Query psy3471
Match_columns 227
No_of_seqs 225 out of 293
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 17:33:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 99.9 2E-23 6.8E-28 183.6 1.0 131 9-150 104-248 (276)
2 1g9r_A Glycosyl transferase; a 99.8 1.2E-21 4.2E-26 173.5 -1.4 129 9-150 99-248 (311)
3 3u2u_A Glycogenin-1, GN-1, GN1 99.0 7.2E-11 2.5E-15 104.3 1.4 113 4-149 93-216 (263)
4 1ll2_A Glycogenin-1; protein-s 98.9 1.1E-10 3.8E-15 105.5 -0.1 108 9-149 98-215 (333)
5 3tzt_A Glycosyl transferase fa 96.9 0.0012 4E-08 57.6 6.0 53 174-227 58-111 (276)
6 1g9r_A Glycosyl transferase; a 92.7 0.052 1.8E-06 47.5 2.5 51 175-227 54-106 (311)
7 1ll2_A Glycogenin-1; protein-s 28.0 31 0.0011 30.6 2.6 21 203-226 84-104 (333)
8 2lfw_B NEPR anti sigma factor; 24.7 46 0.0016 23.6 2.4 17 84-100 27-43 (62)
9 1xhj_A Nitrogen fixation prote 21.0 1E+02 0.0035 22.7 3.9 35 151-186 2-36 (88)
10 4ayl_A BOGT-metal-independent 13.5 1.5E+02 0.0051 26.0 3.7 76 64-145 150-227 (246)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.86 E-value=2e-23 Score=183.60 Aligned_cols=131 Identities=17% Similarity=0.156 Sum_probs=89.5
Q ss_pred CCCcCcchhhHhhHHHHhhCCCCCCceecccCCCCcccccCCcccchhhhhhhcC-CCCCcccceeeeeHHHHHHHhhhh
Q psy3471 9 LGNAPYGYVVRADMKELVDYDLGNAPYGYVPFCDSRTEMDGFRFWNQGYWRNHLQ-GRKYHISALYVVDLKRFRKIAAGD 87 (227)
Q Consensus 9 ~~yvDaDqVVr~Dl~eL~~~DL~g~p~g~vp~c~~~~e~~G~~fW~~GYW~~~L~-~~~Y~~Sgl~vvDL~kfR~~~~Gd 87 (227)
+.|+|||+||++||.|||++||+|+++|+||+|... .|.+++++..++ ..+||||||+||||++||+.+.++
T Consensus 104 vlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~-------~~~~~~~~~~l~~~~~yfNsGV~linl~~~R~~~~~~ 176 (276)
T 3tzt_A 104 ILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKT-------DMANNVNRIRLGTDTDYYNSGLLLINLKRAREEIDPD 176 (276)
T ss_dssp EEEECSSEEECSCSHHHHTCCCTTSSEEEEEC---------------------------CEEEEEEEEEHHHHHHHCCHH
T ss_pred EEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccc-------hHHHHHHHhcCCCCCCeEEeeEEEEEHHHHHhhhHHH
Confidence 579999999999999999999999999999998753 255667766676 348999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCccccCCcccCccccccccccCc-hhhhhhccCC------------cccccccceeccccC
Q psy3471 88 RLRGQYQALSQDPNSLSNLDQDLPNNMIHQVPIKSLPQ-EWLWCETWCD------------DRSKSSAKTIDLCNN 150 (227)
Q Consensus 88 ~LR~~Yq~ls~dp~sL~nlDQDLlN~~q~~vpI~sLp~-ewlwcetwc~------------~~~~~~Ak~idlc~n 150 (227)
+++...+. .++++.+.|||++|.++++ +|+.||. +||+.-.... ++..+.|++|=+|+.
