RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy346
(87 letters)
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 83.4 bits (207), Expect = 2e-21
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
H + DVS + ++ FSRPP+V+V+CAGIT+D + L ++E D+ +V VN
Sbjct: 64 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVN 123
Query: 67 LK 68
LK
Sbjct: 124 LK 125
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 72.1 bits (178), Expect = 3e-17
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ DVS + + F R ++LVN AGI F +LT + +++ F++N+
Sbjct: 57 LTVKCDVSQPGDVEAFGKQVISTFGRC-DILVNNAGIYPLIPFDELTFEQWKKTFEINVD 115
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 70.6 bits (174), Expect = 9e-17
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ MDV++ +++ + R + +V+ AGITRDN+ K+ +D++ V VNL
Sbjct: 54 VVMDVADPASVERGFAEALAHLGRL-DGVVHYAGITRDNFHWKMPLEDWELVLRVNLT 110
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 70.6 bits (174), Expect = 9e-17
Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ D+S+ ++ + I+ ++LVN A I + + ++++ DVNL
Sbjct: 55 RAIAADISDPGSVKALFAEIQALTGGI-DILVNNASIVPFVAWDDVDLDHWRKIIDVNLT 113
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 70.3 bits (173), Expect = 1e-16
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+++ DVS+ + + E+F R + + + AG+ L + +++V VNL
Sbjct: 54 AIAVVADVSDPKAVEAVFAEALEEFGRL-HGVAHFAGVAHSALSWNLPLEAWEKVLRVNL 112
Query: 68 K 68
Sbjct: 113 T 113
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 69.9 bits (172), Expect = 2e-16
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+++ +DVS+ + A+ ++ +V+VN AG+ +T + +V+++N+K
Sbjct: 54 VAVKVDVSDRDQVFAAVEQARKTLGGF-DVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 70.3 bits (173), Expect = 2e-16
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+ + + +DVS+ + + A + + F +V+ AGI + +T + +V
Sbjct: 89 GAGNVIGVRLDVSDPGSCADAARTVVDAFGAL-DVVCANAGIFPEARLDTMTPEQLSEVL 147
Query: 64 DVNLK 68
DVN+K
Sbjct: 148 DVNVK 152
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 69.5 bits (171), Expect = 3e-16
Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ +DV+ +++ AM + ++L AG++ + +T++++ FDVN +
Sbjct: 61 FAVEVDVTKRASVDAAMQKAIDALGGF-DLLCANAGVSTMRPAVDITDEEWDFNFDVNAR 119
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 69.5 bits (171), Expect = 3e-16
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
GS + + DVS+ + E+F +V+ AG+ D +T + +F
Sbjct: 58 GSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI-DVVCANAGVFPDAPLATMTPEQLNGIF 116
Query: 64 DVNLK 68
VN+
Sbjct: 117 AVNVN 121
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 69.5 bits (171), Expect = 3e-16
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + +DV++ + +A+ EK +VLVN AGI + L++TE+D +Q++ VN+
Sbjct: 56 VFVGLDVTDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 69.5 bits (171), Expect = 3e-16
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+V + + A +K + +VLVN AGITRD F K+T +D+Q V D NL
Sbjct: 68 SEGNVGDWDSTKQAFDKVKAEVGEI-DVLVNNAGITRDVVFRKMTREDWQAVIDTNLT 124
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 69.1 bits (170), Expect = 4e-16
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV++ T+ + EK R +VLVN A L ++F + V LK
Sbjct: 52 FHGDVADPLTLKKFVEYAMEKLQRI-DVLVNNACRGSKGILSSLLYEEFDYILSVGLK 108
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 69.1 bits (170), Expect = 5e-16
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+DV++ + + F + +VL+N AGITRD F+K+T+ D+ V +L
Sbjct: 80 YAVDVADFESCERCAEKVLADFGKV-DVLINNAGITRDATFMKMTKGDWDAVMRTDLD 136
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 68.7 bits (169), Expect = 5e-16
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ DV N + + + F R ++LVN AGITRD LK++EKD+ V + NLK
Sbjct: 58 VVAKGDVKNPEDVENMVKTAMDAFGRI-DILVNNAGITRDTLMLKMSEKDWDDVLNTNLK 116
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 68.7 bits (169), Expect = 5e-16
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ DV+N ++ + + F + ++LVN AG+T+DN +++ E+++ V + NLK
Sbjct: 59 VRADVANAEDVTNMVKQTVDVFGQV-DILVNNAGVTKDNLLMRMKEEEWDTVINTNLK 115
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 68.7 bits (169), Expect = 5e-16
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
GS L ++ + + E + LVN AGITRD +++ ++D++ V
Sbjct: 50 GSPLVAVLGANLLEAEAATALVHQAAEVLGGL-DTLVNNAGITRDTLLVRMKDEDWEAVL 108
Query: 64 DVNLK 68
+ NL
Sbjct: 109 EANLS 113
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 68.7 bits (169), Expect = 5e-16
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ DVS + + M + + +V+VN AGITRD +++ + + +V D+NL
Sbjct: 54 ITFGGDVSKEADVEAMMKTAIDAWGTI-DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT 112
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 68.7 bits (169), Expect = 5e-16
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +V++ + + + +F +VLVN AGITRDN +++ E+++ V D NLK
Sbjct: 59 IQANVADADEVKAMIKEVVSQFGSL-DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLK 115
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 69.6 bits (171), Expect = 7e-16
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +DV+ + + + E ++LVN AGITRD + EK + V VNL
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLL 321
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 68.8 bits (169), Expect = 7e-16
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DVS IS ++ I + ++LVN AGITRDN FL++ +++ V NL
Sbjct: 96 SGYAGDVSKKEEISEVINKILTEHKNV-DILVNNAGITRDNLFLRMKNDEWEDVLRTNLN 154
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 68.3 bits (168), Expect = 7e-16
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
MDV++ + ++ + + R + LVN AGI R +L+++D+QQ F VN+
Sbjct: 51 EVMDVADAAQVAQVCQRLLAETERL-DALVNAAGILRMGATDQLSKEDWQQTFAVNVG 107
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 68.4 bits (168), Expect = 8e-16
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ D+S T + E+F R + LVN AG+ F+++T++D+ VN+
Sbjct: 71 HTVAGDISKPETADRIVREGIERFGRI-DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVA 129
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 68.3 bits (168), Expect = 9e-16
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ ++V+N +I + AI ++F ++LVN AGITRDN +++ E+++ + + NL
Sbjct: 60 MALNVTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNLT 116
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 68.3 bits (168), Expect = 9e-16
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++V++ + + + + ++F NVLVN AGIT+D +++ + ++ V D NLK
Sbjct: 82 AVLNVNDATAVDALVESTLKEFGAL-NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLK 138
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 68.4 bits (168), Expect = 9e-16
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ DVS S + +A+ E++ R +VLVN AGITRD L++ D+Q V D+NL
Sbjct: 81 FAVKADVSQESEVEALFAAVIERWGRL-DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLG 139
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 68.0 bits (167), Expect = 9e-16
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DV+++ + A +A++E P VLV+ AG++ D + +++TE+ F++V + NL
Sbjct: 56 FGVEVDVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 114
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 68.0 bits (167), Expect = 1e-15
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ D+++T + A I+E P VL+ AG+T+D ++++E+DF V + NL
Sbjct: 62 LAVKCDITDTEQVEQAYKEIEETHG-PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLT 120
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 67.9 bits (167), Expect = 1e-15
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ M++ + +I+ A I ++LVN AGITRD FL+++ D+++V VNL
Sbjct: 62 VEMNLLSEESINKAFEEIYNLVDGI-DILVNNAGITRDKLFLRMSLLDWEEVLKVNLT 118
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 67.5 bits (166), Expect = 1e-15
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +++S+ +I + IK + ++LVN AGITRDN ++++E ++Q V + NL
Sbjct: 59 LVLNISDIESIQNFFAEIKAENLAI-DILVNNAGITRDNLMMRMSEDEWQSVINTNLS 115
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 67.3 bits (165), Expect = 2e-15
