BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3461
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3D2|HEM6_DROME Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox
PE=1 SV=1
Length = 390
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 76/84 (90%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V+K+K+ YG +ERQWQLLRRGRYVEFNLIYDRGTKFGL TPGARYESILMSLPL A+WE
Sbjct: 306 VRKHKNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHARWE 365
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YMH P+ S+EG+L+K+LKNPK+W
Sbjct: 366 YMHEPKSQSEEGKLMKVLKNPKDW 389
>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens
GN=CPOX PE=1 SV=3
Length = 454
Score = 127 bits (320), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 71/84 (84%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
VKK+ D + E+ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 369 VKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 428
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YMH+P E SKE +++++L++P++W
Sbjct: 429 YMHSPSENSKEAEILEVLRHPRDW 452
>sp|Q3B7D0|HEM6_RAT Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus
GN=Cpox PE=2 SV=1
Length = 443
Score = 127 bits (318), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/84 (66%), Positives = 71/84 (84%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
VKK+ D Y ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 358 VKKHCDDSYTPQDKLWQQLRRGRYVEFNLVYDRGTKFGLFTPGSRIESILMSLPLTARWE 417
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YMH+P E SKE +++++L++PK+W
Sbjct: 418 YMHSPPENSKEAEILEVLRHPKDW 441
>sp|P36552|HEM6_MOUSE Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus
GN=Cpox PE=1 SV=2
Length = 443
Score = 125 bits (315), Expect = 6e-29, Method: Composition-based stats.
Identities = 56/84 (66%), Positives = 71/84 (84%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
VKK+ D Y ++ WQ LRRGRYVEFNL+YDRGTKFGL TPG+R ESILMSLPLTA+WE
Sbjct: 358 VKKHCDDSYTPRDKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE 417
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YMH+P E SKE +++++L++PK+W
Sbjct: 418 YMHSPPENSKEAEILEVLRHPKDW 441
>sp|P35055|HEM6_SOYBN Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX
PE=2 SV=1
Length = 385
Score = 112 bits (279), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
++K KD + H++ WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 302 IEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 360
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H PEE S+E +L+ NPKEW
Sbjct: 361 YDHKPEEGSEEWKLLDACINPKEW 384
>sp|P11353|HEM6_YEAST Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HEM13 PE=1 SV=2
Length = 328
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 63/84 (75%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
VK+ KD Y E+QWQ +RRGRYVEFNLIYDRGT+FGL+TPG+R ESILMSLP A W
Sbjct: 243 VKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL 302
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H P S+E +L+++ P+EW
Sbjct: 303 YNHHPAPGSREAKLLEVTTKPREW 326
>sp|Q42840|HEM6_HORVU Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare
GN=CPX PE=2 SV=1
Length = 391
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
+++ KD + ++ WQ +RRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 308 IERRKDTPFNEEQKAWQQVRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 366
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H PEE S+E +L+ NPKEW
Sbjct: 367 YDHKPEEGSEEWKLLDACINPKEW 390
>sp|Q7XPL2|HEM6_ORYSJ Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa
subsp. japonica GN=CPX PE=2 SV=2
Length = 399
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
+++ KD + + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+W+
Sbjct: 314 IERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWQ 372
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y HTPEE ++E +L+ NPKEW
Sbjct: 373 YDHTPEEGTEERKLLDACINPKEW 396
>sp|Q9LR75|HEM6_ARATH Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis
thaliana GN=CPX PE=1 SV=1
Length = 386
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V+K KD + + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPL+A+WE
Sbjct: 303 VEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLSARWE 361
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H PEE ++E +L+ NPKEW
Sbjct: 362 YDHKPEEGTEEWKLLDACINPKEW 385
>sp|Q42946|HEM6_TOBAC Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum
GN=CPX PE=2 SV=1
Length = 397
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V+K KD + + WQ LRRGRYVEFNL+YDRGT FGL+T G R ESIL+SLPLTA+WE