T Consensus 177 ~~~~~~~~---~~~~~~~~DQd~LN~~f~~-~~~~Lp~~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~ 248 (276)
T 3tzt_A 177 EIFSFVED---NHMNLLLPDQDILNAMYGD-RIYPLDDLIYNYDARNYSSYLIRSKKQADLAWLMDHTVVLHFCGR 248 (276)
T ss_dssp HHHHHHHH---C--------CHHHHHHHGG-GEEEEEHHHHSEETTCHHHHHHHTTTCCSHHHHHHHCCEEECCSS
T ss_pred HHHHHHHh---ccccccCCChhHHHHHHhC-CEEECCchheeeecccchhhhccccchhhhhhhccCCeEEEECCC
Confidence 99976554 6778888999999999976 9999998 9999754321 123456777777764
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.80 E-value=1.2e-21 Score=173.53 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=105.6
Q ss_pred CCCcCcchhhHhhHHHHhhCCCCCCceecccCCCCcccccCCcccchhhhhhhcC---CCCCcccceeeeeHHHHHHHhh
Q psy3471 9 LGNAPYGYVVRADMKELVDYDLGNAPYGYVPFCDSRTEMDGFRFWNQGYWRNHLQ---GRKYHISALYVVDLKRFRKIAA 85 (227)
Q Consensus 9 ~~yvDaDqVVr~Dl~eL~~~DL~g~p~g~vp~c~~~~e~~G~~fW~~GYW~~~L~---~~~Y~~Sgl~vvDL~kfR~~~~ 85 (227)
+.|+|||+||++||.|||++||+|+++|+||.|... ....|++.++ +.+||||||+|+|+++||+.++
T Consensus 99 vlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~---------~~~~~~~~~~~~~~~~yfNsGv~linl~~~r~~~~ 169 (311)
T 1g9r_A 99 VLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVE---------RQEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDI 169 (311)
T ss_dssp EEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHH---------TSTTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCH
T ss_pred EEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchh---------hhHHHHHhcCCCCCCceEeeeeeeeeHHHHHhcch
Confidence 579999999999999999999999999999987532 1235667776 3469999999999999999999
Q ss_pred hhHHHHHHHhhcCCCCCCccccCCcccCccccccccccCchhhhhhcc-------CC-----------cccccccceecc
Q psy3471 86 GDRLRGQYQALSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETW-------CD-----------DRSKSSAKTIDL 147 (227)
Q Consensus 86 Gd~LR~~Yq~ls~dp~sL~nlDQDLlN~~q~~vpI~sLp~ewlwcetw-------c~-----------~~~~~~Ak~idl 147 (227)
++++....+. .++++.+.|||++|.++.. .|..||.+||+..+. .+ .+..+.+++|-+
T Consensus 170 ~~~~~~~~~~---~~~~~~~~DQd~lN~~f~~-~~~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy 245 (311)
T 1g9r_A 170 FKMSSEWVEQ---YKDVMQYQDQDILNGLFKG-GVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHY 245 (311)
T ss_dssp HHHHHHHHHH---HTTTCSSHHHHHHHHHHTT-SEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEEC
T ss_pred HHHHHHHHHh---ccCcCccCCcCHHHHHHcC-CEEEcChhhccCcchhhHHhhhcccccchhhhhHHhhccCCCEEEEe
Confidence 9999987665 4567788899999999866 899999999997543 32 123357899999
Q ss_pred ccC
Q psy3471 148 CNN 150 (227)
Q Consensus 148 c~n 150 (227)
|+.