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV++T + A++A E+F P +LVN AG L + + V D NL
Sbjct: 76 DGSSCDVTSTDEVHAAVAAAVERFG-PIGILVNSAGRNGGGETADLDDALWADVLDTNLT 134
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 67.3 bits (165), Expect = 2e-15
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV + I ++A+ E++ +VLVN AG +L ++ + V + NL
Sbjct: 76 RTCDVRSVPEIEALVAAVVERYGPV-DVLVNNAGRPGGGATAELADELWLDVVETNLT 132
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 67.1 bits (165), Expect = 3e-15
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+V + I I E F R +V VN A ++L E + ++N K
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRL-DVFVNNAASGVLRPVMELEETHWDWTMNINAK 115
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 66.8 bits (164), Expect = 3e-15
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G ++ DV++T + ++ EK R +VLVN AG+ + +T++++ +V
Sbjct: 71 GLGRVEAVVCDVTSTEAVDALITQTVEKAGRL-DVLVNNAGLGGQTPVVDMTDEEWDRVL 129
Query: 64 DVNLK 68
+V L
Sbjct: 130 NVTLT 134
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 66.8 bits (164), Expect = 3e-15
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++S+ +I + + ++LVN AGITRD F+++ ++D+ V VNL
Sbjct: 78 FSANLSDRKSIKQLAEVAEREMEGI-DILVNNAGITRDGLFVRMQDQDWDDVLAVNLT 134
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 66.8 bits (164), Expect = 3e-15
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ MDV+ +I A++A E ++LVN A + +++T + ++++F +N+
Sbjct: 57 YAVQMDVTRQDSIDAAIAATVEHAGGL-DILVNNAALFDLAPIVEITRESYEKLFAINVA 115
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 66.4 bits (163), Expect = 5e-15
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D S M + F ++L+N G R L T +DF NL+
Sbjct: 68 SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE 125
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 66.0 bits (162), Expect = 6e-15
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L++ MDV NT I + I EKF R ++L+N A L+ + V ++ L
Sbjct: 58 LTVQMDVRNTDDIQKMIEQIDEKFGRI-DILINNAAGNFICPAEDLSVNGWNSVINIVLN 116
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 66.1 bits (162), Expect = 8e-15
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + ++ N ++ + + + F + N LVN G + ++ K + V + NL
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTFGKI-NFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 64.9 bits (159), Expect = 2e-14
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ +D++ + E F +VLVN AGI+ + + F VNL+
Sbjct: 73 HTVAIDLAEPDAPAELARRAAEAFGGL-DVLVNNAGISHPQPVVDTDPQLFDATIAVNLR 131
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 64.5 bits (158), Expect = 2e-14
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+ DV + + A + ++LVN AG R + F + T++ + + +
Sbjct: 60 RLFASVCDVLDALQVRAFAEACERTLGCA-SILVNNAGQGRVSTFAETTDEAWSEELQLK 118
Query: 67 LK 68
Sbjct: 119 FF 120
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 64.5 bits (158), Expect = 3e-14
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 13/80 (16%)
Query: 8 HLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
L LP D+ + A+ R +++VN AG+ + T+ D+ VN+
Sbjct: 68 DLHLPGDLREAAYADGLPGAVAAGLGRL-DIVVNNAGVISRGRITETTDADWSLSLGVNV 126
Query: 68 K------------LVDRRGG 75
+ + GG
Sbjct: 127 EAPFRICRAAIPLMAAAGGG 146
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 64.1 bits (157), Expect = 3e-14
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++P D+S+ + A+ E +R ++LVN AG + +++V +N+
Sbjct: 80 QAIPADLSSEAGARRLAQALGELSARL-DILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 64.0 bits (157), Expect = 3e-14
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ D+S+ S M+ + F N+LVN AGI T +D+ + +N +
Sbjct: 61 EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFE 120
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 63.7 bits (156), Expect = 4e-14
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ L +V++ + A ++F + VLVN AG + DF+ F +NL
Sbjct: 64 IGLECNVTDEQHREAVIKAALDQFGKI-TVLVNNAGGGGPK-PFDMPMSDFEWAFKLNLF 121
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 64.1 bits (157), Expect = 4e-14
Identities = 14/60 (23%), Positives = 23/60 (38%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D+ + + M + F N+LVN AG+ TEKD+ + N +
Sbjct: 73 EGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFE 132
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 63.7 bits (156), Expect = 5e-14
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L + DV+ + + + + ++ V AGI L + ++FQ++ D N+
Sbjct: 84 LPIRCDVTQPDQVRGMLDQMTGELGGI-DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 63.8 bits (156), Expect = 5e-14
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV++ I ++ I+ + ++LVN AGI R +++T F+QV D++L
Sbjct: 86 HGYVCDVTDEDGIQAMVAQIESEVGII-DILVNNAGIIRRVPMIEMTAAQFRQVIDIDLN 144
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 62.9 bits (154), Expect = 7e-14
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ DV++ I A S + + ++L+N AGI ++L +++Q+V D NL
Sbjct: 61 HGVAFDVTDELAIEAAFSKLDAEGIHV-DILINNAGIQYRKPMVELELENWQKVIDTNLT 119
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 63.0 bits (154), Expect = 8e-14
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG--ITRDNWFLKLTEKDFQQVFDVN 66
+ DV+ + + F + + L+N AG + + E ++ ++ N
Sbjct: 60 QFVQADVTKKEDLHKIVEEAMSHFGKI-DFLINNAGPYVFERKKLVDYEEDEWNEMIQGN 118
Query: 67 LK 68
L
Sbjct: 119 LT 120
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 62.9 bits (154), Expect = 8e-14
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI---TRDNWFLKLTEKDFQQVF 63
T +S+ +DVS+ + +F + LVN A I + ++ L + + +++
Sbjct: 59 TAISVAVDVSDPESAKAMADRTLAEFGGI-DYLVNNAAIFGGMKLDFLLTIDPEYYKKFM 117
Query: 64 DVNLK 68
VNL
Sbjct: 118 SVNLD 122
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 63.0 bits (154), Expect = 9e-14
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DVS+ + + + +E F +VLVN AGI + + F +V VNLK
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGV-DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK 138
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 62.6 bits (153), Expect = 1e-13
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ D+S+ + + + I E++ + LVN AG+ R LTE+DF + NLK
Sbjct: 61 DTITADISDMADVRRLTTHIVERYGHI-DCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 63.0 bits (154), Expect = 1e-13
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DVSNT ++ + I + L+ AG++ +LT +DF V+DVN+
Sbjct: 72 DVSNTDIVTKTIQQIDADLGPI-SGLIANAGVSVVKPATELTHEDFAFVYDVNVF 125
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 62.6 bits (153), Expect = 1e-13
Identities = 6/56 (10%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLK 68
+ + + A+ + + +VLV+ + K +D++ +
Sbjct: 52 KPMSEQEPAELIEAVTSAYGQV-DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQI 106
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 62.5 bits (153), Expect = 1e-13
Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D+SN ++ +++F + ++ +N G ++ +E +F + +N K
Sbjct: 71 DLSNEEEVAKLFDFAEKEFGKV-DIAINTVGKVLKKPIVETSEAEFDAMDTINNK 124
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 62.5 bits (153), Expect = 1e-13
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ DVSN + + A+KEKF + + +VN AGI R + + +F+QV +VNL
Sbjct: 74 MAFRCDVSNYEEVKKLLEAVKEKFGKL-DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 62.1 bits (152), Expect = 1e-13
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV+ S + + + ++F + +V++N AG+ +++ D+ +V D NL
Sbjct: 65 DVTVESDVINLVQSAIKEFGKL-DVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 62.2 bits (152), Expect = 2e-13
Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D+S S + F + +++ +G+ L++T++ F +VF++N +
Sbjct: 79 DISKPSEVVALFDKAVSHFGGL-DFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 61.7 bits (151), Expect = 2e-13
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+D+ + + R +VLVN A I L + ++++V +VNL
Sbjct: 54 FQVDLEDERERVRFVEEAAYALGRV-DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT 110
