Query psy3467
Match_columns 455
No_of_seqs 433 out of 3702
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 17:25:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3467.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3467hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532|consensus 100.0 1.1E-30 2.4E-35 250.9 26.4 282 29-314 65-352 (466)
2 COG2271 UhpC Sugar phosphate p 100.0 1.8E-29 3.9E-34 229.1 21.4 266 15-286 42-319 (448)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 1.4E-27 3E-32 235.4 32.1 255 31-289 70-331 (465)
4 COG2814 AraJ Arabinose efflux 100.0 3.3E-28 7.2E-33 224.1 25.1 258 5-286 16-277 (394)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.5E-27 3.2E-32 230.9 28.7 277 9-286 15-310 (412)
6 PRK14995 methyl viologen resis 100.0 5.5E-27 1.2E-31 232.3 27.9 278 6-287 10-327 (495)
7 PRK09556 uhpT sugar phosphate 100.0 1.8E-27 4E-32 234.3 23.0 275 11-287 38-326 (467)
8 TIGR00903 2A0129 major facilit 100.0 5.7E-27 1.2E-31 222.3 25.3 249 13-286 2-254 (368)
9 PRK03545 putative arabinose tr 100.0 4.5E-26 9.8E-31 219.5 26.7 241 21-286 28-272 (390)
10 TIGR00893 2A0114 d-galactonate 100.0 5.4E-26 1.2E-30 219.4 27.3 263 21-286 13-282 (399)
11 PRK11663 regulatory protein Uh 100.0 3.9E-26 8.5E-31 222.7 26.3 271 12-285 33-309 (434)
12 TIGR00711 efflux_EmrB drug res 99.9 7.8E-26 1.7E-30 224.6 24.5 276 8-287 8-323 (485)
13 TIGR00710 efflux_Bcr_CflA drug 99.9 2.8E-25 6E-30 213.9 26.2 257 11-287 14-274 (385)
14 PRK10091 MFS transport protein 99.9 2E-25 4.3E-30 214.3 25.0 255 8-287 9-267 (382)
15 KOG2533|consensus 99.9 1.9E-25 4E-30 215.3 24.4 261 23-283 67-337 (495)
16 TIGR00886 2A0108 nitrite extru 99.9 2.9E-25 6.2E-30 212.3 25.1 274 7-287 6-293 (366)
17 COG2223 NarK Nitrate/nitrite t 99.9 2E-25 4.3E-30 203.3 22.1 260 5-287 17-286 (417)
18 PRK09705 cynX putative cyanate 99.9 4.8E-25 1E-29 212.3 25.2 243 19-287 26-272 (393)
19 PF07690 MFS_1: Major Facilita 99.9 1.4E-25 3.1E-30 213.1 20.5 265 9-286 3-274 (352)
20 PRK15403 multidrug efflux syst 99.9 8.1E-25 1.8E-29 211.7 25.3 254 10-282 24-281 (413)
21 PRK10213 nepI ribonucleoside t 99.9 1.7E-24 3.7E-29 208.2 27.0 238 21-283 39-280 (394)
22 PRK10642 proline/glycine betai 99.9 1.1E-24 2.3E-29 215.8 26.2 237 43-287 63-318 (490)
23 TIGR00881 2A0104 phosphoglycer 99.9 3.5E-25 7.5E-30 212.5 21.7 265 19-286 12-283 (379)
24 TIGR00890 2A0111 Oxalate/Forma 99.9 1E-24 2.2E-29 209.2 24.2 250 18-287 19-272 (377)
25 PRK11551 putative 3-hydroxyphe 99.9 9.2E-25 2E-29 211.8 24.1 260 8-287 21-287 (406)
26 PRK15402 multidrug efflux syst 99.9 2.3E-24 5.1E-29 208.8 26.8 258 11-287 22-283 (406)
27 PRK11102 bicyclomycin/multidru 99.9 1.4E-24 3.1E-29 208.3 25.0 252 18-287 7-262 (377)
28 PRK10473 multidrug efflux syst 99.9 3.8E-24 8.3E-29 206.4 27.4 261 6-287 7-271 (392)
29 PRK10406 alpha-ketoglutarate t 99.9 2.5E-24 5.3E-29 210.1 26.3 255 13-287 33-311 (432)
30 PRK11273 glpT sn-glycerol-3-ph 99.9 4.6E-24 1E-28 209.3 27.2 258 21-285 48-319 (452)
31 PLN00028 nitrate transmembrane 99.9 5.3E-24 1.2E-28 209.7 27.2 266 11-287 45-320 (476)
32 TIGR00891 2A0112 putative sial 99.9 3E-24 6.4E-29 208.1 25.1 278 6-287 16-306 (405)
33 PRK12307 putative sialic acid 99.9 1.9E-24 4E-29 211.0 23.3 269 7-287 23-298 (426)
34 PRK03699 putative transporter; 99.9 1.1E-23 2.3E-28 203.2 27.6 257 7-287 12-273 (394)
35 TIGR00900 2A0121 H+ Antiporter 99.9 3.1E-24 6.7E-29 204.9 23.6 263 9-287 6-279 (365)
36 PRK15034 nitrate/nitrite trans 99.9 1.2E-23 2.6E-28 201.0 25.2 257 5-287 37-318 (462)
37 PRK10504 putative transporter; 99.9 1.9E-23 4.2E-28 206.5 27.1 277 7-287 15-329 (471)
38 TIGR00805 oat sodium-independe 99.9 2.3E-24 5E-29 217.3 19.5 275 10-285 41-397 (633)
39 TIGR00899 2A0120 sugar efflux 99.9 8.5E-23 1.8E-27 195.9 28.7 254 11-287 6-267 (375)
40 TIGR00712 glpT glycerol-3-phos 99.9 2.9E-23 6.4E-28 202.9 25.2 258 25-286 50-318 (438)
41 TIGR01299 synapt_SV2 synaptic 99.9 3.3E-23 7.1E-28 209.5 26.1 174 8-182 173-360 (742)
42 PRK10077 xylE D-xylose transpo 99.9 8.1E-24 1.8E-28 209.7 21.4 256 29-287 47-338 (479)
43 KOG1330|consensus 99.9 5.7E-25 1.2E-29 201.8 11.0 270 6-285 37-313 (493)
44 PRK10133 L-fucose transporter; 99.9 6.2E-23 1.3E-27 199.7 25.3 261 11-287 35-327 (438)
45 TIGR00887 2A0109 phosphate:H+ 99.9 9.6E-23 2.1E-27 202.6 27.1 254 32-287 51-367 (502)
46 PRK11043 putative transporter; 99.9 1E-22 2.2E-27 197.1 25.4 251 12-287 16-270 (401)
47 TIGR00895 2A0115 benzoate tran 99.9 1.7E-22 3.7E-27 195.2 26.8 271 11-285 26-315 (398)
48 PRK09952 shikimate transporter 99.9 2E-22 4.3E-27 196.7 26.5 230 44-287 71-318 (438)
49 TIGR00897 2A0118 polyol permea 99.9 2.9E-22 6.2E-27 193.7 26.7 246 24-287 35-289 (402)
50 PRK11652 emrD multidrug resist 99.9 4.7E-22 1E-26 192.0 27.9 251 12-284 18-272 (394)
51 PRK03633 putative MFS family t 99.9 3.3E-22 7.2E-27 192.0 25.4 256 4-287 8-267 (381)
52 TIGR00896 CynX cyanate transpo 99.9 1.6E-22 3.4E-27 192.4 22.9 242 19-285 17-262 (355)
53 PRK15075 citrate-proton sympor 99.9 4.2E-22 9.1E-27 194.5 25.6 259 8-287 21-306 (434)
54 TIGR00879 SP MFS transporter, 99.9 1.3E-22 2.8E-27 201.0 21.0 273 10-287 36-351 (481)
55 TIGR00885 fucP L-fucose:H+ sym 99.9 9.7E-22 2.1E-26 189.6 25.9 261 9-287 10-301 (410)
56 TIGR00902 2A0127 phenyl propri 99.9 1.7E-21 3.7E-26 187.0 27.4 256 9-287 11-272 (382)
57 PRK11195 lysophospholipid tran 99.9 9.7E-22 2.1E-26 189.1 25.8 260 10-287 11-273 (393)
58 TIGR00898 2A0119 cation transp 99.9 2.9E-22 6.4E-27 199.8 22.8 254 23-287 110-387 (505)
59 KOG0569|consensus 99.9 9.2E-22 2E-26 187.2 22.3 245 38-287 61-337 (485)
60 TIGR00892 2A0113 monocarboxyla 99.9 1.5E-21 3.3E-26 191.3 23.9 255 21-282 38-303 (455)
61 PRK03893 putative sialic acid 99.9 2.3E-21 5E-26 193.1 23.4 272 8-287 26-343 (496)
62 PRK11128 putative 3-phenylprop 99.9 6.1E-21 1.3E-25 183.2 25.5 249 16-287 18-272 (382)
63 TIGR00901 2A0125 AmpG-related 99.9 6.1E-21 1.3E-25 181.6 24.5 246 21-287 7-277 (356)
64 PRK12382 putative transporter; 99.9 1.8E-20 3.9E-25 180.8 27.1 251 5-287 18-281 (392)
65 TIGR00883 2A0106 metabolite-pr 99.9 1.3E-20 2.9E-25 181.7 26.1 237 34-287 27-287 (394)
66 PRK11646 multidrug resistance 99.9 1.4E-20 3E-25 181.5 25.2 249 8-281 16-269 (400)
67 PRK05122 major facilitator sup 99.9 1.5E-20 3.4E-25 181.7 25.6 249 7-287 20-281 (399)
68 KOG3764|consensus 99.9 2.3E-21 5.1E-26 174.3 16.7 234 29-285 98-336 (464)
69 PRK10489 enterobactin exporter 99.9 2.3E-20 5.1E-25 181.5 25.3 254 12-285 27-289 (417)
70 PRK15011 sugar efflux transpor 99.9 4.7E-20 1E-24 177.7 26.9 254 9-287 22-284 (393)
71 cd06174 MFS The Major Facilita 99.9 3.9E-20 8.5E-25 175.4 25.9 234 8-286 5-242 (352)
72 PRK09874 drug efflux system pr 99.9 7.2E-20 1.6E-24 177.7 27.9 257 8-287 20-290 (408)
73 PRK10054 putative transporter; 99.9 1.7E-20 3.6E-25 180.7 22.3 256 9-287 14-276 (395)
74 PRK11010 ampG muropeptide tran 99.9 7.4E-20 1.6E-24 180.6 26.8 250 17-287 27-291 (491)
75 PRK11902 ampG muropeptide tran 99.9 2.8E-19 6.2E-24 172.9 27.2 254 14-287 11-278 (402)
76 PRK06814 acylglycerophosphoeth 99.8 1.9E-19 4.2E-24 196.3 24.4 244 27-286 41-292 (1140)
77 COG2807 CynX Cyanate permease 99.8 2.5E-18 5.4E-23 153.7 25.4 245 16-285 26-273 (395)
78 PRK08633 2-acyl-glycerophospho 99.8 7.3E-19 1.6E-23 192.5 26.1 242 36-287 46-301 (1146)
79 TIGR00882 2A0105 oligosacchari 99.8 1.3E-18 2.9E-23 168.0 24.5 256 15-287 15-286 (396)
80 COG0738 FucP Fucose permease [ 99.8 5.5E-18 1.2E-22 153.9 25.0 259 11-287 22-304 (422)
81 PRK09528 lacY galactoside perm 99.8 9.8E-19 2.1E-23 170.2 21.5 262 9-287 17-294 (420)
82 KOG0254|consensus 99.8 9.9E-19 2.1E-23 174.0 19.1 262 37-313 89-377 (513)
83 KOG2504|consensus 99.8 2.2E-18 4.8E-23 168.2 20.6 269 11-285 55-363 (509)
84 KOG2532|consensus 99.8 1.2E-20 2.7E-25 181.6 2.0 182 248-455 66-305 (466)
85 TIGR00889 2A0110 nucleoside tr 99.8 1.8E-17 3.8E-22 160.7 23.7 240 22-287 23-283 (418)
86 PRK10207 dipeptide/tripeptide 99.8 4.8E-17 1E-21 160.0 26.9 274 8-287 20-341 (489)
87 TIGR00924 yjdL_sub1_fam amino 99.8 6.9E-17 1.5E-21 158.8 27.2 300 7-313 15-367 (475)
88 PF06609 TRI12: Fungal trichot 99.8 8.1E-17 1.8E-21 157.5 26.6 258 22-285 64-379 (599)
89 TIGR00806 rfc RFC reduced fola 99.8 4.2E-17 9.1E-22 153.4 23.4 260 18-282 42-325 (511)
90 KOG0253|consensus 99.8 6.1E-17 1.3E-21 144.3 22.8 341 22-402 98-502 (528)
91 KOG0255|consensus 99.8 7.7E-17 1.7E-21 161.3 23.5 263 30-313 111-398 (521)
92 TIGR00792 gph sugar (Glycoside 99.8 9.9E-18 2.1E-22 164.2 16.6 244 28-287 26-289 (437)
93 KOG2615|consensus 99.8 3E-17 6.5E-22 147.2 17.8 246 34-283 65-325 (451)
94 TIGR02718 sider_RhtX_FptX side 99.8 2.3E-16 4.9E-21 152.1 23.9 254 11-287 10-276 (390)
95 PF00083 Sugar_tr: Sugar (and 99.8 3.9E-21 8.3E-26 189.1 -9.6 248 36-287 45-318 (451)
96 PTZ00207 hypothetical protein; 99.7 1.9E-15 4.2E-20 148.9 25.3 260 20-286 45-422 (591)
97 PF05977 MFS_3: Transmembrane 99.7 2E-15 4.3E-20 148.3 24.4 240 30-287 38-286 (524)
98 PRK09584 tppB putative tripept 99.7 1.1E-13 2.3E-18 137.1 27.7 159 6-167 25-192 (500)
99 TIGR01272 gluP glucose/galacto 99.6 1.1E-14 2.5E-19 134.9 18.8 188 83-287 6-210 (310)
100 KOG0252|consensus 99.6 1.4E-15 3E-20 139.9 10.7 298 3-312 49-395 (538)
101 KOG3626|consensus 99.6 4E-14 8.7E-19 139.6 16.9 281 5-285 100-459 (735)
102 PF13347 MFS_2: MFS/sugar tran 99.6 3.2E-14 6.9E-19 138.8 16.3 242 29-287 29-292 (428)
103 PF03137 OATP: Organic Anion T 99.6 1.7E-16 3.7E-21 156.3 -0.1 277 9-285 10-372 (539)
104 PRK15462 dipeptide/tripeptide 99.6 2.1E-12 4.6E-17 125.4 28.0 157 8-167 15-180 (493)
105 TIGR01301 GPH_sucrose GPH fami 99.6 8E-13 1.7E-17 127.8 24.1 252 25-284 27-334 (477)
106 PF03825 Nuc_H_symport: Nucleo 99.6 1.5E-12 3.2E-17 124.4 23.8 258 12-287 12-275 (400)
107 TIGR00788 fbt folate/biopterin 99.5 7E-14 1.5E-18 137.2 13.6 255 25-286 49-319 (468)
108 PRK09669 putative symporter Ya 99.5 6.2E-13 1.3E-17 130.4 18.8 241 28-287 36-296 (444)
109 PRK10429 melibiose:sodium symp 99.5 2.2E-13 4.8E-18 134.4 15.7 245 29-287 34-298 (473)
110 KOG2563|consensus 99.5 2.1E-12 4.6E-17 119.3 16.7 246 26-285 69-331 (480)
111 PRK09848 glucuronide transport 99.5 5.7E-12 1.2E-16 123.8 19.6 240 28-287 35-296 (448)
112 PF01306 LacY_symp: LacY proto 99.4 8E-12 1.7E-16 117.3 18.6 242 29-287 35-291 (412)
113 PF11700 ATG22: Vacuole efflux 99.4 7.2E-11 1.6E-15 115.1 25.9 240 37-285 70-347 (477)
114 KOG4686|consensus 99.4 1.7E-13 3.7E-18 118.3 6.3 247 26-287 68-332 (459)
115 PRK11462 putative transporter; 99.4 1.2E-10 2.5E-15 114.4 24.2 238 30-287 38-295 (460)
116 TIGR00880 2_A_01_02 Multidrug 99.4 2.4E-12 5.3E-17 104.5 10.0 133 43-178 4-140 (141)
117 COG2211 MelB Na+/melibiose sym 99.4 6E-11 1.3E-15 112.6 18.5 245 29-287 40-304 (467)
118 TIGR00889 2A0110 nucleoside tr 99.3 3.8E-11 8.3E-16 116.5 16.0 145 36-180 250-406 (418)
119 TIGR00894 2A0114euk Na(+)-depe 99.3 1.6E-12 3.4E-17 128.5 5.2 58 397-454 250-307 (465)
120 KOG2325|consensus 99.3 4.1E-10 9E-15 107.2 21.0 246 6-263 38-306 (488)
121 PF03209 PUCC: PUCC protein; 99.3 4E-10 8.6E-15 104.2 19.2 235 29-281 7-270 (403)
122 PRK10642 proline/glycine betai 99.3 2.6E-10 5.5E-15 113.3 18.3 152 29-183 278-436 (490)
123 TIGR00892 2A0113 monocarboxyla 99.3 2E-11 4.2E-16 120.0 9.9 141 26-169 265-414 (455)
124 COG2270 Permeases of the major 99.3 5.4E-10 1.2E-14 103.1 18.1 242 35-287 56-320 (438)
125 PF05631 DUF791: Protein of un 99.2 2.6E-09 5.6E-14 97.3 22.2 240 23-281 55-304 (354)
126 COG2271 UhpC Sugar phosphate p 99.2 2.3E-11 5E-16 111.8 8.9 71 217-288 27-97 (448)
127 PRK05122 major facilitator sup 99.2 3.9E-10 8.5E-15 109.1 16.8 137 38-177 250-390 (399)
128 PRK09528 lacY galactoside perm 99.2 2.4E-10 5.1E-15 111.4 15.3 146 31-179 256-406 (420)
129 PRK10489 enterobactin exporter 99.2 3.8E-10 8.2E-15 109.9 14.7 155 24-181 245-404 (417)
130 COG3104 PTR2 Dipeptide/tripept 99.2 9.2E-09 2E-13 97.2 22.7 145 29-177 53-206 (498)
131 TIGR00903 2A0129 major facilit 99.2 1.8E-11 3.9E-16 116.4 4.5 53 400-454 184-236 (368)
132 TIGR00890 2A0111 Oxalate/Forma 99.2 5.6E-10 1.2E-14 106.8 14.8 139 26-167 229-373 (377)
133 PRK09874 drug efflux system pr 99.2 9E-10 1.9E-14 106.9 16.1 137 39-178 260-400 (408)
134 cd06174 MFS The Major Facilita 99.2 9.9E-10 2.1E-14 104.0 16.0 150 20-172 193-348 (352)
135 KOG2816|consensus 99.2 1E-09 2.3E-14 105.8 16.0 249 47-313 72-326 (463)
136 PRK11551 putative 3-hydroxyphe 99.2 1.4E-09 3E-14 105.6 16.8 148 25-174 243-394 (406)
137 PRK09556 uhpT sugar phosphate 99.1 9.9E-10 2.2E-14 108.5 15.6 143 28-173 285-446 (467)
138 PRK15011 sugar efflux transpor 99.1 1.8E-09 3.8E-14 104.3 16.8 145 29-178 244-392 (393)
139 PRK03633 putative MFS family t 99.1 2.5E-09 5.4E-14 102.8 17.5 142 25-171 223-367 (381)
140 PRK12382 putative transporter; 99.1 1.6E-09 3.5E-14 104.5 15.9 136 38-176 250-389 (392)
141 TIGR01299 synapt_SV2 synaptic 99.1 8.8E-10 1.9E-14 112.5 13.9 138 39-181 597-738 (742)
142 PRK03545 putative arabinose tr 99.1 7.4E-09 1.6E-13 99.9 18.0 145 29-177 233-381 (390)
143 PRK11663 regulatory protein Uh 99.1 3.6E-09 7.8E-14 103.5 15.9 147 30-179 272-427 (434)
144 TIGR00879 SP MFS transporter, 99.0 2.6E-09 5.6E-14 105.8 14.1 153 25-180 307-474 (481)
145 PRK03893 putative sialic acid 99.0 2.6E-09 5.6E-14 106.6 13.5 138 25-165 298-442 (496)
146 TIGR00902 2A0127 phenyl propri 99.0 7E-09 1.5E-13 99.7 15.9 144 21-169 224-372 (382)
147 TIGR00899 2A0120 sugar efflux 99.0 9.1E-09 2E-13 98.6 16.5 140 29-172 227-370 (375)
148 PRK09705 cynX putative cyanate 99.0 1.2E-08 2.7E-13 98.3 17.1 154 25-182 228-387 (393)
149 TIGR02332 HpaX 4-hydroxyphenyl 99.0 9E-10 2E-14 106.9 8.7 67 220-287 9-75 (412)
150 PRK10077 xylE D-xylose transpo 99.0 8.7E-09 1.9E-13 102.3 15.1 153 26-181 295-462 (479)
151 PRK11273 glpT sn-glycerol-3-ph 99.0 8.7E-09 1.9E-13 101.4 14.7 150 23-175 274-434 (452)
152 PRK11010 ampG muropeptide tran 98.9 1.7E-07 3.7E-12 92.9 22.4 147 29-179 250-405 (491)
153 PRK03699 putative transporter; 98.9 1.7E-08 3.7E-13 97.5 14.8 144 25-172 228-376 (394)
154 TIGR00893 2A0114 d-galactonate 98.9 2.9E-08 6.3E-13 95.5 16.0 141 29-173 243-396 (399)
155 TIGR00897 2A0118 polyol permea 98.9 4.6E-08 9.9E-13 94.7 16.2 145 24-173 244-398 (402)
156 TIGR00883 2A0106 metabolite-pr 98.9 1.8E-08 3.9E-13 97.0 13.4 139 25-166 242-391 (394)
157 TIGR00712 glpT glycerol-3-phos 98.9 4.4E-08 9.5E-13 96.0 14.4 148 30-180 280-437 (438)
158 PF11700 ATG22: Vacuole efflux 98.9 9.9E-08 2.1E-12 93.3 16.5 148 28-178 308-469 (477)
159 TIGR00886 2A0108 nitrite extru 98.8 6.4E-09 1.4E-13 99.3 7.8 68 220-287 2-69 (366)
160 TIGR00891 2A0112 putative sial 98.8 6.2E-08 1.4E-12 93.8 14.2 129 29-160 266-400 (405)
161 KOG4686|consensus 98.8 4.8E-08 1E-12 85.1 11.6 148 28-176 291-442 (459)
162 PF05977 MFS_3: Transmembrane 98.8 1.1E-07 2.3E-12 94.1 15.0 146 24-172 240-390 (524)
163 PRK12307 putative sialic acid 98.8 1.1E-07 2.4E-12 92.9 14.7 132 25-159 254-391 (426)
164 COG2814 AraJ Arabinose efflux 98.8 4.5E-07 9.7E-12 84.8 16.3 147 26-177 236-387 (394)
165 PRK11128 putative 3-phenylprop 98.7 3E-07 6.5E-12 88.4 15.7 135 28-167 231-370 (382)
166 TIGR02718 sider_RhtX_FptX side 98.7 4.3E-07 9.3E-12 87.6 16.7 142 25-169 231-384 (390)
167 TIGR00900 2A0121 H+ Antiporter 98.7 1.8E-07 3.9E-12 89.1 13.5 123 26-148 235-363 (365)
168 COG2270 Permeases of the major 98.7 2.9E-07 6.4E-12 85.3 13.4 148 29-179 280-431 (438)
169 TIGR00792 gph sugar (Glycoside 98.7 4E-07 8.6E-12 89.3 15.4 114 35-148 255-380 (437)
170 TIGR00882 2A0105 oligosacchari 98.7 5.3E-07 1.1E-11 87.2 16.0 140 32-174 249-393 (396)
171 PRK09952 shikimate transporter 98.7 7.1E-07 1.5E-11 87.4 17.0 149 29-179 278-435 (438)
172 TIGR00895 2A0115 benzoate tran 98.7 1.8E-07 3.8E-12 90.3 12.6 121 25-145 273-397 (398)
173 TIGR00881 2A0104 phosphoglycer 98.7 2.1E-07 4.6E-12 89.1 12.9 127 29-158 244-379 (379)
174 PRK10504 putative transporter; 98.7 2.3E-07 5E-12 91.9 13.5 118 31-148 291-415 (471)
175 PLN00028 nitrate transmembrane 98.7 1.8E-07 4E-12 92.5 12.5 140 29-173 280-430 (476)
176 PRK10054 putative transporter; 98.7 3.7E-07 8E-12 88.1 14.2 147 30-180 237-388 (395)
177 PRK15075 citrate-proton sympor 98.7 6E-07 1.3E-11 87.9 15.8 128 25-155 261-398 (434)
178 PRK11646 multidrug resistance 98.7 4.2E-07 9.1E-12 87.9 14.2 144 25-168 231-380 (400)
179 PRK15402 multidrug efflux syst 98.6 1.5E-06 3.2E-11 84.4 16.9 146 29-178 243-397 (406)
180 COG2223 NarK Nitrate/nitrite t 98.6 9E-08 2E-12 88.6 7.8 207 220-451 15-261 (417)
181 PRK10213 nepI ribonucleoside t 98.6 1.9E-06 4E-11 83.2 17.4 141 26-170 241-385 (394)
182 KOG2504|consensus 98.6 2.8E-07 6E-12 90.8 11.6 148 24-173 320-473 (509)
183 TIGR00926 2A1704 Peptide:H+ sy 98.6 3.3E-05 7.1E-10 78.4 26.3 144 31-174 17-180 (654)
184 PRK08633 2-acyl-glycerophospho 98.6 8.1E-07 1.8E-11 98.0 15.0 137 29-167 260-401 (1146)
185 PF03092 BT1: BT1 family; Int 98.6 2.1E-07 4.6E-12 90.4 8.6 149 26-178 14-177 (433)
186 PRK10406 alpha-ketoglutarate t 98.5 3.5E-06 7.5E-11 82.5 16.8 146 29-178 271-425 (432)
187 TIGR00896 CynX cyanate transpo 98.5 1.8E-06 4E-11 82.1 14.3 125 24-148 219-348 (355)
188 TIGR00887 2A0109 phosphate:H+ 98.5 1.8E-06 3.8E-11 86.3 14.7 137 44-181 342-493 (502)
189 PRK06814 acylglycerophosphoeth 98.5 1E-06 2.2E-11 97.1 13.8 137 29-167 253-413 (1140)
190 PF01770 Folate_carrier: Reduc 98.5 0.00011 2.4E-09 69.3 25.2 250 32-284 35-314 (412)
191 PF06813 Nodulin-like: Nodulin 98.5 1.8E-06 4E-11 76.2 12.7 157 19-181 19-186 (250)
192 TIGR00769 AAA ADP/ATP carrier 98.5 0.00015 3.2E-09 70.5 26.6 250 28-285 29-333 (472)
193 PF01306 LacY_symp: LacY proto 98.5 4.9E-06 1.1E-10 78.7 16.0 151 30-183 252-407 (412)
194 PRK11902 ampG muropeptide tran 98.5 5.6E-06 1.2E-10 80.2 17.0 138 28-172 236-386 (402)
195 TIGR01272 gluP glucose/galacto 98.5 5.1E-06 1.1E-10 77.1 15.8 129 30-163 171-302 (310)
196 PRK11195 lysophospholipid tran 98.5 6.2E-06 1.3E-10 79.6 16.8 138 29-171 233-375 (393)
197 TIGR00898 2A0119 cation transp 98.5 4.4E-06 9.5E-11 83.6 16.2 134 42-181 360-499 (505)
198 PRK10091 MFS transport protein 98.5 6.2E-06 1.3E-10 79.3 15.8 143 28-174 226-374 (382)
199 TIGR00805 oat sodium-independe 98.4 1.2E-07 2.6E-12 96.5 3.6 51 401-451 323-373 (633)
200 PRK15403 multidrug efflux syst 98.4 3.9E-07 8.4E-12 88.5 6.5 51 400-450 210-260 (413)
201 PF03825 Nuc_H_symport: Nucleo 98.4 1.3E-05 2.7E-10 77.0 16.5 151 26-179 231-398 (400)
202 PF07690 MFS_1: Major Facilita 98.4 1.5E-06 3.3E-11 82.2 10.0 122 18-139 222-352 (352)
203 TIGR00788 fbt folate/biopterin 98.4 5.2E-06 1.1E-10 81.8 13.2 146 30-178 281-447 (468)
204 PRK09848 glucuronide transport 98.4 1.5E-05 3.3E-10 78.4 16.2 120 29-148 256-388 (448)
205 KOG2533|consensus 98.3 5.5E-07 1.2E-11 87.8 5.6 57 397-453 262-318 (495)
206 PRK14995 methyl viologen resis 98.3 6.5E-06 1.4E-10 82.0 13.2 120 29-148 287-413 (495)
207 COG0477 ProP Permeases of the 98.3 1.1E-05 2.3E-10 74.6 13.5 144 23-167 23-176 (338)
208 TIGR00901 2A0125 AmpG-related 98.3 7.7E-06 1.7E-10 77.8 12.1 110 23-132 230-355 (356)
209 TIGR00711 efflux_EmrB drug res 98.3 1E-05 2.2E-10 80.5 12.9 119 30-148 284-410 (485)
210 PRK10133 L-fucose transporter; 98.3 3E-05 6.5E-10 75.9 15.5 134 29-167 287-424 (438)
211 TIGR00710 efflux_Bcr_CflA drug 98.2 5.1E-05 1.1E-09 72.9 15.9 113 29-142 234-356 (385)
212 PRK11043 putative transporter; 98.2 5.1E-05 1.1E-09 73.5 15.9 122 26-148 227-357 (401)
213 TIGR00924 yjdL_sub1_fam amino 98.2 5.9E-05 1.3E-09 74.6 15.5 136 39-177 314-469 (475)
214 PRK10429 melibiose:sodium symp 98.2 9.9E-05 2.1E-09 73.1 17.2 114 35-148 264-393 (473)
215 KOG3764|consensus 98.1 3E-06 6.5E-11 77.8 5.4 158 13-173 281-451 (464)
216 PRK11652 emrD multidrug resist 98.1 9.9E-05 2.2E-09 71.3 16.3 118 30-148 236-360 (394)
217 PRK10473 multidrug efflux syst 98.1 7.5E-05 1.6E-09 72.1 15.4 129 29-165 231-363 (392)
218 PRK09669 putative symporter Ya 98.1 7E-05 1.5E-09 73.6 15.1 111 38-148 265-388 (444)
219 KOG3762|consensus 98.1 8.7E-06 1.9E-10 77.7 7.5 141 29-172 398-543 (618)
220 COG2807 CynX Cyanate permease 98.1 0.00014 3.1E-09 66.4 14.6 155 19-175 225-384 (395)
221 PRK09584 tppB putative tripept 98.1 4.8E-05 1E-09 75.7 12.4 139 39-177 318-480 (500)
222 PRK11102 bicyclomycin/multidru 98.1 0.00021 4.5E-09 68.5 16.5 114 29-143 222-344 (377)
223 KOG0569|consensus 98.0 0.00015 3.1E-09 70.4 14.9 151 28-182 296-460 (485)
224 PRK15034 nitrate/nitrite trans 98.0 0.00021 4.6E-09 69.3 15.6 130 43-178 292-456 (462)
225 PF06963 FPN1: Ferroportin1 (F 97.9 0.0028 6.1E-08 61.0 21.1 167 116-287 143-325 (432)
226 PF05978 UNC-93: Ion channel r 97.9 0.00083 1.8E-08 54.8 14.9 115 33-147 33-150 (156)
227 PRK11462 putative transporter; 97.9 0.00055 1.2E-08 67.5 16.4 112 37-148 263-387 (460)
228 KOG3098|consensus 97.9 0.0016 3.4E-08 62.7 18.4 108 39-146 51-162 (461)
229 COG0738 FucP Fucose permease [ 97.8 0.00029 6.3E-09 65.4 11.9 152 11-167 245-400 (422)
230 TIGR00885 fucP L-fucose:H+ sym 97.8 0.00057 1.2E-08 66.3 14.7 129 33-163 265-399 (410)
231 PF13347 MFS_2: MFS/sugar tran 97.8 0.00049 1.1E-08 67.3 14.2 112 37-148 260-384 (428)
232 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00011 2.4E-09 52.0 6.9 64 223-287 4-67 (77)
233 TIGR01301 GPH_sucrose GPH fami 97.6 0.0021 4.5E-08 63.0 15.3 141 40-181 308-476 (477)
234 PF03209 PUCC: PUCC protein; 97.6 0.0043 9.3E-08 58.2 16.6 143 29-171 236-393 (403)
235 PRK15462 dipeptide/tripeptide 97.6 0.00034 7.4E-09 68.7 9.1 69 219-287 9-78 (493)
236 KOG0637|consensus 97.6 0.0013 2.7E-08 62.2 12.2 251 26-286 56-363 (498)
237 COG2211 MelB Na+/melibiose sym 97.5 0.0037 8.1E-08 60.3 15.5 117 32-148 267-396 (467)
238 KOG4332|consensus 97.5 0.0014 2.9E-08 57.4 10.7 93 23-115 58-154 (454)
239 PTZ00207 hypothetical protein; 97.5 0.00066 1.4E-08 68.0 10.0 174 4-178 355-554 (591)
240 PRK10207 dipeptide/tripeptide 97.5 0.002 4.4E-08 63.9 13.4 138 39-176 311-476 (489)
241 KOG0253|consensus 97.4 0.00037 8.1E-09 63.8 6.9 125 46-179 390-522 (528)
242 PF06779 DUF1228: Protein of u 97.4 0.00069 1.5E-08 48.5 6.2 47 19-65 9-55 (85)
243 PF12832 MFS_1_like: MFS_1 lik 97.3 0.002 4.2E-08 45.7 7.6 55 11-65 9-63 (77)
244 KOG3342|consensus 97.2 0.0014 3.1E-08 51.0 6.9 88 306-393 25-162 (180)
245 PF03219 TLC: TLC ATP/ADP tran 97.2 0.13 2.9E-06 50.6 22.3 174 106-286 164-350 (491)
246 PF06609 TRI12: Fungal trichot 97.2 0.014 3E-07 58.5 15.4 107 38-144 350-463 (599)
247 PF02487 CLN3: CLN3 protein; 97.2 0.11 2.3E-06 49.5 20.4 132 42-180 64-199 (402)
248 TIGR00806 rfc RFC reduced fola 97.2 0.0033 7.2E-08 60.6 10.4 51 238-288 44-95 (511)
249 KOG2615|consensus 96.9 0.0088 1.9E-07 55.4 10.1 119 29-147 289-413 (451)
250 KOG0252|consensus 96.7 0.0012 2.5E-08 62.4 3.0 128 51-182 362-503 (538)
251 KOG2563|consensus 96.7 0.012 2.6E-07 55.7 9.4 162 17-178 281-451 (480)
252 PRK03612 spermidine synthase; 96.6 0.086 1.9E-06 52.6 15.9 135 32-170 45-191 (521)
253 KOG3574|consensus 96.5 0.19 4.2E-06 46.8 15.7 243 21-284 49-325 (510)
254 PF00854 PTR2: POT family; In 96.5 0.012 2.6E-07 56.3 8.5 82 88-172 35-119 (372)
255 PF06779 DUF1228: Protein of u 96.4 0.018 3.9E-07 41.3 7.0 53 232-285 5-57 (85)
256 KOG0254|consensus 96.2 0.12 2.5E-06 51.9 14.1 147 30-181 323-488 (513)
257 PF00083 Sugar_tr: Sugar (and 96.2 0.0001 2.3E-09 72.5 -7.9 151 26-181 277-441 (451)
258 KOG0255|consensus 96.1 0.22 4.7E-06 50.1 15.3 132 49-184 362-500 (521)
259 COG3202 ATP/ADP translocase [E 96.0 1.6 3.5E-05 42.3 24.1 173 106-284 168-351 (509)
260 KOG3810|consensus 96.0 0.081 1.8E-06 48.5 10.2 195 85-284 93-300 (433)
261 KOG1330|consensus 95.9 0.017 3.7E-07 54.9 6.0 71 219-290 33-103 (493)
262 PF07672 MFS_Mycoplasma: Mycop 95.7 0.043 9.4E-07 48.3 7.3 102 118-231 2-106 (267)
263 KOG2816|consensus 95.6 0.4 8.6E-06 47.0 14.5 119 28-147 268-391 (463)
264 COG3104 PTR2 Dipeptide/tripept 94.9 0.33 7.2E-06 47.0 11.2 137 38-177 325-488 (498)
265 PF02487 CLN3: CLN3 protein; 94.4 0.67 1.5E-05 44.2 11.9 135 11-146 256-395 (402)
266 PF03092 BT1: BT1 family; Int 94.3 0.19 4.2E-06 49.1 8.4 115 34-148 252-380 (433)
267 PF05631 DUF791: Protein of un 94.1 0.24 5.3E-06 46.0 7.9 39 249-287 63-101 (354)
268 PF03137 OATP: Organic Anion T 93.0 0.021 4.6E-07 57.2 -0.9 51 400-450 297-347 (539)
269 KOG1237|consensus 92.6 3 6.6E-05 42.1 13.6 144 25-171 61-240 (571)
270 KOG3626|consensus 92.2 3.9 8.5E-05 42.1 13.8 49 401-449 385-433 (735)
271 KOG3097|consensus 91.9 10 0.00023 35.0 16.6 70 46-115 67-139 (390)
272 KOG3762|consensus 91.7 0.15 3.3E-06 49.6 3.2 57 230-287 22-78 (618)
273 PF06963 FPN1: Ferroportin1 (F 91.3 3.2 6.9E-05 40.3 11.8 115 30-144 286-414 (432)
274 KOG3098|consensus 91.3 4.9 0.00011 39.2 12.9 59 86-145 352-411 (461)
275 PF13000 Acatn: Acetyl-coenzym 89.7 5.4 0.00012 39.0 11.4 175 107-286 139-340 (544)
276 PF06813 Nodulin-like: Nodulin 88.6 1.3 2.8E-05 39.4 6.2 56 230-287 13-68 (250)
277 TIGR00880 2_A_01_02 Multidrug 86.3 0.94 2E-05 35.6 3.8 28 260-287 3-30 (141)
278 KOG1479|consensus 85.8 18 0.00039 34.6 12.3 31 88-119 119-149 (406)
279 TIGR00939 2a57 Equilibrative N 84.6 11 0.00024 36.9 10.8 49 88-141 108-156 (437)
280 PF07857 DUF1632: CEO family ( 84.3 19 0.00042 32.1 11.1 25 225-249 184-208 (254)
281 KOG4332|consensus 83.2 5 0.00011 35.8 6.9 127 39-170 284-425 (454)
282 KOG4830|consensus 79.9 3.6 7.9E-05 36.4 4.9 54 395-448 188-241 (412)
283 TIGR00939 2a57 Equilibrative N 77.9 45 0.00097 32.7 12.4 62 85-146 371-432 (437)
284 PF02990 EMP70: Endomembrane p 74.9 62 0.0013 32.6 12.7 33 252-284 290-322 (521)
285 TIGR00926 2A1704 Peptide:H+ sy 73.9 5.4 0.00012 41.2 5.1 52 235-286 3-55 (654)
286 KOG2325|consensus 73.9 1.9 4.1E-05 42.2 1.7 81 92-175 394-474 (488)
287 KOG3880|consensus 70.0 23 0.0005 32.6 7.4 134 40-179 65-202 (409)
288 KOG0637|consensus 69.1 7.8 0.00017 37.5 4.6 63 220-283 33-95 (498)
289 KOG1479|consensus 67.6 29 0.00063 33.2 8.0 111 35-145 280-402 (406)
290 PF11299 DUF3100: Protein of u 66.7 20 0.00043 31.1 6.1 87 58-145 128-229 (241)
291 KOG3880|consensus 64.2 36 0.00079 31.4 7.4 133 13-145 262-401 (409)
292 PF11368 DUF3169: Protein of u 56.1 1.2E+02 0.0025 27.1 9.5 22 122-143 10-31 (248)
293 COG0477 ProP Permeases of the 54.4 50 0.0011 29.4 7.3 49 237-286 20-70 (338)
294 PF01770 Folate_carrier: Reduc 49.6 2.1E+02 0.0046 27.7 10.5 95 35-129 283-383 (412)
295 PRK13629 threonine/serine tran 47.9 2.8E+02 0.0061 27.2 17.1 29 116-144 18-46 (443)
296 PF13386 DsbD_2: Cytochrome C 47.2 1.8E+02 0.0039 24.8 14.8 36 251-286 146-181 (199)
297 PF03547 Mem_trans: Membrane t 45.4 2.8E+02 0.006 26.4 11.8 22 126-147 99-120 (385)
298 PF01733 Nucleoside_tran: Nucl 44.2 7.5 0.00016 36.0 0.0 25 94-119 5-29 (309)
299 PF01733 Nucleoside_tran: Nucl 39.2 12 0.00026 34.7 0.5 105 41-145 186-307 (309)
300 PF02694 UPF0060: Uncharacteri 32.1 76 0.0016 23.8 3.6 33 254-286 53-85 (107)
301 PRK02237 hypothetical protein; 29.5 1.2E+02 0.0025 23.0 4.2 32 255-286 56-87 (109)
302 PF03596 Cad: Cadmium resistan 27.8 2.1E+02 0.0045 24.3 6.0 10 238-247 113-122 (191)
303 KOG3574|consensus 25.9 67 0.0015 30.7 3.0 67 88-157 371-437 (510)
304 PF12273 RCR: Chitin synthesis 25.8 45 0.00098 26.2 1.7 18 155-172 1-18 (130)
305 PF06645 SPC12: Microsomal sig 25.6 1.2E+02 0.0027 21.2 3.7 35 124-164 10-44 (76)
306 PF03219 TLC: TLC ATP/ADP tran 25.4 7E+02 0.015 25.0 15.9 34 251-284 172-205 (491)
307 PF04226 Transgly_assoc: Trans 24.6 1.9E+02 0.0041 18.1 4.7 37 133-172 6-42 (48)
308 KOG1237|consensus 24.0 2.4E+02 0.0051 28.9 6.7 61 88-148 460-520 (571)
309 PF04341 DUF485: Protein of un 24.0 2.9E+02 0.0063 20.1 6.7 31 220-250 17-47 (91)
310 PF11299 DUF3100: Protein of u 23.8 2.3E+02 0.005 24.9 5.5 57 91-148 110-169 (241)
311 COG5336 Uncharacterized protei 23.6 3.2E+02 0.0069 20.7 5.5 26 40-65 45-70 (116)
312 PF02554 CstA: Carbon starvati 23.0 6.7E+02 0.015 23.9 12.4 35 113-155 48-83 (376)
313 PF05255 UPF0220: Uncharacteri 22.4 4.5E+02 0.0098 21.8 8.3 59 114-172 14-75 (166)
314 PRK11715 inner membrane protei 22.2 7.6E+02 0.016 24.3 9.6 71 93-175 334-404 (436)
315 PF07760 DUF1616: Protein of u 22.1 6.1E+02 0.013 23.2 11.1 58 89-147 22-79 (287)
316 KOG1278|consensus 21.3 1.9E+02 0.004 29.0 5.0 33 252-284 356-388 (628)
317 PRK15015 carbon starvation pro 20.6 9.8E+02 0.021 25.0 12.2 97 46-143 10-109 (701)
318 COG1079 Uncharacterized ABC-ty 20.4 6.4E+02 0.014 23.3 8.0 89 50-144 20-116 (304)
319 TIGR02230 ATPase_gene1 F0F1-AT 20.4 3.8E+02 0.0081 20.1 7.7 12 240-251 60-71 (100)
320 PF11151 DUF2929: Protein of u 20.1 2.7E+02 0.0058 18.3 5.0 39 131-172 11-49 (57)
No 1
>KOG2532|consensus
Probab=99.98 E-value=1.1e-30 Score=250.93 Aligned_cols=282 Identities=44% Similarity=0.825 Sum_probs=252.7
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccC
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGP 102 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 102 (455)
++++++|+++.+++.+.+..|+.+++++.|+++||+| ...+..++.++....++..+.+.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 4579999999999999999999999999999999999 3444555555555555544444779999999999999
Q ss_pred chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCC
Q psy3467 103 IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEA 182 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~ 182 (455)
.+|+...+.++|.|++||++..++...+..+|.+++..++|.+.+. ..||+++|++.++++++..++++.+..|+|++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999998875 27999999999999999999999999999999
Q ss_pred CCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhch
Q psy3467 183 HPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSA 262 (455)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~ 262 (455)
++..+++|++++++...+++.+++ ++.|++++++++.+|.+.+..+..++..+.+..+.|.|+++++|+|..++|++.+
T Consensus 223 h~~is~~El~~I~~~k~~~~~~~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 223 HPNISEKELKYIEKGKSEAHVKKK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred CCCCCHHHHHHHHhcccccccCCC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 999999999998877655444322 7889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHHHH
Q psy3467 263 LPYLAMWIFSMFASFIADSMITSEKFSHTSTRKIINAFLYQVLSFGMIVSSA 314 (455)
Q Consensus 263 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (455)
.+.+...+..+.+|.++||+.+| .+.....|+....++..+.++++++++.
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 99999999999999999999998 7788888999999999888888777654
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-29 Score=229.09 Aligned_cols=266 Identities=13% Similarity=0.212 Sum_probs=219.9
Q ss_pred HHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHhhhhH-
Q psy3467 15 RVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAGHSIL- 87 (455)
Q Consensus 15 ~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~~~~~- 87 (455)
..+.-.+....|.+.+|.++|.+|.|++.+.+.+++.++.++.|.++||.+ ..++.+++..+. .+++++.
T Consensus 42 Yl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil---~Gfs~s~~ 118 (448)
T COG2271 42 YLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNIL---FGFSPSLF 118 (448)
T ss_pred HHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHH---HhhhhHHH
Confidence 344455667778899999999999999999999999999999999999999 444444444444 4445566
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHH--HHhHhcccCCCCchhHHHhhHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLS--GLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~--~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
.+.+.-+++|..+|.-+|.+...+..|++++|||+..++.+++.++|..+.|++. +.+..+ .+||..|++.++++
T Consensus 119 ~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~---~~w~~~f~~pgiia 195 (448)
T COG2271 119 LFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH---GGWRAAFYFPGIIA 195 (448)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc---cchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 888887 79999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCC---CCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 166 AVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVAS---SPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 166 ~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
++..++.++..+|+|+...-.+-+|-.....+..+++++.+ ..+.-++.+++||.+|.++++..+.+..++++..|.
T Consensus 196 iival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~ 275 (448)
T COG2271 196 IIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWG 275 (448)
T ss_pred HHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhH
Confidence 99999999999999987654443332211111100000000 011223456899999999999999999999999999
Q ss_pred hHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 243 PTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
|.|+.|+.|+|..+++...+.+-++.++|.+++|+++||+.+.|
T Consensus 276 p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr 319 (448)
T COG2271 276 PLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR 319 (448)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999987443
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=1.4e-27 Score=235.42 Aligned_cols=255 Identities=43% Similarity=0.734 Sum_probs=208.7
Q ss_pred ccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH--hhhhH-HHHHHHHHHhhcccCch
Q psy3467 31 SFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA--GHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 31 ~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~--~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
|++++.++.|++.+.+.+++.+++++.|+++||+| .......+..+...... ...++ .+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 78999999999999999999999999999999999 22222222223332222 22345 88999999999999999
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCC-CCchhHHHhhHHHHHHHHHhhhhcccCCCCC
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAG-GWPSIFYVFGLVGAVWSVAFLLYCYEEPEAH 183 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~-~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~ 183 (455)
+....++.|++|+++|++++++...+..+|..+++.+++.+.+. . +||+.|++.++++++..++.+.+.+|+|+.+
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~---~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~ 226 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES---WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH 226 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC
Confidence 99999999999999999999999999999999999999998876 5 9999999999988887777777788888766
Q ss_pred CCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchh
Q psy3467 184 PNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSAL 263 (455)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 263 (455)
++.+++|++..++..+++ +++++.+.+++++++++.++...+..++.++..+.+..++|.|+++.+|.+..+.++..+.
T Consensus 227 ~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 227 PCISKFEKKYINSSLQGQ-KGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSL 305 (465)
T ss_pred CCCCHHHHHHHHhhcccc-cCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHH
Confidence 555555544433322111 1112234568999999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccc
Q psy3467 264 PYLAMWIFSMFASFIADSMITSEKFS 289 (455)
Q Consensus 264 ~~~~~~~~~~~~g~l~dr~g~r~~~~ 289 (455)
+.++..++.+++|+++||+++|+...
T Consensus 306 ~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 306 PYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999998876544
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.3e-28 Score=224.15 Aligned_cols=258 Identities=17% Similarity=0.219 Sum_probs=228.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHH
Q psy3467 5 QHTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVA 81 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~ 81 (455)
.....+.|.-....-.....+|++.+|+|+|..+.|++.|+|.++..+++++...++||+. ..+....++.+....+
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 3444555555555556667789999999999999999999999999999999999999999 7777888889999999
Q ss_pred HhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHH
Q psy3467 82 AGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYV 160 (455)
Q Consensus 82 ~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~ 160 (455)
+.++|+ .++++|++.|+..|..++...++.+|..||++|++++++...+..++.++|..++.++.+. .|||+.|+.
T Consensus 96 alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~---~GWR~~F~~ 172 (394)
T COG2814 96 ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL---FGWRATFLA 172 (394)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH---hhHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred hhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHh
Q psy3467 161 FGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMT 240 (455)
Q Consensus 161 ~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
.+.++++..+..+..+| |++.+..+ +.+..+..+++|+|+++...+..++.+.+.+...+
T Consensus 173 ia~l~ll~~~~~~~~lP--~~~~~~~~------------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ft 232 (394)
T COG2814 173 IAVLALLALLLLWKLLP--PSEISGSL------------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYT 232 (394)
T ss_pred HHHHHHHHHHHHHHhCC--CccCCCCC------------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHH
Confidence 99999998888888888 22211110 11122237889999999999999999999999999
Q ss_pred hhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 241 ELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 241 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
|+.+++++..|+|.+..++++..++++..+|+..+|++.|| +.|+
T Consensus 233 Yi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~ 277 (394)
T COG2814 233 YIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR 277 (394)
T ss_pred hHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh
Confidence 99999999999999999999999999999999999999999 6654
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=1.5e-27 Score=230.93 Aligned_cols=277 Identities=15% Similarity=0.188 Sum_probs=213.2
Q ss_pred HHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhh
Q psy3467 9 YSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHS 85 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~ 85 (455)
+...++......+....|.+++|+|++.++.|++.+++.+++.+++++.|+++||+| .......+..+......+++
T Consensus 15 ~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 94 (412)
T TIGR02332 15 ILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT 94 (412)
T ss_pred HHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc
Confidence 333444444555555666788999999999999999999999999999999999999 44444445555566666777
Q ss_pred hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc---cCCCCchhHHHh
Q psy3467 86 IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG---FAGGWPSIFYVF 161 (455)
Q Consensus 86 ~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~---~~~~wr~~f~~~ 161 (455)
++ .+++.|+++|++.+...+....++.|++|+|+|++++++++.+..+|..+++.+++.+.+.+ ...|||+.|++.
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~ 174 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLE 174 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHH
Confidence 88 99999999999999999999999999999999999999999999999999999999886421 115999999999
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhccccc-----CCC--CCC----CCChhhhhcChhHHHHHHHHHH
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLA-----GVA--SSP----PVPWKDIVSSLPFWAILIAHMG 230 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~ 230 (455)
++++++..++.++++||+|++++..++++++...+..+.++ .++ ++. ...+++++ +|.++...+..++
T Consensus 175 ~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 253 (412)
T TIGR02332 175 GFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFC 253 (412)
T ss_pred HHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHH
Confidence 88888777777788899987654333333332221111000 000 011 11233333 5778888888888
Q ss_pred HHHHHHHHHhhhhHHHHHH-hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 231 QNYGYETLMTELPTFMKQV-LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.....+.+..+.|.++++. .+.+..+.+.......++..++.+..|+++||+++|+
T Consensus 254 ~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 254 LTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 8888888999999999872 3677888899999999999999999999999998764
No 6
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=5.5e-27 Score=232.26 Aligned_cols=278 Identities=15% Similarity=0.063 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~ 82 (455)
......++.....+.+...+|++.+|+|.+.++.+|+.+.|.++...++++.|+++||+| ..+....+..+.+..+.
T Consensus 10 ~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~ 89 (495)
T PRK14995 10 IIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA 89 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 345566667777777778888999999999999999999999999999999999999999 55556666677777788
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhccc-CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHH
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWI-PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYV 160 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~ 160 (455)
.+++. .++++|+++|+|.+...+.....+.+.+ |+|+|++++++......+|..+||.+++.+.++ .||||.|++
T Consensus 90 ~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~---~gwr~~f~i 166 (495)
T PRK14995 90 FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH---FYWGSVFLI 166 (495)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CChHHHHHH
Confidence 88888 9999999999999988888888887776 678999999999999999999999999999998 899999999
Q ss_pred hhHHHHHHHHHhhhhcccCCCCCCCCCh-hHHHH-----------Hhhhcc-----------------------cccCCC
Q psy3467 161 FGLVGAVWSVAFLLYCYEEPEAHPNIAE-DERKY-----------IMSSVW-----------------------GLAGVA 205 (455)
Q Consensus 161 ~~~~~~~~~i~~~~~~~e~~~~~~~~~~-~~~~~-----------~~~~~~-----------------------~~~~~~ 205 (455)
...+.++..++..+++||+++++++..+ .+... ..+... ..+.+.
T Consensus 167 ~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~ 246 (495)
T PRK14995 167 NVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAA 246 (495)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9888888777777788886543322111 11000 000000 001122
Q ss_pred CCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 206 SSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
+++..+ .+++|+|.+....+..++..........+.|.|+++.+|+|+.++|+......++..++.++.|++.||+++|
T Consensus 247 ~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~ 325 (495)
T PRK14995 247 SRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR 325 (495)
T ss_pred CCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 333344 5788998888887877777777778888999999999999999999999999999999999999999999987
Q ss_pred cc
Q psy3467 286 EK 287 (455)
Q Consensus 286 ~~ 287 (455)
+.
T Consensus 326 ~~ 327 (495)
T PRK14995 326 LV 327 (495)
T ss_pred HH
Confidence 53
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=1.8e-27 Score=234.35 Aligned_cols=275 Identities=14% Similarity=0.167 Sum_probs=208.0
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HH---HHHHHHHHHHH--HHHH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IG---MLINSVFAFLV--PVAA 82 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~---l~~~~~~~~~~--~~~~ 82 (455)
..........++...|.+.+|+|+++++.|++.+.+.+++.+++++.|.++||+| +. ++.+++..... ..+.
T Consensus 38 ~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 38 YLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred HHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 3333444455566678889999999999999999999999999999999999999 22 22222222222 2233
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF 161 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~ 161 (455)
.++++ .+++.|+++|++.+...+...+++.|++|+++|++++++.+.+.++|.++++.+...+.+.....+||..|.+.
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~ 197 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFP 197 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHH
Confidence 35677 99999999999999999999999999999999999999999999999999999987766541112699999998
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCC----h-hhhhcChhHHHHHHHHHHHHHHHH
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVP----W-KDIVSSLPFWAILIAHMGQNYGYE 236 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (455)
+++.++..++.+++.+|+|++++..++++. ..+....+++..++++.+ + ++.+|+|.++...+..++.+....
