT-EKDFQQVF---DVNLKLVDRRGGTAGK 79 (87)
Q Consensus 23 ~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~-~~~~~~~~---~~n~~~~~~~~~~~~~ 79 (87)
.-+++++++ ..|++|...+....-++.+.+ ++++.+.| ..|+.|++++|-.+..
T Consensus 90 ~tfeeVk~~---~FDG~IiTGAPve~l~feeV~YW~el~~I~eWskt~V~STl~ICWgaqA 147 (307)
T COG1897 90 CTFEEVKDQ---KFDGLIITGAPVELLPFEEVAYWEELKQIFEWSKTHVTSTLHICWGAQA 147 (307)
T ss_pred hcHHHHhhc---ccCceEEeCCcccccCchhhhhHHHHHHHHHHHhhcchhhhhhHHHHHH
Confidence 345555543 799988765555455676666 56666665 6789999999866543
No 287
>PLN02206 UDP-glucuronate decarboxylase
Probab=85.89 E-value=4.2 Score=26.13 Aligned_cols=41 Identities=12% Similarity=0.017 Sum_probs=28.5
Q ss_pred CCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
.+|.+||.|+...+... ..+ -...+++|+.++..+.+++..
T Consensus 183 ~~D~ViHlAa~~~~~~~-~~~---p~~~~~~Nv~gt~nLleaa~~ 223 (442)
T PLN02206 183 EVDQIYHLACPASPVHY-KFN---PVKTIKTNVVGTLNMLGLAKR 223 (442)
T ss_pred CCCEEEEeeeecchhhh-hcC---HHHHHHHHHHHHHHHHHHHHH
Confidence 58999999986533211 112 346788999999999887653
No 288
>KOG1430|consensus
Probab=84.45 E-value=3.2 Score=26.14 Aligned_cols=61 Identities=20% Similarity=0.213 Sum_probs=37.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
...+.++.+|+.+..++.+.+ . +. .++|+|+...+.-. . .+-+..+++|+.|+..+..+..
T Consensus 54 ~~~v~~~~~D~~~~~~i~~a~-------~-~~-~Vvh~aa~~~~~~~-~---~~~~~~~~vNV~gT~nvi~~c~ 114 (361)
T KOG1430|consen 54 SGRVTVILGDLLDANSISNAF-------Q-GA-VVVHCAASPVPDFV-E---NDRDLAMRVNVNGTLNVIEACK 114 (361)
T ss_pred CCceeEEecchhhhhhhhhhc-------c-Cc-eEEEeccccCcccc-c---cchhhheeecchhHHHHHHHHH
Confidence 456778888888766655442 3 44 56776655332211 1 1456778999999777666544
No 289
>KOG1202|consensus
Probab=82.96 E-value=0.71 Score=33.77 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=57.8
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.|..|..-..|++..+....++++.. ++| ++.+++|-|.+..+..+.+.++++|+.+-.-.+.++.++-+...
T Consensus 1819 ~GVqV~vsT~nitt~~ga~~Li~~s~-kl~-~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sR 1891 (2376)
T KOG1202|consen 1819 RGVQVQVSTSNITTAEGARGLIEESN-KLG-PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSR 1891 (2376)
T ss_pred cCeEEEEecccchhhhhHHHHHHHhh-hcc-cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhh
Confidence 34555555667877778888888774 457 89999999999888999999999999999888888887765543
No 290
>TIGR01001 metA homoserine O-succinyltransferase. The apparent equivalog from Bacillus subtilis is broken into two tandem reading frames.
Probab=82.49 E-value=9.1 Score=23.57 Aligned_cols=64 Identities=8% Similarity=-0.047 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCC-HHHHHHHH---HhhhHHHHHHHHHHHHHH
Q psy346 18 TSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLT-EKDFQQVF---DVNLKLVDRRGGTAGKVC 81 (87)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~-~~~~~~~~---~~n~~~~~~~~~~~~~~~ 81 (87)
.+.+.++-....+.-....|++|..-+.....++.+.+ ++++.+.+ +.|+.+.+++|-++.-.+
T Consensus 82 ~~hl~~fY~~f~~ik~~~fDGlIITGAPvE~l~FeeV~YW~El~~I~dwsk~~v~Stl~iCWaAqAaL 149 (300)
T TIGR01001 82 IEHLNKFYTTFEAVKDRKFDGLIITGAPVELVPFEDVAYWEELTEIMEWSKHNVTSTMFICWAAQAGL 149 (300)
T ss_pred HHHHHHHhhCHHHHhcCCCCEEEEcCCCcCCCCcccCCcHHHHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 34555544444332112899998866555556777777 56666665 578999999987665433
No 291
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=81.61 E-value=4.6 Score=25.91 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=28.5
Q ss_pred CCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Q psy346 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGK 79 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 79 (87)
++|++||+|+....... ..+ -...+.+|+.++..+..++..
T Consensus 184 ~~D~ViHlAa~~~~~~~-~~~---p~~~~~~Nv~gT~nLleaa~~ 224 (436)
T PLN02166 184 EVDQIYHLACPASPVHY-KYN---PVKTIKTNVMGTLNMLGLAKR 224 (436)
T ss_pred CCCEEEECceeccchhh-ccC---HHHHHHHHHHHHHHHHHHHHH
Confidence 68999999986433211 112 246788999999999877654
No 292
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=80.02 E-value=6.7 Score=21.39 Aligned_cols=33 Identities=12% Similarity=0.226 Sum_probs=23.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.++..+.+|+.|++++.+. +. +.|.+|+++|..
T Consensus 39 ~~~~~~~~d~~d~~~~~~a-------l~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 39 PGVEIIQGDLFDPDSVKAA-------LK-GADAVIHAAGPP 71 (183)
T ss_dssp TTEEEEESCTTCHHHHHHH-------HT-TSSEEEECCHST
T ss_pred cccccceeeehhhhhhhhh-------hh-hcchhhhhhhhh
Confidence 5678888999888655543 23 578888888654
No 293
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=79.70 E-value=3.9 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=24.0
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.+.++....+|+.|.+++.++++ .-|++|+++|..
T Consensus 44 ~~~~~~~~~~d~~~~~~l~~~~~--------~~dvVin~~gp~ 78 (386)
T PF03435_consen 44 LGDRVEAVQVDVNDPESLAELLR--------GCDVVINCAGPF 78 (386)
T ss_dssp TTTTEEEEE--TTTHHHHHHHHT--------TSSEEEE-SSGG
T ss_pred cccceeEEEEecCCHHHHHHHHh--------cCCEEEECCccc
Confidence 45678899999998887665532 469999999875
No 294
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.40 E-value=3.7 Score=26.03 Aligned_cols=63 Identities=6% Similarity=0.030 Sum_probs=37.2
Q ss_pred CCCceeeeeccCCChHH--HHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTST--ISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~--~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
...++..+..|++.+.- -+.-+..+ .. .+|.++||++..+. .| +.+....|+.|...+.+.+.
T Consensus 58 ~~~ri~vv~gDl~e~~lGL~~~~~~~L---a~-~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~ 123 (382)
T COG3320 58 SADRVEVVAGDLAEPDLGLSERTWQEL---AE-NVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAA 123 (382)
T ss_pred hcceEEEEecccccccCCCCHHHHHHH---hh-hcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHh
Confidence 34677888888875420 01112222 12 68999999987543 33 45556677777766665543
No 295
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=79.01 E-value=12 Score=22.58 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=32.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 68 (87)
|.++..+..=-.+++.+...+.. ... +.|++|.+-|..+ ...+++.+.+.+.+...+.
T Consensus 34 G~~v~~~~~VgD~~~~I~~~l~~---a~~-r~D~vI~tGGLGP--T~DDiT~e~vAka~g~~lv 91 (255)
T COG1058 34 GVDLARITTVGDNPDRIVEALRE---ASE-RADVVITTGGLGP--THDDLTAEAVAKALGRPLV 91 (255)
T ss_pred CceEEEEEecCCCHHHHHHHHHH---HHh-CCCEEEECCCcCC--CccHhHHHHHHHHhCCCcc
Confidence 33444333222344445544444 445 7899998877743 2346676766666655443
No 296
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=75.55 E-value=7.7 Score=28.36 Aligned_cols=61 Identities=10% Similarity=0.018 Sum_probs=36.8
Q ss_pred ceeeeeccCCChHH--HHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTST--ISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~--~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
++.++.+|++++.- -....+.+ .. .+|.+||+|+..... .+ +......|+.++..+.+.+.
T Consensus 1035 ~i~~~~gDl~~~~lgl~~~~~~~l---~~-~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~ 1097 (1389)
T TIGR03443 1035 RIEVVLGDLSKEKFGLSDEKWSDL---TN-EVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCA 1097 (1389)
T ss_pred ceEEEeccCCCccCCcCHHHHHHH---Hh-cCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHH
Confidence 57778888875521 01112222 23 689999999875321 12 33345578888888887664
No 297
>KOG0092|consensus
Probab=73.71 E-value=15 Score=21.28 Aligned_cols=40 Identities=18% Similarity=0.326 Sum_probs=28.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHc--CCCCcEEEecccc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKF--SRPPNVLVNCAGI 45 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~--g~~~d~lv~~ag~ 45 (87)
|..+..+..|+++.++..++-..+.+-. . +++++|.-+|-
T Consensus 77 gA~AAivvYDit~~~SF~~aK~WvkeL~~~~-~~~~vialvGN 118 (200)
T KOG0092|consen 77 GANAAIVVYDITDEESFEKAKNWVKELQRQA-SPNIVIALVGN 118 (200)
T ss_pred CCcEEEEEEecccHHHHHHHHHHHHHHHhhC-CCCeEEEEecc
Confidence 4566677889999998777655555432 3 68888877775
No 298
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=73.61 E-value=13 Score=20.65 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKL 69 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 69 (87)
|..+..+..--.+++.+.+.+..+. . +.|++|.+-|... . ..+.+.+.+.+.+..-+..
T Consensus 32 G~~v~~~~~v~Dd~~~I~~~l~~~~---~-~~dlVIttGG~G~-t-~~D~t~ea~~~~~~~~l~~ 90 (170)
T cd00885 32 GIEVYRVTVVGDDEDRIAEALRRAS---E-RADLVITTGGLGP-T-HDDLTREAVAKAFGRPLVL 90 (170)
T ss_pred CCEEEEEEEeCCCHHHHHHHHHHHH---h-CCCEEEECCCCCC-C-CCChHHHHHHHHhCCCccc
Confidence 4444443333345556666665554 3 6788888765532 2 2355556666655544433
No 299
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=72.36 E-value=6.2 Score=22.35 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecccccCCcc
Q psy346 20 TISTAMSAIKEKFSRPPNVLVNCAGITRDNW 50 (87)
Q Consensus 20 ~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~ 50 (87)
+.....+.+.+.+. .-|++|++|++....+
T Consensus 68 sa~em~~~~~~~~~-~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 68 SAEEMLEAVKELLP-SADIIIMAAAVSDFRP 97 (185)
T ss_dssp SHHHHHHHHHHHGG-GGSEEEE-SB--SEEE
T ss_pred chhhhhhhhccccC-cceeEEEecchhheee
Confidence 45566666666666 6799999999876543
No 300
>PRK12320 hypothetical protein; Provisional
Probab=70.91 E-value=28 Score=24.21 Aligned_cols=51 Identities=8% Similarity=0.063 Sum_probs=32.3
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.+.++.+|++++. +. ++ .. ++|.+||+++..... ...+|+.++..+.+++.
T Consensus 41 ~ve~v~~Dl~d~~-l~----~a---l~-~~D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~ 91 (699)
T PRK12320 41 RVDYVCASLRNPV-LQ----EL---AG-EADAVIHLAPVDTSA------------PGGVGITGLAHVANAAA 91 (699)
T ss_pred CceEEEccCCCHH-HH----HH---hc-CCCEEEEcCccCccc------------hhhHHHHHHHHHHHHHH
Confidence 4667888988762 22 22 23 689999999763211 11467888877776653
No 301
>KOG2733|consensus
Probab=70.38 E-value=11 Score=24.15 Aligned_cols=30 Identities=30% Similarity=0.479 Sum_probs=23.2
Q ss_pred eeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 10 ~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
.+.+|..|++++.+...+. .+++||+|...
T Consensus 66 i~i~D~~n~~Sl~emak~~--------~vivN~vGPyR 95 (423)
T KOG2733|consen 66 ILIADSANEASLDEMAKQA--------RVIVNCVGPYR 95 (423)
T ss_pred EEEecCCCHHHHHHHHhhh--------EEEEeccccce
Confidence 6779999999888776554 47899998753
No 302
>PRK01215 competence damage-inducible protein A; Provisional
Probab=69.89 E-value=22 Score=21.45 Aligned_cols=56 Identities=16% Similarity=0.285 Sum_probs=30.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n 66 (87)
|..+.....--.|++.+.+.+..+.+ +.|++|.+-|.... ..+.+.+.+.+.+...
T Consensus 36 G~~v~~~~~v~Dd~~~I~~~l~~a~~----~~DlVIttGG~g~t--~dD~t~eaia~~~g~~ 91 (264)
T PRK01215 36 GYTVRRITVVMDDIEEIVSAFREAID----RADVVVSTGGLGPT--YDDKTNEGFAKALGVE 91 (264)
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHHhc----CCCEEEEeCCCcCC--hhhhHHHHHHHHhCCC
Confidence 44454443333455666666666543 56998888665432 2344555555554433
No 303
>PF08883 DOPA_dioxygen: Dopa 4,5-dioxygenase family; InterPro: IPR014980 This family of proteins is related to P87064 from SWISSPROT a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore. ; PDB: 2NYH_A 2P8I_C.
Probab=69.74 E-value=14 Score=19.09 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=22.7
Q ss_pred eeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 10 ~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
.+++++ .++...+++..+...-| +++++||.-
T Consensus 47 ~~ev~f-~~~~f~~~v~Wl~~nrg-~LsVLiHP~ 78 (104)
T PF08883_consen 47 SFEVDF-PPEQFAEVVPWLMLNRG-GLSVLIHPN 78 (104)
T ss_dssp EEEEEE--HHHHHHHHHHHHHH-T-T--EEEEEE
T ss_pred eEEEEc-CHHHHHHHHHHHHHhCC-CceEEEcCC
Confidence 456677 57888999999988888 999999853
No 304
>KOG1344|consensus
Probab=67.96 E-value=12 Score=22.46 Aligned_cols=25 Identities=20% Similarity=0.397 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 20 TISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 20 ~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.+++.+.+..+++ .+|.+|+|||..
T Consensus 235 kl~r~l~~sl~ef--~Pd~VvYNAGTD 259 (324)
T KOG1344|consen 235 KLKRCLMQSLAEF--RPDMVVYNAGTD 259 (324)
T ss_pred HHHHHHHHHHHhh--CCcEEEEeCCCc
Confidence 5566666666666 599999999963
No 305
>PF03753 HHV6-IE: Human herpesvirus 6 immediate early protein ; InterPro: IPR005507 The proteins in this family are poorly characterised, but an investigation [] has indicated that the immediate early protein is required for the down-regulation of MHC class I expression in dendritic cells. Human herpesvirus 6 immediate early protein is also referred to as U90.