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 61.3 bits (150), Expect = 3e-13
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ LP D+ + E +VLV+ A + L+L+ +++++V ++L
Sbjct: 46 VPLPTDLEKDD-PKGLVKRALEALGGL-HVLVHAAAVNVRKPALELSYEEWRRVLYLHLD 103
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 61.4 bits (150), Expect = 3e-13
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDV 65
S D+S++ I+ + + R +VLVN AG+ + ++ + V
Sbjct: 79 EAESHACDLSHSDAIAAFATGVLAAHGRC-DVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137
Query: 66 NLK 68
NLK
Sbjct: 138 NLK 140
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 61.4 bits (150), Expect = 4e-13
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV+N + ++ I +++ +VLVN AGI ++ +++++ DVNL
Sbjct: 54 DVTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRIIDVNLF 107
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 61.0 bits (149), Expect = 4e-13
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
V + + + + F + + + AG T D+ L + + + V V+L
Sbjct: 81 QVDSYESCEKLVKDVVADFGQI-DAFIANAGATADSGILDGSVEAWNHVVQVDLN 134
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 60.7 bits (148), Expect = 5e-13
Identities = 13/60 (21%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ LP+D+++ + T + I +K+ ++LVN A + D + + +F+++ ++N+
Sbjct: 62 IVLPLDITDCTKADTEIKDIHQKYGAV-DILVNAAAMFMDGSLSEPVD-NFRKIMEINVI 119
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 61.1 bits (149), Expect = 5e-13
Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+V I + F + +++ + +G+ +T ++F +VF +N +
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKL-DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 140
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 61.1 bits (149), Expect = 5e-13
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L L MDV + A+ ++F R ++L+NCA L+ F+ V D++
Sbjct: 80 LPLSMDVRAPPAVMAAVDQALKEFGRI-DILINCAAGNFLCPAGALSFNAFKTVMDIDTS 138
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 61.1 bits (149), Expect = 5e-13
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT---RDNWFLKLTEKDFQQVFDV 65
+ L D+++ S+ + A+ +F R + LVN AGI RD+ FL L ++F + V
Sbjct: 82 IFLRADLADLSSHQATVDAVVAEFGRI-DCLVNNAGIASIVRDD-FLDLKPENFDTIVGV 139
Query: 66 NLK 68
NL+
Sbjct: 140 NLR 142
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 60.6 bits (148), Expect = 6e-13
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ D+++ +S K + ++LVN AG + DF++ +++N+
Sbjct: 63 FACRCDITSEQELSALADFAISKLGKV-DILVNNAGGGGPK-PFDMPMADFRRAYELNVF 120
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 60.7 bits (148), Expect = 8e-13
Identities = 10/60 (16%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ DV + + +S + + P N+++N A + +L+ ++ + D+ L
Sbjct: 79 HAIQCDVRDPDMVQNTVSELIKVAGHP-NIVINNAAGNFISPTERLSPNAWKTITDIVLN 137
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 59.9 bits (146), Expect = 1e-12
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D+ I F ++ V+ +G+ +TE++F +VF +N +
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHL-DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTR 129
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 59.9 bits (146), Expect = 1e-12
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DVS+ I + A F + LV AG+ + T +DF +V +NL+
Sbjct: 78 AACRVDVSDEQQIIAMVDACVAAFGGV-DKLVANAGVVHLASLIDTTVEDFDRVIAINLR 136
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 59.4 bits (145), Expect = 1e-12
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +D+ + A+ I P ++LVN A + FL++T++ F + F VNL+
Sbjct: 56 PVCVDLGDWDATEKALGGIG-----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR 109
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 59.4 bits (145), Expect = 1e-12
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+DV+ ++ +E+F + LVN AGI+ + + + F++V ++NL
Sbjct: 56 QHLDVTIEEDWQRVVAYAREEFGSV-DGLVNNAGISTGMFLETESVERFRKVVEINLT 112
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 59.5 bits (145), Expect = 2e-12
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ D+++ + + +R +VLVN AGI +++ +++V VNL
Sbjct: 82 EAVVADLADLEGAANVAEELAA--TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLD 139
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 59.5 bits (145), Expect = 2e-12
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DVS+ + + K+ R +VLVN AG + + E+ + ++ VN+K
Sbjct: 76 FGVRVDVSSAKDAESMVEKTTAKWGRV-DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVK 134
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 59.5 bits (145), Expect = 2e-12
Identities = 10/74 (13%), Positives = 28/74 (37%), Gaps = 13/74 (17%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK----- 68
DV + + + + ++ ++ ++ + AGI+ ++ + +V NL
Sbjct: 79 DVKDRAALESFVAEAEDTLGGI-DIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNT 137
Query: 69 -------LVDRRGG 75
++ R G
Sbjct: 138 IAAVAPGMIKRNYG 151
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 59.5 bits (145), Expect = 2e-12
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDFQQVFDVNL 67
S+ MDV+NT ++ A+ ++ E+ R ++LV CAGI +T+ + + D+NL
Sbjct: 65 SSVVMDVTNTESVQNAVRSVHEQEGRV-DILVACAGICISEVKAEDMTDGQWLKQVDINL 123
Query: 68 K 68
Sbjct: 124 N 124
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 59.4 bits (145), Expect = 2e-12
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+ DV++ ++ A + E + ++LVN AGI R + L+ + ++QV VN
Sbjct: 59 VAARIVADVTDAEAMTAAAAEA-EAVAPV-SILVNSAGIARLHDALETDDATWRQVMAVN 116
Query: 67 LK 68
+
Sbjct: 117 VD 118
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 59.4 bits (145), Expect = 2e-12
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+++N S + K S ++LV AGIT D +++ ++DF +V D+NLK
Sbjct: 65 EVCNLANKEECS----NLISKTSNL-DILVCNAGITSDTLAIRMKDQDFDKVIDINLK 117
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 59.5 bits (145), Expect = 2e-12
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D + I A+ E ++LVN AGI + T DF +V VN +
Sbjct: 89 DNRDAEAIEQAIRETVEALGGL-DILVNSAGIWHSAPLEETTVADFDEVMAVNFR 142
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 59.0 bits (144), Expect = 2e-12
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +D+ + A+ ++ P ++LVN A + FL++T++ F + F+VNL+
Sbjct: 56 PVCVDLGDWEATERALGSVG-----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR 109
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 59.1 bits (144), Expect = 2e-12
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D++ I+ + IK + + AGI + + ++V D+N+
Sbjct: 52 DLTKQQDITNVLDIIK--NVSF-DGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 59.1 bits (144), Expect = 2e-12
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG-ITRDNWFLKLTEKDFQQVFDV 65
D++ + + KF +VL+N AG + ++ + + V D
Sbjct: 58 DAAFFAADLATSEACQQLVDEFVAKFGGI-DVLINNAGGLVGRKPLPEIDDTFYDAVMDA 116
Query: 66 NLK 68
N++
Sbjct: 117 NIR 119
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 58.7 bits (143), Expect = 3e-12
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+ + D+++ + A +A E P ++++CAG T + ++V + N
Sbjct: 50 AVIGIVADLAHHEDVDVAFAAAVEWGGLP-ELVLHCAGTGEFGPVGVYTAEQIRRVMESN 108
Query: 67 LK 68
L
Sbjct: 109 LV 110
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 58.7 bits (143), Expect = 3e-12
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV+ + A+ F +VLVN AGI ++Q++ DVNL
Sbjct: 61 DVTQPAQWKAAVDTAVTAFGGL-HVLVNNAGILNIGTIEDYALTEWQRILDVNLT 114
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 58.8 bits (143), Expect = 3e-12
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L+L D+ + A++A + F ++LVN A L K F + VN +
Sbjct: 65 LALKCDIREEDQVRAAVAATVDTFGGI-DILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 58.3 bits (142), Expect = 4e-12
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+L D+++ + I+ +A + ++L AG++ F +++E + + F VN K
Sbjct: 57 HALRSDIADLNEIAVLGAAAGQTLGAI-DLLHINAGVSELEPFDQVSEASYDRQFAVNTK 115
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 57.9 bits (141), Expect = 7e-12
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV+ I + R +VL N AG L EKD+ ++N++
