Your job contains 1 sequence.
>psy3462
MTKKSSDIFKTYLNEPNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSV
LAWQRKEKELVQQKMFEQRTQDLQKTSFVFCGRSDFFLLFRERRISDTMVKKPATKKKPL
NEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI
NNHTLGTAYFDSAAKCHKEMRYRNRVVKLTGFDQLIGESAVLPSVKDKLKPSAATSYTIG
GVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLESPT
GSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNNGME
QQLLTCITTINQQEDELRQSTKKTRVDKLKVLNGRSKNLVSSIDFILGLLYKGIQTCITT
INQQEDELRQSTKKTKVDKLKVLNGRSKNLVSSIDFILGLLYKGVNCEDYHVCMESSVAF
DQLIQLDLMLDEHLNPYVLKVKDTPCIEDLEQFSTRALVSPCFQLIQLDLMLDEHLNPYV
LKVKDTPCIEDLVLKRNIFYDTLMLCDVQTKETKHRDSVKQVMGKGNLELCKGVFWTRFP
NTCQYSVVYPTGLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQG
LSKWVRNQVQNTSSHNTFMENLRNFVRRRMEIQLEEERVKREEANLNEEEEVMDDTDRAS
SSQESTGGTQSQNSTVMPQRWAYLSLLKKLSPLAPTWGPPLKIQSVPQVIFHKPCDNKSI
FKLISIKYMLIRDSQ
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3462
(795 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J3QSE8 - symbol:BRIP1 "Fanconi anemia group J p... 253 8.3e-27 2
UNIPROTKB|J9NVZ8 - symbol:BRIP1 "Uncharacterized protein"... 256 8.7e-27 2
UNIPROTKB|E2RHN5 - symbol:BRIP1 "Uncharacterized protein"... 256 9.3e-27 2
MGI|MGI:2442836 - symbol:Brip1 "BRCA1 interacting protein... 254 1.0e-26 2
UNIPROTKB|E1C1X9 - symbol:BRIP1 "Fanconi anemia group J p... 246 1.3e-26 2
UNIPROTKB|Q3YK19 - symbol:BRIP1 "Fanconi anemia group J p... 246 1.3e-26 2
UNIPROTKB|Q9BX63 - symbol:BRIP1 "Fanconi anemia group J p... 253 1.6e-26 2
ZFIN|ZDB-GENE-081107-11 - symbol:brip1 "BRCA1 interacting... 237 1.2e-25 2
RGD|1307659 - symbol:Brip1 "BRCA1 interacting protein C-t... 247 2.0e-25 3
DICTYBASE|DDB_G0286621 - symbol:fncJ "DEAD/DEAH box helic... 226 3.8e-25 3
UNIPROTKB|D4ACW5 - symbol:Brip1 "Protein Brip1" species:1... 247 1.0e-24 3
UNIPROTKB|J9P3J8 - symbol:LOC607833 "Uncharacterized prot... 264 9.0e-22 1
UNIPROTKB|F1P4V6 - symbol:RPL31 "Uncharacterized protein"... 260 2.4e-21 1
UNIPROTKB|Q56JX3 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
UNIPROTKB|E2R8G3 - symbol:LOC607833 "Uncharacterized prot... 259 3.1e-21 1
UNIPROTKB|J9NYL5 - symbol:LOC608123 "Uncharacterized prot... 259 3.1e-21 1
UNIPROTKB|J9PA41 - symbol:LOC100855789 "Uncharacterized p... 259 3.1e-21 1
UNIPROTKB|B7Z4C8 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
UNIPROTKB|B7Z4E3 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
UNIPROTKB|C9JU56 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
UNIPROTKB|P62899 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
UNIPROTKB|P62901 - symbol:RPL31 "60S ribosomal protein L3... 259 3.1e-21 1
RGD|2319106 - symbol:Rpl31l4 "ribosomal protein L31-like ... 259 3.1e-21 1
RGD|621202 - symbol:Rpl31 "ribosomal protein L31" species... 259 3.1e-21 1
FB|FBgn0025286 - symbol:RpL31 "Ribosomal protein L31" spe... 258 4.0e-21 1
TAIR|locus:2030497 - symbol:AT1G20720 species:3702 "Arabi... 208 4.4e-21 3
UNIPROTKB|J9NS00 - symbol:J9NS00 "Uncharacterized protein... 244 4.8e-21 2
RGD|6500827 - symbol:LOC100910017 "60S ribosomal protein ... 256 6.5e-21 1
UNIPROTKB|J9NZY0 - symbol:J9NZY0 "Uncharacterized protein... 255 8.4e-21 1
RGD|2323059 - symbol:LOC100359986 "ribosomal protein L31-... 255 8.4e-21 1
UNIPROTKB|J9NTH4 - symbol:J9NTH4 "Uncharacterized protein... 254 1.1e-20 1
UNIPROTKB|J9P080 - symbol:J9P080 "Uncharacterized protein... 254 1.1e-20 1
UNIPROTKB|J9P252 - symbol:J9P252 "Uncharacterized protein... 253 1.4e-20 1
UNIPROTKB|B8ZZK4 - symbol:RPL31 "60S ribosomal protein L3... 253 1.4e-20 1
WB|WBGene00001049 - symbol:dog-1 species:6239 "Caenorhabd... 215 1.7e-20 2
UNIPROTKB|H7C2W9 - symbol:RPL31 "60S ribosomal protein L3... 252 1.8e-20 1
RGD|1565894 - symbol:RGD1565894 "similar to ribosomal pro... 252 1.8e-20 1
RGD|1562547 - symbol:Rpl31l3 "ribosomal protein L31-like ... 251 2.2e-20 1
UNIPROTKB|J9P9X7 - symbol:RPL31 "Uncharacterized protein"... 249 3.7e-20 1
ZFIN|ZDB-GENE-060331-121 - symbol:rpl31 "ribosomal protei... 247 6.0e-20 1
UNIPROTKB|J9P8A1 - symbol:J9P8A1 "Uncharacterized protein... 246 7.7e-20 1
RGD|1596752 - symbol:LOC681338 "similar to ribosomal prot... 246 7.7e-20 1
UNIPROTKB|J9PBI6 - symbol:J9PBI6 "Uncharacterized protein... 244 1.3e-19 1
RGD|2321629 - symbol:LOC100364129 "ribosomal protein L31-... 244 1.3e-19 1
UNIPROTKB|F1PC48 - symbol:F1PC48 "Uncharacterized protein... 242 2.1e-19 1
UNIPROTKB|J9P560 - symbol:J9P560 "Uncharacterized protein... 242 2.1e-19 1
POMBASE|SPAC890.08 - symbol:rpl31 "60S ribosomal protein ... 241 2.7e-19 1
RGD|1561841 - symbol:RGD1561841 "similar to ribosomal pro... 241 2.7e-19 1
RGD|1564839 - symbol:RGD1564839 "similar to ribosomal pro... 241 2.7e-19 1
UNIPROTKB|J9P389 - symbol:J9P389 "Uncharacterized protein... 240 3.4e-19 1
UNIPROTKB|J9P618 - symbol:J9P618 "Uncharacterized protein... 240 3.4e-19 1
RGD|1592945 - symbol:LOC680384 "similar to ribosomal prot... 239 4.4e-19 1
RGD|1563551 - symbol:RGD1563551 "similar to ribosomal pro... 238 5.6e-19 1
RGD|1597308 - symbol:LOC690384 "similar to ribosomal prot... 238 5.6e-19 1
UNIPROTKB|J9NUD9 - symbol:J9NUD9 "Uncharacterized protein... 236 9.2e-19 1
UNIPROTKB|F1SH66 - symbol:LOC100625352 "Uncharacterized p... 235 1.2e-18 1
RGD|1562808 - symbol:RGD1562808 "similar to ribosomal pro... 235 1.2e-18 1
RGD|1561195 - symbol:RGD1561195 "similar to ribosomal pro... 232 2.5e-18 1
UNIPROTKB|J9PAK4 - symbol:J9PAK4 "Uncharacterized protein... 231 3.2e-18 1
UNIPROTKB|J9NSI9 - symbol:J9NSI9 "Uncharacterized protein... 229 5.2e-18 1
UNIPROTKB|J9JHT8 - symbol:J9JHT8 "Uncharacterized protein... 228 6.6e-18 1
TAIR|locus:2165051 - symbol:AT5G56710 species:3702 "Arabi... 228 6.6e-18 1
TAIR|locus:2136809 - symbol:AT4G26230 species:3702 "Arabi... 227 8.5e-18 1
WB|WBGene00004445 - symbol:rpl-31 species:6239 "Caenorhab... 226 1.1e-17 1
UNIPROTKB|G3MX45 - symbol:G3MX45 "Uncharacterized protein... 225 1.4e-17 1
UNIPROTKB|F1SRB7 - symbol:RPL31 "60S ribosomal protein L3... 224 1.8e-17 1
UNIPROTKB|Q16X92 - symbol:AAEL008960 "Regulator of telome... 182 2.2e-17 3
UNIPROTKB|J9P5Y4 - symbol:J9P5Y4 "Uncharacterized protein... 223 2.3e-17 1
UNIPROTKB|J9P8F8 - symbol:J9P8F8 "Uncharacterized protein... 223 2.3e-17 1
UNIPROTKB|B0W9F4 - symbol:CPIJ003765 "Regulator of telome... 182 2.6e-17 4
UNIPROTKB|B4PZB4 - symbol:GE16425 "Regulator of telomere ... 182 2.7e-17 4
UNIPROTKB|B4M891 - symbol:GJ16649 "Regulator of telomere ... 185 3.3e-17 3
RGD|1562055 - symbol:RGD1562055 "similar to ribosomal pro... 221 3.7e-17 1
UNIPROTKB|B4I0K4 - symbol:GM12432 "Regulator of telomere ... 182 4.7e-17 3
UNIPROTKB|J9NZ04 - symbol:LOC489638 "Uncharacterized prot... 220 4.8e-17 1
UNIPROTKB|F1SLI2 - symbol:F1SLI2 "Uncharacterized protein... 220 4.8e-17 1
UNIPROTKB|B3NSW1 - symbol:GG18780 "Regulator of telomere ... 182 5.3e-17 4
UNIPROTKB|B3MSG8 - symbol:GF20802 "Regulator of telomere ... 176 7.2e-17 3
UNIPROTKB|B4L1Z2 - symbol:GI15901 "Regulator of telomere ... 188 1.1e-16 2
UNIPROTKB|B4JNS2 - symbol:GH24089 "Regulator of telomere ... 186 1.2e-16 3
TAIR|locus:2052000 - symbol:AT2G19740 species:3702 "Arabi... 215 1.6e-16 1
UNIPROTKB|J9NZC0 - symbol:J9NZC0 "Uncharacterized protein... 214 2.1e-16 1
UNIPROTKB|B4NDG5 - symbol:GK24923 "Regulator of telomere ... 186 2.1e-16 2
FB|FBgn0029798 - symbol:CG4078 species:7227 "Drosophila m... 182 2.1e-16 4
UNIPROTKB|G3N0I3 - symbol:BRIP1 "Uncharacterized protein"... 248 2.5e-16 2
RGD|1596734 - symbol:LOC681356 "similar to ribosomal prot... 212 3.4e-16 1
UNIPROTKB|F1LVW2 - symbol:F1LVW2 "Uncharacterized protein... 212 3.4e-16 1
ASPGD|ASPL0000026338 - symbol:AN10681 species:162425 "Eme... 211 4.4e-16 1
UNIPROTKB|E1BNG9 - symbol:BRIP1 "Uncharacterized protein"... 248 8.2e-16 2
UNIPROTKB|E1BTS7 - symbol:Gga.49055 "Uncharacterized prot... 158 8.7e-16 2
UNIPROTKB|E2RLA6 - symbol:RTEL1 "Uncharacterized protein"... 171 8.7e-16 3
UNIPROTKB|E1BTS6 - symbol:Gga.49055 "Uncharacterized prot... 158 9.4e-16 2
UNIPROTKB|F1NE49 - symbol:Gga.49055 "Uncharacterized prot... 158 9.5e-16 2
SGD|S000004398 - symbol:RPL31B "Ribosomal 60S subunit pro... 207 1.2e-15 1
UNIPROTKB|F1MMS0 - symbol:BRIP1 "Uncharacterized protein"... 248 1.2e-15 2
UNIPROTKB|Q6H1L8 - symbol:Rtel1 "Regulator of telomere el... 162 1.4e-15 3
MGI|MGI:2139369 - symbol:Rtel1 "regulator of telomere elo... 161 1.4e-15 3
ZFIN|ZDB-GENE-050306-11 - symbol:rtel1 "regulator of telo... 169 1.5e-15 3
DICTYBASE|DDB_G0279061 - symbol:rpl31 "S60 ribosomal prot... 205 1.9e-15 1
UNIPROTKB|J9NXZ0 - symbol:J9NXZ0 "Uncharacterized protein... 204 2.5e-15 1
WARNING: Descriptions of 54 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|J3QSE8 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
ProteinModelPortal:J3QSE8 Ensembl:ENST00000577598 Uniprot:J3QSE8
Length = 994
Score = 253 (94.1 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 47/83 (56%), Positives = 62/83 (74%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + S+ GLSKWVR Q+
Sbjct: 809 GLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQI 868
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 869 QHHSTFESALESLAEFSKKHQKV 891
Score = 137 (53.3 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ + K ++
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS----LSGKPADEGVS 77
Query: 334 DLQKIPFRKLKISRLKAKDFSTNNGMEQ 361
+ ++ +KDF TNN M Q
Sbjct: 78 EKAEVQLSCC--CACHSKDF-TNNDMNQ 102
Score = 134 (52.2 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ + ++ +
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSLSGKPADEGVSEKAE 81
Query: 82 DLQKTSFVFCGRSDF 96
+Q + C DF
Sbjct: 82 -VQLSCCCACHSKDF 95
Score = 108 (43.1 bits), Expect = 6.8e-23, Sum P(3) = 6.8e-23
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 235 TSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+ YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 6 SEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCL 43
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 307 ALLCSVLAWQRKEKELVQQKMFE 329
A+ CS++ W E + ++ +E
Sbjct: 440 AVCCSLINWLEANAEYLVERDYE 462
Score = 37 (18.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 ALLCSVLAWQRKEKELVQQKMFE 77
A+ CS++ W E + ++ +E
Sbjct: 440 AVCCSLINWLEANAEYLVERDYE 462
>UNIPROTKB|J9NVZ8 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AAEX03006594 EMBL:AAEX03006595
EMBL:AAEX03006596 Ensembl:ENSCAFT00000045493 Uniprot:J9NVZ8
Length = 1214
Score = 256 (95.2 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 47/83 (56%), Positives = 63/83 (75%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF S S+ GLSKW+R Q+
Sbjct: 808 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWIRQQI 867
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L +F R+ ++
Sbjct: 868 QHHSTFESALESLSDFSRKHQKV 890
Score = 136 (52.9 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEK-ELVQQKM 75
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ +LV + +
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQQSVSGKLVDESL 76
Score = 136 (52.9 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEK-ELVQQKM 327
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ +LV + +
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQQSVSGKLVDESL 76
Score = 109 (43.4 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 235 TSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+ YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 6 SEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCL 43
>UNIPROTKB|E2RHN5 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:GVHKISD EMBL:AAEX03006594
EMBL:AAEX03006595 EMBL:AAEX03006596 Ensembl:ENSCAFT00000028135
Uniprot:E2RHN5
Length = 1244
Score = 256 (95.2 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 47/83 (56%), Positives = 63/83 (75%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF S S+ GLSKW+R Q+
Sbjct: 809 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWIRQQI 868
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L +F R+ ++
Sbjct: 869 QHHSTFESALESLSDFSRKHQKV 891
Score = 136 (52.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEK-ELVQQKM 75
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ +LV + +
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQQSVSGKLVDESL 76
Score = 136 (52.9 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEK-ELVQQKM 327
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ +LV + +
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSTLAWQQSVSGKLVDESL 76
Score = 109 (43.4 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 235 TSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+ YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 6 SEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCL 43
>MGI|MGI:2442836 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2442836
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006357
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
CleanEx:MM_BACH1 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AL592465
EMBL:AL592065 EMBL:AL645690 EMBL:BC094252 EMBL:AK051878
EMBL:AK080771 IPI:IPI00319607 RefSeq:NP_840094.1 UniGene:Mm.186143
ProteinModelPortal:Q5SXJ3 SMR:Q5SXJ3 STRING:Q5SXJ3
PhosphoSite:Q5SXJ3 PRIDE:Q5SXJ3 Ensembl:ENSMUST00000044423
GeneID:237911 KEGG:mmu:237911 UCSC:uc007ksf.2 InParanoid:Q5SXJ3
OMA:GVHKISD ChiTaRS:BRIP1 NextBio:383570 Bgee:Q5SXJ3
CleanEx:MM_BRIP1 Genevestigator:Q5SXJ3
GermOnline:ENSMUSG00000034329 Uniprot:Q5SXJ3
Length = 1174
Score = 254 (94.5 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 48/83 (57%), Positives = 62/83 (74%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF + ++ GLSKWVR Q+
Sbjct: 812 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPNRYISGLSKWVRQQI 871
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ SS + +E+L F RR ++
Sbjct: 872 QHHSSFASALESLTEFSRRHQKV 894
Score = 137 (53.3 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 69
+++G N +++CLLESPTGSGK+LALLCS LAWQ+ E
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSE 69
Score = 137 (53.3 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 284 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 321
+++G N +++CLLESPTGSGK+LALLCS LAWQ+ E
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSE 69
Score = 107 (42.7 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
S + YTIGGVK+ FP +AYP+Q++MMN + H L
Sbjct: 3 SVLSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCL 43
>UNIPROTKB|E1C1X9 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:AADN02025783
IPI:IPI00820128 Ensembl:ENSGALT00000008466 ArrayExpress:E1C1X9
Uniprot:E1C1X9
Length = 1249
Score = 246 (91.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQ--GLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + ++ GLSKW+R QV
Sbjct: 819 GLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQV 878
Query: 670 QNTSSHNTFMENLRNFVRRRME 691
Q+ + + +E+L F R +
Sbjct: 879 QHHENFGSALESLHAFAERNQK 900
Score = 145 (56.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 284 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQQKMFEQRTQDLQKIPFR 341
+++G N ++CLLESPTGSGK+LALLCS L+WQ+ EK L++ ++ + +P R
Sbjct: 32 IVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLKSSCEKEDREPAASLPCR 91
Query: 342 KLKISRLKAKD 352
+ SR ++ +
Sbjct: 92 CVCHSRSESSE 102
Score = 135 (52.6 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQ 72
+++G N ++CLLESPTGSGK+LALLCS L+WQ+ EK L++
Sbjct: 32 IVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLK 74
Score = 108 (43.1 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
S + YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 3 SDVSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQHCL 43
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 110 VKKPATKKKPLNEVVTRDYT-IH 131
+K+ A P+ + +RDYT IH
Sbjct: 272 LKRTAYSGVPMTILSSRDYTCIH 294
>UNIPROTKB|Q3YK19 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0051539 GO:GO:0004003
Reactome:REACT_115612 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DQ109581 IPI:IPI00593256
RefSeq:NP_001028230.1 UniGene:Gga.17801 ProteinModelPortal:Q3YK19
STRING:Q3YK19 Ensembl:ENSGALT00000039225 GeneID:417642
KEGG:gga:417642 CTD:83990 HOGENOM:HOG000068083 HOVERGEN:HBG081519
InParanoid:Q3YK19 KO:K15362 OMA:GYETSCK OrthoDB:EOG4J6RQ8
NextBio:20820915 ArrayExpress:Q3YK19 Uniprot:Q3YK19
Length = 1252
Score = 246 (91.7 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQ--GLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + ++ GLSKW+R QV
Sbjct: 819 GLLPGSQWYEIQAYRALNQALGRCIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQV 878
Query: 670 QNTSSHNTFMENLRNFVRRRME 691
Q+ + + +E+L F R +
Sbjct: 879 QHHENFGSALESLHAFAERNQK 900
Score = 145 (56.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 284 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQQKMFEQRTQDLQKIPFR 341
+++G N ++CLLESPTGSGK+LALLCS L+WQ+ EK L++ ++ + +P R
Sbjct: 32 IVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLKSSCEKEDREPAASLPCR 91
Query: 342 KLKISRLKAKD 352
+ SR ++ +
Sbjct: 92 CVCHSRSESSE 102
Score = 135 (52.6 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK--EKELVQ 72
+++G N ++CLLESPTGSGK+LALLCS L+WQ+ EK L++
Sbjct: 32 IVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQSLYEKSLLK 74
Score = 108 (43.1 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
S + YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 3 SDVSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNRQHCL 43
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 110 VKKPATKKKPLNEVVTRDYT-IH 131
+K+ A P+ + +RDYT IH
Sbjct: 272 LKRTAYSGVPMTILSSRDYTCIH 294
>UNIPROTKB|Q9BX63 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000077 "DNA damage checkpoint"
evidence=NAS] [GO:0006302 "double-strand break repair"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0000077 GO:GO:0046872 GO:GO:0003677 GO:GO:0031965
GO:GO:0006357 GO:GO:0051539 GO:GO:0004003 GO:GO:0006302 MIM:114480
InterPro:IPR014001 SMART:SM00487 CleanEx:HS_BACH1 Orphanet:145
PDB:1T29 PDBsum:1T29 MIM:227650 Orphanet:84 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AF360549
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 EMBL:BC101472
EMBL:BC101474 EMBL:AK074713 IPI:IPI00012500 IPI:IPI00514398
RefSeq:NP_114432.2 UniGene:Hs.128903 PDB:3AL3 PDBsum:3AL3
ProteinModelPortal:Q9BX63 SMR:Q9BX63 DIP:DIP-41787N IntAct:Q9BX63
MINT:MINT-275883 STRING:Q9BX63 PhosphoSite:Q9BX63 DMDM:57012613
PaxDb:Q9BX63 PRIDE:Q9BX63 DNASU:83990 Ensembl:ENST00000259008
GeneID:83990 KEGG:hsa:83990 UCSC:uc002izk.2 GeneCards:GC17M059759
H-InvDB:HIX0202529 HGNC:HGNC:20473 HPA:HPA005474 MIM:605882
MIM:609054 neXtProt:NX_Q9BX63 PharmGKB:PA134906421
InParanoid:Q9BX63 EvolutionaryTrace:Q9BX63 GenomeRNAi:83990
NextBio:73148 ArrayExpress:Q9BX63 Bgee:Q9BX63 CleanEx:HS_BRIP1
Genevestigator:Q9BX63 GermOnline:ENSG00000136492 Uniprot:Q9BX63
Length = 1249
Score = 253 (94.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 47/83 (56%), Positives = 62/83 (74%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + S+ GLSKWVR Q+
Sbjct: 809 GLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQI 868
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 869 QHHSTFESALESLAEFSKKHQKV 891
Score = 137 (53.3 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ + K ++
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQS----LSGKPADEGVS 77
Query: 334 DLQKIPFRKLKISRLKAKDFSTNNGMEQ 361
+ ++ +KDF TNN M Q
Sbjct: 78 EKAEVQLSCC--CACHSKDF-TNNDMNQ 102
Score = 134 (52.2 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+ + ++ +
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSLSGKPADEGVSEKAE 81
Query: 82 DLQKTSFVFCGRSDF 96
+Q + C DF
Sbjct: 82 -VQLSCCCACHSKDF 95
Score = 108 (43.1 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 235 TSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+ YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 6 SEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCL 43
Score = 37 (18.1 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 307 ALLCSVLAWQRKEKELVQQKMFE 329
A+ CS++ W E + ++ +E
Sbjct: 440 AVCCSLINWLEANAEYLVERDYE 462
Score = 37 (18.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 ALLCSVLAWQRKEKELVQQKMFE 77
A+ CS++ W E + ++ +E
Sbjct: 440 AVCCSLINWLEANAEYLVERDYE 462
>ZFIN|ZDB-GENE-081107-11 [details] [associations]
symbol:brip1 "BRCA1 interacting protein C-terminal
helicase 1" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-081107-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:EF088194
IPI:IPI00877443 RefSeq:NP_001103766.1 UniGene:Dr.85128
ProteinModelPortal:A8QLH7 STRING:A8QLH7 GeneID:794038
KEGG:dre:794038 NextBio:20931680 ArrayExpress:A8QLH7 Uniprot:A8QLH7
Length = 1217
Score = 237 (88.5 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 48/89 (53%), Positives = 64/89 (71%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQ--GLSKWVRNQV 669
GLL GG WY+IQAYRALNQALGRCIRHR DWGA++LVD RF + ++ GLSKWVR V
Sbjct: 842 GLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQLV 901
Query: 670 QNTSSHNTFMENLRNFVR-RRMEIQLEEE 697
++ + M++L +F + +R ++ EE
Sbjct: 902 RHHDTFTGAMQSLESFSQGQRGAVETFEE 930
