Your job contains 1 sequence.
>psy3476
MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA
GDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK
HRREKTKIVFITEGLLLRQDSGLITDIPGPDASLSSRERALRHGEIKLLQAIKRKKAEEA
PKRRKMLKADNAYEIEEEEEEEEGERLESMDANEVEFRLKHDPKQVQVATDNFLSSYDIL
ILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHERHLHGDFLLGV
IKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSAT
INIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKY
PRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL
RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG
RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN
IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS
VQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEE
QRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRHGEIKLLQAIKRKKAEEAP
KRRKMLKADNAYEIEEEEEEEEGERLESRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSI
DSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV
DIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVF
GSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTM
LLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFV
HHSEEEEEEEAGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHLHG
DFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVI
LASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPP
PGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLV
FDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRT
GAESGVPGSNPFVAEFPMVVEETLGGVRVTPYLVYDW
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3476
(1417 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 1354 2.0e-238 6
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 1346 1.5e-236 6
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 1348 3.1e-236 6
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 1354 1.3e-235 6
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 1383 5.7e-235 6
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 1308 4.5e-233 6
FB|FBgn0052533 - symbol:CG32533 species:7227 "Drosophila ... 1384 9.7e-233 5
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 1341 1.1e-227 5
WB|WBGene00021365 - symbol:smgl-2 species:6239 "Caenorhab... 1136 7.8e-152 5
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 680 8.2e-129 3
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 669 1.3e-93 4
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 657 5.0e-93 4
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 651 4.3e-92 3
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 645 9.3e-90 3
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 648 1.2e-89 3
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 604 3.2e-89 4
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 640 4.1e-89 3
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 593 1.3e-87 4
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 624 1.4e-87 3
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 620 2.3e-87 3
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 645 2.4e-87 3
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 635 3.3e-87 3
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 605 5.0e-87 4
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 610 2.0e-86 4
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 637 4.7e-86 3
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 607 5.4e-86 4
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 607 5.4e-86 4
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 607 5.4e-86 4
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 607 5.4e-86 4
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 607 5.4e-86 4
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 607 5.4e-86 4
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 608 1.1e-85 4
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 613 1.2e-85 3
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 588 1.7e-85 4
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 639 1.8e-85 3
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 610 2.8e-85 4
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 613 4.5e-85 4
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 629 5.6e-85 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 629 5.6e-85 3