Sbjct: 58 DVTKKKQIDQFA----NEVERL-DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR 107
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 57.6 bits (140), Expect = 8e-12
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEK----DFQQVFDVNL 67
DV+N + + A++ K++F + LVNCAG L + F + VNL
Sbjct: 59 NADVTNEADATAALAFAKQEFG-HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNL 117
Query: 68 K 68
Sbjct: 118 I 118
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 58.0 bits (141), Expect = 8e-12
Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV + +++ + +F ++LV+ GI+ + LT++ + + NL
Sbjct: 115 DVRDLASLQAVVDEALAEFGHI-DILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 57.2 bits (139), Expect = 1e-11
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPN-----VLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ + + S++ + +L+N AGI + + TE+ F ++ VN K
Sbjct: 65 NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 124
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 57.2 bits (139), Expect = 1e-11
Identities = 10/60 (16%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L + +DV+ + + +++ F ++LVN AG + ++ ++ +Q +++ +
Sbjct: 60 LEVAVDVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELLVM 118
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 56.3 bits (137), Expect = 2e-11
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D S+ + A ++ F + LVN AGI + + T +++++ VNL
Sbjct: 59 FQHDSSDEDGWTKLFDATEKAFGPV-STLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 56.5 bits (137), Expect = 2e-11
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEK------DFQQVFDV 65
P DV++ + TA++ K KF +V VNCAGI + L + DFQ+V DV
Sbjct: 64 PADVTSEKDVQTALALAKGKFG-RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 66 NLK 68
NL
Sbjct: 123 NLM 125
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 56.4 bits (137), Expect = 3e-11
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+DV+N + A+ +K+ R ++LVN AGI + + + ++++ DVN+
Sbjct: 58 FKIDVTNEEEVKEAVEKTTKKYGRI-DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 56.4 bits (136), Expect = 3e-11
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +DV + IS A+ +KF ++LVN A L K + +VN +
Sbjct: 104 LPCIVDVRDEQQISAAVEKAIKKFGGI-DILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 56.0 bits (136), Expect = 3e-11
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+ D+ I ++ ++LV G R F++L +D+ + + +
Sbjct: 59 QVDIVAGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLL 116
Query: 67 LK 68
+
Sbjct: 117 AR 118
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 56.1 bits (136), Expect = 3e-11
Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
++ +D N ++ ++A P V + G + L+ T++ F++V+++
Sbjct: 59 VARSLDARNEDEVTAFLNAADAHA--PLEVTIFNVGANVNFPILETTDRVFRKVWEMACW 116
Query: 69 ------------LVDRRGGT 76
++ G
Sbjct: 117 AGFVSGRESARLMLAHGQGK 136
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 56.0 bits (136), Expect = 3e-11
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV + + + ++ E+F R +V+V AG+ +LT++ + V VNL
Sbjct: 85 DVRDDAALRELVADGMEQFGRL-DVVVANAGVLSWGRVWELTDEQWDTVIGVNLT 138
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 56.1 bits (136), Expect = 3e-11
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L D+S + + + R ++LVN AGI + + + +NL
Sbjct: 58 LYDGADLSKGEAVRGLVDNAVRQMGRI-DILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 56.0 bits (136), Expect = 3e-11
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDFQQVFDVNL 67
S DV++ + + ++ F + + L N AG DF +V +N+
Sbjct: 59 RSYVCDVTSEEAVIGTVDSVVRDFGKI-DFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117
Query: 68 K 68
Sbjct: 118 T 118
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 56.1 bits (136), Expect = 3e-11
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTE----KDFQQVFD 64
S+ DV+ +++ ++F + +VLVN AG + F + +
Sbjct: 61 NSVVADVTTEDGQDQIINSTLKQFGKI-DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 65 VNLK 68
+NL+
Sbjct: 120 LNLQ 123
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 55.6 bits (135), Expect = 4e-11
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ DVS+ + + M+A++ + NVLVN AGI +DF ++ +N +
Sbjct: 57 VRHDVSSEADWTLVMAAVQRRLGTL-NVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 55.7 bits (135), Expect = 5e-11
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L P D++ S I+ M+ + ++F ++LVN AG+ + + ++ VNL
Sbjct: 79 LHHPADMTKPSEIADMMAMVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLS 137
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 55.2 bits (134), Expect = 5e-11
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKL---TEKDFQQVFDVNLK 68
+ A + + +V+ I R L L +E D +Q+F+
Sbjct: 52 IALAEQKPERLVDATLQHGEAI-DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSI 108
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 54.9 bits (133), Expect = 7e-11
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ P D+S+ + I + + +F ++LVN AGI + + + ++ +NL
Sbjct: 54 VHHPADLSDVAQIEALFALAEREFGGV-DILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 55.3 bits (134), Expect = 7e-11
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVNLK 68
DV N + I+ SA+ +F R + LVN AGI +++ + +++ VN+
Sbjct: 84 DVGNAADIAAMFSAVDRQFGRL-DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVT 138
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 55.5 bits (134), Expect = 7e-11
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 15 VSNTSTISTAMSAIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
V++ + + ++ + F +V++N AGI RD K+TEKD++ V DV+L
Sbjct: 69 VADYNNVLDGDKIVETAVKNFGTV-HVIINNAGILRDASMKKMTEKDYKLVIDVHLN 124
Score = 52.0 bits (125), Expect = 1e-09
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 15 VSNTSTISTAMSAI----KEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ ++ AI +K+ ++LVN AGI RD F K++++++ V V+L
Sbjct: 372 WPDQHDVAKDSEAIIKNVIDKYGTI-DILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 54.9 bits (133), Expect = 7e-11
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDN-WFLKLTEKDFQQVFDVNL 67
++ DV + ++ +A++ +F+R ++LVN AG ++T + + + NL
Sbjct: 86 RAVVCDVGDPDQVAALFAAVRAEFARL-DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144
Query: 68 K 68
Sbjct: 145 T 145
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 55.1 bits (133), Expect = 8e-11
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+V++ + + E F +VLVN AGI RD +E++F V V+LK
Sbjct: 94 NVADWDQAAGLIQTAVETFGGL-DVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 54.9 bits (133), Expect = 9e-11
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDFQQVFDVNL 67
++L DVS+ + A+ + KF +++V AGI L ++ + VNL
Sbjct: 80 IALEADVSDELQMRNAVRDLVLKFGHL-DIVVANAGINGVWAPIDDLKPFEWDETIAVNL 138
Query: 68 K 68
+
Sbjct: 139 R 139
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 54.5 bits (132), Expect = 1e-10
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG-ITRDNWFLKLTEKDFQQVFDVNL 67
L++ D++N + + A+SA +KF + LV+ AG + ++ E + QV DVNL
Sbjct: 61 LAIKADLTNAAEVEAAISAAADKFGEI-HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119
Query: 68 K 68
Sbjct: 120 T 120
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 54.5 bits (132), Expect = 1e-10
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 21 ISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + + EK ++LV AG + +F +LT +DF++ D
Sbjct: 68 LRKDLDLLFEKVKEV-DILVLNAGGPKAGFFDELTNEDFKEAIDSLFL 114
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 54.6 bits (132), Expect = 1e-10
Identities = 9/61 (14%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNL 67
+ D++ S + ++A + + + LV AG+ ++ +++++D+N
Sbjct: 53 FYVVGDITEDSVLKQLVNAAVKGHGKI-DSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111
Query: 68 K 68
Sbjct: 112 F 112
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 54.4 bits (132), Expect = 1e-10
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW---FLKLTEKDFQQVFDV 65
L + DV++ ++ A++A E+F +VLVN AGIT ++ + F +V V