Score = 145 (56.1 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 45/134 (33%), Positives = 65/134 (48%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKE--KELVQQKMFEQR 331
Y S + +I+G N ++CLLESPTGSGK+LALLCS LAWQ+ + KE F
Sbjct: 22 YPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAWQQAQFVKEQDAGTGFADC 81
Query: 332 TQDLQKIPFRKLKISRLKAKDFSTNNGMEQQL-LTCITTINQQEDELRQSTKKTRVDKLK 390
+ P + SR F+T + LTC T Q L + K + K
Sbjct: 82 KKSGVVTPCQCACHSRNAQSTFNTRASKPPTVHLTCEGTSAQPTTPLSKGGKSDQHKKPS 141
Query: 391 VLNGRSKNLVSSID 404
+ + S+ L +S++
Sbjct: 142 LSSRLSEKLQASLN 155
Score = 137 (53.3 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKE 67
Y S + +I+G N ++CLLESPTGSGK+LALLCS LAWQ+ +
Sbjct: 22 YPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAWQQAQ 67
Score = 110 (43.8 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 233 AAT--SYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
AAT YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 2 AATPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCL 43
Score = 40 (19.1 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 349 KAKDFSTNNGMEQQLLTCITTINQ 372
K +D TN G+ +L C T I +
Sbjct: 732 KLRDRWTNTGLWDKLEECKTVITE 755
>RGD|1307659 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=ISO]
[GO:0071295 "cellular response to vitamin" evidence=IEP]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781914 Ensembl:ENSRNOT00000055817 ArrayExpress:D4AD12
GO:GO:0071295 Uniprot:D4AD12
Length = 818
Score = 247 (92.0 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF + + GLSKWVR Q+
Sbjct: 732 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYISGLSKWVRQQI 791
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F +R ++
Sbjct: 792 QHHSTFASALESLTEFSKRHQKV 814
Score = 135 (52.6 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
+++G N +++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 135 (52.6 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 284 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 317
+++G N +++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 107 (42.7 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
S + YTIGGVK+ FP +AYP+Q++MMN + H L
Sbjct: 3 SVLSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCL 43
Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 5/46 (10%), Positives = 26/46 (56%)
Query: 367 ITTINQQEDELRQSTKKTRVDKLKVLNGRSKNLVSSIDFILGLLYK 412
++ + Q+E+++ + K ++ +++ ++ ++ + +L L++
Sbjct: 417 LSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFR 462
>DICTYBASE|DDB_G0286621 [details] [associations]
symbol:fncJ "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 dictyBase:DDB_G0286621 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0003677
EMBL:AAFI02000089 GO:GO:0004003 GO:GO:0006302 InterPro:IPR014001
SMART:SM00487 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K15362
RefSeq:XP_637574.1 ProteinModelPortal:Q54LI7
EnsemblProtists:DDB0232367 GeneID:8625714 KEGG:ddi:DDB_G0286621
InParanoid:Q54LI7 Uniprot:Q54LI7
Length = 1078
Score = 226 (84.6 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 39/72 (54%), Positives = 55/72 (76%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
+ GGDWY++QAYRALNQALGRCIRH+ D+G+ILL+D+RF + LSKW R+ ++N
Sbjct: 1000 ISGGDWYKLQAYRALNQALGRCIRHKNDYGSILLIDERFTQMGNWNSLSKWTRSCIKNNR 1059
Query: 674 SHNTFMENLRNF 685
+ NT + +L+ F
Sbjct: 1060 NLNTSLSSLKLF 1071
Score = 154 (59.3 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 36/104 (34%), Positives = 59/104 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 330
F Y+ + ++++G + +NC+LESPTG+GKTL+LLCS LAWQ + K+ Q+ + E+
Sbjct: 202 FKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLLCSSLAWQEENKKKNQRDLEEK 261
Query: 331 RTQDL---QKIPFRKLKISRLKAKDFSTNNGMEQQLLTCITTIN 371
R L Q++ +K I A ++N +T +T N
Sbjct: 262 RKLALDSKQRMIEKKQLIDAAAAASAASNTTSNLPSITSTSTSN 305
Score = 146 (56.5 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 19 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ 78
F Y+ + ++++G + +NC+LESPTG+GKTL+LLCS LAWQ + K+ Q+ + E+
Sbjct: 202 FKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLLCSSLAWQEENKKKNQRDLEEK 261
Query: 79 R 79
R
Sbjct: 262 R 262
Score = 69 (29.3 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQV 261
Y IG KV+FP K Y Q SMM+++
Sbjct: 191 YKIGNYKVKFPFKPYACQASMMSRI 215
Score = 43 (20.2 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 545 DTPCIEDLVLKRNIFYDTLMLCD-VQTKETKHRDSVKQVMGKGNL--ELCKG 593
+T ++ + K+ FY+ + ++T + +R+ +KQ KG + +C+G
Sbjct: 905 ETGILKKINAKKRYFYEPKNQREFIETLDN-YREEIKQRPNKGAILFAVCRG 955
Score = 42 (19.8 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 292 KNCLLESPTGS----GKTLA------LLCSVLAWQRKEKELVQQKMFEQRTQDLQK 337
K+C++ S T S K LA LL S++AW K+ + ++ FE+ Q++ K
Sbjct: 604 KDCIMNSRTMSMLSNEKALAIHYCYKLLESIIAWINKKVQTLKPIDFEKH-QNVWK 658
Score = 42 (19.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 40 KNCLLESPTGS----GKTLA------LLCSVLAWQRKEKELVQQKMFEQRTQDLQK 85
K+C++ S T S K LA LL S++AW K+ + ++ FE+ Q++ K
Sbjct: 604 KDCIMNSRTMSMLSNEKALAIHYCYKLLESIIAWINKKVQTLKPIDFEKH-QNVWK 658
>UNIPROTKB|D4ACW5 [details] [associations]
symbol:Brip1 "Protein Brip1" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 TIGRFAMs:TIGR00604 OrthoDB:EOG4J6RQ8 IPI:IPI00372668
Ensembl:ENSRNOT00000038829 ArrayExpress:D4ACW5 Uniprot:D4ACW5
Length = 1170
Score = 247 (92.0 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF + + GLSKWVR Q+
Sbjct: 810 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFNNNPDRYISGLSKWVRQQI 869
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F +R ++
Sbjct: 870 QHHSTFASALESLTEFSKRHQKV 892
Score = 135 (52.6 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 32 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
+++G N +++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 135 (52.6 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 23/34 (67%), Positives = 31/34 (91%)
Query: 284 VIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 317
+++G N +++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 32 IVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 107 (42.7 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
S + YTIGGVK+ FP +AYP+Q++MMN + H L
Sbjct: 3 SVLSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCL 43
Score = 37 (18.1 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 5/46 (10%), Positives = 26/46 (56%)
Query: 367 ITTINQQEDELRQSTKKTRVDKLKVLNGRSKNLVSSIDFILGLLYK 412
++ + Q+E+++ + K ++ +++ ++ ++ + +L L++
Sbjct: 495 LSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFR 540
>UNIPROTKB|J9P3J8 [details] [associations]
symbol:LOC607833 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 OMA:ILRRMAN
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:AAEX03026547
Ensembl:ENSCAFT00000027302 Uniprot:J9P3J8
Length = 128
Score = 264 (98.0 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 109 MVKKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDV 165
M KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DV
Sbjct: 6 MAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 65
Query: 166 RIDTRLNKHIWSKGINN 182
RIDTRLNK +W+KGI N
Sbjct: 66 RIDTRLNKAVWAKGIRN 82
>UNIPROTKB|F1P4V6 [details] [associations]
symbol:RPL31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 OMA:TNDVRID
EMBL:AADN02017717 IPI:IPI00583613 Ensembl:ENSGALT00000027081
Uniprot:F1P4V6
Length = 126
Score = 260 (96.6 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK + KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 6 KKGSEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 65
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 66 DTRLNKAVWAKGIRN 80
>UNIPROTKB|Q56JX3 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02910 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OMA:TNDVRID EMBL:AY911357 EMBL:BC102125 IPI:IPI00689092
RefSeq:NP_001020512.1 UniGene:Bt.1601 ProteinModelPortal:Q56JX3
SMR:Q56JX3 STRING:Q56JX3 PRIDE:Q56JX3 Ensembl:ENSBTAT00000026259
GeneID:534279 KEGG:bta:534279 CTD:6160 HOVERGEN:HBG001549
InParanoid:Q56JX3 OrthoDB:EOG4R5047 NextBio:20876335 Uniprot:Q56JX3
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|E2R8G3 [details] [associations]
symbol:LOC607833 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02910
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 CTD:6160
EMBL:AAEX03007435 EMBL:AAEX03011895 RefSeq:NP_001239132.1
RefSeq:XP_003432523.1 SMR:E2R8G3 Ensembl:ENSCAFT00000003480
Ensembl:ENSCAFT00000008024 GeneID:608123 GeneID:609530
KEGG:cfa:608123 KEGG:cfa:609530 NextBio:20893304 Uniprot:E2R8G3
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|J9NYL5 [details] [associations]
symbol:LOC608123 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OMA:TNDVRID EMBL:AAEX03016817
Ensembl:ENSCAFT00000018083 Uniprot:J9NYL5
Length = 130
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 10 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 69
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 70 DTRLNKAVWAKGIRN 84
>UNIPROTKB|J9PA41 [details] [associations]
symbol:LOC100855789 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 Ensembl:ENSCAFT00000048171 OMA:IDKRIHG
Uniprot:J9PA41
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|B7Z4C8 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC016738 HOGENOM:HOG000216660
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 HOVERGEN:HBG001549 OrthoDB:EOG4R5047 ChiTaRS:RPL31
HGNC:HGNC:10334 EMBL:AK297167 IPI:IPI00917298 SMR:B7Z4C8
STRING:B7Z4C8 Ensembl:ENST00000409038 UCSC:uc010yvu.1
Uniprot:B7Z4C8
Length = 130
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|B7Z4E3 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC016738 HOGENOM:HOG000216660
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 HOVERGEN:HBG001549 ChiTaRS:RPL31 HGNC:HGNC:10334
EMBL:AK297247 IPI:IPI00916315 SMR:B7Z4E3 STRING:B7Z4E3
Ensembl:ENST00000409650 UCSC:uc010yvv.1 Uniprot:B7Z4E3
Length = 120
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|C9JU56 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC016738 HOGENOM:HOG000216660
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 ChiTaRS:RPL31 HGNC:HGNC:10334 IPI:IPI00915795
ProteinModelPortal:C9JU56 SMR:C9JU56 STRING:C9JU56 PRIDE:C9JU56
Ensembl:ENST00000456292 ArrayExpress:C9JU56 Bgee:C9JU56
Uniprot:C9JU56
Length = 115
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|P62899 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 EMBL:CH471127 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 KO:K02910 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 EMBL:AC016738 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:TNDVRID CTD:6160
HOVERGEN:HBG001549 OrthoDB:EOG4R5047 ChiTaRS:RPL31 EMBL:X15940
EMBL:AB061830 EMBL:AK297483 EMBL:BC017343 EMBL:BC070210
EMBL:BC070373 EMBL:X69181 IPI:IPI00026302 IPI:IPI00848331
IPI:IPI00856058 PIR:S05576 RefSeq:NP_000984.1 RefSeq:NP_001092047.1
RefSeq:NP_001093163.1 UniGene:Hs.469473 ProteinModelPortal:P62899
SMR:P62899 IntAct:P62899 MINT:MINT-5000327 STRING:P62899
PhosphoSite:P62899 DMDM:51702807 SWISS-2DPAGE:P62899 PaxDb:P62899
PRIDE:P62899 DNASU:6160 Ensembl:ENST00000264258
Ensembl:ENST00000409028 Ensembl:ENST00000409320
Ensembl:ENST00000409733 GeneID:6160 KEGG:hsa:6160 UCSC:uc002taq.4
GeneCards:GC02P101618 H-InvDB:HIX0017577 HGNC:HGNC:10334
neXtProt:NX_P62899 PharmGKB:PA34715 PhylomeDB:P62899
GenomeRNAi:6160 NextBio:23923 ArrayExpress:P62899 Bgee:P62899
CleanEx:HS_RPL31 Genevestigator:P62899 GermOnline:ENSG00000071082
Uniprot:P62899
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|P62901 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02910 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OMA:TNDVRID CTD:6160 HOVERGEN:HBG001549 OrthoDB:EOG4R5047
EMBL:Z81183 RefSeq:XP_003124935.1 RefSeq:XP_003124936.1
RefSeq:XP_003361143.1 RefSeq:XP_003481189.1 RefSeq:XP_003481190.1
RefSeq:XP_003481191.1 RefSeq:XP_003481192.1
ProteinModelPortal:P62901 SMR:P62901 STRING:P62901 PRIDE:P62901
Ensembl:ENSSSCT00000008947 Ensembl:ENSSSCT00000032474
GeneID:100520127 GeneID:100737826 KEGG:ssc:100520127
KEGG:ssc:100737826 Uniprot:P62901
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|2319106 [details] [associations]
symbol:Rpl31l4 "ribosomal protein L31-like 4" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
RGD:2319106 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 OMA:NECEANE GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00361934 RefSeq:XP_002727988.1
RefSeq:XP_003752617.1 Ensembl:ENSRNOT00000045401 GeneID:100361974
KEGG:rno:100361974 UCSC:RGD:2319106 CTD:667682 Uniprot:D4ABZ9
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGCFAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|621202 [details] [associations]
symbol:Rpl31 "ribosomal protein L31" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 RGD:621202
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02910 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OMA:TNDVRID CTD:6160 HOVERGEN:HBG001549 OrthoDB:EOG4R5047
EMBL:X04809 EMBL:BC062228 IPI:IPI00231042 PIR:A26417
RefSeq:NP_071951.1 UniGene:Rn.1101 ProteinModelPortal:P62902
SMR:P62902 IntAct:P62902 STRING:P62902 PhosphoSite:P62902
PRIDE:P62902 Ensembl:ENSRNOT00000033733 GeneID:64298 KEGG:rno:64298
UCSC:RGD:621202 InParanoid:P62902 NextBio:612922
Genevestigator:P62902 GermOnline:ENSRNOG00000013508 Uniprot:P62902
Length = 125
Score = 259 (96.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 50/75 (66%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>FB|FBgn0025286 [details] [associations]
symbol:RpL31 "Ribosomal protein L31" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;NAS] [GO:0006412 "translation"
evidence=ISS;NAS] [GO:0005840 "ribosome" evidence=IDA] [GO:0000022
"mitotic spindle elongation" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
EMBL:AE013599 GO:GO:0006412 GO:GO:0003735 GO:GO:0000022 KO:K02910
GO:GO:0022625 eggNOG:COG2097 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:NECEANE
GeneTree:ENSGT00390000005200 CTD:6160 EMBL:AY113508
RefSeq:NP_610503.1 RefSeq:NP_724804.1 RefSeq:NP_724805.1
UniGene:Dm.20585 ProteinModelPortal:Q9V597 SMR:Q9V597
DIP:DIP-18938N MINT:MINT-955562 STRING:Q9V597 PaxDb:Q9V597
PRIDE:Q9V597 EnsemblMetazoa:FBtr0088525 EnsemblMetazoa:FBtr0088526
EnsemblMetazoa:FBtr0088527 GeneID:35988 KEGG:dme:Dmel_CG1821
FlyBase:FBgn0025286 InParanoid:Q9V597 OrthoDB:EOG4N2Z5C
PhylomeDB:Q9V597 ChiTaRS:RPL31 GenomeRNAi:35988 NextBio:796198
Bgee:Q9V597 GermOnline:CG1821 Uniprot:Q9V597
Length = 124
Score = 258 (95.9 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 108 TMVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
T K K +NEVVTR+ TIH+ KR+H +GFKKRAPRAIK +R F +++MGT DVRI
Sbjct: 2 TKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRI 61
Query: 168 DTRLNKHIWSKGINN 182
DTRLNKHIWSKGI +
Sbjct: 62 DTRLNKHIWSKGIRS 76
>TAIR|locus:2030497 [details] [associations]
symbol:AT1G20720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 EMBL:CP002684 GO:GO:0005739 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 KO:K15362 OMA:EKELDDS IPI:IPI00524588
RefSeq:NP_173495.5 UniGene:At.51696 ProteinModelPortal:F4HUN4
SMR:F4HUN4 PRIDE:F4HUN4 EnsemblPlants:AT1G20720.1 GeneID:838662
KEGG:ath:AT1G20720 Uniprot:F4HUN4
Length = 1175
Score = 208 (78.3 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 604 QYSVVYPTG--LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGL 661
+Y+ Y + LL G +WY QAYRALNQA GRCIRHR+D+GAI+ +D+R+ + ++ +
Sbjct: 697 KYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQRNRASI 756
Query: 662 SKWVRNQVQNTSSHNTFMENLRNF 685
SKW+R ++ + ME LR+F
Sbjct: 757 SKWLRQSIKVYDNFEASMEGLRSF 780
Score = 118 (46.6 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKE-LVQQKMFEQRTQDLQKTSFVFCGRSDFFLL 99
+ LLESPTG+GK+L+LLCSVLAWQ+ K L++ + + T + G F+
Sbjct: 65 HALLESPTGTGKSLSLLCSVLAWQQNYKSRLLKGNLSHSKAAPEAATDPLNHGGG--FI- 121
Query: 100 FRERRISDTM----VKKPATKKKPLNEVVTRDYTIHMHKRLHKV--GFKK---RAPRAIK 150
E + SDT V+K T K ++ T Y H ++ +V ++K R P A+
Sbjct: 122 -PETQPSDTPASTNVEKAETATKKRTKIPTIYYASRTHSQITQVIREYRKTGYRVPMAVL 180
Query: 151 VVRAFV---KKQMGTEDVRIDTRL 171
R + +G ++V + RL
Sbjct: 181 ASRKHYCTNRHVLGKDNVDDECRL 204
Score = 107 (42.7 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEK 320
+ LLESPTG+GK+L+LLCSVLAWQ+ K
Sbjct: 65 HALLESPTGTGKSLSLLCSVLAWQQNYK 92
Score = 71 (30.1 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQVSNLFEQ 267
Y IGG++VEFP + Y +Q++ M++V + ++
Sbjct: 27 YQIGGLQVEFPYQPYGTQLAFMSRVISTLDR 57
>UNIPROTKB|J9NS00 [details] [associations]
symbol:J9NS00 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03001435
Ensembl:ENSCAFT00000010709 OMA:KFAMKEL Uniprot:J9NS00
Length = 124
Score = 244 (91.0 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HKR+H VGFKKRAP A+K ++ F K+MGT DVRID
Sbjct: 5 KKGGEKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPWALKEIQKFAMKEMGTPDVRID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W+KGI N
Sbjct: 65 TRLNKAVWAKGIRN 78
Score = 38 (18.4 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 463 KGVNCEDYHVCMESS 477
KG+ YH+C+ S
Sbjct: 74 KGIRNVPYHICVRLS 88
>RGD|6500827 [details] [associations]
symbol:LOC100910017 "60S ribosomal protein L31-like"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:6500827 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 OMA:ILRRMAN Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00207486 RefSeq:XP_003750003.1
RefSeq:XP_003754086.1 PRIDE:D3ZX87 Ensembl:ENSRNOT00000043610
GeneID:100910017 KEGG:rno:100910017 Uniprot:D3ZX87
Length = 124
Score = 256 (95.2 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRID
Sbjct: 5 KKGGEKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W+KGI N
Sbjct: 65 TRLNKAVWAKGIRN 78
>UNIPROTKB|J9NZY0 [details] [associations]
symbol:J9NZY0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03013553
Ensembl:ENSCAFT00000009133 OMA:TREFTIN Uniprot:J9NZY0
Length = 125
Score = 255 (94.8 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +N+VVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINKVVTREYTINVHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|2323059 [details] [associations]
symbol:LOC100359986 "ribosomal protein L31-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
RGD:2323059 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047
IPI:IPI00359718 Ensembl:ENSRNOT00000039731 UCSC:RGD:2323059
OMA:RFPINEV Uniprot:D3ZVY6
Length = 121
Score = 255 (94.8 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 49/73 (67%), Positives = 59/73 (80%)
Query: 113 PATKKKP---LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDT 169
PA KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K R F K+MGT DVR+DT
Sbjct: 3 PAKKKKSRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKKNRKFAMKEMGTPDVRVDT 62
Query: 170 RLNKHIWSKGINN 182
RLNK +W+KGI N
Sbjct: 63 RLNKAVWAKGIRN 75
>UNIPROTKB|J9NTH4 [details] [associations]
symbol:J9NTH4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03000081 Ensembl:ENSCAFT00000044152 OMA:IREFAMK
Uniprot:J9NTH4
Length = 125
Score = 254 (94.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DV I
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVHI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|J9P080 [details] [associations]
symbol:J9P080 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:NECEANE
GeneTree:ENSGT00390000005200 EMBL:AAEX03003760
Ensembl:ENSCAFT00000023045 Uniprot:J9P080
Length = 125
Score = 254 (94.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 111 KKPATKKKP---LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKK APRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKSRSAINEVVTREYTINIHKRIHGVGFKKHAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|J9P252 [details] [associations]
symbol:J9P252 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:APWAVKS
GeneTree:ENSGT00390000005200 EMBL:AAEX03017521
Ensembl:ENSCAFT00000015235 Uniprot:J9P252
Length = 125
Score = 253 (94.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT D RI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEMRKFAMKEMGTPDARI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|B8ZZK4 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC016738 HOGENOM:HOG000216660
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 HOVERGEN:HBG001549 ChiTaRS:RPL31 HGNC:HGNC:10334
IPI:IPI00917675 SMR:B8ZZK4 STRING:B8ZZK4 Ensembl:ENST00000409000
Ensembl:ENST00000409711 Ensembl:ENST00000419276 Uniprot:B8ZZK4
Length = 79
Score = 253 (94.1 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 49/73 (67%), Positives = 59/73 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGI 180
DTRLNK +W+KGI
Sbjct: 65 DTRLNKAVWAKGI 77
>WB|WBGene00001049 [details] [associations]
symbol:dog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;IMP] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IGI;IMP] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0000003 GO:GO:0004003 GO:GO:0000723
GO:GO:0006289 GO:GO:0043570 eggNOG:COG1199
GeneTree:ENSGT00530000063199 GO:GO:0090329 KO:K15362 EMBL:Z81526
PIR:T21711 RefSeq:NP_493618.1 ProteinModelPortal:O62217 SMR:O62217
STRING:O62217 PaxDb:O62217 EnsemblMetazoa:F33H2.1.1