Probab=67.40 E-value=2.4 Score=28.62 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=28.8
Q ss_pred CcEEEecccccCC--cccccCCHHHHHHHHHhhhHHHH
Q psy346 36 PNVLVNCAGITRD--NWFLKLTEKDFQQVFDVNLKLVD 71 (87)
Q Consensus 36 ~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~ 71 (87)
-|-||++||.... ..+..+-.|++.+++++|+.+..
T Consensus 44 ED~LIn~AGlLT~~r~Ml~~L~LEQLsQliNiNLlS~a 81 (993)
T PF03753_consen 44 EDCLINHAGLLTNDRSMLTGLALEQLSQLININLLSSA 81 (993)
T ss_pred HHHHhhccchhhhhHHHHHHHHHHHHHhhhhhhhhccc
Confidence 3679999998643 45678888999999999988754
No 306
>PF06569 DUF1128: Protein of unknown function (DUF1128); InterPro: IPR009507 This family consists of several short, hypothetical bacterial proteins of unknown function.
Probab=64.96 E-value=13 Score=17.77 Aligned_cols=42 Identities=17% Similarity=0.357 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHH
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~ 64 (87)
..+.+.-.++++++++. +.|+|...+..+.....+++...++
T Consensus 5 s~ENv~~MIe~Ik~KL~------mvN~~~i~~~~f~~~~yedl~diy~ 46 (71)
T PF06569_consen 5 SQENVEYMIEEIKQKLN------MVNAGAIKPEDFSEEKYEDLKDIYE 46 (71)
T ss_pred cHHHHHHHHHHHHHHHH------HhhHHhCCHHhCChhhHHHHHHHHH
Confidence 45677888899988765 3466776666666666676666554
No 307
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=62.60 E-value=21 Score=20.12 Aligned_cols=29 Identities=7% Similarity=0.182 Sum_probs=18.9
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEeccc
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG 44 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag 44 (87)
+.+|+.+++..+.+.+-+. .-|++|.|-.
T Consensus 1 V~lDl~~~~gr~~l~~L~~-----~ADV~i~n~r 29 (191)
T PF02515_consen 1 VALDLKSPEGRAALRRLLA-----TADVVIENFR 29 (191)
T ss_dssp EEEETTSHHHHHHHHHHHH-----T-SEEEEESS
T ss_pred CEeeCcCHHHHHHHHHHHH-----hCCEEEECCc
Confidence 4578888877665555543 5788888754
No 308
>PLN00106 malate dehydrogenase
Probab=62.51 E-value=25 Score=21.90 Aligned_cols=42 Identities=14% Similarity=0.295 Sum_probs=26.8
Q ss_pred HHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 30 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 30 ~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.+. ..|++|+.||..... . ..+...+..|....-.+.+.+.
T Consensus 82 ~~l~-~aDiVVitAG~~~~~---g---~~R~dll~~N~~i~~~i~~~i~ 123 (323)
T PLN00106 82 DALK-GADLVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEAVA 123 (323)
T ss_pred HHcC-CCCEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHH
Confidence 3455 799999999985331 1 2366677778777655554443
No 309
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=62.27 E-value=21 Score=22.35 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=29.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG 44 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag 44 (87)
...-+..|.-..+.-+..++.+++.+| .+|.+|++-+
T Consensus 104 yAksingDaFS~e~k~kvIe~Ik~~~g-~vDlvvYSlA 140 (398)
T COG3007 104 YAKSINGDAFSDEMKQKVIEAIKQDFG-KVDLVVYSLA 140 (398)
T ss_pred eeeecccchhhHHHHHHHHHHHHHhhc-cccEEEEecc
Confidence 345566777666777889999999999 9999998754
No 310
>PF01220 DHquinase_II: Dehydroquinase class II; InterPro: IPR001874 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. Class-II enzymes are homododecameric enzymes of about 17 kDa. They are found in some bacteria such as actinomycetales [, ] and some fungi where they act in a catabolic pathway that allows the use of quinic acid as a carbon source.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 3N8K_J 3N7A_I 3N87_F 3N8N_H 3N86_N 1H0S_A 3N59_J 1H05_A 1H0R_A 2Y71_A ....
Probab=60.93 E-value=9.6 Score=20.77 Aligned_cols=35 Identities=9% Similarity=-0.048 Sum_probs=22.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
..+.+++.+- =..+++.+.+... ..|++|.|+|..
T Consensus 43 ~~v~~~QSN~-----EGelid~I~~a~~-~~dgiIINpga~ 77 (140)
T PF01220_consen 43 VEVEFFQSNH-----EGELIDWIHEARD-DVDGIIINPGAY 77 (140)
T ss_dssp EEEEEEE-SS-----HHHHHHHHHHHTC-TTSEEEEE-GGG
T ss_pred CeEEEEecCC-----HHHHHHHHHHHHh-hCCEEEEccchh
Confidence 3445555442 2456777777777 799999888865
No 311
>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.
Probab=60.71 E-value=27 Score=19.31 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=24.3
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
++.+..+..++++.....+++.+.++ .+|+++...|.
T Consensus 88 v~~~~~~~~~~~~a~~y~~~~~~~~~-~~Dl~lLG~G~ 124 (169)
T cd00458 88 VHYVDTSLPIEKACEKYEREILDQVD-AIDLAVDGAGY 124 (169)
T ss_pred eecCCCCCCcHHHHHHHHHHHHhhCC-CCCEEEECcCc
Confidence 34444444555666666666667778 89999988874
No 312
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=59.58 E-value=11 Score=21.84 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=24.9
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
..|.+++.|+++++..+.+.+.+.. . ++|++++=.
T Consensus 85 ~~V~~iq~d~~~~~~~~~l~~~l~~--~-~~DvV~sD~ 119 (205)
T COG0293 85 PGVIFLQGDITDEDTLEKLLEALGG--A-PVDVVLSDM 119 (205)
T ss_pred CCceEEeeeccCccHHHHHHHHcCC--C-CcceEEecC
Confidence 4589999999998887777666632 1 458877543
No 313
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=59.55 E-value=9.3 Score=20.81 Aligned_cols=36 Identities=8% Similarity=-0.032 Sum_probs=22.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
+..+.+++.+. =..+++.+.+..+ ..|++|.|+|..
T Consensus 41 g~~v~~~QSN~-----Egelid~I~~a~~-~~dgiIINpga~ 76 (140)
T cd00466 41 GVEVEFFQSNH-----EGELIDWIHEARD-GADGIIINPGAY 76 (140)
T ss_pred CCEEEEEeeCc-----HHHHHHHHHHhhc-cCcEEEEcchHH
Confidence 34455555442 2455666666656 789998888764
No 314
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=57.36 E-value=16 Score=20.10 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=22.5
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
..+.+++.+- =-.+++.+.+..+ ..|++|.|+|..
T Consensus 44 ~~v~~~QSN~-----EGelId~I~~a~~-~~dgiiINpga~ 78 (146)
T PRK05395 44 VELEFFQSNH-----EGELIDRIHEARD-GADGIIINPGAY 78 (146)
T ss_pred CEEEEEeeCc-----HHHHHHHHHhccc-CCcEEEECchHH
Confidence 3455555442 2456677766666 789999888764
No 315
>PF14195 DUF4316: Domain of unknown function (DUF4316)
Probab=56.69 E-value=9.3 Score=18.22 Aligned_cols=17 Identities=6% Similarity=0.171 Sum_probs=12.9
Q ss_pred HHHHHHHcCCCCcEEEec
Q psy346 25 MSAIKEKFSRPPNVLVNC 42 (87)
Q Consensus 25 ~~~~~~~~g~~~d~lv~~ 42 (87)
-....+.++ -||++|||
T Consensus 9 E~~~EqNYn-MIDGiiNN 25 (70)
T PF14195_consen 9 EMSTEQNYN-MIDGIINN 25 (70)
T ss_pred HHHhhcccc-cccccccC
Confidence 334456778 89999999
No 316
>COG4840 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.49 E-value=22 Score=16.76 Aligned_cols=43 Identities=16% Similarity=0.366 Sum_probs=28.0
Q ss_pred CChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHH
Q psy346 16 SNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64 (87)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~ 64 (87)
.+.+.+.-.++++.+++. +.|.|+..+..+.....+++...++
T Consensus 4 ~n~Enl~fmi~eI~~KLn------mvN~gvl~~e~~d~~~~edLtdiy~ 46 (71)
T COG4840 4 PNEENLDFMIEEIREKLN------MVNVGVLDPEKYDNANYEDLTDIYD 46 (71)
T ss_pred cchhhHHHHHHHHHHHHh------hhhhhccCHHhcccccHHHHHHHHH
Confidence 345666777788877655 3467777666666666676655543
No 317
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=55.33 E-value=6 Score=24.29 Aligned_cols=59 Identities=12% Similarity=0.044 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCC-HHHHHHHHH---hhhHHHHHHHHHH
Q psy346 19 STISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLT-EKDFQQVFD---VNLKLVDRRGGTA 77 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~-~~~~~~~~~---~n~~~~~~~~~~~ 77 (87)
+.+.++-....+.-....|++|..-+.....++.+.+ ++++.+.++ .|+.+.+.+|-++
T Consensus 82 ~~l~~~Y~~~~~i~~~~~DglIITGAPvE~l~Fe~V~YW~El~~i~dwa~~~v~stl~iCWgA 144 (298)
T PF04204_consen 82 EHLEKFYKTFDEIKDRKFDGLIITGAPVEQLPFEEVDYWDELTEIFDWAKTHVTSTLFICWGA 144 (298)
T ss_dssp HHHHHHEE-HHHCTTS-EEEEEE---TTTTS-GGGSTTHHHHHHHHHHHHHHEEEEEEETHHH
T ss_pred HHHHHhhhCHHHHhhCCCCEEEEeCCCcCCCCcccCCcHHHHHHHHHHHHHcCCcchhhhHHH
Confidence 4455443334333222799998865555557788877 677777765 6766666665444
No 318
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=55.27 E-value=11 Score=20.64 Aligned_cols=24 Identities=17% Similarity=0.047 Sum_probs=16.2
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccc
Q psy346 22 STAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 22 ~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
-.+++.+.+... ..|++|.|+|..
T Consensus 55 GelId~i~~a~~-~~dgiIINpga~ 78 (146)
T PRK13015 55 GELIDWIHEARG-DVAGIVINPGAY 78 (146)
T ss_pred HHHHHHHHHhhh-cCCEEEEcchHH
Confidence 345666665555 788888888764
No 319
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=53.95 E-value=20 Score=19.64 Aligned_cols=36 Identities=8% Similarity=-0.017 Sum_probs=22.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
..+.+++.+. =-.+++.+.+..+ ..|++|.|+|...
T Consensus 42 ~~v~~~QSN~-----EGelId~i~~a~~-~~dgiIINpga~T 77 (141)
T TIGR01088 42 VELEFFQSNS-----EGQLIDKIHEAEG-QYDGIIINPGALT 77 (141)
T ss_pred CEEEEEeeCc-----HHHHHHHHHhccc-cCCEEEEcChHHh
Confidence 3445555442 2456666666666 7898888887643
No 320
>PF07845 DUF1636: Protein of unknown function (DUF1636); InterPro: IPR012863 The sequences featured in this family are derived from a number of hypothetical prokaryotic proteins. The region in question is approximately 130 amino acids long.
Probab=53.55 E-value=16 Score=19.16 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=26.6
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEE
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLV 40 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv 40 (87)
..++..|+-.|+...++...+++.+..-.. ..|++|
T Consensus 62 ~~gK~tYlfGdl~p~~~a~~il~~a~~Y~~-s~dG~v 97 (116)
T PF07845_consen 62 APGKWTYLFGDLDPDEDAEDILAFAALYAA-SPDGLV 97 (116)
T ss_pred cCCCcEEEEecCCcccCHHHHHHHHHHHHh-CCCCcc
Confidence 456778888898766778888888776655 667665
No 321
>PRK03670 competence damage-inducible protein A; Provisional
Probab=53.36 E-value=48 Score=19.91 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=30.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhh
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n 66 (87)
|..+..+..--.+++.+.+.+..+.+ . ..|++|.+-|.... ..+.+.+...+.+...
T Consensus 33 G~~v~~~~iV~Dd~~~I~~~l~~a~~--~-~~DlVIttGGlGpt--~dD~T~eava~a~g~~ 89 (252)
T PRK03670 33 GYWVRRITTVGDDVEEIKSVVLEILS--R-KPEVLVISGGLGPT--HDDVTMLAVAEALGRE 89 (252)
T ss_pred CCEEEEEEEcCCCHHHHHHHHHHHhh--C-CCCEEEECCCccCC--CCCchHHHHHHHhCCC
Confidence 44444443333455566666555433 2 46898888665432 2355555555555443
No 322
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=53.30 E-value=36 Score=19.03 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=23.6
Q ss_pred ccCCCh--HHHHHHHHHHHHHcCCCCcEEEecccccCC
Q psy346 13 MDVSNT--STISTAMSAIKEKFSRPPNVLVNCAGITRD 48 (87)
Q Consensus 13 ~D~~~~--~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~ 48 (87)
.|.+.+ +.+.++++.+.+....+-.++|||.|....
T Consensus 81 ~D~~~p~~~~l~~~v~~i~~~~~~g~kVvVHC~~GigR 118 (180)
T COG2453 81 LDGTVPDLEDLDKIVDFIEEALSKGKKVVVHCQGGIGR 118 (180)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEcCCCCch
Confidence 354433 677777777777654244899999876543
No 323
>PRK09620 hypothetical protein; Provisional
Probab=52.10 E-value=12 Score=21.88 Aligned_cols=16 Identities=6% Similarity=-0.149 Sum_probs=12.6
Q ss_pred CCcEEEecccccCCcc
Q psy346 35 PPNVLVNCAGITRDNW 50 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~ 50 (87)
.+|++||+|++....+
T Consensus 87 ~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 87 KVDAVIMAAAGSDWVV 102 (229)
T ss_pred CCCEEEECccccceec
Confidence 5899999999865543
No 324
>PRK00549 competence damage-inducible protein A; Provisional
Probab=51.50 E-value=64 Score=20.86 Aligned_cols=53 Identities=9% Similarity=0.127 Sum_probs=27.7
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
|..+.....=-.+++.+.+.+..+ .. +.|++|.+-|.... ..+.+.+-+.+.+
T Consensus 33 G~~v~~~~~v~Dd~~~I~~~l~~a---~~-~~DlVItTGGlGpt--~dD~t~ea~a~~~ 85 (414)
T PRK00549 33 GIDVYHQTVVGDNPERLLSALEIA---EE-RSDLIITTGGLGPT--KDDLTKETVAKFL 85 (414)
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHh---cc-CCCEEEECCCCCCC--CCccHHHHHHHHh
Confidence 344443333233455556555543 44 78999988665432 2345555555443
No 325
>KOG4589|consensus
Probab=51.41 E-value=15 Score=21.41 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=24.0
Q ss_pred Cceeeeec-cCCChHHHHHHHHHHHHHcCCCCcEEEe
Q psy346 6 STHLSLPM-DVSNTSTISTAMSAIKEKFSRPPNVLVN 41 (87)
Q Consensus 6 ~~v~~~~~-D~~~~~~~~~~~~~~~~~~g~~~d~lv~ 41 (87)
..+..+.. |++|++...++++.+-. . ++|+++.