Sbjct: 55 LRVRADVADEGDVNAAIAATMEQFGAI-DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113
Query: 66 NLK 68
N++
Sbjct: 114 NVR 116
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 54.7 bits (132), Expect = 1e-10
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 15 VSNTSTISTAMSAIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
V+N ++ +K + F R +V+VN AGI RD F +++++D+ + V+L+
Sbjct: 70 VANYDSVEAGEKLVKTALDTFGRI-DVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 125
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 54.1 bits (131), Expect = 1e-10
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDV 65
L++ D+S + + A+ A KF + ++LVN AGI + ++F ++ V
Sbjct: 56 AALAVAADISKEADVDAAVEAALSKFGKV-DILVNNAGIGHKPQNAELVEPEEFDRIVGV 114
Query: 66 NLK 68
N++
Sbjct: 115 NVR 117
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 54.2 bits (131), Expect = 2e-10
Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L + D+ + ++ A++ E+F ++ VN A ++ K F + + ++
Sbjct: 68 LPIVGDIRDGDAVAAAVAKTVEQFGGI-DICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 53.7 bits (130), Expect = 2e-10
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNLK 68
+ DV+ + T +S +F R + +VN AG + + + F+Q+ ++NL
Sbjct: 59 ILCDVTQEDDVKTLVSETIRRFGRL-DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLL 116
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 53.8 bits (130), Expect = 2e-10
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL----KLTEKDFQQVFDVNL 67
DV+ + A++ +E+ P +V+ AG+ L + F++V +VNL
Sbjct: 45 EGDVTREEDVRRAVARAQEEA--PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNL 102
Query: 68 K 68
Sbjct: 103 L 103
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 53.7 bits (130), Expect = 2e-10
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D S + I + +K + S +V+ A +F ++F V++
Sbjct: 79 DFSCETGIMAFIDLLKTQTSSL-RAVVHNASEWLAE-TPGEEADNFTRMFSVHML 131
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 53.7 bits (130), Expect = 2e-10
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D + + + R +++V AG+ + +T +DF+ V D+N+
Sbjct: 81 DTRDFDRLRKVVDDGVAALGRL-DIIVANAGVAAPQAWDDITPEDFRDVMDINVT 134
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 53.8 bits (130), Expect = 2e-10
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL--KLTEKDFQQVFDVN 66
++ DV+ S ++ KF + ++LVN AG + + +Q+ F +N
Sbjct: 81 NAVVADVTEASGQDDIINTTLAKFGKI-DILVNNAGANLADGTANTDQPVELYQKTFKLN 139
Query: 67 LK 68
+
Sbjct: 140 FQ 141
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 53.3 bits (129), Expect = 3e-10
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLK 68
DVS + + E +SR +VL N AGI +++++ +++V VNL
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRI-DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLY 118
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 53.3 bits (129), Expect = 3e-10
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNL 67
V ++ ++LV+ A + + TE+ + ++ VN+
Sbjct: 66 TGTVCHVGKAEDRERLVAMAVNLHGGV-DILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124
Query: 68 K 68
K
Sbjct: 125 K 125
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 52.9 bits (128), Expect = 4e-10
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D +N + + +K + R +VL AG ++TE+ + FD N+K
Sbjct: 83 DSANLAELDRLYEKVKAEAGRI-DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVK 136
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 52.9 bits (128), Expect = 4e-10
Identities = 9/61 (14%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAG-ITRDNWFLKLTEKDFQQVFDVNL 67
LS+ D+++ + ++ + + + R +V++N A + F T + + ++ +
Sbjct: 63 LSVGTDITDDAQVAHLVDETMKAYGRV-DVVINNAFRVPSMKPFANTTFEHMRDAIELTV 121
Query: 68 K 68
Sbjct: 122 F 122
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 53.0 bits (128), Expect = 5e-10
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNL 67
L +P DV++ ++ +A EKF R +VL N AG + LT ++QV D NL
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRV-DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNL 135
Query: 68 K 68
Sbjct: 136 T 136
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 52.6 bits (127), Expect = 5e-10
Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ D+ + +K + LV+ A + RD + ++ D+N+
Sbjct: 53 IESDIVKEVLEEGGVDKLKN-LDHV-DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVI 108
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 52.6 bits (127), Expect = 6e-10
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL--KLTEKDFQQVFDVN 66
+ ++S+ ++ +S ++ F +V V AG+T + ++ V+
Sbjct: 86 KAYKCNISDPKSVEETISQQEKDFGTI-DVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144
Query: 67 LK 68
L
Sbjct: 145 LN 146
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 52.3 bits (126), Expect = 6e-10
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPP-NVLVNCAGITRDNW-FLKLTEKDF 59
+ S H+ LP+ V+ ++ T +S + E ++L+N AG+ +
Sbjct: 48 IKDSRVHV-LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVI 106
Query: 60 QQVFDVN 66
+ DVN
Sbjct: 107 AEQLDVN 113
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 52.6 bits (127), Expect = 6e-10
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 7 THLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD-----FQQ 61
+ + DV + A F + + L+ AGI + L +D F
Sbjct: 52 NAVGVVGDVRSLQDQKRAAERCLAAFGKI-DTLIPNAGIWDYSTALADLPEDKIDAAFDD 110
Query: 62 VFDVNLK 68
+F VN+K
Sbjct: 111 IFHVNVK 117
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 52.2 bits (126), Expect = 8e-10
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQ 61
+ + D+ + EK+ + ++L+N GI + + ++D+ +
Sbjct: 57 QYPDAILQPVVADLGTEQGCQ----DVIEKYPKV-DILINNLGIFEPVEYFDIPDEDWFK 111
Query: 62 VFDVNLK 68
+F+VN+
Sbjct: 112 LFEVNIM 118
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 52.3 bits (126), Expect = 8e-10
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+ +D SN I ++ +K + ++LVN AG+ + + ++ F+VN+
Sbjct: 83 HTFVVDCSNREDIYSSAKKVKAEIG-DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNV 140
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 51.8 bits (125), Expect = 9e-10
Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDFQQVFDVNL 67
++L ++ + + ++ +F R + L++ A I +L ++DF QV VN+
Sbjct: 69 IALNLENATAQQYRELAARVEHEFGRL-DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127
Query: 68 K 68
Sbjct: 128 N 128
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 51.4 bits (124), Expect = 1e-09
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQV 62
+ L+ DVS+ + + ++A E+F R + N AGI + N T +F +V
Sbjct: 62 PDAEVLTTVADVSDEAQVEAYVTATTERFGRI-DGFFNNAGIEGKQNPTESFTAAEFDKV 120
Query: 63 FDVNLK 68
+NL+
Sbjct: 121 VSINLR 126
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 51.7 bits (124), Expect = 1e-09
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 15 VSNTSTISTAMSAIK---EKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
V++ +++ I+ + F R ++LVN AGI RD +K +E+D+ V DV+LK
Sbjct: 80 VADYNSVIDGAKVIETAIKAFGRV-DILVNNAGILRDRSLVKTSEQDWNLVNDVHLK 135
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 51.5 bits (124), Expect = 2e-09
Identities = 4/65 (6%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
G+++ + + + + ++ + ++L+ ++
Sbjct: 76 GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL-DMLILNHITNTSLNLFHDDIHHVRKSM 134
Query: 64 DVNLK 68
+VN
Sbjct: 135 EVNFL 139
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 51.4 bits (124), Expect = 2e-09
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI----TRDNWFLKLTEKDFQQVFD 64
S+ DV+ + +S KF + ++LVN AG ++ + + + +
Sbjct: 61 NSVVADVTTDAGQDEILSTTLGKFGKL-DILVNNAGAAIPDSQSKTGTAQSIESYDATLN 119
Query: 65 VNLK 68
+NL+
Sbjct: 120 LNLR 123
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 51.1 bits (123), Expect = 2e-09
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL----KLTEKDFQQVFDVNL 67
DV++ + +++A+ + E ++VNCAG L + F+++ D+NL
Sbjct: 58 AADVTDEAAVASAL-DLAETMG-TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINL 115
Query: 68 K 68
Sbjct: 116 V 116
