BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3462
(795 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF + ++ GLSKWVR Q+
Sbjct: 812 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQI 871
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLEEERVKREEANLNEEEEVMDDTDRASSSQESTGGT 729
Q+ SS + +E+L F RR ++ R K++E + E ++ + ++ST +
Sbjct: 872 QHHSSFASALESLTEFSRRHQKVT---NRSKKDEKCTKDNEPTLE----VACLEDSTFTS 924
Query: 730 QSQNSTVMPQ 739
S++S P+
Sbjct: 925 VSESSHQSPE 934
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 23/90 (25%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKA 291
S + YTIGGVK+ FP +AYP+Q++MMN + ++G N +
Sbjct: 3 SVLSDYTIGGVKIHFPCRAYPAQLAMMNSI-----------------------VRGLNSS 39
Query: 292 KNCLLESPTGSGKTLALLCSVLAWQRKEKE 321
++CLLESPTGSGK+LALLCS LAWQ+ E
Sbjct: 40 QHCLLESPTGSGKSLALLCSALAWQQSLSE 69
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 69
+++G N +++CLLESPTGSGK+LALLCS LAWQ+ E
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSE 69
>sp|Q7KF90|RL31_SPOFR 60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2
SV=1
Length = 124
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/66 (71%), Positives = 57/66 (86%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
K +NEVVTR+YT+++HKRLH VGFKKRAPRAIK +R F +KQMGT DVR+DTRLNK +W
Sbjct: 11 KSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLW 70
Query: 177 SKGINN 182
SKG+ N
Sbjct: 71 SKGVRN 76
>sp|Q9GP16|RL31_HELVI 60S ribosomal protein L31 OS=Heliothis virescens GN=RpL31 PE=2 SV=1
Length = 124
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/66 (71%), Positives = 57/66 (86%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
K +NEVVTR+YT+++HKRLH VGFKKRAPRAIK +R F +KQMGT DVR+DTRLNK +W
Sbjct: 11 KSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLW 70
Query: 177 SKGINN 182
SKG+ N
Sbjct: 71 SKGVRN 76
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + S+ GLSKWVR Q+
Sbjct: 809 GLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQI 868
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 869 QHHSTFESALESLAEFSKKHQKV 891
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 23/86 (26%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKA 291
S + YTIGGVK+ FP KAYPSQ++MMN + ++G N
Sbjct: 3 SMWSEYTIGGVKIYFPYKAYPSQLAMMNSI-----------------------LRGLNSK 39
Query: 292 KNCLLESPTGSGKTLALLCSVLAWQR 317
++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 40 QHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
+++G N ++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 32 ILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQ 65
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + ++ GLSKW+R QV
Sbjct: 819 GLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQV 878
Query: 670 QNTSSHNTFMENLRNFVRR 688
Q+ + + +E+L F R
Sbjct: 879 QHHENFGSALESLHAFAER 897
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 25/123 (20%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKA 291
S + YTIGGVK+ FP KAYPSQ++MMN + ++G N
Sbjct: 3 SDVSQYTIGGVKIMFPCKAYPSQLAMMNAI-----------------------VKGLNNR 39
Query: 292 KNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQQKMFEQRTQDLQKIPFRKLKISRLK 349
++CLLESPTGSGK+LALLCS L+WQ+ EK L++ ++ + +P R + SR +
Sbjct: 40 QHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLKSSCEKEDREPAASLPCRCVCHSRSE 99
Query: 350 AKD 352
+ +
Sbjct: 100 SSE 102
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQ 72
+++G N ++CLLESPTGSGK+LALLCS L+WQ+ EK L++
Sbjct: 32 IVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLK 74
>sp|Q9V597|RL31_DROME 60S ribosomal protein L31 OS=Drosophila melanogaster GN=RpL31 PE=1
SV=1
Length = 124
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 108 TMVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
T K K +NEVVTR+ TIH+ KR+H +GFKKRAPRAIK +R F +++MGT DVRI
Sbjct: 2 TKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRI 61
Query: 168 DTRLNKHIWSKGINN 182
DTRLNKHIWSKGI +
Sbjct: 62 DTRLNKHIWSKGIRS 76
>sp|Q5RBR9|RL31_PONAB 60S ribosomal protein L31 OS=Pongo abelii GN=RPL31 PE=2 SV=1
Length = 125
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|Q9IA76|RL31_PAROL 60S ribosomal protein L31 OS=Paralichthys olivaceus GN=rpl31 PE=2
SV=1
Length = 124
Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 112 KPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
K KKK +NEVVTR+YTI++HKR+H VGFKKRAPRAIK +R F K+MGT DVRID