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 589 5.7e-85 4
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 606 1.3e-84 4
UNIPROTKB|Q608K8 - symbol:MCA1482 "ATP-dependent helicase... 693 1.6e-84 4
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 600 1.7e-84 4
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 600 1.7e-84 4
POMBASE|SPAC20H4.09 - symbol:SPAC20H4.09 "ATP-dependent R... 583 2.1e-84 3
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 570 2.3e-84 4
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 650 3.4e-84 3
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 564 4.3e-84 5
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 597 4.6e-84 4
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 625 7.0e-84 4
UNIPROTKB|P43329 - symbol:hrpA species:83333 "Escherichia... 677 7.1e-84 4
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 661 1.6e-83 3
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 661 1.6e-83 3
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 646 2.0e-83 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 646 2.6e-83 3
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 558 2.8e-83 4
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 646 2.8e-83 3
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 646 3.4e-83 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 646 3.4e-83 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 646 3.5e-83 3
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 646 3.5e-83 3
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 646 3.6e-83 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 646 3.9e-83 3
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 629 4.1e-83 3
UNIPROTKB|Q9KS77 - symbol:VC1382 "ATP-dependent helicase ... 676 4.3e-83 4
TIGR_CMR|VC_1382 - symbol:VC_1382 "ATP-dependent helicase... 676 4.3e-83 4
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 588 4.7e-83 3
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 637 8.1e-83 3
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 557 8.3e-83 5
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 596 9.2e-83 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 643 1.2e-82 3
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 623 1.2e-82 3
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 631 1.9e-82 3
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 611 1.9e-82 3
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 547 5.5e-82 4
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 556 7.7e-82 4
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 666 8.2e-82 4
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 666 8.2e-82 4
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 556 1.3e-81 4
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 557 2.1e-81 4
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 612 2.1e-81 4
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 637 2.1e-81 4
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 568 3.3e-81 3
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 636 3.6e-81 3
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 636 3.6e-81 3
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 583 6.1e-81 3
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 633 6.9e-81 4
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 633 8.5e-81 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 648 9.7e-81 4
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 558 1.0e-80 4
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 557 1.2e-80 4
UNIPROTKB|O83538 - symbol:TP_0526 "ATP-dependent helicase... 584 1.3e-80 3
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 527 1.3e-80 5
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 538 1.9e-80 3
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 604 2.4e-80 4
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 606 2.4e-80 4
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 603 3.1e-80 4
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 603 3.1e-80 4
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 602 3.8e-80 4
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 603 4.8e-80 4