T Consensus 198 g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 275 (467)
T PRK09556 198 SIIALIIGFIGLRYGSDSPEELGWGKAEEI--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRI 275 (467)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCCCChhhc--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 888887777777777887765433322221 000000000000011111 1 237899999999999888888888
Q ss_pred HHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 237 TLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 237 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
....+.|.|+++++|+|+.+++...+...++..++.++.|+++||+++|+.
T Consensus 276 ~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 276 GIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 888999999998899999999999988999999999999999999998854
No 8
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=5.7e-27 Score=222.30 Aligned_cols=249 Identities=14% Similarity=0.056 Sum_probs=193.9
Q ss_pred HHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHH-HhhhhH-H
Q psy3467 13 VSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVA-AGHSIL-A 88 (455)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~-~~~~~~-~ 88 (455)
.+++.-..+.+.+|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+| ..+............+ ...+++ .
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34555566788899999999999999999999999999999999999999999 2222222222222111 222567 9
Q ss_pred HHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHH
Q psy3467 89 LSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVW 168 (455)
Q Consensus 89 ~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~ 168 (455)
+++.|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|..+++.+++.+.++ .|||+.|++.++++++.
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~---~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA---GGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cchHHHHHHHHHHHHHH
Confidence 99999999999985 566667779999999999999999999999999999999999988 89999999999988887
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
.++.++++||+|+++++..+.+ + ...++++++|+|.++.+.+..++.....+.+..|+|.|+++
T Consensus 158 ~~~~~~~lp~~p~~~~~~~~~~-~---------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~ 221 (368)
T TIGR00903 158 IILVLAALPALPFQAAEGFGFK-D---------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP 221 (368)
T ss_pred HHHHHHHcCCCCCCCCCCcchH-H---------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999876543211100 0 01135789999999999999999999999999999999987
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.|++.. .+.......+ .+.+..+++.||..||+
T Consensus 222 -~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~~r~~ 254 (368)
T TIGR00903 222 -AGLEDI-AGDAVALAIL---AGLIGVAVIPDRVARAG 254 (368)
T ss_pred -CCCChH-HHHHHHHHHH---HHHHHHHHhhHHhhhhh
Confidence 678764 4544444444 34444688999987653
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=4.5e-26 Score=219.53 Aligned_cols=241 Identities=16% Similarity=0.144 Sum_probs=199.5
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
..+.+|.+.+|+|.|+++.+++.+.+.+++.+++++.|.++||+| .......+..+....+..++++ .+++.|+++
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 107 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGI 107 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 445578889999999999999999999999999999999999999 4444555555566667777888 999999999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhc
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYC 176 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~ 176 (455)
|++.+...+...+++.|++|+|+|++++++.+.+.++|..++|.+++.+.+. .|||+.|++.++++++..+..+...
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~ 184 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY---LGWRTTFLAIGGGALITLLLLIKLL 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999988899999999999999999999999999999999999999999888 8999999999988877666666666
Q ss_pred ccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccc
Q psy3467 177 YEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKE 256 (455)
Q Consensus 177 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 256 (455)
||.|++++. +..+.++.+|+|.++......++..........+.+.++++++|.|+.+
T Consensus 185 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 242 (390)
T PRK03545 185 PLLPSEHSG----------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF 242 (390)
T ss_pred CCCCCCCcc----------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 664432110 0112367888888876666656655566666678888888878999999
Q ss_pred chhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 257 NGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.+.......++..+++++.+++.||+++|+
T Consensus 243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 999999999999999999999999998763
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=5.4e-26 Score=219.38 Aligned_cols=263 Identities=22% Similarity=0.428 Sum_probs=213.1
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
+....|.+.+++|.++++.+++.+++.++..+++++.|.++||+| .......+..+........+++ .+++.|+++
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 92 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLL 92 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 334445578899999999999999999999999999999999999 3333344444444455556677 999999999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhc
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYC 176 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~ 176 (455)
|++.+...+....++.|++|+|+|++++++.+....+|..+++.+++.+.+. .+||+.|++.+++.++..++.++..
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH---FSWQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999999999999999999999999999998887 8999999999888887677777777
Q ss_pred ccCCCCCCCCChhHHHHHhhhccc---ccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCc
Q psy3467 177 YEEPEAHPNIAEDERKYIMSSVWG---LAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFN 253 (455)
Q Consensus 177 ~e~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 253 (455)
||+|++++..++++++...++... +++++++...+.++.+|+|+++...+..++..........+.|.++++.+|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (399)
T TIGR00893 170 PDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLS 249 (399)
T ss_pred cCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccc
Confidence 887665444333333222111111 11112233445678899999999999888888888889999999999889999
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
+.+.+.......++..++.++.+++.||+++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 250 ILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999985
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=3.9e-26 Score=222.75 Aligned_cols=271 Identities=13% Similarity=0.121 Sum_probs=205.9
Q ss_pred HHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-
Q psy3467 12 FVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL- 87 (455)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~- 87 (455)
+........+...+|++.+++|+|.++.+++.+.+.+++.+++++.|+++||+| .......+..+.......++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 112 (434)
T PRK11663 33 ALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLW 112 (434)
T ss_pred HHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHH
Confidence 333333445566778888999999999999999999999999999999999999 4444444444555556666777
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+++.|++.|++.|...+...+++.|++|+|+|++++++.+.+.++|..++|.+++.+.+. .|||+.|++.+++.++
T Consensus 113 ~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~---~gw~~~f~~~~i~~~~ 189 (434)
T PRK11663 113 AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH---YGWRYGMMIAGIIAIV 189 (434)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999887 8999999998887776
Q ss_pred HHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCC-h-hhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVP-W-KDIVSSLPFWAILIAHMGQNYGYETLMTELPTF 245 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
..+...+++||+|++.+..+.++.+...++..++.++++.+..+ + ...+|++.++...+..++.+.....+..+.|.|
T Consensus 190 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 269 (434)
T PRK11663 190 VGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLY 269 (434)
T ss_pred HHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667788765432111100000000000000000001111 1 125678888888887777777777888899999
Q ss_pred HHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 246 MKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 246 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
+++++|++..+.+...+.+.++..++.++.|++.||+.+|
T Consensus 270 l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 270 MSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 9877899999999999999999999999999999999543
No 12
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=7.8e-26 Score=224.56 Aligned_cols=276 Identities=18% Similarity=0.197 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
....++...........+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+| ..+....+..+....+..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 87 (485)
T TIGR00711 8 MLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc
Confidence 4445555566666777788899999999999999999999999999999999999999 4555555666666677777
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|+++|++.+...+...+++.|++|+|+|+++.++......+|..++|.+++.+.++ .+||+.|++.++
T Consensus 88 ~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~w~~~f~~~~~ 164 (485)
T TIGR00711 88 PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN---YHWRWIFLINVP 164 (485)
T ss_pred CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC---cCceehhhhhhH
Confidence 888 9999999999999999999999999999999999999999999999999999999999988 899999999988
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHH------------HHhhhccc------------------------ccCCCCC
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERK------------YIMSSVWG------------------------LAGVASS 207 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~------------~~~~~~~~------------------------~~~~~~~ 207 (455)
++++..++..+..||+++++++..+.... ...+.... .+.++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDN 244 (485)
T ss_pred HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88776777777777754432221111000 00000000 0011122
Q ss_pred CCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 208 PPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+..+ .+++|+|.++...+..++.....+....+.|.|+++.+|+++.+.++......++..++.++.|++.||+++|+.
T Consensus 245 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 323 (485)
T TIGR00711 245 PLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL 323 (485)
T ss_pred CccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH
Confidence 2233 467888888888888888888888888999999999899999999999999999999999999999999998754
No 13
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.94 E-value=2.8e-25 Score=213.87 Aligned_cols=257 Identities=17% Similarity=0.201 Sum_probs=211.0
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
..+.........+.+|.+.+|+|.|+++.+++.+++.++..+++++.|+++||+| ..+....+..+........+++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 93 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNI 93 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 3445556667778889999999999999999999999999999999999999999 3444444445555555566777
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGA 166 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~ 166 (455)
.+++.|++.|++.+...+...+++.|++|+|+|+++.++.+....+|..++|.+++.+.+. .+||+.|++.+++.+
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~ 170 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGI 170 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999887 899999999888877
Q ss_pred HHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 167 VWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 167 ~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
+..+..++..||+++++++.++++ ...++++.+|+|+++...+..............+.|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (385)
T TIGR00710 171 LLSALIFFILPETLPYEARIQIST-----------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVY 233 (385)
T ss_pred HHHHHHHHhCCCCCCCcccCCHHH-----------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHH
Confidence 766666667777654332211110 112346778888888877777777777777788889999
Q ss_pred HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 247 KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
++++|.++.+.+.+.....++..+++++.+++.||+++|+.
T Consensus 234 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 274 (385)
T TIGR00710 234 IDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSL 274 (385)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 88899999999999999999999999999999999998854
No 14
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=2e-25 Score=214.32 Aligned_cols=255 Identities=15% Similarity=0.189 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
.+..+........+.+.+|.+++|+|.+.++.+++.+.+.+++.+++++.|+++||+| .......+..+....+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~ 88 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS 88 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555566666778888899999999999999999999999999999999999999 4444445555556667777
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+. .+||+.|++.++
T Consensus 89 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~gwr~~f~~~~~ 165 (382)
T PRK10091 89 SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE---FSWRYTFLLIAV 165 (382)
T ss_pred CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh---ccHHHHHHHHHH
Confidence 788 9999999999999988888899999999999999999999999999999999999999887 899999999988
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhh
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELP 243 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
+.++..+..++..||.+++++. +.+ .. .+.+|+++.+......++.+........+.+
T Consensus 166 ~~~~~~~~~~~~lp~~~~~~~~---~~~------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK10091 166 FNIAVLASIYFWVPDIRDEAKG---GLR------------------EQ-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIK 223 (382)
T ss_pred HHHHHHHHHHHhCCCCCccccc---CHH------------------HH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777666666667775432110 000 01 3456676666665555554445555566777
Q ss_pred HHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 244 TFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 244 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++++.+|+++.+.++..+...++..+++++.+++.||+++|+.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~ 267 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI 267 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH
Confidence 78887789999999999999999999999999999999998764
No 15
>KOG2533|consensus
Probab=99.94 E-value=1.9e-25 Score=215.27 Aligned_cols=261 Identities=17% Similarity=0.283 Sum_probs=217.7
Q ss_pred hhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHH-HHHhhhhH-HHHHHHHHHhh
Q psy3467 23 RRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVP-VAAGHSIL-ALSIIRFIQGL 98 (455)
Q Consensus 23 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~-~~~~~~~~-~~~~~r~l~G~ 98 (455)
+.+..+.+|.+....+.+.+.++++++++++.++++.+.||++ ..+....+...... +.....++ .+++.|++.|+
T Consensus 67 a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl 146 (495)
T KOG2533|consen 67 ASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGL 146 (495)
T ss_pred HHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4445578899999999999999999999999999999999999 33333333322222 33335667 99999999999
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc---ccCCCCchhHHHhhHHHHHHHHHhhhh
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY---GFAGGWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~---~~~~~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
.++..+|....+++.|+.++||++.++++.+..++|.++|.+++..+.+. ....||||.|++.++++++..++.+++
T Consensus 147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEE
Confidence 99999999999999999999999999999999999999999999986431 112699999999999999999999999
Q ss_pred cccCCCCCCCCChhHHHHHhhhcccccCC---CCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcC
Q psy3467 176 CYEEPEAHPNIAEDERKYIMSSVWGLAGV---ASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHF 252 (455)
Q Consensus 176 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 252 (455)
+|+.|++.+-.+++|+....++.+++..+ ++.+...+++.+++|.+|...+..++.....+++.+++|.++++..|+
T Consensus 227 lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~ 306 (495)
T KOG2533|consen 227 LPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGY 306 (495)
T ss_pred ecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCc
Confidence 99999988777777765443333322211 113455667889999999999999999999999999999999996679
Q ss_pred ccccchhhchhHHHHHHHHHHHHHHHHHHhh
Q psy3467 253 NIKENGTLSALPYLAMWIFSMFASFIADSMI 283 (455)
Q Consensus 253 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 283 (455)
+..+++.+.....++++++.+++|.++||+.
T Consensus 307 s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 307 SELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred ChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999964
No 16
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=2.9e-25 Score=212.28 Aligned_cols=274 Identities=12% Similarity=0.115 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH
Q psy3467 7 TAYSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~ 82 (455)
..+..++.........+..|. +++++|+|+.+.+++.+++.+++.+++++.|+++||+| ..+....+..+......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG 85 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 445555555566667777885 88999999999999999999999999999999999999 44444445555555556
Q ss_pred hhh-hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc-------cCCC
Q psy3467 83 GHS-IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG-------FAGG 153 (455)
Q Consensus 83 ~~~-~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~-------~~~~ 153 (455)
..+ ++ .+++.|+++|++.+ ..+....++.|++|+|+|+++.++.....++|..+++.+++.+.+.. ...+
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 86 LAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 666 77 88999999999865 45678899999999999999999999888888888888877665420 0148
Q ss_pred CchhH-HHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHH
Q psy3467 154 WPSIF-YVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQN 232 (455)
Q Consensus 154 wr~~f-~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (455)
||+.| +..+++..+..++.+.+.+|+|+++++.+ +.+. ++.. ...+++...+.++.+++|+++...+..++..
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPPGKPATG--KLSF-KGAR---WSVGTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCcccccch--hccc-cccc---ccccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 99999 44466655555566666677664322111 0000 0000 0000111124567888888888888777777
Q ss_pred HHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 233 YGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
........+.|.|+++.+|.++.+.+.+.....+...++.++.|++.||+++|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK 293 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh
Confidence 7777888999999999899999999988888899999999999999999999854
No 17
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2e-25 Score=203.32 Aligned_cols=260 Identities=14% Similarity=0.193 Sum_probs=218.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HH---HHHHHHHHHHH
Q psy3467 5 QHTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IG---MLINSVFAFLV 78 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~---l~~~~~~~~~~ 78 (455)
..+.....++.++-..+++..+.+++|+|+|++|.+++.++..+...+..++.|.+.||+| .. ++...+-++..
T Consensus 17 ~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~ 96 (417)
T COG2223 17 WLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGL 96 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHH
Confidence 3445556667777777888888888999999999999999999999999999999999999 33 33333334444
Q ss_pred HHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC---C
Q psy3467 79 PVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG---W 154 (455)
Q Consensus 79 ~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~---w 154 (455)
......+++ ++++.+.+.|++.+ .+......+++++|||++|.++|+.. ..|+|..+...++..+... .+ |
T Consensus 97 ~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~---~g~~~w 171 (417)
T COG2223 97 AFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA---FGFLAW 171 (417)
T ss_pred HHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH---HhhHHH
Confidence 444444455 99999999999854 78899999999999999999999999 8999999999999999887 77 9
Q ss_pred chhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHH
Q psy3467 155 PSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYG 234 (455)
Q Consensus 155 r~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (455)
|..-.+..+..++..+..++...|.|+.+...++.+ ....+.++++++.|.+.+.++..+..
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------------~~~~~~v~~~~~~W~lsllY~~tFG~ 233 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------------PAQLKAVFSNKDTWLLSLLYFATFGG 233 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc------------------hhHHHHHhcCcchHHHHHHHHHHHHH
Confidence 999999988888888888888888877532211111 03357788999999999999999999
Q ss_pred HHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 235 YETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.++..++|.|++++||.++.++|.....+.....+.++.+|+++||+|.+|+
T Consensus 234 Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 234 FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 99999999999999999999999999999999999999999999999999876
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=4.8e-25 Score=212.26 Aligned_cols=243 Identities=13% Similarity=0.050 Sum_probs=198.4
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHH
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRF 94 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~ 94 (455)
..+.+.+|++++|+|+|+++.+++.+.+.+++.+++++.|+++||+| +......+..+....+++++++ .+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999 6777777777888888888888 9999999
Q ss_pred HHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
++|++.+...+....++.|++| |+|+++++.++.+...|..+++.+++.+.++. .+||+.+.+.++..++.....+.
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~ 182 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALFAWWW 182 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999996 88999999999999999999999999888761 38999887766655443222222
Q ss_pred hcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcc
Q psy3467 175 YCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNI 254 (455)
Q Consensus 175 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 254 (455)
..++.|++++ +++ .+.++.+|+++.+.+.+..++....+.....+.|.++++ +|.+.
T Consensus 183 ~~~~~~~~~~---------------------~~~-~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~ 239 (393)
T PRK09705 183 QSAREVASSH---------------------KTT-TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASA 239 (393)
T ss_pred HhcCCCcccc---------------------CCC-cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCh
Confidence 2222221100 000 111445677788777777777777888888999999987 79999
Q ss_pred ccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 255 KENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.+...+.+.++..++++..+++.||.++|+.
T Consensus 240 ~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~ 272 (393)
T PRK09705 240 QYSGSLLALMTLGQAAGALLMPAMARHQDRRKL 272 (393)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhccchHH
Confidence 999999999999999999999999999998754
No 19
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.94 E-value=1.4e-25 Score=213.09 Aligned_cols=265 Identities=24% Similarity=0.396 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHhhhhhc-ccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 9 YSIFVSRVINTKLTRRVH-HKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~-~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
+..++.......+.+.+| .+.+++|.|+++.+++.+++.++..+++++.|+++||+| .......+..+......++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 344555555666667777 788999999999999999999999999999999999999 3333333333332333333
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
++. .+++.|+++|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.+. .+||+.|++.++
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~~~~~~~~~~~~ 159 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY---FGWRWAFLISAI 159 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---CHHCCHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc---cccccccccccc
Confidence 555 9999999999999999999999999999999999999999999999999999999999877 899999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCC-ChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPV-PWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
+.++..++..++.++++++++..++++++.. .+++.. .+++++++|.++......++..........+.
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESESK----------KPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFL 229 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccccc----------cccccccccccccccchhhhhhhhhhHHHHHHHHhhccc
Confidence 9888766555666665544433222221000 011122 35777777777655555566666777788999
Q ss_pred hHHHHHHhcCc-cccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 243 PTFMKQVLHFN-IKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 243 ~~~~~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
|.|+++.+|++ ..+.+.......+...++.++.+++.||+++|+
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 274 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR 274 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99977779999 789999999999999999999999999998764
No 20
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=8.1e-25 Score=211.74 Aligned_cols=254 Identities=12% Similarity=0.090 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhh
Q psy3467 10 SIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSI 86 (455)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~ 86 (455)
..++.........|.+|++.+++|.+.++.++..+++.+++.+++++.|+++||+| ..+....+..+....+..+++
T Consensus 24 ~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 24 YDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTS 103 (413)
T ss_pred HHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCC
Confidence 34445555677788889999999999999999999999999999999999999999 444455555666666777788
Q ss_pred H-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH
Q psy3467 87 L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 87 ~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
+ .++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++ .|||+.|++.+++.
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~ 180 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF---VHWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHH
Confidence 8 9999999999998877777888999999999999999999999999999999999999887 89999999998888
Q ss_pred HHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy3467 166 AVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTF 245 (455)
Q Consensus 166 ~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
++..+..++.+||+++++++.. +.+ +..+++++++|||.++...+..++............|.+
T Consensus 181 ~i~~~~~~~~lp~~~~~~~~~~-~~~---------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~ 244 (413)
T PRK15403 181 LIAFVGLLLAMPETVKRGAVPF-SAK---------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVI 244 (413)
T ss_pred HHHHHHHHHhCCCCccccCCCC-ChH---------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 8766665667788654221110 000 012245788999999988888888777777788889999
Q ss_pred HHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHh
Q psy3467 246 MKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSM 282 (455)
Q Consensus 246 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 282 (455)
+++.+|+++.+.++.......+..++..+.+.+.+|.
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9998899999999987777777777766666655443
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=1.7e-24 Score=208.24 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=190.2
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
..+.+|++.+|+|.++++.++..+.+.++..+++++.|+++||+| ..+....+..+....+..++++ .+++.|+++
T Consensus 39 ~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 118 (394)
T PRK10213 39 PVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACL 118 (394)
T ss_pred HHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHH
Confidence 345577788999999999999999999999999999999999999 4444444555555556666777 999999999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhc
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYC 176 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~ 176 (455)
|++.+...+...+++.|++|+|+|+++.++...+.++|..++|.+++.+.+. .|||+.|++.++++++..+......
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999999999999988 8999999998877766444444445
Q ss_pred ccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccc
Q psy3467 177 YEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKE 256 (455)
Q Consensus 177 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 256 (455)
||+|++++ +...+.++.+|+|.++...+..++..........+.+.++.+++|+++.+
T Consensus 196 p~~~~~~~----------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~ 253 (394)
T PRK10213 196 PSLPGEPS----------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDG 253 (394)
T ss_pred CCCCcccc----------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH
Confidence 66432111 01112357788888887766666666666666666644444458999999
Q ss_pred chhhchhHHHHHHHHHHHHHHHHHHhh
Q psy3467 257 NGTLSALPYLAMWIFSMFASFIADSMI 283 (455)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~g~l~dr~g 283 (455)
.+......+++..++.++.+++.||.+
T Consensus 254 ~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 254 LTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999988899999999999999999854
No 22
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=1.1e-24 Score=215.78 Aligned_cols=237 Identities=19% Similarity=0.281 Sum_probs=172.4
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-H--------HHHHHHHHhhcccCchhhHHHH
Q psy3467 43 LSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-A--------LSIIRFIQGLGEGPIVPCTHAL 110 (455)
Q Consensus 43 ~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~--------~~~~r~l~G~~~~~~~~~~~~~ 110 (455)
.++..++..+++++.|+++||+| ..+....+..+....+++++++ . +++.|+++|++.|...+...++
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 57888999999999999999999 5555555666666777777776 4 8999999999999999999999
Q ss_pred HhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc-----ccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCC
Q psy3467 111 LAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY-----GFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPN 185 (455)
Q Consensus 111 i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~-----~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~ 185 (455)
++|++|+|+|+++.++.+.+..+|..+++.+...+... ....|||+.|++.+++.++ .+.....+||+|+..+.
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~ 221 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQH 221 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHH
Confidence 99999999999999999998888988888776554320 0117999999997765554 44445677887664211
Q ss_pred CChhHHHHHhhhcccccCCCCCCCCChhhhhcC-hh-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchh
Q psy3467 186 IAEDERKYIMSSVWGLAGVASSPPVPWKDIVSS-LP-FWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSAL 263 (455)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 263 (455)
.++.++ ... +...++++.++++++++ ++ +.......++....++....+.|.++++.+|++..+.++....
T Consensus 222 ~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~ 294 (490)
T PRK10642 222 VDKLEQ-----GDR--EGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIA 294 (490)
T ss_pred HHhhhh-----hcc--ccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 110000 000 00011233456667653 22 2222233344556777788899999988789988888877777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 264 PYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 264 ~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..++..++.+..|+++||+|||+.
T Consensus 295 ~~~~~~~~~~~~g~l~dr~grr~~ 318 (490)
T PRK10642 295 IMIGMLFVQPVMGLLSDRFGRRPF 318 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHH
Confidence 888899999999999999999854
No 23
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.94 E-value=3.5e-25 Score=212.51 Aligned_cols=265 Identities=14% Similarity=0.149 Sum_probs=206.2
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHH
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRF 94 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~ 94 (455)
..+....|.+.+++|.|+++.+++.+++.++..+++++.|+++||+| ..+....+..+........+++ .+++.|+
T Consensus 12 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (379)
T TIGR00881 12 KNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWA 91 (379)
T ss_pred HhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33444556677889999999999999999999999999999999999 4444444455555555666677 9999999
Q ss_pred HHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHH-HHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSL-PLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~-~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
+.|++.+...+...+++.|++|+|+|+++.++.+.+..+|..++| .++..+.+. .+||+.|++.+++.++..++.+
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 92 LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL---YSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 577777776 8999999998888877677777
Q ss_pred hhcccCCCCCCCCChhHHHHHh-hh-cccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhc
Q psy3467 174 LYCYEEPEAHPNIAEDERKYIM-SS-VWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLH 251 (455)
Q Consensus 174 ~~~~e~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 251 (455)
++.||+|++++..++++.+..+ ++ ..+.+++.++.+...++++|+|.++.+.+..++.+........+.|.++++.+|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 248 (379)
T TIGR00881 169 LLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKG 248 (379)
T ss_pred eeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7788876543222111110000 00 000000111122234667889999988888888888888888999999998889
Q ss_pred CccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 252 FNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 252 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
+++.+.+...+...++..++.++.+++.||..+|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 283 (379)
T TIGR00881 249 FSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR 283 (379)
T ss_pred CCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999975543
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.94 E-value=1e-24 Score=209.16 Aligned_cols=250 Identities=15% Similarity=0.131 Sum_probs=197.1
Q ss_pred HHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHH
Q psy3467 18 NTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIR 93 (455)
Q Consensus 18 ~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r 93 (455)
....++..|.+.+|+|+|+++.+++.+++.++..+++++.|+++||+| .......+..+.......++++ .+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334667778889999999999999999999999999999999999999 4444555555666667777888 999999
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
+++|++.+...+.....+.|++| |+|+++.++...+.++|..+++.+.+.+.+. .+||+.|++.+++.++..+..+
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL---EGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888889999986 7899999999999999998877676666666 7999999999988888677766
Q ss_pred hhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCc
Q psy3467 174 LYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFN 253 (455)
Q Consensus 174 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 253 (455)
++.+|+|+++++.+++ .+++..+.++.+|+|.++...+..++..........+.+.+.++ +|.+
T Consensus 175 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (377)
T TIGR00890 175 FLIGYPPGQLIKTNIE---------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLS 238 (377)
T ss_pred HheecCchhccccCcc---------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCC
Confidence 6766644322110000 01112234678888888877776666666555566667777666 7888
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..+.+...+...++..+++++.|++.||++||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 272 (377)
T TIGR00890 239 DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 8888999899999999999999999999998864
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=9.2e-25 Score=211.78 Aligned_cols=260 Identities=16% Similarity=0.193 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
....+++...........|.+.+|+|.++++.+++.+.+.++..+++++.|+++||+| .......+..+........
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 100 (406)
T PRK11551 21 FLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh
Confidence 3455566666666777788889999999999999999999999999999999999999 3333444444444455566
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.++..+.+. .+||+.|++.++
T Consensus 101 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 177 (406)
T PRK11551 101 WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD---AAWRHIFYVGGV 177 (406)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---cCHHHHHHHHHH
Confidence 777 9999999999999999999999999999999999999999999999999999999888777 899999999887
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhc---ChhHHHHHHHHHHHHHHHHHHHh
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVS---SLPFWAILIAHMGQNYGYETLMT 240 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
+.++..+....++||+|+++++.++++. ++...+..++ ++..+.+....+......+....
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (406)
T PRK11551 178 GPLLLVPLLMRWLPESRAFAQAAGAGKQ----------------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLN 241 (406)
T ss_pred HHHHHHHHHHHhCCCChhHHhccCcchh----------------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666778887653221110000 0001111121 12233333444444555666777
Q ss_pred hhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 241 ELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 241 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.|.++++ .|+++.+.+.......++..+++++.|++.||+++|+.
T Consensus 242 ~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (406)
T PRK11551 242 WLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV 287 (406)
T ss_pred HHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 88999988 79999999999999999999999999999999998754
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=2.3e-24 Score=208.83 Aligned_cols=258 Identities=13% Similarity=0.094 Sum_probs=205.1
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
.++....+..+.+.++.+.+|+|.|+.+.++..+.+.+++.+++++.|+++||+| ..+....+..+.......++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK15402 22 EFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSI 101 (406)
T ss_pred HHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 3344445666777888889999999999999999999999999999999999999 3334444444455555566677
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGA 166 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~ 166 (455)
.+++.|+++|++.+...+...+.+.|++|+++|.+..++......+|..++|.+++.+.+. .+||+.|++.+++.+
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~~w~~~~~~~~~~~~ 178 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV---LPWRGMFVLFAALAA 178 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCccHHHHHHHHHHH
Confidence 8899999999999988899999999999999999999999988899999999999999887 899999999888887
Q ss_pred HHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 167 VWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 167 ~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
+..+..++..||+++++++..+ . ++...++++++++|+++...+..++..........+.|.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 242 (406)
T PRK15402 179 LSFFGLWRAMPETAGRVGEKLS-L---------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVIL 242 (406)
T ss_pred HHHHHHHHhCCCCCcccccccc-H---------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7666666667776433211100 0 01122346788999888877777666666666667788888
Q ss_pred HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 247 KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
++.+|+++.+.+.......++..++.++.+++.||+++|+.
T Consensus 243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~ 283 (406)
T PRK15402 243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL 283 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 88889999998888777788889999999999999998754
No 27
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=1.4e-24 Score=208.34 Aligned_cols=252 Identities=16% Similarity=0.219 Sum_probs=205.0
Q ss_pred HHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHH
Q psy3467 18 NTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIR 93 (455)
Q Consensus 18 ~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r 93 (455)
.....|.+|++.+++|+|+++.+++.+++.++..+++++.|+++||+| .......+..+........+++ .+++.|
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 86 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR 86 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 445667888888999999999999999999999999999999999999 4444444444555555566677 899999
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
+++|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+. .+||+.|++.+++.++..++..
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW---FSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887 8999999998888877666666
Q ss_pred hhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCc
Q psy3467 174 LYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFN 253 (455)
Q Consensus 174 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 253 (455)
++.||+++++++.+.+. ++...++++.+++|+++...+..++..........+.|.++.+.+|++
T Consensus 164 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 228 (377)
T PRK11102 164 FFIPETLPKERRQPFHL---------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVS 228 (377)
T ss_pred HhCCccCcccccCCCCh---------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCC
Confidence 77777643322111100 011123467788888877777666666667777778888888878999
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.+.+.......++..++.++.+++.||+++|+.
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 262 (377)
T PRK11102 229 PQNFGYYFALNIVFLFVMTIINSRFVRRVGALNM 262 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 9999999999999999999999999999999864
No 28
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.93 E-value=3.8e-24 Score=206.39 Aligned_cols=261 Identities=15% Similarity=0.138 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~ 82 (455)
......+.+........+.+|.+.+|+|.|+++.++..+.+.++..+++++.|+++||+| ..+.......+......
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 334445555555566667888999999999999999999999999999999999999999 33334444444555555
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF 161 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~ 161 (455)
..++. .+++.|+++|++.+...+....++.|++|+|+|+++.++.+....+|..++|.+++.+.+. .+||+.|++.
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~---~g~~~~~~~~ 163 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK---FPWQSLFYTM 163 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---cChHHHHHHH
Confidence 56666 8889999999999988999999999999999999999999999999999999999988877 8999999999
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhh
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTE 241 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (455)
+.+.++..++.+++.||+++++++.++ +.....++.+|+++++...+...+..........+
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPARAPAAS------------------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVNT 225 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCcc------------------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888887777777777876433211100 00112256677777766555544444444455667
Q ss_pred hhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 242 LPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 242 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.|.+.++++|+++.+.+.......++..++.++.+++.||+++|+.
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~ 271 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL 271 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 7888888889999999998888999999999999999999998854
No 29
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.93 E-value=2.5e-24 Score=210.07 Aligned_cols=255 Identities=13% Similarity=0.090 Sum_probs=179.2
Q ss_pred HHHHHHHHhhhhhcccCcccc---cccchhhHHH---HHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh
Q psy3467 13 VSRVINTKLTRRVHHKDGSFI---WTTAEQGYVL---SSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~---~s~~~~~~~~---s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~ 83 (455)
++......++...|.+.+|++ .++.+.+... +...++..++++++|+++||+| ..........+....+++
T Consensus 33 ~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~ 112 (432)
T PRK10406 33 VEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIAC 112 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhh
Confidence 333333334444445555653 4454444444 4445555599999999999999 344444444444555544
Q ss_pred hhhH---------HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc-----c
Q psy3467 84 HSIL---------ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY-----G 149 (455)
Q Consensus 84 ~~~~---------~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~-----~ 149 (455)
++++ .+++.|+++|++.|..++...++++|++|+|+|+++.+..+.+...|..+++.+...+... .
T Consensus 113 ~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 192 (432)
T PRK10406 113 LPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAEL 192 (432)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 4433 5899999999999999999999999999999999999999998889988888776555420 0
Q ss_pred cCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHH
Q psy3467 150 FAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHM 229 (455)
Q Consensus 150 ~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (455)
...|||+.|++.++++++. +......||+|+++ ++. +++..++++++|+++.+...+...
T Consensus 193 ~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~-------~~~------------~~~~~~~~~l~~~~~~~~~~~~~~ 252 (432)
T PRK10406 193 REWGWRIPFALGAVLAVVA-LWLRRQLDETSQQE-------TRA------------LKEAGSLKGLWRNRRAFIMVLGFT 252 (432)
T ss_pred hccchHHHHHHHHHHHHHH-HHHHhcCCCCchHH-------Hhh------------hcccccHHHHHhhHHHHHHHHHHH
Confidence 0179999999877776653 33334455543321 000 011235688888888776665544
Q ss_pred H-HHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 230 G-QNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+ .....+....+.|.++++.+|++..+.+...........+++++.|+++||++||+.
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~ 311 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS 311 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 4 356677788999999988789998888888888888888889999999999998853
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=4.6e-24 Score=209.32 Aligned_cols=258 Identities=13% Similarity=0.144 Sum_probs=191.9
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh----hhH-HHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH----SIL-ALSII 92 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~----~~~-~~~~~ 92 (455)
+...+|.+.++ |+++++.+++.+.+.++..+++++.|+++||+| ..+....+..+........ +++ .+++.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 44556666777 999999999999999999999999999999999 3333333333333333322 345 78899
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHH-HHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGT-VFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~-~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
|++.|++.+...+.....+.|++|+|+|++++++.+.+.++|. ..+|+++..+... .+||+.|++.+++.++..++
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF---NDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888899999999999999999999999986 4566654444444 69999999998888776777
Q ss_pred hhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCCh-----hhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 172 FLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPW-----KDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 172 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
..+++||+|++.+..++++.+. +..++.+.+ +++..+. +.++|++.++...+..++.+...+....+.|.|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l 280 (452)
T PRK11273 204 AFAMMRDTPQSCGLPPIEEYKN--DYPDDYNEK-HEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYL 280 (452)
T ss_pred HHHHccCCHhhcCCCChhhhhh--ccccccccc-cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888876533222211110 000000000 1111112 2367889999888888888888888889999999
Q ss_pred HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 247 KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
+++.|++..+.+.......++..++.++.|+++||++++
T Consensus 281 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 281 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 998899999999888888899999999999999999643
No 31
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=5.3e-24 Score=209.67 Aligned_cols=266 Identities=13% Similarity=0.107 Sum_probs=194.9
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
.+.+........+.+|.+.+|+|++.++.+++.+.+.+++.+++++.|+++||+| .......+..+.......+++.
T Consensus 45 ~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~ 124 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA 124 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3334444445667788889999999999999999999999999999999999999 3333333444444445556677
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh----cc--cCCCCchhHHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE----YG--FAGGWPSIFYV 160 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~----~~--~~~~wr~~f~~ 160 (455)
.+++.|+++|++.+.. .....++.|++|+++|++++++.....++|..+++.+.+.+.. .+ ...|||+.|++
T Consensus 125 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i 203 (476)
T PLN00028 125 TGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFV 203 (476)
T ss_pred HHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHH
Confidence 8889999999998764 4466789999999999999999988777888777666654432 10 01489999999
Q ss_pred hhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHh
Q psy3467 161 FGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMT 240 (455)
Q Consensus 161 ~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
.+++.++..++.+++.++.|+.+ .++.+++ . +.++++....+++.+++++++.+.+..+...........
T Consensus 204 ~g~l~l~~~l~~~~~~~~~p~~~--~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (476)
T PLN00028 204 PGLLHIIMGILVLTLGQDLPDGN--YRELKKS----G----TMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDN 273 (476)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCc--hhhHHhc----C----ccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHh
Confidence 99988876666655544444321 1111000 0 000011112345667888888887777666666666778
Q ss_pred hhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 241 ELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 241 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.|.|+.+++|+++.+++.+.+...++..++++++|+++||+++|+.
T Consensus 274 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~ 320 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFG 320 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC
Confidence 89999988789999999999999999999999999999999998753
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=3e-24 Score=208.11 Aligned_cols=278 Identities=14% Similarity=0.156 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~ 82 (455)
...+..+.+......+....+.+++++|.++++.+++.+++.++..+++++.|.++||+| ..+....+..+......
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 95 (405)
T TIGR00891 16 AAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACG 95 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777778888899999999999999999999999999999999999999 44444444455555566
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC--CchhHH
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG--WPSIFY 159 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~--wr~~f~ 159 (455)
+.+++ .+++.|+++|++.+...+...+++.|++|+|+|+++.++.+.+..+|..+++.+++.+.+. .+ ||+.|+
T Consensus 96 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~---~~~~w~~~f~ 172 (405)
T TIGR00891 96 FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV---WGDGWRALFF 172 (405)
T ss_pred HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccHHHHHH
Confidence 66777 9999999999999999999999999999999999999999999999999999999998876 55 999998
Q ss_pred HhhHHHHHHHHHhhhhcccCCCCCCCCChhHHH-HHhhhcccccCCCCC----CCCChhhhhc-C-hhHHHHHHHHHHHH
Q psy3467 160 VFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERK-YIMSSVWGLAGVASS----PPVPWKDIVS-S-LPFWAILIAHMGQN 232 (455)
Q Consensus 160 ~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~-~-~~~~~~~~~~~~~~ 232 (455)
+.++..++ .++.....||+++.++..++++.. ...++..++++..++ ...+.++..+ + +.+..........+
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
T TIGR00891 173 ISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFAN 251 (405)
T ss_pred HHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHH
Confidence 86655544 444455667765422111111000 000000000000000 0001111111 1 11223333334444
Q ss_pred HHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 233 YGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
........+.|.++++++|+++.+.+.+.+...++..++.++.+++.||+++|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 306 (405)
T TIGR00891 252 LYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA 306 (405)
T ss_pred HHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 4455566788999988899999999999999999999999999999999999864
No 33
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=1.9e-24 Score=211.02 Aligned_cols=269 Identities=16% Similarity=0.155 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh
Q psy3467 7 TAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~ 83 (455)
..+..+.+........+..|.+++|+|+|+.+.+++.+++.++..+++++.|+++||+| ..........+.......
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 102 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL 102 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555667778888999999999999999999999999999999999999 444444455555555666
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
++++ .+++.|+++|++.+...+....++.|++|+|+|+++.++.+.+..+|.++++.+.+.+.+. .+||+.|++..
T Consensus 103 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~---~~w~~~f~i~~ 179 (426)
T PRK12307 103 ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA---YGWRAAFFVGL 179 (426)
T ss_pred HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc---CCHHHHHHHHH
Confidence 6777 9999999999999999999999999999999999999999999999999999999988887 89999998754
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHH---HHHHHHHHHHH
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAH---MGQNYGYETLM 239 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 239 (455)
+..++ .+......||+++.++ +..+++.++.+...++...++++++|++.++...... +..........
T Consensus 180 ~~~~~-~~~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (426)
T PRK12307 180 LPVLL-VIYIRARAPESKEWEE-------AKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIF 251 (426)
T ss_pred HHHHH-HHHHHHHCCCChHHHH-------hhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222 2221222233321110 0000000000000011123567788887765443322 22223333456
Q ss_pred hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 240 TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 240 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.|.++++ .|.++.+.+...+...++..+++++.|++.||++||+.
T Consensus 252 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~ 298 (426)
T PRK12307 252 GLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT 298 (426)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 788999988 69999999988888999999999999999999998753
No 34
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=1.1e-23 Score=203.24 Aligned_cols=257 Identities=13% Similarity=0.086 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh
Q psy3467 7 TAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~ 83 (455)
..+..++.......++..+|++.+++|+|+++.+++.+.+.+++.+++++.|+++||+| ..........+.......
T Consensus 12 ~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~ 91 (394)
T PRK03699 12 SFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF 91 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667677777888889999999999999999999999999999999999999999 333333344455555566
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh-cccCCCCchhHHHh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE-YGFAGGWPSIFYVF 161 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~-~~~~~~wr~~f~~~ 161 (455)
++++ .+++.|+++|++.+...+....++.|++|+|+|+++.+..+....+|..++|.+.+.+.. . .+||+.|.+.
T Consensus 92 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~gw~~~f~~~ 168 (394)
T PRK03699 92 SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS---IEWYWVYACI 168 (394)
T ss_pred cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHH
Confidence 6777 899999999999998889999999999999999999999999999999999999887754 4 6999999988
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhh
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTE 241 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (455)
+++.++..++.++ ++.|+.+++.++++ +++. ++ ..++.++...+..++.....+....+
T Consensus 169 ~~~~~~~~~~~~~--~~~p~~~~~~~~~~--------------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK03699 169 GLVYVAIFILTLF--SEFPALGKHAPKAD--------------KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISW 227 (394)
T ss_pred HHHHHHHHHHHHh--cCCccccccCcccc--------------Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777664443322 23232111100000 0000 11 12356666666667766777788899
Q ss_pred hhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 242 LPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 242 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.|.|+++++|+|+.+.+.+.+.+.++..++.++.+++.||+++|+.
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 273 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI 273 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Confidence 9999988899999999999999999999999999999999999864
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=3.1e-24 Score=204.87 Aligned_cols=263 Identities=12% Similarity=0.054 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhh
Q psy3467 9 YSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHS 85 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~ 85 (455)
...++...........+|...+|++.++.+.+++.+++.++..+++++.|+++||+| ..+....+..+........+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 85 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVA 85 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 344444454555555666677788999999999999999999999999999999999 33333333333333333333
Q ss_pred -----hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHH
Q psy3467 86 -----IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFY 159 (455)
Q Consensus 86 -----~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~ 159 (455)
+. .+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..++|.+++.+.+. .+||+.|+
T Consensus 86 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g~~~~~~ 162 (365)
T TIGR00900 86 LLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT---LGIKWAIW 162 (365)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHH
Confidence 66 8999999999999999999999999999999999999999999999999999999999988 89999999
Q ss_pred HhhHHHHHHHHHhhhhc-ccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHH
Q psy3467 160 VFGLVGAVWSVAFLLYC-YEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETL 238 (455)
Q Consensus 160 ~~~~~~~~~~i~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (455)
+.++..++..+..+... ||++++++ .+.+++. . ++....+++++|+|.++......++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (365)
T TIGR00900 163 VDAVGFAISALLIVSVRIPELAASEI-QALSNAV-L-----------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPA 229 (365)
T ss_pred HHHHHHHHHHHHHHhcccccCCCccc-cccchhH-H-----------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 88776665444333322 22222111 1101000 0 011223567788888888877777777766666
Q ss_pred H-hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 239 M-TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 239 ~-~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
. .+.|.+.++.+|.++.+.+.......++..++.++.+++.||.++|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 279 (365)
T TIGR00900 230 IVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL 279 (365)
T ss_pred HHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH
Confidence 6 788988888789999999999999999999999999999999988753
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.93 E-value=1.2e-23 Score=201.05 Aligned_cols=257 Identities=9% Similarity=0.078 Sum_probs=191.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccCc-ccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH
Q psy3467 5 QHTAYSIFVSRVINTKLTRRVHHKDG-SFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV 80 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~ 80 (455)
....++..++..+-...++..+.+.+ |+|+|++|.+++.+++.+++.++.++.|.+.||+| +......+..+....
T Consensus 37 ~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~ 116 (462)
T PRK15034 37 WISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVW 116 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 34455566666666777777777655 89999999999999999999999999999999999 333333333444444
Q ss_pred HHhh-----hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH-----hc-
Q psy3467 81 AAGH-----SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS-----EY- 148 (455)
Q Consensus 81 ~~~~-----~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~-----~~- 148 (455)
..++ +++ .+++.|++.|++ +..++.....+++|+|+|+||+++++.....++|..+++.+...+. +.
T Consensus 117 ~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~ 195 (462)
T PRK15034 117 LGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFL 195 (462)
T ss_pred HHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4443 677 999999999998 6688999999999999999999999998777777776666655433 11
Q ss_pred ---------ccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcCh
Q psy3467 149 ---------GFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSL 219 (455)
Q Consensus 149 ---------~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (455)
+...+||.+.++..++.++..++.+++.++.++.+ ....+.++.+|+|
T Consensus 196 G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~-----------------------~~~~~~~~vlk~~ 252 (462)
T PRK15034 196 GVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSR-----------------------ASIADQLPVLQRL 252 (462)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-----------------------cCHHHHHHHhCCC
Confidence 01135788888887877776666666655533211 1112236789999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.|.+.+.+++.+..+.++..++|.|.++.+ +............+...+.++++|+++||+|+|++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v 318 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV 318 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH
Confidence 9999999999999999999999999998865 33322222333456778888999999999999865
No 37
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=1.9e-23 Score=206.45 Aligned_cols=277 Identities=19% Similarity=0.177 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh
Q psy3467 7 TAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~ 83 (455)
.....++.......+.+.+|.+.+|+|.+..+.+++.+.+.++..++.+++|+++||+| ..+....+..+....+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 94 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL 94 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 44455566666666777788888999999999999999999999999999999999999 333334444444445556
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
+++. .+++.|+++|++.+...+....++.|++|+++|+++.+......++|..++|.+++.+.++ .+||+.|++..
T Consensus 95 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~---~gw~~~f~~~~ 171 (471)
T PRK10504 95 SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY---ASWHWIFLINI 171 (471)
T ss_pred hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh---ccHHHHHHHHH
Confidence 6667 8899999999999999999999999999999999999999999999999999999999998 89999999988
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHH-----------hhhcc-----------------------cccCCCCCC
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYI-----------MSSVW-----------------------GLAGVASSP 208 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~-----------~~~~~-----------------------~~~~~~~~~ 208 (455)
+...+..+......|+.+..+++.+....... .+... .++++.+++
T Consensus 172 ~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (471)
T PRK10504 172 PVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRA 251 (471)
T ss_pred HHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 87777666666666665443332222111000 00000 001111223
Q ss_pred CCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 209 PVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..+ .+++|||.+.......++..........+.|.|++..+|.++.+.++......++..++.++.+++.||+++|+.
T Consensus 252 ~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~ 329 (471)
T PRK10504 252 LFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV 329 (471)
T ss_pred ccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 334 358899999888888888777777777888999988789999999999888888888888999999999998864
No 38
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.92 E-value=2.3e-24 Score=217.33 Aligned_cols=275 Identities=16% Similarity=0.238 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHh
Q psy3467 10 SIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~ 83 (455)
..+.....+......+++++++|+++.++.|++.+.+.++++++.++.+++.||+| ..++..++..+...+..+
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 34445556677888889999999999999999999999999999999999999999 444444444444332210
Q ss_pred ------------------------------------------------hhhH-HHHHHHHHHhhcccCchhhHHHHHhcc
Q psy3467 84 ------------------------------------------------HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKW 114 (455)
Q Consensus 84 ------------------------------------------------~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~ 114 (455)
...+ .++++|+++|+|.+..++...+++.|+
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~ 200 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDF 200 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhcc
Confidence 0024 788999999999999999999999999
Q ss_pred cCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccC-------------C------CCchhHHHhhHHHHHHHHHhhhh
Q psy3467 115 IPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFA-------------G------GWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 115 ~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~-------------~------~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
+|+++|++++++++.+..+|..+|+++++.+.+...+ . .||..|++.+++.++..++.+ +
T Consensus 201 ~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~ 279 (633)
T TIGR00805 201 AKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-F 279 (633)
T ss_pred CCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999998764110 0 266678888888777565544 4
Q ss_pred cccC-CCCCCCCCh--hHHHHHhhhcccccCC----CCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 176 CYEE-PEAHPNIAE--DERKYIMSSVWGLAGV----ASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 176 ~~e~-~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
+|++ |+.+.+.+. .+++...+...+...+ .++.....+++++||.++...+..++.....+.+..++|.|+++
T Consensus 280 ~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~ 359 (633)
T TIGR00805 280 FPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLEN 359 (633)
T ss_pred CccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4543 332211111 1110000000000000 00112345678999999999999999999999999999999999
Q ss_pred HhcCccccchhhchhHHH-HHHHHHHHHHHHHHHhhhc
Q psy3467 249 VLHFNIKENGTLSALPYL-AMWIFSMFASFIADSMITS 285 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r 285 (455)
++|+++.+++++.....+ +..++.+++|++.||++.+
T Consensus 360 ~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 360 QYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 999999999999887665 5688999999999999865
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=8.5e-23 Score=195.86 Aligned_cols=254 Identities=13% Similarity=0.063 Sum_probs=191.7
Q ss_pred HHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H-HHHH-HHHHHHHHHHHHhhh
Q psy3467 11 IFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I-GMLI-NSVFAFLVPVAAGHS 85 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~-~l~~-~~~~~~~~~~~~~~~ 85 (455)
.+..........|.+|. +++++|.|+++.|++.+.+.+...+.+++.|.++||+| . .+.. .....+.......++
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 85 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR 85 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc
Confidence 44444555555566665 56789999999999999999999999999999999999 2 2322 223333444556667
Q ss_pred hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhH--HHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 86 IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRL--GAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 86 ~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~--~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
++ .+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..++|.+++.+.+. .+||+.|++.+
T Consensus 86 ~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~---~~~~~~f~~~~ 162 (375)
T TIGR00899 86 NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG---FGFTVMFLTAA 162 (375)
T ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh---cccHHHHHHHH
Confidence 77 788899999988888888889999999887777754 5788888999999999999999887 89999999998
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
++.++..++.++++||.|+++++.+ +..+.++.+++++++......++.+........+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGAL--------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINM 222 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCccccc--------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhh
Confidence 8877766666777888654322100 01122345666666665555555555555566778
Q ss_pred hHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 243 PTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
|.++++++|.++.+.+...........++.++.|++.||+++|+.
T Consensus 223 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 267 (375)
T TIGR00899 223 PLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL 267 (375)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH
Confidence 889888899999999988777777778888999999999998864
No 40
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.92 E-value=2.9e-23 Score=202.88 Aligned_cols=258 Identities=14% Similarity=0.145 Sum_probs=189.9
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh----hhhH-HHHHHHHHH
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG----HSIL-ALSIIRFIQ 96 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~----~~~~-~~~~~r~l~ 96 (455)
.|.+++ +|.++++.+++.+++.++..+++++.|+++||+| .......+..+....... .++. .+.+.|++.
T Consensus 50 ~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 128 (438)
T TIGR00712 50 MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLN 128 (438)
T ss_pred hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 444444 5999999999999999999999999999999999 222222222233222222 2345 778899999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH-hcccCCCCchhHHHhhHHHHHHHHHhhhh
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS-EYGFAGGWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~-~~~~~~~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
|++.+...+.....+.|++|+|+|++++++.+.+.++|..+++.+.+... .. .+||+.|++.++++++..++.+++
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF---NDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988776544 34 689999999998888877777778
Q ss_pred cccCCCCCCCCChhHHHH-HhhhcccccCCCCCCCCC-hhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCc
Q psy3467 176 CYEEPEAHPNIAEDERKY-IMSSVWGLAGVASSPPVP-WKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFN 253 (455)
Q Consensus 176 ~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 253 (455)
+||+|++++..+.++.+. ..++..++++++.+.+.. .+.++|++.++...+..++.+...+....+.|.|+++.+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s 285 (438)
T TIGR00712 206 MRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFA 285 (438)
T ss_pred ccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCC
Confidence 888765432111111000 000000000000000011 124678888888888777777777888899999999988999
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
+.+.++......++..++.+.+|++.||+++++
T Consensus 286 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 286 LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999997653
No 41
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=3.3e-23 Score=209.53 Aligned_cols=174 Identities=14% Similarity=0.196 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
++..+.+......+...+|.+.++++++..+.+++.+++.++.+++++++|+++||+| ..++...+..++..+..++
T Consensus 173 ~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa 252 (742)
T TIGR01299 173 GLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV 252 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444555667778888899999999999999999999999999999999999 4444445555555566667
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc----------cCCC
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG----------FAGG 153 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~----------~~~~ 153 (455)
+++ .++++|+++|++.+...+...+++.|++|+++|++.++++..+..+|.++++.++..+.... ...+
T Consensus 253 ~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~g 332 (742)
T TIGR01299 253 QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHS 332 (742)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccccc
Confidence 777 99999999999999999999999999999999999999999999999999999887765420 0136
Q ss_pred CchhHHHhhHHHHHHHHHhhhhcccCCCC
Q psy3467 154 WPSIFYVFGLVGAVWSVAFLLYCYEEPEA 182 (455)
Q Consensus 154 wr~~f~~~~~~~~~~~i~~~~~~~e~~~~ 182 (455)
||+.+++.+++.++ .++..+++||+|++
T Consensus 333 WR~l~~i~~lp~ll-~ll~~~~lPESPrw 360 (742)
T TIGR01299 333 WRVFVIVCAFPCVF-AIGALTFMPESPRF 360 (742)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHcCCCHHH
Confidence 89998887776655 56667889999875
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=8.1e-24 Score=209.75 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=168.3
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh------------hhhH-HHHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG------------HSIL-ALSII 92 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~------------~~~~-~~~~~ 92 (455)
.++++.++++.+++.+++.++..++++++|+++||+| ..++...+..+....+.. .+.+ .+++.
T Consensus 47 ~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 126 (479)
T PRK10077 47 NLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIY 126 (479)
T ss_pred cccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHH
Confidence 3445889999999999999999999999999999999 333333333333333332 1224 77899
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc-----cCCCCchhHHHhhHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG-----FAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~-----~~~~wr~~f~~~~~~~~~ 167 (455)
|+++|++.|...+...++++|++|+|+|++++++.+.+..+|..+++.++..+.... ...|||+.|++.+++.++
T Consensus 127 R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~ 206 (479)
T PRK10077 127 RIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALL 206 (479)
T ss_pred HHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988877664210 116899999998887777
Q ss_pred HHHHhhhhcccCCCCCCCCC-hhHHHHHhhhcccccCCCCCCCCChhhhhc-----ChhH-----HH----HHHHHHHHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIA-EDERKYIMSSVWGLAGVASSPPVPWKDIVS-----SLPF-----WA----ILIAHMGQN 232 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~----~~~~~~~~~ 232 (455)
.. +..+++||+|++...++ +++.+...++..+.++. ++...+.++.++ .+.. .. .....+...
T Consensus 207 ~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (479)
T PRK10077 207 FL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQF 284 (479)
T ss_pred HH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHH
Confidence 44 44677899876421111 11111111110000000 000000011110 0000 00 111112222
Q ss_pred HHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 233 YGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
...+....+.|.+.++ .|.+..+........++...++.++++++.||+|||+.
T Consensus 285 ~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~ 338 (479)
T PRK10077 285 VGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL 338 (479)
T ss_pred hChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH
Confidence 2233445566777666 78888777777777888899999999999999998854
No 43
>KOG1330|consensus
Probab=99.92 E-value=5.7e-25 Score=201.84 Aligned_cols=270 Identities=15% Similarity=0.195 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~ 82 (455)
.....+.+..+....++-..+++++.+|++++..|++++.+.+.+++.+|+.|+++|||. +...+..+...+...++
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~ 116 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG 116 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH
Confidence 345556677777777888899999999999999999999999999999999999999999 33333344444444455
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF 161 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~ 161 (455)
+.+.+ +++++|.+.|+|.+...|+++++++|.+|.++|++.+++++.+.++|..+|.+.+..+.+.. ..|||.|+..