EnsemblMetazoa:F33H2.1.2 GeneID:173370 KEGG:cel:CELE_F33H2.1
UCSC:F33H2.1 CTD:173370 WormBase:F33H2.1 HOGENOM:HOG000021716
InParanoid:O62217 OMA:EKELDDS NextBio:879367 Uniprot:O62217
Length = 983
Score = 215 (80.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 40/89 (44%), Positives = 58/89 (65%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKN-------SQQGLSKW 664
G+L G +WY QAYRALNQALGRC+RH+ DWGA+L++D+R + S +SKW
Sbjct: 886 GILTGDEWYTTQAYRALNQALGRCLRHKNDWGAMLMIDERLERQTGNLVGGASSARVSKW 945
Query: 665 VRNQVQNTSSHNTFMENLRNFVRRRMEIQ 693
+R Q+++ S F N R F++RR ++
Sbjct: 946 IRAQLKSYPSFKEFNANFREFIQRRHAVE 974
Score = 116 (45.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 223 PSVKDKLKPSAATSYTIGGVKVEFPVKAYPSQISMMN----QVSNL---FEQPNHFLKYS 275
PS + + I G ++ P K ++ + N Q+ L P YS
Sbjct: 33 PSTSTEPDDKKPLHHEIAGEMIKNPAKGKRKRVQIKNDEYEQLMMLGVPVRVPRGLSLYS 92
Query: 276 SCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAW-------QRKEKELVQQKMF 328
+ K++ ++++ ++N L ESPTGSGKT+ALL S AW +R+ KE + F
Sbjct: 93 TQKLMIVRILTALKNSQNVLGESPTGSGKTMALLASTCAWLKQYIDEKRESKEKCEIHGF 152
Query: 329 EQRTQ 333
+TQ
Sbjct: 153 SGKTQ 157
Score = 110 (43.8 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAW-------QRKEKELVQQK 74
YS+ K++ ++++ ++N L ESPTGSGKT+ALL S AW +R+ KE +
Sbjct: 91 YSTQKLMIVRILTALKNSQNVLGESPTGSGKTMALLASTCAWLKQYIDEKRESKEKCEIH 150
Query: 75 MFEQRTQ 81
F +TQ
Sbjct: 151 GFSGKTQ 157
Score = 44 (20.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 105 ISDTMVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKV 151
I+ M+K PA K+ ++ +Y ++L +G R PR + +
Sbjct: 49 IAGEMIKNPAKGKRKRVQIKNDEY-----EQLMMLGVPVRVPRGLSL 90
>UNIPROTKB|H7C2W9 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000054 InterPro:IPR020052
Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC016738 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575 ChiTaRS:RPL31
HGNC:HGNC:10334 ProteinModelPortal:H7C2W9 PRIDE:H7C2W9
Ensembl:ENST00000441435 Uniprot:H7C2W9
Length = 108
Score = 252 (93.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 45/66 (68%), Positives = 56/66 (84%)
Query: 117 KKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIW 176
+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DVRIDTRLNK +W
Sbjct: 2 RSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVW 61
Query: 177 SKGINN 182
+KGI N
Sbjct: 62 AKGIRN 67
>RGD|1565894 [details] [associations]
symbol:RGD1565894 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:1565894 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OrthoDB:EOG4R5047 OMA:HKEDEDS
IPI:IPI00361462 Ensembl:ENSRNOT00000015408 Uniprot:D3ZK34
Length = 117
Score = 252 (93.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NE+VTR+YTI++HKR+H VGFKKRAP+A+K +R F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAINEMVTREYTINIHKRIHGVGFKKRAPQALKEIRKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|1562547 [details] [associations]
symbol:Rpl31l3 "ribosomal protein L31-like 3" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 RGD:1562547 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 OMA:PNKLYIL IPI:IPI00368786
Ensembl:ENSRNOT00000049211 UCSC:RGD:1562547 Uniprot:D3ZVF5
Length = 125
Score = 251 (93.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 49/75 (65%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPR +K +R F K+MGT DV I
Sbjct: 5 KKGGEKKKGCSAINEVVTREYTINIHKRIHGVGFKKRAPRTLKEIRKFAMKEMGTPDVHI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK IW+KGI N
Sbjct: 65 DTRLNKAIWAKGIRN 79
>UNIPROTKB|J9P9X7 [details] [associations]
symbol:RPL31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03012861
Ensembl:ENSCAFT00000010346 OMA:HKEDEDS Uniprot:J9P9X7
Length = 120
Score = 249 (92.7 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKRAPRA+K + F K+MGT DVRI
Sbjct: 5 KKGDEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIWKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>ZFIN|ZDB-GENE-060331-121 [details] [associations]
symbol:rpl31 "ribosomal protein L31" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 ZFIN:ZDB-GENE-060331-121 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02910 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OMA:TNDVRID CTD:6160 HOVERGEN:HBG001549 OrthoDB:EOG4R5047
EMBL:CU914623 EMBL:BC114301 IPI:IPI00758747 RefSeq:NP_001035141.1
UniGene:Dr.76115 STRING:Q24JV3 Ensembl:ENSDART00000075402
Ensembl:ENSDART00000149554 Ensembl:ENSDART00000149851 GeneID:677758
KEGG:dre:677758 InParanoid:Q24JV3 NextBio:20902366 Uniprot:Q24JV3
Length = 123
Score = 247 (92.0 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 109 MVKKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDV 165
M K KKK +NEVVTR+YTI++HKR+H + FK+RAPRA+K +R F K+MGT DV
Sbjct: 1 MAPKKGEKKKGRSAINEVVTREYTINIHKRIHGISFKRRAPRALKEIRKFAVKEMGTPDV 60
Query: 166 RIDTRLNKHIWSKGINN 182
RIDTRLNK +W+KG+ N
Sbjct: 61 RIDTRLNKAVWAKGVRN 77
>UNIPROTKB|J9P8A1 [details] [associations]
symbol:J9P8A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03011883 Ensembl:ENSCAFT00000007911 OMA:DERIDTR
Uniprot:J9P8A1
Length = 116
Score = 246 (91.7 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK ++EVVTR+YTI++HKR+H VGFKKRAPRA+K +R F K+MGT DV ID
Sbjct: 5 KKGGEKKGHSAISEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVHID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W+KGI N
Sbjct: 65 TRLNKAVWAKGIRN 78
>RGD|1596752 [details] [associations]
symbol:LOC681338 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:1596752 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00393527 Ensembl:ENSRNOT00000047517
Uniprot:D3ZLA5
Length = 125
Score = 246 (91.7 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HK +H VGFKKRAPRA+K +R K+MGT DVRI
Sbjct: 5 KKGGEKKKGHSAINEVVTREYTINIHKHIHGVGFKKRAPRALKEIRKSAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|J9PBI6 [details] [associations]
symbol:J9PBI6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03000583 Ensembl:ENSCAFT00000048614 OMA:PNKLYIL
Uniprot:J9PBI6
Length = 125
Score = 244 (91.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HK +H VGF+KRAPRA+K +R F K+MGT DVR+
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKCIHGVGFQKRAPRALKEIRKFAMKEMGTPDVRM 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|2321629 [details] [associations]
symbol:LOC100364129 "ribosomal protein L31-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 RGD:2321629 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OrthoDB:EOG4R5047 OMA:KIAMKEM
IPI:IPI00392340 Ensembl:ENSRNOT00000042660 Uniprot:D3ZFA3
Length = 125
Score = 244 (91.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 47/75 (62%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KK+ +NEVVTR+YTI++HKR+H VGFKKRAPRA+K +R K+MGT DV I
Sbjct: 5 KKGGEKKQGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKIAMKEMGTPDVHI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|F1PC48 [details] [associations]
symbol:F1PC48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03007197
Ensembl:ENSCAFT00000002300 OMA:INIHKRM Uniprot:F1PC48
Length = 126
Score = 242 (90.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HKR+H VGFKKRA RA+K ++ F K+MGT DVRID
Sbjct: 7 KKGGEKKGRSAINEVVTREYTINIHKRMHGVGFKKRALRALKEIQKFAMKEMGTPDVRID 66
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W+KGI N
Sbjct: 67 TRLNKAVWAKGIRN 80
>UNIPROTKB|J9P560 [details] [associations]
symbol:J9P560 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03017554 Ensembl:ENSCAFT00000015681 Uniprot:J9P560
Length = 125
Score = 242 (90.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +N+VVTR+YTI++HKR+H VGFKKRAPRA+K ++ F K+MG DVRI
Sbjct: 5 KKGGEKKKGRSAINQVVTREYTINIHKRIHGVGFKKRAPRALKEIQKFAMKEMGISDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+ GI N
Sbjct: 65 DTRLNKAVWANGIRN 79
>POMBASE|SPAC890.08 [details] [associations]
symbol:rpl31 "60S ribosomal protein L31 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
PomBase:SPAC890.08 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 KO:K02910 GO:GO:0022625 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OrthoDB:EOG4H75N6 OMA:TNDVRID
EMBL:U97381 PIR:T50264 RefSeq:NP_594826.1 ProteinModelPortal:Q9URX6
SMR:Q9URX6 IntAct:Q9URX6 STRING:Q9URX6 PRIDE:Q9URX6
EnsemblFungi:SPAC890.08.1 GeneID:2543475 KEGG:spo:SPAC890.08
NextBio:20804487 Uniprot:Q9URX6
Length = 113
Score = 241 (89.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 44/68 (64%), Positives = 54/68 (79%)
Query: 115 TKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKH 174
TKK +N+VVTRDYTIHMHKRL+ V FKKRAPRAIK + AF +K M T++VR+D LNK
Sbjct: 4 TKKSAINQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKE 63
Query: 175 IWSKGINN 182
+W +GI N
Sbjct: 64 VWKRGIRN 71
>RGD|1561841 [details] [associations]
symbol:RGD1561841 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:1561841 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00367647 RefSeq:XP_001055235.3
RefSeq:XP_227107.3 Ensembl:ENSRNOT00000042248 GeneID:310388
KEGG:rno:310388 UCSC:RGD:1561841 CTD:310388 Uniprot:D3ZAC7
Length = 125
Score = 241 (89.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 46/75 (61%), Positives = 61/75 (81%)
Query: 111 KKPATKKK--P-LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK + KKK P +++VVTR+YTI++HK +H VGFKK AP+++K +R F KK+MGT DVRI
Sbjct: 5 KKGSEKKKGHPAIHDVVTREYTINIHKHIHGVGFKKHAPQSLKEIRNFAKKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIKN 79
>RGD|1564839 [details] [associations]
symbol:RGD1564839 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1564839
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047 OMA:KFAMKEL
IPI:IPI00361677 Ensembl:ENSRNOT00000043590 UCSC:RGD:1564839
Uniprot:D3ZKU5
Length = 124
Score = 241 (89.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HKR+H VGFKKRAP A+K +R F K++GT DVR D
Sbjct: 5 KKGGKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPWALKEIRKFAMKELGTPDVRTD 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK IW+KGI N
Sbjct: 65 TRLNKAIWAKGIRN 78
>UNIPROTKB|J9P389 [details] [associations]
symbol:J9P389 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03008342
Ensembl:ENSCAFT00000002943 OMA:QNAPAKK Uniprot:J9P389
Length = 130
Score = 240 (89.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HKR+H VGFKKR PRA+K ++ F K+ GT DVRI
Sbjct: 10 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRVPRALKEIQKFAMKETGTPDVRI 69
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI +
Sbjct: 70 DTRLNKAVWAKGIRS 84
>UNIPROTKB|J9P618 [details] [associations]
symbol:J9P618 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03008072 Ensembl:ENSCAFT00000004889 OMA:KIAMKEM
Uniprot:J9P618
Length = 125
Score = 240 (89.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YT ++HKR+H VGFKK APRA+K +R F K+MGT DV I
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTTNIHKRIHGVGFKKCAPRALKEIRKFAMKEMGTPDVSI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>RGD|1592945 [details] [associations]
symbol:LOC680384 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1592945
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047 OMA:YTINILT
IPI:IPI00390235 Ensembl:ENSRNOT00000047850 Uniprot:D3Z8W1
Length = 124
Score = 239 (89.2 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +N+VVTR+YTI++HKR+H VGFKKRAPRA+K ++ F K+MGT DV ID
Sbjct: 5 KKGGEKKGRSAINKVVTREYTINIHKRIHGVGFKKRAPRALKEIQKFAMKEMGTPDVHID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W +GI N
Sbjct: 65 TRLNKAVWDRGIRN 78
>RGD|1563551 [details] [associations]
symbol:RGD1563551 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1563551
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047 OMA:QNAPAKK
IPI:IPI00200539 PRIDE:D3Z8P3 Ensembl:ENSRNOT00000047507
UCSC:RGD:1563551 Uniprot:D3Z8P3
Length = 124
Score = 238 (88.8 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HK +H VGFKKRAPRA+K +R F K+MGT DV ID
Sbjct: 5 KKGGEKKGRSAINEVVTREYTINIHKLIHGVGFKKRAPRALKEIRKFAMKEMGTPDVHID 64
Query: 169 TRLNKHIWSKGI 180
TRLNK +W+KGI
Sbjct: 65 TRLNKAVWAKGI 76
>RGD|1597308 [details] [associations]
symbol:LOC690384 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1597308
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047 IPI:IPI00768386
Ensembl:ENSRNOT00000060519 UCSC:RGD:1597308 OMA:DENSTNK
NextBio:740806 Uniprot:D4ACQ2
Length = 125
Score = 238 (88.8 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 46/75 (61%), Positives = 58/75 (77%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +N+V+TR+YTI++HKR+H VGFKK APRA K ++ F K+MGT DVRI
Sbjct: 5 KKGGEKKKGCSSINKVMTREYTINIHKRIHGVGFKKCAPRAFKEIQKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKGVWAKGIRN 79
>UNIPROTKB|J9NUD9 [details] [associations]
symbol:J9NUD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03002765 Ensembl:ENSCAFT00000021043 Uniprot:J9NUD9
Length = 119
Score = 236 (88.1 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 43/63 (68%), Positives = 53/63 (84%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
+NEVVTR+YTI++HKR+H VGFKKRAP A+K +R F K+MGT DVRIDTRLNK +W+K
Sbjct: 15 INEVVTREYTINIHKRIHGVGFKKRAPGALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKR 74
Query: 180 INN 182
I N
Sbjct: 75 IRN 77
>UNIPROTKB|F1SH66 [details] [associations]
symbol:LOC100625352 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 Pfam:PF01198
ProDom:PD006030 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:FP340331
RefSeq:XP_003355562.1 Ensembl:ENSSSCT00000000522 GeneID:100625352
KEGG:ssc:100625352 Uniprot:F1SH66
Length = 124
Score = 235 (87.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 46/76 (60%), Positives = 58/76 (76%)
Query: 109 MVKKPATKKKP--LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVR 166
+ KK KK P +NEVVTR+YTI++HK +H +GFKKRAPRA+K ++ F K+MGT DV
Sbjct: 3 LAKKGREKKCPSAINEVVTREYTINIHKHIHCLGFKKRAPRALKEIQKFAMKEMGTPDVC 62
Query: 167 IDTRLNKHIWSKGINN 182
I TRLNK IW+KGI N
Sbjct: 63 IHTRLNKAIWAKGIRN 78
>RGD|1562808 [details] [associations]
symbol:RGD1562808 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1562808
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OrthoDB:EOG4R5047 IPI:IPI00958434
Ensembl:ENSRNOT00000006851 UCSC:RGD:1562808 OMA:NDHPSIN
Uniprot:D3ZNA9
Length = 121
Score = 235 (87.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 43/63 (68%), Positives = 53/63 (84%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
+N+VVTR+YTI++HKR+H VGFKKRAPRA+K + F K+MGT DV IDTRLNK IW+KG
Sbjct: 16 INKVVTREYTINIHKRIHGVGFKKRAPRALKEIWKFAMKEMGTPDVHIDTRLNKAIWAKG 75
Query: 180 INN 182
I N
Sbjct: 76 IRN 78
>RGD|1561195 [details] [associations]
symbol:RGD1561195 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:1561195 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00368723 Ensembl:ENSRNOT00000046725
UCSC:RGD:1561195 OMA:THEHTIN Uniprot:D4A172
Length = 124
Score = 232 (86.7 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +N+VVT++YTI++HK +H VGFKK PRA+K +R F K+MGT DVRID
Sbjct: 5 KKGGKKKGRSAINKVVTQEYTINIHKSIHGVGFKKHDPRALKEIRKFAMKEMGTPDVRID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK IW+KGI N
Sbjct: 65 TRLNKAIWAKGIRN 78
>UNIPROTKB|J9PAK4 [details] [associations]
symbol:J9PAK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03013796 Ensembl:ENSCAFT00000009085 OMA:GRSATNE
Uniprot:J9PAK4
Length = 131
Score = 231 (86.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 45/75 (60%), Positives = 56/75 (74%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK NEVVTR+YTI++HK +H VGFKK AP+A+K ++ F K+MGT DV I
Sbjct: 11 KKGGEKKKGRSATNEVVTREYTINIHKHIHGVGFKKHAPQALKEIQKFAMKEMGTPDVLI 70
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 71 DTRLNKAVWAKGIRN 85
>UNIPROTKB|J9NSI9 [details] [associations]
symbol:J9NSI9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03005649 Ensembl:ENSCAFT00000019967 OMA:YTINILT
Uniprot:J9NSI9
Length = 125
Score = 229 (85.7 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KK+ +NEVVTR+YTI++ R+H VGFKKRAPRA+K ++ F K+MGT DV I
Sbjct: 5 KKGGEKKEGRSAINEVVTREYTINILTRIHGVGFKKRAPRALKEIQKFAMKEMGTPDVHI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|J9JHT8 [details] [associations]
symbol:J9JHT8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03005193 Ensembl:ENSCAFT00000022640 Uniprot:J9JHT8
Length = 148
Score = 228 (85.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEV+TR+YTI++HKR+H VGFKKRAP A+K ++ F K+MGT DV ID
Sbjct: 29 KKGGEKKGRSAINEVLTREYTINIHKRIHGVGFKKRAPLALKEIQKFAMKEMGTPDVCID 88
Query: 169 TRLNKHIWSKGINN 182
TRL K +W+KGI N
Sbjct: 89 TRLTKAVWAKGIRN 102
>TAIR|locus:2165051 [details] [associations]
symbol:AT5G56710 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198
ProDom:PD006030 PROSITE:PS01144 EnsemblPlants:AT5G56710.1
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0006412 GO:GO:0003735 EMBL:AB013392 KO:K02910 GO:GO:0022625
HOGENOM:HOG000216660 ProtClustDB:CLSN2705581 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575 EMBL:AY050393
EMBL:AY124821 EMBL:AY085397 EMBL:Z26807 IPI:IPI00535482
RefSeq:NP_200482.1 UniGene:At.20565 ProteinModelPortal:P51420
SMR:P51420 STRING:P51420 PRIDE:P51420 GeneID:835772
KEGG:ath:AT5G56710 GeneFarm:290 TAIR:At5g56710 InParanoid:P51420
OMA:APWAVKS PhylomeDB:P51420 Genevestigator:P51420
GermOnline:AT5G56710 Uniprot:P51420
Length = 119
Score = 228 (85.3 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 116 KKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHI 175
KK EV+TR+YTI++H+RLHK FKK+AP+AIK +R F +K MGT+DVR+D +LNK I
Sbjct: 4 KKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQI 63
Query: 176 WSKGI 180
WSKGI
Sbjct: 64 WSKGI 68
>TAIR|locus:2136809 [details] [associations]
symbol:AT4G26230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198
ProDom:PD006030 PROSITE:PS01144 EnsemblPlants:AT4G26230.1
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL049171 EMBL:AL161564
GO:GO:0006412 GO:GO:0003735 UniGene:At.71547 KO:K02910
GO:GO:0022625 eggNOG:COG2097 HOGENOM:HOG000216660
ProtClustDB:CLSN2705581 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 EMBL:BT005841 EMBL:AY085228
IPI:IPI00523484 PIR:T06007 RefSeq:NP_194353.1 UniGene:At.43245
ProteinModelPortal:Q9STR1 SMR:Q9STR1 STRING:Q9STR1 GeneID:828729
KEGG:ath:AT4G26230 GeneFarm:294 TAIR:At4g26230 InParanoid:Q9STR1
OMA:NECEANE PhylomeDB:Q9STR1 Genevestigator:Q9STR1
GermOnline:AT4G26230 Uniprot:Q9STR1
Length = 119
Score = 227 (85.0 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 116 KKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHI 175
KK EVVTR+YTI++H+RLH FKK+AP+AIK +R F +K+MGT+DVR+D +LNK I
Sbjct: 4 KKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQI 63
Query: 176 WSKGI 180
WSKGI
Sbjct: 64 WSKGI 68
>WB|WBGene00004445 [details] [associations]
symbol:rpl-31 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198
ProDom:PD006030 PROSITE:PS01144 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0005840 GO:GO:0040035 GO:GO:0003735 EMBL:Z82077 KO:K02910
eggNOG:COG2097 HOGENOM:HOG000216660 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 OMA:TNDVRID RefSeq:NP_493391.1
RefSeq:NP_493392.1 ProteinModelPortal:Q9U332 SMR:Q9U332
STRING:Q9U332 PaxDb:Q9U332 PRIDE:Q9U332 EnsemblMetazoa:W09C5.6a.1
EnsemblMetazoa:W09C5.6a.2 GeneID:173235 KEGG:cel:CELE_W09C5.6
UCSC:W09C5.6a.1 CTD:173235 WormBase:W09C5.6a WormBase:W09C5.6b
InParanoid:Q9U332 NextBio:878823 Uniprot:Q9U332
Length = 122
Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 113 PATKKKP---LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDT 169
P +KK +NEVVTR+YTIH+H R+ +G KKRAPRAI ++ F K QM T DVR+DT
Sbjct: 3 PKNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDT 62
Query: 170 RLNKHIWSKGINN 182
+LNK IWSKGI N
Sbjct: 63 KLNKFIWSKGIKN 75
>UNIPROTKB|G3MX45 [details] [associations]
symbol:G3MX45 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 Pfam:PF01198
ProDom:PD006030 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:DAAA02071527
Ensembl:ENSBTAT00000064020 NextBio:20926893 Uniprot:G3MX45
Length = 124
Score = 225 (84.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NE+V R+YTI++HKR+H VGFKK APRA+K + F K+MGT DV ID
Sbjct: 5 KKGGKKKGWSAINEMVIREYTINIHKRIHGVGFKKHAPRALKDIWKFTMKEMGTPDVHID 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK IW++GI N
Sbjct: 65 TRLNKAIWAQGIRN 78
>UNIPROTKB|F1SRB7 [details] [associations]
symbol:RPL31 "60S ribosomal protein L31" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 Pfam:PF01198
ProDom:PD006030 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:CU633651
Ensembl:ENSSSCT00000000079 Uniprot:F1SRB7
Length = 124
Score = 224 (83.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KK+ +NEVVTR++T +HKR+H VG KKRAPRA+K +R F +MGT DVR
Sbjct: 4 KKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRN 63
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 64 DTRLNKAVWAKGIRN 78
>UNIPROTKB|Q16X92 [details] [associations]
symbol:AAEL008960 "Regulator of telomere elongation
helicase 1 homolog" species:7159 "Aedes aegypti" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH477545 RefSeq:XP_001653621.1 UniGene:Aae.7622
ProteinModelPortal:Q16X92 PRIDE:Q16X92 EnsemblMetazoa:AAEL008960-RA
GeneID:5571306 KEGG:aag:AaeL_AAEL008960 VectorBase:AAEL008960
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