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 1354 (481.7 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 253/442 (57%), Positives = 330/442 (74%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 267 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSY 326
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPI-VELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
F A +++VPGRL+PI + Y P E +KSEKLDPGP++R+L ID KYP ERGD+
Sbjct: 327 FGT-APVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDL 385
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
L+F+SG++EISS++ AAQ Y ++Q W+VLPLHS LS+ +QD+VF AP G+RKCI+STN
Sbjct: 386 LVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTN 445
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
IAETS+TIDGIRFVVDSGKVKEM YD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC+
Sbjct: 446 IAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCF 505
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP ++E+++ L
Sbjct: 506 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 565
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + VL++AA LSVQSPFT
Sbjct: 566 QDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRS 625
Query: 669 AFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR-SKKWCKRRGIEEQRFYEVT 727
A +P+C AR+ LES+ GDP T+ N + W+ VK +R R S+KWC+ RGIEE R YE+
Sbjct: 626 AQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMA 685
Query: 728 KLRSQFKQVLGDSGLITDIPGP 749
LR QFK++L D GL+ P
Sbjct: 686 NLRRQFKELLEDHGLLARAQAP 707
Score = 428 (155.7 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 81/137 (59%), Positives = 104/137 (75%)
Query: 3 PALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
P E++ L YLDF QK+ F L K++ + +LP+AQY I+ T+ + +VV++AGD
Sbjct: 131 PERVTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGD 190
Query: 63 TGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR 122
TGCGKSTQ+PQYL+ AGF +ACTQPRRIACISL+KRV++E+LSQY + VGYQIRFE R
Sbjct: 191 TGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTR 250
Query: 123 REKTKIVFITEGLLLRQ 139
TKIVF+T GLLLRQ
Sbjct: 251 TAATKIVFLTVGLLLRQ 267
Score = 328 (120.5 bits), Expect = 1.6e-106, Sum P(6) = 1.6e-106
Identities = 59/120 (49%), Positives = 84/120 (70%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP +
Sbjct: 498 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPAS 557
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 558 LETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 617
Score = 326 (119.8 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 76/176 (43%), Positives = 111/176 (63%)
Query: 1177 RIAKDLLSGSTARSHKDVT-----ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDK 1231
R + D L +T+ S +D+T +LK++L GLYPQ+A+ D FN+S + +FH + K
Sbjct: 774 RHSLDQLQAATS-SAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSK 832
Query: 1232 GFVSLHPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
LHP +F + P+VL E + G + ++ +SSKHQLL ++SLLET+KP+L
Sbjct: 833 QGTVLHPTCIFANSPEVLHAQEQE-ARGSEGSQ-DDKDKMSSKHQLLTFVSLLETNKPYL 890
Query: 1292 VNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSL 1347
VNC+R+PALQ+LLLFS ++ TN D +RLV D W+E LQ A S + V L S+
Sbjct: 891 VNCVRIPALQSLLLFSRSLDTNGDCSRLVADGWLE----LQLADSESAVRLLAASV 942
Score = 187 (70.9 bits), Expect = 6.6e-84, Sum P(4) = 6.6e-84
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 267 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSY 326
Query: 1175 F 1175
F
Sbjct: 327 F 327
Score = 129 (50.5 bits), Expect = 7.1e-86, Sum P(6) = 7.1e-86
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 569 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 617
Score = 129 (50.5 bits), Expect = 7.1e-86, Sum P(6) = 7.1e-86
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 569 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 617
Score = 129 (50.5 bits), Expect = 7.1e-86, Sum P(6) = 7.1e-86
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 569 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 617
Score = 113 (44.8 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 274 LPQYQVLIVDEVHERHLHNDFLLGVLRRLL 303
Score = 105 (42.0 bits), Expect = 1.4e-237, Sum P(6) = 1.4e-237
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 267 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVL 299