Sbjct: 5 KKGEKKKGRSAINEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDVRID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +WSKG+ N
Sbjct: 65 TRLNKAVWSKGVRN 78
>sp|P62902|RL31_RAT 60S ribosomal protein L31 OS=Rattus norvegicus GN=Rpl31 PE=2 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|P62901|RL31_PIG 60S ribosomal protein L31 OS=Sus scrofa GN=RPL31 PE=2 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|P62900|RL31_MOUSE 60S ribosomal protein L31 OS=Mus musculus GN=Rpl31 PE=2 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|Q1KSC7|RL31_MARMO 60S ribosomal protein L31 OS=Marmota monax GN=RPL31 PE=2 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|P62899|RL31_HUMAN 60S ribosomal protein L31 OS=Homo sapiens GN=RPL31 PE=1 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|Q56JX3|RL31_BOVIN 60S ribosomal protein L31 OS=Bos taurus GN=RPL31 PE=2 SV=1
Length = 125
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|O18602|RL31_DROVI 60S ribosomal protein L31 OS=Drosophila virilis GN=RpL31 PE=3 SV=1
Length = 128
Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 56/65 (86%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
K +NEVVTR+ TIH+ KR+H +GFKKRAPRAIK +R F +++MGT DVRIDTRLNKHIW
Sbjct: 11 KSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIW 70
Query: 177 SKGIN 181
SKGI+
Sbjct: 71 SKGIS 75
>sp|Q90YT7|RL31_ICTPU 60S ribosomal protein L31 OS=Ictalurus punctatus GN=rpl31 PE=2 SV=1
Length = 125
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 55/66 (83%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H + FKKRAPRAIK +R F K+MGT DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KG+ N
Sbjct: 74 AKGVRN 79
>sp|Q6NUH0|RL31_XENLA 60S ribosomal protein L31 OS=Xenopus laevis GN=rpl31 PE=2 SV=1
Length = 125
Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 55/66 (83%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H +GFKKRAPRA+K +R F K+M T DVRIDTRLNK +W
Sbjct: 14 RSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDVRIDTRLNKAVW 73
Query: 177 SKGINN 182
+KGI N
Sbjct: 74 AKGIRN 79
>sp|Q9GN74|RL31_AEDAE 60S ribosomal protein L31 OS=Aedes aegypti GN=RpL31 PE=2 SV=1
Length = 124
Score = 97.1 bits (240), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 56/63 (88%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
+NEVVTR+ TI++++RLHKVG+KKRAPRA+K+VR F +K+MGT DVRIDTRLNK +W +G
Sbjct: 14 INEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRG 73
Query: 180 INN 182
I N
Sbjct: 74 IRN 76
>sp|Q9URX6|RL31_SCHPO 60S ribosomal protein L31 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl31 PE=3 SV=1
Length = 113
Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/68 (64%), Positives = 54/68 (79%)
Query: 115 TKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKH 174
TKK +N+VVTRDYTIHMHKRL+ V FKKRAPRAIK + AF +K M T++VR+D LNK
Sbjct: 4 TKKSAINQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKE 63
Query: 175 IWSKGINN 182
+W +GI N
Sbjct: 64 VWKRGIRN 71
>sp|Q9XGL4|RL31_CYAPA 60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1
Length = 119
Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 112 KPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRL 171
K KK E+VTR+YTI++HKRLH VGFKKRAPRA+K ++ F K MGT DVR+D RL
Sbjct: 3 KAENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRL 62
Query: 172 NKHIWSKGINN 182
NK +W++GI +
Sbjct: 63 NKFVWNQGIRS 73
>sp|Q757D7|RL31_ASHGO 60S ribosomal protein L31 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL31 PE=3 SV=2
Length = 114
Score = 90.5 bits (223), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI++HKRLH V FKKRAPRA+K ++ F K MGTEDVR+D RLN IW +G
Sbjct: 4 LKDVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>sp|Q9U332|RL31_CAEEL 60S ribosomal protein L31 OS=Caenorhabditis elegans GN=rpl-31 PE=3
SV=1
Length = 122
Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 52/72 (72%)
Query: 111 KKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTR 170
K + +NEVVTR+YTIH+H R+ +G KKRAPRAI ++ F K QM T DVR+DT+
Sbjct: 4 KNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTK 63
Query: 171 LNKHIWSKGINN 182
LNK IWSKGI N
Sbjct: 64 LNKFIWSKGIKN 75
>sp|P51420|RL313_ARATH 60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2
SV=2
Length = 119
Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 114 ATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNK 173
+ KK EV+TR+YTI++H+RLHK FKK+AP+AIK +R F +K MGT+DVR+D +LNK