Sbjct: 314 VEKRKDTPFTDKHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWE 372
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H PEE ++E +L+ NPKEW
Sbjct: 373 YDHKPEEGTEEWKLLDACINPKEW 396
>sp|B0TLD7|HEM6_SHEHH Coproporphyrinogen-III oxidase, aerobic OS=Shewanella halifaxensis
(strain HAW-EB4) GN=hemF PE=3 SV=1
Length = 304
Score = 105 bits (263), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG HERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +WE
Sbjct: 219 VERRKDTVYGEHERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSAEAALYSDYLKPRDW 301
>sp|A8GYI0|HEM6_SHEPA Coproporphyrinogen-III oxidase, aerobic OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=hemF PE=3 SV=1
Length = 304
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ +D YG HERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +WE
Sbjct: 219 VERRRDTEYGEHERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE E QL P++W
Sbjct: 278 YAYTPEAGGPEAQLYSDYLKPRDW 301
>sp|B1KCX1|HEM6_SHEWM Coproporphyrinogen-III oxidase, aerobic OS=Shewanella woodyi
(strain ATCC 51908 / MS32) GN=hemF PE=3 SV=1
Length = 306
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ YG ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +WE
Sbjct: 219 VQRRKETQYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YM+TPEE S E L PK+W
Sbjct: 278 YMYTPEENSPESLLYSDYLTPKDW 301
>sp|A8FP82|HEM6_SHESH Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sediminis
(strain HAW-EB3) GN=hemF PE=3 SV=1
Length = 306
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTEYGEKEREFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPEE S E L PK+W
Sbjct: 278 YAYTPEENSAEALLYTDFLKPKDW 301
>sp|Q5N3S5|HEM6_SYNP6 Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemF
PE=3 SV=1
Length = 342
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP +WE
Sbjct: 254 VERRKDTPWGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTNG-RTESILMSLPPLVRWE 312
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
YM+ PE S+E +L + P++W
Sbjct: 313 YMYQPEAGSREQELYDVFLKPQDW 336
>sp|A6WHB7|HEM6_SHEB8 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS185) GN=hemF PE=3 SV=1
Length = 302
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|A3CYL1|HEM6_SHEB5 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=hemF PE=3 SV=1
Length = 302
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|B8E3K7|HEM6_SHEB2 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS223) GN=hemF PE=3 SV=1
Length = 302
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|Q12T99|HEM6_SHEDO Coproporphyrinogen-III oxidase, aerobic OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemF PE=3
SV=1
Length = 305
Score = 99.8 bits (247), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K +G HERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +WE
Sbjct: 219 VERRKALSFGEHERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TP S E +L ++ P++W
Sbjct: 278 YGFTPAAGSVEAELYEVYLKPQDW 301
>sp|B8CHB9|HEM6_SHEPW Coproporphyrinogen-III oxidase, aerobic OS=Shewanella piezotolerans
(strain WP3 / JCM 13877) GN=hemF PE=3 SV=1
Length = 304
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ YG HERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +WE
Sbjct: 219 VERRKETEYGEHERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L P++W
Sbjct: 278 YAYIPEAGSPEAALYSDYLKPRDW 301
>sp|B2FND0|HEM6_STRMK Coproporphyrinogen-III oxidase, aerobic OS=Stenotrophomonas
maltophilia (strain K279a) GN=hemF PE=3 SV=1
Length = 298
Score = 99.4 bits (246), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KDA YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQQRKDAIYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRSESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEAGSAEARLADYLV-PRDW 297
>sp|A1S1K6|HEM6_SHEAM Coproporphyrinogen-III oxidase, aerobic OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=hemF PE=3 SV=1
Length = 304
Score = 99.0 bits (245), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER +QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTAYGERERDFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y ++PE + E +L + P++W
Sbjct: 278 YAYSPEAGTPEAELYERFLKPQDW 301
>sp|A1RDY8|HEM6_SHESW Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
W3-18-1) GN=hemF PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKETEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|A4Y1D3|HEM6_SHEPC Coproporphyrinogen-III oxidase, aerobic OS=Shewanella putrefaciens