T Consensus 117 fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~--~~Wr~af~~~ 194 (493)
T KOG1330|consen 117 FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT--FWWRWAFRGS 194 (493)
T ss_pred HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc--cceEEEEEee
Confidence 55666 99999999999999999999999999999999999999999999999999999999998861 3499999999
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhh
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTE 241 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (455)
+++++++.++.+++.+|+++..+.+.+.+.+. .........+.+.+.+++.+....+.+....+....+.-+
T Consensus 195 avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~--------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww 266 (493)
T KOG1330|consen 195 AVLGVIVGLLVFLFVREPERGARDEVDGENKM--------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWW 266 (493)
T ss_pred hHHHHHHHHHHHhhccCcccccccccccCCcC--------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchh
Confidence 99999999999999998665422111111000 0000112234455566677666666666666666666677
Q ss_pred hhHHHHHH---hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 242 LPTFMKQV---LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 242 ~~~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
.|.+.... .|.+..+..++..+...++.+|.+++|.++||+.++
T Consensus 267 ~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~ 313 (493)
T KOG1330|consen 267 APAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRI 313 (493)
T ss_pred hhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHh
Confidence 77665432 345666666667778889999999999999998773
No 44
>PRK10133 L-fucose transporter; Provisional
Probab=99.92 E-value=6.2e-23 Score=199.67 Aligned_cols=261 Identities=13% Similarity=0.129 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH---HHhh
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV---AAGH 84 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~---~~~~ 84 (455)
.++-..........+|++++++|+|+++.++..+.+.+++.+++++.|+++||+| .......+..+.... ...+
T Consensus 35 ~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a 114 (438)
T PRK10133 35 FFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI 114 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444444555666678889999999999999999999999999999999999999 333333444444433 2456
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc--------------
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG-------------- 149 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~-------------- 149 (455)
+++ .++++|+++|+|.+...+..+.++.|+.++++|.+.+++.+....+|..+++.+++.+....
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~ 194 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTP 194 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccCh
Confidence 677 99999999999999999999999999877777777899999999999999999987654110
Q ss_pred -----c----CCCCchhHHHhhHH-HHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcCh
Q psy3467 150 -----F----AGGWPSIFYVFGLV-GAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSL 219 (455)
Q Consensus 150 -----~----~~~wr~~f~~~~~~-~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (455)
. ..+||++|+....+ .++..+......||.+++++ + +++ ..+...+.++++|+|
T Consensus 195 ~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~--~-~~~-------------~~~~~~~~~~ll~~~ 258 (438)
T PRK10133 195 EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH--S-DAK-------------QGSFSASLSRLARIR 258 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--c-ccc-------------ccchhhhHHHHHhCc
Confidence 0 02466666543333 33322222223343211110 0 000 011123346888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFM-KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++...+..++..........+.+.|+ ++.+|.++.+.+.....+.++..+++++++++.||+++|+.
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~ 327 (438)
T PRK10133 259 HWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 888777777777777777778888885 66689999999999999999999999999999999999854
No 45
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=9.6e-23 Score=202.63 Aligned_cols=254 Identities=13% Similarity=0.102 Sum_probs=170.1
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhh------H-HHHHHHHHHhhccc
Q psy3467 32 FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSI------L-ALSIIRFIQGLGEG 101 (455)
Q Consensus 32 ~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~------~-~~~~~r~l~G~~~~ 101 (455)
.+.++.+.+++.+.+.++..+++++.|+++||+| .......+..+....+..+++ + .++++|+++|++.+
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 3456678899999999999999999999999999 333333334444444444333 5 89999999999999
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc--------------------cCCCCchhHHHh
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG--------------------FAGGWPSIFYVF 161 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~--------------------~~~~wr~~f~~~ 161 (455)
...+....++.|++|+|+|+++.++.+....+|..+++.++..+...- ...+||+.+.+.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 999999999999999999999999999999999999999887654210 013799999887
Q ss_pred hHHHHHHHHHhhhhcccCCCCC---CCCChhHHHHHhhhcc---cccC--------CCCCCCCChhhhhcC---hhH---
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAH---PNIAEDERKYIMSSVW---GLAG--------VASSPPVPWKDIVSS---LPF--- 221 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~---~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~---~~~--- 221 (455)
++++++ ..+..+++||+|++. ++.+++.++...+... +++. ++++.+.++++++++ ++.
T Consensus 211 ~ip~~i-~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 211 AVPALL-ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKH 289 (502)
T ss_pred HHHHHH-HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHH
Confidence 777666 555567889999852 2221111111111100 0000 001112356777653 121
Q ss_pred -HHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchh------------hchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 222 -WAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGT------------LSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+......+......++...+.|.++++ .|++..+.+. ......++.+++.++++++.||+|||+.
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~ 367 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI 367 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH
Confidence 112223334444555667778888876 6887654321 1223344566788889999999999864
No 46
>PRK11043 putative transporter; Provisional
Probab=99.91 E-value=1e-22 Score=197.06 Aligned_cols=251 Identities=16% Similarity=0.179 Sum_probs=195.0
Q ss_pred HHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-
Q psy3467 12 FVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL- 87 (455)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~- 87 (455)
.........+.|.+|++.+++|.++++.+++.+++.++..++++++|+++||+| ..+....+..+........+++
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 95 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA 95 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 334445566677788889999999999999999999999999999999999999 3333333444444455556677
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+++.|+++|++.+...+...+++.|++++++|++..+.......+|..++|.+++.+.+. .+||+.|++.+++.++
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH---FGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHH
Confidence 8899999999998888888889999999999999999999989999999999999999988 8999999998888777
Q ss_pred HHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMK 247 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (455)
..++.+ +.+|+++++++ ++++.++++++|+|+++...+...+..........+.|.+.+
T Consensus 173 ~~~~~~-~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 231 (401)
T PRK11043 173 LILPTL-RLKPSKKARKQ--------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE 231 (401)
T ss_pred HHHHHH-HcCCCCCcccc--------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 555444 34443321110 011123467788888776555555555555666778888887
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+ +|+++.+.++......++..++.+..+++.||+++|+.
T Consensus 232 ~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~ 270 (401)
T PRK11043 232 Q-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQL 270 (401)
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 6 79999999988777788888999999999999988753
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=1.7e-22 Score=195.18 Aligned_cols=271 Identities=20% Similarity=0.250 Sum_probs=197.2
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
.+.+...........|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+| .......+..+........+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (398)
T TIGR00895 26 MLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNV 105 (398)
T ss_pred HHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccch
Confidence 3344444455666778888999999999999999999999999999999999999 3333333344444445556677
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGA 166 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~ 166 (455)
.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|..+++.+++.+.+. .+||+.|++.+++.+
T Consensus 106 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~ 182 (398)
T TIGR00895 106 TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV---FGWRSLFYVGGIAPL 182 (398)
T ss_pred HHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc---ccceeehhhhhhHHH
Confidence 8899999999999999999999999999999999999999999999999999999999887 899999999877777
Q ss_pred HHHHHhhhhcccCCCCCCCCChhHHHHH-hh---hccccc----CCCCC----CCCChhhhhcC---hhHHHHHHHHHHH
Q psy3467 167 VWSVAFLLYCYEEPEAHPNIAEDERKYI-MS---SVWGLA----GVASS----PPVPWKDIVSS---LPFWAILIAHMGQ 231 (455)
Q Consensus 167 ~~~i~~~~~~~e~~~~~~~~~~~~~~~~-~~---~~~~~~----~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~ 231 (455)
+..++...++||+++...+.++++++.. ++ +..+++ .++++ .+...+.++++ +..+.+.+..++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (398)
T TIGR00895 183 LLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFML 262 (398)
T ss_pred HHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 6677777778887653222222111111 10 000000 00000 11112223332 2334444455555
Q ss_pred HHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 232 NYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
.........+.|.+.+ ++|.++.+.+...+...++..++.++.+++.||+++|
T Consensus 263 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 263 LVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 6666667778885554 4899999999999999999999999999999999987
No 48
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=2e-22 Score=196.74 Aligned_cols=230 Identities=15% Similarity=0.078 Sum_probs=161.7
Q ss_pred HHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH---------HHHHHHHHHhhcccCchhhHHHHH
Q psy3467 44 SSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL---------ALSIIRFIQGLGEGPIVPCTHALL 111 (455)
Q Consensus 44 s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~---------~~~~~r~l~G~~~~~~~~~~~~~i 111 (455)
++..++..+++++.|+++||+| ..+....+..+....+++++++ .+++.|+++|++.|..++....++
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 150 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLA 150 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 3556777899999999999999 4444555555566666666665 388899999999999999999999
Q ss_pred hcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc-----cCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCC
Q psy3467 112 AKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG-----FAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNI 186 (455)
Q Consensus 112 ~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~-----~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~ 186 (455)
.|++|+|+|++..+..+.+..+|..++..+...+.... ...|||+.|++.+++.++ .+......||+|+..+.
T Consensus 151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~~~~~~- 228 (438)
T PRK09952 151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESAEFEQQ- 228 (438)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCChhHHHH-
Confidence 99999999999999999999999999887776664310 016999999988776544 33333345555432111
Q ss_pred ChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHH-HHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHH
Q psy3467 187 AEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILI-AHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPY 265 (455)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~ 265 (455)
++ +. + +++++....+.++|+|+.+.... ..++.....+....+.|.|.++.+|.+..+........+
T Consensus 229 ----~~---~~-~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g 296 (438)
T PRK09952 229 ----QH---EQ-A----AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVG 296 (438)
T ss_pred ----Hh---hc-c----cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00 00 0 00111112234667776665543 345556667777889999998888888876555555566
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q psy3467 266 LAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 266 ~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
....++.++.|+++||++||+.
T Consensus 297 ~~~~i~~~~~g~l~Dr~grr~~ 318 (438)
T PRK09952 297 GLSCLTIPCFAWLADRFGRRRV 318 (438)
T ss_pred HHHHHHHHHHHHHHHHhCchHH
Confidence 7778888899999999999854
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.91 E-value=2.9e-22 Score=193.74 Aligned_cols=246 Identities=12% Similarity=0.019 Sum_probs=183.6
Q ss_pred hhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHH---Hh-hhhH-HHHHHHHH
Q psy3467 24 RVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVA---AG-HSIL-ALSIIRFI 95 (455)
Q Consensus 24 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~---~~-~~~~-~~~~~r~l 95 (455)
.++...+|+|.|+++.+++.+.+.++..+++++.|+++||+| .......+..+..... .. .+++ .+++.|++
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 114 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGI 114 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence 344455788999999999999999999999999999999999 2233333333322221 22 2355 78889999
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHH-HHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGT-VFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~-~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
+|++.+...+.....+.|++|+|+|++++++.+.+.++|. .++|.+++.+.+. .||+..++.......+..++..+
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA---FGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cchHHHHHHHHHHHHHHHHHHHh
Confidence 9999888888888889999999999999999999999997 6899999888876 78776666544443343444444
Q ss_pred hcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcc
Q psy3467 175 YCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNI 254 (455)
Q Consensus 175 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 254 (455)
+.+|.++.+++.+ +++ .++....+++++|+|.++...+..++.....+....+.|.|.++ +|+++
T Consensus 192 ~~~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~ 256 (402)
T TIGR00897 192 SNKDIFTPQHMQT-REK-------------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFST 256 (402)
T ss_pred ccCCCCCcccccC-Ccc-------------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCh
Confidence 4554322111100 000 01111234678899999888888888888888888999999876 89999
Q ss_pred ccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 255 KENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.+.......++..++.+..|++.||++||+.
T Consensus 257 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 289 (402)
T TIGR00897 257 SEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT 289 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 999988888999999999999999999998753
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=4.7e-22 Score=192.01 Aligned_cols=251 Identities=20% Similarity=0.226 Sum_probs=195.6
Q ss_pred HHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-
Q psy3467 12 FVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL- 87 (455)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~- 87 (455)
.+..+......+.+|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+| ..........+........+++
T Consensus 18 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 97 (394)
T PRK11652 18 AVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLT 97 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 344455566667788889999999999999999999999999999999999999 3334444444444455556677
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+++.|+++|++.+...+....+..|.+++++|+++.+..+.+..+|..++|.+++.+.+. .|||+.|++.++..++
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL---FGWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChHHHHHHHHHHHHH
Confidence 8999999999999888888889999999999999999999999999999999999999887 8999999998877776
Q ss_pred HHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMK 247 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (455)
..++..++.||+++++++.++ ...++++.+|+|+++...+..+.............+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK11652 175 VTFSMARWMPETRPADARRTR-------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMG 235 (394)
T ss_pred HHHHHHHhCCccCccccchhH-------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 566666677776543221100 1123466778887776665555555555556677788888
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
+.+|.++.+.++......++..++.++.+++.||.++
T Consensus 236 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 236 AVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999998888777777777888888888888773
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.91 E-value=3.3e-22 Score=191.99 Aligned_cols=256 Identities=18% Similarity=0.047 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH
Q psy3467 4 VQHTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV 80 (455)
Q Consensus 4 v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~ 80 (455)
+.......++.......+.+.+|.+.+|+|.|+++.|++.+.+.++..+++++.|+++||+| .......+..+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777777888889999999999999999999999999999999999999999 344444444555555
Q ss_pred HHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHH
Q psy3467 81 AAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFY 159 (455)
Q Consensus 81 ~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~ 159 (455)
...++++ .+++.|+++|++.+...+...+.+.|..++++|+++++....+.++|..+||.+++.+.+. ..|+. .+
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~-~~ 163 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE---LMSVL-PW 163 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---ccchH-HH
Confidence 5666777 9999999999999988888888888999999999999999999999999999999998764 33333 33
Q ss_pred HhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHH
Q psy3467 160 VFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLM 239 (455)
Q Consensus 160 ~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (455)
..+..... .+.. .+.+.++++++ +++..+.++.+|+|.++......+..........
T Consensus 164 ~~~~~~~~-~~~~-~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (381)
T PRK03633 164 VTGLVLAA-ILPL-LFTRILNQQAE---------------------NHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLY 220 (381)
T ss_pred HHHHHHHH-HHHH-HHhcccCCCCC---------------------CCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 33322222 1111 12222211110 0011234667788777655444444444455566
Q ss_pred hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 240 TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 240 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++|.|.++ .|.++.+.+...+...++..+++++.|++.||+++|+.
T Consensus 221 ~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 267 (381)
T PRK03633 221 GLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV 267 (381)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH
Confidence 788999987 69999999998888899999999999999999998854
No 52
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.91 E-value=1.6e-22 Score=192.44 Aligned_cols=242 Identities=14% Similarity=0.066 Sum_probs=186.1
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHH
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRF 94 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~ 94 (455)
..+.+.+|.+++|+|.|+++.+++.+++.++..+++++.|+++||+| ..+.......+..... ..++. .+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999 3333333333333333 44556 8889999
Q ss_pred HHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
+.|++.+...+.....+.|+++ ++|+++.+..+.+.++|..+++.+++.+.+... .+||+.|...+.+.++.. ..
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-~~w~~~f~~~~~~~~~~~---~~ 170 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-GHWQQALAWWALPALLAL---LA 170 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHH---HH
Confidence 9999999888888889999886 789999999999999999999999988876510 139999887665544322 23
Q ss_pred hcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcc
Q psy3467 175 YCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNI 254 (455)
Q Consensus 175 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 254 (455)
++||.++++++.+ +++..+.++++|+|.++...+..++..........+.|.++++ .|+++
T Consensus 171 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~ 231 (355)
T TIGR00896 171 WIPQVRRRVAANQ------------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASA 231 (355)
T ss_pred HhhhhccccCCCC------------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 3454432211000 1111234677888888877777777777777888899999987 79999
Q ss_pred ccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 255 KENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
.+.+...+...++..+++++.|++.||+++|
T Consensus 232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 232 ATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 9999999999999999999999999999654
No 53
>PRK15075 citrate-proton symporter; Provisional
Probab=99.91 E-value=4.2e-22 Score=194.50 Aligned_cols=259 Identities=16% Similarity=0.131 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHH-HHHH-----HHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYV-LSSF-----FYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV 78 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~-~s~~-----~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~ 78 (455)
....+++......+....|.+.+|++.++++.+.. .+.. .++..+++++.|.++||+| ..+....+..+..
T Consensus 21 ~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 100 (434)
T PRK15075 21 TSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGT 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHH
Confidence 34455555555556666777888999888776543 3332 2223478999999999999 4444555555666
Q ss_pred HHHHhhhhH-H--------HHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH---
Q psy3467 79 PVAAGHSIL-A--------LSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS--- 146 (455)
Q Consensus 79 ~~~~~~~~~-~--------~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~--- 146 (455)
..+.+++++ . +++.|+++|++.+...+....++.|++|+|+|++++++.+.+.++|..+++.+++.+.
T Consensus 101 ~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~ 180 (434)
T PRK15075 101 LLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWL 180 (434)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 666666665 2 6889999999999999999999999999999999999999998888888888887763
Q ss_pred -----hcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhH
Q psy3467 147 -----EYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPF 221 (455)
Q Consensus 147 -----~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (455)
+. .|||++|++..+...+ .++.++.+++.+ +..++ ++ +++.+..+++..++++.
T Consensus 181 ~~~~~~~---~gWr~~f~~~~~~~~~-----~~~~~~~~~e~~---~~~~~---~~-------~~~~~~~~~~~~~~~~~ 239 (434)
T PRK15075 181 SPAQMAE---WGWRIPFLIGCLIVPF-----IFLIRRSLEETE---EFLAR---KH-------RPSMREIFRSLAANWRI 239 (434)
T ss_pred CHHHHhc---cchHHHHHHHHHHHHH-----HHHHHHhcCCCH---HHHHh---hh-------ccccccHHHHHHHhHHH
Confidence 33 7999999875433211 122222221110 00000 00 01111223444555554
Q ss_pred HHH-HHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 222 WAI-LIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.. ....+......+....+.|.|+++.+|++..+.++......++..++.++.|++.||++||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~ 306 (434)
T PRK15075 240 VLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV 306 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 433 233344555666788899999998889999998888888889999999999999999998854
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.90 E-value=1.3e-22 Score=200.96 Aligned_cols=273 Identities=17% Similarity=0.182 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhhhhhcccCcccccc--------cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH
Q psy3467 10 SIFVSRVINTKLTRRVHHKDGSFIWT--------TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV 78 (455)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~~s--------~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~ 78 (455)
..++.......+...++.+..+++.+ ..+.+++.+++.++..++++++|+++||+| ..+....+..+..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 115 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGA 115 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHH
Confidence 33444444555566666666666666 889999999999999999999999999999 3333333334443
Q ss_pred HHH---HhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHH---HHhHhcccC
Q psy3467 79 PVA---AGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLS---GLLSEYGFA 151 (455)
Q Consensus 79 ~~~---~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~---~~l~~~~~~ 151 (455)
.++ ....++ .+++.|+++|++.+...+....++.|++|+|+|++++++.+.+..+|..+++.++ ....+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~--- 192 (481)
T TIGR00879 116 ILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT--- 192 (481)
T ss_pred HHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC---
Confidence 333 323334 7899999999999999999999999999999999999999999999999999999 555555
Q ss_pred CCCchhHHHhhHHHHHHHHHhhhhcccCCCCCC--CCChhHHHHHhhhccccc-----------------CCCCCCCCCh
Q psy3467 152 GGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHP--NIAEDERKYIMSSVWGLA-----------------GVASSPPVPW 212 (455)
Q Consensus 152 ~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~--~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 212 (455)
.+||+.|++.++..++ .++..+++||+|+... ...++.++...+....++ .+.+.....+
T Consensus 193 ~~w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (481)
T TIGR00879 193 LGWRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSW 271 (481)
T ss_pred ccHHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccH
Confidence 7999999996655554 5555677888764211 111111111000000000 0000011113
Q ss_pred hhhhc------ChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 213 KDIVS------SLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 213 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
++.++ ++.++...+..+...........+.|.+.++ +|++..+.+.......++..++.++.+++.||++||+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 350 (481)
T TIGR00879 272 GSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP 350 (481)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 33333 2223333333333333334455667777666 7999988888888899999999999999999999886
Q ss_pred c
Q psy3467 287 K 287 (455)
Q Consensus 287 ~ 287 (455)
.
T Consensus 351 ~ 351 (481)
T TIGR00879 351 L 351 (481)
T ss_pred H
Confidence 4
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.90 E-value=9.7e-22 Score=189.62 Aligned_cols=261 Identities=13% Similarity=0.108 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH---HH
Q psy3467 9 YSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV---AA 82 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~---~~ 82 (455)
...++-+.......+.+|.+++++|+|+++.|++.+.+.+++.+++++.|++.||+| ..+.+..+..+.... ..
T Consensus 10 ~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~ 89 (410)
T TIGR00885 10 SLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA 89 (410)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666778888999999999999999999999999999999999999999 333333333333333 23
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc------------
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG------------ 149 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~------------ 149 (455)
..+++ .+++.|++.|+|.+...+....++.+..|+|+|++..++.+...++|..++|.+++.+....
T Consensus 90 ~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~ 169 (410)
T TIGR00885 90 EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKL 169 (410)
T ss_pred hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhc
Confidence 33566 89999999999999999999999999999999999999999999999999999998875321
Q ss_pred -----------cCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcC
Q psy3467 150 -----------FAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSS 218 (455)
Q Consensus 150 -----------~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (455)
...+||++|++.+.+.++..+... +.++ |+.++ +++++ ++...+.++++|+
T Consensus 170 ~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~-p~~~~--~~~~~--------------~~~~~~~~~~~~~ 231 (410)
T TIGR00885 170 SPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKM-PALNH--SDAKQ--------------ISFSASLSRLARI 231 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-CCCCc--ccccc--------------ccchhhHHHHHhC
Confidence 013699999998887766443332 2222 21111 00000 1112234678889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-cCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 219 LPFWAILIAHMGQNYGYETLMTELPTFMKQVL-HFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
|+++...+..++.........++++.|.++.. +.+....+...+....+..+|+++++++.||+++|+.
T Consensus 232 ~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 232 RHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 99888888878877777778888999987632 3333344545566667888999999999999998754
No 56
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=1.7e-21 Score=187.01 Aligned_cols=256 Identities=13% Similarity=-0.001 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H--H--HHHHHHHHHHHHHHHh
Q psy3467 9 YSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I--G--MLINSVFAFLVPVAAG 83 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~--~--l~~~~~~~~~~~~~~~ 83 (455)
...+..........|.+|...+|+|.|.+++|++.+++.+...++++++|+++||+| . . +...+........+..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~ 90 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444556667778888899999999999999999999999999999999999 1 1 1111111111223334
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
++++ .+++.|.++|.+.+...|...++..|+ +|+|++.++......++|.+++|.+++.+.++ .|||..|++..
T Consensus 91 ~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~---~g~~~~f~~~~ 165 (382)
T TIGR00902 91 AHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM---FDEQNILAILT 165 (382)
T ss_pred hhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHH
Confidence 5666 888999999999988899999988765 47899999999999999999999999999998 89999998876
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
....+ .+.. +..+|+++++++.+ ++ ++++..+.++++|+|+++...+..++..........+.
T Consensus 166 ~~~~~-~~~~-~~~~~~~~~~~~~~--~~-------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 166 AGLAF-MLIG-FLIKPTIPPKDAIP--ED-------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS 228 (382)
T ss_pred HHHHH-HHHH-HHcCCCCCCCcccc--cc-------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55333 2222 23344321111100 00 01122346789999999999888888888888888999
Q ss_pred hHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 243 PTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
|.++++ .|.++.+.|.......++.+++....+++.||+++|+.
T Consensus 229 ~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~ 272 (382)
T TIGR00902 229 AIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL 272 (382)
T ss_pred HHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH
Confidence 999987 89999999999888888889999999999999998854
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=9.7e-22 Score=189.12 Aligned_cols=260 Identities=11% Similarity=0.045 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhh
Q psy3467 10 SIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSI 86 (455)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~ 86 (455)
..++.......+....+...+|+|.++.+.+++.+.+.+++.+++++.|+++||+| +.+....+..+....+....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~ 90 (393)
T PRK11195 11 AQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH 90 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 33443333333333344456788889999999999999999999999999999999 333333333333333333333
Q ss_pred HHHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHH
Q psy3467 87 LALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGA 166 (455)
Q Consensus 87 ~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~ 166 (455)
.++.|+++|++.+...|...+++.|++|+|+|++++++.+....+|..+||.+++.+.+. .|+..+.+.+...+
T Consensus 91 --~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~~~~i~~~~~~ 164 (393)
T PRK11195 91 --PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEAALAVCALIYL 164 (393)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999885 37777776655544
Q ss_pred HHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 167 VWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 167 ~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
+ ..+..+.+||+++++++.+++++...++ .....+.++++|.+........+.+..........|.+.
T Consensus 165 ~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK11195 165 L-AALFNLFIPRLGARRPGQSWNPIALLRD-----------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWA 232 (393)
T ss_pred H-HHHHHhcCCCCcccccccCCCHHHHHHH-----------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3444567787654332222111111110 011235677777766555554444555556667778888
Q ss_pred HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 247 KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
++.+|.++.+.|.......++..++.+..+++.||.++|+.
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~ 273 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRV 273 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 88899999999999999999999999999999988776643
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=2.9e-22 Score=199.84 Aligned_cols=254 Identities=15% Similarity=0.132 Sum_probs=183.4
Q ss_pred hhhcccCcccccc---cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHH
Q psy3467 23 RRVHHKDGSFIWT---TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFI 95 (455)
Q Consensus 23 ~~~~~~~~~~~~s---~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l 95 (455)
+..+.+.+|+|++ +.+.+++.+++.++..+++++.|+++||+| ..+....+..+......+++++ .+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4567788999998 899999999999999999999999999999 4444555555556666677888 99999999
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhh
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.++..+ .+||+.|++.+++.++..+. .++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~~wr~~~~~~~i~~~~~~~~-~~~ 262 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI------PDWRWLQLAVSLPTFLFFLL-SWF 262 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHH-HHh
Confidence 99999999999999999999999999999999999999999999998776 56999999998887775444 478
Q ss_pred cccCCCCCCCC--ChhHHHHHhhhcc---------------cccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHH
Q psy3467 176 CYEEPEAHPNI--AEDERKYIMSSVW---------------GLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETL 238 (455)
Q Consensus 176 ~~e~~~~~~~~--~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (455)
+||+|++...+ .++.++..++..+ +++.++++++.++++++|+|.++...+.....++.....
T Consensus 263 ~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (505)
T TIGR00898 263 VPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFS 342 (505)
T ss_pred cCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 89988642111 1111111110000 000001112357788999988877766655544444333
Q ss_pred HhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 239 MTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 239 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
....+.+..+ ++.+.. ......++..+++.++.+++.||+|||+.
T Consensus 343 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~ 387 (505)
T TIGR00898 343 YYGLVLDLGN-LGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYT 387 (505)
T ss_pred HHHHhccccc-cCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 3333333333 454433 22334567778889999999999999854
No 59
>KOG0569|consensus
Probab=99.89 E-value=9.2e-22 Score=187.18 Aligned_cols=245 Identities=18% Similarity=0.251 Sum_probs=186.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHH
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHAL 110 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~ 110 (455)
..+.+.+++.+|.++|++..+.++||+| ...+...+..+....+...+++ +++.+|++.|+..|......+.+
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4688899999999999999999999999 2333333334444556667778 99999999999999999999999
Q ss_pred HhcccCCCcchhHHHHHHhhHHHHHHHHHHHHH--HhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCC--CC
Q psy3467 111 LAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSG--LLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHP--NI 186 (455)
Q Consensus 111 i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~--~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~--~~ 186 (455)
+.|..|++.||......+.+..+|..++..++. .+.+. ..|++.+....+++++ ..+...++||+|++-- +.
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~---~~W~~l~~~~~i~~~~-~l~~l~~~PESPk~Ll~~k~ 216 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTE---DLWPYLLAFPLIPALL-QLALLPFLPESPKYLLIKKG 216 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCC---cchHHHHHHHHHHHHH-HHHHHhcCCCCcchHHHHcC
Confidence 999999999999999999999999999977763 23344 6799999998888877 6666788999998531 11
Q ss_pred ChhHHHHHhhh----------------cccccCCCCCCCCChhhhhcChhHH-----HHHHHHHHHHHHHHHHHhhhhHH
Q psy3467 187 AEDERKYIMSS----------------VWGLAGVASSPPVPWKDIVSSLPFW-----AILIAHMGQNYGYETLMTELPTF 245 (455)
Q Consensus 187 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
+++++++..+. ..++++..+++..+++++++++..+ .+.+..+.+..+.+....|...+
T Consensus 217 ~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i 296 (485)
T KOG0569|consen 217 DEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI 296 (485)
T ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence 22222111000 0011112223667788998876543 33444555666666777888888
Q ss_pred HHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 246 MKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 246 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+++ .|++..++.+.....+....+..+++.++.||.|||+.
T Consensus 297 ~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL 337 (485)
T KOG0569|consen 297 FKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL 337 (485)
T ss_pred HHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence 888 69999999999999999999999999999999999875
No 60
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=1.5e-21 Score=191.25 Aligned_cols=255 Identities=16% Similarity=0.100 Sum_probs=188.2
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHH-HHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALS-IIRFI 95 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~-~~r~l 95 (455)
++..++++.+++|.+.++.+++.+.+.++..++.++.|+++||+| ..+....+..+....+..+++. .++ ..|++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455677888999999999999999999999999999999999999 3444444444555555566666 554 45799
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhh
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
+|++.+...+....++.|+++ ++|+++.++.+.+..+|..++|.+++.+.+. .|||+.|++.+++.++..+..++.
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHh
Confidence 999998777788888999995 8999999999999999999999999999888 899999999988877655554444
Q ss_pred cccCCCCCCCCChhHHHHHhhhccccc----CCCC--CCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 176 CYEEPEAHPNIAEDERKYIMSSVWGLA----GVAS--SPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 176 ~~e~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
.++.+++++...+++ +..+.....++ ...+ .+..+ .+++++|.++......++..........++|.|.++
T Consensus 194 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~- 270 (455)
T TIGR00892 194 RPVGPSQRVSKSKSK-EGLPPDGSTKKLSKKSTAEKINRFLD-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD- 270 (455)
T ss_pred CCCCccccccccccc-ccCCCCCccccccccchhhhhhhhcc-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-
Confidence 443221111000000 00000000000 0000 01112 357888888888887777777777778889999987
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHh
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSM 282 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 282 (455)
.|+++.+.+.+.+..+++..+++++.+++.||.
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 799999999999999999999999999999974
No 61
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=193.06 Aligned_cols=272 Identities=14% Similarity=0.136 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
....+++......+.+.+|.+.+++|+|+.+.+++.+.+.++..+++++.|+++||+| ..+....+..+........
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 105 (496)
T PRK03893 26 WLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA 105 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555566667778888999999999999999999999999999999999999 3333444445555555666
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|++.|++.+...+....++.|++|+|+|+++.++...+..+|..++|.+++.+.+. .+||+.|++..+
T Consensus 106 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~w~~~f~~~~~ 182 (496)
T PRK03893 106 PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV---WGWRALFFIGIL 182 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHH
Confidence 777 9999999999999999999999999999999999999999999999999999999999887 899999987544
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHH-HHHhhhcccccCCCCCCCCCh----------hhhh----------------
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDER-KYIMSSVWGLAGVASSPPVPW----------KDIV---------------- 216 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~---------------- 216 (455)
..++ .+......||+++.+++.+++++ +...+..... +++.... ...+
T Consensus 183 ~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (496)
T PRK03893 183 PIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRG----EHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLL 257 (496)
T ss_pred HHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Confidence 3332 33333445554322111000000 0000000000 0000000 0000
Q ss_pred ---------------cChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHH
Q psy3467 217 ---------------SSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADS 281 (455)
Q Consensus 217 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 281 (455)
+.+.........+...........+.|.|+++++|+++.+.+.+.+...++..++.++.|++.||
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr 337 (496)
T PRK03893 258 CAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW 337 (496)
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011111111111111345688999987789999999999999999999999999999999
Q ss_pred hhhccc
Q psy3467 282 MITSEK 287 (455)
Q Consensus 282 ~g~r~~ 287 (455)
+++|+.
T Consensus 338 ~g~~~~ 343 (496)
T PRK03893 338 LGTRKA 343 (496)
T ss_pred hcchHH
Confidence 998854
No 62
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.89 E-value=6.1e-21 Score=183.22 Aligned_cols=249 Identities=15% Similarity=0.078 Sum_probs=187.1
Q ss_pred HHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H----HHHHHHHHHHHHHHHHhhhhH-HH
Q psy3467 16 VINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I----GMLINSVFAFLVPVAAGHSIL-AL 89 (455)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~----~l~~~~~~~~~~~~~~~~~~~-~~ 89 (455)
.....+.|.+|...+|+|.|.+++|++.+++.++..++++++|+++||+| . ..................++. .+
T Consensus 18 ~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (382)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLL 97 (382)
T ss_pred HHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 34556667777777889999999999999999999999999999999999 1 111111111112223334556 77
Q ss_pred HHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHH
Q psy3467 90 SIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 90 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~ 169 (455)
++.|++.|++.+...+...++..|+ +++|+++.+......++|..+||.+++.+.++ .|||..|++.++..++..
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHH
Confidence 8899999999988999888888876 46788889999999999999999999999998 899999988776544433
Q ss_pred HHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 170 VAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 170 i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
+..++.||++++++ ++++ .++...++++++|+|+++...+..++..........+.|.|.++
T Consensus 173 -~~~~~~~~~~~~~~----~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 234 (382)
T PRK11128 173 -LGQLLRPTIMPQGE----SRQQ------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA- 234 (382)
T ss_pred -HHHHccCCCCCccc----cccc------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-
Confidence 33334444321110 0000 01123467899999999988877777777777777888899876
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.|.++.+.|...+...++..+..++.+++.||+++|+.
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 272 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL 272 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 89999999999888888888889999999999998854
No 63
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.88 E-value=6.1e-21 Score=181.65 Aligned_cols=246 Identities=13% Similarity=0.074 Sum_probs=180.1
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH-----h--H-HHH-HHHHHHHHHHHHHhh---hhH-
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY-----G--I-GML-INSVFAFLVPVAAGH---SIL- 87 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-----G--~-~l~-~~~~~~~~~~~~~~~---~~~- 87 (455)
+.+.+|.+.+|+|+|.++.++..+. .+...+ ++++|+++||+ | . .+. ......+......+. .+.
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 4455667788899999999999766 455554 99999999998 7 2 222 222222232233333 233
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC--------CchhHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG--------WPSIFY 159 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~--------wr~~f~ 159 (455)
.+....++.+.+.+...+...+++.|++|+|+|+++.++...+.++|.++++.+++.+.+. .+ ||..|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~---~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP---EFANTGLITLWGYIFF 161 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh---cccccccccccHHHHH
Confidence 5667777888888888899999999999999999999999999999999999999988876 56 999999
Q ss_pred HhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChh---HHHHHHHHHHHHHHHH
Q psy3467 160 VFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLP---FWAILIAHMGQNYGYE 236 (455)
Q Consensus 160 ~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 236 (455)
+.++..++..+..++..||++++++. ++++++ +...++++++++|. ++...+..++.....+
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQEDASV-PKPLTQ--------------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDS 226 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCccccc-chhHHH--------------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 98887777554445456764332111 111111 01123466677664 6666666666777777
Q ss_pred HHHhhhhHHHHHHhcCccccchhhchhHH-HHHHHHHHHHHHHHHHhhhccc
Q psy3467 237 TLMTELPTFMKQVLHFNIKENGTLSALPY-LAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 237 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
....+.|.|+++ +|+++.+.+.+....+ ++..++.++++++.||+|+|+.
T Consensus 227 ~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 227 AATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 888999999998 8999999998887766 5678999999999999998753
No 64
>PRK12382 putative transporter; Provisional
Probab=99.88 E-value=1.8e-20 Score=180.78 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHH---
Q psy3467 5 QHTAYSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFL--- 77 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~--- 77 (455)
....+..++.........|.+|. +.+|+|.|+++.|++.+++.++..+++++.|+++||+| ..+.......+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (392)
T PRK12382 18 FRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLA 97 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 34445566666666667777775 57889999999999999999999999999999999999 222222222111
Q ss_pred HHHHH-----hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccC
Q psy3467 78 VPVAA-----GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFA 151 (455)
Q Consensus 78 ~~~~~-----~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~ 151 (455)
..... ..+++ .+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..++|.+++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~--- 174 (392)
T PRK12382 98 YLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH--- 174 (392)
T ss_pred HHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 11111 12455 8999999999999988898999999999999999999999999999999999999999887
Q ss_pred CCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHH
Q psy3467 152 GGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQ 231 (455)
Q Consensus 152 ~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (455)
.|||+.+.+..+..++. +.+.++.|+.+++.+ + +.+.++.+| .++...+..++.
T Consensus 175 ~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~------------------~~~~~~~~~--~~~~~~~~~~l~ 228 (392)
T PRK12382 175 FGFAALALTTMVLPLLA----WAFNGTVRKVPAHAG--E------------------RPSLWSVVG--LIWKPGLGLALQ 228 (392)
T ss_pred cChHHHHHHHHHHHHHH----HHHHHhccCCCCCcc--c------------------CchHHHHHH--HHHHhHHHHHHH
Confidence 89998876654443331 122222222111100 0 001122221 111111122223
Q ss_pred HHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 232 NYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.........+.|.++++ .+++ +.+.......++..++++..|++.||+++|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 281 (392)
T PRK12382 229 GVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV 281 (392)
T ss_pred HHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 33444556777888876 4664 34566666778888999999999999998865
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.88 E-value=1.3e-20 Score=181.68 Aligned_cols=237 Identities=18% Similarity=0.198 Sum_probs=172.0
Q ss_pred cccchhhHHHHH-----HHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH---------HHHHHHHHH
Q psy3467 34 WTTAEQGYVLSS-----FFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL---------ALSIIRFIQ 96 (455)
Q Consensus 34 ~s~~~~~~~~s~-----~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~---------~~~~~r~l~ 96 (455)
.++++.+.+.+. ..++..+++++.|+++||+| ..+....+..+........+++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 455666655543 33344578999999999999 3444444444555555555543 378899999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc-----ccCCCCchhHHHhhHHHHHHHHH
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY-----GFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~-----~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
|++.+...+....++.|++++|+|++..+..+.+..+|..+++.++..+... ....+||+.|++.+++.++ ...
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~ 185 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLI-GLY 185 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999999999988766420 0016899999887666554 333
Q ss_pred hhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChh--HHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 172 FLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLP--FWAILIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 172 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
.....||+++.++ +++ ++++...+.++.+++++ ++......++..........+.|.+.+++
T Consensus 186 ~~~~~~~~~~~~~-----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (394)
T TIGR00883 186 LRRNLEETPVFEK-----AQE-----------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT 249 (394)
T ss_pred HHHhcCCChhHHH-----HHh-----------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334455432211 000 00222345567777655 66666666777777777888999999887
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+|.++.+.+.......++..+++++.|++.||++||+.
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV 287 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 89999999999888999999999999999999998853
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.88 E-value=1.4e-20 Score=181.54 Aligned_cols=249 Identities=12% Similarity=0.011 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh
Q psy3467 8 AYSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG 83 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~ 83 (455)
.++.++.........+.++. +++++|.|..+.|++.+...+...+.+++.|+++||+| .......+..+.......
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555554 46789999999999999999999999999999999999 444444444445555555
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
.++. .+++.|+++|++.+...+...+++.|++|+|+|++++++.+...++|..+||.+++.+. . .+||+.|++.+
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~---~g~~~~f~~~~ 171 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q---YDFRLVCATGA 171 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---hhHHHHHHHHH
Confidence 6667 88999999999998888999999999999999999999999999999999999999998 5 79999999988
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
...++..++..++.||.++++. + ++...++++.+|+|+++...+..+..+........+.
T Consensus 172 ~~~~~~~i~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (400)
T PRK11646 172 VLFVLAAAFNAWLLPAYKLSTV---R-----------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLML 231 (400)
T ss_pred HHHHHHHHHHHHhCCccccccc---c-----------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 8777655555555555321100 0 0112235677888887766555444444444455678
Q ss_pred hHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHH
Q psy3467 243 PTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADS 281 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 281 (455)
|.+.++. +.++.+.+.......+.......+.+++.||
T Consensus 232 p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T PRK11646 232 PIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEK 269 (400)
T ss_pred hhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988885 4477788888777776666655555666554
No 67
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.88 E-value=1.5e-20 Score=181.74 Aligned_cols=249 Identities=14% Similarity=0.129 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHH---HHH
Q psy3467 7 TAYSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAF---LVP 79 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~---~~~ 79 (455)
.....++.........+.+|. +++++|.|+++.|++.+++.+++.+++++.|+++||+| ..+....+..+ ...
T Consensus 20 l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~ 99 (399)
T PRK05122 20 IVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYL 99 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 344555555666666667775 56889999999999999999999999999999999999 22222222222 222
Q ss_pred HHHhhh-----hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC
Q psy3467 80 VAAGHS-----IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG 153 (455)
Q Consensus 80 ~~~~~~-----~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~ 153 (455)
.....+ ++ .+++.|+++|++.+...+....++.|++|+|+|+++.++.+.+..+|..+++.+++.+.++ .|
T Consensus 100 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g 176 (399)
T PRK05122 100 LAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW---GG 176 (399)
T ss_pred HhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc---cc
Confidence 222221 34 7899999999999999999999999999999999999999999999999999999999888 89
Q ss_pred CchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHH
Q psy3467 154 WPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNY 233 (455)
Q Consensus 154 wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
||+.+++.++..++..+ +.++.|+.+++. ++ +.++++.+|+ .+.......+...
T Consensus 177 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~------------------~~~~~~~~~~--~~~~~~~~~~~~~ 230 (399)
T PRK05122 177 LAGLGLLIMLLALLGLL----LARPRPAVPPVK--GE------------------RLPFRRVLGR--VWPYGMGLALASI 230 (399)
T ss_pred HHHHHHHHHHHHHHHHH----HHhcCCCCCCCC--cc------------------chhHHHHHHH--HHHHHHHHHHHHH
Confidence 99998876655443222 122222211110 00 0112233322 1222222233344
Q ss_pred HHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 234 GYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 234 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.......+.+.+.++ .|. .+.+.......++..++++..+++.||+++|+.
T Consensus 231 ~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 231 GFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 455566777888776 465 345666677888899999999999999998753
No 68
>KOG3764|consensus
Probab=99.87 E-value=2.3e-21 Score=174.34 Aligned_cols=234 Identities=19% Similarity=0.115 Sum_probs=200.9
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
.++.+-+++++|++.+.+.+.+.+.+++.|.++||+| ..+.+..+......+.++.+++ ++++.|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 3456668889999999999999999999999999999 6666777777777888888999 99999999999999999
Q ss_pred hhHHHHHhcccCCC-cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCC
Q psy3467 105 PCTHALLAKWIPPT-ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAH 183 (455)
Q Consensus 105 ~~~~~~i~e~~~~~-~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~ 183 (455)
+...++++|.+|++ ||++++|+...+.++|..+||.++|.+.+. .|.+.+|++.+++.++...+-++.++.+..++
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~---~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF---AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh---cCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 99999999999976 589999999999999999999999999999 99999999999999997777766665543332
Q ss_pred CCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchh
Q psy3467 184 PNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSAL 263 (455)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 263 (455)
+. .++..++++++++|.++.........+.....+--.++.+..+.+.-+.-+.|+....
T Consensus 255 ~~--------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp 314 (464)
T KOG3764|consen 255 DS--------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLP 314 (464)
T ss_pred cc--------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecc
Confidence 11 3344567899999999888887777777777777888888888777444499999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q psy3467 264 PYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 264 ~~~~~~~~~~~~g~l~dr~g~r 285 (455)
..+.+.++..+.|.+.||++..
T Consensus 315 ~~~~y~ig~~lfg~la~k~~~~ 336 (464)
T KOG3764|consen 315 ASLSYAIGTNLFGKLADKYPHL 336 (464)
T ss_pred cccchhccCchHHHHHHhcCch
Confidence 9999999999999999999954
No 69
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.87 E-value=2.3e-20 Score=181.49 Aligned_cols=254 Identities=16% Similarity=0.075 Sum_probs=186.1
Q ss_pred HHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHH--h
Q psy3467 12 FVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAA--G 83 (455)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~--~ 83 (455)
++...........+|...++++.++.+.|++.+.+.++..+++++.|+++||+| ......++......... .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 27 FISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 344444455556666677778889999999999999999999999999999999 22222222222221111 2
Q ss_pred hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhh
Q psy3467 84 HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFG 162 (455)
Q Consensus 84 ~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~ 162 (455)
.+++ .+++.|+++|++.+...+...+++.|+.|+++|+++.++.+...++|..+||.+++.+.+. .+||+.|++.+
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~ 183 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGVAWNYGLAA 183 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---HhhHHHHHHHH
Confidence 3455 8889999999998888888999999999999999999999999999999999999999887 79999999877
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
+..++.. +..+.+||++++++..++ +. ++..+.++..+++|.++...+..++... ......+.
T Consensus 184 ~~~~~~~-~~~~~l~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (417)
T PRK10489 184 AGTFITL-LPLLRLPALPPPPQPREH-PL--------------RSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLY 246 (417)
T ss_pred HHHHHHH-HHHHhCCCCCCCCccccc-ch--------------HHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhh
Confidence 7666543 344556665432211100 00 0111234566778777665554444332 34567788
Q ss_pred hHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 243 PTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
|.+.++.+|.++.+.+++.+...++..++.++.+++.||.+++
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~ 289 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG 289 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence 9999988899999999999999999999999999999885544
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=4.7e-20 Score=177.72 Aligned_cols=254 Identities=14% Similarity=0.100 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHH-HHHHhhhhhHHHHhHHh--HH-HHH-HHHHHHHHHHHH
Q psy3467 9 YSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFY-GYVLTQIPFGILAKKYG--IG-MLI-NSVFAFLVPVAA 82 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l-~~~~~~~~~g~l~dr~G--~~-l~~-~~~~~~~~~~~~ 82 (455)
...++.+.......|.++. +.+|+|.|+++.|++.+...+ +..++.++.+. +||+| .. +.. .....+......
T Consensus 22 ~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~ 100 (393)
T PRK15011 22 IVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFA 100 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHH
Confidence 3455555555555565555 478899999999999876655 55555555555 99999 22 222 233334444455
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcc--hhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHH
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTER--SRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFY 159 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~ 159 (455)
+++++ .+++.+.+.|...+...|....+..|+.++++| +...+..+.+.++|..++|.+++.+.++ .|||..|+
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~---~gw~~~f~ 177 (393)
T PRK15011 101 WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG---FSFTVMYL 177 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---cChHHHHH
Confidence 56666 555555444444456788888999998876655 3445788899999999999999999988 89999999
Q ss_pred HhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHH
Q psy3467 160 VFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLM 239 (455)
Q Consensus 160 ~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (455)
+.++..++..+..+.++||.+++++..++ +. +.. ++ +++..+.........+.......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T PRK15011 178 SAAVAFIVCGVMVWLFLPSMRKELPLATG-TL--------------EAP----RR--NRRDTLLLFVICTLMWGTNSLYI 236 (393)
T ss_pred HHHHHHHHHHHHHHhhcCccCCCCccccc-cc--------------ccc----cc--ccccHHHHHHHHHHHHHHHHHHH
Confidence 99888887777777778886543321100 00 000 00 01112222233333444455556
Q ss_pred hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 240 TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 240 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.|.|+++++|+++.+.+.+.+...++..++.++.|++.||+++|+.
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~ 284 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL 284 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 789999988899999999988877778888899999999999999853
No 71
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.87 E-value=3.9e-20 Score=175.44 Aligned_cols=234 Identities=27% Similarity=0.458 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
....+..........+..+...+++|.++++.+++.+.+.++..+++++.|+++||+| ..........+........
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~ 84 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA 84 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh
Confidence 3445556666666667777788888999999999999999999999999999999999 3334444444444445555
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+. .+||+.+++.++
T Consensus 85 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 161 (352)
T cd06174 85 SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES---LGWRWLFLILAI 161 (352)
T ss_pred ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHH
Confidence 667 9999999999999999999999999999999999999999999999999999999999988 789999999888
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhh
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELP 243 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
+.++..+...+. + |.++...+..++..........+.|
T Consensus 162 ~~~~~~~~~~~~-~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (352)
T cd06174 162 LGLLLALLLLFL-L-----------------------------------------RLLLLLALAFFLLSFGYYGLLTYLP 199 (352)
T ss_pred HHHHHHHHHHHH-H-----------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 877755554333 2 4567777777888888888899999
Q ss_pred HHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 244 TFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 244 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.+.++.+|.+..+.+.......++..++.++.+++.||+++|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 200 LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999877999999999999999999999999999999999985
No 72
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.87 E-value=7.2e-20 Score=177.67 Aligned_cols=257 Identities=14% Similarity=0.144 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHhhhhhcccCcccccccch-----hhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH
Q psy3467 8 AYSIFVSRVINTKLTRRVHHKDGSFIWTTAE-----QGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP 79 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~-----~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~ 79 (455)
....++.........+.+|.+.+|+|.+..+ .+++.+++.++..+++++.|+++||+| ..+.......+...
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHH
Confidence 3444555555556667778788888888655 488999999999999999999999999 33333333344444
Q ss_pred HHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhH
Q psy3467 80 VAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIF 158 (455)
Q Consensus 80 ~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f 158 (455)
.....+++ .+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..++|.+++.+.+. .+||+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~ 175 (408)
T PRK09874 100 LMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS---YGLRPVF 175 (408)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHH
Confidence 44555667 89999999999865 5678888999999999999999999999999999999999999887 8999999
Q ss_pred HHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHH-HHHHHHHHHHHHH
Q psy3467 159 YVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAI-LIAHMGQNYGYET 237 (455)
Q Consensus 159 ~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (455)
++.+++.++..+...++.||+++..++.++.+. .+..+.+++++++.. .............
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 176 FITASVLFLCFLVTLFCIRENFQPVSKKEMLHM------------------REVVTSLKNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccccchhhhHH------------------HHHHHhCcCCchHHHHHHHHHHHHHHHHH
Confidence 999888777666667777775432211100000 011334555555432 2223333344444
Q ss_pred HHhhhhHHHHHHhcCcccc----chhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 238 LMTELPTFMKQVLHFNIKE----NGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 238 ~~~~~~~~~~~~~g~s~~~----~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
...+.+.|.++..+ +..+ .+.+.....++..++.+..|++.||+++|+.
T Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~ 290 (408)
T PRK09874 238 IAPILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI 290 (408)
T ss_pred HHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 55677778777433 3222 3455556677788888899999999998865
No 73
>PRK10054 putative transporter; Provisional
Probab=99.87 E-value=1.7e-20 Score=180.65 Aligned_cols=256 Identities=12% Similarity=0.063 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh
Q psy3467 9 YSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~ 84 (455)
...++.........+.++. +++++|+|.++.|++.+.+.++..+++++.|+++||+| ..+.......+......+.
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555543 45689999999999999999999999999999999999 3333333344444455566
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
+++ .+++.|++.|.+.+...+....+..|..|+++|++++++.....++|..++|.+++.+.+ .+||..|++.++
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~----~g~~~~f~~~~~ 169 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM----QSINLPFWLAAI 169 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccCcHHHHHHH
Confidence 667 777889999888777788899999999999999999999999999999999999998875 589999998887
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhh
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELP 243 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
..++..++..+++||+++++++ ++++ ..+.++.+|+|+++...+..++..........+.+
T Consensus 170 ~~~i~~i~~~~~~~~~~~~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 230 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSEKAIAT--ETGS-----------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCIS 230 (395)
T ss_pred HHHHHHHHHHHHHhcccccccc--chhh-----------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHH
Confidence 7777555555556654322110 0000 01125678888888777777766666655556667
Q ss_pred HHHHHH--hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 244 TFMKQV--LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 244 ~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+..+. .+.+....+.............+...|++.||.++|+.
T Consensus 231 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 231 QYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL 276 (395)
T ss_pred HHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH
Confidence 776542 34455566666666666666777888899999887753
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.87 E-value=7.4e-20 Score=180.64 Aligned_cols=250 Identities=16% Similarity=0.191 Sum_probs=181.9
Q ss_pred HHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH-----h---HHHHHHHHHH-HHHHHHHhh---
Q psy3467 17 INTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY-----G---IGMLINSVFA-FLVPVAAGH--- 84 (455)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-----G---~~l~~~~~~~-~~~~~~~~~--- 84 (455)
......+.+|...++.|.|.++++.. +.....+ ++++++|+++||+ | ..+....+.. +.....++.
T Consensus 27 ~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~ 104 (491)
T PRK11010 27 PLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPG 104 (491)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33444455666677788999999987 4444444 6899999999999 8 2233333322 232333332
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh-cccCCCCchhHHHhh
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE-YGFAGGWPSIFYVFG 162 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~-~~~~~~wr~~f~~~~ 162 (455)
++. .+.+.|++.|++.+...+...++..|++|+|||+++.++...+..+|..+++.++..+.+ . .|||..|++.+
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~---~GWr~~f~i~a 181 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY---LGWQGMYWLMA 181 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCHHHHHHHHH
Confidence 345 788899999999999999999999999999999999999999999999999999999988 5 69999999998
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhh
Q psy3467 163 LVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTEL 242 (455)
Q Consensus 163 ~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (455)
++.++..+.. ++.||+++.++. +++.+ ++...++++.++++..+...+..++..........+.
T Consensus 182 ~l~ll~~l~~-~~~~e~~~~~~~-~~~~~--------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~ 245 (491)
T PRK11010 182 ALLIPCIIAT-LLAPEPTDTIPV-PKTLE--------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLT 245 (491)
T ss_pred HHHHHHHHHH-HhcCCCcccccc-ccchh--------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777654443 346775432111 00000 0012245677777777666665566666666667788
Q ss_pred hHHHHHHhcCccccchhhch-hHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 243 PTFMKQVLHFNIKENGTLSA-LPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 243 ~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.++.+++|+|+.+.+.... ...++.+++.+++|++.||+++|+.
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 88887778999999999874 4567899999999999999998753
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.86 E-value=2.8e-19 Score=172.90 Aligned_cols=254 Identities=14% Similarity=0.058 Sum_probs=181.6
Q ss_pred HHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH-----h--H--HHHHHHHHHHHHHHHHhh
Q psy3467 14 SRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY-----G--I--GMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 14 ~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-----G--~--~l~~~~~~~~~~~~~~~~ 84 (455)
.+.......+.+|..-+|.|.|.+++|++..+... .+.++++|+++||+ | . .........+......+.
T Consensus 11 ~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~ 88 (402)
T PRK11902 11 SGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC 88 (402)
T ss_pred HhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 33344555566777777889999999999777775 69999999999999 7 2 222222222222222332
Q ss_pred ---hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHH
Q psy3467 85 ---SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYV 160 (455)
Q Consensus 85 ---~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~ 160 (455)
++. .+.+..++.++..+...+...+++.|+.|+|||+++.++...+..+|..+++.++..+.+.. .|||..|++
T Consensus 89 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~--~gw~~~f~i 166 (402)
T PRK11902 89 PPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV--LGWGNTYLL 166 (402)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc--cCHHHHHHH
Confidence 234 67777778888888888999999999999999999999999999999999999999888740 499999999
Q ss_pred hhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHh
Q psy3467 161 FGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMT 240 (455)
Q Consensus 161 ~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
.+++.++..+ ..++.||+++++++. ++.+ ++...++++++|||.++...+..++..........
T Consensus 167 ~a~~~l~~~l-~~~~~~e~~~~~~~~-~~~~--------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~ 230 (402)
T PRK11902 167 MAGLMLAGAL-TTLWAPEPEVPARPP-RSLG--------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGS 230 (402)
T ss_pred HHHHHHHHHH-HHHhcCCCccccccc-chhH--------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHH
Confidence 8887766444 345667654332211 1100 01122457788999888777666665554443344
Q ss_pred hhhHHHHHHhcCccccchhhchhHH-HHHHHHHHHHHHHHHHhhhccc
Q psy3467 241 ELPTFMKQVLHFNIKENGTLSALPY-LAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 241 ~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.+.++.+++|+++++.+++....+ .+..++.++++++.||+++|+.