Sbjct: 2 SEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 61
Query: 174 HIWSKGI 180
IWSKGI
Sbjct: 62 QIWSKGI 68
>sp|Q9STR1|RL312_ARATH 60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=3
SV=1
Length = 119
Score = 90.1 bits (222), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 114 ATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNK 173
+ KK EVVTR+YTI++H+RLH FKK+AP+AIK +R F +K+MGT+DVR+D +LNK
Sbjct: 2 SEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNK 61
Query: 174 HIWSKGI 180
IWSKGI
Sbjct: 62 QIWSKGI 68
>sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1
Length = 121
Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 109 MVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
M K + +K EVV+R+YTI++HKRLH FKK+AP+AIK +R F +K MGT DVR+D
Sbjct: 1 MADKGSKPRK--EEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVD 58
Query: 169 TRLNKHIWSKGINN 182
+LNKHIWS+GI +
Sbjct: 59 VKLNKHIWSRGIRS 72
>sp|Q9MAV7|RL31_PANGI 60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1
Length = 121
Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 109 MVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
MV+K +K+ EVVTR+YTI++HKRLH FKK+AP AIK +R F +K MGT+DVR+D
Sbjct: 1 MVEKTKGRKE---EVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVD 57
Query: 169 TRLNKHIWSKGI 180
+LNK IWS+GI
Sbjct: 58 VKLNKQIWSRGI 69
>sp|P45841|RL31_CHLRE 60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31
PE=3 SV=1
Length = 116
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 114 ATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNK 173
A K E VTR+YTIH+ KRLHK FKK AP+A+K +R F K MGT DVR+D +LNK
Sbjct: 2 AKDKSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNK 61
Query: 174 HIWSKGINN 182
+WSKGI N
Sbjct: 62 AVWSKGIKN 70
>sp|P46290|RL31_NICGU 60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1
Length = 120
Score = 86.7 bits (213), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 122 EVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI 180
EVVTR+YTI++HKRLH FKK+AP AIK +R F +K MGT+DVR+D +LNK IWS+GI
Sbjct: 11 EVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGI 69
>sp|Q9SLL7|RL311_ARATH 60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=3
SV=1
Length = 119
Score = 86.7 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 122 EVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI 180
EVVTR+YTI++H+RLH FKK+AP AIK +R F K MGT+DVR+D +LNK IWSKGI
Sbjct: 10 EVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGI 68
>sp|O65071|RL31_PICMA 60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1
Length = 120
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 109 MVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
MV+K +++ NEV TR+YTI++H+RLH FKK AP+A+K +R F +K MGT DVR+D
Sbjct: 1 MVEKGKSRR---NEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLD 57
Query: 169 TRLNKHIWSKGINN 182
+LNK +WS+GI +
Sbjct: 58 VKLNKAVWSRGIRS 71
>sp|Q6FWF4|RL31_CANGA 60S ribosomal protein L31 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL31
PE=3 SV=1
Length = 113
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI+MHKRLH V FKKRAP+A+K ++ F K MGTEDVR+ LN+ IW +G
Sbjct: 4 LKDVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>sp|Q54XB5|RL31_DICDI 60S ribosomal protein L31 OS=Dictyostelium discoideum GN=rpl31 PE=3
SV=1
Length = 111
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 121 NEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI 180
+E VTR+YTI++HKRL+ FK RAP+A+K V+ F +K MGT+DVRID +LNK +WS+GI
Sbjct: 4 SEAVTREYTINLHKRLYGTTFKDRAPKAVKQVKLFAQKIMGTKDVRIDNKLNKFLWSQGI 63
Query: 181 NN 182
N
Sbjct: 64 KN 65
>sp|P0C2H9|RL31B_YEAST 60S ribosomal protein L31-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL31B PE=1 SV=1
Length = 113
Score = 84.3 bits (207), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI++HKRLH V FKKRAPRA+K ++ F K MGTEDVR+ LN+ IW +G
Sbjct: 4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>sp|P0C2H8|RL31A_YEAST 60S ribosomal protein L31-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL31A PE=1 SV=1
Length = 113
Score = 83.2 bits (204), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI++HKRLH V FKKRAPRA+K ++ F K MGT+DVR+ LN+ IW +G
Sbjct: 4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
++ G +WY ++A RA+NQA+GR IRH+ D+GAILL D RF++ + LS W++ + NT
Sbjct: 684 IISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNPRQKAQLSSWIQKHL-NT 742
Query: 673 SSHNTFMENLRNFVR--RRMEIQLEEERVKREEANLNEEEEVMDDTDRAS 720