T Consensus 246 ~g~ 248 (311)
T 1g9r_A 246 CGP 248 (311)
T ss_dssp CSS
T ss_pred CCc
Confidence 974
No 3
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=98.99 E-value=7.2e-11 Score=104.27 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=83.9
Q ss_pred ccccc-CCCcCcchhhHhhHHHHhhCCCCCCceecccCCCCcccccCCcccchhhhhhhcCCCCCcccceeeeeHHHHHH
Q psy3471 4 LVDYD-LGNAPYGYVVRADMKELVDYDLGNAPYGYVPFCDSRTEMDGFRFWNQGYWRNHLQGRKYHISALYVVDLKRFRK 82 (227)
Q Consensus 4 ~~~~~-~~yvDaDqVVr~Dl~eL~~~DL~g~p~g~vp~c~~~~e~~G~~fW~~GYW~~~L~~~~Y~~Sgl~vvDL~kfR~ 82 (227)
|.+|| +.|+|||++|.+||.||+++| .+|+||.. | | ..||||||+|++++
T Consensus 93 l~~~~~vlylD~D~~v~~~~~~Lf~~~----~~aA~~d~-------~--------~------~~~fNsGv~li~p~---- 143 (263)
T 3u2u_A 93 LTQYSKCVFMDADTLVLANIDDLFDRE----ELSAAPDP-------G--------W------PDCFNSGVFVYQPS---- 143 (263)
T ss_dssp CTTCSEEEEECTTEEECSCCGGGGGSC----SSEEEECT-------T--------S------TTSEEEEEEEECCC----
T ss_pred ccCcceEEEEcCCEeeccCHHHHhCCC----cceEeccC-------C--------C------CccccCeEEEEccc----
Confidence 44554 679999999999999999998 57888853 1 2 15999999999975
Q ss_pred HhhhhHHHHHHHhhcCCCCCCccccCCcccCccccc----cccccCchhhhhhc--cCCc----ccccccceecccc
Q psy3471 83 IAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMIHQV----PIKSLPQEWLWCET--WCDD----RSKSSAKTIDLCN 149 (227)
Q Consensus 83 ~~~Gd~LR~~Yq~ls~dp~sL~nlDQDLlN~~q~~v----pI~sLp~ewlwcet--wc~~----~~~~~Ak~idlc~ 149 (227)
....+++....+.. .++..-|||++|.++... .+..||..||.--+ |... +..+.+|+|=+|.
T Consensus 144 ~~~~~~l~~~~~~~----~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~g 216 (263)
T 3u2u_A 144 VETYNQLLHLASEQ----GSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLG 216 (263)
T ss_dssp HHHHHHHHHHHHHH----CCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECCS
T ss_pred HHHHHHHHHHHHhc----CCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhcCCeEEEEECC
Confidence 45666776665432 356677999999999753 78999999998532 2211 1246788898886
No 4
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=98.92 E-value=1.1e-10 Score=105.47 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=77.0
Q ss_pred CCCcCcchhhHhhHHHHhhCCCCCCceecccCCCCcccccCCcccchhhhhhhcCCCCCcccceeeeeHHHHHHHhhhhH
Q psy3471 9 LGNAPYGYVVRADMKELVDYDLGNAPYGYVPFCDSRTEMDGFRFWNQGYWRNHLQGRKYHISALYVVDLKRFRKIAAGDR 88 (227)
Q Consensus 9 ~~yvDaDqVVr~Dl~eL~~~DL~g~p~g~vp~c~~~~e~~G~~fW~~GYW~~~L~~~~Y~~Sgl~vvDL~kfR~~~~Gd~ 88 (227)
+.|+|||+||.+||.|||+++ ++|+||.+ | | ..|||||++|++++. ..-++
T Consensus 98 vlYLDaD~lv~~di~eLf~~~----~~aAv~d~-------~--------~------~~~fNsGvmlin~~~----~~~~~ 148 (333)
T 1ll2_A 98 CVFMDADTLVLANIDDLFERE----ELSAAPDP-------G--------W------PDCFNSGVFVYQPSV----ETYNQ 148 (333)
T ss_dssp EEEECTTEEECSCCGGGGGSC----SSEEEECS-------S--------S------TTSEEEEEEEECCCH----HHHHH
T ss_pred EEEEeCCEEeccCHHHHhCCC----ceeEEecC-------C--------C------CcceeeeEEEEeCCH----HHHHH
Confidence 579999999999999999998 58888853 1 1 149999999996641 22244
Q ss_pred HHHHHHhhcCCCCCCccccCCcccCccccc---c-ccccCchhhhhhcc--CC----cccccccceecccc
Q psy3471 89 LRGQYQALSQDPNSLSNLDQDLPNNMIHQV---P-IKSLPQEWLWCETW--CD----DRSKSSAKTIDLCN 149 (227)
Q Consensus 89 LR~~Yq~ls~dp~sL~nlDQDLlN~~q~~v---p-I~sLp~ewlwcetw--c~----~~~~~~Ak~idlc~ 149 (227)
+...... ..++.+-|||++|.++... . +..||..||+..+- .. ....+.+|+|-++.