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~ 278 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS 278 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 5556676778999999999876654 4688999999999999998753
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=1.9e-19 Score=196.34 Aligned_cols=244 Identities=17% Similarity=0.132 Sum_probs=184.0
Q ss_pred ccCccccccc-chhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHH----HHHHHHHHHHHHHHhhhhH-HHHHHHHHHhh
Q psy3467 27 HKDGSFIWTT-AEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGM----LINSVFAFLVPVAAGHSIL-ALSIIRFIQGL 98 (455)
Q Consensus 27 ~~~~~~~~s~-~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l----~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~ 98 (455)
.+.++.+.+. ...++..+++.+.+.++++++|.++||+| ..+ ....+.......+...+++ .++++|+++|+
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi 120 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGI 120 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444443332 45788899999999999999999999999 211 1222222222223333566 99999999999
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+.+...|+..+++.|++++++|++++++.+.+.++|.++||.+++++.+. .+|++.|...++..++ .++..+++|+
T Consensus 121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~ 196 (1140)
T PRK06814 121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS---GNFVILVALLMGIAVL-GWLASLFIPK 196 (1140)
T ss_pred HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHH-HHHHHhhCCC
Confidence 99999999999999999999999999999999999999999999999998 8999999444444444 4445556666
Q ss_pred CCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccch
Q psy3467 179 EPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENG 258 (455)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 258 (455)
+++.++..+.+.. .. ++....++.+.+++.++...+..+..+........++|.|+++.+|.++.+.|
T Consensus 197 ~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g 264 (1140)
T PRK06814 197 TGNAAPDLKIDRN-II-----------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVAT 264 (1140)
T ss_pred CCCCCCCCeeccc-hH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHH
Confidence 5433221111000 00 00112356778888998888888888777778888999999998999999999
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 259 TLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
++.+...++.+++.++.|++.||..+++
T Consensus 265 ~~~~~~~~g~~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 265 LFLAVFSVGVAVGSFLASKLSEGRITLL 292 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence 9999999999999999999998776654
No 77
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.84 E-value=2.5e-18 Score=153.71 Aligned_cols=245 Identities=15% Similarity=0.159 Sum_probs=201.1
Q ss_pred HHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 16 VINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSILALSII 92 (455)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (455)
...+.+.|.++++++|+|+|.+..|+++++..+...+.+++..+++.|+| .......+.+++..+-...+.+.++.+
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~g 105 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLG 105 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999 333333344444444443333388999
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
-.+.|.|.+......++.+.+.+| |+-+..+++|+....+|..+++.++-.+.++. .+||....+.+.++++..+.+
T Consensus 106 t~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 106 TLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 78899999999999999999999999998872 379999999999888855554
Q ss_pred hhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcC
Q psy3467 173 LLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHF 252 (455)
Q Consensus 173 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 252 (455)
+ |...+++ .++. +.+..+...++|+|.-|.+.+.+.+++..+|....|+|.++.| .|+
T Consensus 183 l---Pq~~r~~---~~~~---------------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~ 240 (395)
T COG2807 183 L---PQALREQ---AASI---------------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGL 240 (395)
T ss_pred h---hhccccc---cccc---------------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCC
Confidence 3 3221111 0000 1222333568999999999999999999999999999999999 699
Q ss_pred ccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 253 NIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 253 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
|+.++|.+.+...+...+..+....+.+|...+
T Consensus 241 sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~ 273 (395)
T COG2807 241 SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ 273 (395)
T ss_pred CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999985544
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=7.3e-19 Score=192.47 Aligned_cols=242 Identities=17% Similarity=0.152 Sum_probs=178.2
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHH---HHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHH
Q psy3467 36 TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLIN---SVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTH 108 (455)
Q Consensus 36 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~---~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~ 108 (455)
....+++.+++.+++.++++++|+++||+| +.+... .+..+...++...+++ .+++.|+++|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 345799999999999999999999999999 222222 2233333344444566 999999999999999999999
Q ss_pred HHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc------CCCCchhHHHhhHHHHHHHHHhhhhcccCCCC
Q psy3467 109 ALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF------AGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEA 182 (455)
Q Consensus 109 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~------~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~ 182 (455)
+++.|++|+++|++++++.+.+..+|.++|+.+++++.+... ..+|++.+.+..+...+..++..+.+||.++.
T Consensus 126 ~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 126 GIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAA 205 (1146)
T ss_pred hhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 999999999999999999999999999999999999876300 02455555444444444344455566776654
Q ss_pred CCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccc-cchhhc
Q psy3467 183 HPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIK-ENGTLS 261 (455)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~ 261 (455)
++...+.++.. ..++....++.+++++.++...+..++.+........++|.++++.+|++.. +.+++.
T Consensus 206 ~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~ 275 (1146)
T PRK08633 206 APEVFDKKKYL----------FPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLL 275 (1146)
T ss_pred Ccccccccccc----------cHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHH
Confidence 32211000000 0001122356678888888777777777777777788899999988999998 899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 262 ALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 262 ~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+...++.+++.++.+++.||+++++.
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~ 301 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGL 301 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccc
Confidence 99999999999999999999988754
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=1.3e-18 Score=167.97 Aligned_cols=256 Identities=13% Similarity=0.100 Sum_probs=174.0
Q ss_pred HHHHHHhhhhhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH---HHHh----
Q psy3467 15 RVINTKLTRRVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP---VAAG---- 83 (455)
Q Consensus 15 ~~~~~~l~~~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~---~~~~---- 83 (455)
........|.++.. .+++|.++++.+++.+++.++..+++++.|+++||+| ..+.......+... ....
T Consensus 15 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (396)
T TIGR00882 15 FFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLL 94 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33333344455443 4568999999999999999999999999999999999 22211111111111 1111
Q ss_pred -hhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh
Q psy3467 84 -HSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF 161 (455)
Q Consensus 84 -~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~ 161 (455)
.+.. ..++.|++.|++.+...+....+..|.. +++++..+......++|..++|.+++.+.+ .+||..|++.
T Consensus 95 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~----~~~~~~f~~~ 168 (396)
T TIGR00882 95 QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS----IDPQIVFWLG 168 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc----cCchHHHHHH
Confidence 1223 4567789999999888888888887754 344567778888889999999999998765 6999999998
Q ss_pred hHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhh
Q psy3467 162 GLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTE 241 (455)
Q Consensus 162 ~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (455)
+.+.++..++.+...||+|++++. ++. .+ + ++++++..+.++++|+|+++...+..+...........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~----~-~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (396)
T TIGR00882 169 SGFALILMLLLMFAKPKAPSSATV-----ANA-LG----A-NASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQ 237 (396)
T ss_pred HHHHHHHHHHHHHhCCCCchhhhh-----hcc-cc----c-ccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 888877555554444443321110 000 00 0 011222345678899998877766666655555556667
Q ss_pred hhHHHHHHh---cCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 242 LPTFMKQVL---HFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 242 ~~~~~~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.|+++.+ +.+..+.|...+...+...++.+..+++.||+++|+.
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 888887754 4455567778888888888999999999999999865
No 80
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=5.5e-18 Score=153.87 Aligned_cols=259 Identities=17% Similarity=0.167 Sum_probs=206.6
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHhh
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAGH 84 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~~ 84 (455)
.++-++++....+.+|++++.++++..|.+++...++.++.+.+++.|.+.+|+| ..+...++++....-++..
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~ 101 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS 101 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4455666666777888899999999999999999999999999999999999999 4444444444444444566
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc--------------
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG-------------- 149 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~-------------- 149 (455)
.++ .++++-|+.|.|.+...+.++.++....++++..+.+++.+...++|..++|.+++.+...+
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 677 99999999999999999999999999999999999999999999999999999999876620
Q ss_pred --cCCCCchhHHHhhHHHHHHHHHhhhh-cccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHH
Q psy3467 150 --FAGGWPSIFYVFGLVGAVWSVAFLLY-CYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILI 226 (455)
Q Consensus 150 --~~~~wr~~f~~~~~~~~~~~i~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (455)
....||++|...+....+..+..... .|+.++..++ +. +++.....+++|+|+++.-.+
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~---~~---------------~~~~~~~~~l~~~~~~~~gvl 243 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPS---LG---------------ASGSAGLSSLFQNKHLRLGVL 243 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccc---cc---------------ccccchHHHHHhChHHHHHHH
Confidence 01248888888777666544433221 1222111110 00 111114589999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 227 AHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..+++-.......++++.|+.+..|.+..++....+.+..+..+|++++.++.+|+..+|.
T Consensus 244 ~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~ 304 (422)
T COG0738 244 AIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY 304 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 9999999999999999999999778999999999999999999999999999999988754
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.82 E-value=9.8e-19 Score=170.21 Aligned_cols=262 Identities=13% Similarity=0.111 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHhhhhhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH---HH
Q psy3467 9 YSIFVSRVINTKLTRRVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP---VA 81 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~---~~ 81 (455)
...++.........+.++.. .+++|+|..+.|++.+++.++..+++++.|+++||+| ..+....+...... ..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444555444 4569999999999999999999999999999999999 22221122111111 11
Q ss_pred Hhhh-----hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCc
Q psy3467 82 AGHS-----IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWP 155 (455)
Q Consensus 82 ~~~~-----~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr 155 (455)
...+ .. ...+.+++.|.+.....+....+..| . .++|++.++......++|..++|.+++.+.+ .+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~~ 170 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN----INPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh----cCch
Confidence 1111 11 22334444454444434444343322 2 3567888899999999999999999998876 5899
Q ss_pred hhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHH
Q psy3467 156 SIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGY 235 (455)
Q Consensus 156 ~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (455)
+.|++.+++.++..++.++..+|++++++..+++++ ++++.+..+.++.+|+|+++.+.+..+......
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~ 239 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-----------NASAVSLKDALALLKLPKFWFLVLYVIGVACFY 239 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-----------ccccccHHHHHHHccCCCeEeehHHHHHHHHHH
Confidence 999998887777555555544443322111000000 000111223456788888766655554544444
Q ss_pred HHHHhhhhHHHHHHh---cCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 236 ETLMTELPTFMKQVL---HFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 236 ~~~~~~~~~~~~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.....+.|.++.+.+ +.+..+.+.+.+...++..++.++.|++.||+++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 240 DVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA 294 (420)
T ss_pred HHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 445556777766543 4555677888888889999999999999999999865
No 82
>KOG0254|consensus
Probab=99.81 E-value=9.9e-19 Score=173.99 Aligned_cols=262 Identities=16% Similarity=0.188 Sum_probs=190.0
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHh
Q psy3467 37 AEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLA 112 (455)
Q Consensus 37 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~ 112 (455)
.+.+|+.+.+.++..+++++.|+++|++| ..++......++....+.+++. +++++|+++|+|.|......+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 35599999999999999999999999999 6666666777777888888888 9999999999999999999999999
Q ss_pred cccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCC-ChhHH
Q psy3467 113 KWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNI-AEDER 191 (455)
Q Consensus 113 e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~-~~~~~ 191 (455)
|..|++.||...+..+....+|..++..++....+. . .+||..+.+..+++++..+. .+++||+|++.-+. +.++.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 999999999999999999999999996666655432 1 38999999988888886666 89999999753221 11111
Q ss_pred HHHhhhccc--cc----------------CCCCCCCCChhhhhc----ChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 192 KYIMSSVWG--LA----------------GVASSPPVPWKDIVS----SLPFWAILIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 192 ~~~~~~~~~--~~----------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
+...+.... ++ ....+.+..++++++ ++.+....+..+.+..+......|.+.+++.
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 111111110 00 000111112344443 2334556666677777777778888988887
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHHH
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEKFSHTSTRKIINAFLYQVLSFGMIVSS 313 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (455)
.|.+... .......++...++..++..+.||+|||+. ...+.....++.++++
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l----------ll~s~~~m~~~~~~~~ 377 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL----------LLFGAAGMSICLVILA 377 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHhHHHHHHHHHHHH
Confidence 4665433 444556778888888899999999999865 5555555555555544
No 83
>KOG2504|consensus
Probab=99.81 E-value=2.2e-18 Score=168.21 Aligned_cols=269 Identities=17% Similarity=0.182 Sum_probs=212.3
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
+.....+........+.++++++.+.++++|+.++......+..++.+.+.||+| +.+.+..+...+..++.++++.
T Consensus 55 ~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i 134 (509)
T KOG2504|consen 55 NLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSL 134 (509)
T ss_pred HHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3333333444556677888999999999999999999999999999999999999 7777777778888888888887
Q ss_pred --HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH
Q psy3467 88 --ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 88 --~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
.++..-++.|+|.+..+.....++..+++ |+|+.+.|+...+..+|..+-|.+...+.+. .|||+.+++.+.+.
T Consensus 135 ~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~---~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 135 WQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSK---YGWRGALLIFGGIS 210 (509)
T ss_pred HHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHH---hCcHHHHHHHHHHH
Confidence 66667899999999999999999998884 9999999999999999999999999999998 99999999999988
Q ss_pred HHHHHHhhhhcccCCCCCCCCChhHHH----------------H-------Hh-------hhcccccCCC--CCCCCCh-
Q psy3467 166 AVWSVAFLLYCYEEPEAHPNIAEDERK----------------Y-------IM-------SSVWGLAGVA--SSPPVPW- 212 (455)
Q Consensus 166 ~~~~i~~~~~~~e~~~~~~~~~~~~~~----------------~-------~~-------~~~~~~~~~~--~~~~~~~- 212 (455)
+-..+......|.+++.++. .+++.+ . .. ...+.+++.. ..+....
T Consensus 211 l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (509)
T KOG2504|consen 211 LNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSM 289 (509)
T ss_pred HHHHHHHHHcCCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhh
Confidence 77666666666644333211 000000 0 00 0000000000 1111111
Q ss_pred --hhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 213 --KDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
.+++|+|.++.+.+...+...++.....++|.+.++ .+++..+.+.+.+..++..+++.+..|++.|+...+
T Consensus 290 ~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~ 363 (509)
T KOG2504|consen 290 LDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR 363 (509)
T ss_pred hhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc
Confidence 578999999999999999999999999999999996 899999999999999999999999999999998854
No 84
>KOG2532|consensus
Probab=99.80 E-value=1.2e-20 Score=181.64 Aligned_cols=182 Identities=25% Similarity=0.437 Sum_probs=131.3
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc----------------------------------------
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK---------------------------------------- 287 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~---------------------------------------- 287 (455)
+++++|+.|.+++.+.+.+|++++++++|++.||+|.|++
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 3588999999999999999999999999999999999986
Q ss_pred ----------ccccchHHHHHHHHHHHHHHHHHHHHH--------HHHHHhhHHhcCCCCceEEEEEecCcccccccCCC
Q psy3467 288 ----------FSHTSTRKIINAFLYQVLSFGMIVSSA--------LMIWKGLMVLTGSESPIVVVLREDGSVKFLTKGDN 349 (455)
Q Consensus 288 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 349 (455)
+.+..||.....+...+...|.++... ..+|...||+.+..+.+|..+| .....+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w------~~~~~d~ 219 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILW------FLFYSDS 219 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHH------HHHhcCC
Confidence 333556666555544444333332221 1469999999999999997777 2222222
Q ss_pred CCccccccccCCCcccccccccccccccccceeeEEEEeccCCCCCCCCCcHHHHHhhHHHHHHHHHHhcchhhHHHHHh
Q psy3467 350 NSVDDRGLYAPGQLWLTKNDVVGRARGFLPYVGMVTIYMNEYPKFKSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMT 429 (455)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (455)
+.++...-.+|..++..+. .+...+++.++||+++++++++|++.+++|+++|.++++++
T Consensus 220 -P~~h~~is~~El~~I~~~k-------------------~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~ 279 (466)
T KOG2532|consen 220 -PSKHPNISEKELKYIEKGK-------------------SEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT 279 (466)
T ss_pred -cccCCCCCHHHHHHHHhcc-------------------cccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111111100 01111122589999999999999999999999999999999
Q ss_pred hhhHHHHHhhccccccceeeecccCC
Q psy3467 430 ELPTFMKQVLHFNIKEHGSVRVTSSL 455 (455)
Q Consensus 430 w~P~y~~~~~~~~~~~~g~~~~~p~~ 455 (455)
|+|+||+|++|+|++++|+++++|++
T Consensus 280 y~PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 280 YLPTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred HhhHHHHHHhCCChhhhhHHHHHHHH
Confidence 99999999999999999999999974
No 85
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.79 E-value=1.8e-17 Score=160.68 Aligned_cols=240 Identities=15% Similarity=0.079 Sum_probs=162.5
Q ss_pred hhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 22 TRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
++..+.+.+++|++.++.|++.+++.++..++++++|.++||+| .......+..+......+.+++ .+.+.|++.
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34444556789999999999999999999999999999999996 2233333333444445555666 888999999
Q ss_pred hhcccCchhhHHHHHh--------cccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHH
Q psy3467 97 GLGEGPIVPCTHALLA--------KWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVW 168 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~--------e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~ 168 (455)
|++.+...+...+... |......|.+..| .+|..++|.+++.+... .+|+. |++.++..++.
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~---~~~~~-f~~~~~~~~~~ 172 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE---LSNIQ-LYITAGSSALL 172 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc---chhHH-HHHHHHHHHHH
Confidence 9988777776665532 2233334555554 46888889988877332 34553 55555555554
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
.+ ..+++||+|+.+++.+++.+ +....+.++++|+|+++.+.+..++..........+.+.+.++
T Consensus 173 ~~-~~~~~~e~~~~~~~~~~~~~--------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (418)
T TIGR00889 173 GV-FALTLPDIPVAKSTAKMSIK--------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE 237 (418)
T ss_pred HH-HHhcCCCCCCCccccccCHH--------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 44 35577887543221111100 0111233567888888777777777666555666777888876
Q ss_pred HhcCcc--------ccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 249 VLHFNI--------KENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 249 ~~g~s~--------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.|.++ .+.+...+...+..+++.++.+++.||+|+|+.
T Consensus 238 -~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~ 283 (418)
T TIGR00889 238 -FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV 283 (418)
T ss_pred -hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 56554 455888888889999999999999999999865
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.79 E-value=4.8e-17 Score=160.01 Aligned_cols=274 Identities=15% Similarity=0.106 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHhhhhhc-ccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh---HHHHHHHHHHHHHHHHH
Q psy3467 8 AYSIFVSRVINTKLTRRVH-HKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G---~~l~~~~~~~~~~~~~~ 82 (455)
.+..+..+.......+.++ -+++++|.++++.+++.+.+.....+..+++|+++|| +| ..+.+..+..++...+.
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 3444444444433333332 2356799999999999999999999999999999999 99 55555556666666666
Q ss_pred hhhhH--HHHHHHHHHhhcccCchhhHHHHHhcccCCC--cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhH
Q psy3467 83 GHSIL--ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT--ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIF 158 (455)
Q Consensus 83 ~~~~~--~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f 158 (455)
.+.+. .+.++|.++|+|.|...|...++++|.+|++ +|++++++++.+.++|..+||.+++++.++ .|||+.|
T Consensus 100 ~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~---~gw~~~F 176 (489)
T PRK10207 100 MSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK---FGYSVTY 176 (489)
T ss_pred HhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh---hChHHHH
Confidence 55543 4568999999999999999999999999877 457899999999999999999999999998 8999999
Q ss_pred HHhhHHHHHHHHHhhhhcccCCCCC---C-CCChhHHHHHh------------hhcccccCC-----------------C
Q psy3467 159 YVFGLVGAVWSVAFLLYCYEEPEAH---P-NIAEDERKYIM------------SSVWGLAGV-----------------A 205 (455)
Q Consensus 159 ~~~~~~~~~~~i~~~~~~~e~~~~~---~-~~~~~~~~~~~------------~~~~~~~~~-----------------~ 205 (455)
++.++ +.+..++.+.+.++..++. + ..+.+.+.... ....+.... .
T Consensus 177 ~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~ 255 (489)
T PRK10207 177 NLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFR 255 (489)
T ss_pred HHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 98654 3333444444444322111 1 11111111000 000000000 0
Q ss_pred CCCCCChhhhhcChhHHHHHH--HHHHHHHHHHHHHhhhhHHHHHHhcCccc----cchhhchhHHHHHHHHHHHHHHHH
Q psy3467 206 SSPPVPWKDIVSSLPFWAILI--AHMGQNYGYETLMTELPTFMKQVLHFNIK----ENGTLSALPYLAMWIFSMFASFIA 279 (455)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~g~~~~~~~~~~~~~~~~~g~l~ 279 (455)
++.+. .+.+|+|.+....+ ...+.+..+.......+.+.++..+.+.. ....+.+...+...+..++.+++.
T Consensus 256 ~~~~~--~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~ 333 (489)
T PRK10207 256 EAFKL--DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIY 333 (489)
T ss_pred HHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHH
Confidence 00001 14556655444332 24445555556667778888753333210 112233334456667778889999
Q ss_pred HHhhhccc
Q psy3467 280 DSMITSEK 287 (455)
Q Consensus 280 dr~g~r~~ 287 (455)
||+++|+.
T Consensus 334 ~rl~~r~~ 341 (489)
T PRK10207 334 THLGSKGK 341 (489)
T ss_pred HHHhhCCC
Confidence 99998863
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.79 E-value=6.9e-17 Score=158.82 Aligned_cols=300 Identities=11% Similarity=0.014 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhhhhhccc-Ccc--cccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh---HHHHHHHHHHHHHH
Q psy3467 7 TAYSIFVSRVINTKLTRRVHHK-DGS--FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG---IGMLINSVFAFLVP 79 (455)
Q Consensus 7 ~~~~~~~~~~~~~~l~~~~~~~-~~~--~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G---~~l~~~~~~~~~~~ 79 (455)
..+..+..+.....+.+.++.. .++ +|++..+.+++.+.+.++..++++++|+++|| +| ..+.+..+..+...
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 3444455555544445555544 334 89999999999999999999999999999999 79 44444444444444
Q ss_pred HHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCc---chhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCc
Q psy3467 80 VAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTE---RSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWP 155 (455)
Q Consensus 80 ~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr 155 (455)
....+++. .+.+.|++.|+|.|...+...++++|++|+++ |+++.++++.+.++|..+||.+++.+.++ .|||
T Consensus 95 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~---~g~~ 171 (475)
T TIGR00924 95 MLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN---YGYH 171 (475)
T ss_pred HHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh---cChH
Confidence 55555556 78889999999999999999999999998764 88899999999999999999999999887 8999
Q ss_pred hhHHHhhHHHHHHHHHhhhhccc----CCCCCCCCChhHHHHHhhh----------------cccc--------------
Q psy3467 156 SIFYVFGLVGAVWSVAFLLYCYE----EPEAHPNIAEDERKYIMSS----------------VWGL-------------- 201 (455)
Q Consensus 156 ~~f~~~~~~~~~~~i~~~~~~~e----~~~~~~~~~~~~~~~~~~~----------------~~~~-------------- 201 (455)
+.|.+.++..++. ++.+.+.++ .|++++..++++++..... ..+.
T Consensus 172 ~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (475)
T TIGR00924 172 VGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAV 250 (475)
T ss_pred HHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 9999877655443 333333332 2211111111111110000 0000
Q ss_pred ----cCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccc----chhhchhHHHHHHHHHH
Q psy3467 202 ----AGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKE----NGTLSALPYLAMWIFSM 273 (455)
Q Consensus 202 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~g~~~~~~~~~~~~~~~ 273 (455)
.++..++..+..+-.|...+..+.+...+.+..+....+.++.+.++..+.+... .+.+.+...+..++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p 330 (475)
T TIGR00924 251 IIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSP 330 (475)
T ss_pred HHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHH
Confidence 0000011111111122234455556666667777777777888877754444222 56777777777777777
Q ss_pred HHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHHH
Q psy3467 274 FASFIADSMITSEKFSHTSTRKIINAFLYQVLSFGMIVSS 313 (455)
Q Consensus 274 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (455)
+..++..|+.||.... ....+ ...++.+.+.+....+
T Consensus 331 ~~~~~~~~l~~~~~~~-~~~~k--~~~G~~l~~~~~~~~~ 367 (475)
T TIGR00924 331 VLAMIWTRLGRKGKDP-TTPLK--FTLGMLFCGASFLTFA 367 (475)
T ss_pred HHHHHHHHHHhCCCCC-CcHHH--HHHHHHHHHHHHHHHH
Confidence 7666666676652211 11111 3455555555555443
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.79 E-value=8.1e-17 Score=157.52 Aligned_cols=258 Identities=14% Similarity=0.145 Sum_probs=188.5
Q ss_pred hhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 22 TRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
...++.+.+|+|- ....+|+.+.+.++.+++.++.|+++|.|| ..+....+..++...++.+++. .++++..+.|
T Consensus 64 a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 4445667778875 468899999999999999999999999999 7777777888888889999999 9999999999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
+|.|... .....++|..|.|.|....++......+....++.++..+..+ .+|||.|++..+...+..++.+++..
T Consensus 143 vgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~---~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 143 VGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH---SGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred HhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC---CCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 9977655 4566799999999999888888777666667788888877766 79999999998887776665554443
Q ss_pred cCCCCC-CCCChhHHHHHhhh---------------------------cccc--------------------cC--CCCC
Q psy3467 178 EEPEAH-PNIAEDERKYIMSS---------------------------VWGL--------------------AG--VASS 207 (455)
Q Consensus 178 e~~~~~-~~~~~~~~~~~~~~---------------------------~~~~--------------------~~--~~~~ 207 (455)
.+++.+ +..+..+++...+- ..++ |. ..++
T Consensus 219 PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~ 298 (599)
T PF06609_consen 219 PPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKD 298 (599)
T ss_pred CCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCC
Confidence 322211 11111111111110 0000 00 1134
Q ss_pred CCCChhhhhcC-hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccc---cchhhchhHHHHHHHHHHHHHHHHHHhh
Q psy3467 208 PPVPWKDIVSS-LPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIK---ENGTLSALPYLAMWIFSMFASFIADSMI 283 (455)
Q Consensus 208 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~g~~~~~~~~~~~~~~~~~g~l~dr~g 283 (455)
+..| .+++|+ |.+....++.++....++....+.|......++-++. +.++.......+..++.++.|.+..+++
T Consensus 299 Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 299 PLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred CcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 4556 678887 4566656677777777888888888888877777653 5677888888888999999999998886
Q ss_pred hc
Q psy3467 284 TS 285 (455)
Q Consensus 284 ~r 285 (455)
|-
T Consensus 378 ~~ 379 (599)
T PF06609_consen 378 HI 379 (599)
T ss_pred ch
Confidence 54
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.78 E-value=4.2e-17 Score=153.38 Aligned_cols=260 Identities=15% Similarity=0.100 Sum_probs=177.0
Q ss_pred HHHhhhhhcccCcccccccch-hhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHH
Q psy3467 18 NTKLTRRVHHKDGSFIWTTAE-QGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSII 92 (455)
Q Consensus 18 ~~~l~~~~~~~~~~~~~s~~~-~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 92 (455)
.+.++-..|.+.+|+|+|+++ .|.+.+++..++++.+++.|.++||+| +.........+...+..++++. .+.+.
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555667788899999999 999999999999999999999999999 4444444555555556666677 99999
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh--hHHHHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF--GLVGAVWSV 170 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~--~~~~~~~~i 170 (455)
|++.|++.|... +...++..|+|++||+++.++...+..+|.++++++++.+ .. .|||+.+... ...+.....
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s---~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VT---LGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---cCchhHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999994 44 7999866543 223334455
Q ss_pred HhhhhcccCCCC---CCCCChhHH--HHHhhhcccccCCCCC-C-----------CCChhhhhcChhHHHHHHHHHHHHH
Q psy3467 171 AFLLYCYEEPEA---HPNIAEDER--KYIMSSVWGLAGVASS-P-----------PVPWKDIVSSLPFWAILIAHMGQNY 233 (455)
Q Consensus 171 ~~~~~~~e~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
++.+++|..++. ++..+.++. ...++...+...+..+ . ...+++..+||.++...+-+.+...
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 556677743331 111000000 0000000000000000 0 1122344677777766666777777
Q ss_pred HHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHh
Q psy3467 234 GYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSM 282 (455)
Q Consensus 234 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 282 (455)
+++.+.+|.....++.-+-.+.-+|.+-.+..+.+++..+..|++-.++
T Consensus 277 g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 277 GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 7777777777666653221222556666666667777778888875444
No 90
>KOG0253|consensus
Probab=99.78 E-value=6.1e-17 Score=144.30 Aligned_cols=341 Identities=13% Similarity=0.175 Sum_probs=213.0
Q ss_pred hhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHH-HHHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 22 TRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSV-FAFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 22 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~-~~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
.-..|.....+|.+..+.+++......+..+++..+|.++|++| .....+.+ -.+...+...++++ .+++.|.+.|
T Consensus 98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~ 177 (528)
T KOG0253|consen 98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWG 177 (528)
T ss_pred HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHh
Confidence 33445566778899999999999999999999999999999999 33333332 23344456677888 9999999999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
+|.|+ .|...++-.|..|..+|..-+-.. ..+.+|.+....++...... .||||.......+..+ +....+++|
T Consensus 178 ~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~---~gwr~~l~~~~~pl~~-~a~f~~w~~ 251 (528)
T KOG0253|consen 178 FGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN---FGWRYLLFTSSTPLMF-AARFLVWVY 251 (528)
T ss_pred ccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHhHHHH-HHHHHhhcc
Confidence 99998 899999999999999999888777 99999999999999998888 8999998888765555 556677889
Q ss_pred cCCCCCCCCChhHHHH--Hhhhcc--------------------ccc--------CCCCCCCCChhhhhc---ChhHHHH
Q psy3467 178 EEPEAHPNIAEDERKY--IMSSVW--------------------GLA--------GVASSPPVPWKDIVS---SLPFWAI 224 (455)
Q Consensus 178 e~~~~~~~~~~~~~~~--~~~~~~--------------------~~~--------~~~~~~~~~~~~~~~---~~~~~~~ 224 (455)
|+|+..-...+++++. +++..+ +++ ...++...+..+++. ++....+
T Consensus 252 ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlll 331 (528)
T KOG0253|consen 252 ESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLL 331 (528)
T ss_pred cCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHH
Confidence 9998643222222211 111000 000 011122233334432 1234445
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHH--hc-----------------CccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 225 LIAHMGQNYGYETLMTELPTFMKQV--LH-----------------FNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g-----------------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
...++...+.+++.........+.. .+ .+....-.=..+..+....|.++.+++.||+|||
T Consensus 332 w~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK 411 (528)
T KOG0253|consen 332 WRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK 411 (528)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch
Confidence 5555666666666554444444331 01 1111111112345677889999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHH------HHHH--hhHHhcCCCCceEEEEEecCcccccccCCCCCcccccc
Q psy3467 286 EKFSHTSTRKIINAFLYQVLSFGMIVSSAL------MIWK--GLMVLTGSESPIVVVLREDGSVKFLTKGDNNSVDDRGL 357 (455)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 357 (455)
+. +...++...+..+.+... ..|. +-+++.+.+..+. ...-+.
T Consensus 412 kT----------Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaY-------------------vYtPEV 462 (528)
T KOG0253|consen 412 KT----------MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAY-------------------VYTPEV 462 (528)
T ss_pred hH----------HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEE-------------------EecCcc
Confidence 76 444444443333322111 0111 1112222222111 111123
Q ss_pred ccCCCcccccccccccccccccceeeEEEEeccCCCCCCCCCcHH
Q psy3467 358 YAPGQLWLTKNDVVGRARGFLPYVGMVTIYMNEYPKFKSPPVPWK 402 (455)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~ 402 (455)
|++ -.+...+|.+++..+++++++|.+.- ..+.+...|..
T Consensus 463 yPT----avRatgvGtcSsmaRIggI~~p~iA~-~~e~s~sl~i~ 502 (528)
T KOG0253|consen 463 YPT----AVRATGVGTCSSMARIGGIFSPVIAM-RAELSTSLPIF 502 (528)
T ss_pred cch----hhhhcchhhhhhHHhhhhhhhhHHHH-HhccceeehHH
Confidence 333 35667888999999999999998873 22344455654
No 91
>KOG0255|consensus
Probab=99.77 E-value=7.7e-17 Score=161.28 Aligned_cols=263 Identities=14% Similarity=0.142 Sum_probs=180.5
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchh
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVP 105 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~ 105 (455)
+..+.+.....+..+++++|..+|++++|+++||+| +.+....+..++....++++++ .+++.|+++|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 456667888899999999999999999999999999 6777777777778888899999 999999999999999999
Q ss_pred hHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCC
Q psy3467 106 CTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPN 185 (455)
Q Consensus 106 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~ 185 (455)
....++.|++++|+|+.+..+ ......+..+++..++++. .+||+.+++..+++.+..+. +++.||+|++...
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~-----~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT-----RDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999 6666666667777766664 48999999999998874444 6667799975322
Q ss_pred CCh-hHHHHHhhhc-c-----cc--------------cCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhH
Q psy3467 186 IAE-DERKYIMSSV-W-----GL--------------AGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPT 244 (455)
Q Consensus 186 ~~~-~~~~~~~~~~-~-----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (455)
..+ ++..+..++. + .. .....+++..+.++++.|++....+...+.++.......-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 211 1111111110 0 00 0011123355788888886655555555544433333333333
Q ss_pred HHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHHH
Q psy3467 245 FMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEKFSHTSTRKIINAFLYQVLSFGMIVSS 313 (455)
Q Consensus 245 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (455)
...+ +|.+.... ....+.....+....+...||.|||.. ...+.....++.++..
T Consensus 344 ~~~~-lg~~~~~~---~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~~~~~~~~~ 398 (521)
T KOG0255|consen 344 NVSG-LGGNIYLN---FTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLAGIGLLLFG 398 (521)
T ss_pred hhhh-cCchHHHH---HHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHH
Confidence 3333 45444332 333344666777777899999988754 4444444444444443
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.77 E-value=9.9e-18 Score=164.22 Aligned_cols=244 Identities=15% Similarity=0.098 Sum_probs=174.2
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh----HHHHHHHHHHHHHHHHHhhh------hH-HHHHH
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG----IGMLINSVFAFLVPVAAGHS------IL-ALSII 92 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G----~~l~~~~~~~~~~~~~~~~~------~~-~~~~~ 92 (455)
+.+++|+++.++|++.++..+..++.+++.|.++|| +| ..+.......+........+ .. .+++.
T Consensus 26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (437)
T TIGR00792 26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYIT 105 (437)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 456789999999999999999999999999999998 45 22233233333333222222 13 66778
Q ss_pred HHHHhhcccCchhhHHHHHhccc-CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc----ccCCCCchhHHHhhHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWI-PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY----GFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~----~~~~~wr~~f~~~~~~~~~ 167 (455)
+++.+++.+...+...++..|.. ++|||++..++.+.+..+|..+++.+.+.+... ....+||+.+.+.++++++
T Consensus 106 ~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~ 185 (437)
T TIGR00792 106 YILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVV 185 (437)
T ss_pred HHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHH
Confidence 88889888877777888889988 468999999999999999888877766555431 0125899999999988888
Q ss_pred HHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMK 247 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (455)
..++.++..||++++++.. ++ ++.+..+.+++++++|.++...+..++............+.+.+
T Consensus 186 ~~~~~~~~~~e~~~~~~~~---~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T TIGR00792 186 SLIICFFGTKERYSEIPKN---IE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFT 250 (437)
T ss_pred HHHHHHcCCEecCCCCCcc---cc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEe
Confidence 7777777778765321110 00 00111234567889999988887777777776666556666665
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..++ ++.+.+.+.....++.+++.++.+++.||+|+|+.
T Consensus 251 ~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~ 289 (437)
T TIGR00792 251 YVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL 289 (437)
T ss_pred eecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 5444 45566677777788899999999999999998854
No 93
>KOG2615|consensus
Probab=99.77 E-value=3e-17 Score=147.21 Aligned_cols=246 Identities=14% Similarity=0.098 Sum_probs=158.3
Q ss_pred cccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHH
Q psy3467 34 WTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHA 109 (455)
Q Consensus 34 ~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~ 109 (455)
.+..-.|.+.|.|+++..+.++.+|.++||+| +.+++.....+....-+.++++ .+++.|++.|+..| ...+..+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence 45567899999999999999999999999999 4444444444455566677788 77777999999987 6688899
Q ss_pred HHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH----HHHHHHhhhhcccCCCCCCC
Q psy3467 110 LLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG----AVWSVAFLLYCYEEPEAHPN 185 (455)
Q Consensus 110 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~----~~~~i~~~~~~~e~~~~~~~ 185 (455)
+++|.+++|+|++.++.....+++|.++||++++++.+.....| +..|.....+. ..-.....+++||+-+.+++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999999999999999999999999999999999987210022 33333322222 22133456788998544333
Q ss_pred CChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHH-------HHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccch
Q psy3467 186 IAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFW-------AILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENG 258 (455)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 258 (455)
.++ .....+....+.+..+.....-...+||++.. ...+..+.+...+.....+.+.+..+.+|+++.|.|
T Consensus 223 ~~~--~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 223 NDE--HSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred ccc--ccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 311 11011100000000000011112234444322 222333333333444444455554567999999999
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHhh
Q psy3467 259 TLSALPYLAMWIFSMFASFIADSMI 283 (455)
Q Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g 283 (455)
.+.+..++...+.+.......||.+
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccc
Confidence 9999988888888877777777665
No 94
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.76 E-value=2.3e-16 Score=152.10 Aligned_cols=254 Identities=9% Similarity=-0.066 Sum_probs=180.4
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHH--HHHHHHHHHHhhhhhHH-HHhHHh--HH-HHHH-HHHH-HHHHHH-
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYV--LSSFFYGYVLTQIPFGI-LAKKYG--IG-MLIN-SVFA-FLVPVA- 81 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~--~s~~~l~~~~~~~~~g~-l~dr~G--~~-l~~~-~~~~-~~~~~~- 81 (455)
.+..+.......|.+|...+|.|.|.+++|+. .++..+...+.+++++. .+||+| .. ++.. .... ......
T Consensus 10 y~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~ 89 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLAL 89 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHc
Confidence 34444445667788888888999999999997 46677788788888844 688888 22 1111 1111 111111
Q ss_pred -Hhhhh-H-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhH
Q psy3467 82 -AGHSI-L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIF 158 (455)
Q Consensus 82 -~~~~~-~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f 158 (455)
....+ . .++..-++.++..+...+...++..|..++|+++...+....+..+|..+|+...+.+.++ .|||..|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---~gw~~~f 166 (390)
T TIGR02718 90 VGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---FGQRPAF 166 (390)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHH
Confidence 11222 2 4455556666667777788888888988888889888889888899999999999898888 8999999
Q ss_pred HHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHH
Q psy3467 159 YVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETL 238 (455)
Q Consensus 159 ~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (455)
++.+.+.++..+..++..||++++++. + +++..+.++.+|+|.++......++........
T Consensus 167 ~~~a~l~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 227 (390)
T TIGR02718 167 LLVACVPLASLVCVLWLKDRAVASPEA----P---------------LARRASLFRFFRRPLAWSLLALALLSAMTAVSG 227 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCcccc----c---------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH
Confidence 999988877555554444443221110 0 001123578888888887777777777777777
Q ss_pred HhhhhHHHHHHhcCccccchhhchhHHH-HHHHHHHHHHHHHHHhhhccc
Q psy3467 239 MTELPTFMKQVLHFNIKENGTLSALPYL-AMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 239 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..+.+.|++| .|+++++.|........ ...++.++.|++.||+++|+.
T Consensus 228 ~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 276 (390)
T TIGR02718 228 FGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT 276 (390)
T ss_pred HHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 8888999988 79999999998887764 566778899999999998854
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.75 E-value=3.9e-21 Score=189.08 Aligned_cols=248 Identities=17% Similarity=0.262 Sum_probs=170.0
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhh---hH-HHHHHHHHHhhcccCchhhHH
Q psy3467 36 TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHS---IL-ALSIIRFIQGLGEGPIVPCTH 108 (455)
Q Consensus 36 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~---~~-~~~~~r~l~G~~~~~~~~~~~ 108 (455)
+.+.++..+...+|..+|+++.|.++||+| ..+....+..++..+..+++ ++ .+.++|+++|++.|...+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 346789999999999999999999999999 44555555556666666777 77 999999999999999999999
Q ss_pred HHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCCh
Q psy3467 109 ALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAE 188 (455)
Q Consensus 109 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~ 188 (455)
.++.|..|+|+|++..++.+.+..+|..++..++..+....++.+||..+.+.++++++ .++..+++||+|++--.+++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~-~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLL-VLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccceeccccc
Confidence 99999999999999999999999999999998887665441114599999999888877 45566889999986422221
Q ss_pred hHH-HHHhhhcc-------cccC------CCCCCCCChhhhhcChh----HHHHHHHH-HHHHHHHHHHHhhhhHHHHHH
Q psy3467 189 DER-KYIMSSVW-------GLAG------VASSPPVPWKDIVSSLP----FWAILIAH-MGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 189 ~~~-~~~~~~~~-------~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 249 (455)
+++ ++..++.+ +.++ +.++.+.+++++++++. +....... +....+......+.+...++
T Consensus 204 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~- 282 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN- 282 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-
Confidence 111 11111100 0000 00111134666776643 22222222 22233334445566666655
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+.+.. -.......+...++.+.+..+.||+|||+.
T Consensus 283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~ 318 (451)
T PF00083_consen 283 AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL 318 (451)
T ss_pred cccccc--cccccccccccccccccccccccccccccc
Confidence 566665 222334456666777788899999999976
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=1.9e-15 Score=148.89 Aligned_cols=260 Identities=11% Similarity=0.065 Sum_probs=184.1
Q ss_pred HhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh------hhH-HH
Q psy3467 20 KLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH------SIL-AL 89 (455)
Q Consensus 20 ~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~------~~~-~~ 89 (455)
.++...+++++++|+|.++.+++.++. .....++++.|+++||+| +.+++.....++....+.+ .+. .+
T Consensus 45 ~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 344455667889999999999998874 455677888999999999 4445555555555555544 356 89
Q ss_pred HHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHH
Q psy3467 90 SIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 90 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~ 169 (455)
.+.|+++|+|.+...+.+...+.+++| ++||++.++...+.++|.++.+.+...+.. .+|+..|++.+++.++..
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~----~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS----DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHH
Confidence 999999999999889999999999996 889999999999999999764444444433 368899999999988888
Q ss_pred HHhhhhcccCCCCC-----CCCChhHHHHH-------------------------------------hh-----------
Q psy3467 170 VAFLLYCYEEPEAH-----PNIAEDERKYI-------------------------------------MS----------- 196 (455)
Q Consensus 170 i~~~~~~~e~~~~~-----~~~~~~~~~~~-------------------------------------~~----------- 196 (455)
++...++++.|... ++.++++++.. ++
T Consensus 199 ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~ 278 (591)
T PTZ00207 199 ILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVG 278 (591)
T ss_pred HHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 88888777665321 11122222200 00
Q ss_pred ----hc------c-------------cc-c---------------------------C-CCCCCCCChhhhhcChhHHHH
Q psy3467 197 ----SV------W-------------GL-A---------------------------G-VASSPPVPWKDIVSSLPFWAI 224 (455)
Q Consensus 197 ----~~------~-------------~~-~---------------------------~-~~~~~~~~~~~~~~~~~~~~~ 224 (455)
.. . ++ + + ..++..+++.+.+++..+|.+
T Consensus 279 ~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll 358 (591)
T PTZ00207 279 FAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCL 358 (591)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHH
Confidence 00 0 00 0 0 000111266777888899999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHh-cCcccc--chhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 225 LIAHMGQNYGYETLMTELPTFMKQVL-HFNIKE--NGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~--~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
...+++...........+.++.+. + |.+..+ ...+.+..++.+.+|.+..|.+.....+|+
T Consensus 359 ~~~~~cg~g~gl~~~~N~~qI~~s-l~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~ 422 (591)
T PTZ00207 359 LWSIFCCVGAHFVIIFNARFIYTA-LAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRR 422 (591)
T ss_pred HHHHHHhhCchheeeecHHHHHHH-hcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhc
Confidence 999999888888888888888887 5 663333 333678899999999999999985555544
No 97
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.72 E-value=2e-15 Score=148.33 Aligned_cols=240 Identities=18% Similarity=0.173 Sum_probs=175.9
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHH---HHHHHHhh--hhH-HHHHHHHHHhhcc
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAF---LVPVAAGH--SIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~---~~~~~~~~--~~~-~~~~~r~l~G~~~ 100 (455)
.+..-|+...+++..+..+...+.++++|.++||+. +.+....+..+ ...+.... .+. .+++.-++.|++.
T Consensus 38 ~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~ 117 (524)
T PF05977_consen 38 TQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS 117 (524)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH
Confidence 344557889999999999999999999999999999 22222222211 11111111 233 7888999999999
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCC
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEP 180 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~ 180 (455)
+...|+.++++.|..|+|+...++++.+...++...+||.++|.+... .|-.+.|.+.++..++. +..+...++++
T Consensus 118 a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~---~G~~~~f~inalsfl~~-i~~l~~~~~~~ 193 (524)
T PF05977_consen 118 AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF---FGAAAAFLINALSFLIS-ILALLRWKPPP 193 (524)
T ss_pred HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHccccc
Confidence 999999999999999999999999999999999999999999999887 78888998887765553 33333333322
Q ss_pred CCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhh
Q psy3467 181 EAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTL 260 (455)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~ 260 (455)
+.++..+++-. ++-+..++.+.++|.+....+..++.+.........+|.+.++.+|.++...|++
T Consensus 194 ~~~~~~~e~~~--------------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll 259 (524)
T PF05977_consen 194 PPSSLPRERFF--------------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLL 259 (524)
T ss_pred cccccchhhhh--------------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHH
Confidence 21111111100 1122334555667777666665556566555666778999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 261 SALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+..++|.++|.+..+++.+|+++++.
T Consensus 260 ~a~~gvGai~Gal~~~~l~~~~~~~~l 286 (524)
T PF05977_consen 260 LAAFGVGAILGALLLPRLRRRLSSRRL 286 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 999999999999999999888877654
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.65 E-value=1.1e-13 Score=137.10 Aligned_cols=159 Identities=17% Similarity=0.057 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh---HHHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG---IGMLINSVFAFLVPV 80 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G---~~l~~~~~~~~~~~~ 80 (455)
...+..+..+.....+...++. +.+++|+++++.+++.+.+........+++|+++|| +| ..+.+..+..++...
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3334444444444334443333 357899999999999988877777777899999999 59 334444444444444
Q ss_pred HHhhh-hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCc--chhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCch
Q psy3467 81 AAGHS-IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTE--RSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPS 156 (455)
Q Consensus 81 ~~~~~-~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~ 156 (455)
...++ .. .+.+.|+++|++.|...+...+++.|++|+++ |..+.++++.+.++|..++|.+++++.++ .|||+
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~---~g~~~ 181 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK---YGWSV 181 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh---hCHHH
Confidence 44443 34 67788999999999999999999999998653 45678899999999999999999999988 89999
Q ss_pred hHHHhhHHHHH
Q psy3467 157 IFYVFGLVGAV 167 (455)
Q Consensus 157 ~f~~~~~~~~~ 167 (455)
.|.+.++..++
T Consensus 182 ~F~i~~i~~~i 192 (500)
T PRK09584 182 AFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHH
Confidence 99987754444
No 99
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.65 E-value=1.1e-14 Score=134.88 Aligned_cols=188 Identities=13% Similarity=0.022 Sum_probs=144.6
Q ss_pred hhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc-----------
Q psy3467 83 GHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF----------- 150 (455)
Q Consensus 83 ~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~----------- 150 (455)
..+++ .++++-++.|.|.+..++..+.++++..++|++++.+++.+.+.++|..++|.+++.+...+.
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 34567 999999999999999999999999999999999999999999999999999999998774210
Q ss_pred --CCCCchhHHHhhHHHHHHHHHhhh-hcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHH
Q psy3467 151 --AGGWPSIFYVFGLVGAVWSVAFLL-YCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIA 227 (455)
Q Consensus 151 --~~~wr~~f~~~~~~~~~~~i~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (455)
..+||++|++.+.+..+..+...+ -.||.++++ +++.. +++..+.++.+|+|.++...+.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~-----~~~~~------------~~~~~~~~~~~~~~~~~l~~~~ 148 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD-----VARVS------------SGDTTQKTSAFQFTHLVLGALG 148 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc-----ccccc------------cccccchhhHHhhHHHHHHHHH
Confidence 037999999776665553443322 223321111 00000 0000112456778888888888
Q ss_pred HHHHHHHHHHHHhhhhHHHHHH--hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 228 HMGQNYGYETLMTELPTFMKQV--LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++......+...|.+.|+++. +|+++.+.+...+.+..+..++++.++++.||+++|+.
T Consensus 149 ~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~ 210 (310)
T TIGR01272 149 IFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY 210 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 8887778889999999999864 68999999999999999999999999999999998754
No 100
>KOG0252|consensus
Probab=99.63 E-value=1.4e-15 Score=139.89 Aligned_cols=298 Identities=13% Similarity=0.143 Sum_probs=188.8
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH
Q psy3467 3 GVQHTAYSIFVSRVINTKLTRRVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV 78 (455)
Q Consensus 3 ~v~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~ 78 (455)
|....+|++|+-+.++..+......- .++=+.++...+.+..+..+|..+||++.|++.||+| ++.....+..+++
T Consensus 49 GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t 128 (538)
T KOG0252|consen 49 GFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICS 128 (538)
T ss_pred hhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHH
Confidence 44567788888888887777665432 2233466777889999999999999999999999999 3333333333443
Q ss_pred HHHHh-----hh--hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh---
Q psy3467 79 PVAAG-----HS--IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE--- 147 (455)
Q Consensus 79 ~~~~~-----~~--~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~--- 147 (455)
..++. ++ -. ++.+.|++.|+|.|+-+|...++.+|...+++||...+..-.....|...|.+++-.+..
T Consensus 129 ~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe 208 (538)
T KOG0252|consen 129 ALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFE 208 (538)
T ss_pred HHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHh
Confidence 33322 11 23 889999999999999999999999999999999999999888888888777766654432
Q ss_pred c---------ccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhc-------ccccC---CCCCC
Q psy3467 148 Y---------GFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSV-------WGLAG---VASSP 208 (455)
Q Consensus 148 ~---------~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~ 208 (455)
. ..+.-||..+-+.++++++ .....+.+||+++.+.-.+++.++..++.. .+++. ..+.+
T Consensus 209 ~~~~~~~~~~~ld~vWRl~~glg~vpa~~-~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~ 287 (538)
T KOG0252|consen 209 KIFNGPSTYPHLDGVWRIIFGLGAVPALL-VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPP 287 (538)
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHH-HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCc
Confidence 1 0012399998887777766 556677789988765211111111111100 00000 00111
Q ss_pred CCC---hhhhhcC---hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchh-----hch----hHHHHHHHHHH
Q psy3467 209 PVP---WKDIVSS---LPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGT-----LSA----LPYLAMWIFSM 273 (455)
Q Consensus 209 ~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~-----~~~----~~~~~~~~~~~ 273 (455)
..+ +.+.+.. +++...+..+++.-...+....+....++. .|+.+.+... ..- +...++++|..
T Consensus 288 ~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw 366 (538)
T KOG0252|consen 288 SNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYW 366 (538)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCcee
Confidence 111 2222222 345666677777777777777777777776 6877766554 100 11122233444
Q ss_pred HHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHHHH
Q psy3467 274 FASFIADSMITSEKFSHTSTRKIINAFLYQVLSFGMIVS 312 (455)
Q Consensus 274 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (455)
+...++|++|||+. ...++.+..+..+++
T Consensus 367 ~tv~~id~iGRk~i----------q~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 367 FTVYFIDIIGRKYI----------QLMGFFIMTIFFFVI 395 (538)
T ss_pred EEEEEeehhhhHHH----------HHhhHHHHHHHHHHH
Confidence 55668999999865 555665555444443
No 101
>KOG3626|consensus
Probab=99.59 E-value=4e-14 Score=139.64 Aligned_cols=281 Identities=13% Similarity=0.186 Sum_probs=210.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHH
Q psy3467 5 QHTAYSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLV 78 (455)
Q Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~ 78 (455)
....+..+.+++....+...+.++++.|+++.++.|++.+.+-++..+...+..+..-|.- ..++..++..+..
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 4556777888888888889999999999999999999999999999999999999988765 3344444433333
Q ss_pred HHH------------H-----------------------------------hhh--hH-HHHHHHHHHhhcccCchhhHH
Q psy3467 79 PVA------------A-----------------------------------GHS--IL-ALSIIRFIQGLGEGPIVPCTH 108 (455)
Q Consensus 79 ~~~------------~-----------------------------------~~~--~~-~~~~~r~l~G~~~~~~~~~~~ 108 (455)
.+- . ..+ .+ .++++.++.|+|....++.+.
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 211 0 001 23 788899999999999999999
Q ss_pred HHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCC----------------CCchhHHHhhHHHHHHHHHh
Q psy3467 109 ALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAG----------------GWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 109 ~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~----------------~wr~~f~~~~~~~~~~~i~~ 172 (455)
+|+-|...+|+-...+|++.....+|.++|.++++++.+...+. -|..-|++.+.+.++..+..
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987631111 15556777788877767776
Q ss_pred hhhcccCCCCCCCCChhHHHHHhhhcc-cccCC-----CCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 173 LLYCYEEPEAHPNIAEDERKYIMSSVW-GLAGV-----ASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 173 ~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
+++-++.|+.+++...++.+..+.+.. .++.. .++.....+++++||.+....+...+......+..+++|-|+
T Consensus 340 f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyL 419 (735)
T KOG3626|consen 340 FFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYL 419 (735)
T ss_pred HhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHH
Confidence 666555555443322222211111111 00000 011234457789999999999999999999999999999999
Q ss_pred HHHhcCccccchhhchhHHH-HHHHHHHHHHHHHHHhhhc
Q psy3467 247 KQVLHFNIKENGTLSALPYL-AMWIFSMFASFIADSMITS 285 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r 285 (455)
+.+||.+++++..+.....+ +..+|.+++|++.+|+.-+
T Consensus 420 E~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 420 ETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 99999999999988866554 4567788999999988755
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.59 E-value=3.2e-14 Score=138.82 Aligned_cols=242 Identities=17% Similarity=0.181 Sum_probs=181.4
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHh----HHh----HHHHHHHHHHHHHHHHHhh--------hhH-HHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAK----KYG----IGMLINSVFAFLVPVAAGH--------SIL-ALSI 91 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d----r~G----~~l~~~~~~~~~~~~~~~~--------~~~-~~~~ 91 (455)
.+.+|+++...|.+..+..+..++..|+.|.++| |+| ..+.+.....+........ ... .+.+
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence 4557999999999999999999999999999999 788 2222222222222211111 122 4577
Q ss_pred HHHHHhhcccCchhhHHHHHhcccC-CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc---C-CCCchhHHHhhHHHH
Q psy3467 92 IRFIQGLGEGPIVPCTHALLAKWIP-PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF---A-GGWPSIFYVFGLVGA 166 (455)
Q Consensus 92 ~r~l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~---~-~~wr~~f~~~~~~~~ 166 (455)
..++..++.......-.++..|..+ +|+|.+..+.-..+..+|..+...+.+.+.+..+ . .+|++..++.+++.+
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 7777799999999999999999997 5789999999999999998777666666553211 1 179999999999999
Q ss_pred HHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHH
Q psy3467 167 VWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFM 246 (455)
Q Consensus 167 ~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
+..++..+..||.+++.++ ++ ++.+.++.+++++|||+++.+.+..++............+.|.
T Consensus 189 v~~~i~~~~~ke~~~~~~~---~~-------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~ 252 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEVTE---QE-------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYF 252 (428)
T ss_pred HHhhhhhheeeeccccccc---cc-------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 8888888888882111110 00 0123445668899999999999998888888888888888888
Q ss_pred HHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 247 KQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 247 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
++..|.+ ...+.+.....++..++.++.++++||+|+|+.