T Consensus 109 ~Ga~~i~~~dvtdp~~~~ki~e~lp~--r-~VdvVlS 142 (232)
T KOG4589|consen 109 EGATIIQGNDVTDPETYRKIFEALPN--R-PVDVVLS 142 (232)
T ss_pred CCcccccccccCCHHHHHHHHHhCCC--C-cccEEEe
Confidence 44555655 99999999988888732 2 7888764
No 326
>KOG1099|consensus
Probab=51.12 E-value=54 Score=19.90 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=28.4
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCC-CCcEEEecccccCCcccccCC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSR-PPNVLVNCAGITRDNWFLKLT 55 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-~~d~lv~~ag~~~~~~~~~~~ 55 (87)
..|..++.|+|.....+.+++ .||+ +-|++| |-|......+.+++
T Consensus 89 ~GV~qlq~DIT~~stae~Ii~----hfggekAdlVv-cDGAPDvTGlHd~D 134 (294)
T KOG1099|consen 89 EGVIQLQGDITSASTAEAIIE----HFGGEKADLVV-CDGAPDVTGLHDLD 134 (294)
T ss_pred CceEEeecccCCHhHHHHHHH----HhCCCCccEEE-eCCCCCccccccHH
Confidence 467888999998877665554 4564 556655 45554445555544
No 327
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=50.62 E-value=34 Score=19.63 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=25.2
Q ss_pred CCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
+.|+++.|.|...-....+.+.++ +.-|+...+...+.++
T Consensus 50 ~~DVIi~Ns~LWDl~ry~~~~~~~----Y~~NL~~Lf~rLk~~l 89 (183)
T cd01842 50 RLDLVIMNSCLWDLSRYQRNSMKT----YRENLERLFSKLDSVL 89 (183)
T ss_pred ceeEEEEecceecccccCCCCHHH----HHHHHHHHHHHHHhhC
Confidence 899999999987654444444444 4556666665555433
No 328
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=49.91 E-value=44 Score=18.73 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=25.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.+..+.+|=.++++++++++.+++..+ + +.+..+|..
T Consensus 100 g~d~I~lD~~~~~~~~~~v~~l~~~~~-~--v~ie~SGGI 136 (169)
T PF01729_consen 100 GADIIMLDNMSPEDLKEAVEELRELNP-R--VKIEASGGI 136 (169)
T ss_dssp T-SEEEEES-CHHHHHHHHHHHHHHTT-T--SEEEEESSS
T ss_pred CCCEEEecCcCHHHHHHHHHHHhhcCC-c--EEEEEECCC
Confidence 356778898899999999999977755 4 555555543
No 329
>PF03461 TRCF: TRCF domain; InterPro: IPR005118 This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor (TRCF) which releases RNAP and the truncated transcript.; GO: 0003684 damaged DNA binding, 0004386 helicase activity, 0005524 ATP binding, 0006281 DNA repair; PDB: 2QSR_A 2EYQ_A.
Probab=49.71 E-value=25 Score=17.74 Aligned_cols=20 Identities=5% Similarity=0.260 Sum_probs=14.7
Q ss_pred cCCChHHHHHHHHHHHHHcC
Q psy346 14 DVSNTSTISTAMSAIKEKFS 33 (87)
Q Consensus 14 D~~~~~~~~~~~~~~~~~~g 33 (87)
.+.+.+++..+.+++.+.||
T Consensus 28 ~~~~~~el~~l~~El~DRFG 47 (101)
T PF03461_consen 28 SAESEEELEDLREELIDRFG 47 (101)
T ss_dssp C--SHHHHHHHHHHHHHHH-
T ss_pred hCCCHHHHHHHHHHHHHHcC
Confidence 35677889999999999998
No 330
>PRK03673 hypothetical protein; Provisional
Probab=49.68 E-value=69 Score=20.70 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=22.0
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
|..+....+=-.+++.+.+.+..+ .. +.|++|.+-|..+
T Consensus 34 G~~v~~~~~v~D~~~~i~~~l~~a---~~-~~DlVI~tGGlGp 72 (396)
T PRK03673 34 GLPLSRRNTVGDNLDALVAILRER---SQ-HADVLIVNGGLGP 72 (396)
T ss_pred CCEEEEEEEcCCCHHHHHHHHHHH---hc-cCCEEEEcCCCCC
Confidence 334443333333455555555544 45 7899998877643
No 331
>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain. cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species
Probab=49.53 E-value=71 Score=20.76 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=21.8
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
|..+.....--.|++.+.+.+..+ .. +.|++|.+-|..
T Consensus 33 G~~v~~~~~v~Dd~~~i~~~l~~a---~~-~~DlVIttGGlg 70 (413)
T TIGR00200 33 GLPLSRRTTVGDNPERLKTIIRIA---SE-RADVLIFNGGLG 70 (413)
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHH---hc-CCCEEEEcCCCC
Confidence 444444433334455555555544 34 789999886654
No 332
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=49.16 E-value=33 Score=19.67 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=24.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
++.++.+|+.+.+.+..+.+... .+ .+|+++.+.+.
T Consensus 92 ~v~~i~~D~~~~~~~~~i~~~~~--~~-~~D~V~S~~~~ 127 (209)
T PRK11188 92 GVDFLQGDFRDELVLKALLERVG--DS-KVQVVMSDMAP 127 (209)
T ss_pred CcEEEecCCCChHHHHHHHHHhC--CC-CCCEEecCCCC
Confidence 46778888888766666655543 24 79999887644
No 333
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases.; PDB: 3EEY_H 3LBY_A 3MTI_A.
Probab=48.41 E-value=6 Score=21.49 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=10.8
Q ss_pred CCcEEEecccccCCc
Q psy346 35 PPNVLVNCAGITRDN 49 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~ 49 (87)
++|.+++|=|..+.+
T Consensus 46 ~v~~~iFNLGYLPgg 60 (140)
T PF06962_consen 46 PVDAAIFNLGYLPGG 60 (140)
T ss_dssp -EEEEEEEESB-CTS
T ss_pred CcCEEEEECCcCCCC
Confidence 789999999987654
No 334
>COG0282 ackA Acetate kinase [Energy production and conversion]
Probab=47.84 E-value=36 Score=21.97 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=18.5
Q ss_pred HHHHHHHHcCCCCcEEEecccccCCcc
Q psy346 24 AMSAIKEKFSRPPNVLVNCAGITRDNW 50 (87)
Q Consensus 24 ~~~~~~~~~g~~~d~lv~~ag~~~~~~ 50 (87)
-+......++ ++|.+|+.+|+....+
T Consensus 309 yIg~y~a~L~-glDaiVFTaGIGENs~ 334 (396)
T COG0282 309 YIGSYAAALG-GLDALVFTAGIGENSA 334 (396)
T ss_pred HHHHHHHHhC-CCCEEEEeCccccCcH
Confidence 3334445567 8999999999976543
No 335
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=47.71 E-value=42 Score=17.66 Aligned_cols=54 Identities=7% Similarity=0.080 Sum_probs=30.4
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
.|.++.....--.+++.+.+.++++.+ ..|++|.+-|.... ..+.+.+-+++..
T Consensus 31 ~G~~v~~~~~v~Dd~~~i~~~i~~~~~----~~DlvittGG~g~g--~~D~t~~ai~~~g 84 (133)
T cd00758 31 LGCEVIYAGVVPDDADSIRAALIEASR----EADLVLTTGGTGVG--RRDVTPEALAELG 84 (133)
T ss_pred CCCEEEEeeecCCCHHHHHHHHHHHHh----cCCEEEECCCCCCC--CCcchHHHHHHhc
Confidence 344455443333466667776666543 57888887665432 2355555555543
No 336
>PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the NAD-binding domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A 1DPG_B 1H93_A 1H9A_A ....
Probab=47.59 E-value=50 Score=18.71 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=17.0
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEK 31 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~ 31 (87)
..+.+++.|++++++..++.+.+.+.
T Consensus 72 ~~~~Y~~~d~~~~~~y~~L~~~l~~~ 97 (183)
T PF00479_consen 72 SRLHYVQGDYDDPESYAALKKALEEL 97 (183)
T ss_dssp TTEEEEE--SS-HHHHHHHHHHHHHH
T ss_pred hccEEEeCCCCCchhHHHHHHHHHHh
Confidence 46889999999998877776655543
No 337
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=47.26 E-value=20 Score=21.16 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=21.3
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCC-CcEEEeccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRP-PNVLVNCAG 44 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~-~d~lv~~ag 44 (87)
+..+.+|+.|++++..+++.. +.+. + +|.++++++
T Consensus 41 ~~~~~~d~~d~~~l~~a~~~~-~~~~-g~~d~v~~~~~ 76 (285)
T TIGR03649 41 EKHVKFDWLDEDTWDNPFSSD-DGME-PEISAVYLVAP 76 (285)
T ss_pred CccccccCCCHHHHHHHHhcc-cCcC-CceeEEEEeCC
Confidence 345567888888777766543 2223 4 677776654
No 338
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=46.93 E-value=88 Score=21.42 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=35.6
Q ss_pred CceeeeeccCCCh-HHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCHHHHHHHHH
Q psy346 6 STHLSLPMDVSNT-STISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFD 64 (87)
Q Consensus 6 ~~v~~~~~D~~~~-~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~ 64 (87)
.++..++.|.|.. .+..+++++. ..+| .+-.++.+++...+ .-...++.+.+.+.++
T Consensus 507 ~~~vlLqaDvT~~~p~~~~lLk~~-~~~G-~P~~~ff~~~g~e~~~l~gf~~a~~~~~~l~ 565 (569)
T COG4232 507 QDVVLLQADVTANDPAITALLKRL-GVFG-VPTYLFFGPQGSEPEILTGFLTADAFLEHLE 565 (569)
T ss_pred CCeEEEEeeecCCCHHHHHHHHHc-CCCC-CCEEEEECCCCCcCcCCcceecHHHHHHHHH
Confidence 5678899999854 3445555554 3456 78888888655433 3344566666666553
No 339
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=46.70 E-value=67 Score=19.69 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=28.4
Q ss_pred CceeeeeccCC---ChHHHHHHHHHHHHHc--CCCCcEEEecccccCCcccccCCHH
Q psy346 6 STHLSLPMDVS---NTSTISTAMSAIKEKF--SRPPNVLVNCAGITRDNWFLKLTEK 57 (87)
Q Consensus 6 ~~v~~~~~D~~---~~~~~~~~~~~~~~~~--g~~~d~lv~~ag~~~~~~~~~~~~~ 57 (87)
.++..+++-+- .+.++.+.+..+.+.. . .+|++|..-|......+...+.+
T Consensus 42 ~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~-~~Dviii~RGGGs~eDL~~FN~e 97 (319)
T PF02601_consen 42 VEIILYPASVQGEGAAASIVSALRKANEMGQAD-DFDVIIIIRGGGSIEDLWAFNDE 97 (319)
T ss_pred cEEEEEeccccccchHHHHHHHHHHHHhccccc-cccEEEEecCCCChHHhcccChH
Confidence 45666666663 3445555566654432 2 48999988776543333333333
No 340
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=45.56 E-value=44 Score=21.85 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=28.3
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcE
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNV 38 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~ 38 (87)
.|.++..+.+|..+.+.+.++++.+...|| ++.+
T Consensus 114 aGid~~pI~ld~~~~~ei~~~Vkal~p~Fg-ginL 147 (432)
T COG0281 114 AGIDVLPIELDVGTNNEIIEFVKALEPTFG-GINL 147 (432)
T ss_pred cCCCceeeEeeCCChHHHHHHHHHhhhcCC-Ccce
Confidence 355678889999999999999999999998 6544
No 341
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]
Probab=44.65 E-value=60 Score=19.48 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=26.1
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
..+.+|=.|.+++.+.+++....-+ ++.++|.++
T Consensus 207 ~V~evdG~d~~~i~~a~~~~~~~~~-rP~~IIa~T 240 (243)
T COG3959 207 EVIEVDGHDIEEIVEALEKAKGSKG-RPTVIIAKT 240 (243)
T ss_pred eEEEEcCcCHHHHHHHHHhhhccCC-CCeEEEEec
Confidence 4566777788889888888877666 888888664
No 342
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=44.32 E-value=51 Score=17.66 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=28.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
|.++.....--.+++.+.+.++++. . +.|++|.+-|..... .+...+.+.+..
T Consensus 40 G~~v~~~~~v~Dd~~~i~~~l~~~~---~-~~DliIttGG~g~g~--~D~t~~ai~~~g 92 (144)
T TIGR00177 40 GFNVSRLGIVPDDPEEIREILRKAV---D-EADVVLTTGGTGVGP--RDVTPEALEELG 92 (144)
T ss_pred CCeEEEEeecCCCHHHHHHHHHHHH---h-CCCEEEECCCCCCCC--CccHHHHHHHhC
Confidence 3334433322334556666665553 3 689999886654322 355555555443
No 343
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=42.95 E-value=44 Score=21.55 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=24.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
.++.+.++|+.+.+++.+++++ .|++|+++...
T Consensus 47 ~~v~~~~vD~~d~~al~~li~~--------~d~VIn~~p~~ 79 (389)
T COG1748 47 GKVEALQVDAADVDALVALIKD--------FDLVINAAPPF 79 (389)
T ss_pred ccceeEEecccChHHHHHHHhc--------CCEEEEeCCch
Confidence 4788999999988777766543 37888877543
No 344
>PF13348 Y_phosphatase3C: Tyrosine phosphatase family C-terminal region; PDB: 1YWF_A 2OZ5_B.
Probab=41.79 E-value=30 Score=15.82 Aligned_cols=21 Identities=19% Similarity=0.382 Sum_probs=16.8
Q ss_pred ChHHHHHHHHHHHHHcCCCCcE
Q psy346 17 NTSTISTAMSAIKEKFSRPPNV 38 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~ 38 (87)
+++.+..+++.+.+.+| .++.