PhylomeDB:Q16X92 Uniprot:Q16X92
Length = 1010
Score = 182 (69.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
++ G +WY ++A RA+NQA+GR IRH+ D+GAILL D RF++ + LS W++ + NT
Sbjct: 682 IISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNHRQKSQLSSWIQKHL-NT 740
Query: 673 SSHNTF---MENLRNFVRRRMEIQLEEERVKR 701
+ H F + L F R +I L + ++ R
Sbjct: 741 NQHQNFGPIIGELSRFFRNAEKI-LPQSKLSR 771
Score = 117 (46.2 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRK 342
+VI+ + N +LESPTG+GKTL+LLCS LAW +K VQ M T DL++ F
Sbjct: 27 RVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMRTNIT-DLKE--FEM 83
Query: 343 LKISRLKAKDFSTNNGMEQQL 363
++ +L S GME+ L
Sbjct: 84 VQRKKLGGDGGS---GMEELL 101
Score = 116 (45.9 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKTSFV 89
+VI+ + N +LESPTG+GKTL+LLCS LAW +K VQ M T DL++ V
Sbjct: 27 RVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKKAQVQANMRTNIT-DLKEFEMV 84
Score = 50 (22.7 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQV 261
Y I G+ V FP + Y Q M++V
Sbjct: 4 YQINGITVNFPFEPYQVQRDYMSRV 28
>UNIPROTKB|J9P5Y4 [details] [associations]
symbol:J9P5Y4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03014260 Ensembl:ENSCAFT00000011382 Uniprot:J9P5Y4
Length = 116
Score = 223 (83.6 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+YTI++HK +H VGFKK APRA+K + F K+MGT DV D
Sbjct: 5 KKGGEKKGRSAINEVVTREYTINIHKHIHGVGFKKPAPRALKEIWKFAMKEMGTPDVCTD 64
Query: 169 TRLNKHIWSKGINN 182
TRLNK +W+KGI N
Sbjct: 65 TRLNKAVWAKGIRN 78
>UNIPROTKB|J9P8F8 [details] [associations]
symbol:J9P8F8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
GeneTree:ENSGT00390000005200 EMBL:AAEX03003513
Ensembl:ENSCAFT00000029898 OMA:VIREHTI Uniprot:J9P8F8
Length = 125
Score = 223 (83.6 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK + EVV R++TI++HKR+H VGFKKRA RA+K ++ F K+MGT DVRI
Sbjct: 5 KKGGEKKKGRSAIKEVVIREHTINIHKRIHGVGFKKRASRALKEIQKFAMKEMGTPDVRI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KG N
Sbjct: 65 DTRLNKAVWAKGRRN 79
>UNIPROTKB|B0W9F4 [details] [associations]
symbol:CPIJ003765 "Regulator of telomere elongation
helicase 1 homolog" species:7176 "Culex quinquefasciatus"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
EMBL:DS231864 RefSeq:XP_001845338.1 ProteinModelPortal:B0W9F4
EnsemblMetazoa:CPIJ003765-RA GeneID:6035102
KEGG:cqu:CpipJ_CPIJ003765 VectorBase:CPIJ003765 PhylomeDB:B0W9F4
Uniprot:B0W9F4
Length = 978
Score = 182 (69.1 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 36/91 (39%), Positives = 57/91 (62%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
++ G +WY ++A RA+NQA+GR IRH+ D+GAILL D RF++ + LS W++ + NT
Sbjct: 684 IISGDEWYSLEAARAVNQAIGRVIRHKNDYGAILLCDNRFHNPRQKAQLSSWIQKHL-NT 742
Query: 673 SSHNTFMENLRNFVR--RRMEIQLEEERVKR 701
+ H TF +R + R E L + ++ R
Sbjct: 743 AQHPTFGPIVRELSQFFRNAEKTLPQAKLTR 773
Score = 121 (47.7 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ--DLQKIPF 340
+VI+ + N +LESPTG+GKTL+LLCS LAW +K VQ QRT +L++ F
Sbjct: 27 RVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKKAQVQAS---QRTNVSELKEFEF 83
Query: 341 RKLKI 345
K K+
Sbjct: 84 EKKKM 88
Score = 114 (45.2 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKTSFVF 90
+VI+ + N +LESPTG+GKTL+LLCS LAW +K VQ QRT + F F
Sbjct: 27 RVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWILHKKAQVQAS---QRTNVSELKEFEF 83
Score = 47 (21.6 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQV 261
Y I G+ V FP + Y Q M +V
Sbjct: 4 YLINGIPVNFPFEPYQVQRDYMARV 28
Score = 40 (19.1 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 507 IEDLEQFSTRALVSPCFQLIQLDLMLDEHLNPY 539
IEDL + ST+ P F +L D PY
Sbjct: 209 IEDLVRVSTKLKACPFFMSKELIENADVLFMPY 241
>UNIPROTKB|B4PZB4 [details] [associations]
symbol:GE16425 "Regulator of telomere elongation helicase 1
homolog" species:7245 "Drosophila yakuba" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CM000162 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002099973.1
EnsemblMetazoa:FBtr0262943 GeneID:6524109 KEGG:dya:Dyak_GE16425
FlyBase:FBgn0233951 Uniprot:B4PZB4
Length = 985
Score = 182 (69.1 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 673 SSHNTF---MENLRNFVRR-RMEIQLEEER 698
+ F + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 119 (46.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 334
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M + D
Sbjct: 27 KVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKMEKAD 78
Score = 119 (46.9 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 82
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M + D
Sbjct: 27 KVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKMEKAD 78
Score = 52 (23.4 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + YP Q + M +V
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV 28
Score = 37 (18.1 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 507 IEDLEQFSTRALVSPCFQLIQLDLMLDEHLNPY 539
IEDL + R + P F +L D PY
Sbjct: 196 IEDLVKVGQRLKICPYFASRELVPQADITFMPY 228
>UNIPROTKB|B4M891 [details] [associations]
symbol:GJ16649 "Regulator of telomere elongation helicase 1
homolog" species:7244 "Drosophila virilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH940653 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002056881.1 EnsemblMetazoa:FBtr0232574 GeneID:6633257
KEGG:dvi:Dvir_GJ16649 FlyBase:FBgn0203833 InParanoid:B4M891
Uniprot:B4M891
Length = 1005
Score = 185 (70.2 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 40/91 (43%), Positives = 53/91 (58%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDARFQDMSQVQQLSKWIRGHLGAR 731
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLE-EERV 699
+S + LR F + + + EERV
Sbjct: 732 PQSSPFGPIVRELRQFFKHAEQTMAQPEERV 762
Score = 118 (46.6 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 39/118 (33%), Positives = 57/118 (48%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE-QRTQDLQKIPFR 341
+VI N +LESPTG+GKTL+LLC+ LAW R + QQ M + Q Q Q
Sbjct: 27 KVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEQQQYMQKLQLDQQKQATGGA 86
Query: 342 KLKISRLKAKDFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKLK--VLNGRSK 397
++ L A NN +++ T +Q +R+ K+T +K VL R +
Sbjct: 87 GAGVADLNAVMGKANNWGVPKVIYASRTHSQLSQAMRE-LKRTAYANMKSVVLGSRDQ 143
Score = 112 (44.5 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 29/66 (43%), Positives = 37/66 (56%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE-QRTQDLQKTSFV 89
+VI N +LESPTG+GKTL+LLC+ LAW R + QQ M + Q Q Q T
Sbjct: 27 KVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWIRTRQSEQQQYMQKLQLDQQKQATGGA 86
Query: 90 FCGRSD 95
G +D
Sbjct: 87 GAGVAD 92
Score = 45 (20.9 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 355 TNNGMEQQLLTC-ITTINQQEDELRQSTKKTRVDKLKVLNGRSKNLVSSIDFILG 408
T G LL + I ++ E +Q +K ++D+ K G + V+ ++ ++G
Sbjct: 44 TGTGKTLSLLCASLAWIRTRQSEQQQYMQKLQLDQQKQATGGAGAGVADLNAVMG 98
Score = 44 (20.5 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q + M +V
Sbjct: 6 IAGIPVHFPFEPYEVQRAYMEKV 28
Score = 42 (19.8 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 338 IPFRKLKISR--LKAKDFSTNNGMEQQLLT 365
+PF LK + LK + TN E QLL+
Sbjct: 645 LPFPPLKDPKVVLKRRYLETNRTKENQLLS 674
>RGD|1562055 [details] [associations]
symbol:RGD1562055 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 RGD:1562055 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00361429 Ensembl:ENSRNOT00000041674
Uniprot:D3ZDE9
Length = 117
Score = 221 (82.9 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+ TI++HK +H VGFKK APRA+K ++ F K+M T DVR+
Sbjct: 5 KKGGKKKKGRSAINEVVTRESTINIHKCIHGVGFKKCAPRALKEIQKFAMKEMWTPDVRV 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W+KGI N
Sbjct: 65 DTRLNKAVWAKGIRN 79
>UNIPROTKB|B4I0K4 [details] [associations]
symbol:GM12432 "Regulator of telomere elongation helicase 1
homolog" species:7238 "Drosophila sechellia" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH480819 GO:GO:0010569
TIGRFAMs:TIGR00604 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_002036876.1 EnsemblMetazoa:FBtr0195417 GeneID:6612367
KEGG:dse:Dsec_GM12432 FlyBase:FBgn0167369 Uniprot:B4I0K4
Length = 966
Score = 182 (69.1 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 653 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 712
Query: 673 SSHNTF---MENLRNFVRR-RMEIQLEEER 698
+ F + LR F + ++L +ER
Sbjct: 713 PQCSPFGPIVRELRQFFKNAEANMKLPDER 742
Score = 111 (44.1 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKI 338
+VI N +LESPTG+GKTL+LLCS LAW R + Q +M + D I
Sbjct: 27 KVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQMQMVKMEKADFSGI 82
Score = 109 (43.4 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 82
+VI N +LESPTG+GKTL+LLCS LAW R + Q +M + D
Sbjct: 27 KVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQMQMVKMEKAD 78
Score = 52 (23.4 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + YP Q + M +V
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV 28
>UNIPROTKB|J9NZ04 [details] [associations]
symbol:LOC489638 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03003924 Ensembl:ENSCAFT00000031306 OMA:CSALNEV
Uniprot:J9NZ04
Length = 124
Score = 220 (82.5 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK LNEVVTR+YTI++HK +H VGFKK AP+A+K + F K+MGT DV ID
Sbjct: 5 KKGGEKKGCSALNEVVTREYTINIHKCIHGVGFKKCAPQALKEIWKFSMKEMGTPDVHID 64
Query: 169 TRLNKHIWSKGINN 182
T+LNK +W+KGI N
Sbjct: 65 TKLNKAVWAKGIRN 78
>UNIPROTKB|F1SLI2 [details] [associations]
symbol:F1SLI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 Pfam:PF01198
ProDom:PD006030 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:CU633694
Ensembl:ENSSSCT00000012421 OMA:PNEDEDS Uniprot:F1SLI2
Length = 128
Score = 220 (82.5 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NEVVTR+Y I++HKR+H VGFKK APRA+K +R F K+MGT DV ID
Sbjct: 10 KKGGEKKGRSTINEVVTREYMINIHKRIHGVGFKKCAPRALKQIRKFAMKEMGTLDVGID 69
Query: 169 TRLNKHIWSKGINN 182
RLNK IW+KGI N
Sbjct: 70 -RLNKAIWAKGIRN 82
>UNIPROTKB|B3NSW1 [details] [associations]
symbol:GG18780 "Regulator of telomere elongation helicase 1
homolog" species:7220 "Drosophila erecta" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:CH954180
KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001977003.1
EnsemblMetazoa:FBtr0138834 GeneID:6550838 KEGG:der:Dere_GG18780
FlyBase:FBgn0110988 Uniprot:B3NSW1
Length = 985
Score = 182 (69.1 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 673 SSHNTF---MENLRNFVRR-RMEIQLEEER 698
+ F + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 116 (45.9 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 334
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M + D
Sbjct: 27 KVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKIEKAD 78
Score = 116 (45.9 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 82
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M + D
Sbjct: 27 KVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMVKIEKAD 78
Score = 52 (23.4 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + YP Q + M +V
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV 28
Score = 37 (18.1 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 507 IEDLEQFSTRALVSPCFQLIQLDLMLDEHLNPY 539
IEDL + R + P F +L D PY
Sbjct: 196 IEDLVKVGQRLKICPYFASRELVPQADITFMPY 228
>UNIPROTKB|B3MSG8 [details] [associations]
symbol:GF20802 "Regulator of telomere elongation helicase 1
homolog" species:7217 "Drosophila ananassae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH902622 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001964274.1
EnsemblMetazoa:FBtr0125502 GeneID:6503494 KEGG:dan:Dana_GF20802
FlyBase:FBgn0097808 InParanoid:B3MSG8 Uniprot:B3MSG8
Length = 994
Score = 176 (67.0 bits), Expect = 7.2e-17, Sum P(3) = 7.2e-17
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G +WY ++A RA+NQA+GR IRHR D+GAILL D RF Q LSKW+R + +
Sbjct: 672 LLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDSRFKDAAQVQQLSKWIRGHLGDR 731
Query: 673 SSHNTF---MENLRNFVR 687
+ F + LR F +
Sbjct: 732 PQCSPFGPIVRELRQFFK 749
Score = 116 (45.9 bits), Expect = 7.2e-17, Sum P(3) = 7.2e-17
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 27 KVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMIK 73
Score = 116 (45.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
+VIQ N +LESPTG+GKTL+LLCS LAW R + QQ+M +
Sbjct: 27 KVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQQQMIK 73
Score = 52 (23.4 bits), Expect = 7.2e-17, Sum P(3) = 7.2e-17
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + YP Q + M +V
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV 28
>UNIPROTKB|B4L1Z2 [details] [associations]
symbol:GI15901 "Regulator of telomere elongation helicase 1
homolog" species:7230 "Drosophila mojavensis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 TIGRFAMs:TIGR00604
EMBL:CH933810 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002010396.1
EnsemblMetazoa:FBtr0166626 GeneID:6584754 KEGG:dmo:Dmoj_GI15901
FlyBase:FBgn0138650 InParanoid:B4L1Z2 Uniprot:B4L1Z2
Length = 1014
Score = 188 (71.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR+D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDARFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRMEIQLE-EERV 699
+S + LR F + + ++ +ERV
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEQTMVQPDERV 763
Score = 108 (43.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 42/137 (30%), Positives = 62/137 (45%)
Query: 268 PNHFL--KYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR---KEKEL 322
P HF Y + +VI N +LESPTG+GKTL+LLCS LAW R E ++
Sbjct: 10 PVHFPFEPYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQI 69
Query: 323 VQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNNGMEQQLLTCITTINQQEDELRQSTK 382
QK+ ++ Q IS L NN +++ T +Q +R+ K
Sbjct: 70 NMQKLQMEQQQRQATGGSATGAISDLALTMGKANNWGVPKVIYASRTHSQLTQAMRE-LK 128
Query: 383 KTRVDKLK--VLNGRSK 397
+T ++ VL R +
Sbjct: 129 RTAYASMRSVVLGSRDQ 145
Score = 108 (43.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR---KEKELVQQKMFEQRTQDLQKT 86
+VI N +LESPTG+GKTL+LLCS LAW R E ++ QK+ + Q Q T
Sbjct: 27 KVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQINMQKL-QMEQQQRQAT 84
Score = 45 (20.9 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 241 GVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLESPT 300
G+ V FP +YP M+NQ + ++ + SS K + L+ +G ++ + + E
Sbjct: 557 GLLVFFP--SYP----MLNQCVDAWQASGLWADLSSRKPIFLEP-RGKDQFTSTMEEFYQ 609
Query: 301 GSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKLKISR--LKAKDFSTNNG 358
+ C + + K E + R + +PF LK + LK + TN
Sbjct: 610 AIRDSKGA-CFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRT 668
Query: 359 MEQQLLT 365
E QLL+
Sbjct: 669 KENQLLS 675
Score = 45 (20.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q + M +V
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKV 28
>UNIPROTKB|B4JNS2 [details] [associations]
symbol:GH24089 "Regulator of telomere elongation helicase 1
homolog" species:7222 "Drosophila grimshawi" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH916371 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 RefSeq:XP_001992658.1 EnsemblMetazoa:FBtr0159503
GeneID:6565576 KEGG:dgr:Dgri_GH24089 FlyBase:FBgn0131545
InParanoid:B4JNS2 Uniprot:B4JNS2
Length = 986
Score = 186 (70.5 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY ++A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+RN +
Sbjct: 673 LLSGNEWYNLEATRAVNQAIGRVIRHRNDYGAILLCDARFQDASQVQQLSKWIRNHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVR 687
+S + LR F +
Sbjct: 733 PQSSPFGPIVRELRQFFK 750
Score = 110 (43.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKT 86
N +LESPTG+GKTL+LLCS L W R + VQ M Q+ Q Q+T
Sbjct: 37 NGVLESPTGTGKTLSLLCSTLGWIRTRQSEVQLNM--QKLQHDQQT 80
Score = 109 (43.4 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQ---QKM-FEQRTQDLQKIPFRKLKISRL 348
N +LESPTG+GKTL+LLCS L W R + VQ QK+ +Q+TQ S +
Sbjct: 37 NGVLESPTGTGKTLSLLCSTLGWIRTRQSEVQLNMQKLQHDQQTQLTGAAGAGAAMGSEI 96
Query: 349 KAKDFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKLK--VLNGRSK 397
A +NN +++ T +Q +R+ K+T ++ VL R +
Sbjct: 97 AAVIGKSNNWGVPKVIYASRTHSQLTQAMRE-LKRTAYANMRAVVLGSRDQ 146
Score = 45 (20.9 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 241 GVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLESPT 300
G+ V FP +YP M+NQ + ++ + SS K + L+ +G ++ + + E
Sbjct: 557 GLLVFFP--SYP----MLNQCVDAWQASGLWADISSRKPIFLEP-RGKDQFTSTMEEFYQ 609
Query: 301 GSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKLKISR--LKAKDFSTNNG 358
+ C + + K E + R + +PF LK + LK + TN
Sbjct: 610 AIRDSKGA-CFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRT 668
Query: 359 MEQQLLT 365
E QLL+
Sbjct: 669 RENQLLS 675
Score = 44 (20.5 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q + M +V
Sbjct: 6 IAGIPVHFPFEPYDVQRAYMEKV 28
>TAIR|locus:2052000 [details] [associations]
symbol:AT2G19740 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198
ProDom:PD006030 PROSITE:PS01144 EnsemblPlants:AT2G19740.1
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AC005169 KO:K02910 GO:GO:0022625
EMBL:AY052313 EMBL:AY054616 EMBL:AY061893 EMBL:AY072459
IPI:IPI00520557 PIR:E84580 RefSeq:NP_179564.1 UniGene:At.12892
ProteinModelPortal:Q9SLL7 SMR:Q9SLL7 STRING:Q9SLL7 PaxDb:Q9SLL7
GeneID:816493 KEGG:ath:AT2G19740 GeneFarm:292 TAIR:At2g19740
eggNOG:COG2097 HOGENOM:HOG000216660 InParanoid:Q9SLL7 OMA:ILRRMAN
PhylomeDB:Q9SLL7 ProtClustDB:CLSN2705581 Genevestigator:Q9SLL7
GermOnline:AT2G19740 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 Uniprot:Q9SLL7
Length = 119
Score = 215 (80.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 122 EVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI 180
EVVTR+YTI++H+RLH FKK+AP AIK +R F K MGT+DVR+D +LNK IWSKGI
Sbjct: 10 EVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGI 68
>UNIPROTKB|J9NZC0 [details] [associations]
symbol:J9NZC0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03002243 Ensembl:ENSCAFT00000016775 OMA:WAKARRN
Uniprot:J9NZC0
Length = 123
Score = 214 (80.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +N+VVTR+YTI++HK +H GFKKRAP A+K +R F K++GT DVR
Sbjct: 5 KKGGEKKKGRSAINKVVTREYTINIHKHIH--GFKKRAPWALKEIRKFAMKEIGTPDVRT 62
Query: 168 DTRLNKHIWSKGI 180
DTRLNK +W+KGI
Sbjct: 63 DTRLNKAVWAKGI 75
>UNIPROTKB|B4NDG5 [details] [associations]
symbol:GK24923 "Regulator of telomere elongation helicase 1
homolog" species:7260 "Drosophila willistoni" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH964239 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002071885.1 STRING:B4NDG5 EnsemblMetazoa:FBtr0255574
GeneID:6648559 KEGG:dwi:Dwil_GK24923 FlyBase:FBgn0226882
InParanoid:B4NDG5 Uniprot:B4NDG5
Length = 998
Score = 186 (70.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR+D+GAILL D RF + Q LSKW+R +
Sbjct: 678 LLTGQEWYNLDATRAVNQAIGRVIRHRHDYGAILLCDSRFQDNSQVQQLSKWIRGHLGAR 737
Query: 670 QNTSSHNTFMENLRNFVRRRME-IQLEEER 698
S + LR F R E ++ +ER
Sbjct: 738 PQCSPFGPIVRELRQFFRHAEETMEQPKER 767
Score = 107 (42.7 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 268 PNHFL--KYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQ 325
P HF Y + +VI N +LESPTG+GKTL+LLCS LAW R ++ QQ
Sbjct: 10 PVHFPFEPYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRT-RQSEQQ 68
Query: 326 KMFEQRTQD 334
K ++ QD
Sbjct: 69 KQI-RKLQD 76
Score = 106 (42.4 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 82
N +LESPTG+GKTL+LLCS LAW R ++ QQK ++ QD
Sbjct: 37 NGVLESPTGTGKTLSLLCSSLAWIRT-RQSEQQKQI-RKLQD 76
Score = 45 (20.9 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q + M +V
Sbjct: 6 IAGIPVHFPFEPYEVQRAFMEKV 28
>FB|FBgn0029798 [details] [associations]
symbol:CG4078 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 EMBL:AE014298 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 EMBL:BT021290 EMBL:EU217688 EMBL:EU217689
EMBL:EU217690 EMBL:EU217691 EMBL:EU217692 EMBL:EU217693
EMBL:EU217694 EMBL:EU217695 EMBL:EU217696 EMBL:EU217697
EMBL:EU217698 EMBL:EU217699 RefSeq:NP_572254.1 UniGene:Dm.11709
ProteinModelPortal:Q9W484 SMR:Q9W484 IntAct:Q9W484
MINT:MINT-4080348 PaxDb:Q9W484 PRIDE:Q9W484
EnsemblMetazoa:FBtr0070807 EnsemblMetazoa:FBtr0332398 GeneID:31497
KEGG:dme:Dmel_CG4078 UCSC:CG4078-RA FlyBase:FBgn0029798
InParanoid:Q9W484 PhylomeDB:Q9W484 GenomeRNAi:31497 NextBio:773915
Bgee:Q9W484 Uniprot:Q9W484
Length = 985
Score = 182 (69.1 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 39/90 (43%), Positives = 54/90 (60%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R + +
Sbjct: 672 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDR 731
Query: 673 SSHNTF---MENLRNFVRR-RMEIQLEEER 698
+ F + LR F + ++L +ER
Sbjct: 732 PQCSPFGPIVRELRQFFKNAEANMKLPDER 761
Score = 110 (43.8 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 334
+VI N +LESPTG+GKTL+LLCS LAW R + Q++M + D
Sbjct: 27 KVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVKMEKAD 78
Score = 110 (43.8 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQD 82
+VI N +LESPTG+GKTL+LLCS LAW R + Q++M + D
Sbjct: 27 KVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVKMEKAD 78
Score = 52 (23.4 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + YP Q + M +V
Sbjct: 6 IAGIPVHFPFEPYPVQRAYMEKV 28