Score = 97 (39.2 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 1329 VPLQEAKSTADVNQLEHSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPG 1388
V +E ++ D ++ H L+RDL+QF++S + YS+RRL +++ +Y + P
Sbjct: 967 VDQEEEEAPVDPKEVAH-LSRDLLQFVASK--VPYSLRRLTGLEVQNLYVGPQTITAAPS 1023
Query: 1389 SNPFVAEFPMVVEETLGGVRVTPYLVYD 1416
+ T GG VT +L Y+
Sbjct: 1024 LPGLFGSSALSPHPTKGGYAVTDFLTYN 1051
Score = 58 (25.5 bits), Expect = 2.4e-41, Sum P(3) = 2.4e-41
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 209 SMDANEVEFRLKHDPKQVQVATDNF--LSSYDILILDEVHERHLY 251
S+D +V+F+L+H Q+Q AT + L+ + +L V R LY
Sbjct: 763 SVDIQDVKFQLRHSLDQLQAATSSAQDLTRDQMALLKLVLGRGLY 807
Score = 52 (23.4 bits), Expect = 2.0e-238, Sum P(6) = 2.0e-238
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 1096 ESMDANEVEFRLKHDPKQVQVAADN 1120
+S+D +V+F+L+H Q+Q A +
Sbjct: 762 DSVDIQDVKFQLRHSLDQLQAATSS 786
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 1346 (478.9 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 259/462 (56%), Positives = 340/462 (73%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 265 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSY 324
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRT--KSEKLDPGPYIRILSIIDKKYPRTERGD 427
F+ A +++VPGRL+PI + Y P E D+T KSEKLDP P++R+L ID KYP ERGD
Sbjct: 325 FSH-APVVQVPGRLFPITVVYQP-QEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGD 382
Query: 428 VLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
+L+F+SG++EI++++ AAQ Y +Q W+VLPLHS LS+ +QD+VF AP G+RKCI+ST
Sbjct: 383 LLVFLSGMAEITTVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILST 442
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETS+TIDGIRFVVDSGKVKEMSYD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC
Sbjct: 443 NIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVC 502
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRS 607
YRLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP ++E+++
Sbjct: 503 YRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILY 562
Query: 608 LTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTN 667
L + GA+DS E +T +G L+ LPVD+ +GKML+ GSMF + VL++AA LSVQSPFT
Sbjct: 563 LQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTR 622
Query: 668 RAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRV-RSKKWCKRRGIEEQRFYEV 726
A + DC TAR+ LES+ GDP T+ N + W+ VK +R S+KWC+RRG+EE R YE+
Sbjct: 623 SAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEM 682
Query: 727 TKLRSQFKQVLGDSGLIT--DIPGPDASLSS----RERALRH 762
LR QFK++L D GL++ + P S S RER H
Sbjct: 683 ANLRRQFKELLEDHGLLSGAQVVAPGDSYSRLQQRRERRALH 724
Score = 430 (156.4 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 81/139 (58%), Positives = 105/139 (75%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
+ P E++ L YLDF+QK+ F L K++ + +LP+AQY I+ T+ + +VV++A
Sbjct: 127 LPPERVSEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVA 186
Query: 61 GDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK 120
GDTGCGKSTQ+PQYL+ AGF +ACTQPRRIACISL+KRV +E+LSQY + VGYQIRFE
Sbjct: 187 GDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES 246
Query: 121 HRREKTKIVFITEGLLLRQ 139
R TKIVF+T GLLLRQ
Sbjct: 247 TRSAATKIVFLTVGLLLRQ 265
Score = 328 (120.5 bits), Expect = 1.2e-105, Sum P(6) = 1.2e-105
Identities = 63/157 (40%), Positives = 99/157 (63%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVCYRLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP +
Sbjct: 496 RTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPAS 555
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L + GA+DS E +T +G L+ LPVD+ +GKML+ GSMF + +L + AL+
Sbjct: 556 VETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALS 615
Query: 929 FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFH 965
+ ++ ++L + P++ G ++F+
Sbjct: 616 VQSPFTRSAQSNLDCATARRPLESDQGDPFTLFNVFN 652
Score = 323 (118.8 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 75/167 (44%), Positives = 104/167 (62%)
Query: 1186 STARSHKDVT-----ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFS 1240
+ A S +D+T +LK++L GLYPQ+A+ D FN+ + +FH + K LHP
Sbjct: 784 AAASSAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHPTC 843
Query: 1241 VFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPAL 1300
VF + P+VL + G + GR+ +S KHQLL ++SLLET+KP+LVNC+R+PAL