T Consensus 149 l~~~~~~----~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~g 215 (333)
T 1ll2_A 149 LLHVASE----QGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFLG 215 (333)
T ss_dssp HHHHHHH----TCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECCS
T ss_pred HHHHHHh----cCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcCCCEEEEECC
Confidence 4444333 2456677999999998752 1 27899999986531 11 12357899999886
No 5
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=96.92 E-value=0.0012 Score=57.63 Aligned_cols=53 Identities=13% Similarity=0.250 Sum_probs=36.5
Q ss_pred HHccceeeEeccccchhhhhhhHHHHH-HHHHHHhhhhhcCCCCCCeEEEecCCC
Q psy3471 174 RAYKFEYELVQYKWPRWLTQQTEKQRI-IWGYKILFLDVLFPLDVKKIIFVDADQ 227 (227)
Q Consensus 174 ~~y~fe~e~v~y~WP~wl~~q~~~~r~-~~~~kiLFLDvlfp~~~~~vi~~d~dq 227 (227)
+.+|++++++.... .++.....++|. .+.|--||+..+||.+++||||+|+|.
T Consensus 58 ~~~~~~i~~~~~~~-~~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~ 111 (276)
T 3tzt_A 58 KKFSYTLYPIRATD-DLFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDM 111 (276)
T ss_dssp HTTTCEEEEEECC--------------CHHHHHHHTHHHHSCTTCCEEEEECSSE
T ss_pred HHcCCEEEEEEeCH-HHHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCe
Confidence 36899999999885 456554444453 689999999999999999999999994
No 6
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=92.65 E-value=0.052 Score=47.52 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=36.5
Q ss_pred HccceeeEeccccchhhhhhhH--HHHHHHHHHHhhhhhcCCCCCCeEEEecCCC
Q psy3471 175 AYKFEYELVQYKWPRWLTQQTE--KQRIIWGYKILFLDVLFPLDVKKIIFVDADQ 227 (227)
Q Consensus 175 ~y~fe~e~v~y~WP~wl~~q~~--~~r~~~~~kiLFLDvlfp~~~~~vi~~d~dq 227 (227)
.+|++++++....+ .+..... +....+.|--||+..+|| +++||||+|+|.
T Consensus 54 ~~~~~i~~~~~~~~-~~~~~~~~~~~~s~~~y~Rl~l~~ll~-~~~kvlyLD~D~ 106 (311)
T 1g9r_A 54 GGGGNIRFIDVNPE-DFAGFPLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDV 106 (311)
T ss_dssp GGTTTEEEEECCGG-GGTTSCCCCTTCCGGGGGGGGHHHHCC-SCSCEEEECSSE
T ss_pred HcCCEEEEEEcCHH-HHhcCccccccCCHHHHHHHHHHHHhh-hcCEEEEEcCCe
Confidence 57899999887743 3332221 112357888889988888 799999999994
No 7
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=27.95 E-value=31 Score=30.55 Aligned_cols=21 Identities=33% Similarity=0.398 Sum_probs=15.4
Q ss_pred HHHHhhhhhcCCCCCCeEEEecCC
Q psy3471 203 GYKILFLDVLFPLDVKKIIFVDAD 226 (227)
Q Consensus 203 ~~kiLFLDvlfp~~~~~vi~~d~d 226 (227)
-+|++..+ | .+++||||+|+|
T Consensus 84 ~~Kl~i~~-l--~~ydrvlYLDaD 104 (333)
T 1ll2_A 84 LTKLHCWS-L--TQYSKCVFMDAD 104 (333)