Score = 37 (18.1 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 507 IEDLEQFSTRALVSPCFQLIQLDLMLDEHLNPY 539
IEDL + R + P F +L D PY
Sbjct: 196 IEDLVKVGQRLKICPYFASRELVPQADITFMPY 228
>UNIPROTKB|G3N0I3 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:DAAA02048371 Ensembl:ENSBTAT00000065712 Uniprot:G3N0I3
Length = 756
Score = 248 (92.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF S S+ GLSKWVR +
Sbjct: 670 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLI 729
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 730 QHHSTFESALESLAEFAKKHQKV 752
Score = 38 (18.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 319 EKEL--VQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNNGMEQQLLTCITTINQQEDE 376
EKE+ + K+ ++T L P K K K F + G + C T ED
Sbjct: 109 EKEVHHLDAKVASEKTTKLNS-PLGK-KTYSCKKDCFQSPPGHCSRCC-CSTKQGNSEDS 165
Query: 377 LRQSTKKTRVDKLKV 391
+TKK K K+
Sbjct: 166 -SNTTKKDHGGKFKI 179
Score = 37 (18.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 ALLCSVLAWQRKEKELVQQKMFE 77
A+ CS++ W E + ++ +E
Sbjct: 302 AVCCSLINWLEASSEHLVERNYE 324
Score = 37 (18.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 307 ALLCSVLAWQRKEKELVQQKMFE 329
A+ CS++ W E + ++ +E
Sbjct: 302 AVCCSLINWLEASSEHLVERNYE 324
>RGD|1596734 [details] [associations]
symbol:LOC681356 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1596734
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
OrthoDB:EOG4R5047 OMA:TINIHKP IPI:IPI00388786
Ensembl:ENSRNOT00000041763 Uniprot:D3ZZ60
Length = 125
Score = 212 (79.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NE+VTR+YTI++HKR+H V F+KR P A+K ++ F K+MGT DV
Sbjct: 5 KKGGKKKKGHSAINELVTREYTINIHKRIHGVAFRKRDPWAVKEIQKFAMKEMGTPDVHT 64
Query: 168 DTRLNKHIWSKGINN 182
D +LNK +W+KGI N
Sbjct: 65 DNKLNKAVWAKGIRN 79
>UNIPROTKB|F1LVW2 [details] [associations]
symbol:F1LVW2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OMA:CSALNEV IPI:IPI00766981 Ensembl:ENSRNOT00000045604
Uniprot:F1LVW2
Length = 125
Score = 212 (79.7 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 45/75 (60%), Positives = 54/75 (72%)
Query: 111 KKPATKKKP---LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+ TI++HK +H VGFKKRAPRA+K + F K+MGT DV I
Sbjct: 5 KKGGEKKKDCSAVNEVVTRECTINIHKCIHGVGFKKRAPRALKEIWKFAMKEMGTPDVCI 64
Query: 168 DTRLNKHIWSKGINN 182
D RLNK IW+K I N
Sbjct: 65 DIRLNKAIWAKRIRN 79
>ASPGD|ASPL0000026338 [details] [associations]
symbol:AN10681 species:162425 "Emericella nidulans"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=IEA] [GO:0006450
"regulation of translational fidelity" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 GO:GO:0006412
GO:GO:0005840 EMBL:BN001305 GO:GO:0003735 HOGENOM:HOG000216660
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 OMA:TNDVRID EnsemblFungi:CADANIAT00003602
Uniprot:C8VGD2
Length = 122
Score = 211 (79.3 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 116 KKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHI 175
++ + +VVTR+YTI++HKR H V FKKRAPRAIK +RAF + MGT DVR+D +LNK +
Sbjct: 10 QRSAIADVVTREYTINLHKRTHGVSFKKRAPRAIKEIRAFATRAMGTTDVRLDPQLNKKV 69
Query: 176 WSKGI 180
W GI
Sbjct: 70 WEAGI 74
>UNIPROTKB|E1BNG9 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000048969 Uniprot:E1BNG9
Length = 1098
Score = 248 (92.4 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF S S+ GLSKWVR +
Sbjct: 744 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLI 803
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 804 QHHSTFESALESLAEFAKKHQKV 826
Score = 38 (18.4 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 319 EKEL--VQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNNGMEQQLLTCITTINQQEDE 376
EKE+ + K+ ++T L P K K K F + G + C T ED
Sbjct: 109 EKEVHHLDAKVASEKTTKLNS-PLGK-KTYSCKKDCFQSPPGHCSRCC-CSTKQGNSEDS 165
Query: 377 LRQSTKKTRVDKLKV 391
+TKK K K+
Sbjct: 166 -SNTTKKDHGGKFKI 179
Score = 37 (18.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 ALLCSVLAWQRKEKELVQQKMFE 77
A+ CS++ W E + ++ +E
Sbjct: 376 AVCCSLINWLEASSEHLVERNYE 398
Score = 37 (18.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 307 ALLCSVLAWQRKEKELVQQKMFE 329
A+ CS++ W E + ++ +E
Sbjct: 376 AVCCSLINWLEASSEHLVERNYE 398
>UNIPROTKB|E1BTS7 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00819960 Ensembl:ENSGALT00000039433
ArrayExpress:E1BTS7 Uniprot:E1BTS7
Length = 1085
Score = 158 (60.7 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 35/79 (44%), Positives = 44/79 (55%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G WY QA RA+NQA+GR IRHR D+GAI L D RF + N + L WVR V
Sbjct: 678 LSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNVRGKLPSWVRPYVNVYD 737
Query: 674 SHNTFMENLRNFVRRRMEI 692
+ + ++ F R EI
Sbjct: 738 NFGHAVRSVSVFFRVAQEI 756
Score = 131 (51.2 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 15 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
QR ++ P R +
Sbjct: 74 QRMNGVELFPDRPM 87
Score = 123 (48.4 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 15 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 73
Query: 78 QRTQDLQ 84
QR ++
Sbjct: 74 QRMNGVE 80
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 238 TIGGVKVEFPVKAYPSQISMMNQV 261
T+ GV V+FP + Y Q + M +V
Sbjct: 5 TLRGVTVDFPFQPYECQETYMAKV 28
>UNIPROTKB|E2RLA6 [details] [associations]
symbol:RTEL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:VLKMQFL EMBL:AAEX03014162
EMBL:AAEX03014163 Ensembl:ENSCAFT00000020689 Uniprot:E2RLA6
Length = 1232
Score = 171 (65.3 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 610 PTG-LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQ 668
P G LL G +WY+ QA RA+NQA+GR IRHR+D+GAI L D RF +++ L WVR
Sbjct: 671 PGGQLLSGHEWYRQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAHVDARAQLPSWVRPH 730
Query: 669 VQNTSSHNTFMENLRNFVR 687
V+ S + ++ F R
Sbjct: 731 VRVYDSFGPVIRDVAQFFR 749
Score = 115 (45.5 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
+V++ K N +LESPTG+GKTL LLCS LAW+ ++ + +R Q
Sbjct: 27 KVLECLQKRVNGILESPTGTGKTLCLLCSTLAWREHLRDAISAHKIAERVQ 77
Score = 115 (45.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
+V++ K N +LESPTG+GKTL LLCS LAW+ ++ + +R Q
Sbjct: 27 KVLECLQKRVNGILESPTGTGKTLCLLCSTLAWREHLRDAISAHKIAERVQ 77
Score = 51 (23.0 bits), Expect = 8.7e-16, Sum P(3) = 8.7e-16
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 238 TIGGVKVEFPVKAYPSQISMMNQV 261
T+ GV V+FP + Y Q M++V
Sbjct: 5 TLNGVAVDFPFEPYKCQEEYMSKV 28
>UNIPROTKB|E1BTS6 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00822587 Ensembl:ENSGALT00000039434
ArrayExpress:E1BTS6 Uniprot:E1BTS6
Length = 1124
Score = 158 (60.7 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 35/79 (44%), Positives = 44/79 (55%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G WY QA RA+NQA+GR IRHR D+GAI L D RF + N + L WVR V
Sbjct: 678 LSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNVRGKLPSWVRPYVNVYD 737
Query: 674 SHNTFMENLRNFVRRRMEI 692
+ + ++ F R EI
Sbjct: 738 NFGHAVRSVSVFFRVAQEI 756
Score = 131 (51.2 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 15 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
QR ++ P R +
Sbjct: 74 QRMNGVELFPDRPM 87
Score = 123 (48.4 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 15 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 73
Query: 78 QRTQDLQ 84
QR ++
Sbjct: 74 QRMNGVE 80
Score = 47 (21.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 238 TIGGVKVEFPVKAYPSQISMMNQV 261
T+ GV V+FP + Y Q + M +V
Sbjct: 5 TLRGVTVDFPFQPYECQETYMAKV 28
>UNIPROTKB|F1NE49 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0000723
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 OMA:VLKMQFL
EMBL:AADN02019151 EMBL:AADN02019152 EMBL:AADN02019153
IPI:IPI00597328 Ensembl:ENSGALT00000009881 ArrayExpress:F1NE49
Uniprot:F1NE49
Length = 1127
Score = 158 (60.7 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 35/79 (44%), Positives = 44/79 (55%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G WY QA RA+NQA+GR IRHR D+GAI L D RF + N + L WVR V
Sbjct: 680 LSGHQWYNQQASRAVNQAIGRVIRHRQDYGAIFLCDDRFTTDNVRGKLPSWVRPYVNVYD 739
Query: 674 SHNTFMENLRNFVRRRMEI 692
+ + ++ F R EI
Sbjct: 740 NFGHAVRSVSVFFRVAQEI 758
Score = 131 (51.2 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 17 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 75
Query: 330 QRTQDLQKIPFRKL 343
QR ++ P R +
Sbjct: 76 QRMNGVELFPDRPM 89
Score = 123 (48.4 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ K+ + +
Sbjct: 17 FQPYE-CQETYMAKVLECLQTKVNGILESPTGTGKTLCLLCSTLAWREHFKDTISARKIA 75
Query: 78 QRTQDLQ 84
QR ++
Sbjct: 76 QRMNGVE 82
Score = 48 (22.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 232 SAATSYTIGGVKVEFPVKAYPSQISMMNQV 261
+A T+ GV V+FP + Y Q + M +V
Sbjct: 1 AAMPRVTLRGVTVDFPFQPYECQETYMAKV 30
>SGD|S000004398 [details] [associations]
symbol:RPL31B "Ribosomal 60S subunit protein L31B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
SGD:S000004398 EMBL:BK006945 GO:GO:0003735 EMBL:U19729
GO:GO:0002181 GO:GO:0006450 RefSeq:NP_013510.3 GeneID:851122
KEGG:sce:YLR406C KO:K02910 GO:GO:0022625 eggNOG:COG2097
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4H75N6 PIR:S55962 RefSeq:NP_013511.4
ProteinModelPortal:P0C2H9 SMR:P0C2H9 DIP:DIP-29387N
MINT:MINT-568580 STRING:P0C2H9 PaxDb:P0C2H9 PeptideAtlas:P0C2H9
EnsemblFungi:YLR406C GeneID:851123 KEGG:sce:YLR407W OMA:TNDVRID
NextBio:967848 Genevestigator:P0C2H9 Uniprot:P0C2H9
Length = 113
Score = 207 (77.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI++HKRLH V FKKRAPRA+K ++ F K MGTEDVR+ LN+ IW +G
Sbjct: 4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>UNIPROTKB|F1MMS0 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
OMA:GVHKISD EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000061499 Uniprot:F1MMS0
Length = 1164
Score = 248 (92.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 612 GLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQ--QGLSKWVRNQV 669
GLL G WY+IQAYRALNQALGRCIRH+ DWGA++LVD RF S S+ GLSKWVR +
Sbjct: 744 GLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQLI 803
Query: 670 QNTSSHNTFMENLRNFVRRRMEI 692
Q+ S+ + +E+L F ++ ++
Sbjct: 804 QHHSTFESALESLAEFAKKHQKV 826
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 ALLCSVLAWQRKEKELVQQKMFE 77
A+ CS++ W E + ++ +E
Sbjct: 376 AVCCSLINWLEASSEHLVERNYE 398
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 307 ALLCSVLAWQRKEKELVQQKMFE 329
A+ CS++ W E + ++ +E
Sbjct: 376 AVCCSLINWLEASSEHLVERNYE 398
>UNIPROTKB|Q6H1L8 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10096 "Mus spretus" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
GO:GO:0000723 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:AY481613
EMBL:AY481614 EMBL:AY481615 EMBL:AY481616 EMBL:AY481617
EMBL:AY530632 ProteinModelPortal:Q6H1L8 Uniprot:Q6H1L8
Length = 1203
Score = 162 (62.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WYQ QA RA+NQA+GR IRHR+D+GAI L D RF +++ L WVR ++
Sbjct: 677 LSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F+R
Sbjct: 737 NFGHAIRDVAQFLR 750
Score = 120 (47.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
+V++ K N +LESPTG+GKTL LLCS LAWQ+ ++ + +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKIAERVQ 77
Score = 120 (47.3 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
+V++ K N +LESPTG+GKTL LLCS LAWQ+ ++ + +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAISSLKIAERVQ 77
Score = 53 (23.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
+ GV V+FP + YP Q M +V
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKV 28
>MGI|MGI:2139369 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
KO:K11136 CTD:51750 EMBL:AY481619 EMBL:AY481620 EMBL:AY481621
EMBL:AY481622 EMBL:AY481623 EMBL:AK173097 EMBL:AK145145
EMBL:AL928965 EMBL:BC105578 EMBL:BC144977 EMBL:BC144978
EMBL:BC145658 IPI:IPI00274165 IPI:IPI00467288 IPI:IPI00754466
IPI:IPI00756345 IPI:IPI00756903 IPI:IPI00929860
RefSeq:NP_001001882.3 RefSeq:NP_001160137.1 RefSeq:NP_001160138.1
RefSeq:NP_001160139.1 RefSeq:NP_001160140.1 UniGene:Mm.11333
ProteinModelPortal:Q0VGM9 SMR:Q0VGM9 STRING:Q0VGM9
PhosphoSite:Q0VGM9 PRIDE:Q0VGM9 Ensembl:ENSMUST00000048608
Ensembl:ENSMUST00000054622 Ensembl:ENSMUST00000098971
Ensembl:ENSMUST00000108814 Ensembl:ENSMUST00000108815
Ensembl:ENSMUST00000148252 GeneID:269400 KEGG:mmu:269400
UCSC:uc008olu.2 UCSC:uc008olv.2 UCSC:uc008olw.2 UCSC:uc008olx.2
UCSC:uc012cmk.1 UCSC:uc012cml.1 InParanoid:Q6H1L3 OMA:VLKMQFL
ChiTaRS:RTEL1 NextBio:392832 Bgee:Q0VGM9 Genevestigator:Q0VGM9
Uniprot:Q0VGM9
Length = 1203
Score = 161 (61.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WYQ QA RA+NQA+GR IRHR+D+GAI L D RF +++ L WVR ++
Sbjct: 677 LSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 737 NFGHVIRDVAQFFR 750
Score = 121 (47.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
+V++ K N +LESPTG+GKTL LLCS LAWQ+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKIAERVQ 77
Score = 121 (47.7 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
+V++ K N +LESPTG+GKTL LLCS LAWQ+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQHLRDAVSSLKIAERVQ 77
Score = 53 (23.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
+ GV V+FP + YP Q M +V
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKV 28
>ZFIN|ZDB-GENE-050306-11 [details] [associations]
symbol:rtel1 "regulator of telomere elongation
helicase 1" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-050306-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 CTD:51750 EMBL:BX004876
IPI:IPI01016862 RefSeq:NP_001013328.2 UniGene:Dr.87074
ProteinModelPortal:F1QNW3 Ensembl:ENSDART00000123445 GeneID:503732
KEGG:dre:503732 NextBio:20866277 Bgee:F1QNW3 Uniprot:F1QNW3
Length = 1177
Score = 169 (64.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WY+ QA RA+NQA+GR IRHR D+GAI L D RF S +++ L WVR V+
Sbjct: 676 LTGQEWYRQQASRAVNQAIGRVIRHREDYGAIFLCDHRFKSADARNQLPSWVRPYVKIYD 735
Query: 674 SHNTFMENLRNFVR 687
T + ++ F R
Sbjct: 736 GFGTMVRDVAQFFR 749
Score = 115 (45.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQR 331
+VI+ K N +LESPTG+GKTL LLCS LAW+ K+ + + +R
Sbjct: 27 KVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRDHFKDTISARKITER 75
Score = 115 (45.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQR 79
+VI+ K N +LESPTG+GKTL LLCS LAW+ K+ + + +R
Sbjct: 27 KVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRDHFKDTISARKITER 75
Score = 50 (22.7 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 241 GVKVEFPVKAYPSQISMMNQV 261
G+ V+FP YP Q M++V
Sbjct: 8 GINVDFPFTPYPCQEDYMSKV 28
>DICTYBASE|DDB_G0279061 [details] [associations]
symbol:rpl31 "S60 ribosomal protein L31"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000054 InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030
PROSITE:PS01144 dictyBase:DDB_G0279061 GenomeReviews:CM000152_GR
GO:GO:0006412 EMBL:AAFI02000026 GO:GO:0005840 GO:GO:0003735
KO:K02910 eggNOG:COG2097 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:TNDVRID RefSeq:XP_641946.1
ProteinModelPortal:Q54XB5 SMR:Q54XB5 STRING:Q54XB5 PRIDE:Q54XB5
EnsemblProtists:DDB0231149 GeneID:8621860 KEGG:ddi:DDB_G0279061
ProtClustDB:CLSZ2447938 Uniprot:Q54XB5
Length = 111
Score = 205 (77.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 121 NEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGI 180
+E VTR+YTI++HKRL+ FK RAP+A+K V+ F +K MGT+DVRID +LNK +WS+GI
Sbjct: 4 SEAVTREYTINLHKRLYGTTFKDRAPKAVKQVKLFAQKIMGTKDVRIDNKLNKFLWSQGI 63
Query: 181 NN 182
N
Sbjct: 64 KN 65
>UNIPROTKB|J9NXZ0 [details] [associations]
symbol:J9NXZ0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03000382 Ensembl:ENSCAFT00000003058 OMA:FKRNISH
Uniprot:J9NXZ0
Length = 131
Score = 204 (76.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 111 KKPATKKKP----LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVR 166
KK +KK +NEVVTR+YTI++HK H + FKKRAP+A+K + F K+MGT DV
Sbjct: 5 KKGGEEKKKGHSAINEVVTREYTINIHKCTHGMDFKKRAPQALKEIWKFAVKEMGTPDVC 64
Query: 167 IDTRLNKHIWSKGINN 182
IDTRLN +W+KGI N
Sbjct: 65 IDTRLNHTLWAKGIRN 80
>SGD|S000002233 [details] [associations]
symbol:RPL31A "Ribosomal 60S subunit protein L31A"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IMP] [GO:0002181 "cytoplasmic translation" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
SGD:S000002233 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 PDB:4B6A
PDBsum:4B6A GO:GO:0006450 KO:K02910 GO:GO:0022625 PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I PDB:2WW9 PDB:2WWA PDBsum:2WW9 PDBsum:2WWA
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:NECEANE EMBL:X01441
EMBL:Z74123 PIR:S67611 RefSeq:NP_010208.1 ProteinModelPortal:P0C2H8
SMR:P0C2H8 DIP:DIP-5135N STRING:P0C2H8 PeptideAtlas:P0C2H8
PRIDE:P0C2H8 EnsemblFungi:YDL075W GeneID:851484 KEGG:sce:YDL075W
GeneTree:ENSGT00390000005200 OrthoDB:EOG4H75N6
EvolutionaryTrace:P0C2H8 NextBio:968804 ArrayExpress:P0C2H8
Genevestigator:P0C2H8 GermOnline:YDL075W Uniprot:P0C2H8
Length = 113
Score = 204 (76.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
L +VVTR+YTI++HKRLH V FKKRAPRA+K ++ F K MGT+DVR+ LN+ IW +G
Sbjct: 4 LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRG 63
Query: 180 I 180
+
Sbjct: 64 V 64
>UNIPROTKB|A4K436 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 EMBL:DQ323152 EMBL:DQ323153
EMBL:DQ420360 EMBL:DQ420361 EMBL:DQ420362 EMBL:DQ420363
IPI:IPI00840795 IPI:IPI00905335 IPI:IPI00930023 IPI:IPI00930030
IPI:IPI00930035 RefSeq:NP_001091044.1 UniGene:Bt.6256
ProteinModelPortal:A4K436 GeneID:505721 KEGG:bta:505721 CTD:51750
InParanoid:A4K434 OrthoDB:EOG412M4Q NextBio:20867282 Uniprot:A4K436
Length = 1216
Score = 168 (64.2 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G DWY+ QA RA+NQA+GR IRHR+D+GA+ L D RF +++ L WVR V+
Sbjct: 675 LSGHDWYRQQASRAVNQAIGRVIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHVKVYD 734
Query: 674 SHNTFMENLRNFVR 687
S + ++ F R
Sbjct: 735 SFGHVIRDVAQFFR 748
Score = 117 (46.2 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ ++ V +
Sbjct: 15 FQPYK-CQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLRDAVSARRIA 73
Query: 330 QRTQDLQKIPFRKL 343
+R + P R L
Sbjct: 74 ERASG-ELFPDRTL 86
Score = 115 (45.5 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLCS LAW+ ++ V +
Sbjct: 15 FQPYK-CQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREHLRDAVSARRIA 73
Query: 78 QR 79
+R
Sbjct: 74 ER 75
Score = 52 (23.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 238 TIGGVKVEFPVKAYPSQISMMNQVSN-LFEQPNHFLK 273
T+ GV V+FP + Y Q M++V L E+ N L+
Sbjct: 5 TLKGVTVDFPFQPYKCQEEYMSKVLECLQEKVNGILE 41
>UNIPROTKB|B4GU19 [details] [associations]
symbol:GL14463 "Regulator of telomere elongation helicase 1
homolog" species:7234 "Drosophila persimilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136
OrthoDB:EOG4S4MX7 EMBL:CH479190 RefSeq:XP_002022098.1
EnsemblMetazoa:FBtr0180078 GeneID:6596883 KEGG:dpe:Dper_GL14463
FlyBase:FBgn0152068 Uniprot:B4GU19
Length = 1009
Score = 179 (68.1 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 37/82 (45%), Positives = 48/82 (58%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRME 691
+S + LR F + E
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEE 754
Score = 107 (42.7 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKL--KISRLKA 350
N +LESPTG+GKTL+LLC+ LAW R + QQ+M + + + P +S L
Sbjct: 37 NGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIKLKATSKEGGPGSGPGGDLSELAM 96
Query: 351 KDFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKLK--VLNGRSK 397
NN +++ T +Q +R+ K+T ++ VL R +
Sbjct: 97 TVGQANNWGVPKVIYASRTHSQLNQAMRE-LKRTAYANMRSVVLGSRDQ 144
Score = 105 (42.0 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
N +LESPTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 37 NGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
Score = 42 (19.8 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q M +V
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKV 28
Score = 42 (19.8 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 338 IPFRKLKISR--LKAKDFSTNNGMEQQLLT 365
+PF LK + LK + TN E QLL+
Sbjct: 646 LPFPPLKDPKVILKRRYLETNRTKENQLLS 675
>UNIPROTKB|Q29FS3 [details] [associations]
symbol:GA17940 "Regulator of telomere elongation helicase 1
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH379065 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001354453.2
GeneID:4814338 KEGG:dpo:Dpse_GA17940 FlyBase:FBgn0077949
InParanoid:Q29FS3 Uniprot:Q29FS3
Length = 1009
Score = 179 (68.1 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 37/82 (45%), Positives = 48/82 (58%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV--- 669
LL G +WY + A RA+NQA+GR IRHR D+GAILL D RF + Q LSKW+R +
Sbjct: 673 LLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGAR 732
Query: 670 QNTSSHNTFMENLRNFVRRRME 691
+S + LR F + E
Sbjct: 733 PQSSPFGPIVRELRQFFKHAEE 754
Score = 107 (42.7 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKL--KISRLKA 350
N +LESPTG+GKTL+LLC+ LAW R + QQ+M + + + P +S L
Sbjct: 37 NGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIKLKATSKEGGPGSGPGGDLSELAM 96
Query: 351 KDFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKLK--VLNGRSK 397
NN +++ T +Q +R+ K+T ++ VL R +
Sbjct: 97 TVGQANNWGVPKVIYASRTHSQLNQAMRE-LKRTAYANMRSVVLGSRDQ 144