(strain CN-32 / ATCC BAA-453) GN=hemF PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ +G ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKETEFGERERQFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|Q0I0R6|HEM6_SHESR Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
MR-7) GN=hemF PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ YG ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKETPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|Q0HPA0|HEM6_SHESM Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
MR-4) GN=hemF PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ YG ER++QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKETPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E L P++W
Sbjct: 278 YAYTPEAGSPEADLYDNYLKPRDW 301
>sp|A0KR67|HEM6_SHESA Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
ANA-3) GN=hemF PE=3 SV=1
Length = 302
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ K+ YG ER +QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKETPYGERERDFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S E +L P++W
Sbjct: 278 YAYTPEAGSPEAELYDNYLKPRDW 301
>sp|Q8EKQ2|HEM6_SHEON Coproporphyrinogen-III oxidase, aerobic OS=Shewanella oneidensis
(strain MR-1) GN=hemF PE=3 SV=1
Length = 302
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER +QL RRGRYVEFNL+YDRGT FGLQT G R ESILMS+P +W+
Sbjct: 219 VERRKDTDYGERERDFQLYRRGRYVEFNLVYDRGTLFGLQT-GGRTESILMSMPPLVRWQ 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TP S E L P++W
Sbjct: 278 YAYTPAAGSPEADLYDNYLKPRDW 301
>sp|Q8DL15|HEM6_THEEB Coproporphyrinogen-III oxidase, aerobic OS=Thermosynechococcus
elongatus (strain BP-1) GN=hemF PE=3 SV=2
Length = 338
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ + YG ERQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP +WE
Sbjct: 251 VERRRHLTYGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTNG-RTESILMSLPPLVRWE 309
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y +TPE S+E +L P++W
Sbjct: 310 YGYTPEPNSREAELYSTFLKPQDW 333
>sp|Q5GUY0|HEM6_XANOR Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv.
oryzae (strain KACC10331 / KXO85) GN=hemF PE=3 SV=1
Length = 299
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQRRKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRAESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEPGSAEARLADYLI-PRDW 297
>sp|B2SK75|HEM6_XANOP Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv.
oryzae (strain PXO99A) GN=hemF PE=3 SV=1
Length = 299
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQRRKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRAESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEPGSAEARLADYLI-PRDW 297
>sp|Q2NY70|HEM6_XANOM Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=hemF PE=3 SV=1
Length = 299
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQRRKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRAESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEPGSAEARLADYLI-PRDW 297
>sp|B4SNL7|HEM6_STRM5 Coproporphyrinogen-III oxidase, aerobic OS=Stenotrophomonas
maltophilia (strain R551-3) GN=hemF PE=3 SV=1
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQQRKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRSESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y PE S E +L L P++W
Sbjct: 275 YGFNPEAGSAEARLADYLV-PRDW 297
>sp|Q8PF76|HEM6_XANAC Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=hemF PE=3 SV=1
Length = 299
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQRRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRAESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEPGSAEARLADYLI-PRDW 297
>sp|Q3BMT4|HEM6_XANC5 Coproporphyrinogen-III oxidase, aerobic OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=hemF PE=3 SV=1
Length = 299
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMSLP +WE
Sbjct: 216 VQRRKDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRAESILMSLPPRVRWE 274
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y TPE S E +L L P++W
Sbjct: 275 YGFTPEPGSAEARLADYLI-PRDW 297
>sp|Q8YX58|HEM62_NOSS1 Coproporphyrinogen-III oxidase, aerobic 2 OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hemF2 PE=3 SV=1
Length = 347
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ + YG +R +QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP A+WE
Sbjct: 264 VERRQGIEYGDRQRNFQLYRRGRYVEFNLVYDRGTVFGLQTKG-RTESILMSLPPLARWE 322
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E +L ++ P++W
Sbjct: 323 YCYEPEAGSPEAELTEVFLQPRDW 346
>sp|Q6LLK0|HEM6_PHOPR Coproporphyrinogen-III oxidase, aerobic OS=Photobacterium profundum
GN=hemF PE=3 SV=1
Length = 301