Sbjct: 844 VFANSPEVLHTQGQE-ASGQEGSQ-DGRDQMSCKHQLLAFVSLLETNKPYLVNCVRIPAL 901
Query: 1301 QTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSL 1347
Q+LLLFS +I TN D +RLV D W+E LQ A S + V L SL
Sbjct: 902 QSLLLFSRSIDTNGDCSRLVADGWLE----LQLADSESAVRLLATSL 944
Score = 187 (70.9 bits), Expect = 1.3e-81, Sum P(4) = 1.3e-81
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 265 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSY 324
Query: 1175 FN 1176
F+
Sbjct: 325 FS 326
Score = 122 (48.0 bits), Expect = 2.9e-84, Sum P(6) = 2.9e-84
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVT 989
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF + +L + AL+ + ++ +
Sbjct: 567 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQS 626
Query: 990 SLGRFLSDLPVDIPLGKMLVFGSMFH 1015
+L + P++ G ++F+
Sbjct: 627 NLDCATARRPLESDQGDPFTLFNVFN 652
Score = 122 (48.0 bits), Expect = 2.9e-84, Sum P(6) = 2.9e-84
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVT 1039
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF + +L + AL+ + ++ +
Sbjct: 567 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQS 626
Query: 1040 SLGRFLSDLPVDIPLGKMLVFGSMFH 1065
+L + P++ G ++F+
Sbjct: 627 NLDCATARRPLESDQGDPFTLFNVFN 652
Score = 120 (47.3 bits), Expect = 4.6e-84, Sum P(6) = 4.6e-84
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF + +L + AL+
Sbjct: 567 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALS 615
Score = 112 (44.5 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 272 LPQYQVLIVDEVHERHLHNDFLLGVLQRLL 301
Score = 105 (42.0 bits), Expect = 8.3e-236, Sum P(6) = 8.3e-236
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 265 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVL 297
Score = 75 (31.5 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1346 SLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPGSNPFVAEFPMVVEETLG 1405
+L+R+L+QFM A + Y +RRL + + +Y + P + T G
Sbjct: 985 ALSRELLQFM--AAKVPYRLRRLTGLEAQNLYVGPQTITTAPSLPGLFGNSTLSPHPTKG 1042
Query: 1406 GVRVTPYLVYD 1416
G V+ YL Y+
Sbjct: 1043 GYAVSDYLTYN 1053
Score = 66 (28.3 bits), Expect = 1.5e-236, Sum P(6) = 1.5e-236
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 1093 ERLESMDANEVEFRLKHDPKQVQVAADN 1120
+R +S+D +V+F+L+H+ +Q+Q AA +
Sbjct: 761 QRADSVDIQDVKFKLRHNLEQLQAAASS 788
Score = 58 (25.5 bits), Expect = 2.4e-39, Sum P(3) = 2.4e-39
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 209 SMDANEVEFRLKHDPKQVQVATDNF--LSSYDILILDEVHERHLY 251
S+D +V+F+L+H+ +Q+Q A + L+ + +L V R LY
Sbjct: 765 SVDIQDVKFKLRHNLEQLQAAASSAQDLTRDQLALLKLVLGRGLY 809
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 1348 (479.6 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 252/436 (57%), Positives = 331/436 (75%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ + L Y+VL++DE+HERHLH DFLLGV++ LL + ++K+ILMSATINI LF +Y
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSY 322
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPI-VELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
F+ A +++VPGRL+PI + Y P E +KSEKLDP P++R+L ID KYP ERGD+
Sbjct: 323 FSN-APVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDL 381
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
L+F+SG++EIS+++ AAQ Y +Q W+VLPLHS LS+ +QD+VF AP G+RKCI+STN
Sbjct: 382 LVFLSGMAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTN 441
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
IAETS+TIDGIRFVVDSGKVKEMSYD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC+
Sbjct: 442 IAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCF 501
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLY+E Y A Y PEIRRV++DSL+L + M +GD R FPF+E PP ++E+++ L
Sbjct: 502 RLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 561
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ VL++AA LSVQSPFT
Sbjct: 562 RDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRS 621
Query: 669 AFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR-SKKWCKRRGIEEQRFYEVT 727
A P+C AR+ LES+ GDP T+ N + W+ VK +R R S+KWC+RRGIEE R YE+
Sbjct: 622 AQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMA 681
Query: 728 KLRSQFKQVLGDSGLI 743
LR QFK++L D GL+
Sbjct: 682 NLRRQFKELLEDHGLL 697
Score = 423 (154.0 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 80/132 (60%), Positives = 102/132 (77%)