Score = 105 (42.0 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
N +LESPTG+GKTL+LLC+ LAW R + QQ+M +
Sbjct: 37 NGVLESPTGTGKTLSLLCASLAWIRTRQSEHQQQMIK 73
Score = 42 (19.8 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
I G+ V FP + Y Q M +V
Sbjct: 6 IAGIPVHFPFEPYNVQRDYMEKV 28
Score = 42 (19.8 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 338 IPFRKLKISR--LKAKDFSTNNGMEQQLLT 365
+PF LK + LK + TN E QLL+
Sbjct: 646 LPFPPLKDPKVILKRRYLETNRTKENQLLS 675
>UNIPROTKB|A8WS58 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6238 "Caenorhabditis briggsae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 EMBL:HE601486 RefSeq:XP_002639805.1
EnsemblMetazoa:CBG02256 GeneID:8581799 KEGG:cbr:CBG02256
CTD:8581799 WormBase:CBG02256 HOGENOM:HOG000154218 OMA:ENDIENQ
Uniprot:A8WS58
Length = 994
Score = 172 (65.6 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 618 DWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNT 677
DWYQ++A+RA+NQA+GR +RH+ D+G ++L+D R+ S + KW+RN + S+N
Sbjct: 697 DWYQMEAFRAVNQAIGRVLRHKNDFGTVVLIDTRYASAKPEM-FPKWLRNTISRCDSNNC 755
Query: 678 FMENLRNFVRRRMEIQ-LEEERVKR 701
++ R F R I+ + E +K+
Sbjct: 756 ALKTARFFKERGHLIENSKSEYIKK 780
Score = 115 (45.5 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 10 KTYLNEPNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 69
KT + P F Y +I VI + + LESPTG+GKTL+LLCS LAW +K KE
Sbjct: 16 KTSIKFP--FEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAWVQKLKE 73
Score = 112 (44.5 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 271 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 321
F Y +I VI + + LESPTG+GKTL+LLCS LAW +K KE
Sbjct: 23 FEPYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAWVQKLKE 73
Score = 40 (19.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 471 HVC--MESSVAFDQLIQLDLMLDEHLNPYVLKVKDTPCIEDLEQFSTRALVSPCFQLIQL 528
HVC + S + + D + + N +L+ + IED + T+ + P F Q
Sbjct: 158 HVCRGLVSKRSCHYYNKFDALTTDKANE-ILEKGEAMDIEDFVKIGTQNSICPYFMSRQR 216
Query: 529 DLMLDEHLNPY 539
+ L PY
Sbjct: 217 SETAELILLPY 227
Score = 39 (18.8 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 470 YHVCMESSVA-FDQLIQLDLMLDEHLNPYVLKVKDTPCIEDLEQ 512
Y + +++S+ FD+ L+ + + + + + CIE+L++
Sbjct: 239 YKLDLKNSIVIFDEAHNLESICESNASAELSSTSIALCIEELKK 282
>TAIR|locus:2016209 [details] [associations]
symbol:AT1G79950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR003822 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
TIGRFAMs:TIGR00604 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11136
OMA:PFPPLKD IPI:IPI00530732 RefSeq:NP_178113.3 UniGene:At.34013
ProteinModelPortal:F4HQE2 SMR:F4HQE2 PRIDE:F4HQE2
EnsemblPlants:AT1G79950.1 GeneID:844335 KEGG:ath:AT1G79950
ArrayExpress:F4HQE2 Uniprot:F4HQE2
Length = 1040
Score = 171 (65.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
LL G WY +A RA+NQA+GR IRHR+D+GAI+ D RF + Q +S W+R V+
Sbjct: 695 LLSGSMWYSQEAARAVNQAIGRVIRHRHDYGAIIFCDDRFEQPSQQSKISLWIRPNVKCY 754
Query: 673 SSHNTFMENLRNFVR 687
S + + +L F R
Sbjct: 755 SRYGEVISDLARFFR 769
Score = 109 (43.4 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 19 FLKYSSCKILHL-QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
F Y S +I+++ +VI+ + LLESPTG+GKTL LLC+ LAW++
Sbjct: 60 FEAYQS-QIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRK 106
Score = 109 (43.4 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 271 FLKYSSCKILHL-QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 317
F Y S +I+++ +VI+ + LLESPTG+GKTL LLC+ LAW++
Sbjct: 60 FEAYQS-QIIYMDRVIESLQNKCHALLESPTGTGKTLCLLCATLAWRK 106
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 236 SYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+Y+I G+ VEFP +AY SQI M++V + H L
Sbjct: 48 NYSIRGINVEFPFEAYQSQIIYMDRVIESLQNKCHAL 84
>UNIPROTKB|D4ACH4 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR006935 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF04851 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781945 Ensembl:ENSRNOT00000029336 ArrayExpress:D4ACH4
Uniprot:D4ACH4
Length = 1165
Score = 162 (62.1 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WYQ QA RA+NQA+GR IRHR+D+GAI L D RF +++ L WVR ++
Sbjct: 677 LSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAHLPSWVRPYLKVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 737 NFGRVIRDVAQFFR 750
Score = 113 (44.8 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
+V++ K N +LESPTG+GKTL LLC+ LAW+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKIAERVQ 77
Score = 113 (44.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
+V++ K N +LESPTG+GKTL LLC+ LAW+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKIAERVQ 77
Score = 53 (23.7 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
+ GV V+FP + YP Q M +V
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKV 28
>UNIPROTKB|J9NWQ1 [details] [associations]
symbol:J9NWQ1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03027048 Ensembl:ENSCAFT00000030398 Uniprot:J9NWQ1
Length = 131
Score = 200 (75.5 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 45/75 (60%), Positives = 53/75 (70%)
Query: 111 KKPATKKK--P-LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK P + EVVTR YTI +HK +H V FKKRA RA+K +R F K+MGT DV I
Sbjct: 5 KKGGEKKKGCPAIKEVVTRKYTISIHKPVHGVDFKKRALRALKEIRKFATKEMGTPDVCI 64
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK + +KGI N
Sbjct: 65 DTRLNKAVRAKGIMN 79
>RGD|1306721 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0000723 "telomere
maintenance" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR006935
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF04851 Pfam:PF06733
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 RGD:1306721 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:CH474066
HOGENOM:HOG000007558 KO:K11136 CTD:51750 OrthoDB:EOG412M4Q
EMBL:BC086436 IPI:IPI00781945 IPI:IPI00782143 RefSeq:NP_001178786.1
UniGene:Rn.98315 PRIDE:Q5RJZ1 GeneID:362288 KEGG:rno:362288
UCSC:RGD:1306721 NextBio:679364 ArrayExpress:Q5RJZ1
Genevestigator:Q5RJZ1 Uniprot:Q5RJZ1
Length = 1274
Score = 162 (62.1 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WYQ QA RA+NQA+GR IRHR+D+GAI L D RF +++ L WVR ++
Sbjct: 677 LSGQEWYQQQASRAVNQAIGRVIRHRHDYGAIFLCDHRFAYADARAHLPSWVRPYLKVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 737 NFGRVIRDVAQFFR 750
Score = 113 (44.8 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
+V++ K N +LESPTG+GKTL LLC+ LAW+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKIAERVQ 77
Score = 113 (44.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 81
+V++ K N +LESPTG+GKTL LLC+ LAW+ ++ V +R Q
Sbjct: 27 KVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREHLRDAVSSLKIAERVQ 77
Score = 53 (23.7 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQV 261
+ GV V+FP + YP Q M +V
Sbjct: 6 LNGVTVDFPFQPYPCQQEYMTKV 28
>UNIPROTKB|Q7QEI1 [details] [associations]
symbol:AGAP000634 "Regulator of telomere elongation
helicase 1 homolog" species:7165 "Anopheles gambiae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:AAAB01008847 HOGENOM:HOG000007558 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_311162.5 GeneID:1272449 KEGG:aga:AgaP_AGAP000634
VectorBase:AGAP000634 CTD:1272449 PhylomeDB:Q7QEI1 Uniprot:Q7QEI1
Length = 991
Score = 172 (65.6 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 613 LLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNT 672
L+ G DWY ++A RA+NQA+GR IRH+ D+GAILL D RF + Q LS W+ + ++ +
Sbjct: 675 LITGNDWYSLEASRAVNQAIGRVIRHKDDYGAILLCDSRFQNARQQAQLSAWIHSHLRES 734
Query: 673 SSHNTF 678
S+ F
Sbjct: 735 SAVPNF 740
Score = 103 (41.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 9 FKTYLNEPNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAW 63
F+ Y + NY K C LQ NK N +LESPTG+GKTL+LLCS +AW
Sbjct: 15 FEPYELQKNYMAKVIEC----LQ-----NKT-NGVLESPTGTGKTLSLLCSSMAW 59
Score = 100 (40.3 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 271 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAW 315
F Y K +VI+ N +LESPTG+GKTL+LLCS +AW
Sbjct: 15 FEPYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAW 59
Score = 48 (22.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 237 YTIGGVKVEFPVKAYPSQISMMNQV 261
Y I G+ V FP + Y Q + M +V
Sbjct: 4 YMINGIPVNFPFEPYELQKNYMAKV 28
>RGD|1595614 [details] [associations]
symbol:LOC678801 "similar to ribosomal protein L31"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 RGD:1595614
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10
InterPro:IPR023621 PANTHER:PTHR10956 SUPFAM:SSF54575
IPI:IPI00558790 Ensembl:ENSRNOT00000048390 Uniprot:F1LYW6
Length = 120
Score = 196 (74.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
+N V+TR+Y I++HK H V FKK APRA+K + F K+MGT DV IDTRLNK +W+KG
Sbjct: 16 INRVMTREYIINIHKCTHGVSFKKFAPRALKEIWKFAMKEMGTPDVCIDTRLNKAVWAKG 75
Query: 180 INN 182
I N
Sbjct: 76 IRN 78
>UNIPROTKB|E2RNA5 [details] [associations]
symbol:E2RNA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03011261 ProteinModelPortal:E2RNA5
Ensembl:ENSCAFT00000007009 NextBio:20857692 Uniprot:E2RNA5
Length = 124
Score = 194 (73.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 112 KPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRL 171
K + +NE VTR+YTI++HKR+ VGFKKR P A++ + +K +MGT DV I+TRL
Sbjct: 9 KKREARSAINEAVTREYTINIHKRICGVGFKKRVPWALRDLEICMK-EMGTPDVCINTRL 67
Query: 172 NKHIWSKGINNHTLGTAYFDSAAKCHKEMRYRNRVVKLTGF 212
NK +W+KGI N + + KC+++ N++ L +
Sbjct: 68 NKAVWAKGIRNSPY-CIHVQVSRKCNEDEDSLNKLYTLVTY 107
>WB|WBGene00009124 [details] [associations]
symbol:rtel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:Z79754 KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224
PIR:T21356 RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 158 (60.7 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 618 DWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNT 677
DWYQ++A+RA+NQA+GR +RH+ D+G ++L+D R+ S + KW+RN + + +
Sbjct: 698 DWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYASAKPEM-FPKWLRNTISRSDTDGC 756
Query: 678 FMENLRNFVRRRMEIQLEE-ERVKR 701
++ R F R I+ + E +K+
Sbjct: 757 ALKTSRFFKERGHLIENSKTEYIKK 781
Score = 120 (47.3 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 27/74 (36%), Positives = 47/74 (63%)
Query: 1 MTKKSSDIFKTYLNEPNYFLKYS----SCKILHLQ-VIQGCNKAKNCLLESPTGSGKTLA 55
M K+S+ + ++N P +K+ C+ + ++ V+ ++ + LESPTG+GKTL+
Sbjct: 1 MPPKASNSTEVWIN-PKLSVKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLS 59
Query: 56 LLCSVLAWQRKEKE 69
LLCS LAW +++KE
Sbjct: 60 LLCSTLAWVQRQKE 73
Score = 116 (45.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 271 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 321
F Y +I V+ ++ + LESPTG+GKTL+LLCS LAW +++KE
Sbjct: 23 FEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKE 73
Score = 40 (19.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 470 YHVCMESSVA-FDQLIQLDLMLDEHLNPYVLKVKDTPCIEDLEQ 512
Y + +++S+ FD+ L+ + + + + + CIE+L++
Sbjct: 239 YKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALCIEELKK 282
Score = 37 (18.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 230 KPSAATSYTIGG-VKVEFPVKAYPSQISMMNQVSNLFEQ 267
K S +T I + V+FP + Y Q M V ++ ++
Sbjct: 4 KASNSTEVWINPKLSVKFPFEPYECQRIFMKNVVDVLDR 42
>UNIPROTKB|Q93575 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005634
"nucleus" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IGI] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:Z79754
KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224 PIR:T21356
RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 158 (60.7 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 618 DWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNT 677
DWYQ++A+RA+NQA+GR +RH+ D+G ++L+D R+ S + KW+RN + + +
Sbjct: 698 DWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYASAKPEM-FPKWLRNTISRSDTDGC 756
Query: 678 FMENLRNFVRRRMEIQLEE-ERVKR 701
++ R F R I+ + E +K+
Sbjct: 757 ALKTSRFFKERGHLIENSKTEYIKK 781
Score = 120 (47.3 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 27/74 (36%), Positives = 47/74 (63%)
Query: 1 MTKKSSDIFKTYLNEPNYFLKYS----SCKILHLQ-VIQGCNKAKNCLLESPTGSGKTLA 55
M K+S+ + ++N P +K+ C+ + ++ V+ ++ + LESPTG+GKTL+
Sbjct: 1 MPPKASNSTEVWIN-PKLSVKFPFEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLS 59
Query: 56 LLCSVLAWQRKEKE 69
LLCS LAW +++KE
Sbjct: 60 LLCSTLAWVQRQKE 73
Score = 116 (45.9 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 271 FLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKE 321
F Y +I V+ ++ + LESPTG+GKTL+LLCS LAW +++KE
Sbjct: 23 FEPYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKE 73
Score = 40 (19.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 470 YHVCMESSVA-FDQLIQLDLMLDEHLNPYVLKVKDTPCIEDLEQ 512
Y + +++S+ FD+ L+ + + + + + CIE+L++
Sbjct: 239 YKLDLKNSIVIFDEAHNLESICESNASAELTSTSIALCIEELKK 282
Score = 37 (18.1 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 230 KPSAATSYTIGG-VKVEFPVKAYPSQISMMNQVSNLFEQ 267
K S +T I + V+FP + Y Q M V ++ ++
Sbjct: 4 KASNSTEVWINPKLSVKFPFEPYECQRIFMKNVVDVLDR 42
>UNIPROTKB|J9P6A0 [details] [associations]
symbol:J9P6A0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03013524 Ensembl:ENSCAFT00000008631 OMA:DYSINIH
Uniprot:J9P6A0
Length = 120
Score = 191 (72.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 116 KKKP-LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKH 174
K +P +NEVVT I++HK +H VGFKK AP A++ +R F K+MGT DV IDTRLNK
Sbjct: 11 KGRPAINEVVT----INIHKHIHGVGFKKCAPWALREIRKFAMKEMGTPDVHIDTRLNKV 66
Query: 175 IWSKGINN 182
+W+KGI+N
Sbjct: 67 VWAKGISN 74
>UNIPROTKB|Q9NZ71 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IMP] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 EMBL:CH471077 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
EMBL:AF217796 GO:GO:0000723 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 EMBL:AL353715 KO:K11136 CTD:51750
OrthoDB:EOG412M4Q EMBL:AF217795 EMBL:AB029011 EMBL:AK000485
EMBL:AK302508 EMBL:AK299332 EMBL:AK304798 EMBL:AL080127
IPI:IPI00219849 IPI:IPI00413900 IPI:IPI00718800 IPI:IPI00745153
IPI:IPI00929254 IPI:IPI00929311 IPI:IPI00929712 IPI:IPI00929751
PIR:T12516 PIR:T45294 RefSeq:NP_057518.1 RefSeq:NP_116575.3
UniGene:Hs.434878 ProteinModelPortal:Q9NZ71 SMR:Q9NZ71
IntAct:Q9NZ71 STRING:Q9NZ71 PhosphoSite:Q9NZ71 DMDM:229462743
PaxDb:Q9NZ71 PRIDE:Q9NZ71 GeneID:51750 KEGG:hsa:51750
UCSC:uc002yfu.2 UCSC:uc002yfx.1 UCSC:uc011abd.2 UCSC:uc021wge.1
GeneCards:GC20P062289 HGNC:HGNC:15888 MIM:608833 neXtProt:NX_Q9NZ71
PharmGKB:PA134915625 HOVERGEN:HBG108423 InParanoid:Q9NZ71
GenomeRNAi:51750 NextBio:55835 ArrayExpress:Q9NZ71 Bgee:Q9NZ71
Genevestigator:Q9NZ71 GermOnline:ENSG00000026036 Uniprot:Q9NZ71
Length = 1219
Score = 157 (60.3 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WY+ QA RA+NQA+GR IRHR D+GA+ L D RF +++ L WVR V+
Sbjct: 677 LSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 737 NFGHVIRDVAQFFR 750
Score = 114 (45.2 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
+R Q + P R L
Sbjct: 74 ERAQG-ELFPDRAL 86
Score = 112 (44.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 78 QRTQ 81
+R Q
Sbjct: 74 ERAQ 77
Score = 49 (22.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQ 267
+ GV V+FP + Y Q M +V +Q
Sbjct: 6 LNGVTVDFPFQPYKCQQEYMTKVLECLQQ 34
>UNIPROTKB|F6WH68 [details] [associations]
symbol:RTEL1 "Protein RTEL1-TNFRSF6B" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 EMBL:AL121845
TIGRFAMs:TIGR00604 EMBL:AL353715 HGNC:HGNC:15888 OMA:VLKMQFL
HGNC:HGNC:44095 IPI:IPI01021192 SMR:F6WH68 Ensembl:ENST00000318100
Ensembl:ENST00000482936 Uniprot:F6WH68
Length = 1400
Score = 157 (60.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WY+ QA RA+NQA+GR IRHR D+GA+ L D RF +++ L WVR V+
Sbjct: 677 LSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYD 736
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 737 NFGHVIRDVAQFFR 750
Score = 114 (45.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
+R Q + P R L
Sbjct: 74 ERAQG-ELFPDRAL 86
Score = 112 (44.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 78 QRTQ 81
+R Q
Sbjct: 74 ERAQ 77
Score = 49 (22.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQ 267
+ GV V+FP + Y Q M +V +Q
Sbjct: 6 LNGVTVDFPFQPYKCQQEYMTKVLECLQQ 34
>GENEDB_PFALCIPARUM|PFE0185c [details] [associations]
symbol:PFE0185c "60S ribosomal subunit protein
L31, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934 KO:K02910
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:NECEANE
ProtClustDB:CLSZ2447938 RefSeq:XP_001351596.1
ProteinModelPortal:Q8I463 SMR:Q8I463 IntAct:Q8I463
MINT:MINT-1563821 PRIDE:Q8I463 EnsemblProtists:PFE0185c:mRNA
GeneID:812922 KEGG:pfa:PFE0185c EuPathDB:PlasmoDB:PF3D7_0503800
Uniprot:Q8I463
Length = 120
Score = 185 (70.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 109 MVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
MVK K+K + VT+ TI++ K HKV +K++APRAIK +R+ K M T+DVR+D
Sbjct: 1 MVKGTVKKQKKTLKPVTKFITINLSKLTHKVCYKRKAPRAIKEIRSIAGKLMHTKDVRLD 60
Query: 169 TRLNKHIWSKGINN 182
+LNK IWSKG+ N
Sbjct: 61 VKLNKFIWSKGVRN 74
>UNIPROTKB|Q8I463 [details] [associations]
symbol:PFE0185c "60S ribosomal protein L31, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000054
InterPro:IPR020052 Pfam:PF01198 ProDom:PD006030 PROSITE:PS01144
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934 KO:K02910
HOGENOM:HOG000216660 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OMA:NECEANE
ProtClustDB:CLSZ2447938 RefSeq:XP_001351596.1
ProteinModelPortal:Q8I463 SMR:Q8I463 IntAct:Q8I463
MINT:MINT-1563821 PRIDE:Q8I463 EnsemblProtists:PFE0185c:mRNA
GeneID:812922 KEGG:pfa:PFE0185c EuPathDB:PlasmoDB:PF3D7_0503800
Uniprot:Q8I463
Length = 120
Score = 185 (70.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 109 MVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
MVK K+K + VT+ TI++ K HKV +K++APRAIK +R+ K M T+DVR+D
Sbjct: 1 MVKGTVKKQKKTLKPVTKFITINLSKLTHKVCYKRKAPRAIKEIRSIAGKLMHTKDVRLD 60
Query: 169 TRLNKHIWSKGINN 182
+LNK IWSKG+ N
Sbjct: 61 VKLNKFIWSKGVRN 74
>UNIPROTKB|Q5RE34 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9601 "Pongo abelii" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136 CTD:51750 EMBL:CR857704
RefSeq:NP_001124929.1 UniGene:Pab.2365 ProteinModelPortal:Q5RE34
GeneID:100171800 KEGG:pon:100171800 Uniprot:Q5RE34
Length = 1302
Score = 157 (60.3 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
L G +WY+ QA RA+NQA+GR IRHR D+GA+ L D RF +++ L WVR V+
Sbjct: 678 LSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYD 737
Query: 674 SHNTFMENLRNFVR 687
+ + ++ F R
Sbjct: 738 NFGHVIRDVAQFFR 751
Score = 105 (42.0 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LES TG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
+R Q + P R L
Sbjct: 74 ERVQG-ELFPDRAL 86
Score = 103 (41.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LES TG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 78 QRTQ 81
+R Q
Sbjct: 74 ERVQ 77
Score = 49 (22.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQ 267
+ GV V+FP + Y Q M +V +Q
Sbjct: 6 LNGVTVDFPFQPYKCQQEYMTKVLECLQQ 34
>UNIPROTKB|L7N0P2 [details] [associations]
symbol:L7N0P2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] GeneTree:ENSGT00390000005200
EMBL:AAEX03003049 Ensembl:ENSCAFT00000028058 Uniprot:L7N0P2
Length = 121
Score = 177 (67.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 30/61 (49%), Positives = 47/61 (77%)
Query: 122 EVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKGIN 181
+VVT+++T+ +H+ +H+VGF+K AP A+K ++ F K+MG DV DT+LNK +W+KGI
Sbjct: 15 KVVTKEHTVDIHECIHRVGFEKHAPWALKKIQKFAMKEMGIPDVCTDTKLNKAVWAKGIR 74
Query: 182 N 182
N
Sbjct: 75 N 75
>UNIPROTKB|J9PA67 [details] [associations]
symbol:J9PA67 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03007541 Ensembl:ENSCAFT00000004686 OMA:TINIHKP
Uniprot:J9PA67
Length = 127
Score = 174 (66.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 38/75 (50%), Positives = 48/75 (64%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK +NEVVTR+YTI++HK GF++ P + + F K+MGT DV I
Sbjct: 5 KKGGEKKKGRSAINEVVTREYTINIHKPWS--GFQEACPSGTQRFQKFAMKEMGTPDVHI 62
Query: 168 DTRLNKHIWSKGINN 182
DTRLNK +W KGI N
Sbjct: 63 DTRLNKAVWVKGIRN 77
>UNIPROTKB|D4ACA9 [details] [associations]
symbol:D4ACA9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
OrthoDB:EOG4R5047 IPI:IPI00388075 Ensembl:ENSRNOT00000002177
Uniprot:D4ACA9
Length = 99
Score = 172 (65.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 111 KKPATKKK---PLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRI 167
KK KKK ++EVVTR+YTI++HK H VGFKK RA+K + F K+MG+ DV I
Sbjct: 5 KKGGEKKKGCSAISEVVTREYTINIHKCTHGVGFKKCVARALKEIWKFAMKEMGSPDVYI 64
Query: 168 DTRLNKH 174
DTRL KH
Sbjct: 65 DTRLRKH 71
>UNIPROTKB|D4A6L8 [details] [associations]
symbol:D4A6L8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 OrthoDB:EOG4R5047 IPI:IPI00391676
Ensembl:ENSRNOT00000033462 Uniprot:D4A6L8
Length = 116
Score = 171 (65.3 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 111 KKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRID 168
KK KK +NE+VTR+YTI++HKR+H+VGFK AP A+K + F K MGT V D
Sbjct: 5 KKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPGVCND 64
Query: 169 TRLNKHI 175
TRLNK I
Sbjct: 65 TRLNKDI 71
>UNIPROTKB|D6RA96 [details] [associations]