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ +D YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMS+P A+WE
Sbjct: 219 VQRRQDTPYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRTESILMSMPPLARWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + P+ S E L + P+EW
Sbjct: 278 YCYEPKAGSAEADLYENYLQPREW 301
>sp|Q87KE3|HEM6_VIBPA Coproporphyrinogen-III oxidase, aerobic OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=hemF PE=3 SV=1
Length = 305
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + KD YG ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMS+P A+WE
Sbjct: 223 VSRRKDIEYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRTESILMSMPPLARWE 281
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE + E +L + P+EW
Sbjct: 282 YRYEPEAGTPEAELYERYLKPREW 305
>sp|Q6D8U8|HEM6_ERWCT Coproporphyrinogen-III oxidase, aerobic OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=hemF PE=3 SV=1
Length = 310
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V++ KD +G ER +QL RRGRYVEFNLI+DRGT FGLQ+ G R ESILMS+P A+WE
Sbjct: 217 VERRKDLAWGERERDFQLYRRGRYVEFNLIWDRGTLFGLQS-GGRTESILMSMPPLARWE 275
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y H PE S E L + ++W
Sbjct: 276 YQHQPEPDSPEAALYRDFLPARDW 299
>sp|Q46IN4|HEM6_PROMT Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL2A) GN=hemF PE=3 SV=1
Length = 348
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
+KK K+ + ER +QL RRGRY EFNL++DRGT FGLQT G R ESILMSLP A+WE
Sbjct: 249 IKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGLQTNG-RTESILMSLPPLARWE 307
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PEE S+E L + P++W
Sbjct: 308 YGYKPEENSREALLTDLFTKPQDW 331
>sp|A2C524|HEM6_PROM1 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL1A) GN=hemF PE=3 SV=1
Length = 348
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
+KK K+ + ER +QL RRGRY EFNL++DRGT FGLQT G R ESILMSLP A+WE
Sbjct: 249 IKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGLQTNG-RTESILMSLPPLARWE 307
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PEE S+E L + P++W
Sbjct: 308 YGYKPEENSREALLTDLFTKPQDW 331
>sp|A7N128|HEM6_VIBHB Coproporphyrinogen-III oxidase, aerobic OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=hemF PE=3 SV=1
Length = 305
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + KD +G ER++QL RRGRYVEFNL+YDRGT FGLQ+ G R ESILMS+P A+WE
Sbjct: 223 VSRRKDIEFGEREREFQLYRRGRYVEFNLVYDRGTLFGLQS-GGRTESILMSMPPLARWE 281
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + P+ S E +L + P+EW
Sbjct: 282 YSYEPQTGSPEAELYERYLTPREW 305
>sp|P72848|HEM6_SYNY3 Coproporphyrinogen-III oxidase, aerobic OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=hemF PE=3 SV=1
Length = 340
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V+K ++ YG +RQ+QL RRGRYVEFNL+YDRGT FGLQT G R ESILMSLP +W+
Sbjct: 255 VEKRRNTEYGDRQRQFQLYRRGRYVEFNLVYDRGTIFGLQTNG-RTESILMSLPPLVRWQ 313
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y ++PE S E +L + P++W
Sbjct: 314 YCYSPEAGSPEAELTEKFLVPQDW 337
>sp|B1JSJ6|HEM6_YERPY Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=hemF
PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|Q668I6|HEM6_YERPS Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=hemF
PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|A4TMK2|HEM6_YERPP Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis (strain
Pestoides F) GN=hemF PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|Q1CJZ7|HEM6_YERPN Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=hemF PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|A9QZK6|HEM6_YERPG Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=hemF PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|Q8ZCF9|HEM6_YERPE Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis GN=hemF
PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
>sp|B2K962|HEM6_YERPB Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=hemF
PE=3 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 4 VKKNKDAGYGYHERQWQLLRRGRYVEFNLIYDRGTKFGLQTPGARYESILMSLPLTAKWE 63
V + K G+G ERQ+QL RRGRYVEFNL++DRGT FGLQT G R ESILMSLP +WE
Sbjct: 219 VARRKALGWGDRERQFQLYRRGRYVEFNLVWDRGTLFGLQT-GGRTESILMSLPPLVRWE 277
Query: 64 YMHTPEETSKEGQLIKILKNPKEW 87
Y + PE S E L + K+W
Sbjct: 278 YNYQPEADSAEAALYRDFLPVKDW 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,123,145
Number of Sequences: 539616
Number of extensions: 1310485
Number of successful extensions: 2711
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2255
Number of HSP's gapped (non-prelim): 239
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)