Query: 8 EWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGK 67
E++ L YLDF QK+ F L K++ + +LP+AQY I+ T+ + +VV++AGDTGCGK
Sbjct: 132 EFRRALLHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGK 191
Query: 68 STQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTK 127
STQ+PQYL+ AGF +ACTQPRRIACISL+KRV +E+LSQY + VGYQIRFE R TK
Sbjct: 192 STQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATK 251
Query: 128 IVFITEGLLLRQ 139
IVF+T GLLLRQ
Sbjct: 252 IVFLTVGLLLRQ 263
Score = 326 (119.8 bits), Expect = 7.4e-105, Sum P(6) = 7.4e-105
Identities = 59/120 (49%), Positives = 84/120 (70%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++DSL+L + M +GD R FPF+E PP +
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPAS 553
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 554 LETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 613
Score = 322 (118.4 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 71/158 (44%), Positives = 102/158 (64%)
Query: 1190 SHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVL 1249
S + + +LK++L GLYPQ+A+ D FN+S + +FH + K LHP VF P+VL
Sbjct: 793 SREQLALLKLVLGRGLYPQLAVPDAFNSSRKDSDQIFHTQAKQGAVLHPTCVFAGSPEVL 852
Query: 1250 RISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSA 1309
E + + G + ++ +SSKHQLL ++SLLET+KP+LVNC+R+PALQ+LLLFS +
Sbjct: 853 HAQELEASNCD-GSR-DDKDKMSSKHQLLSFVSLLETNKPYLVNCVRIPALQSLLLFSRS 910
Query: 1310 IHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSL 1347
+ TN D +RLV D W+E LQ A S + + L SL
Sbjct: 911 LDTNGDCSRLVADGWLE----LQLADSESAIRLLAASL 944
Score = 190 (71.9 bits), Expect = 7.0e-82, Sum P(4) = 7.0e-82
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y+VL++DE+HERHLH DFLLGV++ LL + ++K+ILMSATINI LF +Y
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSY 322
Query: 1175 FN 1176
F+
Sbjct: 323 FS 324
Score = 124 (48.7 bits), Expect = 6.7e-84, Sum P(6) = 6.7e-84
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 613
Score = 124 (48.7 bits), Expect = 6.7e-84, Sum P(6) = 6.7e-84
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 613
Score = 124 (48.7 bits), Expect = 6.7e-84, Sum P(6) = 6.7e-84
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 613
Score = 114 (45.2 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y+VL++DE+HERHLH DFLLGV++ LL
Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 107 (42.7 bits), Expect = 1.7e-235, Sum P(6) = 1.7e-235
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y++LI+DEVHERHL+ DFLLGV+
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVL 295
Score = 83 (34.3 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 1331 LQEAKSTADVNQLE-HSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPGS 1389
L+E + V+ E +L+++L+QF +A+ + YS+RRL +++ MY P
Sbjct: 966 LEEEEEDTPVSPKEVATLSKELLQF--TASKIPYSLRRLTGLEVQNMYVGPQTIPATPHL 1023
Query: 1390 NPFVAEFPMVVEETLGGVRVTPYLVYD 1416
+ T GG VT +L Y+
Sbjct: 1024 PGLFGSSTLSPHPTKGGYAVTDFLTYN 1050
Score = 61 (26.5 bits), Expect = 2.0e-68, Sum P(4) = 2.0e-68
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 210 MDANEVEFRLKHDPKQVQVATDNF--LSSYDILILDEVHERHLY 251
+D +V+F+L+HD Q+Q A + LS + +L V R LY
Sbjct: 766 VDIQDVKFKLRHDLAQLQAAASSAQDLSREQLALLKLVLGRGLY 809
Score = 59 (25.8 bits), Expect = 3.1e-236, Sum P(6) = 3.1e-236
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 1096 ESMDANEVEFRLKHDPKQVQVAADN 1120
+ +D +V+F+L+HD Q+Q AA +
Sbjct: 764 DGVDIQDVKFKLRHDLAQLQAAASS 788
Score = 39 (18.8 bits), Expect = 8.4e-57, Sum P(5) = 8.4e-57
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLS--LVCMGLGDVRKF-PFLEAPPA-ENIES 603
+R SEE+ +++ PE RR+ D+ + G + +KF F E +N+++
Sbjct: 16 HRAPSEEEALEKWDWNCPETRRLLEDAFFREEDYIRQGSEECQKFWTFFERLQRFQNLKT 75
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLP 631
S + G K + +L +DLP
Sbjct: 76 SRKEEKDPG--QPKHSIPAL----ADLP 97
Score = 38 (18.4 bits), Expect = 3.3e-41, Sum P(4) = 3.3e-41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 816 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLS--LVCMGLGDVRKF-PFLEAPPA-ENIES 871
+R SEE+ +++ PE RR+ D+ + G + +KF F E +N+++
Sbjct: 16 HRAPSEEEALEKWDWNCPETRRLLEDAFFREEDYIRQGSEECQKFWTFFERLQRFQNLKT 75
Query: 872 S 872
S
Sbjct: 76 S 76