symbol:RTEL1-TNFRSF6B "Protein RTEL1-TNFRSF6B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 EMBL:AL121845 EMBL:AL353715
HOGENOM:HOG000007558 ProteinModelPortal:D6RA96 SMR:D6RA96
Ensembl:ENST00000492259 HGNC:HGNC:44095 ArrayExpress:D6RA96
Bgee:D6RA96 Uniprot:D6RA96
Length = 785
Score = 126 (49.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQR 651
L G +WY+ QA RA+NQA+GR IRHR D+GA+ L D R
Sbjct: 705 LSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHR 742
Score = 114 (45.2 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 271 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 329
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 330 QRTQDLQKIPFRKL 343
+R Q + P R L
Sbjct: 74 ERAQG-ELFPDRAL 86
Score = 112 (44.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 19 FLKYSSCKILHLQVIQGCNKAK-NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFE 77
F Y C+ ++ + C + K N +LESPTG+GKTL LLC+ LAW+ ++ + +
Sbjct: 15 FQPYK-CQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREHLRDGISARKIA 73
Query: 78 QRTQ 81
+R Q
Sbjct: 74 ERAQ 77
Score = 49 (22.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFEQ 267
+ GV V+FP + Y Q M +V +Q
Sbjct: 6 LNGVTVDFPFQPYKCQQEYMTKVLECLQQ 34
>UNIPROTKB|J9NVK7 [details] [associations]
symbol:J9NVK7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03008646 Ensembl:ENSCAFT00000048606 OMA:NEDEYSP
Uniprot:J9NVK7
Length = 116
Score = 152 (58.6 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 116 KKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHI 175
++ P V RD IH VGF+KRAPRA++ + F K+MGT DV IDTR++K +
Sbjct: 9 ERLPQKRVARRDKHIHWD-----VGFEKRAPRALREIPKFAVKEMGTPDVCIDTRVSKAV 63
Query: 176 WSKGINN 182
W+KGI N
Sbjct: 64 WAKGIRN 70
>UNIPROTKB|G3N023 [details] [associations]
symbol:G3N023 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000054 Pfam:PF01198 ProDom:PD006030 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:DAAA02026485 Ensembl:ENSBTAT00000066082 OMA:NIHESIH
Uniprot:G3N023
Length = 92
Score = 145 (56.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 108 TMVKKPATKK--KPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDV 165
T KK A KK +NEVVTR+YTI++HK +H +G K + I+ R Q GT DV
Sbjct: 2 TPAKKGAEKKGWSTINEVVTREYTINIHKHIHGMGSKNCTLQGIQ--RNPEICQEGTPDV 59
Query: 166 RIDTRLNKHIWSKGINN 182
DTR++K +W+KG N
Sbjct: 60 YTDTRISKAVWAKGKRN 76
>CGD|CAL0004313 [details] [associations]
symbol:orf19.2000 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007535
"donor selection" evidence=IEA] [GO:0045910 "negative regulation of
DNA recombination" evidence=IEA] [GO:0006270 "DNA replication
initiation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0007049
GO:GO:0004003 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719450.1 RefSeq:XP_719578.1 ProteinModelPortal:Q5AD67
STRING:Q5AD67 GeneID:3638692 GeneID:3638794 KEGG:cal:CaO19.2000
KEGG:cal:CaO19.9551 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 Uniprot:Q5AD67
Length = 842
Score = 131 (51.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 615 KGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSS 674
K ++Y+ RA+NQ++GR IRH D+ I LVD+RF + Q LS+WV+ ++ T++
Sbjct: 761 KSRNYYENLCMRAVNQSIGRSIRHINDYSIIYLVDRRFSTPRIQNKLSQWVKERISITTT 820
Query: 675 HN 676
+N
Sbjct: 821 NN 822
Score = 89 (36.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 31/117 (26%), Positives = 53/117 (45%)
Query: 289 NKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKIPFRKLKISRL 348
N K L ESPTG+GKTL+++CS + W R K +D+ + + + +
Sbjct: 33 NGYKIGLFESPTGTGKTLSIICSSMTWLRTFKRNNTFLETNNEVEDVYESESEEDEPEWV 92
Query: 349 K-AKDFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKLKVLNGRSKNLVSSID 404
K A S N + +L+ +++ E E Q+ +K ++KV R + D
Sbjct: 93 KKAYQSSIVNRSKNKLIEYEHYLDKIEKEHAQNKRKEEELEIKVHKRRKAMTAAGTD 149
Score = 86 (35.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 37 NKAKNCLLESPTGSGKTLALLCSVLAWQRKEK 68
N K L ESPTG+GKTL+++CS + W R K
Sbjct: 33 NGYKIGLFESPTGTGKTLSIICSSMTWLRTFK 64
>FB|FBgn0026876 [details] [associations]
symbol:CG11403 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
EMBL:AE014298 GO:GO:0006200 GO:GO:0004003 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199 KO:K11273
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 EMBL:AL121806 EMBL:AY058540
RefSeq:NP_569898.1 UniGene:Dm.4169 SMR:Q9XZS9 STRING:Q9XZS9
EnsemblMetazoa:FBtr0070245 GeneID:31072 KEGG:dme:Dmel_CG11403
UCSC:CG11403-RA FlyBase:FBgn0026876 InParanoid:Q9XZS9
OrthoDB:EOG4Q83CB GenomeRNAi:31072 NextBio:771801 Uniprot:Q9XZS9
Length = 861
Score = 112 (44.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQ-R--TQDLQKIP 339
++ Q + + + ESPTG+GK+L L C L W + +ELV+ +M + R Q+L K+
Sbjct: 34 ELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTEMLARIRGVEQELAKLK 93
Query: 340 FRKLKISR-LKAKDFSTNNGME----QQLLTCITTINQQEDELRQSTKKTRVDKLKVLNG 394
+ S L+++ S E Q L + QQ D++R+ KK + +V G
Sbjct: 94 EESEQSSNWLESQGKSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAKKHKRQG-RVHPG 152
Query: 395 RSKNLVSSID 404
+ + L +D
Sbjct: 153 KLEELEKDLD 162
Score = 108 (43.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 616 GGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSH 675
G ++Y+ +A+NQ +GR +RH D+ + L+D+RF + L KW+ + ++
Sbjct: 784 GNEYYENLCVKAVNQCIGRAVRHIKDYACVYLLDKRFADPKIRGKLPKWISRHIVEANAA 843
Query: 676 N 676
N
Sbjct: 844 N 844
Score = 93 (37.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKM 75
++ Q + + + ESPTG+GK+L L C L W + +ELV+ +M
Sbjct: 34 ELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTEM 78
>WB|WBGene00010839 [details] [associations]
symbol:chl-1 species:6239 "Caenorhabditis elegans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0003677 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 HOGENOM:HOG000241266
OMA:NLGRCVV GeneTree:ENSGT00530000063199 EMBL:Z49128
RefSeq:NP_499295.2 ProteinModelPortal:Q21489 SMR:Q21489
STRING:Q21489 PaxDb:Q21489 EnsemblMetazoa:M03C11.2 GeneID:176457
KEGG:cel:CELE_M03C11.2 UCSC:M03C11.2 CTD:176457 WormBase:M03C11.2
InParanoid:Q21489 NextBio:892664 Uniprot:Q21489
Length = 830
Score = 123 (48.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 611 TGLLKGGDW-YQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQV 669
T + GG+ Y+ A+NQA+GR IRHR D+ A+ L D R+ +++++ LS W+ ++
Sbjct: 748 TQMPNGGNLLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYAKESTRRKLSTWIGDRT 807
Query: 670 QNTSSHNTFMENLRNF 685
Q + R+F
Sbjct: 808 QVKLGFGEIIRKTRSF 823
Score = 84 (34.6 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 30 LQVIQGC-NKAKNCLLESPTGSGKTLALLCSVLAWQRKEK 68
++ I+ C + K + ESPTG+GK+L++LCS + W E+
Sbjct: 18 MREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEE 57
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 282 LQVIQGC-NKAKNCLLESPTGSGKTLALLCSVLAWQRKEK 320
++ I+ C + K + ESPTG+GK+L++LCS + W E+
Sbjct: 18 MREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEE 57
Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 33/141 (23%), Positives = 54/141 (38%)
Query: 105 ISDTMVKKPATKKKPLNEVVTRDYTIHMHKRL--HKVGFKKRAPRAIKVVRAFVKKQMGT 162
IS + +TK L + R+Y H +L H + + K+ + F+ Q
Sbjct: 360 ISSLYSAEISTKSLTLALRLIREYNAHYKLKLLAHNLLYMKQLESLTSKMLIFLNSQ-SK 418
Query: 163 EDVRIDTRLNKHIWSKGINNHTLGTAYFDSAAKCHK-----------EMRYRNRVVKLTG 211
EDV +L +++ IN L Y + C K E++ N KLTG
Sbjct: 419 EDVMTMAQLARNLNILEINLFKLAE-YMEKTDLCKKFHGFYMRLQKEEIKKENEKPKLTG 477
Query: 212 FDQLIGESAVLPSVK-DKLKP 231
+L+ P + + L P
Sbjct: 478 IQKLMAAKEAEPEPEAEPLPP 498
>POMBASE|SPAC3G6.11 [details] [associations]
symbol:chl1 "ATP-dependent DNA helicase Chl1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=NAS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 PomBase:SPAC3G6.11 INTERPRO:IPR013020 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0006342 GO:GO:0007064
GO:GO:0045910 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 PIR:T38730 RefSeq:NP_594977.1
ProteinModelPortal:O14147 STRING:O14147 EnsemblFungi:SPAC3G6.11.1
GeneID:2543118 KEGG:spo:SPAC3G6.11 HOGENOM:HOG000241266 OMA:NLGRCVV
OrthoDB:EOG408RH6 NextBio:20804145 Uniprot:O14147
Length = 844
Score = 125 (49.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 618 DWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNT 677
++Y+ RA+NQ++GR IRHR D+ +I+L+D R+ + Q+ L W+ + ++ +
Sbjct: 769 EFYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSIQRKLPNWLSKNIHSSPNFGP 828
Query: 678 FMENLRNFVRRR 689
+ L F R +
Sbjct: 829 AIRQLATFFRAK 840
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 295 LLESPTGSGKTLALLCSVLAWQRKEKELV---QQKMFEQRTQDLQKIPF----RKLKISR 347
+ ESPTG+GK+L+L+C+ L W + ++ +K + ++ KIP + LKI +
Sbjct: 41 IFESPTGTGKSLSLICASLTWLDEHGGVLLEDNEKSNDNKSNTSSKIPDWVLEQDLKIQK 100
Query: 348 LKAKDFSTNNGMEQQLLTCITTINQ-QEDEL-RQSTKKTRVDKLKVLNGRSK------NL 399
K+ T+ +EQ+L I NQ +++++ ST R K + +N + N
Sbjct: 101 DLVKE--THARLEQRLEE-IRKRNQSRKNQMSNNSTTYHRETKRRNINAEASTSDNCNNS 157
Query: 400 VSSIDFILGLLYKGIQTCITTINQQED 426
+S+D + L T +T Q ED
Sbjct: 158 NTSVDPMDEYLVTAEYTMPSTSEQSED 184
Score = 85 (35.0 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 31/122 (25%), Positives = 61/122 (50%)
Query: 9 FKTYLNEPN--YFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK 66
FKT + P Y ++ + L+ + G K + ESPTG+GK+L+L+C+ L W +
Sbjct: 9 FKTNFHHPYTPYDIQLEFMRSLYSSISDG----KIGIFESPTGTGKSLSLICASLTWLDE 64
Query: 67 EKELVQQKMFEQRTQDLQKTSFVFCGRSDFFLLFRERRISDTMVKKP-ATKKKPLNEVVT 125
++ + E+ + TS + ++L ++ +I +VK+ A ++ L E+
Sbjct: 65 HGGVLLEDN-EKSNDNKSNTS----SKIPDWVLEQDLKIQKDLVKETHARLEQRLEEIRK 119
Query: 126 RD 127
R+
Sbjct: 120 RN 121
Score = 37 (18.1 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 332 TQDLQKIPFRKLK-ISRLKAKDFSTNNGMEQQLLT 365
T+ + + ++L+ ++ L+++ FS NG E+ T
Sbjct: 473 TKYMHSLGTQELESLNDLRSERFSNGNGYEEDPYT 507
>UNIPROTKB|F1PNR3 [details] [associations]
symbol:F1PNR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000054
Pfam:PF01198 ProDom:PD006030 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.10.440.10 InterPro:IPR023621
PANTHER:PTHR10956 SUPFAM:SSF54575 GeneTree:ENSGT00390000005200
EMBL:AAEX03014297 Ensembl:ENSCAFT00000015324 Uniprot:F1PNR3
Length = 78
Score = 138 (53.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 119 PLN-EVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWS 177
P N EVVTR YTI +HK + +GFKK A A+ K+M + DV +T+LNK +W+
Sbjct: 9 PANKEVVTRKYTISIHKLIQGIGFKKHATWALD--SEICLKEMESPDVHFNTKLNKGVWA 66
Query: 178 KGINN 182
KG+++
Sbjct: 67 KGVSS 71
>SGD|S000005929 [details] [associations]
symbol:CHL1 "Probable DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007059 "chromosome segregation"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=ISS;IMP]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IGI;IMP;IPI]
[GO:0032508 "DNA duplex unwinding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IGI;IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0007535 "donor selection"
evidence=IGI;IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 SGD:S000005929
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006270 EMBL:Z71255 EMBL:BK006949 GO:GO:0004003 EMBL:Z48483
EMBL:U33335 GO:GO:0003678 GO:GO:0007064 GO:GO:0045910
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV OrthoDB:EOG408RH6 EMBL:X56584
PIR:S12499 RefSeq:NP_015317.1 ProteinModelPortal:P22516 SMR:P22516
DIP:DIP-4044N IntAct:P22516 MINT:MINT-526050 STRING:P22516
PaxDb:P22516 PeptideAtlas:P22516 EnsemblFungi:YPL008W GeneID:856099
KEGG:sce:YPL008W CYGD:YPL008w GeneTree:ENSGT00530000063199
NextBio:981143 Genevestigator:P22516 GermOnline:YPL008W
GO:GO:0007535 GO:GO:0036297 Uniprot:P22516
Length = 861
Score = 112 (44.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH D+ I L+D R+ N ++ LS+WV++ + + + + + + R F
Sbjct: 793 KAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSINSEHTTHQVISSTRKF 852
Query: 686 VRRR 689
R
Sbjct: 853 FSMR 856
Score = 103 (41.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 70/306 (22%), Positives = 124/306 (40%)
Query: 40 KNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQKTSFVFCGRSDFFLL 99
K +LESPTG+GKTL+L+C+ + W R K + +M + + + D+ +
Sbjct: 36 KIAILESPTGTGKTLSLICATMTWLRMNKADIFTRMETNIKTNEDDSENLSDDEPDWVID 95
Query: 100 FRERRISDTMVKKPATKKKPLNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQ 159
+ + V +K LNE+ T K+L + + K V KK+
Sbjct: 96 TYRKSVLQEKVDLLNDYEKHLNEINTTSC-----KQLKTMCDLDKEHGRYKSVDPLRKKR 150
Query: 160 MGTE--DVRIDTR--LNKHIWSKGINNHTL-GTAYFDSAAKCHKEMRYRNRVVKLTGFDQ 214
G DV ++ + + + S NN T T + K +K ++++ L D+
Sbjct: 151 KGARHLDVSLEEQDFIPRPYESDSENNDTSKSTRGGRISDKDYKLSELNSQIITL--LDK 208
Query: 215 LIGESAVLPSVKDKLKPSAATSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL-K 273
+ G+ + P+ D+ T+ VK+ + + Y SQ+ L P+ F K
Sbjct: 209 IDGKVSRDPNNGDRFD---VTNQN--PVKIYYASRTY-SQLGQFTSQLRLPSFPSSFRDK 262
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ 333
K+ +L + +K + C+ KTL + A R KE +F Q T
Sbjct: 263 VPDEKVKYLPL---ASKKQLCI-NPKVMKWKTLEAINDACADLRHSKEGC---IFYQNTN 315
Query: 334 DLQKIP 339
+ + P
Sbjct: 316 EWRHCP 321
>ZFIN|ZDB-GENE-041114-191 [details] [associations]
symbol:ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box
helicase 11" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-041114-191 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC085645 IPI:IPI00501779 RefSeq:NP_001007320.1
UniGene:Dr.37620 ProteinModelPortal:Q5U399 STRING:Q5U399
GeneID:492353 KEGG:dre:492353 InParanoid:Q5U399 NextBio:20864919
ArrayExpress:Q5U399 Uniprot:Q5U399
Length = 890
Score = 113 (44.8 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTF 678
+A+NQ++GR IRHR D+ I+L D R+ + Q L +W+R+ +T +H TF
Sbjct: 821 KAVNQSIGRAIRHRGDYACIVLCDHRYARTGTLQKLPEWIRS---STHTHATF 870
Score = 98 (39.6 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 43 LLESPTGSGKTLALLCSVLAWQRKEKELVQQ---KMFE-QRTQDLQKTSFVFCG--RSDF 96
+ ESPTG+GK+L+L+C L W R +E +Q ++ E Q+ D+ K G D+
Sbjct: 36 IFESPTGTGKSLSLICGALTWLRDYEEQRKQEAARLLEGQKDSDVVKEKNSNSGPPEPDW 95
Query: 97 FLLFRERRISDTMVKKPATKKKPLNEVVTRDYTIHM--HKRLHKVGFKKRAPRAIKVVRA 154
F +++ MV K K + L R+ + M H + K++A + V+
Sbjct: 96 VSEFVQKKAERDMVNK--LKDEELKRK-KREERLEMIRHNAQLRYAMKRKADEDDEAVKL 152
Query: 155 FVKKQMGTE 163
+ G+E
Sbjct: 153 LQLSREGSE 161
Score = 88 (36.0 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 295 LLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQDLQK 337
+ ESPTG+GK+L+L+C L W R +E Q+K R + QK
Sbjct: 36 IFESPTGTGKSLSLICGALTWLRDYEE--QRKQEAARLLEGQK 76
Score = 47 (21.6 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 240 GGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFLKYSSCKILHLQVIQGCNKAKNCLLE-S 298
GGV FP Y +I + + + ++ K QV Q ++ C+ S
Sbjct: 684 GGVVCFFPSYEYEKRILGHWESTGILQRLQSKKKIFQEPKKASQVEQVLSEYSKCIQRCS 743
Query: 299 PTGSGKTLALLCSVLAWQRKE 319
G G+T ALL SV+ + E
Sbjct: 744 NIGGGQTGALLFSVVGGKMSE 764
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 246 FPVKAYPSQISMMNQVSNLFEQ 267
FP + YP Q S M + +Q
Sbjct: 10 FPFQPYPIQESFMEALYTALDQ 31
>UNIPROTKB|E1BL06 [details] [associations]
symbol:E1BL06 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030496 "midbody" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0003677 GO:GO:0000790 GO:GO:0004003 GO:GO:0030496
GO:GO:0000922 InterPro:IPR014001 SMART:SM00487
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:DAAA02014574
EMBL:DAAA02014575 EMBL:DAAA02014576 EMBL:DAAA02014577
IPI:IPI00707607 Ensembl:ENSBTAT00000009329 Uniprot:E1BL06
Length = 913
Score = 123 (48.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +I+L+DQR+ S Q L W+R++V+ ++ LR F
Sbjct: 846 KAVNQSIGRAIRHQKDFASIVLLDQRYASPAIQAKLPAWIRDRVEVKATFGPAFAALRKF 905
Query: 686 VRRR 689
R +
Sbjct: 906 HREK 909
Score = 90 (36.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 268 PNHFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKM 327
P F Y+ K + Q K + ESPTG+GK+L+L+C L+W R ++ +Q+
Sbjct: 14 PFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKRQE- 72
Query: 328 FEQR 331
E+R
Sbjct: 73 -EER 75
Score = 89 (36.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 16 PNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKM 75
P F Y+ K + Q K + ESPTG+GK+L+L+C L+W R ++ +Q+
Sbjct: 14 PFPFTPYAIQKDFMAALYQVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKRQE- 72
Query: 76 FEQR 79
E+R
Sbjct: 73 -EER 75
Score = 41 (19.5 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 317 RKEKELVQQKMFEQRTQDLQKIPFRKLKISRLKAKDFST 355
R ++E V++K E+R Q ++ + R++ +D T
Sbjct: 129 RLKEEQVRRKKREERLQQIRHNAKLRFAAKRMRQEDEET 167
>UNIPROTKB|J3KS24 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR014013 PROSITE:PS51193
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
GO:GO:0016817 Ensembl:ENST00000577913 Uniprot:J3KS24
Length = 69
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 317
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 22 YPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 235 TSYTIGGVKVEFPVKAYPSQISMMNQVSNLFEQPNHFL 272
+ YTIGGVK+ FP KAYPSQ++MMN + H L
Sbjct: 6 SEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCL 43
>UNIPROTKB|E2RGR5 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030496 "midbody" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AAEX03015316
Ensembl:ENSCAFT00000024894 Uniprot:E2RGR5
Length = 908
Score = 114 (45.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +I+L+DQR+ + L W+R++V+ ++ +R F
Sbjct: 841 KAVNQSIGRAIRHQKDFASIVLLDQRYARPPILEKLPAWIRDRVEVRATFGPAFATMRKF 900
Query: 686 VRRR 689
R +
Sbjct: 901 HREK 904
Score = 91 (37.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 1 MTKKSSDIFKTYLNEPNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSV 60
M+ K+ +I + P F YS K ++ + K + ESPTG+GK+L+++C
Sbjct: 1 MSNKTQEIGDIHFPFP--FTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSVICGA 58
Query: 61 LAWQRKEKELVQQK 74
L+W R ++ Q+
Sbjct: 59 LSWLRDFEQKKHQE 72
Score = 87 (35.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 268 PNHFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQK 326
P F YS K ++ + K + ESPTG+GK+L+++C L+W R ++ Q+
Sbjct: 14 PFPFTPYSIQKDFMAELYRVLEAGKIGIFESPTGTGKSLSVICGALSWLRDFEQKKHQE 72
>TAIR|locus:2017894 [details] [associations]
symbol:AT1G79890 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 EMBL:AC011717
UniGene:At.18069 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 HOGENOM:HOG000241266 OMA:NLGRCVV IPI:IPI00530666
PIR:A96830 RefSeq:NP_178107.1 UniGene:At.66890
ProteinModelPortal:Q9CA92 SMR:Q9CA92 STRING:Q9CA92 PaxDb:Q9CA92
PRIDE:Q9CA92 EnsemblPlants:AT1G79890.1 GeneID:844328
KEGG:ath:AT1G79890 TAIR:At1g79890 InParanoid:Q9CA92
PhylomeDB:Q9CA92 ProtClustDB:CLSN2681868 Genevestigator:Q9CA92
Uniprot:Q9CA92
Length = 882
Score = 109 (43.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 615 KGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFY---SKNSQQG-----LSKWVR 666
+G ++Y+ +A+NQ++GR IRH D+ +ILLVD R+ SK + L KW++
Sbjct: 788 RGKEYYENLCMKAVNQSIGRAIRHEKDYASILLVDARYSNDPSKRTSHSHPSNKLPKWIK 847
Query: 667 NQ-VQNTSSHNTFMENLRNFVRRR 689
++ + +T + L F + +
Sbjct: 848 DRLIYSTKGYGDVHRLLHQFFKHK 871
Score = 94 (38.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 11 TYLNE-PNYFLKYSSCKILHLQVI-QGCNKAKNCLLESPTGSGKTLALLCSVLAW--QRK 66
T + E P + K S +I + + Q +K +LESPTG+GK+L+++CS L W RK
Sbjct: 2 TEIREFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLTDRK 61
Query: 67 EK 68
EK
Sbjct: 62 EK 63
Score = 92 (37.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 286 QGCNKAKNCLLESPTGSGKTLALLCSVLAW--QRKEK 320
Q +K +LESPTG+GK+L+++CS L W RKEK
Sbjct: 27 QFLDKGGVSMLESPTGTGKSLSIICSALQWLTDRKEK 63
>RGD|1306675 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000922 "spindle pole" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 RGD:1306675
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677 GO:GO:0000790
GO:GO:0004003 GO:GO:0030496 GO:GO:0000922 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 GO:GO:0007062
OrthoDB:EOG4B5P4M IPI:IPI00765140 Ensembl:ENSRNOT00000016536
UCSC:RGD:1306675 Uniprot:D3ZT96
Length = 882
Score = 108 (43.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +I+L+D R+ + L W+R++V+ ++ +R F
Sbjct: 813 KAINQSIGRAIRHQKDFASIVLLDHRYARPSILAKLPAWIRDRVEVKATFGPAFAAMRKF 872
Query: 686 VRRR 689
R +
Sbjct: 873 HREK 876
Score = 84 (34.6 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 268 PNHFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR--KEKEL 322
P F Y K ++ + K + ESPTG+GK+L+L+C L+W R ++K+L
Sbjct: 14 PFPFPPYPIQKDFMAELYKVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKL 70
Score = 83 (34.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 43 LLESPTGSGKTLALLCSVLAWQR--KEKEL 70
+ ESPTG+GK+L+L+C L+W R ++K+L
Sbjct: 41 IFESPTGTGKSLSLICGALSWLRDFEQKKL 70
Score = 53 (23.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 22/87 (25%), Positives = 33/87 (37%)
Query: 267 QPNHFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCS--VLAWQRKEKELVQ 324
+ H K C H Q+ Q + + +SP G L L S L K L
Sbjct: 194 EEEHITKIYYCSRTHSQLAQFVREVQ----KSPFGKETRLVSLGSRQSLCVNEDVKSLGS 249
Query: 325 QKMFEQRTQDLQKIPFRKLKISRLKAK 351
+ R D+Q+ +K++I K K
Sbjct: 250 VHLMNDRCVDMQRRKHKKMRIGEDKPK 276
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 316 QRKEKELVQQKMFEQRTQDLQKIPFRKLKISRLKA 350
+++E++LV++ EQR ++ + +L L A
Sbjct: 119 KKEERDLVERLREEQRQEEEETETLLRLSREMLAA 153