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 8877766 556777778888999999999999999999987
No 103
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.58 E-value=1.7e-16 Score=156.28 Aligned_cols=277 Identities=13% Similarity=0.209 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHH--
Q psy3467 9 YSIFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPV-- 80 (455)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~-- 80 (455)
+..++..+.+......+.++++.|+++.++.|++.+.+-++..+..++..++.+|.. .+.+..++..+...+
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPh 89 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPH 89 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccH
Confidence 344455667777888889999999999999999999999999999999999998855 222222222221110
Q ss_pred ------------------------H-------------------H-hhh-hH-HHHHHHHHHhhcccCchhhHHHHHhcc
Q psy3467 81 ------------------------A-------------------A-GHS-IL-ALSIIRFIQGLGEGPIVPCTHALLAKW 114 (455)
Q Consensus 81 ------------------------~-------------------~-~~~-~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~ 114 (455)
+ . ... .+ .+++++++.|+|.+..++.+.+|+-|.
T Consensus 90 f~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDn 169 (539)
T PF03137_consen 90 FLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDN 169 (539)
T ss_dssp --------------------------------------------------------------SSS---------------
T ss_pred hhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccc
Confidence 1 0 000 13 888999999999999999999999999
Q ss_pred cCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc------c---------C----CCCchhHHHhhHHHHHHHHHhhhh
Q psy3467 115 IPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG------F---------A----GGWPSIFYVFGLVGAVWSVAFLLY 175 (455)
Q Consensus 115 ~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~------~---------~----~~wr~~f~~~~~~~~~~~i~~~~~ 175 (455)
.++|+-+..+|++.....+|.++|.++++.+.+.. + + .-|..-|++.+.+.++..++.++|
T Consensus 170 v~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 170 VSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999998776420 0 0 126666777777777767776666
Q ss_pred cccCCCCCCCCChhHH--HHHhhhc----cccc------CCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhh
Q psy3467 176 CYEEPEAHPNIAEDER--KYIMSSV----WGLA------GVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELP 243 (455)
Q Consensus 176 ~~e~~~~~~~~~~~~~--~~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
-++-|+.++..++++. ...++.. .+++ ...++.....+++++||.+....+..........++.++.|
T Consensus 250 Pk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~p 329 (539)
T PF03137_consen 250 PKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLP 329 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554111111110 0000000 0000 11133345568899999999999999999999999999999
Q ss_pred HHHHHHhcCccccchhhchhHHH-HHHHHHHHHHHHHHHhhhc
Q psy3467 244 TFMKQVLHFNIKENGTLSALPYL-AMWIFSMFASFIADSMITS 285 (455)
Q Consensus 244 ~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r 285 (455)
.|++.+++.++.+++++.....+ +.++|.+++|++.+|++-+
T Consensus 330 KylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 330 KYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp -------------------------------------------
T ss_pred HHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 99999999999999988866554 6678889999999998755
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.58 E-value=2.1e-12 Score=125.44 Aligned_cols=157 Identities=18% Similarity=0.094 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHhhhhhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH-h---HHHHHHHHHHHHHHHHH
Q psy3467 8 AYSIFVSRVINTKLTRRVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY-G---IGMLINSVFAFLVPVAA 82 (455)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-G---~~l~~~~~~~~~~~~~~ 82 (455)
.+.....+.....+...++.. .+++|+++.+.+.+.+.+.....++.+++|+++||+ | ..+.+..+..+......
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~ 94 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG 94 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 333444444433333333333 456899999999999999999999999999999999 8 23333333333332322
Q ss_pred hhh-hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCC--cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhH
Q psy3467 83 GHS-IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT--ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIF 158 (455)
Q Consensus 83 ~~~-~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f 158 (455)
..+ +. .+.+...+.++|.|...+...++++|.+|++ +|..+.++.+.+.++|..++|.+.+++.+. .|||+.|
T Consensus 95 ~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~---~Gw~~~F 171 (493)
T PRK15462 95 ASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE---YSWAMGF 171 (493)
T ss_pred HhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh---hChHHHH
Confidence 222 11 3333444445566667777889999999875 799999999999999999999999999887 8999999
Q ss_pred HHhhHHHHH
Q psy3467 159 YVFGLVGAV 167 (455)
Q Consensus 159 ~~~~~~~~~ 167 (455)
.+.++..++
T Consensus 172 ~iaaigm~l 180 (493)
T PRK15462 172 GLAAVGMIA 180 (493)
T ss_pred HHHHHHHHH
Confidence 986654433
No 105
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.57 E-value=8e-13 Score=127.84 Aligned_cols=252 Identities=13% Similarity=0.060 Sum_probs=161.6
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHh----HHh---HHHHHHHH-HHHHHHHHHhhhhH---------
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAK----KYG---IGMLINSV-FAFLVPVAAGHSIL--------- 87 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d----r~G---~~l~~~~~-~~~~~~~~~~~~~~--------- 87 (455)
++.+.+++|.+..+.+++..+..+...+.+++.|.++| |+| ..++...+ ..+...+..++++.
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 33355678999999999999999999999999999999 599 22222122 22222222222221
Q ss_pred ---------HHHHHHHHHhhcccCchhhHHHHHhcccCCCcc--hhHHHHHHhhHHHHHHHHHHHHHHhH--hc-c----
Q psy3467 88 ---------ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTER--SRLGAFVYAGAQFGTVFSLPLSGLLS--EY-G---- 149 (455)
Q Consensus 88 ---------~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~~G~~~g~~i~~~l~--~~-~---- 149 (455)
..+++-.+..++.....+...++++|.+|+++| +.+.++.+...++|..+|+.+++... +. +
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~ 186 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT 186 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc
Confidence 112222233447777788889999999998865 68999999999999999999998752 11 0
Q ss_pred ---c--CCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcC-----h
Q psy3467 150 ---F--AGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSS-----L 219 (455)
Q Consensus 150 ---~--~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 219 (455)
. ..+.|..|++.++..++..++..+..||.|..+++..+++ + . + +.++.+....+++++++ |
T Consensus 187 ~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~-~----~--~~~~~~~~~~~~~i~~~~~~mP~ 258 (477)
T TIGR01301 187 EACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-E-A----A--PPSKHGEEAFFGELFGAFKYLPR 258 (477)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-h-c----c--cccccchhhhHHHHHHHHHHCCH
Confidence 0 0156889999888888888888889999764322111000 0 0 0 00001111233444432 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhcCccccc---------h-hhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQ-VLHFNIKEN---------G-TLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~---------g-~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
.++.+++..++.+++...+..+.+.+..+ .++.++.+. | +....+.+...+.+++..++.+|+|+
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 68899999999999999999999988764 565543221 1 12222334444555566667777774
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.55 E-value=1.5e-12 Score=124.39 Aligned_cols=258 Identities=16% Similarity=0.161 Sum_probs=171.4
Q ss_pred HHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhhhH
Q psy3467 12 FVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHSIL 87 (455)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~~~ 87 (455)
++.-.......|.++..-++.|.|.+|+|.+.++..+...+.++++|.++||++ +..+...+..+........+++
T Consensus 12 f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f 91 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSF 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 333444444555666667778999999999999999999999999999999998 2222222233333333344455
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHH-HHHhHhcccCCCCchhHHHhhHHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPL-SGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i-~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
.+++.-++..+......|...++..+... +++.-.|-.-...++|.+++... +..+....+..+....+++.+..+
T Consensus 92 ~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (400)
T PF03825_consen 92 WWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILS 169 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 66777777788888888999998888875 34445566666677777666443 233333200022334556655554
Q ss_pred HHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy3467 166 AVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTF 245 (455)
Q Consensus 166 ~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
++ .....+.+|+.|.+++..+ +.+ ++...+..+++|+|++....+..++..........+.+.|
T Consensus 170 ~l-l~~~~l~lp~~~~~~~~~~-~~~--------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~y 233 (400)
T PF03825_consen 170 LL-LAGFALFLPKTPPKRSAKE-SVK--------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIY 233 (400)
T ss_pred HH-HHHHHHhCCCCccccccCC-Ccc--------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 3333445677663221111 100 1122233679999999988888888888888889999999
Q ss_pred HHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 246 MKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 246 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+++.-|.+....+...+...+++++.-...+++.+|+|.|+.
T Consensus 234 l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l 275 (400)
T PF03825_consen 234 LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL 275 (400)
T ss_pred HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999433677777877777778888888889999999998754
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.54 E-value=7e-14 Score=137.20 Aligned_cols=255 Identities=12% Similarity=0.013 Sum_probs=158.9
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--------HHHHHHHHH-HHHHHHHHhhhhH--HHHHHH
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--------IGMLINSVF-AFLVPVAAGHSIL--ALSIIR 93 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--------~~l~~~~~~-~~~~~~~~~~~~~--~~~~~r 93 (455)
.+.+.+++|+|.++++...++..+...+-.+ +|+++||++ ..++...+. .......+..++. ...+..
T Consensus 49 ~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 127 (468)
T TIGR00788 49 SPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFI 127 (468)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 3445667999999999999999999988555 999999995 222222222 1221222222333 444588
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHH---HHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLG---AFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~---~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
++.+++.+...++..++..|..+ |++.... +......++|..+++.+++.+.+. .+||..|++.+.+.++. .
T Consensus 128 ~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~-~ 202 (468)
T TIGR00788 128 FLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK---TLTRILFLITAALLLLQ-L 202 (468)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHH-H
Confidence 99999999999999999999998 5554433 333444568999999999999988 89999999988887775 4
Q ss_pred HhhhhcccCCC-CCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHH-HHHHHHHHhhhhHHHHH
Q psy3467 171 AFLLYCYEEPE-AHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQ-NYGYETLMTELPTFMKQ 248 (455)
Q Consensus 171 ~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (455)
....++||++. ..++..+++...............++...+.++.+++|.++...+..++. ........... .+.++
T Consensus 203 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~ 281 (468)
T TIGR00788 203 FVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQ 281 (468)
T ss_pred HHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcc
Confidence 44566787642 11111110000000000000000001112234567778877655544442 11111111110 12234
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
..|+++.+.|......+++.+++....+++.+|++.|+
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~ 319 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL 319 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 58999999999999988888888888888888877664
No 108
>PRK09669 putative symporter YagG; Provisional
Probab=99.52 E-value=6.2e-13 Score=130.40 Aligned_cols=241 Identities=14% Similarity=0.068 Sum_probs=156.9
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh---HHHH-HHHHHHHHHHHHHhh------hhH-HHHHH
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG---IGML-INSVFAFLVPVAAGH------SIL-ALSII 92 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G---~~l~-~~~~~~~~~~~~~~~------~~~-~~~~~ 92 (455)
..+++|++..++|.+.++..+..++..|+.|.++|| +| ..++ +.....+........ ... .+++.
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVT 115 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 345789999999999999999999999999999999 66 2222 222222222221111 123 55666
Q ss_pred HHHHhhcccCchhhHHHHHhccc-CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc----ccCCCCchhHHHhhHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWI-PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY----GFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~----~~~~~wr~~f~~~~~~~~~ 167 (455)
..+.+.+.......-.++.+|+. +++||++..+....+..+|..+++.+...+... ....+|+..+.+.+++.++
T Consensus 116 ~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v 195 (444)
T PRK09669 116 YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVV 195 (444)
T ss_pred HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 66667666667677778999998 568899998998888888888887665444332 0114788888888887777
Q ss_pred HHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q psy3467 168 WSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMK 247 (455)
Q Consensus 168 ~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (455)
..+..++..+|.++.+++ ++ .+...+.++++|||+++.+....++............+.|.+
T Consensus 196 ~~~~~~~~~~e~~~~~~~----~~--------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~ 257 (444)
T PRK09669 196 LFFCCFFMTKERYTPEVD----NS--------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVN 257 (444)
T ss_pred HHHHHhCCeEEecCCCCc----CC--------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeee
Confidence 666666666664322110 00 112234577889999888877766655555444443443334
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
...+ ++...+.+.....+..+++.++.+++.||+|+|+.
T Consensus 258 ~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~ 296 (444)
T PRK09669 258 YVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRA 296 (444)
T ss_pred eecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 3222 23333344445556777888889999999998864
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.52 E-value=2.2e-13 Score=134.44 Aligned_cols=245 Identities=9% Similarity=-0.016 Sum_probs=160.3
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHh----HHh---HHHHHHHHH-HHHHHHHHh----hhh--H-HHHHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAK----KYG---IGMLINSVF-AFLVPVAAG----HSI--L-ALSIIR 93 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d----r~G---~~l~~~~~~-~~~~~~~~~----~~~--~-~~~~~r 93 (455)
.+.+|++..++|.+..+..+.-++..|+.|.++| |+| ..++...+. .+....... .+. . .+++..
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~ 113 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTY 113 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence 3457999999999999999999999999999999 568 222222222 222121111 111 2 455666
Q ss_pred HHHhhcccCchhhHHHHHhccc-CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc----ccCCCCchhHHHhhHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWI-PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY----GFAGGWPSIFYVFGLVGAVW 168 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~----~~~~~wr~~f~~~~~~~~~~ 168 (455)
.+.+++.....+...++..|.. +++||.+..+.-..+.++|..+.+.+...+.+. +...+|+....+.+++.++.
T Consensus 114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~ 193 (473)
T PRK10429 114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS 193 (473)
T ss_pred HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 6777778778888889999999 688999999987777777766665554433221 01135777777777776665
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
.+..++..||.++.+...+++ + ++.+.++.++.+++||.++.+....++.+..........+.|.+.
T Consensus 194 ~~~~~~~~~e~~~~~~~~~~~-~------------~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y 260 (473)
T PRK10429 194 TIITLRNVHEVYSSDNQVSAE-G------------SHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTY 260 (473)
T ss_pred HHHHHcCceecCCcccccccc-c------------cCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEE
Confidence 666666667753221100000 0 001122334556789888888887777777666666666655554
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
. ..++...+.+.....++.+++.++.+++.||+|+|+.
T Consensus 261 ~-~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~ 298 (473)
T PRK10429 261 V-IGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL 298 (473)
T ss_pred E-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 3 3345556666666678888999999999999999864
No 110
>KOG2563|consensus
Probab=99.47 E-value=2.1e-12 Score=119.27 Aligned_cols=246 Identities=15% Similarity=0.129 Sum_probs=181.3
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH---HHHHhh---h-hH--HHHHHH
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV---PVAAGH---S-IL--ALSIIR 93 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~---~~~~~~---~-~~--~~~~~r 93 (455)
+...+-++ +....-|..-+|++.+....+++-++.||+| ..++....-.++. .++... + .+ ....+.
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq 147 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQ 147 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhH
Confidence 33444466 6667789999999999999999999999999 3333333333333 333222 1 11 566788
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc---cCCCCch--hHHHhhHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG---FAGGWPS--IFYVFGLVGAVW 168 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~---~~~~wr~--~f~~~~~~~~~~ 168 (455)
.+.+.++-........+..-|++++||..+..+-..+..+|.+++.++...+..+. ....|-. .|+..+.++.+.
T Consensus 148 ~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~ 227 (480)
T KOG2563|consen 148 SIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALL 227 (480)
T ss_pred HHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 89888888777777788899999999999999999999999999999998887653 1134544 355555555554
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
.++..+..++.|+.++..+.+..+ ..+-..+.+++++|+++..+.+.+......++...+.+...+..
T Consensus 228 l~l~~~~~~~~P~tPps~s~~~~~------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~ 295 (480)
T KOG2563|consen 228 LALVLFVFTKKPPTPPSASQAALQ------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP 295 (480)
T ss_pred HHHHHHhcCCCCCCCCchhHhhhh------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc
Confidence 555666667766665544333322 02245566889999999999999999888888888877766666
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
-|++...+|.......+++.++.+.+|.+.||.+.-
T Consensus 296 -sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 296 -SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred -ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 478878999999999999999999999999998763
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.45 E-value=5.7e-12 Score=123.77 Aligned_cols=240 Identities=10% Similarity=-0.012 Sum_probs=149.1
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH----h---HHHHHHHH-HHHHHHHH-----Hhhhh--H-HHHH
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY----G---IGMLINSV-FAFLVPVA-----AGHSI--L-ALSI 91 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~----G---~~l~~~~~-~~~~~~~~-----~~~~~--~-~~~~ 91 (455)
+.+++|++..++|.+.++..+..++..++.|.++||. | ..+....+ ..+..... ...++ . ..+.
T Consensus 35 ~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (448)
T PRK09848 35 YTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYL 114 (448)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHH
Confidence 4566899999999999999999999999999999997 4 12222221 11111111 11111 1 3444
Q ss_pred HHHHHhhcccCchhhHHHHHhcccCC-CcchhHHHHHHhhH-----HHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH
Q psy3467 92 IRFIQGLGEGPIVPCTHALLAKWIPP-TERSRLGAFVYAGA-----QFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 92 ~r~l~G~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~-----~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
...+.+++.+...+...++..|..++ +||.+..+.-..+. .+|..++|.+++...... ..+|.....+.++++
T Consensus 115 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~-~~~~~~~~~~~~v~~ 193 (448)
T PRK09848 115 TYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM-VSVYHFWTIVLAIAG 193 (448)
T ss_pred HHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch-hhhHHHHHHHHHHHH
Confidence 55677877877777777777777754 67888877665443 345556666655432110 011211112223333
Q ss_pred HHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy3467 166 AVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTF 245 (455)
Q Consensus 166 ~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (455)
++..++.....||+++.+.+. +.....+++++|||.++...+..++............|.+
T Consensus 194 ~~~~~~~~~~~~e~~~~~~~~-------------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~ 254 (448)
T PRK09848 194 MVLYFICFKSTRENVVRIVAQ-------------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFY 254 (448)
T ss_pred HHHHHHHHcCcEeccCCCccC-------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheee
Confidence 333333334445543221100 1112235778999999988888888888777777788888
Q ss_pred HHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 246 MKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 246 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++.+|.++...++......++..++.++.+++.||+++|+.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~ 296 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT 296 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 888788776655554444456778888999999999998754
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.44 E-value=8e-12 Score=117.32 Aligned_cols=242 Identities=14% Similarity=0.131 Sum_probs=150.2
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHH-HHHHHHH--Hh-----hhhH-HHHHHHHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVF-AFLVPVA--AG-----HSIL-ALSIIRFIQ 96 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~-~~~~~~~--~~-----~~~~-~~~~~r~l~ 96 (455)
.++.|+|.+++|.+.++..+...+.+++.|.++||.| ..+....+. .....+. .+ .+.+ ..+++-...
T Consensus 35 ~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l 114 (412)
T PF01306_consen 35 TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL 114 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999999999999999999 222221111 1111111 11 1111 333333444
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhc
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYC 176 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~ 176 (455)
|+...+..|+.-+++.++. ++.+.=.|-.-...++|.+++..++|.+.+. +-+..||+....+++..++..+..
T Consensus 115 ~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i----~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI----NPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee----CccHHHHHHHHHHHHHHHHHHHcC
Confidence 5555555566666655554 3445556777788889999999999998774 446788877666666555555555
Q ss_pred ccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh---cCc
Q psy3467 177 YEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVL---HFN 253 (455)
Q Consensus 177 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s 253 (455)
|+.+++.+..+.++.+ +++...++..+++|+|++|.+.+........+.......+.|.++.+ +.+
T Consensus 189 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g 257 (412)
T PF01306_consen 189 PDVPPQAEVADALGAK-----------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQG 257 (412)
T ss_dssp --SSSSS-SSTTSSS-----------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHH
T ss_pred CcCchhhhhhcccccC-----------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 5544332211111100 00111223467899999999888777777777777777777776522 234
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
....|++.+...+..++.-.+..++.+|+|.|+.
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~ 291 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL 291 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH
Confidence 4557888888888899999999999999999965
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.44 E-value=7.2e-11 Score=115.06 Aligned_cols=240 Identities=15% Similarity=0.103 Sum_probs=178.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHHh---H-HHHHHHHHHHHHHHHHh--hhhH-HHHHHHHHHhhcccCchhhHHH
Q psy3467 37 AEQGYVLSSFFYGYVLTQIPFGILAKKYG---I-GMLINSVFAFLVPVAAG--HSIL-ALSIIRFIQGLGEGPIVPCTHA 109 (455)
Q Consensus 37 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~-~l~~~~~~~~~~~~~~~--~~~~-~~~~~r~l~G~~~~~~~~~~~~ 109 (455)
+..++..++..+..++..|+.|.++|+-| . ......+..+......+ .+++ ...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999888 2 22222222222222222 3344 5556666666777788889999
Q ss_pred HHhcccCCCcc--------------------------hhHHHHHHhhHHHHHHHHHHHHHHhHhccc-----CCCCchhH
Q psy3467 110 LLAKWIPPTER--------------------------SRLGAFVYAGAQFGTVFSLPLSGLLSEYGF-----AGGWPSIF 158 (455)
Q Consensus 110 ~i~e~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~-----~~~wr~~f 158 (455)
++.|..+++++ ++..+.-.....+|..+.-.+.-.+..... ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 899888888888988888777765543211 12358889
Q ss_pred HHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHH
Q psy3467 159 YVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETL 238 (455)
Q Consensus 159 ~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (455)
.+.++.-++..++.++++||.|+.++..+.... ..... ++-...++++.|.|.+....+..++..-+..++
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti 300 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LRFGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTI 300 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HHHHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999998763222111111 00000 112334567778889999999999999999999
Q ss_pred HhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 239 MTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 239 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
......|.++++|++..+...+.....+..++|.++.|++.||+|.|
T Consensus 301 ~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 301 ISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999998888889999999999999999999998
No 114
>KOG4686|consensus
Probab=99.43 E-value=1.7e-13 Score=118.26 Aligned_cols=247 Identities=15% Similarity=0.166 Sum_probs=170.8
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh------HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG------IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G------~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
.+.+.|.+++.++..++.++|..-..+..++.|++.|| +| +..+...+..+........+.+ +++.+||+.|
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence 45677888999999999999999999999999999996 44 3333333333443334445566 9999999999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCC------ch---hHHHhhHHHHHH
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGW------PS---IFYVFGLVGAVW 168 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~w------r~---~f~~~~~~~~~~ 168 (455)
+|.-....+-+++...|+..||.+.++|+......+|+.+--.+.+++.+. .+- .. .....+...+..
T Consensus 148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~---~~~~~~~~ghT~LG~~l~~~~~tc~~ 224 (459)
T KOG4686|consen 148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT---MGRMFPGVGHTLLGLWLCFEVKTCKQ 224 (459)
T ss_pred cCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH---HHHhcccchHHHHHHHHHHHHHHHHH
Confidence 999888888899999999999999999999999999998887777777664 210 00 011111111111
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhh-cChhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIV-SSLPFWAILIAHMGQNYGYETLMTELPTFMK 247 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (455)
..+...-+- ..+.+.|+..+. ++.... ++++. .+.. -.|++|.+.+++++.+....-+....|.+++
T Consensus 225 slical~lg----~~D~rAerilh~-e~g~~G-----e~pkL--tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~ 292 (459)
T KOG4686|consen 225 SLICALSLG----LSDDRAERILHL-EEGFLG-----EEPKL--TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQ 292 (459)
T ss_pred HHHHHHHhh----hhhhHHHHHHhh-hcCccc-----CCccc--ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 111111000 000000111000 000000 11111 1111 1368999999999999888888899999999
Q ss_pred HHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 248 QVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 248 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+++|+|+..++.+.+.......+.+++.|.++||.|++-.
T Consensus 293 ~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~ 332 (459)
T KOG4686|consen 293 KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW 332 (459)
T ss_pred HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh
Confidence 9999999999999999999999999999999999999843
No 115
>PRK11462 putative transporter; Provisional
Probab=99.39 E-value=1.2e-10 Score=114.41 Aligned_cols=238 Identities=15% Similarity=0.027 Sum_probs=157.8
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh---HHH-HHHHHHHHHHHHHHhhh------hH-HHHHHHH
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG---IGM-LINSVFAFLVPVAAGHS------IL-ALSIIRF 94 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G---~~l-~~~~~~~~~~~~~~~~~------~~-~~~~~r~ 94 (455)
+..|++...+|.+..+.-+--++..|+.|.++|| +| ..+ .+.....+...+.-..+ .. .+.+.-.
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~ 117 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYT 117 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4678999999999999999999999999999996 56 222 22222222222221111 12 4556666
Q ss_pred HHhhcccCchhhHHHHHhcccC-CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc----CCCCchhHHHhhHHHHHHH
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIP-PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF----AGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~----~~~wr~~f~~~~~~~~~~~ 169 (455)
+..++.......-.++..|..+ +|||++..++...+..+|..+++.+...+.+..+ ..+|+....+.+++.++..
T Consensus 118 ~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 118 LLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 6777787777888889999987 6899999999999999998888777655444210 1357777777777766655
Q ss_pred HHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 170 VAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 170 i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
.+.+...+|.++.++. + .+.+...+..++||.++.+....++..............|.+..
T Consensus 198 ~i~~~~~kE~~~~~~~-----~--------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~ 258 (460)
T PRK11462 198 AFCFFTTKERVEAPPT-----T--------------TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI 258 (460)
T ss_pred HHHHhcceeccCCCcc-----C--------------CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh
Confidence 5555555664322110 0 01122346778888887776665555555554444455555543
Q ss_pred hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 250 LHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 250 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+|. +...+.+.....++.+++.++++++.||+++|+.
T Consensus 259 ~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~ 295 (460)
T PRK11462 259 LGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTI 295 (460)
T ss_pred cCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 443 3334555667778888899999999999998753
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.39 E-value=2.4e-12 Score=104.53 Aligned_cols=133 Identities=25% Similarity=0.443 Sum_probs=108.1
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCC
Q psy3467 43 LSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT 118 (455)
Q Consensus 43 ~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~ 118 (455)
.+.+.++..+++++.|++.||+| ..........+........++. .+.+.+++.|++.+...+....++.|..|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567888999999999999999 3333333333333334444566 8888999999999999999999999999999
Q ss_pred cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 119 ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 119 ~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+|++..+..+....+|..++|.+.+.+.+. .+||+.+++.+.+.++..+..+++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQF---LGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcc---cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999887 899999999888877766666666555
No 117
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.35 E-value=6e-11 Score=112.62 Aligned_cols=245 Identities=14% Similarity=0.074 Sum_probs=182.5
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh----HHHHHHHHHHHHHHHHHhhh------hH-HHHHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG----IGMLINSVFAFLVPVAAGHS------IL-ALSIIR 93 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G----~~l~~~~~~~~~~~~~~~~~------~~-~~~~~r 93 (455)
.+..|++...+|.+..+.-+--++..|+.|.++|| +| ..+.+.....+...+.-.++ .. ..++..
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 45689999999999999999999999999999996 66 33333333333333332222 23 667778
Q ss_pred HHHhhcccCchhhHHHHHhcccC-CCcchhHHHHHHhhHHHHHHHHHHHHHHhHh----cccCCCCchhHHHhhHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIP-PTERSRLGAFVYAGAQFGTVFSLPLSGLLSE----YGFAGGWPSIFYVFGLVGAVW 168 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~----~~~~~~wr~~f~~~~~~~~~~ 168 (455)
.+.+++.......-.++..|+.+ ++||.+..+.-+.+.++|..+...+...+.. .+...||+..-.+.++++++.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 88899999888888889999885 6899999999999999997776666554443 111257888888888888887
Q ss_pred HHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy3467 169 SVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQ 248 (455)
Q Consensus 169 ~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (455)
.+.+++-.+|.+.+....+++.+ .+....+..++||+++...++...+..............|.+.
T Consensus 200 ~l~~~~~v~ER~~~~~~~~~~~~--------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y 265 (467)
T COG2211 200 LLFCFFNVKERVVETQPTKTGVK--------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHhhcccCccccCccccc--------------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE
Confidence 88888888887653222111111 1122233467899999999888888888887777888888888
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+|.+..+..........+.+++.++...+.+|+|+|+.
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~ 304 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL 304 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH
Confidence 888888888888878888888889999999999999976
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.33 E-value=3.8e-11 Score=116.51 Aligned_cols=145 Identities=17% Similarity=0.213 Sum_probs=114.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh-h---hhH-HHHHHHHHHhhcccCchhhH
Q psy3467 36 TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG-H---SIL-ALSIIRFIQGLGEGPIVPCT 107 (455)
Q Consensus 36 ~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~-~---~~~-~~~~~r~l~G~~~~~~~~~~ 107 (455)
.++.+...++..++..++.++.|+++||+| .......+..+....... . .+. .+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 467799999999999999999999999999 222222222222222222 1 123 66778999999998888999
Q ss_pred HHHHhcccCCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccC---CCCchhHHHhhHHHHHHHHHhhhhcccCC
Q psy3467 108 HALLAKWIPPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFA---GGWPSIFYVFGLVGAVWSVAFLLYCYEEP 180 (455)
Q Consensus 108 ~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~---~~wr~~f~~~~~~~~~~~i~~~~~~~e~~ 180 (455)
..++.|++|+++|+++.++.+ ....+|..+||.+++.+.++... .|||..|.+.+++.++..++.++++||+.
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999997 67889999999999999886221 36999999999988888888888888763
No 119
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.31 E-value=1.6e-12 Score=128.47 Aligned_cols=58 Identities=40% Similarity=0.566 Sum_probs=54.3
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeeecccC
Q psy3467 397 PPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVRVTSS 454 (455)
Q Consensus 397 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~~~p~ 454 (455)
.+.||+++++++++|...+++++.++.++.+.+|+|+|++|++|+|.++.|++.++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~ 307 (465)
T TIGR00894 250 QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPY 307 (465)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999999887775
No 120
>KOG2325|consensus
Probab=99.30 E-value=4.1e-10 Score=107.24 Aligned_cols=246 Identities=13% Similarity=0.106 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcc--cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHH
Q psy3467 6 HTAYSIFVSRVINTKLTRRVHHKDGS--FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVP 79 (455)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~ 79 (455)
...+..++..+-.+.+.+..-+..++ .+.+.+..|++.++..++.++++++.|..+.|.+ ..+.+..+..++..
T Consensus 38 l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~l 117 (488)
T KOG2325|consen 38 LALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNL 117 (488)
T ss_pred HHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHH
Confidence 34445555555555554444444444 6778888999999999999999999999999999 33333333333333
Q ss_pred HH----Hhhh-hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC
Q psy3467 80 VA----AGHS-IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG 153 (455)
Q Consensus 80 ~~----~~~~-~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~ 153 (455)
+. -..+ .- .++++|++.|+|.+ ......+++++-...++|.++++....+..+|..+||.+...+...+. .|
T Consensus 118 lY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~-~G 195 (488)
T KOG2325|consen 118 LYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE-KG 195 (488)
T ss_pred HHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC-Cc
Confidence 32 2233 23 99999999999977 668889999999999999999999999999999999999887765311 12
Q ss_pred -----------CchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHH
Q psy3467 154 -----------WPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFW 222 (455)
Q Consensus 154 -----------wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (455)
...+-|+.+++.++..+...++.+|.++.....+.++.+ +. +.++++.+.++.+ .+..+
T Consensus 196 ~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~d------~~~~~ 265 (488)
T KOG2325|consen 196 FMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVE---EE-KSDIEKVKKPKLD------WVAVL 265 (488)
T ss_pred eEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccch---hh-ccchhhhccCChh------HHHHH
Confidence 234567788888888888888888876544222111110 00 0000000111222 12344
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchh
Q psy3467 223 AILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSAL 263 (455)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 263 (455)
.+.+..+...+......+..+......++++.+++-...+.
T Consensus 266 vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi 306 (488)
T KOG2325|consen 266 VCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGI 306 (488)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhh
Confidence 55556666666666667777777777788887776555544
No 121
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.28 E-value=4e-10 Score=104.19 Aligned_cols=235 Identities=14% Similarity=0.072 Sum_probs=157.4
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---------HHHHHHHHHHHHHHHHH-----hh--------hh
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---------IGMLINSVFAFLVPVAA-----GH--------SI 86 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---------~~l~~~~~~~~~~~~~~-----~~--------~~ 86 (455)
..|++++.+..+.+.++..+.. ...+.+|..||+.+ ....+............ .. +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 4578888989999999888766 46999999999866 11112222111111111 11 12
Q ss_pred H----HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCC-chhHHH-
Q psy3467 87 L----ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGW-PSIFYV- 160 (455)
Q Consensus 87 ~----~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~w-r~~f~~- 160 (455)
+ .......+.|+|.+...+...++++|..|||+|+++.++......+|.+++..+.+.+.+. .+- |-.-.+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~---~s~~rL~~v~~ 162 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP---FSPERLIQVIQ 162 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc---cCHHHHHHHHH
Confidence 2 3445567889999999999999999999999999999999999999999999999988765 332 222222
Q ss_pred -hhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHH
Q psy3467 161 -FGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLM 239 (455)
Q Consensus 161 -~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (455)
.+++.++..++. .+-.|.++.++...++ +++......++++.++|+........++....+..=-
T Consensus 163 ~~a~i~~~l~~ia-~wg~E~r~~~~~~~~~-------------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD 228 (403)
T PF03209_consen 163 GVALIALLLNLIA-LWGQEPRRSRRAAAAE-------------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQD 228 (403)
T ss_pred HHHHHHHHHHHHH-HHhcccCCcccccCCC-------------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhH
Confidence 222222212222 2222322222110000 0112233455677788887777777777666666656
Q ss_pred hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHH
Q psy3467 240 TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADS 281 (455)
Q Consensus 240 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 281 (455)
..+-+|--+.+|+++.|+..+......+..++-...|++..|
T Consensus 229 ~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 229 VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 777888888999999999999999999999999999887774
No 122
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.26 E-value=2.6e-10 Score=113.33 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=106.9
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H-HHHHHHHHHHHH---HHHHhhhhH-HHHHHHHHHhhccc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I-GMLINSVFAFLV---PVAAGHSIL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~-~l~~~~~~~~~~---~~~~~~~~~-~~~~~r~l~G~~~~ 101 (455)
++++|.+..+.++..+...++..++.++.|+++||+| . .+.......+.. .....+++. .++++|++.|++.+
T Consensus 278 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 357 (490)
T PRK10642 278 SHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN 357 (490)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 3567888888888888899999999999999999999 2 222221111111 111223345 77788999988777
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCC
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPE 181 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~ 181 (455)
........++.|.+|++.|+++++.......++..++|.+.+.+.+.. .+|+..++...+++++..+ ..+++||+|+
T Consensus 358 ~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~--~~~~~~~~~~~~~~~i~~~-~~~~~pes~~ 434 (490)
T PRK10642 358 CFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST--QNLMMPAYYLMVVAVIGLI-TGVTMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHH-HHHHhccccC
Confidence 666777888899999999999999754445566678888888887641 3578777766666655343 4456799987
Q ss_pred CC
Q psy3467 182 AH 183 (455)
Q Consensus 182 ~~ 183 (455)
+.
T Consensus 435 ~~ 436 (490)
T PRK10642 435 RP 436 (490)
T ss_pred CC
Confidence 54
No 123
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.26 E-value=2e-11 Score=119.98 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=112.0
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-----HHHHHHHHH--HHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-----IGMLINSVF--AFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-----~~l~~~~~~--~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
+...+++|.+..+.+++.++..++..+++++.|.++||.. ...+..+.. ..........++. .+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3444567899999999999999999999999999999743 122222111 1222233344556 7788999999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCC-CCchhHHHhhHHHHHHH
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAG-GWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~-~wr~~f~~~~~~~~~~~ 169 (455)
++.+...+...+++.|.+|+++|++.+++++....+|..+||.+++.+.+. . +|++.|++.+++.++..
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~---~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA---TKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh---cCCcchHHHHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998876 5 69999999887766543
No 124
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=5.4e-10 Score=103.08 Aligned_cols=242 Identities=13% Similarity=0.047 Sum_probs=175.5
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHH-HHhhh--hH-HHHHHHHHHhhcccCchhh
Q psy3467 35 TTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPV-AAGHS--IL-ALSIIRFIQGLGEGPIVPC 106 (455)
Q Consensus 35 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~-~~~~~--~~-~~~~~r~l~G~~~~~~~~~ 106 (455)
+.+..+...++..+..++.+|+.|.++|+.| ..-....+....... ....+ .+ ..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3456788999999999999999999999999 111111222222111 11122 34 7777888889999989999
Q ss_pred HHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc---------------ccCCCCchhHHHhhHHHHHHHHH
Q psy3467 107 THALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY---------------GFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 107 ~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~---------------~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
-.+++.|..++++-++..++-.....+|..+.-.+.-...-. .+..+-|..+.+.++.-++..++
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999998888887776666666666555443211110 01135688888888888888888
Q ss_pred hhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhc
Q psy3467 172 FLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLH 251 (455)
Q Consensus 172 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 251 (455)
.++..|+.++.....+ +...+.. ++-..++++..+++.+....++.++..-+.+++......|....+|
T Consensus 216 m~~~v~~~~~~~~~~~----~~l~~g~-------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~g 284 (438)
T COG2270 216 MILNVHDAEKISSPPP----TALRNGF-------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLG 284 (438)
T ss_pred HHhcccccccccccch----HHHHHHH-------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence 8888887665321111 1111111 1223456788888888999999999999999999999999998899
Q ss_pred CccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 252 FNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 252 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
++..+..++.....+..+++.++.|++.||+|.|++
T Consensus 285 ls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v 320 (438)
T COG2270 285 LSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV 320 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 999999999999999999999999999999999976
No 125
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.25 E-value=2.6e-09 Score=97.27 Aligned_cols=240 Identities=14% Similarity=0.045 Sum_probs=155.8
Q ss_pred hhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhc
Q psy3467 23 RRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 23 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~ 99 (455)
|.+-.+-+++|.++.|++.+....+...++..++.|.++||+| ...+..++.-..+.+....+++ .++++|++.|++
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 3344455679999999999999999999999999999999999 4444455544455556666777 999999999999
Q ss_pred ccCchhhHHHHH-hccc----CCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 100 EGPIVPCTHALL-AKWI----PPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 100 ~~~~~~~~~~~i-~e~~----~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
.+..+.+-.+.+ .|.- |++..+...+... ....+-.+.+.+++-.+.+.. ..|-..+|.....+..+..++..
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~-~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF-GFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-CCCCcchHHHHHHHHHHHHHHHH
Confidence 998887777654 3332 2222333333333 222233344445555555440 02447888888777777677666
Q ss_pred hhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhcC
Q psy3467 174 LYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLM-TELPTFMKQVLHF 252 (455)
Q Consensus 174 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~ 252 (455)
...+|+..+..+.++.. +. ....++.+.++|+++.+.++-.+.-...+.+. .|.|..- . +-
T Consensus 214 ~~W~ENyg~~~~~~~~~-~~--------------~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~--~~ 275 (354)
T PF05631_consen 214 KTWPENYGDTSSSSSLS-GS--------------FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P--DD 275 (354)
T ss_pred hcccccCCCcccccchH-HH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C--CC
Confidence 66677644322111111 11 11223667788999988888777777766655 4555543 2 12
Q ss_pred ccccchhhchhHHHHHHHHHHHHHHHHHH
Q psy3467 253 NIKENGTLSALPYLAMWIFSMFASFIADS 281 (455)
Q Consensus 253 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr 281 (455)
....-|++++.+..+..+|+-+..++..|
T Consensus 276 ~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 276 EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33457999999999999988887665543
No 126
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=2.3e-11 Score=111.83 Aligned_cols=71 Identities=10% Similarity=0.093 Sum_probs=61.9
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcccc
Q psy3467 217 SSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEKF 288 (455)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 288 (455)
|.+.+....+.+...+..+..+....|...++ .++|..|.|.+.+.+.+.|.++.++.|.++||.++|+.+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 33456777788888888888888888887777 789999999999999999999999999999999999763
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.22 E-value=3.9e-10 Score=109.12 Aligned_cols=137 Identities=20% Similarity=0.213 Sum_probs=106.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhc
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAK 113 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e 113 (455)
+.++..+.+.++..++.++.|++.||+| ..........+........++. .+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4567778889999999999999999999 2222222222222233334455 77788999999999888888888899
Q ss_pred ccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 114 WIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 114 ~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
..|+|+|+++.++++....+|..+++.+.+.+.++ .||++.|++.+.+.++..+..+++.+
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW---FGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999888 89999999988887775555554433
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.22 E-value=2.4e-10 Score=111.40 Aligned_cols=146 Identities=13% Similarity=0.125 Sum_probs=115.1
Q ss_pred ccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhh
Q psy3467 31 SFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPC 106 (455)
Q Consensus 31 ~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~ 106 (455)
+.+.+..+.|++.++..++..++.++.|+++||+| .......+..+........++. .+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778899999999999999999999999999 2222233333333334445566 7888899999998877788
Q ss_pred HHHHHhcccCCCcchhHHHH-HHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 107 THALLAKWIPPTERSRLGAF-VYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 107 ~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
...++.|.+|++.|+...+. ++....+|..++|.+.+++.+. .|||..|.+.+++.++..++.++..+++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~---~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS---IGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh---hCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999999887655 6677889999999999999998 8999999998888777666666665543
No 129
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.19 E-value=3.8e-10 Score=109.87 Aligned_cols=155 Identities=15% Similarity=0.029 Sum_probs=123.3
Q ss_pred hhcccCcc-cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhh
Q psy3467 24 RVHHKDGS-FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGL 98 (455)
Q Consensus 24 ~~~~~~~~-~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~ 98 (455)
.+|...++ +|.+..+.+++.+...++..++.++.+++.||.+ .......+..+........++. ...+..++.|+
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY 324 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 34444444 8899999999999999999999999999999877 2333333333333334445555 67778888999
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+.+...+...+++.|..|+|+|+++++++.....+|..+||.+.+.+.+. .|.+..++..+.+.++..++....+||
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 325 LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM---MTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH---hchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 88877788889999999999999999999999999999999999999998 899999988888777766777677776
Q ss_pred CCC
Q psy3467 179 EPE 181 (455)
Q Consensus 179 ~~~ 181 (455)
.++
T Consensus 402 ~~~ 404 (417)
T PRK10489 402 LRR 404 (417)
T ss_pred ccc
Confidence 544
No 130
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.18 E-value=9.2e-09 Score=97.20 Aligned_cols=145 Identities=22% Similarity=0.195 Sum_probs=115.6
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH-h---HHHHHHHHHHHHHHHHHhhh--hH-HHHHHHHHHhhccc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY-G---IGMLINSVFAFLVPVAAGHS--IL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~-G---~~l~~~~~~~~~~~~~~~~~--~~-~~~~~r~l~G~~~~ 101 (455)
.+.+|+|++++.-+.+.|.--.-+...++|+++||+ | ..+++..+..++....+..+ .. .+.++-.+.++|.|
T Consensus 53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~G 132 (498)
T COG3104 53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTG 132 (498)
T ss_pred cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccc
Confidence 334789999998899988888889999999999995 4 45555555555555444442 34 78888888889999
Q ss_pred CchhhHHHHHhcccCCC--cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 102 PIVPCTHALLAKWIPPT--ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
..-+...++++|.+|++ +|-...++++.+.++|+.++|.+.+++.+. .||...|-..++-..+ .++.+...+
T Consensus 133 l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~---~g~~~gF~~aavGm~~-gl~~f~~~~ 206 (498)
T COG3104 133 LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN---YGWHVGFGLAAVGMII-GLVIFLLGR 206 (498)
T ss_pred cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHH-HHHHHHHcc
Confidence 99999999999999865 578889999999999999999999999998 9999999887766555 333333333
No 131
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.17 E-value=1.8e-11 Score=116.45 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=45.4
Q ss_pred cHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeeecccC
Q psy3467 400 PWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVRVTSS 454 (455)
Q Consensus 400 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~~~p~ 454 (455)
+++++++++.+|.+.+.+++.+..+|.+.+|+|+|+++ +|+|.+ .|.+.++|+
T Consensus 184 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~ 236 (368)
T TIGR00903 184 EFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAI 236 (368)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHH
Confidence 57889999999999999999999999999999999976 678864 566665553
No 132
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.17 E-value=5.6e-10 Score=106.85 Aligned_cols=139 Identities=12% Similarity=0.012 Sum_probs=109.6
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhh--H-HHHHHHHHHhhc
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSI--L-ALSIIRFIQGLG 99 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~--~-~~~~~r~l~G~~ 99 (455)
+...+++|.++++.+++.+.+.++..++.++.|+++||+| ..........+........++ . .++...++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 3345668888889999999999999999999999999999 222222222222222222222 2 455667888888
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+...+....++.|.+|+|+|+++.++.+....+|..++|.+.+.+.+. .||++.|.+.+++.++
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE---IGFEYTFIVTGAFALT 373 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh---hchhhHHHHHHHHHHH
Confidence 8888888889999999999999999999999999999999999999988 8999999888776665
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.16 E-value=9e-10 Score=106.92 Aligned_cols=137 Identities=19% Similarity=0.176 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcc
Q psy3467 39 QGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKW 114 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~ 114 (455)
.+.+.++..++..++.+..|+++||+| .......+..+........++. .+++.+++.|++.+...+...+.+.|.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 466677778888899999999999999 2222222222233333333445 778899999999999999999999999
Q ss_pred cCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 115 IPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 115 ~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
.|+++|++.+++.+....+|..+||.+++.+.+. .||++.|++.+++.++..+..++..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN---YGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988 899999999988888766666554443
No 134
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.16 E-value=9.9e-10 Score=103.99 Aligned_cols=150 Identities=22% Similarity=0.290 Sum_probs=122.8
Q ss_pred HhhhhhcccCcc-cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H-HHH-HHHHHHHHHHHHHhhhhH-HHHHHH
Q psy3467 20 KLTRRVHHKDGS-FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I-GML-INSVFAFLVPVAAGHSIL-ALSIIR 93 (455)
Q Consensus 20 ~l~~~~~~~~~~-~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~-~l~-~~~~~~~~~~~~~~~~~~-~~~~~r 93 (455)
......+...++ +|.++.+.++..+...++..++.++.+++.||+| . .+. ...+..+........++. .+.+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 333444444444 4889999999999999999999999999999999 3 333 333333444444445556 888999
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
++.|++.+...+....++.|..|+|+|++.+++.+....+|..+++.+.+.+.+. .+|+..+.+.+++.++..+..
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~---~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT---GGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999987 899999999988887755544
No 135
>KOG2816|consensus
Probab=99.16 E-value=1e-09 Score=105.83 Aligned_cols=249 Identities=14% Similarity=0.117 Sum_probs=162.7
Q ss_pred HHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcc--cCchhhHHHHHhcccCCCcchh
Q psy3467 47 FYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGE--GPIVPCTHALLAKWIPPTERSR 122 (455)
Q Consensus 47 ~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~--~~~~~~~~~~i~e~~~~~~r~~ 122 (455)
.+...+.++..|.++||+| ..+......+.....+.....+++.+ +.|+.. +.......++++|....++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh---hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 6777899999999999999 44444445554444444334443333 444433 3356788899999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhccccc
Q psy3467 123 LGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLA 202 (455)
Q Consensus 123 ~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 202 (455)
.+++.+..+..+..++|.+++.+.+. .|--.+|.+..+..++..+...+++||+...+++..++.++....+ ...
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~---~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~--~~~ 223 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKF---LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGS--LDS 223 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCc--ccc
Confidence 99999999999999999999999998 8889999999999998888888999997554433210000000000 000
Q ss_pred CCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHH-HHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHH-HHHH
Q psy3467 203 GVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYET-LMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFAS-FIAD 280 (455)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g-~l~d 280 (455)
....+........-.+|..+.+++..+........ ..-..+.|++..+++++.+.+.+.+.......+++++.. .+..
T Consensus 224 ~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~ 303 (463)
T KOG2816|consen 224 SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSS 303 (463)
T ss_pred hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111111111233444444444443333322 121446777888999999999999999999999998877 6666
Q ss_pred HhhhcccccccchHHHHHHHHHHHHHHHHHHHH
Q psy3467 281 SMITSEKFSHTSTRKIINAFLYQVLSFGMIVSS 313 (455)
Q Consensus 281 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (455)
.++.|+. ...+...........+
T Consensus 304 ~l~~~~~----------i~lGl~~~~~~~~~~a 326 (463)
T KOG2816|consen 304 ILGEKRL----------ISLGLLSEFLQLLLFA 326 (463)
T ss_pred HHhhhhH----------hhHHHHHHHHHHHHHH
Confidence 7777643 5556655555555544
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.15 E-value=1.4e-09 Score=105.57 Aligned_cols=148 Identities=19% Similarity=0.091 Sum_probs=109.8
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHH-HHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcc
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGML-INSVFAFLVPVAAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~-~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~ 100 (455)
.|.+.++.|.++.+.+.+.+.+.++..++.++.|+++||+| ..+. ......+........++. .+.+..++.|++.
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 322 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFV 322 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 44555667999999999999999999999999999999999 2222 112122222222333444 6667778888888
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
+...+...+++.|.+|+++|++..++.+....+|..++|.+++.+.++. .+|+..++......++..+..++
T Consensus 323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG--RSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC--CchHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999999998751 34556666655555553444333
No 137
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.14 E-value=9.9e-10 Score=108.50 Aligned_cols=143 Identities=10% Similarity=0.067 Sum_probs=103.9
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH--HHHHhhhhH-HHHHHHHHHhhccc
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV--PVAAGHSIL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~--~~~~~~~~~-~~~~~r~l~G~~~~ 101 (455)
+++++|.|..+.++..+...++..++.++.|+++||+| ............. ......++. ...+.+++.|+...
T Consensus 285 l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 364 (467)
T PRK09556 285 AFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVF 364 (467)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999999 2211111111111 111222344 56678888886544
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHH-HHHHHHHHHHHhHh------------cccCCCCchhHHHhhHHHHHH
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQF-GTVFSLPLSGLLSE------------YGFAGGWPSIFYVFGLVGAVW 168 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~-G~~~g~~i~~~l~~------------~~~~~~wr~~f~~~~~~~~~~ 168 (455)
...........|.+|+|+||.+.|+.+...++ |..++|.+.|.+.+ . .+|+..|++.++..++.
T Consensus 365 ~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~---~~~~~~f~~~~~~~~~~ 441 (467)
T PRK09556 365 GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTL---TGWAGTFAALDIAAIGC 441 (467)
T ss_pred hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccc---cChHHHHHHHHHHHHHH
Confidence 34334446777999999999999999988886 77999999999988 3 68999999887766664
Q ss_pred HHHhh
Q psy3467 169 SVAFL 173 (455)
Q Consensus 169 ~i~~~ 173 (455)
.+..+
T Consensus 442 ~~~~~ 446 (467)
T PRK09556 442 ICLMA 446 (467)
T ss_pred HHHHH
Confidence 44433
No 138
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.14 E-value=1.8e-09 Score=104.27 Aligned_cols=145 Identities=11% Similarity=0.075 Sum_probs=109.9
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
++++|.++.+.+++.+...++..++.++.|+++||+| ...................++. .+++.|++.+++.+...
T Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILG 323 (393)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999988888888899999999999999 2222211212222222233455 67788998888877777
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+....+..|..| ++|+++.++++...++|..++|.+++.+.+. .+|+..|++.+++.++..+ ..++.||
T Consensus 324 ~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~---~g~~~~~~~~~~~~~~~~~-~~~~~~~ 392 (393)
T PRK15011 324 GIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEI---WNYHAVFWFALVMIIATLF-CLLRIKD 392 (393)
T ss_pred HHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHH-HHHhhcC
Confidence 777888899987 5699999999999999999999999999998 8999999887777766444 4444454
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.13 E-value=2.5e-09 Score=102.79 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=108.1
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-HH--HHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-IG--MLINSVFAFLVPVAAGHSILALSIIRFIQGLGEG 101 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~~--l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 101 (455)
+|...++.|.++++.++..+...++..+++++.|+++||+| .. .....+..+..... ..........++.|++..
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--LSQAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHH
Confidence 34444556888889999999999999999999999999999 22 21222222211111 122244456778888777
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
...|...+.+.|..|+++++...+......++|..+||.+++.+.++ .+|++.|.+.+.+.++..+.
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN---YSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHH
Confidence 78899999999999988888888888889999999999999999998 89999999887777664433
No 140
>PRK12382 putative transporter; Provisional
Probab=99.12 E-value=1.6e-09 Score=104.52 Aligned_cols=136 Identities=20% Similarity=0.237 Sum_probs=107.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhc
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAK 113 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e 113 (455)
+.++..+.+.++..+++++.|++.||+| .......+..+........++. .+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 250 MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3566677888888999999999999999 2222222323333333334555 77788999999998888888899999
Q ss_pred ccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhc
Q psy3467 114 WIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYC 176 (455)
Q Consensus 114 ~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~ 176 (455)
.+|+|+|+++.++.+....+|..++|.+.+.+.++ .||++.|.+.+.+.++..+..+++.
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 330 RVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS---FGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998 8999999998888777665555443
No 141
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.11 E-value=8.8e-10 Score=112.54 Aligned_cols=138 Identities=12% Similarity=-0.051 Sum_probs=105.5
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcc
Q psy3467 39 QGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKW 114 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~ 114 (455)
..+...+..++..++.++.|.++||+| ..+....+..++.....+.++. .+++.+++.|++.+..++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778999999999999999999 3333333334444444444555 777788888888888899999999999
Q ss_pred cCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCC
Q psy3467 115 IPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPE 181 (455)
Q Consensus 115 ~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~ 181 (455)
+|.++|++++|+......+|.+++|.+++.+.+. +.+.+|++.+++.++..++ ..++||+..
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll-~~~LPET~~ 738 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLL-ALKLPDTRG 738 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHH-HHhCCCCcc
Confidence 9999999999999999999999999999988764 4566777777766664444 445687643
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.08 E-value=7.4e-09 Score=99.88 Aligned_cols=145 Identities=14% Similarity=0.024 Sum_probs=113.6
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHH-HHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLV-PVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~-~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
.++.|.+..+.+++.+...++..+++++.|+++||+| .......+..... ......++. .+++..++.|++.+...
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 312 (390)
T PRK03545 233 QQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIG 312 (390)
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcch
Confidence 4557889999999999999999999999999999999 2222222222221 122233445 77778889999887777
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
+.....+.|..| ++|++++++++....+|..+||.+++.+.++ .|+|..|++.+.+.++..+......+
T Consensus 313 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 313 LAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH---LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 778888888876 7899999999999999999999999999998 99999999998888776666555543
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.07 E-value=3.6e-09 Score=103.50 Aligned_cols=147 Identities=12% Similarity=0.021 Sum_probs=104.6
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------H-HHHHHHHH-HHHHHHHHhhhhH-HHHHHHHHHhhcc
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------I-GMLINSVF-AFLVPVAAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~-~l~~~~~~-~~~~~~~~~~~~~-~~~~~r~l~G~~~ 100 (455)
+++|.+..+.++..+.+.++..++.++.|+++||+. . ........ ...........+. ......+..|++.