+ H TF +R + R E L + ++ R A L E + D S
Sbjct: 743 AQHPTFGPIVRELSQFFRNAEKTLPQAKLTRSLAPLGPEPPIALVPDSTS 792
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 26/96 (27%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLL 296
Y I G+ V FP + Y Q M +VI+ + N +L
Sbjct: 4 YLINGIPVNFPFEPYQVQRDYM-----------------------ARVIECLQNSSNGVL 40
Query: 297 ESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT 332
ESPTG+GKTL+LLCS LAW +K VQ QRT
Sbjct: 41 ESPTGTGKTLSLLCSSLAWILHKKAQVQAS---QRT 73
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VI+ + N +LESPTG+GKTL+LLCS LAW +K VQ Q
Sbjct: 15 FEPYQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKKAQVQAS---Q 71
Query: 79 RTQDLQKTSFVF 90
RT + F F
Sbjct: 72 RTNVSELKEFEF 83
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDARFQDMSQVQQLSKWIRGHLGAR 731
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLE-EERVKRE--EANLNEEEEVMDDTDRASSSQ--- 723
+S + LR F + + + EERV + EE+ + ASSSQ
Sbjct: 732 PQSSPFGPIVRELRQFFKHAEQTMAQPEERVVEPLLQTVCKEEQPTL---ACASSSQITI 788
Query: 724 ---ESTGGTQSQNSTVMPQRWAYLSLLKKLSP 752
TGGT+ Q ++ + + + +K +P
Sbjct: 789 KREPGTGGTKFQLASELAAQAEMANTIKTWTP 820
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 23/89 (25%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q + M +V I N +LES
Sbjct: 6 IAGIPVHFPFEPYEVQRAYMEKV-----------------------IMCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKM 327
PTG+GKTL+LLC+ LAW R + QQ M
Sbjct: 43 PTGTGKTLSLLCASLAWIRTRQSEQQQYM 71
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKM 75
F Y + +VI N +LESPTG+GKTL+LLC+ LAW R + QQ M
Sbjct: 15 FEPYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEQQQYM 71
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY ++A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+RN +
Sbjct: 673 LLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDARFQDASQVQQLSKWIRNHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVR 687
+S + LR F +
Sbjct: 733 PQSSPFGPIVRELRQFFK 750
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 27/99 (27%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q + M +V I+ L+ N +LES
Sbjct: 6 IAGIPVHFPFEPYDVQRAYMEKV-----------------IICLR------DGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKM----FEQRTQ 333
PTG+GKTL+LLCS L W R + VQ M +Q+TQ
Sbjct: 43 PTGTGKTLSLLCSTLGWIRTRQSEVQLNMQKLQHDQQTQ 81
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VI N +LESPTG+GKTL+LLCS L W R + VQ M Q
Sbjct: 15 FEPYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGWIRTRQSEVQLNM--Q 72
Query: 79 RTQDLQKT 86
+ Q Q+T
Sbjct: 73 KLQHDQQT 80
>sp|Q22DH9|RL31_TETTS 60S ribosomal protein L31 OS=Tetrahymena thermophila (strain SB210)
GN=RPL31 PE=1 SV=1
Length = 111
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 44/56 (78%)
Query: 127 DYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGINN 182
D T+++HK+ HK+ FKK+APRAI+ + A KK MGT+DVRIDT LNK IWS GI N
Sbjct: 10 DTTVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRN 65
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR+D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDARFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLE-EERV 699
+S + LR F + + ++ +ERV
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEQTMVQPDERV 763
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 26/92 (28%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q + M +V I N +LES
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKV-----------------------IMCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQR---KEKELVQQKM 327
PTG+GKTL+LLCS LAW R E ++ QK+
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQINMQKL 74
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR---KEKELVQQKM 75
F Y + +VI N +LESPTG+GKTL+LLCS LAW R E ++ QK+
Sbjct: 15 FEPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQINMQKL 74
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR+D+GAILL D RF + Q LSKW+R +
Sbjct: 678 LLTGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLGAR 737
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLEEERVKREE 703
S + LR F R E +E+ + + +E
Sbjct: 738 PQCSPFGPIVRELRQFFRHAEET-MEQPKERTDE 770
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 23/89 (25%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q + M +V I+ L+ N +LES
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKV-----------------IICLR------DGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKM 327