T ss_dssp HHHGGGGG-C--TTCSEEEEECTT
T ss_pred HHHHHHhH-h--cCCCeEEEEeCC
Confidence 45665555 2 358999999998
No 8
>2lfw_B NEPR anti sigma factor; signal transduction, response regulator, sigma factor mimicr sigma factor, general stress response, signaling protein; NMR {Sphingomonas SP}
Probab=24.72 E-value=46 Score=23.61 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=13.9
Q ss_pred hhhhHHHHHHHhhcCCC
Q psy3471 84 AAGDRLRGQYQALSQDP 100 (227)
Q Consensus 84 ~~Gd~LR~~Yq~ls~dp 100 (227)
.+|.+||..|+.....|
T Consensus 27 ~Ig~~LR~~Yd~vv~E~ 43 (62)
T 2lfw_B 27 DMGAALRSAYQKTIEEQ 43 (62)
T ss_dssp THHHHHHHHHHTTTSSC
T ss_pred HHHHHHHHHHHHHhccC
Confidence 68999999999875444
No 9
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=20.98 E-value=1e+02 Score=22.75 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCcchhHHHHHHHhchhHHHHHHHHccceeeEeccc
Q psy3471 151 PLTKEAKLSAAMRILYSVYAFIFRAYKFEYELVQYK 186 (227)
Q Consensus 151 p~~ke~kl~~a~r~ipew~~yia~~y~fe~e~v~y~ 186 (227)
|+|.+++.++.++++.+-.++++. .|=.+|++.++
T Consensus 2 ~~t~~~~~~~I~~~L~~IRP~L~~-dGGdvelv~v~ 36 (88)
T 1xhj_A 2 PTENPTMFDQVAEVIERLRPFLLR-DGGDCTLVDVE 36 (88)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHH-HSCEEEEEECC
T ss_pred CCChHHHHHHHHHHHHHhcHHHHh-cCCeEEEEEEE
Confidence 788899999999999998888886 67789999886
No 10
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=13.49 E-value=1.5e+02 Score=25.96 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=47.3
Q ss_pred CCCCcccceeeeeHHHHHHHhhhhHHHHHHHhhcCCCCCCccccCCcccCccc--cccccccCchhhhhhccCCcccccc
Q psy3471 64 GRKYHISALYVVDLKRFRKIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMIH--QVPIKSLPQEWLWCETWCDDRSKSS 141 (227)
Q Consensus 64 ~~~Y~~Sgl~vvDL~kfR~~~~Gd~LR~~Yq~ls~dp~sL~nlDQDLlN~~q~--~vpI~sLp~ewlwcetwc~~~~~~~ 141 (227)
|.=|+-+|++===...+.++.. .-.....+.+.++-.+++. |.-=||..+. . |-..||+|++|.+.|-. ...
T Consensus 150 GdfYY~ga~fGG~~~~vl~Lt~-~c~~~i~~D~~n~I~A~wh-DESHLNKYfl~~K-P~~vLSPEY~wd~~~~~---p~~ 223 (246)
T 4ayl_A 150 GRYYYAGGLSGGCTKAYLKLCT-TICSWVDRDATNHIIPIWH-DESLINKYFLDNP-PAITLSPAYLYPEGWLL---PFE 223 (246)
T ss_dssp -CCCBCSSEEEEEHHHHHHHHH-HHHHHHHHHHTTCSSCSCC-HHHHHHHHHHHSC-CSEEECGGGGEETTCCC---SSC
T ss_pred CCeEEeeeecCCcHHHHHHHHH-HHHHHHHHHHhCCceEecc-chhHhHHHHHhCC-CCeeeCHHHcCCcccCC---CCc
Confidence 4458888887433444443321 1111223455566777766 8888888764 4 65569999999998733 356
Q ss_pred ccee
Q psy3471 142 AKTI 145 (227)
Q Consensus 142 Ak~i 145 (227)
+|+|
T Consensus 224 ~kii 227 (246)
T 4ayl_A 224 PIIL 227 (246)
T ss_dssp CSEE
T ss_pred cEEE
Confidence 7887
Done!