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 1354 (481.7 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 253/442 (57%), Positives = 330/442 (74%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 262 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSY 321
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPI-VELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
F A +++VPGRL+PI + Y P E +KSEKLDPGP++R+L ID KYP ERGD+
Sbjct: 322 FGT-APVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDL 380
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
L+F+SG++EISS++ AAQ Y ++Q W+VLPLHS LS+ +QD+VF AP G+RKCI+STN
Sbjct: 381 LVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTN 440
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
IAETS+TIDGIRFVVDSGKVKEM YD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC+
Sbjct: 441 IAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCF 500
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP ++E+++ L
Sbjct: 501 RLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETAILYL 560
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + VL++AA LSVQSPFT
Sbjct: 561 QDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRS 620
Query: 669 AFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR-SKKWCKRRGIEEQRFYEVT 727
A +P+C AR+ LES+ GDP T+ N + W+ VK +R R S+KWC+ RGIEE R YE+
Sbjct: 621 AQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMA 680
Query: 728 KLRSQFKQVLGDSGLITDIPGP 749
LR QFK++L D GL+ P
Sbjct: 681 NLRRQFKELLEDHGLLARAQAP 702
Score = 428 (155.7 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 81/137 (59%), Positives = 104/137 (75%)
Query: 3 PALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
P E++ L YLDF QK+ F L K++ + +LP+AQY I+ T+ + +VV++AGD
Sbjct: 126 PERVTEFRRALLHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGD 185
Query: 63 TGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR 122
TGCGKSTQ+PQYL+ AGF +ACTQPRRIACISL+KRV++E+LSQY + VGYQIRFE R
Sbjct: 186 TGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTR 245
Query: 123 REKTKIVFITEGLLLRQ 139
TKIVF+T GLLLRQ
Sbjct: 246 TAATKIVFLTVGLLLRQ 262
Score = 328 (120.5 bits), Expect = 7.0e-104, Sum P(6) = 7.0e-104
Identities = 59/120 (49%), Positives = 84/120 (70%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP +
Sbjct: 493 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPAS 552
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 553 LETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 612
Score = 326 (119.8 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 76/176 (43%), Positives = 111/176 (63%)
Query: 1177 RIAKDLLSGSTARSHKDVT-----ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDK 1231
R + D L +T+ S +D+T +LK++L GLYPQ+A+ D FN+S + +FH + K
Sbjct: 769 RHSLDQLQAATS-SAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSK 827
Query: 1232 GFVSLHPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
LHP +F + P+VL E + G + ++ +SSKHQLL ++SLLET+KP+L
Sbjct: 828 QGTVLHPTCIFANSPEVLHAQEQE-ARGSEGSQ-DDKDKMSSKHQLLTFVSLLETNKPYL 885
Query: 1292 VNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSL 1347
VNC+R+PALQ+LLLFS ++ TN D +RLV D W+E LQ A S + V L S+
Sbjct: 886 VNCVRIPALQSLLLFSRSLDTNGDCSRLVADGWLE----LQLADSESAVRLLAASV 937
Score = 187 (70.9 bits), Expect = 3.4e-81, Sum P(4) = 3.4e-81
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSATINI LF +Y
Sbjct: 262 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSY 321
Query: 1175 F 1175
F
Sbjct: 322 F 322
Score = 129 (50.5 bits), Expect = 3.1e-83, Sum P(6) = 3.1e-83
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 564 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 612
Score = 129 (50.5 bits), Expect = 3.1e-83, Sum P(6) = 3.1e-83
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 564 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 612
Score = 129 (50.5 bits), Expect = 3.1e-83, Sum P(6) = 3.1e-83
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 564 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 612
Score = 113 (44.8 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 269 LPQYQVLIVDEVHERHLHNDFLLGVLRRLL 298
Score = 105 (42.0 bits), Expect = 9.3e-235, Sum P(6) = 9.3e-235
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 262 QIQREPSLPQYQVLIVDEVHERHLHNDFLLGVL 294