T Consensus 272 ~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 351 (434)
T PRK11663 272 ETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFV 351 (434)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999992 1 11111111 1111111111222 3334445555543
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
............|.+|+++|++..++.+....+|..++|.+.+.+.+. .||+..|+..+++.++..+..+.+.+++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 352 FGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI---WHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred hhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 323333456778999999999999999999999999999999999998 8999999999888877666555555443
No 144
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.05 E-value=2.6e-09 Score=105.75 Aligned_cols=153 Identities=12% Similarity=-0.014 Sum_probs=110.2
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH-----hhh------hH-HH
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA-----GHS------IL-AL 89 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~-----~~~------~~-~~ 89 (455)
.+...+++|.+..+.++......++..++.++.|+++||+| .......+..+...... ..+ +. .+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 34455667888888899999999999999999999999999 22222222222211111 111 23 23
Q ss_pred HHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHH
Q psy3467 90 SIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 90 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~ 169 (455)
....+..+.......+....++.|.+|+++|+++.++......+|..++|.+.+.+.++ .+|++.|++.+.++++..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~ 463 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES---IGVGGVFIFFGGLNVLGL 463 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccceehhHHHHHHHHH
Confidence 33333333222334466677889999999999999999999999999999999999887 899999999988888877
Q ss_pred HHhhhhcccCC
Q psy3467 170 VAFLLYCYEEP 180 (455)
Q Consensus 170 i~~~~~~~e~~ 180 (455)
+..+++.||++
T Consensus 464 i~~~~~~~~~~ 474 (481)
T TIGR00879 464 IFVYFFLPETK 474 (481)
T ss_pred HHHheecccCC
Confidence 77777777654
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.04 E-value=2.6e-09 Score=106.55 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=100.0
Q ss_pred hcccC-cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH--hhhhH-HHHHHHHHHh
Q psy3467 25 VHHKD-GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA--GHSIL-ALSIIRFIQG 97 (455)
Q Consensus 25 ~~~~~-~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~--~~~~~-~~~~~r~l~G 97 (455)
+|... +++|.+..+.+++.+...++..++.++.|+++||+| .......+..+...... ...+. .+.+..++.+
T Consensus 298 lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (496)
T PRK03893 298 LPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQ 377 (496)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 34443 478999999999999999999999999999999999 22222222222211111 11222 3444455544
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
.......+....++.|.+|+++|++.+++.+....+|..+||.+++.+.+. .||+..+...+...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~---~g~~~~~~~~~~~~ 442 (496)
T PRK03893 378 MLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR---LDLGTALASLSFSL 442 (496)
T ss_pred HHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc---CChHHHHHHHHHHH
Confidence 433344567778899999999999999999999999999999999999998 89998886655443
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.04 E-value=7e-09 Score=99.69 Aligned_cols=144 Identities=8% Similarity=-0.040 Sum_probs=115.2
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
.....+...+|.|.++.+.|++.+...++..+..++.+++.||+| ...++.....+......+.++. .+++.++++
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHH
Confidence 333444455678999999999999999999999999999999999 2333333333333344556676 888899999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHH
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~ 169 (455)
|++.+...+....++.+. |+++|++..++++ ....+|..+++.++|.+.++ .|+ ..|+..+.++++..
T Consensus 304 g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~---~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 304 CGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT---LGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccH-HHHHHHHHHHHHHH
Confidence 999999999999999998 9899999999986 57889999999999999998 785 66777777776543
No 147
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=9.1e-09 Score=98.60 Aligned_cols=140 Identities=12% Similarity=0.120 Sum_probs=108.1
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H-HHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I-GMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~-~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
.+++|.++.+.+++.+........+.++.|++.||+| . ..................++. .+.+.+++.|++.+...
T Consensus 227 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 306 (375)
T TIGR00899 227 IHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILA 306 (375)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568889999999988888888889999999999999 2 222222222222222233445 67778899999888888
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
+....++.|..| ++|+++.++.+....+|..++|.+++.+.+. .||+..|++.+++.++..+..
T Consensus 307 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~---~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 307 GIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAER---WSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHH
Confidence 888899999887 4667999999999999999999999999988 899999999888777644443
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.02 E-value=1.2e-08 Score=98.33 Aligned_cols=154 Identities=14% Similarity=0.038 Sum_probs=110.8
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHhhcc
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA-GHSILALSIIRFIQGLGE 100 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~ 100 (455)
+|...+++|.+..+.+...+.+.++..++.+..|++.||+| .......+..+...... ..++... ..-++.|++.
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~ 306 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGL 306 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhc
Confidence 33444457899999999999999999999999999999999 22222222222211111 1222211 1234668888
Q ss_pred cCchhhHHHHHhcccC-CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCC-CCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 101 GPIVPCTHALLAKWIP-PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAG-GWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~-~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+...+.......|..+ +++|++..+..+....++..++|.+.+++.+. . +|+..|.+.+...++..+....+.||
T Consensus 307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI---SGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888777778775 57899999999999999999999999999987 4 47888888777777766666777777
Q ss_pred CCCC
Q psy3467 179 EPEA 182 (455)
Q Consensus 179 ~~~~ 182 (455)
++.+
T Consensus 384 ~~~~ 387 (393)
T PRK09705 384 RFPQ 387 (393)
T ss_pred cccc
Confidence 6543
No 149
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.01 E-value=9e-10 Score=106.88 Aligned_cols=67 Identities=12% Similarity=-0.026 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+....+.+++.+..........| .+++++|++..+.++..+.+.+++.+++++.|++.||+|||+.
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~ 75 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW 75 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH
Confidence 455556666666777777777777 5566699999999999999999999999999999999999987
No 150
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.99 E-value=8.7e-09 Score=102.31 Aligned_cols=153 Identities=10% Similarity=-0.026 Sum_probs=105.3
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH---hhhh--HHHHHHHHHHh
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA---GHSI--LALSIIRFIQG 97 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~---~~~~--~~~~~~r~l~G 97 (455)
|.+.++.|.+.....+......+...++.++.|+++||+| ..+.+..+..+...... ..+. ......-++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 5555667888777778888888899999999999999999 22222222222222111 1111 12222333333
Q ss_pred hcccC-chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH------hcccCCCCchhHHHhhHHHHHHHH
Q psy3467 98 LGEGP-IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS------EYGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 98 ~~~~~-~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~------~~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
.+.+. ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+. +. .+|++.|++.++++++..+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 451 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH---FHNGFSYWIYGCMGVLAAL 451 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh---ccCccHHHHHHHHHHHHHH
Confidence 33332 34678899999999999999999999999999998876665544 34 7899999998888777777
Q ss_pred HhhhhcccCCC
Q psy3467 171 AFLLYCYEEPE 181 (455)
Q Consensus 171 ~~~~~~~e~~~ 181 (455)
+.+++.||+++
T Consensus 452 ~~~~~~~e~~~ 462 (479)
T PRK10077 452 FMWKFVPETKG 462 (479)
T ss_pred HHHhccccCCC
Confidence 77777777643
No 151
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.99 E-value=8.7e-09 Score=101.36 Aligned_cols=150 Identities=10% Similarity=0.048 Sum_probs=101.2
Q ss_pred hhhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHH--h-H--H-HHHHHHHHHHHHH--HHhhhhH-HHHHH
Q psy3467 23 RRVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKY--G-I--G-MLINSVFAFLVPV--AAGHSIL-ALSII 92 (455)
Q Consensus 23 ~~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~--G-~--~-l~~~~~~~~~~~~--~~~~~~~-~~~~~ 92 (455)
..+|.. +++.|.+..+.++....+.++..++.++.|+++||+ | . . .....+..+.... ....++. ...+.
T Consensus 274 ~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
T PRK11273 274 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMAC 353 (452)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHH
Confidence 344443 344788888999999999999999999999999999 4 1 1 1111221111111 1112222 34445
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHH-HHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTV-FSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~-~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
.++.|.+..........+..|.+|+++||++.++.+....+|.. .+|.+.+.+.++ .||+..|++.+..+++..+.
T Consensus 354 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~---~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 354 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH---hcchHHHHHHHHHHHHHHHH
Confidence 55555543333333445678999999999999999988888765 479999999998 89999999888777765555
Q ss_pred hhhh
Q psy3467 172 FLLY 175 (455)
Q Consensus 172 ~~~~ 175 (455)
...+
T Consensus 431 ~~~~ 434 (452)
T PRK11273 431 LIVV 434 (452)
T ss_pred HHHH
Confidence 4433
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.95 E-value=1.7e-07 Score=92.94 Aligned_cols=147 Identities=18% Similarity=0.202 Sum_probs=106.6
Q ss_pred CcccccccchhhHHHH-HHHHHHHHhhhhhHHHHhHHh--HHHHHHHHH-HH---HHHHHHhh-hhH-HHHHHHHHHhhc
Q psy3467 29 DGSFIWTTAEQGYVLS-SFFYGYVLTQIPFGILAKKYG--IGMLINSVF-AF---LVPVAAGH-SIL-ALSIIRFIQGLG 99 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s-~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~-~~---~~~~~~~~-~~~-~~~~~r~l~G~~ 99 (455)
.+++|.+.++.+++.+ ...++..++.++.|+++||+| ..+....+. .+ ........ ++. .+.+.-+++.++
T Consensus 250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~ 329 (491)
T PRK11010 250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC 329 (491)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 3468999999999975 666899999999999999999 222211111 11 11111222 233 444456665555
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
.+...+...++..|..+++.+++..++.+...++|..+++.++|.+.+. .||+..|.+.++++++..+... .++++
T Consensus 330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~---~G~~~~f~~~~~~~l~~l~~~~-~~~~~ 405 (491)
T PRK11010 330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA---HGWPTFYLFSVAAAVPGLLLLL-VCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHH-HHHhc
Confidence 5656677788999999999999999999999999999998899999998 8999999988888877544444 34543
No 153
>PRK03699 putative transporter; Provisional
Probab=98.95 E-value=1.7e-08 Score=97.47 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=109.4
Q ss_pred hcccC-cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhc
Q psy3467 25 VHHKD-GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 25 ~~~~~-~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~ 99 (455)
+|... +++|.|..+.+++.+.+.++..++.+..|+++||+| .......+..+........++. .+.+..++.|++
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 307 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFF 307 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 34443 567999999999999999999999999999999999 2222222222222222233444 666677888988
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
.+...+...+...|..| +++++..+.......+|..++|.+.+.+.+. .|++..++..+++.++..+..
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 308 SSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH---FGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH---hCchhhhhhhHHHHHHHHHHH
Confidence 88788888888888775 5677888899889999999999999999998 899999998888777654443
No 154
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.93 E-value=2.9e-08 Score=95.54 Aligned_cols=141 Identities=14% Similarity=0.092 Sum_probs=104.3
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H---HHHH---HHHH----HHHHHHHHhhhhH-HHHHHHHHH
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I---GMLI---NSVF----AFLVPVAAGHSIL-ALSIIRFIQ 96 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~---~l~~---~~~~----~~~~~~~~~~~~~-~~~~~r~l~ 96 (455)
++++|.++.+.+++.+...++..++.++.|+++||+| . .... ..+. ..........++. ..+....+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALG 322 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 4557888999999999999999999999999999999 2 1111 1111 1111111112233 444444444
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC-CchhHHHhhHHHHHHHHHhh
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG-WPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~-wr~~f~~~~~~~~~~~i~~~ 173 (455)
+.+.+ ..+...+++.|.+|+|+|+++.++.+....+|..++|.+.+.+.+. .| |++.|++.++..++..+..+
T Consensus 323 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 323 FFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT---TGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred Hhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC---CCchhHHHHHHHHHHHHHHHHHH
Confidence 55544 7899999999999999999999999999999999999999999887 77 99999988877766554443
No 155
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.91 E-value=4.6e-08 Score=94.74 Aligned_cols=145 Identities=14% Similarity=0.175 Sum_probs=106.7
Q ss_pred hhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHH-HH-HHHHHH---HHHHHH--hhhhH-HHHHHH
Q psy3467 24 RVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGM-LI-NSVFAF---LVPVAA--GHSIL-ALSIIR 93 (455)
Q Consensus 24 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l-~~-~~~~~~---~~~~~~--~~~~~-~~~~~r 93 (455)
..|...+++|.+..+.+++.+...++..++.+..|+++||+| ..+ .. .....+ ...... ..++. ...+..
T Consensus 244 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR00897 244 FLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIA 323 (402)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHH
Confidence 445555678999999999999999999999999999999999 211 11 111111 111111 12234 566778
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
++.|++.+...+ ....+.|.. |++|++++++.+....+|..++|.+++.+.+. .||+..+++.+++.++..++..
T Consensus 324 ~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~---~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 324 IALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF---FGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHHHHHHHHHHHH
Confidence 888888776544 455667764 57899999999999999999999999999998 8999999998887766554443
No 156
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.91 E-value=1.8e-08 Score=97.02 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=103.6
Q ss_pred hcccC-cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H-HHHHHHHHHHHH--HHHHh--hhhH-HHHHHHHH
Q psy3467 25 VHHKD-GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I-GMLINSVFAFLV--PVAAG--HSIL-ALSIIRFI 95 (455)
Q Consensus 25 ~~~~~-~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~-~l~~~~~~~~~~--~~~~~--~~~~-~~~~~r~l 95 (455)
+|... +++|.++.+.+...+...++..++.++.|+++||+| . ......+..+.. ..... .++. .+....++
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 34433 567889999999999999999999999999999999 2 221221111111 11111 1333 66677888
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHH-HHhhHHHHHHHHHHHHHHhHhcccCCC-CchhHHHhhHHHH
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAF-VYAGAQFGTVFSLPLSGLLSEYGFAGG-WPSIFYVFGLVGA 166 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~i~~~l~~~~~~~~-wr~~f~~~~~~~~ 166 (455)
.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++|.+++.+.++ .| |+..++......+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~---~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM---TGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH---cCcchhHHHHHHHHHH
Confidence 8998888889999999999999999999998 4566778999999999999987 66 8887776655443
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.86 E-value=4.4e-08 Score=96.01 Aligned_cols=148 Identities=13% Similarity=0.049 Sum_probs=102.6
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHH---HHHHHHHHHHHh--hhhH-HHHHHHHHHhhcc
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLIN---SVFAFLVPVAAG--HSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~---~~~~~~~~~~~~--~~~~-~~~~~r~l~G~~~ 100 (455)
++.|.+..+.++..+.+.++..++.+..|+++||+| ...... ....+....... ..+. .....-+..|.+.
T Consensus 280 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 359 (438)
T TIGR00712 280 EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLI 359 (438)
T ss_pred HccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 346888999999999999999999999999999995 111111 111111111111 1122 2233344555543
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHH-HHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFG-TVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G-~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
............|.+|+++|+++.|+.+....+| ..++|.+.+.+.++ .||...+++.....++..+..++++||+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 360 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3222333356789999999999999998877776 57899999999998 8999999988887777777777888875
Q ss_pred C
Q psy3467 180 P 180 (455)
Q Consensus 180 ~ 180 (455)
+
T Consensus 437 ~ 437 (438)
T TIGR00712 437 K 437 (438)
T ss_pred c
Confidence 4
No 158
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.86 E-value=9.9e-08 Score=93.27 Aligned_cols=148 Identities=14% Similarity=0.150 Sum_probs=115.9
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H---HHHHHHHHH-HHHHHHHh--------hhhH-HHHHHH
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I---GMLINSVFA-FLVPVAAG--------HSIL-ALSIIR 93 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~---~l~~~~~~~-~~~~~~~~--------~~~~-~~~~~r 93 (455)
..+++|++.++...+.-+..+...+|++++|++.||+| . .+....+.. +....... .++. .+.+.-
T Consensus 308 a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a 387 (477)
T PF11700_consen 308 ATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA 387 (477)
T ss_pred HHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH
Confidence 35689999999999999999999999999999999999 2 222222221 22222221 2333 888899
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
++.|+..|..++...++.+|+.|+++.+..+|++....-....+||++-+.+.+.. .+-|+.+....++.++..++.
T Consensus 388 ~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t--g~~r~g~~~l~~lf~~gl~ll- 464 (477)
T PF11700_consen 388 VLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT--GSQRYGFLFLLVLFLIGLILL- 464 (477)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchhHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999999999999999999999998872 347888887777766644443
Q ss_pred hhccc
Q psy3467 174 LYCYE 178 (455)
Q Consensus 174 ~~~~e 178 (455)
+.+++
T Consensus 465 ~~v~~ 469 (477)
T PF11700_consen 465 FFVDV 469 (477)
T ss_pred hhccc
Confidence 44443
No 159
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.85 E-value=6.4e-09 Score=99.32 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.++...+..+..+..........|.++++++|.|+.+.+++.+...+++.+++++.|++.||+|||+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 69 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT 69 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence 34566677777777777788888987777799999999999999999999999999999999999976
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.83 E-value=6.2e-08 Score=93.77 Aligned_cols=129 Identities=16% Similarity=0.160 Sum_probs=99.1
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHH-HHHHH-HHHHHHHHhhhhH-HHHHHHHHHhhcccCc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGML-INSVF-AFLVPVAAGHSIL-ALSIIRFIQGLGEGPI 103 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~-~~~~~-~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~ 103 (455)
.+++|.+..+.+++.+...++..++.++.|+++||+| ..+. ..... ..........++. .+.+..++.|+..+..
T Consensus 266 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (405)
T TIGR00891 266 KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGI 345 (405)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccc
Confidence 3467899999999999999999999999999999999 2221 21111 1111112222334 5566667777777777
Q ss_pred hhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC-CchhHHH
Q psy3467 104 VPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG-WPSIFYV 160 (455)
Q Consensus 104 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~-wr~~f~~ 160 (455)
.+....++.|.+|+++|++++++.+....+|..++|.+.+.+.++ .| |+..+..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~---~g~~~~~~~~ 400 (405)
T TIGR00891 346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR---LDEYGTALAS 400 (405)
T ss_pred hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh---ccccchhHHh
Confidence 788889999999999999999999999999999999999999998 67 7776654
No 161
>KOG4686|consensus
Probab=98.83 E-value=4.8e-08 Score=85.07 Aligned_cols=148 Identities=18% Similarity=0.234 Sum_probs=105.8
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCch
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 104 (455)
+++.+|+|+...+.+.+....-.++.+++.|.++||+| ..+....+..+..-..-+.+.+.-..+-.+.|+..+...
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllA 370 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLA 370 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHH
Confidence 47789999999999999999999999999999999999 222222222222111111111244566677888887776
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHh-hHHHHHHHHHhhhhc
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVF-GLVGAVWSVAFLLYC 176 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~-~~~~~~~~i~~~~~~ 176 (455)
......++...|+++.|++.+..+...++|..+.|++++.+.+..+...|--.|.+. +.+++. .+...+.+
T Consensus 371 cslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~-svgil~~~ 442 (459)
T KOG4686|consen 371 CSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALT-SVGILFYL 442 (459)
T ss_pred HHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHH-HHHHHhhe
Confidence 767788899999999999999999999999999999999999874333455555543 334444 33334443
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.81 E-value=1.1e-07 Score=94.08 Aligned_cols=146 Identities=16% Similarity=0.101 Sum_probs=118.7
Q ss_pred hhccc-CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhh
Q psy3467 24 RVHHK-DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGL 98 (455)
Q Consensus 24 ~~~~~-~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~ 98 (455)
.+|.+ ++++|.+....|++.+.+.+|..+|++..+.+.+|++ ..........+.....++.++. ..++.-++.|+
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34444 3568899999999999999999999999999999988 3333334444444555566666 77778899999
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
+.....+...+.+.+..|++.||+.+++++.....+..+|..+.|.+.+. .|-+..+.+.++..++..++.
T Consensus 320 ~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~---~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH---FGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHH
Confidence 99988888999999999999999999999999999999999999999998 899999887776555544443
No 163
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.79 E-value=1.1e-07 Score=92.90 Aligned_cols=132 Identities=14% Similarity=0.033 Sum_probs=88.6
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH-hh-hhH-HHHHHHHHHhh
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA-GH-SIL-ALSIIRFIQGL 98 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~-~~-~~~-~~~~~r~l~G~ 98 (455)
+|...++.|.++.+.+...+...++..++.++.|+++||+| .......+..+...... .. +.. .+....+..+.
T Consensus 254 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (426)
T PRK12307 254 LPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMA 333 (426)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 34444456888889999999999999999999999999999 21111111111111111 11 122 22222222223
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHH
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFY 159 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~ 159 (455)
+.....+....++.|.+|+++|++++|+......+|..++|.+.+.+.+. .|.....+
T Consensus 334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~---~g~~~~~~ 391 (426)
T PRK12307 334 TNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT---MGLGAALT 391 (426)
T ss_pred hcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc---ccHHHHHH
Confidence 33333456667889999999999999999999999999999999999887 66554433
No 164
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.75 E-value=4.5e-07 Score=84.77 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=112.4
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHH-HHHHHhhhhH-HHHHHHHHHhhcc
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFL-VPVAAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~-~~~~~~~~~~-~~~~~r~l~G~~~ 100 (455)
|.+++..|.|.+.++++.-.|.++..+|+.+.|+++|| + .......+..+. ..+....++. ..++.-++-|++.
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~ 314 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF 314 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 34456678899999999999999999999999999999 7 222221222222 2222333444 6666666788887
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
....+....-+++ ..||.+..+.+++....++|..+|..+++.+.++ .|++...+..+++.++..++.+...+
T Consensus 315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~---~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA---LGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred hhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777777777 4468999999999999999999999999999999 99999999999988886666655433
No 165
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.74 E-value=3e-07 Score=88.43 Aligned_cols=135 Identities=19% Similarity=0.104 Sum_probs=102.5
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCc
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPI 103 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~ 103 (455)
..+|.|.++.+.|.+.+...++..+..++.|++.||+| ..........+........++. .+++..++.|++.+..
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 310 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 33568889999999999999999999999999999999 2222222222222333445666 7788999999999988
Q ss_pred hhhHHHHHhcccCCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 104 VPCTHALLAKWIPPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 104 ~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+....++.+. +++++++..+... ....+|..+||.++|.+.+. .|+ ..++..+.+.++
T Consensus 311 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~---~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 311 HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH---LGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccH-HHHHHHHHHHHH
Confidence 88888888886 5677788888886 55678889999999999998 776 466666655544
No 166
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.74 E-value=4.3e-07 Score=87.59 Aligned_cols=142 Identities=11% Similarity=-0.018 Sum_probs=102.0
Q ss_pred hcccCcccccccchhhHHHHHHHH-HHHHhhhhhHHHHhHHh--HHHHHHHHHH-H-HHHHH--Hh---hhhH-HHHHHH
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFY-GYVLTQIPFGILAKKYG--IGMLINSVFA-F-LVPVA--AG---HSIL-ALSIIR 93 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l-~~~~~~~~~g~l~dr~G--~~l~~~~~~~-~-~~~~~--~~---~~~~-~~~~~r 93 (455)
.+...+|.|.++++.|++.+.... ...++.++.|++.||+| ..+....+.. . ..... .. ..+. ......
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 344455679999999999888764 66778899999999999 2222111111 1 11111 10 1122 344555
Q ss_pred HHHhhcccCchhhHHHHHhcccCC-CcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPP-TERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWS 169 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~ 169 (455)
.+.+++.+...+...+.+.+..++ +++++.+++.+...++|..++|.+++.+.+. .|++..|+..+.+.++..
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~---~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR---FGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHH
Confidence 666777777778888888788776 7899999999999999999999999999998 899999988777666543
No 167
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.73 E-value=1.8e-07 Score=89.10 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=98.6
Q ss_pred cccCcc-cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhh-hH-HHHHHHHHHhhc
Q psy3467 26 HHKDGS-FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHS-IL-ALSIIRFIQGLG 99 (455)
Q Consensus 26 ~~~~~~-~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~-~~-~~~~~r~l~G~~ 99 (455)
|...++ +|.++.+.+++.+...++..++.++.+++.||+| ..........+........+ +. .+.+..++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 344333 7889999999999999999999999999999999 22222222222222333333 25 778889999999
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
.+...+...+++.|..|+|+|++..++.+....+|..++|.+++.+.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998775
No 168
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.70 E-value=2.9e-07 Score=85.30 Aligned_cols=148 Identities=12% Similarity=0.103 Sum_probs=115.4
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
.+++|++.++..++.-...+...+|+++.|++.||+| +.+.+..+..+.+....+.... .+.++-.+.|...|..+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 4589999999999999999999999999999999999 3333333333333333333333 78888899999999999
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
..+.++.++..|++|-++.+|+++.....+..+||.+-+.+.+.. .+-|..+....++..+ .++.+...|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT--g~~r~g~~~i~vll~i-Gl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT--GSSRAGVLSIIVLLLI-GLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh--cchhhHHHHHHHHHHh-hHhhEEeecCC
Confidence 999999999999999999999999999999999999999988752 4567766655554444 34444455543
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.70 E-value=4e-07 Score=89.28 Aligned_cols=114 Identities=16% Similarity=0.095 Sum_probs=87.6
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh-hhH-HHHHHHHHHhhcccCchhhHHH
Q psy3467 35 TTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH-SIL-ALSIIRFIQGLGEGPIVPCTHA 109 (455)
Q Consensus 35 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~-~~~-~~~~~r~l~G~~~~~~~~~~~~ 109 (455)
++.+.+++.++..++..++.+++++++||+| ....+..+..+........ ++. .+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556788888889999999999999999999 2222222222222222222 334 6677788899999989999999
Q ss_pred HHhcccC-------CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 110 LLAKWIP-------PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 110 ~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
+++|..| ++++|...++.+....+|..+++.+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 45689999999999999999999999999876
No 170
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.70 E-value=5.3e-07 Score=87.18 Aligned_cols=140 Identities=10% Similarity=0.120 Sum_probs=106.3
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhH
Q psy3467 32 FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCT 107 (455)
Q Consensus 32 ~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~ 107 (455)
.+.+..+.|.+.++..+...++.+..|++.||+| ...+...+..+........++. .++..++++|++........
T Consensus 249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667899999999999999999999999999 2323233233322232334455 77888999999877666667
Q ss_pred HHHHhcccCCCcchhHHHH-HHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 108 HALLAKWIPPTERSRLGAF-VYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 108 ~~~i~e~~~~~~r~~~~~~-~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
..+..|..+++.|+...+. .+....+|..+++.++|.+.+. .||+..|.+.+++.++..++..+
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~---~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS---IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh---cccHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888888877666 6788999999999999999998 89999999988888775555433
No 171
>PRK09952 shikimate transporter; Provisional
Probab=98.70 E-value=7.1e-07 Score=87.41 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=99.5
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH---HHH-hhhhH-HHHHHHHHHhhcc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP---VAA-GHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~---~~~-~~~~~-~~~~~r~l~G~~~ 100 (455)
++++|.++.....+..+..+...++.++.|+++||+| .......+..+... ... ..++. .+++..++.|++.
T Consensus 278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 4567777776666666667777888999999999999 22222111111111 111 11223 4445567778887
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
+...+...+++.|.+|+|.|+...++.. .+..+|..++|.+.+.+.+... .+|+..+...++..++..+.. +.++|+
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~-~~~~~~ 435 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTA-LLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHH-HHcccc
Confidence 7778888999999999999998888854 4455899999999999977410 358888887777766644444 445653
No 172
>TIGR00895 2A0115 benzoate transport.
Probab=98.69 E-value=1.8e-07 Score=90.28 Aligned_cols=121 Identities=20% Similarity=0.163 Sum_probs=96.1
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H-HHHHHHHHHHHHH-HHHhhhhH-HHHHHHHHHhhcc
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I-GMLINSVFAFLVP-VAAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~-~l~~~~~~~~~~~-~~~~~~~~-~~~~~r~l~G~~~ 100 (455)
.|...+++|.+..+.++..+...++..++.++.|+++||+| . ......+..+... .....++. ..++..++.|++.
T Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (398)
T TIGR00895 273 LPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFV 352 (398)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 44556678889999999999999999999999999999999 2 2222222222111 11112344 6778889999999
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
+...+...+++.|.+|+++|+++.++......+|..++|.++|.+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 353 NGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999999999999999999999999875
No 173
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.69 E-value=2.1e-07 Score=89.08 Aligned_cols=127 Identities=14% Similarity=0.095 Sum_probs=95.9
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---H---HHHHHHHHHHHHHHHHh--hhhH-HHHHHHHHHhhc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---I---GMLINSVFAFLVPVAAG--HSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~---~l~~~~~~~~~~~~~~~--~~~~-~~~~~r~l~G~~ 99 (455)
.+++|.++.+.++..+.+.++..++.++.|+++||.+ . ................. ..+. ...+..++.|+.
T Consensus 244 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 323 (379)
T TIGR00881 244 TQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFL 323 (379)
T ss_pred HHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999864 1 11111111111111111 2233 556667777776
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhH
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIF 158 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f 158 (455)
.....+....+..|..|+++|+++.++.+....+|..++|.+.+.+.+. .|||+.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~f 379 (379)
T TIGR00881 324 VYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG---FGWAGAF 379 (379)
T ss_pred HhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh---hcccccC
Confidence 6666667778899999999999999999999999999999999999998 8998764
No 174
>PRK10504 putative transporter; Provisional
Probab=98.69 E-value=2.3e-07 Score=91.89 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=91.4
Q ss_pred ccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh---hhhH-HHHHHHHHHhhcccCc
Q psy3467 31 SFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG---HSIL-ALSIIRFIQGLGEGPI 103 (455)
Q Consensus 31 ~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~---~~~~-~~~~~r~l~G~~~~~~ 103 (455)
.+|.++.+.++......++..++.++.|+++||+| ....+..+..+....... .++. .+.+.-++.|++.+..
T Consensus 291 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (471)
T PRK10504 291 GLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTR 370 (471)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHH
Confidence 46888899999999999999999999999999999 222222222222221111 1223 4455677888888888
Q ss_pred hhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 104 VPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 104 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
.+....++.+..|+|+|+.+.++.+....+|..+|+.+++.+.+.
T Consensus 371 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 371 FSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999988765
No 175
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.68 E-value=1.8e-07 Score=92.50 Aligned_cols=140 Identities=11% Similarity=0.039 Sum_probs=90.2
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H-------HH--HHHHHHHHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I-------GM--LINSVFAFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~-------~l--~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
.+++|.+..+.+.+.+++.++..++.++.|+++||+| . .. ....+..+........++. ..++.-++.+
T Consensus 280 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~ 359 (476)
T PLN00028 280 YDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFS 359 (476)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999987 1 11 1111111111222223333 3344444555
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
++.+...+...+++.|.. +++|+...++...+..+|..++|.+.+ .... .+|+..|++.+++.++..++.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~---~~y~~~f~~~~~~~~i~~~~~~ 430 (476)
T PLN00028 360 IFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSS---YSTETGISLMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCC---ccHhhHHHHHHHHHHHHHHHHH
Confidence 544444444555566654 578999999998877777777776543 1122 5799999998877777544443
No 176
>PRK10054 putative transporter; Provisional
Probab=98.68 E-value=3.7e-07 Score=88.13 Aligned_cols=147 Identities=14% Similarity=-0.000 Sum_probs=108.5
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh-hhhH-HHHHHHHHHhhcccCch
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG-HSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~-~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
++.+.+....+++.+.+.+.....+++.|++.||++ .......+..+....... .++. .+++..++.|+|.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 455667778888888888888888899999999998 222222222222222222 2344 66778899999988888
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCC
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEP 180 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~ 180 (455)
|.....+.|..|++.|++..+..+ ...+|..+||.+++.+.++ .|-+..|++.+...++..++...-.+|+|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT---LPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH---cChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 888999999999999999988765 5668999999999999998 88888888877666665555554444444
No 177
>PRK15075 citrate-proton symporter; Provisional
Probab=98.68 E-value=6e-07 Score=87.90 Aligned_cols=128 Identities=11% Similarity=0.032 Sum_probs=86.8
Q ss_pred hcccC-cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH--H--HHHhhhhH-HHHHHHHH
Q psy3467 25 VHHKD-GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV--P--VAAGHSIL-ALSIIRFI 95 (455)
Q Consensus 25 ~~~~~-~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~--~--~~~~~~~~-~~~~~r~l 95 (455)
.|... +++|.+..+.++....+.++..++.+..|+++||+| ..+.......... . .....++. ......++
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELW 340 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 44433 347888888999999999999999999999999999 2222111111111 1 11112233 34444555
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHh-hHHHHHHHHHHHHHHhHhcccCCCCc
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYA-GAQFGTVFSLPLSGLLSEYGFAGGWP 155 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~i~~~l~~~~~~~~wr 155 (455)
.|++.+...+....++.|.+|+++|+...++... +..++..++|.+.+.+.++ .|++
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~---~g~~ 398 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV---TGDK 398 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh---cCCc
Confidence 5666666666677889999999999999998644 4445677899999999887 6754
No 178
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.67 E-value=4.2e-07 Score=87.89 Aligned_cols=144 Identities=14% Similarity=0.071 Sum_probs=100.2
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhc
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~ 99 (455)
+|...+|.+.++.+.+++.+...++...+..+.+++.|| ++ .......+..+........++. .+.+..++.|++
T Consensus 231 ~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g 310 (400)
T PRK11646 231 LPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIG 310 (400)
T ss_pred hhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 344444444467888998888888777667667777765 55 2223333333333333344555 666677888888
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCC-chhHHHhhHHHHHH
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGW-PSIFYVFGLVGAVW 168 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~w-r~~f~~~~~~~~~~ 168 (455)
.+...|...+++.|..|+++||+.+++.+....+|..+||.+++.+.++.+..+. +..+++.++.+++.
T Consensus 311 ~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 380 (400)
T PRK11646 311 SIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLIT 380 (400)
T ss_pred HHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999999999999999886321233 45555545555443
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.63 E-value=1.5e-06 Score=84.41 Aligned_cols=146 Identities=12% Similarity=-0.009 Sum_probs=101.8
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH-----hhhhH-HHHHHHHHHhhc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA-----GHSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~-----~~~~~-~~~~~r~l~G~~ 99 (455)
.+++|.++.+.++......++..++.++.|+++||+| ..........+...... ..++. .+++.-++.|++
T Consensus 243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 4567888889999888888899999999999999999 22222222221111111 12234 667788889998
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
.+...+.......+. ++++||+..+..+....+|..+|+.+++.+.+. .++....+..++.+++.......+.++
T Consensus 323 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 323 IGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG---GGNGLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred HHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC---CchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 887766666655443 458999999999999999999999999998776 677666666555555544444444443
No 180
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.63 E-value=9e-08 Score=88.56 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHH
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEKFSHTSTRKIINA 299 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 299 (455)
.++.-.+.....++..+.+....+. +++++|+|+.|.+++...+.+...+.+++.|.+.||+|.|+. ..
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~-i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~----------~~ 83 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVF-IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKW----------TI 83 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHH----------HH
Confidence 4444444444444444434444444 446699999999999999999999999999999999999965 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--hH----HhcCCCCceEEEEEecCcccccccCCCCCccccccccCCCccccccccccc
Q psy3467 300 FLYQVLSFGMIVSSALMIWKG--LM----VLTGSESPIVVVLREDGSVKFLTKGDNNSVDDRGLYAPGQLWLTKNDVVGR 373 (455)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (455)
.+.....+-.+..+....+.. .+ ...|..|-.. ....++...-+|....+. ....+..||
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF------------av~m~~~s~~fP~~~qG~--AlGI~g~GN 149 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF------------AVGMPNASFFFPKEKQGL--ALGIAGAGN 149 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccccee------------hcccccccccCChhhhhH--HHHHhcccc
Confidence 443333333333222222110 11 1122222111 111122222222111110 000011222
Q ss_pred -----ccccccceeeE-E-----------------------EEeccCCCCCCC----C-CcHHHHHhhHHHHHHHHHHhc
Q psy3467 374 -----ARGFLPYVGMV-T-----------------------IYMNEYPKFKSP----P-VPWKDIVSSLPFWAILIAHMG 419 (455)
Q Consensus 374 -----~~g~~~~~~~~-~-----------------------~~~~~~~~~~~~----~-~p~~~~~~~~~~~~~~~~~~~ 419 (455)
.....|..... + -.+++.+..+.. . .+.+.+++++.+|.+.+-|+.
T Consensus 150 ~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~ 229 (417)
T COG2223 150 LGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFA 229 (417)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHH
Confidence 11111111100 0 012333331111 1 235668899999999999999
Q ss_pred chhhHHHHHhhhhHHHHHhhccccccceeeec
Q psy3467 420 QNYGYETLMTELPTFMKQVLHFNIKEHGSVRV 451 (455)
Q Consensus 420 ~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~~ 451 (455)
.-=.+-.+-.|+|.|+++++++|..+.|.+++
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~ 261 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAF 261 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHH
Confidence 98899999999999999999999998876654
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.63 E-value=1.9e-06 Score=83.22 Aligned_cols=141 Identities=13% Similarity=0.010 Sum_probs=107.0
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-H-HHHHHHHHHHH-HHHHHhhhhH-HHHHHHHHHhhccc
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-I-GMLINSVFAFL-VPVAAGHSIL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~-~l~~~~~~~~~-~~~~~~~~~~-~~~~~r~l~G~~~~ 101 (455)
|...+++|.+..+.+++.+.+.++..++.++.+++.||.+ . .+....+.... .......++. .+.+..++.|++.+
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3344567899999999999999999999999999999977 2 22222221221 1222223344 66778899999999
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHH
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
...+...+.+.+..| +++++..+......++|..+|+.++|.+.+. .|++..++..+.+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~---~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN---IGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhhHHHHHHHHHHHHHH
Confidence 889999989999886 6677888888888999999999999999998 8899888887766555333
No 182
>KOG2504|consensus
Probab=98.62 E-value=2.8e-07 Score=90.76 Aligned_cols=148 Identities=19% Similarity=0.259 Sum_probs=123.5
Q ss_pred hhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-----HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHh
Q psy3467 24 RVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-----IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQG 97 (455)
Q Consensus 24 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-----~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G 97 (455)
.++...++.+.++.+.+.+.++..+...++.++.|.++|+.. ...+...+..+....+.+.+++ .+...-.+.|
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 345566689999999999999999999999999999999988 3333333334444566777888 9999999999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
++.|........++.|+.+.++-..+.|+......++..+||.+++.+.+.. .+|...|+..+...++...+.+
T Consensus 400 ~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t--g~Y~~~f~~~g~~~~~s~~~~~ 473 (509)
T KOG2504|consen 400 FCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT--GNYDHAFYFCGLCFLLSAVLLL 473 (509)
T ss_pred HHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc--CCeeeehhhcChHHHHHHHHHH
Confidence 9999888888899999999999999999999999999999999999887761 3499999999888877554443
No 183
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.61 E-value=3.3e-05 Score=78.44 Aligned_cols=144 Identities=19% Similarity=0.199 Sum_probs=104.5
Q ss_pred ccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh---HHHHHHHHHHHHHHHHHhh--------hhH-HHHHHHHHHh
Q psy3467 31 SFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG---IGMLINSVFAFLVPVAAGH--------SIL-ALSIIRFIQG 97 (455)
Q Consensus 31 ~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G---~~l~~~~~~~~~~~~~~~~--------~~~-~~~~~r~l~G 97 (455)
.+|.++++...+...+....-+...++|.++|+ +| ..+.+..+..++..+.+.. ... ..+++-.+..
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIA 96 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHH
Confidence 478888888888888888888999999999996 56 3333333333333322221 011 3566777788
Q ss_pred hcccCchhhHHHHHhcccCCC---cchhHHHHHHhhHHHHHHHHHHHHHHhHhcc----cCCCCchhHHHhhHHHHHHHH
Q psy3467 98 LGEGPIVPCTHALLAKWIPPT---ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG----FAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~----~~~~wr~~f~~~~~~~~~~~i 170 (455)
+|.|..-|...+...|-++++ +|-....++..+.++|..+++.+.+.+.+.. ...+|...|.+.++..++..+
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~l 176 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALI 176 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHH
Confidence 899999999999999999754 3677888889999999999999998886430 013699999988887777555
Q ss_pred Hhhh
Q psy3467 171 AFLL 174 (455)
Q Consensus 171 ~~~~ 174 (455)
+...
T Consensus 177 vf~~ 180 (654)
T TIGR00926 177 VFMA 180 (654)
T ss_pred HHHH
Confidence 5443
No 184
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.58 E-value=8.1e-07 Score=98.02 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=103.9
Q ss_pred Ccccccccc-hhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCc
Q psy3467 29 DGSFIWTTA-EQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPI 103 (455)
Q Consensus 29 ~~~~~~s~~-~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~ 103 (455)
.+++|.+.. +.+++.+...++..+++++.|+++||++ ...++..+..+.........+. .+++..++.|++.+..
T Consensus 260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 339 (1146)
T PRK08633 260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLF 339 (1146)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 456788888 9999999999999999999999999998 2222222222333333333455 7778889999999988
Q ss_pred hhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 104 VPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 104 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+...+++.+..|+++||+++++.+....+|..+++.+++.+...+ .++...+++.+.+.++
T Consensus 340 ~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 340 IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLG--LSPAGLFYLIALVTLI 401 (1146)
T ss_pred hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999988888887765421 3555566665554443
No 185
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.55 E-value=2.1e-07 Score=90.40 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=111.1
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-------HHHHHHHHHH-HHHH---HHHh-hhhH-HHHHH
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-------IGMLINSVFA-FLVP---VAAG-HSIL-ALSII 92 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-------~~l~~~~~~~-~~~~---~~~~-~~~~-~~~~~ 92 (455)
+-+++++|+++++.....++..+.. ...++.|.++|.+- .+++...+.. .... .... ..+. ...+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 3456789999999999888888776 45788999999764 3333222222 1111 1111 2234 56666
Q ss_pred HHHHhhcccCchhhHHHHHhcccC--CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHH
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIP--PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
-++..+|.+.....+-+++.|... +++||...+.......+|.+++..++|.+.+. .+.|+.|.+.+++..+..+
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHHHH
Confidence 788888888889999999999984 34578888888899999999999999999998 8999999998888877666
Q ss_pred Hhhhhccc
Q psy3467 171 AFLLYCYE 178 (455)
Q Consensus 171 ~~~~~~~e 178 (455)
...+..+|
T Consensus 170 ~~~~~~~e 177 (433)
T PF03092_consen 170 VALFLLEE 177 (433)
T ss_pred HHHHhhhh
Confidence 66666666
No 186
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.54 E-value=3.5e-06 Score=82.49 Aligned_cols=146 Identities=16% Similarity=0.049 Sum_probs=86.8
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH--HH--HHhhhhH-HHHHHHHHHhhcc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV--PV--AAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~--~~--~~~~~~~-~~~~~r~l~G~~~ 100 (455)
.+++|.+..+.++..++..++..+++++.|+++||+| ..+....+..+.. .. ....++. ..+..-.+.+...
T Consensus 271 ~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (432)
T PRK10406 271 VNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIV 350 (432)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 3557888888999999888888999999999999999 2222111111111 11 1111222 2222222222233
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHH-HHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQF-GTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~-G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
+...+....+.+|++|+|.|+.+.|+.+...++ .....|.+.+.+... ..|...++..+...++..+. .+++++
T Consensus 351 ~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~---g~~~~~~~~~~~~~~i~~~~-~~~l~~ 425 (432)
T PRK10406 351 SFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI---GMETAFFWYVTLMAVVAFLV-SLMLHR 425 (432)
T ss_pred HHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHHHH-HHHhhh
Confidence 333455678899999999999999998865443 344477777766443 34655666555555553333 334443
No 187
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.53 E-value=1.8e-06 Score=82.08 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=90.3
Q ss_pred hhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhc
Q psy3467 24 RVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLG 99 (455)
Q Consensus 24 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 99 (455)
.+|...+|.|.+..+.+.+.+...++..++.++.|+++||++ .......+..++........+......-.+.|++
T Consensus 219 ~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 298 (355)
T TIGR00896 219 WLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLG 298 (355)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 344445567889999999999999999999999999999995 2222222222222222222222112245678999
Q ss_pred ccCchhhHHHHHhcccC-CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 100 EGPIVPCTHALLAKWIP-PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 299 QGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred hhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888887776554 46678889998888899999999999999886
No 188
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.53 E-value=1.8e-06 Score=86.30 Aligned_cols=137 Identities=18% Similarity=0.028 Sum_probs=83.9
Q ss_pred HHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh----hhH-HHHHHHHHHhhcccCchhhHHHHHhccc
Q psy3467 44 SSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH----SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWI 115 (455)
Q Consensus 44 s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~----~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~ 115 (455)
.+..++..++.++.+.++||+| ..+....+..+........ +.. .+...-+...++.....+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3444566678889999999999 2222222222222111111 111 1111111111222223456677789999
Q ss_pred CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc-------CCCCchhHHHhhHHHHHHHHHhhhhcccCCC
Q psy3467 116 PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF-------AGGWPSIFYVFGLVGAVWSVAFLLYCYEEPE 181 (455)
Q Consensus 116 ~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~-------~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~ 181 (455)
|.+.|+++.++.+....+|.+++|.+.+.+.+.+. ..+++..|++.+++.++..+ ..+++||++.
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i-~~~~lpEt~~ 493 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL-FTLLIPETKG 493 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH-HheEeccCCC
Confidence 99999999999999999999999999998876310 02345677777777766544 4467788654
No 189
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.52 E-value=1e-06 Score=97.07 Aligned_cols=137 Identities=19% Similarity=0.143 Sum_probs=102.5
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHH-----------------Hhhh
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVA-----------------AGHS 85 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~-----------------~~~~ 85 (455)
.+.+|.+..+.|++.+.+.++..+++++.|+++||.+ ...++.++..+..... ...+
T Consensus 253 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1140)
T PRK06814 253 KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR 332 (1140)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence 3457889999999999999999999999999998766 1222222211111111 0012
Q ss_pred hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHH
Q psy3467 86 IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLV 164 (455)
Q Consensus 86 ~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~ 164 (455)
+. .+++..++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+.... .+.+..+++.+..
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~~~~ 410 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFIALA 410 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHH
Confidence 33 66778889999999999999999999999999999999999999999999999999887431 4566666655554
Q ss_pred HHH
Q psy3467 165 GAV 167 (455)
Q Consensus 165 ~~~ 167 (455)
.++
T Consensus 411 ~~~ 413 (1140)
T PRK06814 411 NLI 413 (1140)
T ss_pred HHH
Confidence 443
No 190
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.52 E-value=0.00011 Score=69.33 Aligned_cols=250 Identities=13% Similarity=0.128 Sum_probs=156.9
Q ss_pred cccccchhh-HHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhh
Q psy3467 32 FIWTTAEQG-YVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPC 106 (455)
Q Consensus 32 ~~~s~~~~~-~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~ 106 (455)
.|+++.|+. -+.-+..-.+....++...+.|..| +.++......+.-.+.-+.++. .+-+..+.-|++.+ ...+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a-~eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATA-AEVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHH-HHHH
Confidence 778777764 4555666677788889999999999 3333333333333334445677 99999999999877 5788
Q ss_pred HHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCC---C
Q psy3467 107 THALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEA---H 183 (455)
Q Consensus 107 ~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~---~ 183 (455)
-.+++--..|+++--++.+....+..+|..++.+++..+...+. .+.+...++......+ ..+..+++|..++. +
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~-~sy~~L~~isl~~~~~-a~~~~~fLP~~~~S~~f~ 191 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG-VSYFQLNYISLASVSL-ALLIALFLPMPKRSLFFH 191 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHH-HHHHHHHcCCCCccccee
Confidence 88999999999999999999999999999999999998877411 2444554454433333 44445566665432 1
Q ss_pred CCCChhHH------HHHhhhcccc--c-CCCCCC-----------CCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhh
Q psy3467 184 PNIAEDER------KYIMSSVWGL--A-GVASSP-----------PVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELP 243 (455)
Q Consensus 184 ~~~~~~~~------~~~~~~~~~~--~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
+..++++. +...+..++. + ++.+.. ..++++..++|.++...+-+.+...++..+..+..
T Consensus 192 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ 271 (412)
T PF01770_consen 192 RKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQ 271 (412)
T ss_pred ccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence 11111000 0000000000 0 000000 12234556788888877877888888888888777
Q ss_pred HHHHHH--hcCccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 244 TFMKQV--LHFNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 244 ~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
...++. -+-+..-+|.+-....+.+.++.+..|++..++.+
T Consensus 272 ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~ 314 (412)
T PF01770_consen 272 SLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR 314 (412)
T ss_pred HHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence 777663 13334456777777777777777888887444443
No 191
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.52 E-value=1.8e-06 Score=76.18 Aligned_cols=157 Identities=8% Similarity=0.056 Sum_probs=105.3
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH-----HHhh--hhH-
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV-----AAGH--SIL- 87 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~-----~~~~--~~~- 87 (455)
...+..-|++++.+|+|.+|...+.+.-.+|..+ .++.|.+.||+| +.+++......+-.. .... .++
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 3344444667888999999999999999999987 588999999999 333333333222221 1111 233
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+.+..++.|.+.+.....+.....+.+| ++||++.++.-....++..+-..+...+.+. ..-+. +.+.+....+
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~---~~~~f-ll~la~~~~~ 172 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD---DPSSF-LLFLAVLPAV 172 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC---ChHHH-HHHHHHHHHH
Confidence 66667777777776666777777778887 6899999999999999888777776666553 22333 3344444444
Q ss_pred HHHHhhhhcccCCC
Q psy3467 168 WSVAFLLYCYEEPE 181 (455)
Q Consensus 168 ~~i~~~~~~~e~~~ 181 (455)
..++..+++++.|+
T Consensus 173 v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 173 VCLVAMFFVRPVPP 186 (250)
T ss_pred HHHHHhhheeccCC
Confidence 34555556665544
No 192
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.51 E-value=0.00015 Score=70.48 Aligned_cols=250 Identities=11% Similarity=0.064 Sum_probs=138.2
Q ss_pred cCccccc-----ccchhhHHHHHHHHHHHHh-hhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh--------------
Q psy3467 28 KDGSFIW-----TTAEQGYVLSSFFYGYVLT-QIPFGILAKKYG---IGMLINSVFAFLVPVAAGH-------------- 84 (455)
Q Consensus 28 ~~~~~~~-----s~~~~~~~~s~~~l~~~~~-~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~-------------- 84 (455)
+++.+.+ +.+...++-+...+..++. .++.+++++|++ +.-.....+.....+.++.
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~ 108 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALA 108 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHH
Confidence 4555544 3357888888887877776 899999999999 1111111111111111100
Q ss_pred ------------------hhHHHHHHHHHHhhcccCchh-hHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 85 ------------------SILALSIIRFIQGLGEGPIVP-CTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 85 ------------------~~~~~~~~r~l~G~~~~~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
+++...+......+-...... .-..+++|.++++|-.|..+++..+.++|..+++.+..++
T Consensus 109 ~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 109 DKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222333344443344444 6778999999999999999999999999999999998887
Q ss_pred Hhcc-----cCCCCc----hhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhh
Q psy3467 146 SEYG-----FAGGWP----SIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIV 216 (455)
Q Consensus 146 ~~~~-----~~~~wr----~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (455)
.+.. ....|. ..+.+.++...+ .+...+.+.+....+++..+.++ + .+.++.+....+..+.++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~-----~-~~k~k~k~~~~es~k~i~ 261 (472)
T TIGR00769 189 SKLRASLGPGVDGWHVSLKNLMVIVICSGLA-IILLYWWVNRNVLTDPRSYNPAL-----K-EKKVKPKMSTMESLKFLV 261 (472)
T ss_pred HHhhhccccccChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCccccchhh-----c-cccCCCCCCHHHHHHHHH
Confidence 6310 012342 233333333333 33333333322221111111110 0 000111122345567788
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccc-c---hhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 217 SSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKE-N---GTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~---g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
|+|.++.+++...+.....+.+...--...++.+- |+.+ . |.+....++...+.+++.+++.+|+|-+
T Consensus 262 ~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 262 SSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99988888887777766666665544445555442 3322 2 3333444555556666778888888865
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.51 E-value=4.9e-06 Score=78.74 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=121.1
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHH-HHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchh
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGML-INSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVP 105 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~-~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~ 105 (455)
++-+.++...|++.++..+.-.+.-.+..++.+|+| ..++ ...+..+=...++++++. .+.+.+.+.|+..+....
T Consensus 252 ~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 252 QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLV 331 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 344556677999999999999999999999999999 3333 333334444566777788 999999999999999999
Q ss_pred hHHHHHhcccCCCcchhHHHHH-HhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCC
Q psy3467 106 CTHALLAKWIPPTERSRLGAFV-YAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAH 183 (455)
Q Consensus 106 ~~~~~i~e~~~~~~r~~~~~~~-~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~ 183 (455)
....++++.+|+|..++...+. +.+..+|..+.+.++|.+.++ .|.+..|++.+.+.+...++..+.+++++++.
T Consensus 332 a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~---~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 332 AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR---IGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh---cCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 9999999999988888888774 688999999999999999998 89999999999998888888888887765543
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.51 E-value=5.6e-06 Score=80.22 Aligned_cols=138 Identities=22% Similarity=0.240 Sum_probs=91.1
Q ss_pred cCcccccccchhhHHHHHHH-HHHHHhhhhhHHHHhHHh---HHHHHHHHHHHH---HHHHHhh-hhH-HHHHHH----H
Q psy3467 28 KDGSFIWTTAEQGYVLSSFF-YGYVLTQIPFGILAKKYG---IGMLINSVFAFL---VPVAAGH-SIL-ALSIIR----F 94 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~-l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~---~~~~~~~-~~~-~~~~~r----~ 94 (455)
+.+++|.++++.+++.+... .+..++.++.|++.||+| ..........+. ....... ++. .+.+.- +
T Consensus 236 l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PRK11902 236 LIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL 315 (402)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 44568999999999987654 568899999999999999 221222211111 1111222 333 344433 4
Q ss_pred HHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
..|++.+...+....++.+.+|.++ .++.+...++|..+++.+++.+.++ .||+..|.+.+.++++..++.
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEA---YGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHH
Confidence 5556666666777777777776544 4555556677887777789999998 999999999888877744443
No 195
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.50 E-value=5.1e-06 Score=77.15 Aligned_cols=129 Identities=12% Similarity=-0.006 Sum_probs=94.4
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCchhh
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGM-LINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIVPC 106 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l-~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 106 (455)
+++|.++++.++..+.+..+..+|.+..+++.||+| ..+ ....+..+........+.......-++.|++.+..+|.
T Consensus 171 ~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 171 HALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPT 250 (310)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999 222 22222222222222222232234556889999999999
Q ss_pred HHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 107 THALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 107 ~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
..+...+..|+ +.+.+.++. ....+|..+.|.+.|.+.+. .|-+..|++..+
T Consensus 251 ~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~---~g~~~a~~v~~~ 302 (310)
T TIGR01272 251 IFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADC---LGIQLAFALPVP 302 (310)
T ss_pred HHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHh---ccchHHHHHHHH
Confidence 99999998874 455666665 55678999999999999987 788888875433
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.49 E-value=6.2e-06 Score=79.58 Aligned_cols=138 Identities=16% Similarity=0.018 Sum_probs=100.2
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
++.+|.++.+.|++.+...++..++++..+++.||.+ ....+... ..........++. ...+.-++.|++.+...
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~ 311 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFV 311 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhh
Confidence 4457889999999999999999999999999999988 22222222 1222222333444 56677788999988888
Q ss_pred hhHHHHHhcccCCCc-chhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 105 PCTHALLAKWIPPTE-RSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~-r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
+...+.+.|..|+|. +|++.++.+...++|..++..+.+.+.. .|-|..+.+.+...++...+
T Consensus 312 ~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 312 VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK----LGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHH
Confidence 888888888766554 7999999999999999999999987754 46566655544433333333
No 197
>TIGR00898 2A0119 cation transport protein.
Probab=98.48 E-value=4.4e-06 Score=83.60 Aligned_cols=134 Identities=13% Similarity=-0.021 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh-hh--HHHHHHHHHHhhcccCchhhHHHHHhccc
Q psy3467 42 VLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH-SI--LALSIIRFIQGLGEGPIVPCTHALLAKWI 115 (455)
Q Consensus 42 ~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~-~~--~~~~~~r~l~G~~~~~~~~~~~~~i~e~~ 115 (455)
...+..+....+.++.+.++||+| .......+..+........ +. ....+.-++.+++.+...+....+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 334556677788899999999999 2222222222222222221 12 24445556666777777888899999999
Q ss_pred CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCC
Q psy3467 116 PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPE 181 (455)
Q Consensus 116 ~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~ 181 (455)
|++.|+.++++.+....+|.+++|.+.+ +.+ .++...+.+.+...++..+. .+++||+..