PTG+GKTL+LLCS LAW R + Q+++
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEQQKQI 71
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKM 75
F Y + +VI N +LESPTG+GKTL+LLCS LAW R + Q+++
Sbjct: 15 FEPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEQQKQI 71
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLEEERVKREEANL 706
+S + LR F + E +++ V+ EE L
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEET-MKQPDVREEEQPL 768
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 23/91 (25%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q M +V I+ L+ N +LES
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKV-----------------IICLR------DGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
PTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 43 PTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
+VI N +LESPTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 27 KVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLEEERVKREEANL 706
+S + LR F + E +++ V+ EE L
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEET-MKQPDVREEEQPL 768
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 23/91 (25%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + Y Q M +V I+ L+ N +LES
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKV-----------------IICLR------DGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
PTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 43 PTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
+VI N +LESPTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 27 KVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
>sp|A4K436|RTEL1_BOVIN Regulator of telomere elongation helicase 1 OS=Bos taurus GN=RTEL1
PE=2 SV=1
Length = 1216
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
L G DWY+ QA RA+NQA+GR IRHR+D+GA+ L D RF +++ L WVR V+
Sbjct: 674 FLSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVY 733
Query: 673 SSHNTFMENLRNFVR 687
S + ++ F R
Sbjct: 734 DSFGHVIRDVAQFFR 748
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 238 TIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLE 297
T+ GV V+FP + Y Q M++V L+ +Q + N +LE
Sbjct: 5 TLKGVTVDFPFQPYKCQEEYMSKV--------------------LECLQ---EKVNGILE 41
Query: 298 SPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT 332
SPTG+GKTL LLCS LAW+ ++ V + +R
Sbjct: 42 SPTGTGKTLCLLCSTLAWREHLRDAVSARRIAERA 76
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT 80
N +LESPTG+GKTL LLCS LAW+ ++ V + +R
Sbjct: 37 NGILESPTGTGKTLCLLCSTLAWREHLRDAVSARRIAERA 76
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQN- 671
LL G +WY ++A RA+NQA+GR IRHR D+GAILL D RF Q LSKW+R + +
Sbjct: 672 LLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDSRFKDAAQVQQLSKWIRGHLGDR 731
Query: 672 --TSSHNTFMENLRNFVRRR---MEIQLEEERVKREEANLNEEEEVMDDTDRASSSQEST 726
S + LR F + M+ E E E + +E+E + + S
Sbjct: 732 PQCSPFGPIVRELRQFFKNAETTMKQPDERESGAPLETVIKKEDEPLAPISQIKREPGSN 791
Query: 727 GGTQSQNSTVM 737
++ N T +
Sbjct: 792 ATFKAANETAI 802
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 23/91 (25%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + YP Q + M +V IQ N +LES
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV-----------------------IQCLKDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
PTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQQQMIK 73
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y + +VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 15 FEPYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMIK 73
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQN- 671
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 672 --TSSHNTFMENLRNFVRR-RMEIQLEEER 698
S + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 23/97 (23%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + YP Q + M +V I N +LES
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV-----------------------IHCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDL 335
PTG+GKTL+LLCS LAW R + Q++M + D
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQKQMVKMEKADF 79
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VI N +LESPTG+GKTL+LLCS LAW R + Q++M +
Sbjct: 15 FEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVKM 74
Query: 79 RTQDL 83
D
Sbjct: 75 EKADF 79
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQN- 671
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 672 --TSSHNTFMENLRNFVRR-RMEIQLEEER 698
S + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 23/100 (23%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + YP Q + M +V IQ N +LES
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV-----------------------IQCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKI 338
PTG+GKTL+LLCS LAW R + QQ+M + D +
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKIEKADFSGL 82
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 15 FEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKI 74
Query: 79 RTQDL 83
D
Sbjct: 75 EKADF 79
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQN- 671
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 672 --TSSHNTFMENLRNFVRR-RMEIQLEEER 698
S + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 23/97 (23%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + YP Q + M +V IQ N +LES
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV-----------------------IQCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDL 335
PTG+GKTL+LLCS LAW R + QQ+M + D
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKMEKADF 79
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 15 FEPYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKM 74
Query: 79 RTQDL 83
D
Sbjct: 75 EKADF 79
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQN- 671
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 653 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 712
Query: 672 --TSSHNTFMENLRNFVRR-RMEIQLEEER 698
S + LR F + ++L +ER
Sbjct: 713 PQCSPFGPIVRELRQFFKNAEANMKLPDER 742
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 23/97 (23%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLES 298
I G+ V FP + YP Q + M +V I N +LES
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV-----------------------IHCLRDGTNGVLES 42
Query: 299 PTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDL 335
PTG+GKTL+LLCS LAW R + Q +M + D
Sbjct: 43 PTGTGKTLSLLCSSLAWIRTRQSEHQMQMVKMEKADF 79
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y + +VI N +LESPTG+GKTL+LLCS LAW R + Q +M +
Sbjct: 15 FEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQMQMVKM 74
Query: 79 RTQDL 83
D
Sbjct: 75 EKADF 79
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
L+ G DWY ++A RA+NQA+GR IRH+ D+GAILL D RF + Q LS W+ + ++ +
Sbjct: 675 LITGNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQNARQQAQLSAWIHSHLRES 734
Query: 673 SS---HNTFMENLRNFVRRRMEIQLEEE-----RVKREEANLNEEE 710
S+ T + + F R L VK E A +EE
Sbjct: 735 SAVPNFGTVVGEMSRFFRHMSTASLPARVRDVCAVKDEPAEAAKEE 780
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 23/79 (29%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLL 296
Y I G+ V FP + Y Q + M +VI+ N +L
Sbjct: 4 YMINGIPVNFPFEPYELQKNYM-----------------------AKVIECLQNKTNGVL 40
Query: 297 ESPTGSGKTLALLCSVLAW 315
ESPTG+GKTL+LLCS +AW
Sbjct: 41 ESPTGTGKTLSLLCSSMAW 59
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAW 63
F Y K +VI+ N +LESPTG+GKTL+LLCS +AW
Sbjct: 15 FEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAW 59
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1
PE=3 SV=1
Length = 1177
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WY+ QA RA+NQA+GR IRHR D+GAI L D RF S +++ L WVR V+
Sbjct: 676 LTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSADARNQLPSWVRPYVKIYD 735
Query: 674 SHNTFMENLRNFVR 687
T + ++ F R
Sbjct: 736 GFGTMVRDVAQFFR 749
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 241 GVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLESPT 300
G+ V+FP YP Q M++V I+ K N +LESPT
Sbjct: 8 GINVDFPFTPYPCQEDYMSKV-----------------------IECLQKKVNGVLESPT 44
Query: 301 GSGKTLALLCSVLAWQRKEKELVQQKMFEQR 331
G+GKTL LLCS LAW+ K+ + + +R
Sbjct: 45 GTGKTLCLLCSTLAWRDHFKDTISARKITER 75
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQR 79
+VI+ K N +LESPTG+GKTL LLCS LAW+ K+ + + +R
Sbjct: 27 KVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRDHFKDTISARKITER 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,777,077
Number of Sequences: 539616
Number of extensions: 11543233
Number of successful extensions: 43296
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 42939
Number of HSP's gapped (non-prelim): 418
length of query: 795
length of database: 191,569,459
effective HSP length: 126
effective length of query: 669
effective length of database: 123,577,843
effective search space: 82673576967
effective search space used: 82673576967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)