T Consensus 27 ~~e~l~~~l~~i~~~yG-s~e~ 47 (68)
T PF13348_consen 27 RPEYLEAALDAIDERYG-SVEN 47 (68)
T ss_dssp -HHHHHHHHHHHHHHHS-SHHH
T ss_pred cHHHHHHHHHHHHHHcC-CHHH
Confidence 57789999999999999 6554
No 345
>PRK06498 isocitrate lyase; Provisional
Probab=41.40 E-value=1.1e+02 Score=20.69 Aligned_cols=42 Identities=12% Similarity=0.183 Sum_probs=32.6
Q ss_pred CCCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 3 ~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
.++.+..++..+--+.+++..+.+.+++.++ .--...||..-
T Consensus 343 apyADLlW~ET~~P~~~qa~~fa~~Ir~~~P-~~~LaYN~SPS 384 (531)
T PRK06498 343 QNGADLLWIETEKPHVAQIAGMVNRIREVVP-NAKLVYNNSPS 384 (531)
T ss_pred cCcCcEEEecCCCCCHHHHHHHHHHHHHHCC-CCeEEecCCCC
Confidence 3566778888888888999999999999998 65556666544
No 346
>KOG3923|consensus
Probab=41.14 E-value=26 Score=21.97 Aligned_cols=14 Identities=36% Similarity=0.759 Sum_probs=12.0
Q ss_pred CCcEEEecccccCC
Q psy346 35 PPNVLVNCAGITRD 48 (87)
Q Consensus 35 ~~d~lv~~ag~~~~ 48 (87)
..|++|||+|....
T Consensus 183 ~~DVivNCtGL~a~ 196 (342)
T KOG3923|consen 183 EYDVIVNCTGLGAG 196 (342)
T ss_pred CCcEEEECCccccc
Confidence 79999999998654
No 347
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=41.04 E-value=67 Score=18.08 Aligned_cols=28 Identities=7% Similarity=0.195 Sum_probs=22.2
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcC
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFS 33 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g 33 (87)
.+..+..+|++|+..++.+-+-+.+.+-
T Consensus 22 ~gF~W~~~dl~d~~~l~ely~lL~~nYV 49 (162)
T PF01233_consen 22 DGFEWSTLDLNDDEELKELYELLNENYV 49 (162)
T ss_dssp TTEEEEE--TTSHHHHHHHHHHHHHHSS
T ss_pred CCCEEEecCCCCHHHHHHHHHHHHhcCc
Confidence 5678889999999999999999888873
No 348
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=40.94 E-value=66 Score=17.97 Aligned_cols=27 Identities=11% Similarity=0.322 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
|+..+..+...+......++|++|.|-
T Consensus 75 D~~~La~A~~~l~~al~~~~DLlivNk 101 (159)
T PF10649_consen 75 DPGALAEASAALRRALAEGADLLIVNK 101 (159)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 466777777777777653699998874
No 349
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=40.61 E-value=86 Score=19.20 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=29.1
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++++++.+... +.+..++.++..++++.
T Consensus 26 D~~~l~~li~~l~~~---Gv~Gi~~~Gst---GE~~~Lt~eEr~~~~~~ 68 (303)
T PRK03620 26 DEAAYREHLEWLAPY---GAAALFAAGGT---GEFFSLTPDEYSQVVRA 68 (303)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECcCC---cCcccCCHHHHHHHHHH
Confidence 667888888888763 69998765433 33446677777666553
No 350
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=40.59 E-value=83 Score=19.01 Aligned_cols=43 Identities=5% Similarity=0.013 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++|+++.+-.. +.+..++.++..++++.
T Consensus 18 D~~~~~~li~~l~~~---Gv~Gl~~~Gst---GE~~~Lt~eEr~~l~~~ 60 (279)
T cd00953 18 DKEKFKKHCENLISK---GIDYVFVAGTT---GLGPSLSFQEKLELLKA 60 (279)
T ss_pred CHHHHHHHHHHHHHc---CCcEEEEcccC---CCcccCCHHHHHHHHHH
Confidence 567888888888763 69998765433 33446666766666654
No 351
>PTZ00325 malate dehydrogenase; Provisional
Probab=39.62 E-value=95 Score=19.40 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=25.2
Q ss_pred HcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHH
Q psy346 31 KFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTA 77 (87)
Q Consensus 31 ~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 77 (87)
... ..|++|+++|..... . +.+...+..|+...-.+.+++
T Consensus 73 ~l~-gaDvVVitaG~~~~~---~---~tR~dll~~N~~i~~~i~~~i 112 (321)
T PTZ00325 73 ALR-GADLVLICAGVPRKP---G---MTRDDLFNTNAPIVRDLVAAV 112 (321)
T ss_pred HhC-CCCEEEECCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHH
Confidence 344 789999999984321 1 235667777877665554443
No 352
>KOG0094|consensus
Probab=38.87 E-value=84 Score=18.56 Aligned_cols=40 Identities=13% Similarity=0.253 Sum_probs=27.0
Q ss_pred CCceeeeeccCCChHH---HHHHHHHHHHHcCCCCcEEEecccc
Q psy346 5 SSTHLSLPMDVSNTST---ISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~---~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
+..+..+..|++|..+ ..+.++.+..+-| .-+++|.-.|-
T Consensus 94 ds~vaviVyDit~~~Sfe~t~kWi~dv~~e~g-s~~viI~LVGn 136 (221)
T KOG0094|consen 94 DSSVAVIVYDITDRNSFENTSKWIEDVRRERG-SDDVIIFLVGN 136 (221)
T ss_pred CCeEEEEEEeccccchHHHHHHHHHHHHhccC-CCceEEEEEcc
Confidence 3456777889988755 5556666666656 55677777765
No 353
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=38.77 E-value=91 Score=18.93 Aligned_cols=43 Identities=16% Similarity=0.263 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++++++.+... +.+..++.++..+.++.
T Consensus 19 D~~~l~~l~~~l~~~---Gv~gi~v~Gst---GE~~~Ls~eEr~~l~~~ 61 (289)
T cd00951 19 DEDAYRAHVEWLLSY---GAAALFAAGGT---GEFFSLTPDEYAQVVRA 61 (289)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECcCC---cCcccCCHHHHHHHHHH
Confidence 667888888888763 68988765443 33446666766666543
No 354
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=38.68 E-value=92 Score=18.97 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=29.1
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++|+++.+... +.+..++.++..++++.
T Consensus 24 D~~~l~~li~~l~~~---Gv~gi~v~Gst---GE~~~Lt~eEr~~v~~~ 66 (296)
T TIGR03249 24 DEAAYRENIEWLLGY---GLEALFAAGGT---GEFFSLTPAEYEQVVEI 66 (296)
T ss_pred CHHHHHHHHHHHHhc---CCCEEEECCCC---cCcccCCHHHHHHHHHH
Confidence 677888888888763 69998765333 33446666777766653
No 355
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=37.77 E-value=86 Score=20.16 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=19.3
Q ss_pred CCcEEEecccccCCcccccCCHHHHHHHHHhh
Q psy346 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n 66 (87)
.+|+++.+-|...+.+ .+...+.+++.+...
T Consensus 220 ~pDGiflSNGPGDP~~-~~~~i~~ik~l~~~~ 250 (368)
T COG0505 220 NPDGIFLSNGPGDPAP-LDYAIETIKELLGTK 250 (368)
T ss_pred CCCEEEEeCCCCChhH-HHHHHHHHHHHhccC
Confidence 6888888777765532 333445666666655
No 356
>cd06399 PB1_P40 The PB1 domain is essential part of the p40 adaptor protein which plays an important role in activating phagocyte NADPH oxidase during phagocytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes , such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domain of p40 represents a type I PB1 domain which interacts with the PB1 domain of oxidase activator p67 w
Probab=37.55 E-value=58 Score=16.37 Aligned_cols=53 Identities=13% Similarity=0.288 Sum_probs=35.2
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
..+.-|++.....+.++...++.|+ .-|+..|-- ......+.-++.++..-++
T Consensus 18 i~vee~l~~~P~~kdLl~lmr~~f~-~~dIaLNYr-D~EGDLIRllddeDv~LMV 70 (92)
T cd06399 18 IAVEEDLSSTPLLKDLLELTRREFQ-REDIALNYR-DAEGDLIRLLSDEDVALMV 70 (92)
T ss_pred eEeecccccCccHHHHHHHHHHHhc-hhheeeeee-cCCCCEEEEcchhhHHHHH
Confidence 4566788877788999999999998 778765532 2222334445556655544
No 357
>PRK07058 acetate kinase; Provisional
Probab=37.20 E-value=75 Score=20.65 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=15.1
Q ss_pred HHHHcCCCCcEEEecccccCC
Q psy346 28 IKEKFSRPPNVLVNCAGITRD 48 (87)
Q Consensus 28 ~~~~~g~~~d~lv~~ag~~~~ 48 (87)
....+| ++|.+|+.+|+...
T Consensus 312 ~~a~Lg-~vDaiVfTGGIgEn 331 (396)
T PRK07058 312 LAATLG-GLDAVVFTAGIGEH 331 (396)
T ss_pred HHHHhC-CCCEEEECCccccC
Confidence 334457 99999999999743
No 358
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=37.15 E-value=89 Score=19.58 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=21.2
Q ss_pred ccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 13 ~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
-|+++++.++.-++-+++. +||+++..-
T Consensus 52 Ydl~~p~v~~~Q~~lA~~~---GI~gF~~~~ 79 (345)
T PF14307_consen 52 YDLRDPEVMEKQAELAKEY---GIDGFCFYH 79 (345)
T ss_pred ccCCCHHHHHHHHHHHHHh---CCCEEEEEe
Confidence 3888998888887777654 599987654
No 359
>PRK12440 acetate kinase; Reviewed
Probab=36.98 E-value=72 Score=20.72 Aligned_cols=21 Identities=10% Similarity=0.194 Sum_probs=15.8
Q ss_pred HHHHcCCCCcEEEecccccCCc
Q psy346 28 IKEKFSRPPNVLVNCAGITRDN 49 (87)
Q Consensus 28 ~~~~~g~~~d~lv~~ag~~~~~ 49 (87)
....++ ++|.+|+.+|+....
T Consensus 314 ~~a~l~-gvDaiVFTgGIGen~ 334 (397)
T PRK12440 314 YLAALD-SLDGIIFTGGIGENS 334 (397)
T ss_pred HHHHhC-CCCEEEECCccccCc
Confidence 333457 899999999997654
No 360
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=36.90 E-value=77 Score=17.53 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=31.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
|..+..+..=-.|.+.+.+.++++.+. . ..|+++.+-|.... ..+...+-+...+
T Consensus 35 G~~v~~~~iv~Dd~~~i~~~l~~~~~~-~-~~DlVIttGGtg~g--~~D~t~eal~~l~ 89 (163)
T TIGR02667 35 GHRLADRAIVKDDIYQIRAQVSAWIAD-P-DVQVILITGGTGFT--GRDVTPEALEPLF 89 (163)
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHhc-C-CCCEEEECCCcCCC--CCCCcHHHHHHHH
Confidence 444444433334666777777665432 3 68999988665432 2355556555553
No 361
>PRK12397 propionate kinase; Reviewed
Probab=35.45 E-value=77 Score=20.66 Aligned_cols=18 Identities=22% Similarity=0.357 Sum_probs=14.4
Q ss_pred HcCCCCcEEEecccccCCc
Q psy346 31 KFSRPPNVLVNCAGITRDN 49 (87)
Q Consensus 31 ~~g~~~d~lv~~ag~~~~~ 49 (87)
..| ++|.+|+.+|+....
T Consensus 318 ~lg-gvDaiVFTGGIGEns 335 (404)
T PRK12397 318 QMG-GLDALVFTGGIGENS 335 (404)
T ss_pred HhC-CCCEEEECCchhhCC
Confidence 357 899999999987543
No 362
>COG3310 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.25 E-value=88 Score=17.74 Aligned_cols=60 Identities=10% Similarity=-0.032 Sum_probs=33.9
Q ss_pred cCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHH
Q psy346 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGG 75 (87)
Q Consensus 14 D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 75 (87)
|+-|.-+....++.+.... ++.+++.-|...+.--+...++++..+.-+-.-...+++.+
T Consensus 90 DF~d~n~~ld~~dA~i~~~--~~egilQvAsFHPd~~FagtdpdD~~N~TNRsPyPilHLiR 149 (196)
T COG3310 90 DFDDFNDMLDIADAAIVEN--GLEGILQVASFHPDFQFAGTDPDDIGNYTNRSPYPILHLIR 149 (196)
T ss_pred hhhHHHHHHHHHHHHHHhc--CcceeEeeeccCCCceecCCChhhhhccccCCCchHHHHHH
Confidence 5555555555555555544 47777766665555456666667666555444444444443
No 363
>PF07209 DUF1415: Protein of unknown function (DUF1415); InterPro: IPR009858 This family consists of several hypothetical bacterial proteins of around 180 residues in length. The function of this family is unknown.
Probab=35.16 E-value=90 Score=17.81 Aligned_cols=42 Identities=10% Similarity=-0.116 Sum_probs=22.5
Q ss_pred CCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHH
Q psy346 35 PPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGT 76 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 76 (87)
++++++.-|+..+.-.|...+.++..+.-+-.-...+++.+.
T Consensus 98 ~~eG~~QlAsFHP~y~F~g~~~dd~~NyTNRSPyP~lHLLRE 139 (174)
T PF07209_consen 98 GLEGVYQLASFHPDYQFAGTEPDDASNYTNRSPYPMLHLLRE 139 (174)
T ss_pred CCCceEEEeccCccCCCCCcCccchhhhhcCCCchHHHHHHH
Confidence 366666666555444455555555555555445555555543
No 364
>PF15513 DUF4651: Domain of unknown function (DUF4651)
Probab=35.01 E-value=54 Score=15.27 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccc
Q psy346 19 STISTAMSAIKEKFSRPPNVLVNCAG 44 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~d~lv~~ag 44 (87)
+.+.+.+.+..+.+| .|.+|..|.-
T Consensus 5 e~i~~~iR~~fs~lG-~I~vLYvn~~ 29 (62)
T PF15513_consen 5 EEITAEIRQFFSQLG-EIAVLYVNPY 29 (62)
T ss_pred HHHHHHHHHHHHhcC-cEEEEEEccc
Confidence 345555555566678 9999987753
No 365
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=34.73 E-value=1.2e+02 Score=18.99 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=26.1
Q ss_pred HHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q psy346 30 EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDF 84 (87)
Q Consensus 30 ~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 84 (87)
+.+. ..|++|+.||..... . +++...+..|+.-. +.+.+.+.+.
T Consensus 71 ~~~~-~aDiVVitAG~~~~~---~---~tr~~ll~~N~~i~----k~i~~~i~~~ 114 (324)
T TIGR01758 71 VAFT-DVDVAILVGAFPRKE---G---MERRDLLSKNVKIF----KEQGRALDKL 114 (324)
T ss_pred HHhC-CCCEEEEcCCCCCCC---C---CcHHHHHHHHHHHH----HHHHHHHHhh
Confidence 4455 799999999985331 1 23556666666544 4444444443
No 366
>KOG0747|consensus
Probab=34.67 E-value=34 Score=21.33 Aligned_cols=65 Identities=8% Similarity=-0.026 Sum_probs=40.8
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
.....++++.|+.+...+..++.. . ++|.++|-|+........--+. .....|+.+...+.++..