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 51.0 bits (123), Expect = 2e-09
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNW-FLKLTEKDFQQVFDVNL 67
P D++N + A+ A+ R + +V+CAG + + ++ + +++ D+N+
Sbjct: 66 RYEPTDITNEDETARAVDAVTAWHGRL-HGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124
Query: 68 K 68
Sbjct: 125 N 125
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 50.8 bits (122), Expect = 3e-09
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 10 SLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNLK 68
S + S I + + I K + + V AG N K + + D+NL
Sbjct: 63 SFTIKDSGEEEIKSVIEKINSKSIKV-DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLY 121
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 50.6 bits (122), Expect = 3e-09
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNL 67
L + + I + R + +++ AG+ D + + + +Q V VN+
Sbjct: 67 FILDLLTCTSENCQQLAQRIAVNYPRL-DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125
Query: 68 K 68
Sbjct: 126 N 126
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 50.4 bits (121), Expect = 4e-09
Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Query: 12 PMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLK-----LTEKDFQQVFDVN 66
+V++ ++ A+ A + R +V G ++ F + D+
Sbjct: 82 STNVTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLY 140
Query: 67 LK 68
L
Sbjct: 141 LN 142
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 50.2 bits (121), Expect = 4e-09
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT--RDNWFLKLTEKDFQQVFDVN 66
+ +D++N ++ + + F R +++ N A + D ++T + F VN
Sbjct: 60 VHHVVDLTNEVSVRALIDFTIDTFGRL-DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118
Query: 67 LK 68
+
Sbjct: 119 AR 120
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 49.9 bits (120), Expect = 5e-09
Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNLK 68
DV + + A+ + R ++++ A + + L ++ K ++ + DVNL
Sbjct: 97 DVRDFDAMQAAVDDGVTQLGRL-DIVLANAALASEGTRLNRMDPKTWRDMIDVNLN 151
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 49.7 bits (119), Expect = 5e-09
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPP-NVLVNCAGITRDNW-FLKLTEKDFQQVFDVN 66
L +D+ N ++ I+ NVL N AGI + + ++ N
Sbjct: 77 LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTN 134
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 49.6 bits (119), Expect = 7e-09
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 15/69 (21%)
Query: 14 DVSNTSTISTA----MSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKD----------F 59
D++N++ + + +++ F R +VLVN A ++ +D
Sbjct: 82 DLTNSNVLPASCEEIINSCFRAFGRC-DVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 60 QQVFDVNLK 68
++ N
Sbjct: 141 AELIGTNAI 149
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 49.3 bits (118), Expect = 8e-09
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ DV + + +V+ + AGI ++ D++ V D++L
Sbjct: 83 HGVVCDVRHLDEMVRLADEAFRLLGGV-DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLW 141
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 49.2 bits (118), Expect = 1e-08
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ D+SN I + SAI+ + S ++ +N AG+ R + L + ++ +F+VN+
Sbjct: 86 IPYRCDLSNEEDILSMFSAIRSQHSGV-DICINNAGLARPDTLLSGSTSGWKDMFNVNVL 144
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 48.8 bits (117), Expect = 1e-08
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 21/87 (24%)
Query: 9 LSLPMDVSNTSTISTAMSAI-KEKFSRPPNVLVNCAGI-------TRDNWFLKLTEKDFQ 60
+ + D S S + + + +E+ R +VLVN A TR+ F + +
Sbjct: 57 VPVVCDSSQESEVRSLFEQVDREQQGRL-DVLVNNAYAGVQTILNTRNKAFWETPASMWD 115
Query: 61 QVFDVNLK------------LVDRRGG 75
+ +V L+ +V G
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQG 142
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 48.4 bits (116), Expect = 2e-08
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 16/75 (21%)
Query: 9 LSLPMDVSNTSTISTA----MSAIKEKFSRPPNVLVNCAGITRDNWFL-----------K 53
+ D+S +S++ + F R +VLVN A L K
Sbjct: 65 VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRC-DVLVNNASAYYPTPLLPGDDTNGAADAK 123
Query: 54 LTEKDFQQVFDVNLK 68
+ ++F N
Sbjct: 124 PIDAQVAELFGSNAV 138
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 48.4 bits (116), Expect = 2e-08
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV++ + + + F R ++LVN AG+ EK++++ +NL
Sbjct: 66 DVADQQQLRDTFRKVVDHFGRL-DILVNNAGVNN--------EKNWEKTLQINLV 111
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 48.0 bits (115), Expect = 3e-08
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +DV + + +S ++ +F + +V+V AGI L + F FDV+
Sbjct: 74 YTAEVDVRDRAAVSRELANAVAEFGKL-DVVVANAGICPLGA--HLPVQAFADAFDVDFV 130
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 47.3 bits (113), Expect = 3e-08
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ +D++N +I E+ + + +V+ G + +LT + L
Sbjct: 39 VTVDITNIDSIKKMY----EQVGKV-DAIVSATGSATFSPLTELTPEKNAVTISSKLG 91
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 47.5 bits (114), Expect = 3e-08
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 20/91 (21%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+DVS ++ + E+F +V+V AG+ +L+E++F ++ +VNL
Sbjct: 55 FYHHLDVSKAESVEEFSKKVLERFGDV-DVVVANAGLGYFKRLEELSEEEFHEMIEVNLL 113
Query: 69 ------------LVDRRGG-------TAGKV 80
L G + ++
Sbjct: 114 GVWRTLKAFLDSLKRTGGLALVTTSDVSARL 144
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 47.2 bits (113), Expect = 6e-08
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV + ++S A+ A ++ R +++V AGI + + + V DVNL
Sbjct: 82 DVRDRESLSAALQAGLDELGRL-DIVVANAGIAP----MSAGDDGWHDVIDVNLT 131
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 47.0 bits (112), Expect = 6e-08
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
+ + +DV++ A ++ +F ++L N AG+ + + D+ + VNL
Sbjct: 62 MGVQLDVASREGFKMAADEVEARFGPV-SILCNNAGVNLFQPIEESSYDDWDWLLGVNLH 120
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 46.8 bits (112), Expect = 7e-08
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGIT-RDNWFLKLTEKDFQQVFDVNL 67
+L DV + + + +F + N AG L+ + +++ D NL
Sbjct: 60 AALAGDVGDEALHEALVELAVRRFGGL-DTAFNNAGALGAMGEISSLSVEGWRETLDTNL 118
Query: 68 K 68
Sbjct: 119 T 119
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 46.4 bits (111), Expect = 7e-08
Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 13/74 (17%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK-- 68
LP D+++ A+ E+ ++LV+ G + +++ +L
Sbjct: 47 LPADLAD----ELEAKALLEEAGPL-DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTA 101
Query: 69 ------LVDRRGGT 76
++G
Sbjct: 102 AFVLKHARFQKGAR 115
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 46.0 bits (110), Expect = 1e-07
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFL-KLTEKDFQQVFDVNLK 68
DV + + A+ + E+ R +++V AGI L K +E+D+ ++ D+NL
Sbjct: 84 DVRDYDALKAAVDSGVEQLGRL-DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLA 138
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 45.9 bits (109), Expect = 1e-07
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 15/78 (19%)
Query: 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQ---- 60
+ V+ + + ++A + R +VLVN A L+ E +
Sbjct: 113 PVSGADGSAPVTLFTRCAELVAACYTHWGRC-DVLVNNASSFYPTPLLRNDEDGHEPCVG 171
Query: 61 ----------QVFDVNLK 68
+F N
Sbjct: 172 DREAMETATADLFGSNAI 189
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 45.8 bits (109), Expect = 1e-07
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 15/78 (19%)
Query: 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQ---- 60
+ V+ + + ++A + R +VLVN A L+ E +
Sbjct: 76 PVSGADGSAPVTLFTRCAELVAACYTHWGRC-DVLVNNASSFYPTPLLRNDEDGHEPCVG 134
Query: 61 ----------QVFDVNLK 68
+F N
Sbjct: 135 DREAMETATADLFGSNAI 152
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 45.7 bits (109), Expect = 2e-07
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 10/59 (16%)
Query: 11 LPMDVS-NTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
DV+ + + I ++ ++L+N AGI D+ ++ +N
Sbjct: 60 HTYDVTVPVAESKKLLKKIFDQLKTV-DILINGAGILDDH--------QIERTIAINFT 109