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----~~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 499 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-LGE----KWLFLPLVLFGGLALLAGIL-TLFLPETKG 499 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH----HHHhhHHHHHHHHHHHHHHH-HHcCcCCCC
Confidence 9999999999999999999999999998 444 46677788777777664444 456787643
No 198
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.46 E-value=6.2e-06 Score=79.32 Aligned_cols=143 Identities=14% Similarity=0.074 Sum_probs=93.4
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHH-HhhhhH-HHHHHHHHHhhcccC
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVA-AGHSIL-ALSIIRFIQGLGEGP 102 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~-~~~~~~-~~~~~r~l~G~~~~~ 102 (455)
..+.+|.++++.+++.+...++..++.++.|++.||+| .......+..+..... ...++. ..++..++.+++...
T Consensus 226 ~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 305 (382)
T PRK10091 226 MMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFA 305 (382)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 34457889999999999999999999999999999999 2222222222222111 122333 455556666665544
Q ss_pred chhhHH-HHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 103 IVPCTH-ALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 103 ~~~~~~-~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
..+... ....+..++|.++.. ..+....+|..+||.+++.+.+.. .+|++.+...+.++.+.......
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 306 LSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLG--LAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred hhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcc--cCcchHHHHHHHHHHHHHHHHHH
Confidence 444334 344444444555544 346678899999999999998841 68999999887776664444333
No 199
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.44 E-value=1.2e-07 Score=96.51 Aligned_cols=51 Identities=12% Similarity=0.245 Sum_probs=46.7
Q ss_pred HHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeeec
Q psy3467 401 WKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVRV 451 (455)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~~ 451 (455)
++.+++++.+|...++.++....++.+.+|+|+|+++++|++..+.|++..
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~ 373 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIG 373 (633)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhh
Confidence 456899999999999999999999999999999999999999999887654
No 200
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.42 E-value=3.9e-07 Score=88.52 Aligned_cols=51 Identities=4% Similarity=0.004 Sum_probs=45.0
Q ss_pred cHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeee
Q psy3467 400 PWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVR 450 (455)
Q Consensus 400 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~ 450 (455)
+++++++++++|...+..++.+..++.+.+++|.|++|.+|+|..+.|+..
T Consensus 210 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 210 DFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence 567789999999999998888888999999999999999999988877653
No 201
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.41 E-value=1.3e-05 Score=77.02 Aligned_cols=151 Identities=17% Similarity=0.205 Sum_probs=107.4
Q ss_pred cccCcccc-cccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHH-HHHHhh-hhH-HHH----HHHHH
Q psy3467 26 HHKDGSFI-WTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLV-PVAAGH-SIL-ALS----IIRFI 95 (455)
Q Consensus 26 ~~~~~~~~-~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~-~~~~~~-~~~-~~~----~~r~l 95 (455)
+..-+|.| .+.+..+.+.++..++-.+.-...+++..|+| ..+....+..+.- ...+.. ++. ... ....+
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~l 310 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLL 310 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhh
Confidence 33345556 66777788888888888899999999999999 3333333333332 222222 332 333 33557
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHh-hHHHHHHHHHHHHHHhHhcccCCC------CchhHHHhhHHHHHH
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYA-GAQFGTVFSLPLSGLLSEYGFAGG------WPSIFYVFGLVGAVW 168 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~i~~~l~~~~~~~~------wr~~f~~~~~~~~~~ 168 (455)
+|+..+..+.....++.+..|++.|+++.++++. ...+|..+|..++|++.++ .| |...+.+.+.+.++.
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~---~g~~~~~~~~~~~~v~a~~~~~~ 387 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA---FGARGMFDWSAVFLVFAVMALVI 387 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH---hcchhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999886 4689999999999999986 44 444555666666665
Q ss_pred HHHhhhhcccC
Q psy3467 169 SVAFLLYCYEE 179 (455)
Q Consensus 169 ~i~~~~~~~e~ 179 (455)
.++...+.||+
T Consensus 388 ~~~f~~~fk~~ 398 (400)
T PF03825_consen 388 LVLFVILFKPK 398 (400)
T ss_pred HHHHHhhccCC
Confidence 55555555553
No 202
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.40 E-value=1.5e-06 Score=82.22 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=93.8
Q ss_pred HHHhhhhhcc-cCcccccc-cchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHH---HHHHHHHHHHhhhhH-H
Q psy3467 18 NTKLTRRVHH-KDGSFIWT-TAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINS---VFAFLVPVAAGHSIL-A 88 (455)
Q Consensus 18 ~~~l~~~~~~-~~~~~~~s-~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~---~~~~~~~~~~~~~~~-~ 88 (455)
.......+|. ..+++|.+ ..+.++..+...+...++.++.|+++||+| ....... +...........++. .
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVW 301 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHH
T ss_pred HHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3334455555 37888999 789999999999999999999999999998 2222122 222222222223334 6
Q ss_pred HHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHH
Q psy3467 89 LSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSL 139 (455)
Q Consensus 89 ~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~ 139 (455)
.+..-++.|++.+...+....++.|..|+|+|+++.++.+...++|..+||
T Consensus 302 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 302 LIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 677888899999999999999999999999999999999999999999987
No 203
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.37 E-value=5.2e-06 Score=81.83 Aligned_cols=146 Identities=14% Similarity=-0.011 Sum_probs=106.1
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH----------hhhhH-HHHHHHHH
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA----------GHSIL-ALSIIRFI 95 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~----------~~~~~-~~~~~r~l 95 (455)
+++|.++.+.|.+.+...++..++....+++.+|++ .......+..+...... ..++. ..+..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999999999999999999999999999999 22222222222221110 01223 55566788
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC-----CchhHH--HhhHHHHHH
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG-----WPSIFY--VFGLVGAVW 168 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~-----wr~~f~--~~~~~~~~~ 168 (455)
.+++.+........++.+..|++++|...++.+...++|..+++.+++.+.++ .| .+..+. +...+.-+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~---~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET---IGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcccccchHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999999999886 44 443333 333332233
Q ss_pred HHHhhhhccc
Q psy3467 169 SVAFLLYCYE 178 (455)
Q Consensus 169 ~i~~~~~~~e 178 (455)
.+...+++|+
T Consensus 438 ~l~~~~llP~ 447 (468)
T TIGR00788 438 PLPLLHLLPR 447 (468)
T ss_pred HHHHHHhCCC
Confidence 3444457786
No 204
>PRK09848 glucuronide transporter; Provisional
Probab=98.36 E-value=1.5e-05 Score=78.41 Aligned_cols=120 Identities=12% Similarity=-0.052 Sum_probs=85.5
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh--hhH-HHHHHHHHHhhcccC
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH--SIL-ALSIIRFIQGLGEGP 102 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~--~~~-~~~~~r~l~G~~~~~ 102 (455)
++.+|.++...++......++..++.++.++++||+| ....+..+..+........ ++. .+.+..++.|+|.+.
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 3446666555555555556778889999999999999 3332332222222222222 233 566678889999999
Q ss_pred chhhHHHHHhcccCCC-------cchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 103 IVPCTHALLAKWIPPT-------ERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~-------~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
..+...++.+|..|++ ++|...+..+....+|..+++.+.+.+.+.
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988754 358899999999999999999999888764
No 205
>KOG2533|consensus
Probab=98.35 E-value=5.5e-07 Score=87.81 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=49.6
Q ss_pred CCCcHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeeeccc
Q psy3467 397 PPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVRVTS 453 (455)
Q Consensus 397 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~~~p 453 (455)
++..+++.++++.+|...++++|..-..+++.+|+|.|+++..|+|-.+...++...
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~ 318 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPY 318 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchH
Confidence 345667889999999999999999999999999999999997789888887776543
No 206
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.34 E-value=6.5e-06 Score=82.02 Aligned_cols=120 Identities=13% Similarity=0.107 Sum_probs=95.0
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHH---HHhhhhH-HHHHHHHHHhhccc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPV---AAGHSIL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~---~~~~~~~-~~~~~r~l~G~~~~ 101 (455)
++.+|.|+.+.|+....+.++..++.++.|++.||+| ....+..+..+.... ....++. ......++.|+|.+
T Consensus 287 q~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g 366 (495)
T PRK14995 287 QFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAA 366 (495)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHH
Confidence 4457889999999999999999999999999999999 222222222222211 1112233 55678899999999
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
...+.....+.+..|+++++.+.++.+...++|..+|+.+.+.+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 367 SALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998999999999999999999999999999999999999988653
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.32 E-value=1.1e-05 Score=74.57 Aligned_cols=144 Identities=29% Similarity=0.476 Sum_probs=106.0
Q ss_pred hhhcccCccccccc--chhhHHHHHHHHHHHHhhhhhHHHHhHHh-H--HHHHHHHHHHHHHHHHhhhh--H-HHHHHHH
Q psy3467 23 RRVHHKDGSFIWTT--AEQGYVLSSFFYGYVLTQIPFGILAKKYG-I--GMLINSVFAFLVPVAAGHSI--L-ALSIIRF 94 (455)
Q Consensus 23 ~~~~~~~~~~~~s~--~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~--~l~~~~~~~~~~~~~~~~~~--~-~~~~~r~ 94 (455)
+..+...++++.+. .+.++..+.+.++..+++++.|.++||+| . ...................+ . .+++.|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRL 102 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 34444444555444 47899999999999999999999999998 2 22222111222233333333 5 9999999
Q ss_pred HHhhcccCchhhHHHHHhcccCC-CcchhHHHHHHh-hHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPP-TERSRLGAFVYA-GAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~-~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... ...+||+.|.........
T Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 103 LQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHH
Confidence 99999999999999999999987 689999999888 5888999999888777654 336899977766655544
No 208
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.29 E-value=7.7e-06 Score=77.79 Aligned_cols=110 Identities=15% Similarity=0.008 Sum_probs=79.9
Q ss_pred hhhcccCcccccccchhhHHHHHHH-HHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh---h--------hhH
Q psy3467 23 RRVHHKDGSFIWTTAEQGYVLSSFF-YGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG---H--------SIL 87 (455)
Q Consensus 23 ~~~~~~~~~~~~s~~~~~~~~s~~~-l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~---~--------~~~ 87 (455)
..++...+++|.++++.+.+.++.. ++..++.+++|++.||+| .......+..+....... . ++.
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 3344444558899999998888766 678899999999999999 222222222222121111 1 233
Q ss_pred -HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHH
Q psy3467 88 -ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQ 132 (455)
Q Consensus 88 -~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~ 132 (455)
.+....++.+++.+...+...+++.|.+|+|+||+.+++.+...+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 677788999999999999999999999999999999999887654
No 209
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.27 E-value=1e-05 Score=80.49 Aligned_cols=119 Identities=16% Similarity=0.150 Sum_probs=93.5
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH--h--hhhH-HHHHHHHHHhhccc
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA--G--HSIL-ALSIIRFIQGLGEG 101 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~--~--~~~~-~~~~~r~l~G~~~~ 101 (455)
+.+|.++.+.++......++..++.++.|++.||+| ....+..+..+...... . ..+. .+....++.|++.+
T Consensus 284 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~ 363 (485)
T TIGR00711 284 QVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMG 363 (485)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999 22222222222222222 1 1233 56667889999998
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
...+.......|..|+++|+.+.++.+....+|..+|+.+.+.+.++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 364 CFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877788888889999999999999999999999999999988764
No 210
>PRK10133 L-fucose transporter; Provisional
Probab=98.26 E-value=3e-05 Score=75.88 Aligned_cols=134 Identities=14% Similarity=0.052 Sum_probs=97.4
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCchh
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIVP 105 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 105 (455)
++++|.++.+.++....+.++..++.++.|++.||+| +......+...........++...+..-.+.|++.+..+|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYP 366 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999 2222222222222222222332234556788999999999
Q ss_pred hHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCC-CchhHHHhhHHHHH
Q psy3467 106 CTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGG-WPSIFYVFGLVGAV 167 (455)
Q Consensus 106 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~-wr~~f~~~~~~~~~ 167 (455)
...+...|..+ |+.+.+.++... ..+|..++|.+.+.+.+. .| -|..|++..+..+.
T Consensus 367 ~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~---~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 367 TIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA---AGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHh---ccchHHHHHHHHHHHHH
Confidence 99999999986 456777777764 446888888888888887 66 78888765544443
No 211
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.21 E-value=5.1e-05 Score=72.88 Aligned_cols=113 Identities=14% Similarity=0.094 Sum_probs=80.4
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHH---HHHHhh--hhH-HHHHHHHHHhhc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLV---PVAAGH--SIL-ALSIIRFIQGLG 99 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~---~~~~~~--~~~-~~~~~r~l~G~~ 99 (455)
.+++|.++.+.+++.+...++..++.++.|++.||+| ..........+.. ...... +.. .+....++.|++
T Consensus 234 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 313 (385)
T TIGR00710 234 IDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIG 313 (385)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3568889999999999999999999999999999999 2222222222111 111111 233 556667888998
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHH-HHHHHHHHHH
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQ-FGTVFSLPLS 142 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~-~G~~~g~~i~ 142 (455)
.+...+.......|..| ++|+++.++.+.... +|...++.++
T Consensus 314 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 314 NSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899899876 789999999876654 4566666554
No 212
>PRK11043 putative transporter; Provisional
Probab=98.21 E-value=5.1e-05 Score=73.50 Aligned_cols=122 Identities=15% Similarity=0.087 Sum_probs=87.6
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--H----HHHHHHHHHHHHHHHHh--hhhH-HHHHHHHHH
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--I----GMLINSVFAFLVPVAAG--HSIL-ALSIIRFIQ 96 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~----~l~~~~~~~~~~~~~~~--~~~~-~~~~~r~l~ 96 (455)
|...+++|.++.+.++......++..++....+++.||+| . ......+.......... .++. .++....+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 4444567889999999888888899999999999999999 1 11111222111111111 2233 455666778
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
|++.+...+.......|..| ++|+++.++.+.....+...++.+.+.+.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 307 AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 88888888888888878775 6899999999988888888888888877553
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.17 E-value=5.9e-05 Score=74.61 Aligned_cols=136 Identities=18% Similarity=0.085 Sum_probs=102.0
Q ss_pred hhHHHHHHHHHHHHhhhhhH----HHHhH-Hh-----HHHHHHHHHHHHHHHHHh---------hhhH-HHHHHHHHHhh
Q psy3467 39 QGYVLSSFFYGYVLTQIPFG----ILAKK-YG-----IGMLINSVFAFLVPVAAG---------HSIL-ALSIIRFIQGL 98 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~g----~l~dr-~G-----~~l~~~~~~~~~~~~~~~---------~~~~-~~~~~r~l~G~ 98 (455)
.+++.+++.+...+.+++.. ++.|| .+ ...++..+..++...... ..+. +++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 67889999999998888855 55664 22 112222222222222211 2355 88999999999
Q ss_pred cccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc
Q psy3467 99 GEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY 177 (455)
Q Consensus 99 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~ 177 (455)
|.....|...+++.|..|++.||+.++++.....+|..+++.+....... .+|.+.|...++..++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP---QGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877665 68898888888777776666555443
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.17 E-value=9.9e-05 Score=73.12 Aligned_cols=114 Identities=15% Similarity=0.023 Sum_probs=82.9
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHH-----HhhhhH-HHHHHHHHHhhcccCchh
Q psy3467 35 TTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVA-----AGHSIL-ALSIIRFIQGLGEGPIVP 105 (455)
Q Consensus 35 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~-----~~~~~~-~~~~~r~l~G~~~~~~~~ 105 (455)
+++..+++.+...++..++.+++++++||+| ..+....+..+..... ...++. .+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777899999999999999999 2222222222111111 112334 666777888999999999
Q ss_pred hHHHHHhcccC-------CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 106 CTHALLAKWIP-------PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 106 ~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
...++++|..| .++.|...+......-+|..+++.+.+.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999976 33456688999999999999999999988764
No 215
>KOG3764|consensus
Probab=98.15 E-value=3e-06 Score=77.83 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=118.1
Q ss_pred HHHHHHHHhhhhhcc-cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-----HHHHHHHHHHHHHHHHHhhhh
Q psy3467 13 VSRVINTKLTRRVHH-KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-----IGMLINSVFAFLVPVAAGHSI 86 (455)
Q Consensus 13 ~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-----~~l~~~~~~~~~~~~~~~~~~ 86 (455)
..++....+-|.++. ..+.+..+.++.|+..--..+.+.++..+.|.++||++ ..+.+.....+.+....+.++
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~ 360 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATS 360 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhh
Confidence 334444455565555 34556666778888888889999999999999999999 222333333344445566778
Q ss_pred H-HHHHHHHHHhhcccCchhhHHHHHhcccCCC------cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHH
Q psy3467 87 L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT------ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFY 159 (455)
Q Consensus 87 ~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~------~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~ 159 (455)
+ .+.+-++..|++.+...........+..+++ --|...++...++.+|.++||.+++.+.+. .|.+|.-.
T Consensus 361 ~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~---iGF~wl~~ 437 (464)
T KOG3764|consen 361 IAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA---IGFEWLMT 437 (464)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee---hhHHHHHH
Confidence 8 8888888888888877776666666666543 346788999999999999999999999998 99999999
Q ss_pred HhhHHHHHHHHHhh
Q psy3467 160 VFGLVGAVWSVAFL 173 (455)
Q Consensus 160 ~~~~~~~~~~i~~~ 173 (455)
+.++..++..-+..
T Consensus 438 iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 438 IIGILNLIYAPVLL 451 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 98888877554443
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.14 E-value=9.9e-05 Score=71.27 Aligned_cols=118 Identities=12% Similarity=0.078 Sum_probs=89.3
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-HH---HHHHHHHHHHHHHHHh--hhhH-HHHHHHHHHhhcccC
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-IG---MLINSVFAFLVPVAAG--HSIL-ALSIIRFIQGLGEGP 102 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~~---l~~~~~~~~~~~~~~~--~~~~-~~~~~r~l~G~~~~~ 102 (455)
+.+|.++.+.+++......+..+++++.+++.||++ .. +.......+....... ..+. .+....++.|++.+.
T Consensus 236 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 315 (394)
T PRK11652 236 AVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM 315 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 347888999999999999999999999999999998 11 1111111111111111 1223 667778999999998
Q ss_pred chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 103 IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
..+...+...|..| ++++...++.+...++|..+++.+++.+.+.
T Consensus 316 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 316 LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999886 6889999999999999999999999887554
No 217
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.14 E-value=7.5e-05 Score=72.07 Aligned_cols=129 Identities=9% Similarity=-0.072 Sum_probs=75.0
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
++++|.++.+.+.+.+...++..++.++.+++.||+| ..........+........+.. ..+..-.+.+.|.+...
T Consensus 231 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 310 (392)
T PRK10473 231 MEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGF 310 (392)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567888889999999999999999999999999999 2222222222222222222222 23333333333333332
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHH
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVG 165 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~ 165 (455)
+. ....+..|.++|+ +..+....++..+++.+++++.+. .|+.....+.+.+.
T Consensus 311 ~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~---~g~~~~~~~~~~~~ 363 (392)
T PRK10473 311 GV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAV---LGISAWNMLIGILI 363 (392)
T ss_pred HH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHH---hccchhHHHHHHHH
Confidence 22 2334455555543 333444567777778888777776 67665555444433
No 218
>PRK09669 putative symporter YagG; Provisional
Probab=98.12 E-value=7e-05 Score=73.58 Aligned_cols=111 Identities=8% Similarity=0.031 Sum_probs=79.8
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH-H-HHhhhhH-HHHHHHHHHhhcccCchhhHHHHH
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP-V-AAGHSIL-ALSIIRFIQGLGEGPIVPCTHALL 111 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~-~-~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i 111 (455)
..+.+.....+...++.+++++++||+| ..........+... . ....++. .+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666677888889999999999999 22222221221111 1 1112344 677788899999999999999999
Q ss_pred hcccCC-------CcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 112 AKWIPP-------TERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 112 ~e~~~~-------~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
+|..|. ++.|...+..+....+|..+|+.+++.+.+.
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999862 2346677888889999999999999998775
No 219
>KOG3762|consensus
Probab=98.09 E-value=8.7e-06 Score=77.71 Aligned_cols=141 Identities=17% Similarity=0.071 Sum_probs=111.8
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCch
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
.+|.+-.++..|........+-.+.-++.+++.+|+| +..++.+...+=.......+|. +.+-..+++|+..+..+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 4556667778888888888899999999999999999 2222222222222223334455 88999999999999999
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHh-hHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYA-GAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~-~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
.+..+++++..||+-|..+-++.+. ...+|-.+|.+|++.+.+. .+=|..|+..++.+++..+..
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~---fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER---FGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee---ehhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975 5788999999999999998 888999998888777644444
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.08 E-value=0.00014 Score=66.43 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=109.1
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHSILALSIIRF 94 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~~~~~~~~r~ 94 (455)
..+-.=+|++-.|-|+|..+.|++.+...+.....++....+++|.. ..+.......+......+.+....+..-+
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~ 304 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWAL 304 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 33444567788889999999999999999999999999999999877 22222222222222121222222222249
Q ss_pred HHhhcccCchhhHHHHHhcccCCC-cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 95 IQGLGEGPIVPCTHALLAKWIPPT-ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 95 l~G~~~~~~~~~~~~~i~e~~~~~-~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
+.|+|.|..++.+...+.+..++. +-++..+..|....+=...||.+.|++-+. ..+|+..........++..+..+
T Consensus 305 llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa--~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 305 LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA--TGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh--cCChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988643 444555555665555567889999999775 26899999888777777666655
Q ss_pred hh
Q psy3467 174 LY 175 (455)
Q Consensus 174 ~~ 175 (455)
..
T Consensus 383 ~a 384 (395)
T COG2807 383 RA 384 (395)
T ss_pred hc
Confidence 54
No 221
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.05 E-value=4.8e-05 Score=75.70 Aligned_cols=139 Identities=12% Similarity=0.002 Sum_probs=90.2
Q ss_pred hhHHHHHHHHHHHHhhhhh----HHHHhHHh---HHHHHHHHHHHHHHHHHhhhh---------H-HHHHHHHHHhhccc
Q psy3467 39 QGYVLSSFFYGYVLTQIPF----GILAKKYG---IGMLINSVFAFLVPVAAGHSI---------L-ALSIIRFIQGLGEG 101 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~----g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~---------~-~~~~~r~l~G~~~~ 101 (455)
.++..++..+...+..++. +++.||++ ...++..+..++........+ . +++..+++.|+|+.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 6677788887777777766 66666655 222222222222222211111 3 78889999999999
Q ss_pred CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcc----c---CCCCchhHHHhhHHHHHHHHHhhh
Q psy3467 102 PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG----F---AGGWPSIFYVFGLVGAVWSVAFLL 174 (455)
Q Consensus 102 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~----~---~~~wr~~f~~~~~~~~~~~i~~~~ 174 (455)
...|...+++.+..|++.||+.+|.+.....+|..++..+........ . ..+.++.|...++..++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888777777777766664322100 0 013567777777766654444444
Q ss_pred hcc
Q psy3467 175 YCY 177 (455)
Q Consensus 175 ~~~ 177 (455)
..|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 333
No 222
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.05 E-value=0.00021 Score=68.54 Aligned_cols=114 Identities=12% Similarity=-0.045 Sum_probs=72.6
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHH---HHHHHHHHHh-hhhH-HHHHHHHHHhhcc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSV---FAFLVPVAAG-HSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~---~~~~~~~~~~-~~~~-~~~~~r~l~G~~~ 100 (455)
.+++|.++++.++..+...++..++.++.|++.||+| .......+ ..+....... ..+. ...+.-.+.+.+.
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV 301 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4457889999999999999999999999999999999 22211111 1111111111 1122 3333444444444
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhh-HHHHHHHHHHHHH
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAG-AQFGTVFSLPLSG 143 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~-~~~G~~~g~~i~~ 143 (455)
+...+.....+.|..| ++|+++.+..... ..+|..+++.++.
T Consensus 302 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 302 SMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555666677778765 8899999887653 4566666666654
No 223
>KOG0569|consensus
Probab=98.04 E-value=0.00015 Score=70.35 Aligned_cols=151 Identities=15% Similarity=0.059 Sum_probs=106.0
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH---HH----HhhhhH---HHHHHHH
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP---VA----AGHSIL---ALSIIRF 94 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~---~~----~~~~~~---~~~~~r~ 94 (455)
+-++-|++..+..++.........+..+.+..+.||+| ..+.......+... .. ...+++ ..+++.+
T Consensus 296 i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 296 IFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 44567888999999999999999999999999999999 22222222222211 11 111112 1223333
Q ss_pred HHhhcccC-chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhh
Q psy3467 95 IQGLGEGP-IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 95 l~G~~~~~-~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~ 173 (455)
+-.++.+. ..|...-+.+|++|++.|..+.+......-+...+-...-..+.+. .|- +.|+...+++++..+..+
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~---~g~-~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV---IGP-YVFILFVIPLAIFLIYLY 451 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-hhhHHHHHHHHHHHHHHH
Confidence 33322222 3588899999999999999999999988888887777766666665 554 788888888888889999
Q ss_pred hhcccCCCC
Q psy3467 174 LYCYEEPEA 182 (455)
Q Consensus 174 ~~~~e~~~~ 182 (455)
+.+||++.+
T Consensus 452 ~~lPETkgr 460 (485)
T KOG0569|consen 452 RYLPETKGR 460 (485)
T ss_pred HhCcccCCC
Confidence 999998644
No 224
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.02 E-value=0.00021 Score=69.34 Aligned_cols=130 Identities=18% Similarity=0.139 Sum_probs=79.7
Q ss_pred HHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHH--HHHhh----hhH-HHHH----HHHHHhhcccCchhhHH
Q psy3467 43 LSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVP--VAAGH----SIL-ALSI----IRFIQGLGEGPIVPCTH 108 (455)
Q Consensus 43 ~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~--~~~~~----~~~-~~~~----~r~l~G~~~~~~~~~~~ 108 (455)
..+..+...+..+++|+++||+| +.+.......+... ..... .+. .+.+ .-+..|+|.| ..+
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng----svf 367 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG----STF 367 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch----HHH
Confidence 44556778899999999999999 22222222222211 11111 122 3333 3344455555 445
Q ss_pred HHHhcccCC---------------------CcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 109 ALLAKWIPP---------------------TERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 109 ~~i~e~~~~---------------------~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.++.+++|+ ++-|.+.|+......+|..+.|.+-+...+.. .++...|+...+..++
T Consensus 368 k~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~--g~~~~~~~~~~~~~~~ 445 (462)
T PRK15034 368 QMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT--GSPVGAMKVFLIFYIV 445 (462)
T ss_pred HhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc--CCcHHHHHHHHHHHHH
Confidence 556666653 15667788888889998888886666555431 5688888888888877
Q ss_pred HHHHhhhhccc
Q psy3467 168 WSVAFLLYCYE 178 (455)
Q Consensus 168 ~~i~~~~~~~e 178 (455)
+.++.+++.-+
T Consensus 446 ~~~~~w~~y~r 456 (462)
T PRK15034 446 CVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHhcc
Confidence 77777665433
No 225
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.92 E-value=0.0028 Score=60.98 Aligned_cols=167 Identities=9% Similarity=0.011 Sum_probs=107.2
Q ss_pred CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcc----cCCCCCCCCChhHH
Q psy3467 116 PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCY----EEPEAHPNIAEDER 191 (455)
Q Consensus 116 ~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~----e~~~~~~~~~~~~~ 191 (455)
+++.+.+.++.+.-.=-+..+++|++.|.+.+. .+.+....+.+...++..++=++++. ..|+-+.+.++++.
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~---~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~ 219 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTF---ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSES 219 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccc
Confidence 345667777777777778899999999999887 78888888888887776665554442 22221111111110
Q ss_pred HHHhhhcccccC------------CCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchh
Q psy3467 192 KYIMSSVWGLAG------------VASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGT 259 (455)
Q Consensus 192 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~ 259 (455)
+..++.....++ .-++...+|+.-+++|.+ ...+...+.++..-++......|+... |+++.+.|.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vf-las~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi 297 (432)
T PF06963_consen 220 ESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVF-LASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGI 297 (432)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHH
Confidence 000000000000 001123455566666544 444555555665656677788888885 999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 260 LSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 260 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.-+...+.++.+.+...++.+|+|..|.
T Consensus 298 ~R~~gav~Gl~gT~~~p~l~~riGlvr~ 325 (432)
T PF06963_consen 298 FRGLGAVFGLLGTWVYPWLMKRIGLVRA 325 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999997654
No 226
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.91 E-value=0.00083 Score=54.81 Aligned_cols=115 Identities=12% Similarity=0.084 Sum_probs=88.8
Q ss_pred ccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHH
Q psy3467 33 IWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHA 109 (455)
Q Consensus 33 ~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~ 109 (455)
++++..--.-.++......+..++.+.+.+++| ..++...+.-.....+.+.++. .++.+-.+.|++.+..++.-..
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344444444566777778888889999999999 4444444444434434444555 8999999999999999999999
Q ss_pred HHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh
Q psy3467 110 LLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE 147 (455)
Q Consensus 110 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~ 147 (455)
++.+..++++|++-.+++......+.++|.++...+.+
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999888776644
No 227
>PRK11462 putative transporter; Provisional
Probab=97.89 E-value=0.00055 Score=67.50 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=73.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHH-HHHHHHh-hhhH-HHHHHHHHHhhcccCchhhHHHH
Q psy3467 37 AEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAF-LVPVAAG-HSIL-ALSIIRFIQGLGEGPIVPCTHAL 110 (455)
Q Consensus 37 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~-~~~~~~~-~~~~-~~~~~r~l~G~~~~~~~~~~~~~ 110 (455)
...+.+.+.+.++..++.+++++++||+| ........... ....... ..+. .+.+.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888899999999999999999 22212221111 1111111 1222 34445566788777777777788
Q ss_pred HhcccC-------CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 111 LAKWIP-------PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 111 i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
++|..+ +++.|...+.......+|..+++.+++.+.+.
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876 33345556777788999999999999888764
No 228
>KOG3098|consensus
Probab=97.87 E-value=0.0016 Score=62.74 Aligned_cols=108 Identities=11% Similarity=0.040 Sum_probs=83.9
Q ss_pred hhHH-HHHHHHHHHHhhhhhHHHHhHHh--HHHHHHH-HHHHHHHHHHhhhhHHHHHHHHHHhhcccCchhhHHHHHhcc
Q psy3467 39 QGYV-LSSFFYGYVLTQIPFGILAKKYG--IGMLINS-VFAFLVPVAAGHSILALSIIRFIQGLGEGPIVPCTHALLAKW 114 (455)
Q Consensus 39 ~~~~-~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~-~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~e~ 114 (455)
.|+. .++-+..+.+..++.+.+.|+.| ..+...+ .........-+.+.+.+++...+.|+|.+..+..--.++.|.
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 3443 77888888899999999999999 3333333 333333333344555999999999999999999999999999
Q ss_pred cCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH
Q psy3467 115 IPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS 146 (455)
Q Consensus 115 ~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~ 146 (455)
.++|++.+..++.......+.++|..+...+.
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 99999999999999988888888877765543
No 229
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00029 Score=65.40 Aligned_cols=152 Identities=16% Similarity=0.185 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhhhhhcccCcc-cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHH-HHHHHHHHHHhhhh
Q psy3467 11 IFVSRVINTKLTRRVHHKDGS-FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINS-VFAFLVPVAAGHSI 86 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~-~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~-~~~~~~~~~~~~~~ 86 (455)
.|+.-.+.......++....| .|.++.+.+...+.+..+..+|.++...+..|+. ..+...+ +..+.+......++
T Consensus 245 ~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 245 IFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444444455555555444 7889999999999999999999999999999999 4444444 44555555666666
Q ss_pred HHHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHH
Q psy3467 87 LALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGA 166 (455)
Q Consensus 87 ~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~ 166 (455)
..-+..-++.|+..+..+|...+...+..+ + .....+..-....+|.++-|.+.|++.++ .|-...+.....++.
T Consensus 325 ~v~~~~l~~ig~F~simfPTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~---~g~~~~~~~~pllc~ 399 (422)
T COG0738 325 VVALYALFLIGLFNSIMFPTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADM---FGIQLTFLIVPLLCY 399 (422)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHh---hhhHHHHHHHHHHHH
Confidence 666677788899999999999999999998 3 34444555566778999999999999998 777777664444444
Q ss_pred H
Q psy3467 167 V 167 (455)
Q Consensus 167 ~ 167 (455)
+
T Consensus 400 l 400 (422)
T COG0738 400 L 400 (422)
T ss_pred H
Confidence 4
No 230
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.81 E-value=0.00057 Score=66.32 Aligned_cols=129 Identities=11% Similarity=-0.083 Sum_probs=86.8
Q ss_pred ccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCchhhHHH
Q psy3467 33 IWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIVPCTHA 109 (455)
Q Consensus 33 ~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 109 (455)
+.+....+...+.+..+..+|.++.+++.||++ ..........+........+....+..-.+.|++.+..+|...+
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~s 344 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYG 344 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555667777888999999999999999 32233333334444444444444467777888889999999999
Q ss_pred HHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc--CC-CCchhHHHhhH
Q psy3467 110 LLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF--AG-GWPSIFYVFGL 163 (455)
Q Consensus 110 ~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~--~~-~wr~~f~~~~~ 163 (455)
...+..+++.+. +.+...++ .+|..+.|.+.|.+.+... .. +-+..|++..+
T Consensus 345 l~~~~~g~~~~~-~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~ 399 (410)
T TIGR00885 345 IALKGLGQDTKY-GAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLL 399 (410)
T ss_pred HHHhhhhhhhhh-hHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHH
Confidence 999999755443 33333333 3999999999999988410 01 46777776443
No 231
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.79 E-value=0.00049 Score=67.28 Aligned_cols=112 Identities=17% Similarity=0.152 Sum_probs=89.3
Q ss_pred chhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh--hhH-HHHHHHHHHhhcccCchhhHHHH
Q psy3467 37 AEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH--SIL-ALSIIRFIQGLGEGPIVPCTHAL 110 (455)
Q Consensus 37 ~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~--~~~-~~~~~r~l~G~~~~~~~~~~~~~ 110 (455)
...+.+..+..++..++.+++++++||+| ....+..+..+......+. ++. .+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 56788888999999999999999999999 3333333333333333333 355 89999999999999999999999
Q ss_pred HhcccCC-------CcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 111 LAKWIPP-------TERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 111 i~e~~~~-------~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
++|..+. ++.|...+..+....+|..+++.+.+.+.+.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999973 3468889999999999999999999888764
No 232
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.78 E-value=0.00011 Score=52.02 Aligned_cols=64 Identities=22% Similarity=0.208 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 223 AILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+-..+++.+.....+..+.|.++++ .|+|+.|.|.+.++..+...++.++.|.++||.++++.
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 34456677788888889999999998 79999999999999999999999999999999999854
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.62 E-value=0.0021 Score=62.97 Aligned_cols=141 Identities=14% Similarity=0.033 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhh----------------------hHHHHHHH
Q psy3467 40 GYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHS----------------------ILALSIIR 93 (455)
Q Consensus 40 ~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~----------------------~~~~~~~r 93 (455)
.+....+.+...+.+++..++.+|+| ...+...+..++.....+.+ .+..++.-
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 44555566666677778888899997 21222222222222221111 13677888
Q ss_pred HHHhhcccCchhhHHHHHhcccCC--CcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPP--TERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~--~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
.+.|+..+.....-++++++..++ ++.|..+|+++.+..+.+++..+..+.+.+..+ .+-.+.+.+.++..++..+.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g-~~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG-GGNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC-CCCeeHHHHHHHHHHHHHHH
Confidence 999999999999999999999995 456999999999999999999988888655411 24577888888888888888
Q ss_pred hhhhcccCCC
Q psy3467 172 FLLYCYEEPE 181 (455)
Q Consensus 172 ~~~~~~e~~~ 181 (455)
.++.+|+.+.
T Consensus 467 ~~~~~~~~~~ 476 (477)
T TIGR01301 467 ALILLPRPRV 476 (477)
T ss_pred HHHhCCCCCC
Confidence 8888887653
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.62 E-value=0.0043 Score=58.23 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=110.3
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH-Hh------HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcc
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK-YG------IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGE 100 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr-~G------~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~ 100 (455)
.+-||++..|..-+......|..++-...|.+..| .+ ..+....+.......++...+. .+-..-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 35599999999999999999999999999998873 44 3333333333444445555555 8888999999999
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc-------ccCCCCchhHHHhhHHHHHHHHH
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY-------GFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~-------~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
|.......+.+.|..++++.|..+|.+.....+...++..+++.+.+. .+..++-.+|.+.++..++..++
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987652 12234566676666655553333
No 235
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.57 E-value=0.00034 Score=68.68 Aligned_cols=69 Identities=9% Similarity=0.197 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHh-hhccc
Q psy3467 219 LPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSM-ITSEK 287 (455)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~ 287 (455)
+.++.++.......+.++++..++|.|+++.+|+++.+++.+...+.....++.+++|+++||+ |||+.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 4566667777777888899999999999988999999999999999999999999999999999 98865
No 236
>KOG0637|consensus
Probab=97.56 E-value=0.0013 Score=62.17 Aligned_cols=251 Identities=13% Similarity=0.059 Sum_probs=139.6
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh----HHHHHHHHHHHHHHHHHhhh------------
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG----IGMLINSVFAFLVPVAAGHS------------ 85 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G----~~l~~~~~~~~~~~~~~~~~------------ 85 (455)
++..+++|++....+.+--.-.+...+.+++.|..+|| || ..........+...+..++.
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 44556788899888998889999999999999999996 55 11111111111111111111
Q ss_pred -----hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchh-HHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCch--
Q psy3467 86 -----IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSR-LGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPS-- 156 (455)
Q Consensus 86 -----~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~-~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~-- 156 (455)
.. .++++--+.=++.-..+..+.+++.|...+++|.+ +++.+.....+|..+|..++++ .+|+-
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y-------~~~~~~~ 208 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY-------LGLYKIF 208 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc-------cCceEEe
Confidence 11 34444444455666778889999999998776666 9999999999999999998874 34433
Q ss_pred hHHHhhHHHHHHHHHhhhhcccCCCC-----CCCCChhHHHHHhhhcccccCCCCCCCCC-----hhhhh-cChhHHHHH
Q psy3467 157 IFYVFGLVGAVWSVAFLLYCYEEPEA-----HPNIAEDERKYIMSSVWGLAGVASSPPVP-----WKDIV-SSLPFWAIL 225 (455)
Q Consensus 157 ~f~~~~~~~~~~~i~~~~~~~e~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~ 225 (455)
.|.....+-+.+..+-..+..|-+-. .......|++...+. .+.+.+....+ ...+. ..+..+.++
T Consensus 209 ~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~---~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~ 285 (498)
T KOG0637|consen 209 PFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG---TTARSKSSKLPFLLEIFGALKVMPRPMRMLL 285 (498)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc---ccccccccCcchHHHHhchHhhCChhHHHHH
Confidence 23332222222222222222211100 000000000000000 00000000000 01122 235678888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHH-HHhcCccccc----------------hhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 226 IAHMGQNYGYETLMTELPTFMK-QVLHFNIKEN----------------GTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~----------------g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
+...+.+........+.+.++- +.|+-|+... .+-+.++.+...+.+....++.||+|.|+
T Consensus 286 i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 286 IVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcce
Confidence 8888888888888777777763 3455443321 22333455566677777888899999554
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.54 E-value=0.0037 Score=60.25 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=86.7
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHh--hhhH-HHHHHHHHHhhcccCchh
Q psy3467 32 FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAG--HSIL-ALSIIRFIQGLGEGPIVP 105 (455)
Q Consensus 32 ~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~--~~~~-~~~~~r~l~G~~~~~~~~ 105 (455)
+|-++.+..+.......+...+.+++.++.+|+| ....+..+..+.....-+ .++. ..++..++.++|.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 4445556667777777788888999999999999 333333333333332222 3345 888888999999999999
Q ss_pred hHHHHHhcccC-------CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 106 CTHALLAKWIP-------PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 106 ~~~~~i~e~~~-------~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
...++++|..+ .++-|...+.+....=+|..++..+.++....
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999885 34457778888888889999999888887664
No 238
>KOG4332|consensus
Probab=97.49 E-value=0.0014 Score=57.41 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=70.1
Q ss_pred hhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhc
Q psy3467 23 RRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLG 99 (455)
Q Consensus 23 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~ 99 (455)
|.+-.+-+.++..+.+++.+.-.-.-..++...+.|-++||-| ......++.-+.+.+.-.++.+ .++++|.+-|+.
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHH
Confidence 4444456778888889988877777778888999999999999 4444444445555566777888 999999999999
Q ss_pred ccCchhhHHHH-Hhccc
Q psy3467 100 EGPIVPCTHAL-LAKWI 115 (455)
Q Consensus 100 ~~~~~~~~~~~-i~e~~ 115 (455)
.+..+.+.-+. ++|.-
T Consensus 138 TsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88777766654 55654
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=97.48 E-value=0.00066 Score=68.00 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccCccc-cc-ccchhhH-HHHHHHHHHHHhhhhhHHHH----hH-----Hh--HHHH
Q psy3467 4 VQHTAYSIFVSRVINTKLTRRVHHKDGSF-IW-TTAEQGY-VLSSFFYGYVLTQIPFGILA----KK-----YG--IGML 69 (455)
Q Consensus 4 v~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-s~~~~~~-~~s~~~l~~~~~~~~~g~l~----dr-----~G--~~l~ 69 (455)
.++.++..++.......+...+.++.+.+ |. ++++.+. ..+++.++..+|.+..|.+. .| +. ..+.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 45566666666555555555556666666 55 2232222 77888888888888888876 22 33 3333
Q ss_pred HHHHHHHHHHHHHhhhh-HHHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHH-HHHHHHhHh
Q psy3467 70 INSVFAFLVPVAAGHSI-LALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFS-LPLSGLLSE 147 (455)
Q Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g-~~i~~~l~~ 147 (455)
...+..+...+....-. -.+.+.-++.|++.|..+++....++|+|. |+-|+-.........+|..+- -.+.|.+.+
T Consensus 435 ~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd 513 (591)
T PTZ00207 435 IPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYT 513 (591)
T ss_pred HHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333 289999999999999999999999999999 999999999999999998776 556666654
Q ss_pred cccC--C--------CCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 148 YGFA--G--------GWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 148 ~~~~--~--------~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
.... . =.|..|++.+.+++...+......-+
T Consensus 514 ~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R 554 (591)
T PTZ00207 514 QQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQ 554 (591)
T ss_pred HHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeee
Confidence 3110 1 15778888888887766665544333
No 240
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.47 E-value=0.002 Score=63.87 Aligned_cols=138 Identities=13% Similarity=0.023 Sum_probs=96.4
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHHh-H---------HHHHHHHHHHHHH--------HHHh--hhhH-HHHHHHHHHh
Q psy3467 39 QGYVLSSFFYGYVLTQIPFGILAKKYG-I---------GMLINSVFAFLVP--------VAAG--HSIL-ALSIIRFIQG 97 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~g~l~dr~G-~---------~l~~~~~~~~~~~--------~~~~--~~~~-~~~~~r~l~G 97 (455)
.+++.+++.+...+.+++.+++.||+| . ...+..+..++.. .... ..+. .++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 466777788888899999999999997 1 2222222111111 1101 1234 6778899999
Q ss_pred hcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc-------CCCCchhHHHhhHHHHHHHH
Q psy3467 98 LGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF-------AGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 98 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~-------~~~wr~~f~~~~~~~~~~~i 170 (455)
+|.+...+...+++.+..|+|.++.+++++.....+|..++..++........ .....+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888876532100 01245677777766666555
Q ss_pred Hhhhhc
Q psy3467 171 AFLLYC 176 (455)
Q Consensus 171 ~~~~~~ 176 (455)
+.+...
T Consensus 471 ~~~~~~ 476 (489)
T PRK10207 471 VMALMV 476 (489)
T ss_pred HHHHHH
Confidence 554443
No 241
>KOG0253|consensus
Probab=97.44 E-value=0.00037 Score=63.79 Aligned_cols=125 Identities=14% Similarity=0.195 Sum_probs=85.4
Q ss_pred HHHHHHHhhhhhHHHHhHHh------HHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHhhcccCchhhHHHHHhcccCC
Q psy3467 46 FFYGYVLTQIPFGILAKKYG------IGMLINSVFAFLVPVAAGHSIL--ALSIIRFIQGLGEGPIVPCTHALLAKWIPP 117 (455)
Q Consensus 46 ~~l~~~~~~~~~g~l~dr~G------~~l~~~~~~~~~~~~~~~~~~~--~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~ 117 (455)
..+.-.-|.++.+.+.||+| ..++..+++......|...+.+ .+..+|++.. +.+.+.+.|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCcccch
Confidence 34455678899999999999 4444444554444444433333 5666676543 3455667889999999
Q ss_pred CcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 118 TERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 118 ~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
+-|+...|.-+....+|.++.|+++ ...+ .+-..+..+.+...++..+...++--|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA-~~~e----~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA-MRAE----LSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH-HHhc----cceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999999 3333 3444455566666666555555444443
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.36 E-value=0.00069 Score=48.48 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=42.7
Q ss_pred HHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh
Q psy3467 19 TKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG 65 (455)
Q Consensus 19 ~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G 65 (455)
-.+.|.+|.+++|.++|.++.|++.+.+++|+.+|++....+.++..
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~ 55 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR 55 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34567888999999999999999999999999999999999998765
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.27 E-value=0.002 Score=45.68 Aligned_cols=55 Identities=16% Similarity=0.045 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG 65 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G 65 (455)
.+........+.|.++...++.|+|..++|.+.++..+...++++++|.++||++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~ 63 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFG 63 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4445555666778888888899999999999999999999999999999999999
No 244
>KOG3342|consensus
Probab=97.22 E-value=0.0014 Score=50.96 Aligned_cols=88 Identities=76% Similarity=1.316 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHhhHHhcCCCCceEEEEEe------------------------------------------------
Q psy3467 306 SFGMIVSSALMIWKGLMVLTGSESPIVVVLRE------------------------------------------------ 337 (455)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 337 (455)
-.+.++.+..+.|.+..++++..+|+++++.+
T Consensus 25 n~~mivssA~MiwK~l~vvt~seSPiVVVLSgSMePaF~RGDlLfL~N~~~~p~~vGdivVf~vegR~IPiVHRviK~he 104 (180)
T KOG3342|consen 25 NFAMIVSSAYMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRNEDPIRVGDIVVFKVEGREIPIVHRVIKQHE 104 (180)
T ss_pred HHHHHHHHHHHHHhhheeeeCCCCCEEEEEcCCcCcccccccEEEEecCCCCcceeccEEEEEECCccCchhHHHHHHhc
Confidence 34556667789999999999999999887742
Q ss_pred --cCcccccccCCCCCccccccccCCCcccccccccccccccccceeeEEEEeccCCC
Q psy3467 338 --DGSVKFLTKGDNNSVDDRGLYAPGQLWLTKNDVVGRARGFLPYVGMVTIYMNEYPK 393 (455)
Q Consensus 338 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 393 (455)
.+.....++++++..|+...|+.+..|+.+....|.+-|++|..|+++.++++.|+
T Consensus 105 ~~~~~~~~LTKGDNN~~dD~~Ly~~gq~~L~r~~Ivg~~~G~~Py~G~itI~mnd~p~ 162 (180)
T KOG3342|consen 105 KSNGHIKFLTKGDNNAVDDRGLYAQGQNWLERKDIVGRVRGYLPYVGMITIWMNDYPK 162 (180)
T ss_pred ccCCcEEEEecCCCCcccchhcccccccceeccceeeEEeeccccceEEEEEecCCcc
Confidence 24456778888899999999999999999999999999999999999999999776
No 245
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.22 E-value=0.13 Score=50.55 Aligned_cols=174 Identities=15% Similarity=0.145 Sum_probs=98.8
Q ss_pred hHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh-c-----ccCCCCchhHHH-hhHHHH--HHHHHhhhhc
Q psy3467 106 CTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE-Y-----GFAGGWPSIFYV-FGLVGA--VWSVAFLLYC 176 (455)
Q Consensus 106 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~-~-----~~~~~wr~~f~~-~~~~~~--~~~i~~~~~~ 176 (455)
.-..+..|.++.+|-.+..+++..+.++|.+++..+...+.+ . .....|...... .+++.+ +..+.....+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~ 243 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYM 243 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888999999999999999999999999999988888877 1 011345433321 111111 1122222333
Q ss_pred ccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccc
Q psy3467 177 YEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKE 256 (455)
Q Consensus 177 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 256 (455)
.+...+++...+++++ ++.++.+..-.++++.++|+|.+..+++...+.....+.+....-...++.+. |+.+
T Consensus 244 ~~~vl~~~~~~~~~~~------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ 316 (491)
T PF03219_consen 244 NKNVLTDPRFYPSAKK------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPND 316 (491)
T ss_pred HHHccCccccchhhhc------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchH
Confidence 3221111111000000 00001112223556677888888888887777777766666555555555443 3332
Q ss_pred ----chhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 257 ----NGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 257 ----~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.|...+..++...+..++++.+.+|+|-+.
T Consensus 317 ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 317 YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 234445556666666677888888887653
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.20 E-value=0.014 Score=58.52 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=81.3
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHH--hhhhH-HHHHHHHHHhhcccCchhhHHHH
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAA--GHSIL-ALSIIRFIQGLGEGPIVPCTHAL 110 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~--~~~~~-~~~~~r~l~G~~~~~~~~~~~~~ 110 (455)
+.++....+.++..+++.+.|.+..+.+ ..++.....+++....+ ..++. ..++.-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 5788888999999999999999998888 33333333333322222 22344 77788999999999988888888
Q ss_pred HhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHH
Q psy3467 111 LAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGL 144 (455)
Q Consensus 111 i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~ 144 (455)
..-..|+++-+.+.++..+.-.+|..+|..+-..
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 8888899999999999999888888888766543
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.18 E-value=0.11 Score=49.52 Aligned_cols=132 Identities=10% Similarity=-0.006 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCC
Q psy3467 42 VLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPP 117 (455)
Q Consensus 42 ~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~ 117 (455)
+.-+-.+-..+..+.+.+..+|.. +..........+....+++++. .=+++-.+.+++.|........+.+ .+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 444455556666777778888887 4555555555666666766777 7788889999999988887777654 5543
Q ss_pred CcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCC
Q psy3467 118 TERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEP 180 (455)
Q Consensus 118 ~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~ 180 (455)
...+-++.+.+.+.++|+..-..+.+.+ .+-|..+.+...+.++..+..++.+|+++
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~lT~~g--~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGLTTLG--LSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHHHHhC--cCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3467778888888888877665554421 34477777777766664555555666443
No 248
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.17 E-value=0.0033 Score=60.59 Aligned_cols=51 Identities=8% Similarity=0.074 Sum_probs=43.5
Q ss_pred HHhhhhHHHHHHhcCcccc-chhhchhHHHHHHHHHHHHHHHHHHhhhcccc
Q psy3467 238 LMTELPTFMKQVLHFNIKE-NGTLSALPYLAMWIFSMFASFIADSMITSEKF 288 (455)
Q Consensus 238 ~~~~~~~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 288 (455)
...+...++.+++|+|+.| .|.+.+.+..++.+.++++|+++||+|.|+.+
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL 95 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL 95 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 3444444566679999999 99999999999999999999999999999763
No 249
>KOG2615|consensus
Probab=96.90 E-value=0.0088 Score=55.35 Aligned_cols=119 Identities=16% Similarity=0.239 Sum_probs=94.7
Q ss_pred CcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-----HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccC
Q psy3467 29 DGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-----IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGP 102 (455)
Q Consensus 29 ~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-----~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~ 102 (455)
.+.+|.++.|.|-+.+...+...+.+....+..||.. ..........-...+...+... .+..+-.+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999987 2222222222222233334444 777788888888888
Q ss_pred chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh
Q psy3467 103 IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE 147 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~ 147 (455)
..+....++....|.++||..+|+......++-++||+++|.+..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 889999999999999999999999999999999999999987743
No 250
>KOG0252|consensus
Probab=96.70 E-value=0.0012 Score=62.44 Aligned_cols=128 Identities=17% Similarity=0.121 Sum_probs=89.9
Q ss_pred HHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhh--------H-HHHHHHHHHhhcccCchhhHHHHHhcccCCC
Q psy3467 51 VLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSI--------L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT 118 (455)
Q Consensus 51 ~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~--------~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~ 118 (455)
..|-.+...++|+.| +-+.+..+.++.....+...+ . ...+..++.-+|-. .....+-+|.+|.+
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FPar 438 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPAR 438 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHH
Confidence 346677788899999 455555555555544444333 1 34444555555544 33455678999999
Q ss_pred cchhHHHHHHhhHHHHHHHHHHHHHHhHhcc--cCCCCchhHHHhhHHHHHHHHHhhhhcccCCCC
Q psy3467 119 ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYG--FAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEA 182 (455)
Q Consensus 119 ~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~--~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~ 182 (455)
-|+...|+.....-+|.+++...-..+.+++ ...+-|+++++.+.+.++ .++.-+++||+.++
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~-gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLL-GILFTLLIPETKGK 503 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHH-hHheeEEeeccccc
Confidence 9999999999999999999999888887711 116889999999988888 55555667787543
No 251
>KOG2563|consensus
Probab=96.67 E-value=0.012 Score=55.73 Aligned_cols=162 Identities=14% Similarity=0.054 Sum_probs=94.9
Q ss_pred HHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHH---HHHHHHHHHHHHHhhhhH--
Q psy3467 17 INTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGML---INSVFAFLVPVAAGHSIL-- 87 (455)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~---~~~~~~~~~~~~~~~~~~-- 87 (455)
+...++..+......-|.+....|++.....++.++++...|.+.||.. ..+. ...+.......+..-...
T Consensus 281 ~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~v 360 (480)
T KOG2563|consen 281 LFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSV 360 (480)
T ss_pred HHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceE
Confidence 3334444454444555667788999999999999999999999999999 2221 222221222222222222
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAV 167 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~ 167 (455)
.+...-.+.|.+.....|...-+-.|..-|..-+.-.|+......+=..+-..+-+...+.....+|....-+...+.++
T Consensus 361 iv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 440 (480)
T KOG2563|consen 361 IVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSAL 440 (480)
T ss_pred ehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHH
Confidence 55666677788888889999999888886665566666666554444444444445554432112455544333333333
Q ss_pred HHHHhhhhccc
Q psy3467 168 WSVAFLLYCYE 178 (455)
Q Consensus 168 ~~i~~~~~~~e 178 (455)
.......+.+|
T Consensus 441 l~~~lva~~r~ 451 (480)
T KOG2563|consen 441 LGAILVAFFRP 451 (480)
T ss_pred HHHHHHhhhhh
Confidence 33333334343
No 252
>PRK03612 spermidine synthase; Provisional
Probab=96.64 E-value=0.086 Score=52.60 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=80.4
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhhHHHHhH----Hh-HHHHHHHHH--H--HHHHHHHhhhhH--HHHHHHHHHhhcc
Q psy3467 32 FIWTTAEQGYVLSSFFYGYVLTQIPFGILAKK----YG-IGMLINSVF--A--FLVPVAAGHSIL--ALSIIRFIQGLGE 100 (455)
Q Consensus 32 ~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr----~G-~~l~~~~~~--~--~~~~~~~~~~~~--~~~~~r~l~G~~~ 100 (455)
+|-+....+.+.+++.+|.++|+.+.+++.++ +. +-+....+. . +........... .+...-++.++..