T Consensus 55 n~p~ykfv~~di~~~~~~~~~~~~-----~-~id~vihfaa~t~vd~s~~~~~----~~~~nnil~t~~Lle~~~ 119 (331)
T KOG0747|consen 55 NSPNYKFVEGDIADADLVLYLFET-----E-EIDTVIHFAAQTHVDRSFGDSF----EFTKNNILSTHVLLEAVR 119 (331)
T ss_pred cCCCceEeeccccchHHHHhhhcc-----C-chhhhhhhHhhhhhhhhcCchH----HHhcCCchhhhhHHHHHH
Confidence 345678888999887776665544 3 7999999888754322111122 224557777777766654
No 367
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase. A closely related enzyme, phosphonopyruvate hydrolase from Variovorax sp. Pal2, is excluded from this model.
Probab=33.84 E-value=1.1e+02 Score=18.81 Aligned_cols=35 Identities=3% Similarity=0.133 Sum_probs=22.6
Q ss_pred CCCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEE
Q psy346 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVL 39 (87)
Q Consensus 4 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~l 39 (87)
.|.++.++..-..+++.+.++.+.+...++ ++-++
T Consensus 181 AGAD~ifv~~~~~~~~ei~~~~~~~~~~~p-~~pl~ 215 (285)
T TIGR02320 181 AGADGIMIHSRKKDPDEILEFARRFRNHYP-RTPLV 215 (285)
T ss_pred cCCCEEEecCCCCCHHHHHHHHHHhhhhCC-CCCEE
Confidence 566677666445677888888888765555 44443
No 368
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=33.68 E-value=1.2e+02 Score=18.73 Aligned_cols=43 Identities=7% Similarity=0.013 Sum_probs=28.8
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++++++.+-.. +.+..++.++..++++.
T Consensus 27 D~~~l~~lv~~li~~---Gv~Gi~v~Gst---GE~~~Lt~eEr~~v~~~ 69 (309)
T cd00952 27 DLDETARLVERLIAA---GVDGILTMGTF---GECATLTWEEKQAFVAT 69 (309)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECccc---ccchhCCHHHHHHHHHH
Confidence 567888888888763 68988765433 33446666776666653
No 369
>PRK12379 propionate/acetate kinase; Provisional
Probab=33.54 E-value=93 Score=20.24 Aligned_cols=20 Identities=10% Similarity=0.219 Sum_probs=15.2
Q ss_pred HHHcCCCCcEEEecccccCCc
Q psy346 29 KEKFSRPPNVLVNCAGITRDN 49 (87)
Q Consensus 29 ~~~~g~~~d~lv~~ag~~~~~ 49 (87)
...++ ++|.+|+.+|+....
T Consensus 312 ~a~L~-~vDaIVFTGGIGen~ 331 (396)
T PRK12379 312 AASLH-RLDGIIFTGGIGENS 331 (396)
T ss_pred HHHhC-CCCEEEECCccccCc
Confidence 33457 899999999987643
No 370
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=32.84 E-value=92 Score=17.55 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHcCCC--CcEEEeccccc
Q psy346 19 STISTAMSAIKEKFSRP--PNVLVNCAGIT 46 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~--~d~lv~~ag~~ 46 (87)
..+...++++++.++ . +=++=||+|..
T Consensus 62 ~~~~~~~~~l~~~~~-~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 62 PEYAEWLNELKKQFG-KDRVLIVSNSAGSS 90 (168)
T ss_pred HHHHHHHHHHHHHCC-CCeEEEEECCCCcc
Confidence 468888999998887 4 44444556654
No 371
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=32.73 E-value=1.1e+02 Score=18.30 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+...+.++.+.+. ++++++.+ |.. +....++.++..++++.
T Consensus 19 D~~~~~~~i~~l~~~---Gv~gl~v~-Gst--GE~~~lt~~Er~~l~~~ 61 (284)
T cd00950 19 DFDALERLIEFQIEN---GTDGLVVC-GTT--GESPTLSDEEHEAVIEA 61 (284)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEEC-CCC--cchhhCCHHHHHHHHHH
Confidence 567788888887763 68888876 333 23346677777766654
No 372
>COG2441 Predicted butyrate kinase [Energy production and conversion]
Probab=32.46 E-value=73 Score=19.96 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCC-cccccCCH
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTE 56 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~-~~~~~~~~ 56 (87)
++.-+..++++...+.+ ++|.++-..|..-+ .+..+.+.
T Consensus 36 ~p~iiv~ii~e~~~e~g-~~daivgpSGyGlPlk~are~~~ 75 (374)
T COG2441 36 SPRIIVDIIEEVQAEVG-GIDAIVGPSGYGLPLKRAREATN 75 (374)
T ss_pred CchHHHHHHHHHhhhhc-cccceeccccCCCcccchhhCCc
Confidence 45567788899988888 99999877776433 44444443
No 373
>PRK09417 mogA molybdenum cofactor biosynthesis protein MogA; Provisional
Probab=32.02 E-value=1.1e+02 Score=17.69 Aligned_cols=51 Identities=10% Similarity=0.105 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHH
Q psy346 16 SNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLV 70 (87)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 70 (87)
.+.+.+.+.+..+.+. . ..|++|.+-|.... ..+.+.+.+..++.--+-|.
T Consensus 49 Dd~~~I~~aL~~a~~~-~-~~DlIITTGGtg~g--~rDvTpeAv~~l~~keipG~ 99 (193)
T PRK09417 49 DEQDLIEQTLIELVDE-M-GCDLVLTTGGTGPA--RRDVTPEATLAVADKEMPGF 99 (193)
T ss_pred CCHHHHHHHHHHHhhc-C-CCCEEEECCCCCCC--CCCcHHHHHHHHhCCcCCcH
Confidence 3456666666666442 3 68999988665422 23556666666555444333
No 374
>COG4755 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.64 E-value=18 Score=19.50 Aligned_cols=31 Identities=13% Similarity=0.171 Sum_probs=24.1
Q ss_pred eeeeccCCChHHHHHHHHHHHHHcCCCCcEEEe
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVN 41 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~ 41 (87)
..+.+|+....++++++++...+ | +++-++.
T Consensus 98 ~lielDIrHTSq~kelisk~srE-G-kl~pvl~ 128 (151)
T COG4755 98 KLIELDIRHTSQYKELISKFSRE-G-KLPPVLM 128 (151)
T ss_pred HHHHHhHHhHHHHHHHHHHHhhc-C-CCCchHH
Confidence 35678999999999999998765 5 7776654
No 375
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=30.59 E-value=1.3e+02 Score=18.18 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+..++.++.+.+. ++++++.+... +....++.++..++++.
T Consensus 20 d~~~~~~~i~~l~~~---Gv~gl~~~Gst---GE~~~Lt~~Er~~l~~~ 62 (289)
T PF00701_consen 20 DEDALKRLIDFLIEA---GVDGLVVLGST---GEFYSLTDEERKELLEI 62 (289)
T ss_dssp -HHHHHHHHHHHHHT---TSSEEEESSTT---TTGGGS-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECCCC---cccccCCHHHHHHHHHH
Confidence 677888888888764 58888765433 34456777777776654
No 376
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=30.58 E-value=1.4e+02 Score=18.66 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=23.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
|..+.....=-.|++.+.+.+..+.+. ..|++|.+.|...
T Consensus 192 G~~v~~~~iv~Dd~~~I~~ai~~~~~~---g~DlIItTGGtsv 231 (312)
T cd03522 192 GVELVEQVIVPHDEAAIAAAIAEALEA---GAELLILTGGASV 231 (312)
T ss_pred CCEEEEEEEcCCCHHHHHHHHHHHhcC---CCCEEEEeCCccc
Confidence 344443333334556677666665432 3799998887753
No 377
>PTZ00285 glucosamine-6-phosphate isomerase; Provisional
Probab=30.44 E-value=1.2e+02 Score=17.98 Aligned_cols=40 Identities=5% Similarity=-0.023 Sum_probs=22.0
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
.++.+..+..++++.....++..+..+ ++|+++..-|..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~y~~~i~~~~-~~Dl~lLG~G~DG 142 (253)
T PTZ00285 103 NRHILNGTAPDLEEECRRYEEKIRAVG-GIDLFLAGIGTDG 142 (253)
T ss_pred hEEcCCCCCcCHHHHHHHHHHHHHHhC-CCcEEEeCCCCCC
Confidence 344444444454433333344444557 8999998777643
No 378
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=30.02 E-value=1.3e+02 Score=18.17 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=27.6
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHH
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~ 64 (87)
|.+...+.++.+.+. ++++++.+. .. +.+..++.++..+.++
T Consensus 20 D~~~l~~~i~~l~~~---Gv~gi~~~G-s~--GE~~~ls~~Er~~~~~ 61 (292)
T PRK03170 20 DFAALRKLVDYLIAN---GTDGLVVVG-TT--GESPTLTHEEHEELIR 61 (292)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECC-cC--CccccCCHHHHHHHHH
Confidence 567888888888763 699988653 33 2334566666666654
No 379
>PF14355 Abi_C: Abortive infection C-terminus
Probab=29.95 E-value=73 Score=15.17 Aligned_cols=29 Identities=24% Similarity=0.188 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEecccccCC
Q psy346 19 STISTAMSAIKEKFSRPPNVLVNCAGITRD 48 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~ 48 (87)
+.+++++..+..... .+.-+.|..|..+.
T Consensus 22 ~~ik~il~~l~~i~~-~i~~lRN~~g~~HG 50 (80)
T PF14355_consen 22 KDIKKILSSLNSIVS-GINELRNKYGDAHG 50 (80)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHCCCCCCCC
Confidence 355666666555444 56667777775544
No 380
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=29.91 E-value=47 Score=20.25 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=25.2
Q ss_pred eccCCChHHHHHHHHHHHHHcCCCCcEEEecccccC
Q psy346 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
..|+|.|+.....++.+.+. ++..+|-..|...
T Consensus 73 ~IDFT~P~~~~~~l~~~~~~---~~~lVIGTTGf~~ 105 (266)
T COG0289 73 LIDFTTPEATLENLEFALEH---GKPLVIGTTGFTE 105 (266)
T ss_pred EEECCCchhhHHHHHHHHHc---CCCeEEECCCCCH
Confidence 46999999999988888774 5777776666643
No 381
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=29.59 E-value=1.3e+02 Score=18.12 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.+.++.+.+. ++++++.+. .. +....++.++..++++.
T Consensus 17 D~~~~~~~i~~l~~~---Gv~Gi~~~G-st--GE~~~Ls~~Er~~~~~~ 59 (285)
T TIGR00674 17 DFAALEKLIDFQIEN---GTDAIVVVG-TT--GESPTLSHEEHKKVIEF 59 (285)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECc-cC--cccccCCHHHHHHHHHH
Confidence 567788888887663 689987643 32 23446666777666653
No 382
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=29.34 E-value=1.4e+02 Score=18.35 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=28.8
Q ss_pred CChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 16 SNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
-|.+++.++++.+.+. ++|+++.+- ..+. ...++.++..++++.
T Consensus 22 vD~~a~~~lv~~li~~---Gv~gi~~~G-ttGE--~~~Ls~eEr~~v~~~ 65 (299)
T COG0329 22 VDEEALRRLVEFLIAA---GVDGLVVLG-TTGE--SPTLTLEERKEVLEA 65 (299)
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEECC-CCcc--chhcCHHHHHHHHHH
Confidence 3678889999988774 689887653 3322 335566666665543
No 383
>PF11965 DUF3479: Domain of unknown function (DUF3479); InterPro: IPR022571 This functionally uncharacterised domain, found N-terminal to PF02514 from PFAM, occurs in magnesium chelatase subunit H, which is involved in chlorophyll biosynthesis. It is found in bacteria, green plants and archaea. It is around 160 amino acids in length.; GO: 0016851 magnesium chelatase activity
Probab=29.05 E-value=1e+02 Score=17.34 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=23.1
Q ss_pred eeeeeccCCChHHHHHHHHHHHHH-cCCCCcEEEeccccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEK-FSRPPNVLVNCAGIT 46 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~-~g~~~d~lv~~ag~~ 46 (87)
+.++..|-.-..++.+..+.+... .. ++++.+|+++-.
T Consensus 3 ~V~vtld~~~~~al~~aa~~l~~~~~p-~l~l~~~~~~el 41 (164)
T PF11965_consen 3 FVIVTLDEHYNSALYRAAARLNRDHCP-GLELSVFAAAEL 41 (164)
T ss_pred EEEEeCchhhhHHHHHHHHHHhhccCC-CeEEEEEeHHHh
Confidence 445555555445666666666665 44 677777777654
No 384
>PRK09461 ansA cytoplasmic asparaginase I; Provisional
Probab=28.86 E-value=1.2e+02 Score=19.01 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=23.0
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
.++++..+.+.+.+.+. ..|++|...|.
T Consensus 64 t~~~w~~la~~I~~~~~-~~dG~VVtHGT 91 (335)
T PRK09461 64 TPEDWQHIADDIKANYD-DYDGFVILHGT 91 (335)
T ss_pred CHHHHHHHHHHHHHHhc-cCCeEEEeecc
Confidence 35788999999988887 89999877775
No 385
>TIGR00502 nagB glucosamine-6-phosphate isomerase. The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.
Probab=28.84 E-value=1.3e+02 Score=17.88 Aligned_cols=37 Identities=5% Similarity=0.006 Sum_probs=23.1
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
++.+..+..+++......++..+.++ .+|+++...|.
T Consensus 104 i~~~~~~~~~~~~~a~~y~~~i~~~~-~~Dl~llG~G~ 140 (259)
T TIGR00502 104 INILNGNAPDLEAECRRYEEKIRSYG-GIDLFMGGIGP 140 (259)
T ss_pred EecCCCCccCHHHHHHHHHHHHHHcC-CCCEEEEccCC
Confidence 44444444455444445556556677 89999988776
No 386
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=28.51 E-value=1.5e+02 Score=18.17 Aligned_cols=43 Identities=9% Similarity=-0.024 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. ++++++.+... +.+..++.++..++++.
T Consensus 19 D~~~l~~lv~~~~~~---Gv~gi~v~Gst---GE~~~Ls~~Er~~l~~~ 61 (294)
T TIGR02313 19 DEEALRELIEFQIEG---GSHAISVGGTS---GEPGSLTLEERKQAIEN 61 (294)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECccC---cccccCCHHHHHHHHHH
Confidence 667888888888763 68888765433 33446666766666653
No 387
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=28.51 E-value=2.1e+02 Score=19.90 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=29.6
Q ss_pred ceeeeeccCC---ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccC
Q psy346 7 THLSLPMDVS---NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL 54 (87)
Q Consensus 7 ~v~~~~~D~~---~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~ 54 (87)
.+..+.+|-. |.+.+++.+++..+... ++=.+|.++|....+.+..+
T Consensus 248 ~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~-p~~~VVataGTT~~GaiDpl 297 (608)
T TIGR03811 248 QVIPVPVDSNYRMDINELEKIIRKLAAEKT-PILGVVGVVGSTEEGAVDGI 297 (608)
T ss_pred cEEEeecCCCCcCCHHHHHHHHHHHHhcCC-CeEEEEEEcCCcCCcccCCH
Confidence 4566666643 56677777777666533 45567888888766544433
No 388
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=28.33 E-value=97 Score=16.10 Aligned_cols=32 Identities=9% Similarity=0.261 Sum_probs=21.4
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
+..|+|.++.+...++.+.+. +..+++-..|.