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 45.6 bits (109), Expect = 2e-07
Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI-TRDNWFLKLTEKDFQQVFDVNL 67
+ LP D+S+ + + N+LVN +T + ++ F +N+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSL-NILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158
Query: 68 K 68
Sbjct: 159 F 159
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 44.8 bits (107), Expect = 3e-07
Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI--TRDNWFLKLTEKDFQQVFDVNLK 68
DV+ + + K + +++ G+ T L+ +DF++V D+N+
Sbjct: 72 DVTKDEDVRNLVDTTIAKHGKL-DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 44.4 bits (106), Expect = 4e-07
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L LP DV + A++A++E F + LVN AG+ +LT ++++ V D NL
Sbjct: 53 LPLPGDVREEGDWARAVAAMEEAFGEL-SALVNNAGVGVMKPVHELTLEEWRLVLDTNLT 111
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 43.5 bits (103), Expect = 9e-07
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKF---SRPPNVLVNCAGITRDNWFLKLTEKD---FQQV 62
+ D+ + + +SA++E +L+N A D L D
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 63 FDVNLK 68
+ +NL
Sbjct: 123 WALNLT 128
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 43.7 bits (104), Expect = 1e-06
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGI-TRDNWFLKLTEKDFQQVFDVNL 67
+ LP D+S+ S + + +E ++L AG T LT + FQQ F VN+
Sbjct: 103 VLLPGDLSDESFARSLVHKAREALGGL-DILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 68 K 68
Sbjct: 162 F 162
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 43.3 bits (103), Expect = 1e-06
Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L+ +DV++ +++ A + + R +VLVN AG+ + + +++++ DVN+K
Sbjct: 56 LAQVLDVTDRHSVAAFAQAAVDTWGR-IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK 114
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 43.2 bits (102), Expect = 1e-06
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+L +DV + ++ A+ I + R +VL++ AG T + F +++D+N+
Sbjct: 62 RTLELDVQSQVSVDRAIDQIIGEDGR-IDVLIHNAGHMVFGPAEAFTPEQFAELYDINV 119
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 43.0 bits (102), Expect = 2e-06
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
++ +DV++ I + + ++ R +VLVN AG T+ F + TE++ + +F++++
Sbjct: 54 EAISLDVTDGERIDVVAADVLARYGR-VDVLVNNAGRTQVGAFEETTERELRDLFELHV 111
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 42.1 bits (100), Expect = 3e-06
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +DV++ + A+++ E ++LVN AGI D+ ++ D NL
Sbjct: 59 HVLELDVADRQGVDAAVASTVEALGG-LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 117
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 41.8 bits (99), Expect = 3e-06
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 22/93 (23%)
Query: 5 SSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFD 64
S+ D+++ + + P+ +V+ AG + + Q + +
Sbjct: 46 SNNVGYRARDLASHQEVEQLFEQLDSI----PSTVVHSAGSGYFGLLQEQDPEQIQTLIE 101
Query: 65 VNLK------------LVDRRGG------TAGK 79
NL D+ TA +
Sbjct: 102 NNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ 134
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 41.8 bits (99), Expect = 3e-06
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
L +DV++ T TA++ ++ + + +VN AG+ ++Q++FDVN+
Sbjct: 62 LCAQVDVTDKYTFDTAITRAEKIYGP-ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 40.0 bits (94), Expect = 2e-05
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVN 66
+D+ + +I +++++ +VLVN AGI + N
Sbjct: 59 HQLDIDDLQSIRALRDFLRKEYGGL-DVLVNNAGIAFKVADPTPFHIQAEVTMKTN 113
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 39.1 bits (92), Expect = 4e-05
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQ 60
L+ + L L +DV + + +S A+ + E+F+ L+N AG+ + D+
Sbjct: 65 LSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT-LRGLINNAGLALGTDPAQSCDLDDWD 123
Query: 61 QVFDVNLK 68
+ D N+K
Sbjct: 124 TMVDTNIK 131
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 39.2 bits (92), Expect = 4e-05
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQV 62
++ +D++ I + + ++F ++LVN AG + ++ +D Q V
Sbjct: 85 PNAKVHVAQLDITQAEKIKPFIENLPQEFKD-IDILVNNAGKALGSDRVGQIATEDIQDV 143
Query: 63 FDVNLK 68
FD N+
Sbjct: 144 FDTNVT 149
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 38.3 bits (90), Expect = 7e-05
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRD-NWFLKLTEKDFQQVFDVNL 67
+DV N + I ++++ ++ ++LVN AG+ K + +D++ + D N
Sbjct: 49 YIAQLDVRNRAAIEEMLASLPAEWCN-IDILVNNAGLALGMEPAHKASVEDWETMIDTNN 107
Query: 68 K 68
K
Sbjct: 108 K 108
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 36.6 bits (85), Expect = 3e-04
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNL 67
+L +DV ++ +++ A + E +VLV AG+ L E V DVN+
Sbjct: 60 ETLQLDVRDSKSVAAARERVTE---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short
chain dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 36.1 bits (84), Expect = 4e-04
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVFDVNLK 68
D+S A++ + K S+ + LV CAG+ K V VN
Sbjct: 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYF 88
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 35.3 bits (82), Expect = 8e-04
Identities = 7/33 (21%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 38 VLVNCAGITR--DNWFLKLTEKDFQQVFDVNLK 68
V VN G++ D L+ V
Sbjct: 83 VAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 35.0 bits (81), Expect = 0.001
Identities = 5/62 (8%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPP-NVLVNCAGI-TRDNWFLKLTEKDFQQVFDVN 66
+ + + + T + + + + AG + K K+ + +
Sbjct: 45 ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQS 104
Query: 67 LK 68
+
Sbjct: 105 VW 106
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.0 bits (80), Expect = 0.001
Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 35/91 (38%)
Query: 1 MLTGSSTHLSLPMDVSNTS----TISTAM-SAIKEKFSRPPNV------------LVNCA 43
LS T + A +K K P + L + A
Sbjct: 1718 TFRSEKGLLSAT---QFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLA 1774
Query: 44 GITRDNWFLKLTEKDFQQVFDVNLKLVDRRG 74
+ + + + +++V RG
Sbjct: 1775 DV--------M---SIESL----VEVVFYRG 1790
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 35.0 bits (81), Expect = 0.001
Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPP-NVLVNCAG-ITRDNWFLKLTEKDFQQVFDVNLK 68
+ M S T + + + + ++ AG N K K+ ++ ++
Sbjct: 51 VKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIW 110
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 30.5 bits (69), Expect = 0.048
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
DV++ T++ +++I + P +V+ AG+ D LT + QV
Sbjct: 592 DVADRETLAKVLASIPD--EHPLTAVVHAAGVLDDGVSESLTVERLDQVL 639
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+
and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia
coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Length = 883
Score = 28.9 bits (65), Expect = 0.15
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 43 AGITRDNWFLKLTEKDFQQVFD---VNLKLVDRRGGTAG 78
AG+ +W + + + + L L RGG+ G
Sbjct: 548 AGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIG 586
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 28.8 bits (65), Expect = 0.18
Identities = 3/31 (9%), Positives = 7/31 (22%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSR 34
+DV + + I +
Sbjct: 82 NQPEAHLYQIDVQSDEEVINGFEQIGKDVGN 112
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha,
beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus
tokodaii}
Length = 273
Score = 27.9 bits (63), Expect = 0.30
Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVN 66
+D+++ + + + P+V++N A +T D E + ++ + +N
Sbjct: 41 LDLTDFPRLEDFIIKKR------PDVIINAAAMTDVD-----KCEIEKEKAYKIN 84
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase,
INHA, enoyl acyl carrier reductase, pyrrolid
carboxamide; HET: NAD 566; 1.62A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A*
2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A*
2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A*
3fnh_A* 3oew_A* 2aqh_A* ...