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55577788999999999999999999988643 22 111111111 0 010111111111 2334455667777
Q ss_pred cCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh-cccCCCCchhHHHhhHHHHHHHH
Q psy3467 101 GPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE-YGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 101 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~-~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
|...|....+..+... ++-+...|-......+|.++|.++.+++.- . .|-....++.+.+.++..+
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~---lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPR---LGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHH
Confidence 7778887777665432 345667788888899999999988887654 3 4544444444444444333
No 253
>KOG3574|consensus
Probab=96.53 E-value=0.19 Score=46.79 Aligned_cols=243 Identities=9% Similarity=0.068 Sum_probs=132.4
Q ss_pred hhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHh-----HHh-------HHHHHHHHHHHHHHHH-------
Q psy3467 21 LTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAK-----KYG-------IGMLINSVFAFLVPVA------- 81 (455)
Q Consensus 21 l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~d-----r~G-------~~l~~~~~~~~~~~~~------- 81 (455)
+...+|-+-+.-|.|.++.+...-++. - -...+.|.++.| |+| ......+..+......
T Consensus 49 L~~~iP~lL~ak~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ 126 (510)
T KOG3574|consen 49 LIGAIPLLLQAKGVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGG 126 (510)
T ss_pred HhhhhHHHhcCCCcchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCccccc
Confidence 333667666666777776654433221 1 234678899999 999 2222222222222111
Q ss_pred -HhhhhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc----ccCCCCc
Q psy3467 82 -AGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY----GFAGGWP 155 (455)
Q Consensus 82 -~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~----~~~~~wr 155 (455)
+..++. .+....++.-+..+.--.+.-...-.+.++++-|.+......+.+.|..++..+--.+... ....+|.
T Consensus 127 ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P 206 (510)
T KOG3574|consen 127 NGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIP 206 (510)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCc
Confidence 111222 3333345555555555566666666777889988888777777777777775543222210 0002332
Q ss_pred ---------hhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHH
Q psy3467 156 ---------SIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILI 226 (455)
Q Consensus 156 ---------~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (455)
...++.+.+.++...+..++-+|.++. .++++...+ .+.-.-.+++++-|.+..++.
T Consensus 207 ~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~---~~~e~~~~i-----------~~~yk~l~~vLklk~v~~la~ 272 (510)
T KOG3574|consen 207 LDQGFITLAGYLWFWGALFIVATTLVALLKKENDES---VDEELELGI-----------HESYKLLRDVLKLKSVRWLAG 272 (510)
T ss_pred CccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh---hhhhhhcCH-----------HHHHHHHHHHHcCccHHHHHH
Confidence 223444555555444444443333222 111110000 011112356677788888888
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 227 AHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
.....-.++.+.....+.-+.| .|.+.++-+++. +.....++..+...-|+..
T Consensus 273 i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~----v~~~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 273 ILLTGKLGFQAADALTSLKLLE-HGVPKEELALIA----VPLVPLQIALPLYIGKWTA 325 (510)
T ss_pred HHHHHHHHhhhhhhccchHHHH-cCCChhHheeee----eehhhHHHhhhhhheeecC
Confidence 8788888888878888888887 799998877765 4455556666666655544
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.48 E-value=0.012 Score=56.32 Aligned_cols=82 Identities=21% Similarity=0.251 Sum_probs=70.7
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCC---cchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPT---ERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLV 164 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~ 164 (455)
.+.++-.+.++|.|..-|...++.+|-++++ +|.....++..+.++|..+++.+.+++.++ .+|.+.|.+.++.
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~---~~~~~~f~i~~~~ 111 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQN---YGWFLGFGIPAIG 111 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC---S-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccc---cchhhhhhHHHHH
Confidence 6888888999999999999999999999865 477788899999999999999999999988 9999999998877
Q ss_pred HHHHHHHh
Q psy3467 165 GAVWSVAF 172 (455)
Q Consensus 165 ~~~~~i~~ 172 (455)
.++..+..
T Consensus 112 ~~~~~~~f 119 (372)
T PF00854_consen 112 MLLALIVF 119 (372)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77644443
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.43 E-value=0.018 Score=41.28 Aligned_cols=53 Identities=17% Similarity=0.211 Sum_probs=43.9
Q ss_pred HHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhc
Q psy3467 232 NYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITS 285 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 285 (455)
..++......+|...++ .++|..+.+++.+.+.++|.+|.+...++.++..++
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 34555666778877777 799999999999999999999999999988875544
No 256
>KOG0254|consensus
Probab=96.19 E-value=0.12 Score=51.92 Aligned_cols=147 Identities=13% Similarity=0.049 Sum_probs=83.1
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhh-------------hhH-H-HHH
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGH-------------SIL-A-LSI 91 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~-------------~~~-~-~~~ 91 (455)
+..+.+... .+...+......++..+...+.||+| ..+.+.....++....+.. ..+ . ...
T Consensus 323 ~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (513)
T KOG0254|consen 323 KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFL 401 (513)
T ss_pred HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHH
Confidence 334444332 44555566666677777799999999 3333333333222222110 011 1 222
Q ss_pred HHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHH-
Q psy3467 92 IRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSV- 170 (455)
Q Consensus 92 ~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i- 170 (455)
.-++..+. ....+....+.+|.+|.+-|+++.++......+...+-...-....+. .++...|...+..+.+..+
T Consensus 402 ~~~v~~f~-~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~---~~~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 402 CLFIFSFA-IGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA---LGIGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHh-cccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchHHHHHHHHHHHHHH
Confidence 22233332 234466668899999999999999888776555554443333333333 3356677777777766566
Q ss_pred HhhhhcccCCC
Q psy3467 171 AFLLYCYEEPE 181 (455)
Q Consensus 171 ~~~~~~~e~~~ 181 (455)
..++++||+..
T Consensus 478 fv~~~~pETkg 488 (513)
T KOG0254|consen 478 FVFFFVPETKG 488 (513)
T ss_pred HheEEcccCCC
Confidence 67788888743
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.16 E-value=0.0001 Score=72.53 Aligned_cols=151 Identities=14% Similarity=0.002 Sum_probs=90.8
Q ss_pred cccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHH-----h-hh----hHHHHHH
Q psy3467 26 HHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAA-----G-HS----ILALSII 92 (455)
Q Consensus 26 ~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~-----~-~~----~~~~~~~ 92 (455)
+.+.++.+.++. -+......+...++.+....+.||+| ..+.......+...... . .+ +...++.
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 445555666555 22222333445566677779999999 22222222222211111 1 11 1222222
Q ss_pred HHHHhhccc-CchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 93 RFIQGLGEG-PIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 93 r~l~G~~~~-~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
-.+...+.+ ...+....+..|.+|.+.|++..++......++..+++.+...+.+. .+-...+.+.+.++++..+.
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~---~~~~~~~~i~~~~~~i~~i~ 431 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN---LGGWGVFLIFAGVCLIAIIF 431 (451)
T ss_pred eeecccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccchhhHHHHHHHHhh
Confidence 222211212 34466678889999999999999999999999999888887777665 44245566666777777788
Q ss_pred hhhhcccCCC
Q psy3467 172 FLLYCYEEPE 181 (455)
Q Consensus 172 ~~~~~~e~~~ 181 (455)
.++++||+..
T Consensus 432 ~~~~lpET~g 441 (451)
T PF00083_consen 432 VYFFLPETKG 441 (451)
T ss_pred eeEEEeeCCC
Confidence 8899999854
No 258
>KOG0255|consensus
Probab=96.06 E-value=0.22 Score=50.14 Aligned_cols=132 Identities=15% Similarity=0.061 Sum_probs=82.7
Q ss_pred HHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-H---HHHHHHHHhhcccCchhhHHHHHhcccCCCcch
Q psy3467 49 GYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-A---LSIIRFIQGLGEGPIVPCTHALLAKWIPPTERS 121 (455)
Q Consensus 49 ~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~---~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~ 121 (455)
.........+...||+| .......+..++.......... . ..+...+...+.+..+.....+.+|.+|...|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 44455555578899998 2222222222333322222221 2 344444444555556666799999999999999
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCC
Q psy3467 122 RLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHP 184 (455)
Q Consensus 122 ~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~ 184 (455)
.+.+..+....+|.+++|.+....... .....+...+..+.+...+...++||+...+-
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQM----FPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh----cccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 999999999999999999998665442 11222222355666656677788999865543
No 259
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.03 E-value=1.6 Score=42.35 Aligned_cols=173 Identities=12% Similarity=0.002 Sum_probs=89.6
Q ss_pred hHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccC-------CCCchhHHHhhHHHHHHHHHhhhhccc
Q psy3467 106 CTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFA-------GGWPSIFYVFGLVGAVWSVAFLLYCYE 178 (455)
Q Consensus 106 ~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~-------~~wr~~f~~~~~~~~~~~i~~~~~~~e 178 (455)
.-.....|.+..+|-.|.+++++.+.+++..++..+..++.++.+. ..-+..+.+.+..++++..+..+.-+.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~ 247 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRN 247 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3446678888889999999999999999999999998888764100 002334444444444433333332222
Q ss_pred CCCCCCCCChhHHHHHhhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccch
Q psy3467 179 EPEAHPNIAEDERKYIMSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENG 258 (455)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 258 (455)
..+++....+..++ ++.++.+-.-.++.+.+.|+|-++.+.+...+.+...+.+-..--.-.++.+..+.+...
T Consensus 248 il~~~~f~~~~~~k------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~ 321 (509)
T COG3202 248 VLTDPLFYLRAKKK------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTA 321 (509)
T ss_pred cccCcchhHHHhcc------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHH
Confidence 22222111011100 000000112234456677888888877777776666655543333333332333333333
Q ss_pred hhc---hhHHHH-HHHHHHHHHHHHHHhhh
Q psy3467 259 TLS---ALPYLA-MWIFSMFASFIADSMIT 284 (455)
Q Consensus 259 ~~~---~~~~~~-~~~~~~~~g~l~dr~g~ 284 (455)
+.. ...++. .++...+++.+.+|.|-
T Consensus 322 f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 322 FMGRFQIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 322 223333 33344566777777664
No 260
>KOG3810|consensus
Probab=95.96 E-value=0.081 Score=48.51 Aligned_cols=195 Identities=14% Similarity=0.088 Sum_probs=108.8
Q ss_pred hhH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhH
Q psy3467 85 SIL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGL 163 (455)
Q Consensus 85 ~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~ 163 (455)
++. .+=+..+.-|...+ ...+-++++-+..+|+++.++.+..-.+.-.|..+|..++..+...+. .+.+..=.+...
T Consensus 93 ~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~-~sy~~LN~ISL~ 170 (433)
T KOG3810|consen 93 PSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLET-LSYTTLNYISLA 170 (433)
T ss_pred CCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcc-cchhhhchhhHH
Confidence 444 66777788887765 567788999999999999999999999999999999999988876410 222332223222
Q ss_pred HHHHHHHHhhhhcccCCCCCCCCChhHHHHHhhhcccccCCCCC----------CCCChhhhhcChhHHHHHHHHHHHHH
Q psy3467 164 VGAVWSVAFLLYCYEEPEAHPNIAEDERKYIMSSVWGLAGVASS----------PPVPWKDIVSSLPFWAILIAHMGQNY 233 (455)
Q Consensus 164 ~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (455)
+.........++|..++..-...++++.. ..+.++...+.+. -..+..+..+||++..-.+-..+..+
T Consensus 171 -~~~ia~~~A~fLP~v~rSl~f~~~~~~~~-v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~sc 248 (433)
T KOG3810|consen 171 -EVTIAVLLALFLPRVKRSLYFHRLEDKIS-VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASC 248 (433)
T ss_pred -HHHHHHHHHhhCCCCchhhhhhcccccce-eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhc
Confidence 22223444456665542211111111100 0000000000000 01233455678887777777777777
Q ss_pred HHHHHHhhhhHHHHHHhcCc--cccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 234 GYETLMTELPTFMKQVLHFN--IKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 234 ~~~~~~~~~~~~~~~~~g~s--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
+++.+..+....-++. .-+ ..-+|..=....+.++++.+..|.+--++.|
T Consensus 249 g~~QV~nY~Q~LW~~~-~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r 300 (433)
T KOG3810|consen 249 GYYQVTNYTQILWKEV-APNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR 300 (433)
T ss_pred hhHHHHHHHHHHHHhh-CCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence 8887777776666553 211 1122333334445556666666666544443
No 261
>KOG1330|consensus
Probab=95.89 E-value=0.017 Score=54.92 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q psy3467 219 LPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEKFSH 290 (455)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 290 (455)
..+..+++...+++...+.+....+..-+. +|.++...|++...+.+...++++++|++.||+.|++++..
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~-fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTY-FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 345667777788888888877766665544 89999999999999999999999999999999999988433
No 262
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.72 E-value=0.043 Score=48.25 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=60.3
Q ss_pred CcchhHHHHHHhhHHHHHHHHHHHHHHh---HhcccCCCCchhHHHhhHHHHHHHHHhhhhcccCCCCCCCCChhHHHHH
Q psy3467 118 TERSRLGAFVYAGAQFGTVFSLPLSGLL---SEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEEPEAHPNIAEDERKYI 194 (455)
Q Consensus 118 ~~r~~~~~~~~~~~~~G~~~g~~i~~~l---~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~~~~~~~~~~~~~~~~ 194 (455)
|+|+........+.++|.++....--.- .+. ....|++++.+.+++.++.+++..++=.|-....+. +++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~-~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~-- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIA-LTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE-- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc--
Confidence 5677777777888888887764432111 111 114799999998888877666666653332111111 011110
Q ss_pred hhhcccccCCCCCCCCChhhhhcChhHHHHHHHHHHH
Q psy3467 195 MSSVWGLAGVASSPPVPWKDIVSSLPFWAILIAHMGQ 231 (455)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (455)
+.+.+++.+.++.+|++..|...+.+...
T Consensus 78 --------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 78 --------NSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred --------cccccccchHHHHHccchHHHHHHHHHHH
Confidence 00133457789999999988877765543
No 263
>KOG2816|consensus
Probab=95.64 E-value=0.4 Score=47.01 Aligned_cols=119 Identities=17% Similarity=0.145 Sum_probs=90.6
Q ss_pred cCcccccccchhhHHHHHHHHHHHHhhhhhH-HHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccC
Q psy3467 28 KDGSFIWTTAEQGYVLSSFFYGYVLTQIPFG-ILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGP 102 (455)
Q Consensus 28 ~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g-~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~ 102 (455)
....+++++.+.+...+.......+++.+.. .+...+| ...++...-.+.....++++.. ++.....+.++. ..
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~ 346 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GI 346 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cc
Confidence 4567899999999988888888888888888 5666677 3333333333444445555555 667777776664 56
Q ss_pred chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh
Q psy3467 103 IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE 147 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~ 147 (455)
..|...+.+..+.++|++|+..++.+....+...++|.+-+.+..
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 889999999999999999999999999999999999888776643
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.95 E-value=0.33 Score=47.03 Aligned_cols=137 Identities=20% Similarity=0.202 Sum_probs=95.7
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHhHHh-------------HHHHHHHHHHHHHHHH--Hhh-----hhH-HHHHHHHHH
Q psy3467 38 EQGYVLSSFFYGYVLTQIPFGILAKKYG-------------IGMLINSVFAFLVPVA--AGH-----SIL-ALSIIRFIQ 96 (455)
Q Consensus 38 ~~~~~~s~~~l~~~~~~~~~g~l~dr~G-------------~~l~~~~~~~~~~~~~--~~~-----~~~-~~~~~r~l~ 96 (455)
..++.++.+.+...+.+++...+--|.+ ..+..++...+..... ... .+. +++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 4578889999999888888888777644 3333333222222222 111 233 888899999
Q ss_pred hhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHH------hHhcccCCCCchhHHHhhHHHHHHHH
Q psy3467 97 GLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGL------LSEYGFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 97 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~------l~~~~~~~~wr~~f~~~~~~~~~~~i 170 (455)
++|+=...|.+.+++....|++-.+.+++.+-.....|..++..+++. ..+. ..-...|+..+...++..+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~---~~~~~~F~~~g~v~i~~~~ 481 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTA---FIEGRVFGTIGVVAIVIGI 481 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhh---hhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999888999988888888888887777763 1122 3456677777777776666
Q ss_pred Hhhhhcc
Q psy3467 171 AFLLYCY 177 (455)
Q Consensus 171 ~~~~~~~ 177 (455)
......|
T Consensus 482 ~~~~~~~ 488 (498)
T COG3104 482 LLLLLSP 488 (498)
T ss_pred HHHHhhH
Confidence 5554443
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.45 E-value=0.67 Score=44.20 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhhhhhcccCcccccccchhhHHHHHHHHHHHHhhhhhHHH-HhHHh---HHHHHHHHHHHHHHHHHhhhh
Q psy3467 11 IFVSRVINTKLTRRVHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGIL-AKKYG---IGMLINSVFAFLVPVAAGHSI 86 (455)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l-~dr~G---~~l~~~~~~~~~~~~~~~~~~ 86 (455)
.+....++..+.+.+..- .++.-...+..+...+|.+|..++.--...+ ..|.- +......+..+......+.++
T Consensus 256 Y~aEY~InqGv~~tl~fp-~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~rir~lwils~LQ~~nl~~~~l~s~~~fips 334 (402)
T PF02487_consen 256 YFAEYFINQGVAPTLLFP-NSFFSPRDQYRWYQLLYQLGVFISRSSLPFFRIRRLWILSLLQVINLVFLLLQSWYRFIPS 334 (402)
T ss_pred HHHHHHHHhchHHHhcCC-ccCCCHHHHHHHHHHHHHHHHhhhhcceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 344444555555544221 2233345577777777777765553322211 01111 222233333333334444455
Q ss_pred H-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH
Q psy3467 87 L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS 146 (455)
Q Consensus 87 ~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~ 146 (455)
. ..++.-+..|+..|..+......+.|-.++++|-.+++..+.+-++|..++.+++-.+.
T Consensus 335 i~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5 67778899999999999999999999999999999999999999999999998887653
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.33 E-value=0.19 Score=49.05 Aligned_cols=115 Identities=10% Similarity=0.010 Sum_probs=78.2
Q ss_pred cccchhhHHHHHHHHHHHHhhhhhHHHHhHHh-HHHHHHH--HHHHHHHHHH-----------hhhhHHHHHHHHHHhhc
Q psy3467 34 WTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG-IGMLINS--VFAFLVPVAA-----------GHSILALSIIRFIQGLG 99 (455)
Q Consensus 34 ~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G-~~l~~~~--~~~~~~~~~~-----------~~~~~~~~~~r~l~G~~ 99 (455)
.|+...+.+..+..++..++..+....--+.. ..++... +..+...... ..+.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888888888888888888888777666666 2222222 2221111100 01111222333555555
Q ss_pred ccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 100 EGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 100 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
....+.....+++|..|+..-|..++++....++|..++..++..+.+.
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~ 380 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL 380 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777788999999999999999999999999999999999988775
No 267
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.09 E-value=0.24 Score=45.97 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=35.6
Q ss_pred HhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 249 VLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 249 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
.+|++..|.+.++........+...+.|.++||+|||+.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~ 101 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA 101 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 489999999999999888899999999999999999965
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.96 E-value=0.021 Score=57.15 Aligned_cols=51 Identities=12% Similarity=0.275 Sum_probs=0.0
Q ss_pred cHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceeee
Q psy3467 400 PWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSVR 450 (455)
Q Consensus 400 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~~ 450 (455)
..+.+++++.+....++..+.....-++.|.+|+|++++++++-.+..++.
T Consensus 297 ~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~ 347 (539)
T PF03137_consen 297 ALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLT 347 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 345689999999999999999999999999999999999999987766654
No 269
>KOG1237|consensus
Probab=92.56 E-value=3 Score=42.14 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=99.5
Q ss_pred hcccCcccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHH---HHHHHh--------------
Q psy3467 25 VHHKDGSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFL---VPVAAG-------------- 83 (455)
Q Consensus 25 ~~~~~~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~---~~~~~~-------------- 83 (455)
+.-+.+++|.+...+.-..+.+.-..-...+..+.++|-|- ...+...+..++ ....+.
T Consensus 61 v~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~ 140 (571)
T KOG1237|consen 61 VTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPG 140 (571)
T ss_pred HHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCC
Confidence 34445667777777888888888888888899999999755 111111111111 111100
Q ss_pred ------hhh--H-HHHHHHHHHhhcccCchhhHHHHHhcccC---CC---cchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 84 ------HSI--L-ALSIIRFIQGLGEGPIVPCTHALLAKWIP---PT---ERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 84 ------~~~--~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~---~~---~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
.+. . .+....-+..+|.|+.-+...+.-+|-++ ++ ++...+.++....++|..++..+-.++-+.
T Consensus 141 ~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~ 220 (571)
T KOG1237|consen 141 GNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN 220 (571)
T ss_pred CCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc
Confidence 011 1 56666777788999999999999999998 32 233677888899999999999888888777
Q ss_pred ccCCCCchhHHHhhHHHHHHHHH
Q psy3467 149 GFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 149 ~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
.+|.+.|.+......+..++
T Consensus 221 ---~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 221 ---VGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred ---ccceeeccHHHHHHHHHHHH
Confidence 89999998877766653433
No 270
>KOG3626|consensus
Probab=92.21 E-value=3.9 Score=42.12 Aligned_cols=49 Identities=14% Similarity=0.246 Sum_probs=42.7
Q ss_pred HHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhccccccceee
Q psy3467 401 WKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGSV 449 (455)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~~ 449 (455)
.+.+++++-....+++..+....+.++.|.+|+|+++++|.+-.+.-++
T Consensus 385 ~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l 433 (735)
T KOG3626|consen 385 IKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANIL 433 (735)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHH
Confidence 3468899999999999999999999999999999999999987665444
No 271
>KOG3097|consensus
Probab=91.88 E-value=10 Score=34.98 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=45.3
Q ss_pred HHHHHHHhhhhhHHHHhHHh--HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhccc
Q psy3467 46 FFYGYVLTQIPFGILAKKYG--IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWI 115 (455)
Q Consensus 46 ~~l~~~~~~~~~g~l~dr~G--~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~ 115 (455)
..+..+..+++.+.+..++| ..+......-........-+.+ .++-.-...|++.+..+..--+++++.-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34455566666668999999 3333333333333444455566 8999999999999988766655555544
No 272
>KOG3762|consensus
Probab=91.71 E-value=0.15 Score=49.63 Aligned_cols=57 Identities=23% Similarity=0.248 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 230 GQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
+.......+...++.|.++ +|+++.+.|.+...--+.++++.++.|.++||+.+||.
T Consensus 22 ~~~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~ 78 (618)
T KOG3762|consen 22 FFGARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRP 78 (618)
T ss_pred eeeecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 3344455567788888888 89999999999999999999999999999999999875
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.35 E-value=3.2 Score=40.33 Aligned_cols=115 Identities=14% Similarity=0.050 Sum_probs=79.0
Q ss_pred cccccccchhhHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHH------HHHHHHHHHHhhh----hH-HHHHHHHH
Q psy3467 30 GSFIWTTAEQGYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINS------VFAFLVPVAAGHS----IL-ALSIIRFI 95 (455)
Q Consensus 30 ~~~~~s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~------~~~~~~~~~~~~~----~~-~~~~~r~l 95 (455)
+.-|+++..+|..-+.-.+....+.+....+.+|+| .++.... ..++...+....+ +. .++.+-.+
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 345899999999999999999999999999999999 2222211 1122222222111 12 44444444
Q ss_pred HhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHH
Q psy3467 96 QGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGL 144 (455)
Q Consensus 96 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~ 144 (455)
.=+|.=..-....-++-|..|++|||...+.-....++-..+-..++-.
T Consensus 366 SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 366 SRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4444444567778889999999999999999988888877777666543
No 274
>KOG3098|consensus
Probab=91.26 E-value=4.9 Score=39.23 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=48.6
Q ss_pred hH-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 86 IL-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 86 ~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
++ ..++.-++.|++-+......+.++++.. +++|..+.++.-.-..++.+++-......
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 35 7778889999999999999999999999 68899999998888888777765555433
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.66 E-value=5.4 Score=39.05 Aligned_cols=175 Identities=10% Similarity=0.083 Sum_probs=94.0
Q ss_pred HHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc----------ccCCCC---chhHHHhhHHHHHHHHHhh
Q psy3467 107 THALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY----------GFAGGW---PSIFYVFGLVGAVWSVAFL 173 (455)
Q Consensus 107 ~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~----------~~~~~w---r~~f~~~~~~~~~~~i~~~ 173 (455)
.-...-...++++++.+......+.++|..++..+--.+... ..+.|. ..-..+.+.+.++..+...
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~ 218 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVA 218 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHh
Confidence 334444556788898888877777777777776554333220 000111 1122344555555566666
Q ss_pred hhcccCCCCCCCC--Ch---hHHHHHhhhcccccCC--CCCCCCC-------hhhhhcChhHHHHHHHHHHHHHHHHHHH
Q psy3467 174 LYCYEEPEAHPNI--AE---DERKYIMSSVWGLAGV--ASSPPVP-------WKDIVSSLPFWAILIAHMGQNYGYETLM 239 (455)
Q Consensus 174 ~~~~e~~~~~~~~--~~---~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (455)
++.+|.|..+... ++ .+.+..+...+.++.+ ..++..+ ..+++|-|.+..+.+.....-.++...-
T Consensus 219 ~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~d 298 (544)
T PF13000_consen 219 FFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQAND 298 (544)
T ss_pred eEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccch
Confidence 6677765432111 10 0000000000001111 0111112 2345667788877777777777776666
Q ss_pred hhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 240 TELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 240 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.....-+.| .|++.++.++. .+..+..+++.++++.|+.+.+
T Consensus 299 a~T~LKLlE-kG~~KE~LAl~----~li~~P~qii~~~~~~Kws~g~ 340 (544)
T PF13000_consen 299 AVTSLKLLE-KGLSKEDLALL----VLIDFPFQIILPYYIGKWSAGS 340 (544)
T ss_pred hhhHHHHHH-cCCCHHHhHHH----HHHhhhHHHHHHHHhhhhhcCC
Confidence 666666666 79999887555 4666777778888877776543
No 276
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=88.59 E-value=1.3 Score=39.44 Aligned_cols=56 Identities=14% Similarity=0.037 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 230 GQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
......+.+..|.|..- +++|+|.+|...+...-.++..+| ++.|.+.||.|++.+
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~ 68 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVV 68 (250)
T ss_pred HhcCcccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHH
Confidence 33344555666666655 459999999999988888888775 889999999998743
No 277
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=86.32 E-value=0.94 Score=35.57 Aligned_cols=28 Identities=21% Similarity=0.174 Sum_probs=23.5
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhhccc
Q psy3467 260 LSALPYLAMWIFSMFASFIADSMITSEK 287 (455)
Q Consensus 260 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 287 (455)
..+...++..+++++.+++.||++||+.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~ 30 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPV 30 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHH
Confidence 4456678889999999999999999864
No 278
>KOG1479|consensus
Probab=85.76 E-value=18 Score=34.60 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=20.8
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCc
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTE 119 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~ 119 (455)
..++.-.+.+.+.|..+.......++ +|+|.
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 56666777788888777776666655 45454
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.62 E-value=11 Score=36.90 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=31.4
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHH
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPL 141 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i 141 (455)
..++.-++.|++.+..+.....+.+ .+|++. +..+..+.+++.+++.++
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHH
Confidence 6666777889998888887777766 456443 444455555555554443
No 280
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=84.34 E-value=19 Score=32.06 Aligned_cols=25 Identities=4% Similarity=-0.346 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHH
Q psy3467 225 LIAHMGQNYGYETLMTELPTFMKQV 249 (455)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (455)
.+...+.....++....=..|.+++
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333444455555555555566663
No 281
>KOG4332|consensus
Probab=83.22 E-value=5 Score=35.85 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhHHh--------HHHHHHHHHHHHHHHHHh-----hhhH-HHHHHHHHHhhcccCch
Q psy3467 39 QGYVLSSFFYGYVLTQIPFGILAKKYG--------IGMLINSVFAFLVPVAAG-----HSIL-ALSIIRFIQGLGEGPIV 104 (455)
Q Consensus 39 ~~~~~s~~~l~~~~~~~~~g~l~dr~G--------~~l~~~~~~~~~~~~~~~-----~~~~-~~~~~r~l~G~~~~~~~ 104 (455)
-|.+.+.++++.++|+-+..++..|-. +.+..... ........+ -.+. .-+++..+.-.+.|..+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a-~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIA-ALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHH-HHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 488999999999999999988877655 11111111 111111111 1122 22344444455677889
Q ss_pred hhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc-ccCCCCchhHHHhhHHHHHHHH
Q psy3467 105 PCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY-GFAGGWPSIFYVFGLVGAVWSV 170 (455)
Q Consensus 105 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~-~~~~~wr~~f~~~~~~~~~~~i 170 (455)
|....+=.++.|+++|+..+.++-.-.++=.+++- +-.+. ....+-|..|-+..+...+..+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvL----ynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVL----YNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhh----eecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999999998888765554333221 11110 0013556777666655544333
No 282
>KOG4830|consensus
Probab=79.93 E-value=3.6 Score=36.41 Aligned_cols=54 Identities=13% Similarity=0.170 Sum_probs=39.4
Q ss_pred CCCCCcHHHHHhhHHHHHHHHHHhcchhhHHHHHhhhhHHHHHhhcccccccee
Q psy3467 395 KSPPVPWKDIVSSLPFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKEHGS 448 (455)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~P~y~~~~~~~~~~~~g~ 448 (455)
+....||..-|++...+.+.+.|+-.......=-.++|.|-.+.++++-+..++
T Consensus 188 ~~~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAl 241 (412)
T KOG4830|consen 188 ELVRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKAL 241 (412)
T ss_pred hhhcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhh
Confidence 334578988899999999888888777766667778888777766665444333
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=77.87 E-value=45 Score=32.68 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhH
Q psy3467 85 SILALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLS 146 (455)
Q Consensus 85 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~ 146 (455)
+++..++.-++.|+..|-....+..+..+..+++||..+..+...+..+|..+|..++-.+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477778999999999999999999999999999999999999999999999998875543
No 284
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=74.95 E-value=62 Score=32.57 Aligned_cols=33 Identities=12% Similarity=0.287 Sum_probs=22.4
Q ss_pred CccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 252 FNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 252 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
.++...|.+.....+.++++++++|+.+-|+-+
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456656666677777777777777777766544
No 285
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=73.88 E-value=5.4 Score=41.23 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=39.8
Q ss_pred HHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHh-hhcc
Q psy3467 235 YETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSM-ITSE 286 (455)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~ 286 (455)
++++...+..|+.+.+|++..++..+...+.....+..+++|+++|++ |+++
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~ 55 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK 55 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 345566667777777899988888888777777778888999999975 5554
No 286
>KOG2325|consensus
Probab=73.87 E-value=1.9 Score=42.22 Aligned_cols=81 Identities=11% Similarity=0.177 Sum_probs=65.7
Q ss_pred HHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHH
Q psy3467 92 IRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVA 171 (455)
Q Consensus 92 ~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~ 171 (455)
.-++.|++.-.......++-+|...|++++.+.+.++.....+..++|++.....+. .|.|+...+.+...++...+
T Consensus 394 ~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~---~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 394 FIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL---SGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred hhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh---cCccHHHHHHHHHHHHHHHH
Confidence 345667777777778889999999999999999999999999999999999998888 88898887776665554444
Q ss_pred hhhh
Q psy3467 172 FLLY 175 (455)
Q Consensus 172 ~~~~ 175 (455)
+..+
T Consensus 471 ~~~~ 474 (488)
T KOG2325|consen 471 WIVF 474 (488)
T ss_pred HHHH
Confidence 4333
No 287
>KOG3880|consensus
Probab=70.00 E-value=23 Score=32.58 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHHh---HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHHHHHhccc
Q psy3467 40 GYVLSSFFYGYVLTQIPFGILAKKYG---IGMLINSVFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTHALLAKWI 115 (455)
Q Consensus 40 ~~~~s~~~l~~~~~~~~~g~l~dr~G---~~l~~~~~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~ 115 (455)
|.+.-.-.+-..+..+......||+- +..+.....+....+.+++++. +=+.+-.+..++.|.-...-..+-+ .+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cC
Confidence 44444445555666777777888877 3333333444444556667766 7777777777777765554444332 23
Q ss_pred CCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHhhhhcccC
Q psy3467 116 PPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAFLLYCYEE 179 (455)
Q Consensus 116 ~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~~~~~~e~ 179 (455)
+ ....+.++.+.+....+|..-=..+.+. ...+-|...++...+.++.....++.++++
T Consensus 144 ~----~~~i~~WSSGTGgAGliGa~SYa~lT~~-~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 P----SIVIAGWSSGTGGAGLIGASSYAFLTSW-ANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred C----CceeccccCCCCcchhhhhhHHHHHhhh-cCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 2 2233444454444445554333333331 114567777776666666455555555544
No 288
>KOG0637|consensus
Probab=69.11 E-value=7.8 Score=37.49 Aligned_cols=63 Identities=11% Similarity=0.146 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCccccchhhchhHHHHHHHHHHHHHHHHHHhh
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVLHFNIKENGTLSALPYLAMWIFSMFASFIADSMI 283 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 283 (455)
.+..+....+...++...=..+.|+|+++ .|.+..-.+.+....-+.+.+.|++.|..+||..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~ 95 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCT 95 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccc
Confidence 34444444444455555556899999998 7999988888888878888899999999999743
No 289
>KOG1479|consensus
Probab=67.64 E-value=29 Score=33.24 Aligned_cols=111 Identities=16% Similarity=0.064 Sum_probs=76.3
Q ss_pred ccchhhHHHHH-HHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHhhcccC
Q psy3467 35 TTAEQGYVLSS-FFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAA-------GHSILALSIIRFIQGLGEGP 102 (455)
Q Consensus 35 s~~~~~~~~s~-~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~-------~~~~~~~~~~r~l~G~~~~~ 102 (455)
++.-.-.+..+ +++.-.+|.+.+.++-++=. +..+.-.++.-....|. +.+...++..-.+.|+..|-
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 34444555566 78888888666665544433 23333333333333232 22333888999999999998
Q ss_pred chhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 103 IVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 103 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
.......+..+-.+++|+-.+-.+.......|...|..++...
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8899999999999999999998898888888888888876543
No 290
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=66.71 E-value=20 Score=31.11 Aligned_cols=87 Identities=21% Similarity=0.320 Sum_probs=54.7
Q ss_pred HHHHhHHh-----------HHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHhhcccCchhhHHHHHhcccCCCcchh
Q psy3467 58 GILAKKYG-----------IGMLINSVFAFLVPVAA----GHSILALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSR 122 (455)
Q Consensus 58 g~l~dr~G-----------~~l~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~ 122 (455)
+.++|||| ++++++...++...+.+ ..+.+.-.+.-.-.|.|.+..+.++..-+.+.+| +....
T Consensus 128 aiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~ 206 (241)
T PF11299_consen 128 AIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMADQ 206 (241)
T ss_pred eeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHH
Confidence 44678998 44444444444433222 1111244566677899999999999999999996 66666
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 123 LGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 123 ~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
..++-.....+....|-...-++
T Consensus 207 i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 207 ILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666665554443
No 291
>KOG3880|consensus
Probab=64.18 E-value=36 Score=31.35 Aligned_cols=133 Identities=16% Similarity=0.125 Sum_probs=81.0
Q ss_pred HHHHHHHHhhhhhcc-cCccccccc-chhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHHHHHHHHHHHHhhhh
Q psy3467 13 VSRVINTKLTRRVHH-KDGSFIWTT-AEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINSVFAFLVPVAAGHSI 86 (455)
Q Consensus 13 ~~~~~~~~l~~~~~~-~~~~~~~s~-~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~~~~~~~~~~~~~~~ 86 (455)
...++|..+.+.+-- -.+.+..+. .|.-|....|.+|..+..--.-..--++= +.-+...++.+.-.+..+.++
T Consensus 262 ~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftps 341 (409)
T KOG3880|consen 262 AEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPS 341 (409)
T ss_pred HHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 344455555544321 133444433 35677777776654322111100000000 333344444455555556666
Q ss_pred H-HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 87 L-ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 87 ~-~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
. ...+.-+.-|+-.|..+....--+.+-.++++|-.+++..+.+-++|..++..++-.+
T Consensus 342 i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 6 6666778889888889988888888888899999999999999999988887776443
No 292
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=56.05 E-value=1.2e+02 Score=27.11 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=10.5
Q ss_pred hHHHHHHhhHHHHHHHHHHHHH
Q psy3467 122 RLGAFVYAGAQFGTVFSLPLSG 143 (455)
Q Consensus 122 ~~~~~~~~~~~~G~~~g~~i~~ 143 (455)
+.....-.+..+|.++|...+.
T Consensus 10 ~~~~~illg~~iGg~~G~~~~~ 31 (248)
T PF11368_consen 10 RFLLLILLGGLIGGFIGFFIGR 31 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444445555555554443
No 293
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=54.40 E-value=50 Score=29.39 Aligned_cols=49 Identities=22% Similarity=0.226 Sum_probs=36.0
Q ss_pred HHHhhhhHHHHHHhcCcc--ccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 237 TLMTELPTFMKQVLHFNI--KENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 237 ~~~~~~~~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
......+.+..+ .+.+. .+.+.......+...++.++.|.+.||.|||+
T Consensus 20 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 70 (338)
T COG0477 20 LLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK 70 (338)
T ss_pred hHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchH
Confidence 334455555555 44444 46788888889999999999999999998773
No 294
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=49.57 E-value=2.1e+02 Score=27.75 Aligned_cols=95 Identities=9% Similarity=-0.077 Sum_probs=61.9
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhHHHHhHHh----HHHHHHH-HHHHHHHHHHhhhhH-HHHHHHHHHhhcccCchhhHH
Q psy3467 35 TTAEQGYVLSSFFYGYVLTQIPFGILAKKYG----IGMLINS-VFAFLVPVAAGHSIL-ALSIIRFIQGLGEGPIVPCTH 108 (455)
Q Consensus 35 s~~~~~~~~s~~~l~~~~~~~~~g~l~dr~G----~~l~~~~-~~~~~~~~~~~~~~~-~~~~~r~l~G~~~~~~~~~~~ 108 (455)
+..--|.+-++..+..+++++..|.+..++. ..+...+ +...+..+....++. ...++.++.+.......+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445688899999999999999999966655 3333333 333334445555565 666666666666666667777
Q ss_pred HHHhcccCCCcchhHHHHHHh
Q psy3467 109 ALLAKWIPPTERSRLGAFVYA 129 (455)
Q Consensus 109 ~~i~e~~~~~~r~~~~~~~~~ 129 (455)
.-++....+|+-+...|+...
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHhccccceeeeeeeHHH
Confidence 777777776776666666544
No 295
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=47.90 E-value=2.8e+02 Score=27.20 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=23.6
Q ss_pred CCCcchhHHHHHHhhHHHHHHHHHHHHHH
Q psy3467 116 PPTERSRLGAFVYAGAQFGTVFSLPLSGL 144 (455)
Q Consensus 116 ~~~~r~~~~~~~~~~~~~G~~~g~~i~~~ 144 (455)
.+++.++..++..++.+.|...-|+..+.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~ 46 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF 46 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc
Confidence 45678888999999999898888888764
No 296
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=47.16 E-value=1.8e+02 Score=24.76 Aligned_cols=36 Identities=11% Similarity=-0.098 Sum_probs=28.6
Q ss_pred cCccccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 251 HFNIKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 251 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
.-|+.+....+..++++..+..+..+.+.++.++|.
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 456777788888899999888888888888877653
No 297
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=45.39 E-value=2.8e+02 Score=26.44 Aligned_cols=22 Identities=18% Similarity=0.055 Sum_probs=13.0
Q ss_pred HHHhhHHHHHHHHHHHHHHhHh
Q psy3467 126 FVYAGAQFGTVFSLPLSGLLSE 147 (455)
Q Consensus 126 ~~~~~~~~G~~~g~~i~~~l~~ 147 (455)
......+.|.+--|++.....+
T Consensus 99 ~~~~~~N~~~lglpi~~~l~g~ 120 (385)
T PF03547_consen 99 LAASFGNTGFLGLPILQALFGE 120 (385)
T ss_pred ecccCCcchhhHHHHHHHHhcc
Confidence 3345567777666666665543
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=44.24 E-value=7.5 Score=36.04 Aligned_cols=25 Identities=16% Similarity=0.316 Sum_probs=0.0
Q ss_pred HHHhhcccCchhhHHHHHhcccCCCc
Q psy3467 94 FIQGLGEGPIVPCTHALLAKWIPPTE 119 (455)
Q Consensus 94 ~l~G~~~~~~~~~~~~~i~e~~~~~~ 119 (455)
++.|.+.+..+.....+.+. +|++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp --------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH
Confidence 45566777777777776665 66554
No 299
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=39.18 E-value=12 Score=34.66 Aligned_cols=105 Identities=20% Similarity=0.146 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhH--Hh----HHHHHHHHHHHHHHHHH-----------hhhhHHHHHHHHHHhhcccCc
Q psy3467 41 YVLSSFFYGYVLTQIPFGILAKK--YG----IGMLINSVFAFLVPVAA-----------GHSILALSIIRFIQGLGEGPI 103 (455)
Q Consensus 41 ~~~s~~~l~~~~~~~~~g~l~dr--~G----~~l~~~~~~~~~~~~~~-----------~~~~~~~~~~r~l~G~~~~~~ 103 (455)
....+|+++-.+|....++..-+ -. ...+.=.++.-....|. +.+++..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567888888888877654211 01 11111111111112221 123337777889999999999
Q ss_pred hhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHh
Q psy3467 104 VPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLL 145 (455)
Q Consensus 104 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l 145 (455)
...+..+..+..++++|..+..+...+...|..+|..++-.+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp -HHHH-------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888876443
No 300
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=32.06 E-value=76 Score=23.84 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=28.2
Q ss_pred cccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 254 IKENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
+...|-.+..++-.+++.++..++..|+..+.+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~ 85 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDR 85 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCCh
Confidence 356788889999999999999999999887653
No 301
>PRK02237 hypothetical protein; Provisional
Probab=29.51 E-value=1.2e+02 Score=22.96 Aligned_cols=32 Identities=13% Similarity=-0.027 Sum_probs=27.4
Q ss_pred ccchhhchhHHHHHHHHHHHHHHHHHHhhhcc
Q psy3467 255 KENGTLSALPYLAMWIFSMFASFIADSMITSE 286 (455)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 286 (455)
...|-.+..++-.+++.++..++..|+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~ 87 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDR 87 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCCh
Confidence 34788889999999999999999999887653
No 302
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=27.76 E-value=2.1e+02 Score=24.34 Aligned_cols=10 Identities=20% Similarity=0.384 Sum_probs=6.5
Q ss_pred HHhhhhHHHH
Q psy3467 238 LMTELPTFMK 247 (455)
Q Consensus 238 ~~~~~~~~~~ 247 (455)
+..|.|.+.+
T Consensus 113 igIYiP~Fa~ 122 (191)
T PF03596_consen 113 IGIYIPLFAS 122 (191)
T ss_pred EEEeehhhhc
Confidence 5667776654
No 303
>KOG3574|consensus
Probab=25.91 E-value=67 Score=30.72 Aligned_cols=67 Identities=9% Similarity=-0.050 Sum_probs=50.0
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchh
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSI 157 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~ 157 (455)
..+....+.+...-..+....+..+++.||.--|+.|.+.++-.++|...-..+...+.+. .+|+.+
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~---ltv~~C 437 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG---LTVKQC 437 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc---Cceeec
Confidence 3344455555555556778888999999999999999999999999877777777777665 555554
No 304
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.77 E-value=45 Score=26.24 Aligned_cols=18 Identities=6% Similarity=0.155 Sum_probs=9.6
Q ss_pred chhHHHhhHHHHHHHHHh
Q psy3467 155 PSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 155 r~~f~~~~~~~~~~~i~~ 172 (455)
||++++..++.++++++.
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 677766555554433333
No 305
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=25.59 E-value=1.2e+02 Score=21.20 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=18.9
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHH
Q psy3467 124 GAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLV 164 (455)
Q Consensus 124 ~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~ 164 (455)
--+.+....++.+++-++|.... +.+..+++.++-
T Consensus 10 e~l~~~il~~~~iisfi~Gy~~q------~~~~~~~~~~~g 44 (76)
T PF06645_consen 10 EKLMQYILIISAIISFIVGYITQ------SFSYTFYIYGAG 44 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 34555556666666666665552 335555554443
No 306
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=25.40 E-value=7e+02 Score=24.99 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=29.3
Q ss_pred cCccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 251 HFNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 251 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
-.+..|+.-.+..++++.-++.+++|.+...+.+
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888999999999999999998888777
No 307
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=24.63 E-value=1.9e+02 Score=18.14 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 133 FGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 133 ~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
+|..+|..+.+.+... .++.+.-++.+++..+..+..
T Consensus 6 iGa~vGg~l~~~lg~~---~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGIN---GGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHHhccc---CCchHHHHHHHHHHHHHHHHH
Confidence 4455555554444332 445555556666655544433
No 308
>KOG1237|consensus
Probab=23.97 E-value=2.4e+02 Score=28.89 Aligned_cols=61 Identities=16% Similarity=0.019 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 88 ALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 88 ~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
+++--.++.|++.........-+.-+-+|++-|+.+.+++.....+|..+..++.......
T Consensus 460 W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 460 WQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777789999999988888888899999999999999999999999999999998777654
No 309
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.96 E-value=2.9e+02 Score=20.08 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh
Q psy3467 220 PFWAILIAHMGQNYGYETLMTELPTFMKQVL 250 (455)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (455)
..+.+.......++++..+..+.|..+....
T Consensus 17 ~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v 47 (91)
T PF04341_consen 17 LAWPLSAIFLVLYFGFVLLSAFAPELMATPV 47 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHcCcc
Confidence 3556666677777888888888888876643
No 310
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=23.79 E-value=2.3e+02 Score=24.88 Aligned_cols=57 Identities=23% Similarity=0.216 Sum_probs=41.0
Q ss_pred HHHHHHhhcccCchhhHHHHHhcccC---CCcchhHHHHHHhhHHHHHHHHHHHHHHhHhc
Q psy3467 91 IIRFIQGLGEGPIVPCTHALLAKWIP---PTERSRLGAFVYAGAQFGTVFSLPLSGLLSEY 148 (455)
Q Consensus 91 ~~r~l~G~~~~~~~~~~~~~i~e~~~---~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~ 148 (455)
.-|=-.|.+.+...=...+++.|-+. ||-|| .++.+-++..+|.+.-.++++.+...
T Consensus 110 lkREaIGat~SI~REp~laiI~ekYGldSpEgrG-Vl~~Yi~GTvfGtiffsllas~~a~~ 169 (241)
T PF11299_consen 110 LKREAIGATFSIGREPNLAIISEKYGLDSPEGRG-VLGVYIIGTVFGTIFFSLLASLLASL 169 (241)
T ss_pred ccHHhhcceeecccCcceeeeehhcCCCCccccc-eEEEeeehhhHHHHHHHHHHHHHHhc
Confidence 34666676777666667788899884 56677 45777777888888888888877653
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.65 E-value=3.2e+02 Score=20.68 Aligned_cols=26 Identities=31% Similarity=0.420 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhHHh
Q psy3467 40 GYVLSSFFYGYVLTQIPFGILAKKYG 65 (455)
Q Consensus 40 ~~~~s~~~l~~~~~~~~~g~l~dr~G 65 (455)
..-.+.=+++..+.....|++.|||=
T Consensus 45 a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44456667777777788899999976
No 312
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=22.95 E-value=6.7e+02 Score=23.95 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=20.7
Q ss_pred cccCCCcchhHHHHHH-hhHHHHHHHHHHHHHHhHhcccCCCCc
Q psy3467 113 KWIPPTERSRLGAFVY-AGAQFGTVFSLPLSGLLSEYGFAGGWP 155 (455)
Q Consensus 113 e~~~~~~r~~~~~~~~-~~~~~G~~~g~~i~~~l~~~~~~~~wr 155 (455)
|+.| .+|-...+... .....|.++||.++.. +||-
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~aa~-------~Gwl 83 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILAAQ-------FGWL 83 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHHHH-------hcch
Confidence 4444 44555555543 3455677777777732 6887
No 313
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=22.36 E-value=4.5e+02 Score=21.76 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=34.7
Q ss_pred ccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhccc---CCCCchhHHHhhHHHHHHHHHh
Q psy3467 114 WIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGF---AGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 114 ~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~---~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
.+|.++|.+..+.+.++.-.+...--.+-+.+..... +..++..+++.++++.+.+++.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mv 75 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMV 75 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHh
Confidence 3455566666666666555555444455554444310 1268888999999888855543
No 314
>PRK11715 inner membrane protein; Provisional
Probab=22.19 E-value=7.6e+02 Score=24.27 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=39.7
Q ss_pred HHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 93 RFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 93 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
..+.|++...++....+ ++ |+-+...+..-++...-..++-.++..+ .+||....+.+.+..+..++.
T Consensus 334 YlLVGlAl~lFYLLLLS-lS-----EHigF~~AYliAa~a~v~li~~Y~~~vl------~~~k~g~~~~~~L~~LYg~Ly 401 (436)
T PRK11715 334 YLLVGLALVLFYLLLLS-LS-----EHIGFTLAYLIAALACVLLIGFYLSAVL------RSWKRGLLFAAALAALYGVLY 401 (436)
T ss_pred HHHHHHHHHHHHHHHHH-HH-----hhhchHHHHHHHHHHHHHHHHHHHHHHH------hcchHHHHHHHHHHHHHHHHH
Confidence 34566665555444333 22 4455555555554444444444444444 678888887777777756555
Q ss_pred hhh
Q psy3467 173 LLY 175 (455)
Q Consensus 173 ~~~ 175 (455)
...
T Consensus 402 ~lL 404 (436)
T PRK11715 402 GLL 404 (436)
T ss_pred HHH
Confidence 443
No 315
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=22.11 E-value=6.1e+02 Score=23.15 Aligned_cols=58 Identities=16% Similarity=0.055 Sum_probs=34.7
Q ss_pred HHHHHHHHhhcccCchhhHHHHHhcccCCCcchhHHHHHHhhHHHHHHHHHHHHHHhHh
Q psy3467 89 LSIIRFIQGLGEGPIVPCTHALLAKWIPPTERSRLGAFVYAGAQFGTVFSLPLSGLLSE 147 (455)
Q Consensus 89 ~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~~~g~~i~~~l~~ 147 (455)
.-..|.+.|+-. ..+..++++++-.+|++++--..--...+..++.++.|++|-.+.-
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466787777655 3456688899999986544333333333444455566666655543
No 316
>KOG1278|consensus
Probab=21.34 E-value=1.9e+02 Score=29.04 Aligned_cols=33 Identities=12% Similarity=0.282 Sum_probs=25.9
Q ss_pred CccccchhhchhHHHHHHHHHHHHHHHHHHhhh
Q psy3467 252 FNIKENGTLSALPYLAMWIFSMFASFIADSMIT 284 (455)
Q Consensus 252 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 284 (455)
.+++.-|-++....+-..++.+++|+.+.|+-+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYK 388 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhHh
Confidence 477777877777788888888888888887654
No 317
>PRK15015 carbon starvation protein A; Provisional
Probab=20.57 E-value=9.8e+02 Score=24.96 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=43.3
Q ss_pred HHHHHHHhhhhhHHHHhHHh-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCchhhHH-HHHhcccCCCcchhH
Q psy3467 46 FFYGYVLTQIPFGILAKKYG-IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIVPCTH-ALLAKWIPPTERSRL 123 (455)
Q Consensus 46 ~~l~~~~~~~~~g~l~dr~G-~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~-~~i~e~~~~~~r~~~ 123 (455)
......+|..-++.++-+-| ..-..+.+....+........|.-.+.|=+.+.--.-..|+-. .=-.|+.|.+++ ..
T Consensus 10 w~~~a~~ga~~~~~~al~rge~mnal~lv~aa~~~y~iaYrfYgr~ia~kv~~lD~~r~TPA~~~~DG~DYvPt~k~-VL 88 (701)
T PRK15015 10 WTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKK-VL 88 (701)
T ss_pred HHHHHHHHHHHheeeeecCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCceECCCCCCcCcCCcc-ch
Confidence 34455677777888887777 1111111111111111111233222333333443332222211 112355665554 44
Q ss_pred HHHH-HhhHHHHHHHHHHHHH
Q psy3467 124 GAFV-YAGAQFGTVFSLPLSG 143 (455)
Q Consensus 124 ~~~~-~~~~~~G~~~g~~i~~ 143 (455)
.|-. ......|.++||.++.
T Consensus 89 fGHHFasIAGAGPivGPvlAa 109 (701)
T PRK15015 89 FGHHFAAIAGAGPLVGPVLAA 109 (701)
T ss_pred hHHHHHHHhccCccHHHHHHH
Confidence 4443 4455667777887775
No 318
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=20.41 E-value=6.4e+02 Score=23.31 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=46.6
Q ss_pred HHHhhhhhHHHHhHHh--------HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhcccCchhhHHHHHhcccCCCcch
Q psy3467 50 YVLTQIPFGILAKKYG--------IGMLINSVFAFLVPVAAGHSILALSIIRFIQGLGEGPIVPCTHALLAKWIPPTERS 121 (455)
Q Consensus 50 ~~~~~~~~g~l~dr~G--------~~l~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~ 121 (455)
-.+..-+++.++||-| ..+++....... ... ..+. ..-.+.|...|......+.++......++--
T Consensus 20 PLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~--~~~-t~sp---w~gl~~a~l~g~l~~ll~a~~ti~l~~nqii 93 (304)
T COG1079 20 PLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALF--AYG-TGSP---WLGLLAAALVGALFGLLHAFLTIKLRANQII 93 (304)
T ss_pred HHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHH--HHc-cccH---HHHHHHHHHHHHHHHHHHHHHHHhhccccch
Confidence 3455667788999999 222222222111 111 1111 1122233334455566777777777666666
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHH
Q psy3467 122 RLGAFVYAGAQFGTVFSLPLSGL 144 (455)
Q Consensus 122 ~~~~~~~~~~~~G~~~g~~i~~~ 144 (455)
...++.-.+..+...++..+.+.
T Consensus 94 sG~alnl~a~Glt~fl~~~~~~~ 116 (304)
T COG1079 94 SGLALNLLASGLTAFLGQSIFGQ 116 (304)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Confidence 66666666666666666555443
No 319
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.39 E-value=3.8e+02 Score=20.06 Aligned_cols=12 Identities=0% Similarity=0.138 Sum_probs=5.0
Q ss_pred hhhhHHHHHHhc
Q psy3467 240 TELPTFMKQVLH 251 (455)
Q Consensus 240 ~~~~~~~~~~~g 251 (455)
.++-.++.+.++
T Consensus 60 ~~lG~WLD~~~~ 71 (100)
T TIGR02230 60 VAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHhhcC
Confidence 334444444433
No 320
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=20.05 E-value=2.7e+02 Score=18.25 Aligned_cols=39 Identities=13% Similarity=0.060 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhHhcccCCCCchhHHHhhHHHHHHHHHh
Q psy3467 131 AQFGTVFSLPLSGLLSEYGFAGGWPSIFYVFGLVGAVWSVAF 172 (455)
Q Consensus 131 ~~~G~~~g~~i~~~l~~~~~~~~wr~~f~~~~~~~~~~~i~~ 172 (455)
.-+|.+++.+.+..-... .+.+....+..+.+++..++.
T Consensus 11 ~il~~vvgyI~ssL~~~~---~n~~~~~Ii~vi~~i~~~~~~ 49 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVT---YNFTTAAIIAVIFGIIVANII 49 (57)
T ss_pred HHHHHHHHHHHHHHhCCC---CChHHHHHHHHHHHHHHHHHH
Confidence 455666666666555444 666666666555555544433
Done!