T Consensus 70 VvIDfT~p~~~~~~~~~~~~~---g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTNPDAVYDNLEYALKH---GVPLVIGTTGF 101 (124)
T ss_dssp EEEEES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred EEEEcCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence 346889999888888888776 46677655555
No 389
>PHA02046 hypothetical protein
Probab=28.08 E-value=93 Score=15.82 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=14.2
Q ss_pred eeccCCChHHHHHHHHHHHHH
Q psy346 11 LPMDVSNTSTISTAMSAIKEK 31 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~ 31 (87)
|.||..|..++..+-++..+.
T Consensus 52 ItcdpaD~~~m~~Lr~e~~~~ 72 (99)
T PHA02046 52 ITCDPADTINIDRLREEFRQA 72 (99)
T ss_pred cccCcccHHHHHHHHHHHHHH
Confidence 567777777777776666543
No 390
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=28.02 E-value=1.2e+02 Score=19.71 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=13.3
Q ss_pred Hc-CCCCcEEEecccccC
Q psy346 31 KF-SRPPNVLVNCAGITR 47 (87)
Q Consensus 31 ~~-g~~~d~lv~~ag~~~ 47 (87)
.+ | ++|.+|+..|+..
T Consensus 319 ~L~g-~vDaiVfTGGIgE 335 (402)
T PRK00180 319 ALNG-RLDAIVFTAGIGE 335 (402)
T ss_pred HhcC-CCCEEEEcCcccc
Confidence 34 6 8999999999873
No 391
>KOG2865|consensus
Probab=27.90 E-value=82 Score=19.92 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=27.3
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD 48 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~ 48 (87)
-+++.++..|+.|++++++++.. -+++||-.|...+
T Consensus 108 LGQvl~~~fd~~DedSIr~vvk~--------sNVVINLIGrd~e 143 (391)
T KOG2865|consen 108 LGQVLFMKFDLRDEDSIRAVVKH--------SNVVINLIGRDYE 143 (391)
T ss_pred ccceeeeccCCCCHHHHHHHHHh--------CcEEEEeeccccc
Confidence 36788899999999998887654 3578888886433
No 392
>PRK05398 formyl-coenzyme A transferase; Provisional
Probab=27.73 E-value=1.7e+02 Score=19.03 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=19.4
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
-..+.+|+.+++..+.+.+-+. .-|++|.|-
T Consensus 67 Krsi~lDLk~~eGr~~l~~Lv~-----~ADVvien~ 97 (416)
T PRK05398 67 KRSITLDTKTPEGKEVLEKLIR-----EADVLVENF 97 (416)
T ss_pred CeEEEeeCCCHHHHHHHHHHHh-----cCCEEEECC
Confidence 3456789988877555544432 467777663
No 393
>PRK03604 moaC bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional
Probab=27.72 E-value=1.6e+02 Score=18.45 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=34.2
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKL 69 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 69 (87)
|..+..+..--.|++.+.+.+..+.. . ..|++|.+-|... + ..+.+.+-+....+..+.+
T Consensus 188 G~~v~~~~iVpDD~~~I~~al~~a~~--~-~~DlIITTGGtg~-g-~~D~tpeAl~~lg~~~~~G 247 (312)
T PRK03604 188 GFEVSHYTIIPDEPAEIAAAVAAWIA--E-GYALIITTGGTGL-G-PRDVTPEALAPLLERRLPG 247 (312)
T ss_pred CCEEEEEEEcCCCHHHHHHHHHHhhh--C-CCCEEEECCCCCC-C-CCccHHHHHHHhcCccccc
Confidence 34444444434566666666665532 3 6888888766542 2 2366667676665544444
No 394
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=27.69 E-value=1e+02 Score=16.14 Aligned_cols=42 Identities=10% Similarity=0.161 Sum_probs=25.3
Q ss_pred CChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 16 SNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 16 ~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
.|++.+.+.+.++. . ..|++|.+-|.. . ...+.+.+-+.+..
T Consensus 42 Dd~~~I~~~l~~~~---~-~~dliittGG~g-~-g~~D~t~~~l~~~~ 83 (135)
T smart00852 42 DDKEAIKEALREAL---E-RADLVITTGGTG-P-GPDDVTPEAVAEAL 83 (135)
T ss_pred CCHHHHHHHHHHHH---h-CCCEEEEcCCCC-C-CCCcCcHHHHHHHh
Confidence 45566666665554 3 578888876654 2 23366666666554
No 395
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=27.01 E-value=1.5e+02 Score=18.95 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=22.3
Q ss_pred eeeccC--CChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 10 SLPMDV--SNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 10 ~~~~D~--~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
.+..|. ...+.+...+..+++.++ .+.++.=|.
T Consensus 123 ~ivID~a~g~s~~~~~~ik~ik~~~~-~~~viaGNV 157 (352)
T PF00478_consen 123 VIVIDSAHGHSEHVIDMIKKIKKKFP-DVPVIAGNV 157 (352)
T ss_dssp EEEEE-SSTTSHHHHHHHHHHHHHST-TSEEEEEEE
T ss_pred EEEccccCccHHHHHHHHHHHHHhCC-CceEEeccc
Confidence 334454 345667778888988888 888876554
No 396
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=26.96 E-value=1.6e+02 Score=18.29 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=26.5
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
++.+.++-.+.+...++.+.+.+.++ .+++-++..|.
T Consensus 267 vTi~~G~~~~~~~a~~l~~~l~~~~p-~~eve~~~GgQ 303 (313)
T PF13684_consen 267 VTIYYGEDVSEEEAEALAEFLEEKYP-DVEVEVYDGGQ 303 (313)
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHhC-CeEEEEEECCC
Confidence 45555555556678888888888887 78887776654
No 397
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional
Probab=26.95 E-value=1.7e+02 Score=18.59 Aligned_cols=50 Identities=14% Similarity=0.069 Sum_probs=25.7
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHH
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQV 62 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~ 62 (87)
.-.++..|..= ...+.++.+.+ ++|+++.+.|.........++.++..++
T Consensus 220 ~tvy~sGDT~~----~~~~~~i~~~~--~iDvall~iG~~p~~~~~hm~p~ea~~~ 269 (355)
T PRK11709 220 GNIYHSGDSHY----SNYFAKHGNDH--QIDVALGSYGENPRGITDKMTSIDILRM 269 (355)
T ss_pred eEEEEeCCCCc----cHHHHHHHhcC--CCCEEEecCCCCCCCCcCCCCHHHHHHH
Confidence 33456666532 22334444444 5999988887532222234555554443
No 398
>PLN02417 dihydrodipicolinate synthase
Probab=26.90 E-value=1.5e+02 Score=17.91 Aligned_cols=43 Identities=5% Similarity=-0.072 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.+.++.+.+. ++++++.+... +.+..++.++..++++.
T Consensus 20 D~~~~~~~i~~l~~~---Gv~Gi~~~Gst---GE~~~ls~~Er~~~~~~ 62 (280)
T PLN02417 20 DLEAYDSLVNMQIEN---GAEGLIVGGTT---GEGQLMSWDEHIMLIGH 62 (280)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECccC---cchhhCCHHHHHHHHHH
Confidence 667888888888763 68888765333 33446667777766654
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=26.70 E-value=1.3e+02 Score=17.13 Aligned_cols=30 Identities=7% Similarity=0.112 Sum_probs=14.7
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
+..+.+|..+++++.+++ . +.|.++++.+.
T Consensus 45 ~~vv~~d~~~~~~l~~al-------~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 45 AEVVEADYDDPESLVAAL-------K-GVDAVFSVTPP 74 (233)
T ss_dssp TEEEES-TT-HHHHHHHH-------T-TCSEEEEESSC
T ss_pred ceEeecccCCHHHHHHHH-------c-CCceEEeecCc
Confidence 345566666555544332 2 46666665553
No 400
>PF14069 SpoVIF: Stage VI sporulation protein F
Probab=26.63 E-value=92 Score=15.26 Aligned_cols=22 Identities=5% Similarity=0.202 Sum_probs=17.8
Q ss_pred eccCCChHHHHHHHHHHHHHcC
Q psy346 12 PMDVSNTSTISTAMSAIKEKFS 33 (87)
Q Consensus 12 ~~D~~~~~~~~~~~~~~~~~~g 33 (87)
..|+.|+..++.++..+.+..+
T Consensus 24 ~adlqdE~~vR~lIk~vs~~an 45 (79)
T PF14069_consen 24 KADLQDEKKVRQLIKQVSQIAN 45 (79)
T ss_pred hhhcccHHHHHHHHHHHHHHhC
Confidence 4688899999999999877655
No 401
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=26.37 E-value=1.2e+02 Score=20.75 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=21.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEK 31 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~ 31 (87)
++.+++.+|+.|.+++++++.++.+.
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~ 430 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILAT 430 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhc
Confidence 35677889999999999999998764
No 402
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=26.21 E-value=1.5e+02 Score=17.68 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=26.9
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHH
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~ 64 (87)
|.+.+.+.++.+.+. ++++++.+... +.+..++.++..++++
T Consensus 16 D~~~~~~~i~~l~~~---Gv~gi~~~Gst---GE~~~ls~~Er~~l~~ 57 (281)
T cd00408 16 DLDALRRLVEFLIEA---GVDGLVVLGTT---GEAPTLTDEERKEVIE 57 (281)
T ss_pred CHHHHHHHHHHHHHc---CCCEEEECCCC---cccccCCHHHHHHHHH
Confidence 567788888888764 58887765433 3344566666666554
No 403
>TIGR03253 oxalate_frc formyl-CoA transferase. This enzyme, formyl-CoA transferase, transfers coenzyme A from formyl-CoA to oxalate. It forms a pathway, together with oxalyl-CoA decarboxylase, for oxalate degradation; decarboxylation by the latter gene regenerates formyl-CoA. The two enzymes typically are encoded by a two-gene operon.
Probab=26.15 E-value=1.8e+02 Score=18.81 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=19.9
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
-..+.+|+.+++..+.+.+-++ .-|++|.|-
T Consensus 66 Krsi~lDLk~~~g~~~l~~Lv~-----~ADVvien~ 96 (415)
T TIGR03253 66 KRSITLNTKTPEGKEVLEELIK-----KADVMVENF 96 (415)
T ss_pred CeEEEeeCCCHHHHHHHHHHHh-----hCCEEEECC
Confidence 3556789988877555544442 467777765
No 404
>KOG3148|consensus
Probab=25.93 E-value=1.5e+02 Score=17.41 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=22.1
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
..++..-.+..|.+.-+..++.-.++.| ++|.+|-..|.
T Consensus 102 ~n~hildgna~dl~aec~~fe~kikeag-gidlfvggigp 140 (273)
T KOG3148|consen 102 ANIHILDGNAADLQAECDAFERKIKEAG-GIDLFVGGIGP 140 (273)
T ss_pred ccceeecCchHHHHHHHHHHHHHHHhcC-CeEEEeeccCC
Confidence 3455555555665544444444444456 79998855554
No 405
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=25.69 E-value=2.2e+02 Score=19.35 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=29.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
-++.+..+-.+++..+.+.+.+.+.++ .+++-++..|..
T Consensus 483 lvTi~~G~~~~~~~~~~l~~~i~~~~~-~veve~~~GgQ~ 521 (530)
T TIGR03599 483 LITIFYGEDATEEEAEELEAFIEEKYP-DVEVEIYEGGQP 521 (530)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHhhCC-CcEEEEEECCCC
Confidence 345556666666788889999999998 899988876653
No 406
>COG5583 Uncharacterized small protein [Function unknown]
Probab=25.46 E-value=56 Score=14.66 Aligned_cols=23 Identities=17% Similarity=0.387 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 20 TISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 20 ~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
.+.++++.+ .|| .+.+.||+.-+
T Consensus 13 kI~~~Le~l--kyG-sV~ItVhdgqV 35 (54)
T COG5583 13 KIKKALEGL--KYG-SVTITVHDGQV 35 (54)
T ss_pred HHHHHHhhc--ccc-eEEEEEECCEE
Confidence 344444444 478 88888887543
No 407
>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight
Probab=25.22 E-value=1.3e+02 Score=16.68 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=16.9
Q ss_pred CCceeeeeccCCChHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSA 27 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~ 27 (87)
+..+..+..|++++++.+++...
T Consensus 76 ~ad~~ilvyDit~~~Sf~~~~~~ 98 (182)
T cd04172 76 DSDAVLICFDISRPETLDSVLKK 98 (182)
T ss_pred CCCEEEEEEECCCHHHHHHHHHH
Confidence 45667788999999887776433
No 408
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional
Probab=25.11 E-value=1.8e+02 Score=18.78 Aligned_cols=31 Identities=3% Similarity=0.226 Sum_probs=19.8
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEec
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNC 42 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ 42 (87)
.-..+.+|+.+++..+.+.+-++ .-|++|.|
T Consensus 65 gKrsi~LDLk~~~Gr~~l~~Li~-----~ADVvien 95 (405)
T PRK03525 65 NLHALSLNIFKDEGREAFLKLME-----TTDIFIEA 95 (405)
T ss_pred CCeeEEEeCCCHHHHHHHHHHHH-----hCCEEEEC
Confidence 34567789988877655544442 45677766
No 409
>PLN02775 Probable dihydrodipicolinate reductase
Probab=24.67 E-value=57 Score=20.12 Aligned_cols=33 Identities=6% Similarity=0.080 Sum_probs=25.6
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEeccccc
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT 46 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~ 46 (87)
+..|+|.++.+...+..+.+. ++..++-..|..
T Consensus 83 VvIDFT~P~a~~~~~~~~~~~---g~~~VvGTTG~~ 115 (286)
T PLN02775 83 IVVDYTLPDAVNDNAELYCKN---GLPFVMGTTGGD 115 (286)
T ss_pred EEEECCChHHHHHHHHHHHHC---CCCEEEECCCCC
Confidence 568999999999988888764 577777666654
No 410
>PF08952 DUF1866: Domain of unknown function (DUF1866) ; InterPro: IPR015047 This domain, found in synaptojanin, has no known function. ; PDB: 1UFW_A 2DNR_A.
Probab=24.62 E-value=26 Score=19.28 Aligned_cols=23 Identities=13% Similarity=0.261 Sum_probs=4.3
Q ss_pred hHHHHHHHHHHHHHcCCCCcEEEe
Q psy346 18 TSTISTAMSAIKEKFSRPPNVLVN 41 (87)
Q Consensus 18 ~~~~~~~~~~~~~~~g~~~d~lv~ 41 (87)
++..+++++++.+..| ++|+-|.