Length = 269
Score = 28.0 bits (63), Expect = 0.35
Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 7/62 (11%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSRPPNV--LVNCAGIT-----RDNWFLKLTEKDFQQVF 63
L +DV N +++ + E + +V+ G N F D +
Sbjct: 61 LELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGI 120
Query: 64 DV 65
+
Sbjct: 121 HI 122
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 27.9 bits (63), Expect = 0.36
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 4 GSSTHLSLPMDVSNTSTISTAMSAIKEKFSR 34
+ + LP DV+N + I T ++IKE+
Sbjct: 57 DRNDSIILPCDVTNDAEIETCFASIKEQVGV 87
>2faz_A Ubiquitin-like containing PHD and ring finger DOM protein 1; cell
cycle, DNA damage, DNA repair, DNA-binding, ligase, Met
binding, nuclear protein; 2.00A {Homo sapiens} SCOP:
d.15.1.1
Length = 78
Score = 26.9 bits (60), Expect = 0.42
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 1 MLTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPN 37
+ G TH +S + + I+E F P
Sbjct: 9 TMDGRQTHTVD--SLSRLTKVEELRRKIQELFHVEPG 43
>1wy8_A NP95-like ring finger protein, isoform A; ubiquitin-like domain,
NP95/ICBP90-like ring finger (NIRF), ubiquitin ligase,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
d.15.1.1
Length = 89
Score = 26.2 bits (58), Expect = 0.67
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 1 MLTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPPN 37
+ GS T DVS +TI + F P
Sbjct: 14 TIDGSKTCTIE--DVSRKATIEELRERVWALFDVRPE 48
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase;
2.25A {Homo sapiens} PDB: 2ydx_A
Length = 315
Score = 26.8 bits (60), Expect = 0.70
Identities = 9/55 (16%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVN 66
+++ +++ + + + P+V+V+CA R D + E +N
Sbjct: 44 VNLLDSNAVHHIIHDFQ------PHVIVHCAAERRPD-----VVENQPDAASQLN 87
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics,
infectious diseases, bacillus anthracis STR. AMES,
rhamnose biosynthetic pathway; HET: NAP; 2.65A
{Bacillus anthracis}
Length = 287
Score = 26.7 bits (60), Expect = 0.81
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVN 66
+D++N S + + I+ P+++++CA T+ D EK+ + +N
Sbjct: 40 LDITNISQVQQVVQEIR------PHIIIHCAAYTKVD-----QAEKERDLAYVIN 83
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint
center for structural genomics, JCSG, protein structu
initiative; HET: NAI UNL; 2.05A {Clostridium
acetobutylicum} SCOP: c.2.1.2
Length = 292
Score = 26.7 bits (60), Expect = 0.89
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 13 MDVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITR-DNWFLKLTEKDFQQVFDVN 66
+D++N ++ + K PNV++NCA T D E+ + + +N
Sbjct: 47 LDITNVLAVNKFFNEKK------PNVVINCAAHTAVD-----KCEEQYDLAYKIN 90
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 26.8 bits (59), Expect = 1.0
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 14 DVSNTSTISTAMSAIKEKFSRPPNVLVNCAGITRDNWFLKLTEKDFQQVF 63
+ S+ + ++ + P + N A + RD T + FQ V
Sbjct: 1945 NASSLDGARSLITEATQ--LGPVGGVFNLAMVLRDAVLENQTPEFFQDVS 1992
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 26.5 bits (58), Expect = 1.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 11 LPMDVSN-TSTISTAMSAIKEKFSRPPNVLVNCAGIT 46
+DV++ +T+S+ IK F + ++LVN AG+
Sbjct: 67 HQLDVTDPIATMSSLADFIKTHFGKL-DILVNNAGVA 102
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold,
sugar-nucleotide-binding domain; HET: NAD; 2.00A
{Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A*
1kc3_A* 1kbz_A*
Length = 299
Score = 26.4 bits (59), Expect = 1.1
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSRPPNVLVNCA 43
D SN ++ + ++ P+V+VN A
Sbjct: 34 KEFCGDFSNPKGVAETVRKLR------PDVIVNAA 62
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway,
oxidoreductase, lipid metabolism, LY isomerase,
peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A
{Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A*
2x58_A*
Length = 742
Score = 26.5 bits (59), Expect = 1.3
Identities = 7/24 (29%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVL 39
+NTS ++ + I RP V+
Sbjct: 427 TNTSALN--VDDIASSTDRPQLVI 448
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric
complex, lyase, oxidoreductase/transferase complex,
lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP:
a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A*
1wdm_A* 2d3t_A*
Length = 715
Score = 26.0 bits (58), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVL 39
SNTSTIS +S + + RP N +
Sbjct: 427 SNTSTIS--ISLLAKALKRPENFV 448
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national
project on protein structural and functional analyses;
1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A
3adp_A* 3f3s_A*
Length = 319
Score = 26.2 bits (58), Expect = 1.4
Identities = 4/25 (16%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVLV 40
S++S + S + + +V
Sbjct: 121 SSSSCLL--PSKLFTGLAHVKQCIV 143
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold,
oxidoreductase; 2.20A {Caenorhabditis elegans}
Length = 460
Score = 26.1 bits (58), Expect = 1.5
Identities = 6/24 (25%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVL 39
+NTS++ ++ I P N++
Sbjct: 164 TNTSSLD--LNEISSVLRDPSNLV 185
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme
type 1, L-bifunction enzyme, MFE-1, fatty acid beta
oxidation; 1.90A {Rattus norvegicus}
Length = 463
Score = 26.1 bits (58), Expect = 1.7
Identities = 7/24 (29%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVL 39
+NTS ++ + I RP V+
Sbjct: 148 TNTSALN--VDDIASSTDRPQLVI 169
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase,
peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A
{Arabidopsis thaliana}
Length = 725
Score = 25.7 bits (57), Expect = 1.9
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 16 SNTSTISTAMSAIKEKFSRPPNVL 39
SNTSTI ++ I E+ ++
Sbjct: 425 SNTSTID--LNKIGERTKSQDRIV 446
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A*
1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A*
1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 25.6 bits (57), Expect = 2.2
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
+ L DV+ ++I T + + + + +
Sbjct: 62 IVLQCDVAEDASIDTMFAELGKVWPK 87
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 25.6 bits (57), Expect = 2.3
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 11 LPMDVSNTSTISTAMSAIKEKFSR 34
LP DV + I + + +
Sbjct: 80 LPCDVISDQEIKDLFVELGKVWDG 103
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A
{Burkholderia pseudomallei 1710B}
Length = 271
Score = 25.2 bits (56), Expect = 2.4
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
L P DV++ + I +++K +
Sbjct: 67 LVFPCDVADDAQIDALFASLKTHWDS 92
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty
acid biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 25.2 bits (56), Expect = 2.5
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
L DV+ + + +KE F
Sbjct: 61 LLFRADVTQDEELDALFAGVKEAFGG 86
>3qxb_A Putative xylose isomerase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-biology; 1.90A {Rhodospirillum rubrum}
Length = 316
Score = 25.5 bits (55), Expect = 2.7
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 67 LKLVDRRGGTAGKVCLDFGH 86
+ +D R ++ +D+GH
Sbjct: 197 MADLDGRTEIPVRLLVDWGH 216
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 25.2 bits (56), Expect = 2.7
Identities = 4/26 (15%), Positives = 10/26 (38%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
+DVS + +++K+
Sbjct: 59 YVYELDVSKEEHFKSLYNSVKKDLGS 84
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 25.3 bits (56), Expect = 2.8
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
L + DVS I ++E +
Sbjct: 74 LVVKCDVSLDEDIKNLKKFLEENWGS 99
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 25.3 bits (56), Expect = 3.0
Identities = 4/26 (15%), Positives = 15/26 (57%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
++ DV++ ++I +++K+ +
Sbjct: 84 VAGHCDVADAASIDAVFETLEKKWGK 109
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 25.3 bits (56), Expect = 3.0
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 9 LSLPMDVSNTSTISTAMSAIKEKFSR 34
L++P DVS+ ++ + E++
Sbjct: 83 LTVPCDVSDAESVDNMFKVLAEEWGS 108
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics,
riken structural genomics/proteomics in RSGI, TIM
barrel, unknown function; 1.85A {Thermus thermophilus}
PDB: 3ayt_A
Length = 254
Score = 24.8 bits (54), Expect = 4.2
Identities = 5/29 (17%), Positives = 10/29 (34%), Gaps = 1/29 (3%)
Query: 59 FQQVFDVNLKLVDRRGGTAGKVCLDFGHT 87
+ + +++ G G C D H
Sbjct: 139 HEPHPEALRPVLEAHAGELG-FCFDAAHA 166
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling
proteins; 1.15A {Saccharomyces cerevisiae} SCOP:
d.15.1.1 PDB: 2bwe_S
Length = 77
Score = 23.3 bits (51), Expect = 6.7
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 2 LTGSSTHLSLPMDVSNTSTISTAMSAIKEKFSRPP 36
+G ++V+ ST+ AI + P
Sbjct: 10 KSGQDKW---EVNVAPESTVLQFKEAINKANGIPV 41
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.133 0.394
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,258,875
Number of extensions: 60153
Number of successful extensions: 504
Number of sequences better than 10.0: 1
Number of HSP's gapped: 351
Number of HSP's successfully gapped: 218
Length of query: 87
Length of database: 6,701,793
Length adjustment: 55
Effective length of query: 32
Effective length of database: 5,166,138
Effective search space: 165316416
Effective search space used: 165316416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.2 bits)