>MGI|MGI:2443590 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030496 "midbody" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:2443590 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0003723 GO:GO:0000790 GO:GO:0004003
GO:GO:0004386 GO:GO:0030496 GO:GO:0000922 GO:GO:0008094
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV GeneTree:ENSGT00530000063199
GO:GO:0007062 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC079656 IPI:IPI00460651 RefSeq:NP_001003919.1
UniGene:Mm.259605 ProteinModelPortal:Q6AXC6 SMR:Q6AXC6
STRING:Q6AXC6 PhosphoSite:Q6AXC6 PRIDE:Q6AXC6
Ensembl:ENSMUST00000163605 GeneID:320209 KEGG:mmu:320209
UCSC:uc008dha.1 InParanoid:Q6AXC6 NextBio:396263 Bgee:Q6AXC6
Genevestigator:Q6AXC6 GermOnline:ENSMUSG00000035842 Uniprot:Q6AXC6
Length = 880
Score = 107 (42.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +I+L+D R+ + L W+R++V+ ++ +R F
Sbjct: 811 KAINQSIGRAIRHQRDFASIVLLDHRYARPSILAKLPAWIRDRVEVKATFGPAFAAVRKF 870
Query: 686 VRRR 689
R +
Sbjct: 871 HREK 874
Score = 87 (35.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 283 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK-EKELVQ 324
+V++G K + ESPTG+GK+L+L+C L+W R EK+ +Q
Sbjct: 32 KVLEG---GKIGIFESPTGTGKSLSLICGALSWLRDFEKKKLQ 71
Score = 87 (35.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 31 QVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRK-EKELVQ 72
+V++G K + ESPTG+GK+L+L+C L+W R EK+ +Q
Sbjct: 32 KVLEG---GKIGIFESPTGTGKSLSLICGALSWLRDFEKKKLQ 71
Score = 50 (22.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 239 IGGVKVEFPVKAYPSQISMMNQVSNLFE 266
IGG+ FP YP Q M ++ + E
Sbjct: 8 IGGIHFPFPFPPYPIQKDFMAELYKVLE 35
>UNIPROTKB|G3N0P1 [details] [associations]
symbol:G3N0P1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000054 Pfam:PF01198
ProDom:PD006030 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.10.440.10 InterPro:IPR023621 PANTHER:PTHR10956
SUPFAM:SSF54575 GeneTree:ENSGT00390000005200 EMBL:DAAA02045748
Ensembl:ENSBTAT00000063313 Uniprot:G3N0P1
Length = 118
Score = 117 (46.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 120 LNEVVTRDYTIHMHKRLHKVGFKKRAPRAIKVVRAFVKKQMGTEDVRIDTRLNKHIWSKG 179
+NEV R+ TI++HK H VGFKK AP A + F K G+ DV I TR ++ + +G
Sbjct: 14 INEVAARENTINIHKCTHGVGFKKHAPGACQETGKFTMKG-GSPDVCISTRPSRAVGQRG 72
Query: 180 INNHT 184
T
Sbjct: 73 AERPT 77
>ASPGD|ASPL0000038959 [details] [associations]
symbol:AN10414 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 EMBL:BN001306 GO:GO:0004003
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
EnsemblFungi:CADANIAT00009590 Uniprot:C8VHC2
Length = 841
Score = 123 (48.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 616 GGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSS- 674
G D+Y+ RA+NQ +GR IRHR D+ AI+L+D+R+ + + L W++ + S+
Sbjct: 761 GRDFYENACMRAVNQCIGRAIRHRNDYAAIVLIDKRYGKTSIEAKLPGWIKQSLVKDSAL 820
Query: 675 --HNTFMENLRNFVRRR 689
T ++ L F R +
Sbjct: 821 LPAATTLDGLACFFRSK 837
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 269 NH-FLKYSSCKILHLQVIQGC-NKAKNCLLESPTGSGKTLALL-CSVLAWQRKEKELVQQ 325
NH + Y ++ +Q + C + K + ESPTGSG L ++ S W R + +
Sbjct: 18 NHPYTPYD-IQVRFMQSLYECLEEGKVAIFESPTGSGPRLQIIELSCTDWTRNRDDDEPE 76
Query: 326 KMFE------QRTQDLQKIPFRKLKISRLKAKDFSTNNGME 360
M E R ++I F +++R+K ++ +E
Sbjct: 77 WMVEFAKREASRAVTEKRIEFES-RLARIKREEEQQRAALE 116
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 26 KILHLQVIQGC-NKAKNCLLESPTGSGKTLALL-CSVLAWQRKEKELVQQKMFE 77
++ +Q + C + K + ESPTGSG L ++ S W R + + M E
Sbjct: 27 QVRFMQSLYECLEEGKVAIFESPTGSGPRLQIIELSCTDWTRNRDDDEPEWMVE 80
>UNIPROTKB|A8MPP1 [details] [associations]
symbol:DDX11L8 "Putative ATP-dependent RNA helicase
DDX11-like protein 8" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0003723 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 EMBL:AC009533
IPI:IPI00872853 ProteinModelPortal:A8MPP1 SMR:A8MPP1 STRING:A8MPP1
PhosphoSite:A8MPP1 PaxDb:A8MPP1 PRIDE:A8MPP1 GeneCards:GC12M000095
HGNC:HGNC:37101 neXtProt:NX_A8MPP1 HOVERGEN:HBG058884
InParanoid:A8MPP1 OrthoDB:EOG4B5P4M Genevestigator:A8MPP1
Uniprot:A8MPP1
Length = 907
Score = 101 (40.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +I+L+DQR+ L W+R V+ ++ + ++ F
Sbjct: 840 KAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRASVEVKATFGPAIAAVQKF 899
Query: 686 VRRR 689
R +
Sbjct: 900 HREK 903
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/137 (24%), Positives = 61/137 (44%)
Query: 268 PNHFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR---KEKELVQ 324
P F YS + ++ + K + ESPTG+GK+L+L+C L+W R ++K +
Sbjct: 14 PFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEE 73
Query: 325 QKMFEQRTQDLQKIPFRKLKISR-LKAKDFSTNNGMEQQLLTCITTINQQED-----ELR 378
++ E T L L +S + + E +T ++ D ++
Sbjct: 74 ARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVDRLKVE 133
Query: 379 QSTKKTRVDKLKVLNGR 395
Q+ +K R ++L+ L R
Sbjct: 134 QARRKQREERLQQLQHR 150
Score = 86 (35.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 16 PNYFLKYSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR---KEKELVQ 72
P F YS + ++ + K + ESPTG+GK+L+L+C L+W R ++K +
Sbjct: 14 PFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKREEE 73
Query: 73 QKMFEQRTQDL 83
++ E T L
Sbjct: 74 ARLLETGTGPL 84
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 317 RKEKELVQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNN 357
R + E ++K E+R Q LQ K RL+ ++ T N
Sbjct: 129 RLKVEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETEN 169
>UNIPROTKB|I3LBL1 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 PROSITE:PS51193
GO:GO:0005524 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GeneTree:ENSGT00530000063199 EMBL:CU914462 EMBL:CU694840
Ensembl:ENSSSCT00000025154 OMA:TEAWDIE Uniprot:I3LBL1
Length = 709
Score = 134 (52.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 274 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 317
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 134 (52.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 22 YSSCKILHLQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQR 65
Y S + +++G N ++CLLESPTGSGK+LALLCS LAWQ+
Sbjct: 22 YPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSALAWQQ 65
Score = 39 (18.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 292 KNCLLESPTG 301
KN LESPTG
Sbjct: 191 KNTKLESPTG 200
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 280 LHLQVIQGCNKAKNC--LLESPTG 301
+H +V+ N+ +NC LL+ G
Sbjct: 289 VHPEVVGNFNRKENCMELLDGRNG 312
>UNIPROTKB|F1NN99 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AADN02006472
EMBL:AADN02006473 IPI:IPI00575083 IntAct:F1NN99
Ensembl:ENSGALT00000021158 Uniprot:F1NN99
Length = 908
Score = 115 (45.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTSSHNTFMENLRNF 685
+A+NQ++GR IRH+ D+ +ILL+D R+ L +W+R ++Q + + LR F
Sbjct: 843 KAVNQSIGRAIRHQKDYASILLLDHRYARPAILNKLPQWIRERIQVKPAFGSAFAELRKF 902
Query: 686 VRRRME 691
R + +
Sbjct: 903 HRGKSD 908
Score = 67 (28.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 42 CLLESPTGS-GKTLALLCSVLAW-QRKEKELVQQK 74
C+ E P G GK+L+L+C L+W Q EK+ Q++
Sbjct: 43 CVEEDPHGPRGKSLSLICGALSWLQDFEKKKQQEE 77
Score = 67 (28.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 294 CLLESPTGS-GKTLALLCSVLAW-QRKEKELVQQK 326
C+ E P G GK+L+L+C L+W Q EK+ Q++
Sbjct: 43 CVEEDPHGPRGKSLSLICGALSWLQDFEKKKQQEE 77
>UNIPROTKB|Q92771 [details] [associations]
symbol:DDX12P "Putative ATP-dependent RNA helicase DDX12"
species:9606 "Homo sapiens" [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003723 GO:GO:0007049
GO:GO:0004003 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 EMBL:AC092821 EMBL:AC141557
EMBL:U33834 IPI:IPI00023299 UniGene:Hs.447869 UniGene:Hs.504688
ProteinModelPortal:Q92771 SMR:Q92771 STRING:Q92771
PhosphoSite:Q92771 DMDM:182705254 PRIDE:Q92771
GeneCards:GC12M009720 HGNC:HGNC:2737 MIM:601151 neXtProt:NX_Q92771
InParanoid:Q92771 ArrayExpress:Q92771 CleanEx:HS_DDX12
Genevestigator:Q92771 Uniprot:Q92771
Length = 950
Score = 98 (39.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 626 RALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQ 670
+A+NQ++GR IRH+ D+ +I+L+DQR+ L W+R +V+
Sbjct: 858 KAVNQSIGRAIRHQKDFASIVLLDQRYARPPVLAKLPAWIRARVE 902
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 295 LLESPTGSGKTLALLCSVLAWQR---KEKELVQQKMFEQRTQDL 335
+ ESPTG+GK+L+L+C L+W R ++K + ++ E T L
Sbjct: 60 IFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPL 103
Score = 83 (34.3 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 43 LLESPTGSGKTLALLCSVLAWQR---KEKELVQQKMFEQRTQDL 83
+ ESPTG+GK+L+L+C L+W R ++K + ++ E T L
Sbjct: 60 IFESPTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPL 103
Score = 41 (19.5 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 317 RKEKELVQQKMFEQRTQDLQKIPFRKLKISRLKAKDFSTNN 357
R + E ++K E+R Q LQ K RL+ ++ N
Sbjct: 148 RLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEEREN 188
>UNIPROTKB|Q91941 [details] [associations]
symbol:ERCC2/XPD "ERCC2/XPD protein" species:8083
"Xiphophorus maculatus" [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0006917 GO:GO:0003677 GO:GO:0004003
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0043139 HOVERGEN:HBG051498
EMBL:U17896 PIR:I51720 ProteinModelPortal:Q91941 Uniprot:Q91941
Length = 760
Score = 99 (39.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/90 (25%), Positives = 52/90 (57%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQG-LSKWVRNQVQNT 672
++ D+ A R Q LGR IR + D+G ++ D+R Y+++ ++G L +W++ + +
Sbjct: 646 IRENDFLTFDAMRHAAQCLGRAIRGKTDYGLMIFADKR-YARSDKRGKLPRWIQEHINDG 704
Query: 673 SSHNTFMENL---RNFVRRRMEIQLEEERV 699
S + T E + ++F+R+ + +E+++
Sbjct: 705 SLNLTVDEAVQLSKHFLRQMAQPFRQEDQL 734
Score = 79 (32.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 295 LLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT-QDLQKIPFRKLKISRLKAKDF 353
+LE P+G+GKT++LL ++A+QR V + ++ RT +++K+ K+ AK+
Sbjct: 39 VLEMPSGTGKTISLLSLIVAYQRAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKET 98
Query: 354 S-TNN 357
NN
Sbjct: 99 GEVNN 103
>CGD|CAL0002854 [details] [associations]
symbol:RAD3 species:5476 "Candida albicans" [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
CGD:CAL0002854 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 EMBL:AACQ01000024 GO:GO:0003678
GO:GO:0006289 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K10844
RefSeq:XP_720409.1 RefSeq:XP_888639.1 ProteinModelPortal:Q5AFE9
STRING:Q5AFE9 GeneID:3638014 GeneID:3704106 KEGG:cal:CaO19.7119
KEGG:cal:CaO19_7119 Uniprot:Q5AFE9
Length = 765
Score = 99 (39.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
+K D+ A R Q LGR +R + D+G ++L D+RF K +Q L KW+ Q N S
Sbjct: 647 IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFARKKNQ--LPKWIA-QALNDS 703
Query: 674 SHN 676
N
Sbjct: 704 DTN 706
Score = 79 (32.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ-DLQKIPFRKLKISRLKAK 351
NC+LE P+G+GKT++LL +A+Q E ++ ++ RT +++K K+ +A
Sbjct: 37 NCILEMPSGTGKTVSLLSLTVAYQMHYPEH-RKIVYCSRTMSEIEKALIELHKLMEFRAN 95
Query: 352 D 352
+
Sbjct: 96 E 96
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQ 64
NC+LE P+G+GKT++LL +A+Q
Sbjct: 37 NCILEMPSGTGKTVSLLSLTVAYQ 60
>UNIPROTKB|Q5AFE9 [details] [associations]
symbol:RAD3 "Putative uncharacterized protein RAD3"
species:237561 "Candida albicans SC5314" [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 CGD:CAL0002854 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
EMBL:AACQ01000024 GO:GO:0003678 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K10844 RefSeq:XP_720409.1 RefSeq:XP_888639.1
ProteinModelPortal:Q5AFE9 STRING:Q5AFE9 GeneID:3638014
GeneID:3704106 KEGG:cal:CaO19.7119 KEGG:cal:CaO19_7119
Uniprot:Q5AFE9
Length = 765
Score = 99 (39.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
+K D+ A R Q LGR +R + D+G ++L D+RF K +Q L KW+ Q N S
Sbjct: 647 IKENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFARKKNQ--LPKWIA-QALNDS 703
Query: 674 SHN 676
N
Sbjct: 704 DTN 706
Score = 79 (32.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ-DLQKIPFRKLKISRLKAK 351
NC+LE P+G+GKT++LL +A+Q E ++ ++ RT +++K K+ +A
Sbjct: 37 NCILEMPSGTGKTVSLLSLTVAYQMHYPEH-RKIVYCSRTMSEIEKALIELHKLMEFRAN 95
Query: 352 D 352
+
Sbjct: 96 E 96
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQ 64
NC+LE P+G+GKT++LL +A+Q
Sbjct: 37 NCILEMPSGTGKTVSLLSLTVAYQ 60
>FB|FBgn0261850 [details] [associations]
symbol:Xpd "Xeroderma pigmentosum D" species:7227 "Drosophila
melanogaster" [GO:0006289 "nucleotide-excision repair"
evidence=ISS;IDA] [GO:0001113 "transcriptional open complex
formation at RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISS;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=ISS] [GO:0009411 "response to UV" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0000439 "core TFIIH complex"
evidence=ISS;IDA] [GO:0001111 "promoter clearance from RNA
polymerase II promoter" evidence=ISS] [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0007088
"regulation of mitosis" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0051983 "regulation of chromosome
segregation" evidence=IMP] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 EMBL:AE013599
GO:GO:0005524 GO:GO:0005737 GO:GO:0007088 GO:GO:0009411
GO:GO:0003677 GO:GO:0006367 GO:GO:0006289 GO:GO:0051983
GO:GO:0005675 GO:GO:0005703 GO:GO:0010972 GO:GO:0005705
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC GO:GO:0043141
GeneTree:ENSGT00550000075092 GO:GO:0000439 FlyBase:FBgn0261850
RefSeq:NP_726036.2 UniGene:Dm.718 ProteinModelPortal:Q7KVP9
STRING:Q7KVP9 PRIDE:Q7KVP9 EnsemblMetazoa:FBtr0071576 GeneID:37414
KEGG:dme:Dmel_CG9433 UCSC:CG9433-RA CTD:37414 InParanoid:Q7KVP9
OrthoDB:EOG4FTTFK PhylomeDB:Q7KVP9 GenomeRNAi:37414 NextBio:803510
ArrayExpress:Q7KVP9 Bgee:Q7KVP9 Uniprot:Q7KVP9
Length = 769
Score = 88 (36.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
++ D+ A R Q +GR +R + D+G ++ D+RF + + L KW++ + + S
Sbjct: 646 IRENDFLTFDAMRHAAQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVD-S 704
Query: 674 SHNTFMENLRNFVRR 688
N E RR
Sbjct: 705 FCNLSTEEAVQLARR 719
Score = 87 (35.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 282 LQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT-QDLQKI 338
L++ + + +CLLE P+G+GKT LL ++A+ + E V++ ++ RT +++K+
Sbjct: 26 LELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKLIYCSRTVPEIEKV 83
Score = 84 (34.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 30 LQVIQGCNKAKNCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT-QDLQK 85
L++ + + +CLLE P+G+GKT LL ++A+ + E V++ ++ RT +++K
Sbjct: 26 LELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMVEHPETVRKLIYCSRTVPEIEK 82
>TAIR|locus:2014525 [details] [associations]
symbol:UVH6 "ULTRAVIOLET HYPERSENSITIVE 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0009408
"response to heat" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=RCA] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010212 "response to ionizing radiation" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0005634 GO:GO:0009411 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
GO:GO:0051539 GO:GO:0009408 GO:GO:0004003 GO:GO:0006289
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:AY090788 EMBL:AF188623
EMBL:AC005278 EMBL:AY062471 EMBL:AY090915 EMBL:BT010344
IPI:IPI00543586 PIR:C86163 RefSeq:NP_171818.1 RefSeq:NP_849584.1
UniGene:At.10863 ProteinModelPortal:Q8W4M7 SMR:Q8W4M7 IntAct:Q8W4M7
STRING:Q8W4M7 PaxDb:Q8W4M7 PRIDE:Q8W4M7 EnsemblPlants:AT1G03190.1
EnsemblPlants:AT1G03190.2 GeneID:839557 KEGG:ath:AT1G03190
GeneFarm:4445 TAIR:At1g03190 HOGENOM:HOG000205390 InParanoid:Q8W4M7
KO:K10844 OMA:KDVDGKC PhylomeDB:Q8W4M7 ProtClustDB:CLSN2679645
Genevestigator:Q8W4M7 GermOnline:AT1G03190 Uniprot:Q8W4M7
Length = 758
Score = 92 (37.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 608 VYPTGLLKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRN 667
++ T +K GD+ A R Q +GR IR + D+G ++ D+R+ + + L W+ +
Sbjct: 640 LHDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILS 699
Query: 668 QVQNTS---SHNTFMENLRNFVRR 688
+++ S + + R F+R+
Sbjct: 700 HLRDAHLNLSTDMAIHIAREFLRK 723
Score = 80 (33.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT-QDLQKIPFRKLKISR-LKA 350
+CLLE PTG+GKT+ALL + +++ + + ++ RT +++K +LK+ +
Sbjct: 37 HCLLEMPTGTGKTIALLSLITSYRLSRPDSPIKLVYCTRTVHEMEKT-LGELKLLHDYQV 95
Query: 351 KDFSTNN-----GMEQQLLTCITT---INQQEDELRQSTKKTRVDKLKVLNGRSKNLVSS 402
+ T G+ + C+ T + D + + +K ++ L+ + N V
Sbjct: 96 RHLGTQAKILALGLSSRKNLCVNTKVLAAENRDSVDAACRKRTASWVRALSTENPN-VEL 154
Query: 403 IDF 405
DF
Sbjct: 155 CDF 157
>UNIPROTKB|I3LNA6 [details] [associations]
symbol:I3LNA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR014013 PROSITE:PS51193 GO:GO:0005634
GO:GO:0006915 GO:GO:0043066 GO:GO:0043588 GO:GO:0006979
GO:GO:0008283 GO:GO:0007568 GO:GO:0001701 GO:GO:0030198
GO:GO:0040016 GO:GO:0009791 GO:GO:0060218 GO:GO:0035264
GO:GO:0021510 GO:GO:0030282 GO:GO:0006289 GO:GO:0043388
GO:GO:0009650 GO:GO:0035315 GO:GO:0043249 GO:GO:0032289
GO:GO:0048820 GeneTree:ENSGT00550000075092 GO:GO:0016817
Ensembl:ENSSSCT00000028846 OMA:QAYPLEV Uniprot:I3LNA6
Length = 90
Score = 75 (31.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 295 LLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRT-QDLQKI 338
+LE P+G+GKT++LL ++A+QR V + ++ RT +++K+
Sbjct: 39 VLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKV 83
Score = 44 (20.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 239 IGGVKVEFPVK-AYPSQISMMNQVSNLFEQPNH 270
+ G+ V FP YP Q S M ++ + H
Sbjct: 5 VDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGH 37
>SGD|S000000973 [details] [associations]
symbol:RAD3 "5' to 3' DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000439 "core TFIIH complex"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=IDA]
[GO:0070816 "phosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0000990 "core RNA polymerase
binding transcription factor activity" evidence=IC] [GO:0000112
"nucleotide-excision repair factor 3 complex" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0010525 "regulation of transposition,
RNA-mediated" evidence=IMP] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0000019 "regulation of mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
SGD:S000000973 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0046872
GO:GO:0003684 GO:GO:0051539 GO:GO:0006366 EMBL:BK006939 EMBL:U18922
RefSeq:NP_011098.3 GeneID:856918 KEGG:sce:YER171W GO:GO:0070816
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000205390 KO:K10844 OMA:KDVDGKC GO:GO:0033683
GO:GO:0043141 GeneTree:ENSGT00550000075092 GO:GO:0000439
GO:GO:0000112 GO:GO:0010525 GO:GO:0000019 OrthoDB:EOG4G1QQH
EMBL:X02368 EMBL:K03293 PIR:A23308 RefSeq:NP_011102.3
ProteinModelPortal:P06839 DIP:DIP-2425N IntAct:P06839
MINT:MINT-617451 STRING:P06839 PaxDb:P06839 PeptideAtlas:P06839
EnsemblFungi:YER171W GeneID:856922 KEGG:sce:YER175C CYGD:YER171w
NextBio:983374 Genevestigator:P06839 GermOnline:YER171W
Uniprot:P06839
Length = 778
Score = 100 (40.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
++ D+ A R Q LGR +R + D+G ++L D+RF K SQ L KW+ + +
Sbjct: 648 IRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQ--LPKWIAQGLSDAD 705
Query: 674 ---SHNTFMENLRNFVR 687
S + + N + F+R
Sbjct: 706 LNLSTDMAISNTKQFLR 722
Score = 71 (30.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKELVQQKMFEQRTQ-DLQKIPFRKLKISRLKAK 351
N +LE P+G+GKT++LL +A+Q E ++ ++ RT +++K + + K
Sbjct: 37 NSILEMPSGTGKTVSLLSLTIAYQMHYPEH-RKIIYCSRTMSEIEKALVELENLMDYRTK 95
Query: 352 DFSTNNGMEQQLLTCITTINQQEDELRQSTKKTRVDKL--KVLNGRSK 397
+ LT + E+ + K T VD+ ++ NG++K
Sbjct: 96 ELGYQEDFRGLGLTSRKNLCLHP-EVSKERKGTVVDEKCRRMTNGQAK 142
>ASPGD|ASPL0000055138 [details] [associations]
symbol:AN9436 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] InterPro:IPR001945
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
EMBL:BN001308 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 OMA:KDVDGKC EnsemblFungi:CADANIAT00001938
Uniprot:C8VRA9
Length = 791
Score = 98 (39.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 614 LKGGDWYQIQAYRALNQALGRCIRHRYDWGAILLVDQRFYSKNSQQGLSKWVRNQVQNTS 673
++ D+ A R Q LGR +R + D+G ++L D+RF K +Q L KW+ + +
Sbjct: 645 IRENDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRRFQKKRNQ--LPKWISQALLESE 702
Query: 674 SH-NTFME--NLRNFVR 687
++ +T M +NF+R
Sbjct: 703 TNLSTDMAVATAKNFLR 719
Score = 73 (30.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 41 NCLLESPTGSGKTLALLCSVLAWQRKEKE 69
+C+LE P+G+GKT+ LL ++A+Q+ E
Sbjct: 37 HCVLEMPSGTGKTVTLLSLIVAYQQHYPE 65
Score = 73 (30.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 293 NCLLESPTGSGKTLALLCSVLAWQRKEKE 321
+C+LE P+G+GKT+ LL ++A+Q+ E
Sbjct: 37 HCVLEMPSGTGKTVTLLSLIVAYQQHYPE 65
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 795 743 0.00088 121 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 154
No. of states in DFA: 624 (66 KB)
Total size of DFA: 391 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 63.30u 0.14s 63.44t Elapsed: 00:00:13
Total cpu time: 63.32u 0.14s 63.46t Elapsed: 00:00:14
Start: Thu Aug 15 11:46:40 2013 End: Thu Aug 15 11:46:54 2013
WARNINGS ISSUED: 1