T Consensus 9 ~~~r~~Vf~eVi~~~G-PpDaTVv 31 (146)
T PF08952_consen 9 EEKRESVFEEVISSQG-PPDATVV 31 (146)
T ss_dssp -----------S------TT-EEE
T ss_pred HHHHHHHHHHHHHhcC-CCCceEE
Confidence 4567788888888889 9997554
No 411
>PF12359 DUF3645: Protein of unknown function (DUF3645) ; InterPro: IPR022105 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. There is a conserved HPD sequence motif.
Probab=24.43 E-value=52 Score=13.33 Aligned_cols=11 Identities=36% Similarity=0.770 Sum_probs=7.6
Q ss_pred HHcCCCCcEEEe
Q psy346 30 EKFSRPPNVLVN 41 (87)
Q Consensus 30 ~~~g~~~d~lv~ 41 (87)
.+|+ .+|++|.
T Consensus 22 sEf~-hPDv~I~ 32 (34)
T PF12359_consen 22 SEFS-HPDVVIV 32 (34)
T ss_pred cccc-CCCEEEE
Confidence 4577 8888763
No 412
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=24.02 E-value=1.8e+02 Score=17.70 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.++++.+.+. . ++++++.+... +.+..++.++..++++.
T Consensus 22 D~~~~~~li~~l~~~-~-Gv~gi~v~Gst---GE~~~Ls~eEr~~~~~~ 65 (293)
T PRK04147 22 DEQGLRRLVRFNIEK-Q-GIDGLYVGGST---GEAFLLSTEEKKQVLEI 65 (293)
T ss_pred CHHHHHHHHHHHHhc-C-CCCEEEECCCc---cccccCCHHHHHHHHHH
Confidence 567888888888762 2 58888755333 33446666776666543
No 413
>PRK11430 putative CoA-transferase; Provisional
Probab=23.93 E-value=2.1e+02 Score=18.39 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=20.2
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
.-..+.+|+.+++..+.+.+-++ .-|++|.|-
T Consensus 70 gKrsv~lDLk~~~Gr~~~~~L~~-----~ADVvien~ 101 (381)
T PRK11430 70 GKESVVLDLKNDHDKSIFINMLK-----QADVLAENF 101 (381)
T ss_pred CCeEEEecCCCHHHHHHHHHHHh-----cCCEEEeCC
Confidence 34567789988877554444432 567777764
No 414
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=23.84 E-value=1.9e+02 Score=18.03 Aligned_cols=18 Identities=22% Similarity=0.405 Sum_probs=13.8
Q ss_pred HHHcCCCCcEEEecccccC
Q psy346 29 KEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 29 ~~~~g~~~d~lv~~ag~~~ 47 (87)
.+.+. ..|++|++||...
T Consensus 73 ~~~l~-~aDiVI~tAG~~~ 90 (325)
T cd01336 73 EEAFK-DVDVAILVGAMPR 90 (325)
T ss_pred HHHhC-CCCEEEEeCCcCC
Confidence 34455 7999999999854
No 415
>cd04131 Rnd Rnd subfamily. The Rnd subfamily contains Rnd1/Rho6, Rnd2/Rho7, and Rnd3/RhoE/Rho8. These novel Rho family proteins have substantial structural differences compared to other Rho members, including N- and C-terminal extensions relative to other Rhos. Rnd3/RhoE is farnesylated at the C-terminal prenylation site, unlike most other Rho proteins that are geranylgeranylated. In addition, Rnd members are unable to hydrolyze GTP and are resistant to GAP activity. They are believed to exist only in the GTP-bound conformation, and are antagonists of RhoA activity. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins. Due to the presence of truncated sequences in this CD, the lipid modification site is not available for annotation.
Probab=23.78 E-value=1.4e+02 Score=16.44 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=16.8
Q ss_pred CCceeeeeccCCChHHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSA 27 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~ 27 (87)
+..+..+..|++++++...+...
T Consensus 72 ~a~~~ilvfdit~~~Sf~~~~~~ 94 (178)
T cd04131 72 DSDAVLICFDISRPETLDSVLKK 94 (178)
T ss_pred CCCEEEEEEECCChhhHHHHHHH
Confidence 45667788899999887775443
No 416
>PF09876 DUF2103: Predicted metal-binding protein (DUF2103); InterPro: IPR018664 This family of various putative metal binding prokaryotic proteins has no known function.
Probab=23.35 E-value=1.2e+02 Score=15.65 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=17.4
Q ss_pred eeeeccCCChHHHHHHHHHHHHH
Q psy346 9 LSLPMDVSNTSTISTAMSAIKEK 31 (87)
Q Consensus 9 ~~~~~D~~~~~~~~~~~~~~~~~ 31 (87)
.++.+|.++.+..+.+.+.+.+.
T Consensus 80 vfVVT~~~~~e~~~~i~~~Ln~~ 102 (103)
T PF09876_consen 80 VFVVTTLSDRELGERIIEELNEA 102 (103)
T ss_pred EEEEeeCCcHHHHHHHHHHHHhh
Confidence 35678999988888888877543
No 417
>KOG3798|consensus
Probab=23.23 E-value=2e+02 Score=17.91 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=32.1
Q ss_pred eeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCc---ccccCCHHHHHH
Q psy346 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN---WFLKLTEKDFQQ 61 (87)
Q Consensus 8 v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~---~~~~~~~~~~~~ 61 (87)
..++..|.. -+...+.++.+++| +.|..-...|...+. ....+++++.-+
T Consensus 232 rfffaGDTG---yc~~~F~~IgerfG-pfdLAaiPiGaYePrWfmK~~HInPeEav~ 284 (343)
T KOG3798|consen 232 RFFFAGDTG---YCDGEFKKIGERFG-PFDLAAIPIGAYEPRWFMKSQHINPEEAVE 284 (343)
T ss_pred eEEecCCCC---cccHHHHHHHHhcC-CcceeeccccccCchhhcccccCCHHHHHH
Confidence 445555543 35557899999999 999876666765543 334566655433
No 418
>TIGR00519 asnASE_I L-asparaginases, type I. Two related families of asparaginase are designated type I and type II according to the terminology in E. coli, which has both: L-asparaginase I is a low-affinity enzyme found in the cytoplasm, while L-asparaginase II is a high-affinity secreted enzyme synthesized with a cleavable signal sequence. This model describes L-asparaginases related to type I of E. coli. Archaeal putative asparaginases are of this type but contain an extra ~ 80 residues in a conserved N-terminal region. These archaeal homologs are included in this model.
Probab=22.96 E-value=1.8e+02 Score=18.33 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=22.9
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccc
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGI 45 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~ 45 (87)
.++++..+.+.+.+.+. ..|++|...|.
T Consensus 60 tp~~w~~la~~I~~~~~-~~dG~VVtHGT 87 (336)
T TIGR00519 60 KPEYWVEIAEAVKKEYD-DYDGFVITHGT 87 (336)
T ss_pred CHHHHHHHHHHHHHHHh-cCCeEEEccCC
Confidence 35789999999988887 79998877775
No 419
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=22.96 E-value=2.4e+02 Score=18.80 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=26.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHH--cCCCCcEEEecccccCCcccccCCHHHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEK--FSRPPNVLVNCAGITRDNWFLKLTEKDF 59 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~--~g~~~d~lv~~ag~~~~~~~~~~~~~~~ 59 (87)
.++..+++-+--..+..++++.+... .+ .+|++|.+-|...--.++..++|.+
T Consensus 163 ~~viv~pt~VQG~~A~~eIv~aI~~an~~~-~~DvlIVaRGGGSiEDLW~FNdE~v 217 (440)
T COG1570 163 VEVIVYPTLVQGEGAAEEIVEAIERANQRG-DVDVLIVARGGGSIEDLWAFNDEIV 217 (440)
T ss_pred CeEEEEeccccCCCcHHHHHHHHHHhhccC-CCCEEEEecCcchHHHHhccChHHH
Confidence 45555555443333344444443332 34 6899988776643333444444443
No 420
>COG4981 Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
Probab=22.94 E-value=1.1e+02 Score=21.16 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=20.3
Q ss_pred HHHHHHHHHHcCCCCcEEEecccccC
Q psy346 22 STAMSAIKEKFSRPPNVLVNCAGITR 47 (87)
Q Consensus 22 ~~~~~~~~~~~g~~~d~lv~~ag~~~ 47 (87)
++++.++++..- ++|+++..||+..
T Consensus 111 krLv~kara~G~-~I~gvvIsAGIP~ 135 (717)
T COG4981 111 KRLVQKARASGA-PIDGVVISAGIPS 135 (717)
T ss_pred HHHHHHHHhcCC-CcceEEEecCCCc
Confidence 568888888755 8999999999853
No 421
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=22.64 E-value=1.9e+02 Score=17.61 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHh
Q psy346 17 NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDV 65 (87)
Q Consensus 17 ~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 65 (87)
|.+.+.+.++...+. | .+++++.+-.. +....++.++..++++.
T Consensus 19 D~~~~~~~i~~~i~~-G-~v~gi~~~Gst---GE~~~Lt~eEr~~~~~~ 62 (290)
T TIGR00683 19 NEKGLRQIIRHNIDK-M-KVDGLYVGGST---GENFMLSTEEKKEIFRI 62 (290)
T ss_pred CHHHHHHHHHHHHhC-C-CcCEEEECCcc---cccccCCHHHHHHHHHH
Confidence 667888888887663 2 38887765333 23345566776666553
No 422
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=22.62 E-value=1.6e+02 Score=16.69 Aligned_cols=44 Identities=7% Similarity=-0.078 Sum_probs=26.7
Q ss_pred CCcEEEecccccCCcccccCC-HHHHHHH---HHhhhHHHHHHHHHHH
Q psy346 35 PPNVLVNCAGITRDNWFLKLT-EKDFQQV---FDVNLKLVDRRGGTAG 78 (87)
Q Consensus 35 ~~d~lv~~ag~~~~~~~~~~~-~~~~~~~---~~~n~~~~~~~~~~~~ 78 (87)
..|++|..-+.....++.+.+ ++++.+. .+.|+.+.+.+|-.+.
T Consensus 62 ~yDGlIITGApve~~~fe~v~Yw~El~~i~dwa~~~v~stl~iCWgaq 109 (175)
T cd03131 62 KFDGLIVTGAPVEHLPFEQVDYWEELTEILDWAKTHVTSTLFSCWAAM 109 (175)
T ss_pred CCCEEEEeCCCcccCCccccchHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 799998765554445565544 2333333 3567777777775544
No 423
>PRK07157 acetate kinase; Provisional
Probab=22.43 E-value=1.9e+02 Score=18.98 Aligned_cols=18 Identities=17% Similarity=0.377 Sum_probs=13.8
Q ss_pred cCCCCcEEEecccccCCc
Q psy346 32 FSRPPNVLVNCAGITRDN 49 (87)
Q Consensus 32 ~g~~~d~lv~~ag~~~~~ 49 (87)
+++++|.+|+.+|+....
T Consensus 317 L~G~vDaiVFTgGIGen~ 334 (400)
T PRK07157 317 IGKKIDAIVFTAGVGENS 334 (400)
T ss_pred hCCCCCEEEECCccccCc
Confidence 452599999999997654
No 424
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=22.43 E-value=1e+02 Score=18.77 Aligned_cols=11 Identities=27% Similarity=0.519 Sum_probs=8.5
Q ss_pred CCcEEEecccc
Q psy346 35 PPNVLVNCAGI 45 (87)
Q Consensus 35 ~~d~lv~~ag~ 45 (87)
..|++|||..+
T Consensus 199 ~~DilINaTp~ 209 (289)
T PRK12548 199 SSDILVNATLV 209 (289)
T ss_pred cCCEEEEeCCC
Confidence 56899998754
No 425
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=22.41 E-value=1.6e+02 Score=18.77 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=26.5
Q ss_pred ceeeeeccCC---ChHHHHHHHHHHHHHcCCCCcEEEecccccCCccccc
Q psy346 7 THLSLPMDVS---NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK 53 (87)
Q Consensus 7 ~v~~~~~D~~---~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~ 53 (87)
++..+.+|-. +.+++++.+++..++.. .+=.+|.++|....+.+.+
T Consensus 164 g~~~I~~~~~~~md~~~L~~~l~~~~~~g~-~p~~vvat~Gtt~~Ga~D~ 212 (373)
T PF00282_consen 164 GVRKIPTDEDGRMDIEALEKALEKDIANGK-TPFAVVATAGTTNTGAIDP 212 (373)
T ss_dssp EEEEE-BBTTSSB-HHHHHHHHHHHHHTTE-EEEEEEEEBS-TTTSBB-S
T ss_pred EEEEecCCcchhhhHHHhhhhhcccccccc-cceeeeccCCCcccccccC
Confidence 3666777752 55778887777766522 3446777888776555433
No 426
>PF00871 Acetate_kinase: Acetokinase family; InterPro: IPR000890 Acetate kinase, which is predominantly found in micro-organisms, facilitates the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation [, ]. The enzyme is important in the process of glycolysis, enzyme levels being increased in the presence of excess glucose. The growth of a bacterial mutant lacking acetate kinase has been shown to be inhibited by glucose, suggesting that the enzyme is involved in excretion of excess carbohydrate []. A related enzyme, butyrate kinase, facilitates the formation of butyryl-CoA by phosphorylating butyrate in the presence of ATP to form butyryl phosphate [].; GO: 0016301 kinase activity, 0016774 phosphotransferase activity, carboxyl group as acceptor, 0008152 metabolic process, 0016310 phosphorylation, 0005622 intracellular; PDB: 3P4I_B 3R9P_B 2IIR_J 1SAZ_A 1X9J_D 4DQ8_B 1TUU_A 1TUY_B 1G99_A 1X3N_A ....
Probab=22.35 E-value=1.2e+02 Score=19.66 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=13.9
Q ss_pred HHHHc-CCCCcEEEecccccCC
Q psy346 28 IKEKF-SRPPNVLVNCAGITRD 48 (87)
Q Consensus 28 ~~~~~-g~~~d~lv~~ag~~~~ 48 (87)
....+ | ++|.+|+..|+...
T Consensus 313 ~~a~l~G-~vDaivfTGGige~ 333 (388)
T PF00871_consen 313 YAAVLEG-GVDAIVFTGGIGEN 333 (388)
T ss_dssp HHHHHTS-S-SEEEEEHHHHHH
T ss_pred HHHhhcc-CCCEEEEccccccc
Confidence 33345 7 99999999998654
No 427
>KOG1494|consensus
Probab=22.32 E-value=2.2e+02 Score=18.06 Aligned_cols=45 Identities=20% Similarity=0.407 Sum_probs=26.7
Q ss_pred HHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHHHhhhHHHHHHHHHHH
Q psy346 27 AIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLKLVDRRGGTAG 78 (87)
Q Consensus 27 ~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 78 (87)
++.+.+. .-|++|..||+.... .++. +..|++|..-.-.++-+..
T Consensus 89 ~L~~al~-~advVvIPAGVPRKP---GMTR---DDLFn~NAgIv~~l~~aia 133 (345)
T KOG1494|consen 89 GLENALK-GADVVVIPAGVPRKP---GMTR---DDLFNINAGIVKTLAAAIA 133 (345)
T ss_pred HHHHHhc-CCCEEEecCCCCCCC---CCcH---HHhhhcchHHHHHHHHHHH
Confidence 3444455 789999999996543 2332 3456777655554544443
No 428
>COG4778 PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=22.25 E-value=1.3e+02 Score=17.64 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=21.1
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEEEe
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVN 41 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~ 41 (87)
-++|.++.+.+..++.+.+++.- .+-+++|
T Consensus 181 asLDa~Nr~vVveli~e~Ka~Ga-AlvGIFH 210 (235)
T COG4778 181 ASLDATNRAVVVELIREAKARGA-ALVGIFH 210 (235)
T ss_pred ccccccchHHHHHHHHHHHhcCc-eEEEeec
Confidence 36788899999999999887643 4433433
No 429
>COG1325 Predicted exosome subunit [Translation, ribosomal structure and biogenesis]
Probab=22.25 E-value=1.6e+02 Score=16.42 Aligned_cols=31 Identities=6% Similarity=0.097 Sum_probs=23.5
Q ss_pred CCCCceeeeeccCCChHHHHHHHHHHHHHcC
Q psy346 3 TGSSTHLSLPMDVSNTSTISTAMSAIKEKFS 33 (87)
Q Consensus 3 ~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g 33 (87)
++|-++..+..-+.+.....++++.+.+.++
T Consensus 49 hyGNpI~il~~~l~~~~~~~~flk~i~e~l~ 79 (149)
T COG1325 49 HYGNPITILEVRLERSREARKFLKKLRELLG 79 (149)
T ss_pred ccCCeEEEEEEEecCcHHHHHHHHHHHHhcC
Confidence 3566777788888887788888888877765
No 430
>PLN02590 probable tyrosine decarboxylase
Probab=22.14 E-value=2.7e+02 Score=19.02 Aligned_cols=45 Identities=18% Similarity=0.029 Sum_probs=28.0
Q ss_pred ceeeeeccC-----CChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccc
Q psy346 7 THLSLPMDV-----SNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL 52 (87)
Q Consensus 7 ~v~~~~~D~-----~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~ 52 (87)
.+..+.+|- -+.+++++.+++-.+... .+=.+|-++|....+.+.
T Consensus 255 ~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~-~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 255 NIRLLKTDSSTNYGMPPESLEEAISHDLAKGF-IPFFICATVGTTSSAAVD 304 (539)
T ss_pred cEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCC-CcEEEEEEeCCCCCcccC
Confidence 466777773 266777777776655433 455677778876554443
No 431
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=22.02 E-value=97 Score=18.84 Aligned_cols=23 Identities=9% Similarity=0.367 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 19 STISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
..++..+..++++++ +|.+|.|+
T Consensus 13 ~~v~~~Lp~L~~~~~--~DfVIaNg 35 (253)
T PF13277_consen 13 RAVKEHLPELKEEYG--IDFVIANG 35 (253)
T ss_dssp HHHHHHHHHHGG--G---SEEEEE-
T ss_pred HHHHHHHHHHHhhcC--CCEEEECC
Confidence 467777888888775 99999876
No 432
>KOG2743|consensus
Probab=21.78 E-value=1.5e+02 Score=18.91 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=24.4
Q ss_pred eeccCCChHHHHHHHHHHHHHcCCCCcEE-EecccccCCccccc
Q psy346 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVL-VNCAGITRDNWFLK 53 (87)
Q Consensus 11 ~~~D~~~~~~~~~~~~~~~~~~g~~~d~l-v~~ag~~~~~~~~~ 53 (87)
..|-+.+ ...++++++.++-| ++|.+ +-..|...|.|+..
T Consensus 124 lCCtVk~--~gvraie~lvqkkG-kfD~IllETTGlAnPaPia~ 164 (391)
T KOG2743|consen 124 LCCTVKD--NGVRAIENLVQKKG-KFDHILLETTGLANPAPIAS 164 (391)
T ss_pred EEEEecc--hHHHHHHHHHhcCC-CcceEEEeccCCCCcHHHHH
Confidence 3444443 34556666666667 99865 55667777666543
No 433
>PLN02263 serine decarboxylase
Probab=21.66 E-value=1.9e+02 Score=19.38 Aligned_cols=46 Identities=11% Similarity=0.023 Sum_probs=25.1
Q ss_pred ceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCccccc
Q psy346 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK 53 (87)
Q Consensus 7 ~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~ 53 (87)
++..+++|-.-.-++..+.+.+.+... .+=+++.++|....+.+.+
T Consensus 201 ~~~~Vp~d~~g~mD~~aL~~aI~~d~~-~P~iVvataGTT~~GAiDp 246 (470)
T PLN02263 201 ECVKVDTLVSGEIDCADFKAKLLANKD-KPAIINVNIGTTVKGAVDD 246 (470)
T ss_pred cceEeccCCCCcCcHHHHHHHHHhCCC-CcEEEEEEecCCCCcCCCC
Confidence 455566664433344445455544333 4556777888876554433
No 434
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=21.29 E-value=1.6e+02 Score=15.98 Aligned_cols=55 Identities=7% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHHHHHHHH
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~~~~~~~ 63 (87)
|.++.....--.|++.+.+.++++.++ . +.|++|.+-|..... .+...+-+.+..
T Consensus 33 G~~v~~~~~v~Dd~~~i~~~l~~~~~~-~-~~DlVittGG~s~g~--~D~t~~al~~~~ 87 (152)
T cd00886 33 GHEVVAYEIVPDDKDEIREALIEWADE-D-GVDLILTTGGTGLAP--RDVTPEATRPLL 87 (152)
T ss_pred CCeeeeEEEcCCCHHHHHHHHHHHHhc-C-CCCEEEECCCcCCCC--CcCcHHHHHHHh
Confidence 444444444334666777777766542 2 578888886654322 255555555543
No 435
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=21.28 E-value=2.5e+02 Score=18.29 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=27.7
Q ss_pred CceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCCcccccCCHH
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEK 57 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~~~~~~~~~ 57 (87)
.++..+++-+--..+...+++.+...-...+|++|..-|......+...+.+
T Consensus 163 ~~~~~~~~~vQG~~A~~~i~~al~~~~~~~~Dviii~RGGGS~eDL~~Fn~e 214 (438)
T PRK00286 163 VEVIIYPTLVQGEGAAASIVAAIERANARGEDVLIVARGGGSLEDLWAFNDE 214 (438)
T ss_pred CeEEEecCcCcCccHHHHHHHHHHHhcCCCCCEEEEecCCCCHHHhhccCcH
Confidence 4556666666444455555555544322137999887776443333333333
No 436
>PF07875 Coat_F: Coat F domain; InterPro: IPR012851 The Coat F proteins contribute to the Bacillales spore coat. They occur multiple times in the genomes in which they are found. Bacillus subtilis endospore protein coats protect them and may play a role in their germination []. Spore coat protein F, on the outer surface of the endospore, is one of a suite of proteins that could be used to differentiate between members of the Bacillus genus [].
Probab=21.28 E-value=1e+02 Score=13.91 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=26.6
Q ss_pred cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC
Q psy346 53 KLTEKDFQQVFDVNLKLVDRRGGTAGKVCLDFGHT 87 (87)
Q Consensus 53 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 87 (87)
+..-.++++.+.-.+.-....-..+...|.++|+.
T Consensus 26 E~~np~lR~~l~~~~~~~~~~~~~l~~~m~~kGwY 60 (64)
T PF07875_consen 26 ECANPELRQILQQILNECQQMQYELFNYMNQKGWY 60 (64)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 44445678888888888888888888889888863
No 437
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.23 E-value=1.5e+02 Score=19.88 Aligned_cols=28 Identities=7% Similarity=0.224 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecccccCCc
Q psy346 20 TISTAMSAIKEKFSRPPNVLVNCAGITRDN 49 (87)
Q Consensus 20 ~~~~~~~~~~~~~g~~~d~lv~~ag~~~~~ 49 (87)
+.....+.+.+.+. .|++|++|++....
T Consensus 321 ta~eM~~av~~~~~--~Di~I~aAAVaDyr 348 (475)
T PRK13982 321 SARQMLAAVEAALP--ADIAIFAAAVADWR 348 (475)
T ss_pred CHHHHHHHHHhhCC--CCEEEEecccccee
Confidence 44555666655554 69999999886543
No 438
>PF11688 DUF3285: Protein of unknown function (DUF3285); InterPro: IPR021702 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=21.17 E-value=93 Score=13.37 Aligned_cols=14 Identities=14% Similarity=-0.131 Sum_probs=9.0
Q ss_pred HHHHHHHHHHhcCC
Q psy346 73 RGGTAGKVCLDFGH 86 (87)
Q Consensus 73 ~~~~~~~~~~~~~~ 86 (87)
..|.+.+.|.+.|.
T Consensus 7 yvKLAMRNMVRKg~ 20 (45)
T PF11688_consen 7 YVKLAMRNMVRKGG 20 (45)
T ss_pred HHHHHHHHHHHccC
Confidence 45666777777664
No 439
>KOG1372|consensus
Probab=21.15 E-value=1.2e+02 Score=18.81 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=27.1
Q ss_pred CCceeeeeccCCChHHHHHHHHHHHHHcCCCCcEEEecccccCC
Q psy346 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD 48 (87)
Q Consensus 5 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~ag~~~~ 48 (87)
++.....-.|++|...+.++++.+ .++-+.|-|+..+.
T Consensus 82 ~~~mkLHYgDmTDss~L~k~I~~i------kPtEiYnLaAQSHV 119 (376)
T KOG1372|consen 82 GASMKLHYGDMTDSSCLIKLISTI------KPTEVYNLAAQSHV 119 (376)
T ss_pred cceeEEeeccccchHHHHHHHhcc------Cchhhhhhhhhcce
Confidence 345566678999999999998887 56666666665443
No 440
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=20.99 E-value=1.3e+02 Score=15.14 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=14.8
Q ss_pred HHHHHHHHcCC-CCcEEEecccc
Q psy346 24 AMSAIKEKFSR-PPNVLVNCAGI 45 (87)
Q Consensus 24 ~~~~~~~~~g~-~~d~lv~~ag~ 45 (87)
+.+++++..++ ++|+++.++|.
T Consensus 46 ~~~~i~~~~~~~~~d~vid~~g~ 68 (130)
T PF00107_consen 46 FVEQIRELTGGRGVDVVIDCVGS 68 (130)
T ss_dssp HHHHHHHHTTTSSEEEEEESSSS
T ss_pred cccccccccccccceEEEEecCc
Confidence 44555555552 59999999883
No 441
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=20.85 E-value=1.6e+02 Score=18.42 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=21.8
Q ss_pred CceeeeeccCCChHHHHHHHHHHH-HHcCCCCcE
Q psy346 6 STHLSLPMDVSNTSTISTAMSAIK-EKFSRPPNV 38 (87)
Q Consensus 6 ~~v~~~~~D~~~~~~~~~~~~~~~-~~~g~~~d~ 38 (87)
..++++.+|++. +.++...+.+. +.++ .+.+
T Consensus 103 ~~~~Y~plDIS~-~~L~~a~~~L~~~~~p-~l~v 134 (319)
T TIGR03439 103 KSVDYYALDVSR-SELQRTLAELPLGNFS-HVRC 134 (319)
T ss_pred CCceEEEEECCH-HHHHHHHHhhhhccCC-CeEE
Confidence 457899999985 46777788877 5555 4443
No 442
>COG1379 PHP family phosphoesterase with a Zn ribbon [General function prediction only]
Probab=20.76 E-value=68 Score=20.46 Aligned_cols=24 Identities=13% Similarity=0.328 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEec
Q psy346 19 STISTAMSAIKEKFSRPPNVLVNC 42 (87)
Q Consensus 19 ~~~~~~~~~~~~~~g~~~d~lv~~ 42 (87)
..++..++.+.++||+.+++++..
T Consensus 321 K~V~~~we~lv~~FGtEi~vLi~a 344 (403)
T COG1379 321 KAVKRTWERLVRAFGTEIDVLIDA 344 (403)
T ss_pred hhHHHHHHHHHHHhcchhhhHhcC
Confidence 568899999999998678887643
No 443
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=20.43 E-value=1e+02 Score=17.00 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=12.4
Q ss_pred HHHHHHHHHHcCCC-CcEEEecccc
Q psy346 22 STAMSAIKEKFSRP-PNVLVNCAGI 45 (87)
Q Consensus 22 ~~~~~~~~~~~g~~-~d~lv~~ag~ 45 (87)
-.+++.+-+..+ . .+++||.++.
T Consensus 54 g~Lid~Ihea~~-~~~~IvINpga~ 77 (146)
T COG0757 54 GELIDWIHEARG-KAGDIVINPGAY 77 (146)
T ss_pred HHHHHHHHHhhc-cCCeEEEcCccc
Confidence 456666666665 4 4444444443
No 444
>PF05347 Complex1_LYR: Complex 1 protein (LYR family); InterPro: IPR008011 This family of short proteins includes proteins from the NADH-ubiquinone oxidoreductase complex I. The family includes the B14 subunit from bovine NADH-ubiquinone oxidoreductase B14 subunit Q02366 from SWISSPROT, and the B22 subunit from the human enzyme Q9Y6M9 from SWISSPROT. The family has been named LYR after a highly conserved tripeptide motif close to the N terminus of these proteins. Members of this family also found in yeast which do contain this complex. In these organisms they are believed to be be required for iron-sulphur custer biogenesis.
Probab=20.38 E-value=1e+02 Score=13.42 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=12.4
Q ss_pred cCCChHHHHHHHHHHHHH
Q psy346 14 DVSNTSTISTAMSAIKEK 31 (87)
Q Consensus 14 D~~~~~~~~~~~~~~~~~ 31 (87)
+++|++.+..++....+.
T Consensus 39 ~~~d~~~I~~~l~~g~~~ 56 (59)
T PF05347_consen 39 NETDPEKIEELLKKGEEE 56 (59)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 467777777777776554
No 445
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; PDB: 3M49_B 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 3HYL_A 3RIM_A ....
Probab=20.25 E-value=2.4e+02 Score=17.82 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=23.4
Q ss_pred ccCCChHHHHHHHHHHHHHcCCCCcEEEecc
Q psy346 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43 (87)
Q Consensus 13 ~D~~~~~~~~~~~~~~~~~~g~~~d~lv~~a 43 (87)
+|=.|.+++.++++++...-+ ++.+++...
T Consensus 213 ~dGhd~~~i~~A~~~a~~~~~-kP~~Ii~~T 242 (332)
T PF00456_consen 213 CDGHDVEAIYAAIEEAKASKG-KPTVIIART 242 (332)
T ss_dssp EETTBHHHHHHHHHHHHHSTS-S-EEEEEEE
T ss_pred ccCcHHHHHHHHHHHHHhcCC-CCceeecce
Confidence 588899999999999987656 788777664
Done!