Score = 70 (29.7 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 1329 VPLQEAKSTADVNQLEHSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPG 1388
V +E ++ D ++ H L+RDL+QF++S R +++ +Y + P
Sbjct: 962 VDQEEEEAPVDPKEVAH-LSRDLLQFVASKVVKGVQARET-GLEVQNLYVGPQTITAAPS 1019
Query: 1389 SNPFVAEFPMVVEETLGGVRVTPYLVYD 1416
+ T GG VT +L Y+
Sbjct: 1020 LPGLFGSSALSPHPTKGGYAVTDFLTYN 1047
Score = 58 (25.5 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 209 SMDANEVEFRLKHDPKQVQVATDNF--LSSYDILILDEVHERHLY 251
S+D +V+F+L+H Q+Q AT + L+ + +L V R LY
Sbjct: 758 SVDIQDVKFQLRHSLDQLQAATSSAQDLTRDQMALLKLVLGRGLY 802
Score = 52 (23.4 bits), Expect = 1.3e-235, Sum P(6) = 1.3e-235
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 1096 ESMDANEVEFRLKHDPKQVQVAADN 1120
+S+D +V+F+L+H Q+Q A +
Sbjct: 757 DSVDIQDVKFQLRHSLDQLQAATSS 781
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 1383 (491.9 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 261/451 (57%), Positives = 341/451 (75%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ D L Y VL++DE+HERHLH DFLLGV++ LL +++++LMSATINI+LF +Y
Sbjct: 263 QIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSY 322
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDR-TKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
FN A +++VPGRL+PIQ+ Y PI ++ ++SEKLDP PY+R+L ID++YP+ ERGD+
Sbjct: 323 FND-APVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDL 381
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
L+F+SG++EIS+I A Q Y +Q WIVLPLHSTLSL +QD+VF AP G+RKCI+STN
Sbjct: 382 LLFLSGVAEISTIQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTN 441
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
IAETS+TIDG+RFVVDSGKVKEMS+D AKM LQEFWIS+AS+EQRKGRAGRTGPGVCY
Sbjct: 442 IAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCY 501
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLYSE Y A Y PEI RV++DSL+L + MGLGD R F F++ PPA +I+++V L
Sbjct: 502 RLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYL 561
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
+ GA+D +TS+GR L+ LPVD+ +GKMLV GS+F+ ++ VL++AA LSVQSPF
Sbjct: 562 REQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLRS 621
Query: 669 AFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR-SKKWCKRRGIEEQRFYEVT 727
A +PDC TAR+ L SNHGDP T++N + W+ VK DR S+KWC+RRG+EEQR YE+
Sbjct: 622 AQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMV 681
Query: 728 KLRSQFKQVLGDSGLITDIPGPDASLSSRER 758
LR QFK++L GL+ D G R R
Sbjct: 682 NLRRQFKELLRSHGLLEDDTGRATEPQDRAR 712
Score = 423 (154.0 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 79/130 (60%), Positives = 102/130 (78%)
Query: 10 KLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKST 69
+L L +LDF QK+ FS L K+R Q SLP+ QY+ +I++ V VV++AGDTGCGKST
Sbjct: 134 RLALLHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKST 193
Query: 70 QIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIV 129
Q+PQYL+ +G IACTQPRRIACISL+KRV++E+L+QY + VGYQIRFE R TK++
Sbjct: 194 QVPQYLLASGINNIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLL 253
Query: 130 FITEGLLLRQ 139
F+TEGLLLRQ
Sbjct: 254 FLTEGLLLRQ 263
Score = 331 (121.6 bits), Expect = 1.8e-100, Sum P(6) = 1.8e-100
Identities = 61/120 (50%), Positives = 86/120 (71%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVCYRLYSE Y A Y PEI RV++DSL+L + MGLGD R F F++ PPA +
Sbjct: 494 RTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASS 553
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
I+++V L + GA+D +T++GR L+ LPVD+ +GKMLV GS+F+ ++ +L + AL+
Sbjct: 554 IQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALS 613
Score = 301 (111.0 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 65/162 (40%), Positives = 103/162 (63%)
Query: 1166 INIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEAL 1225
+ +L H N + + + S A S +LK++L GLYPQ+AI DE N + + +
Sbjct: 780 VKFKLRHNV-NELQESAYA-SAALSSLQQALLKLLLCRGLYPQLAIPDEHNATRKDSDQV 837
Query: 1226 FHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLE 1285
FH ++K V +HP SVF S P+VL + E + + G+ S++HQLL +++LLE
Sbjct: 838 FHTRNKQGVVIHPTSVFASDPEVLHVPEHETSEF-------GQ---SNRHQLLAFVTLLE 887
Query: 1286 TSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEV 1327
T+KP+L NC+R+PALQ LLL ++++++N+D TRLV D W+E+
Sbjct: 888 TNKPYLSNCVRVPALQALLLVANSVNSNADCTRLVVDGWLEL 929
Score = 192 (72.6 bits), Expect = 2.3e-77, Sum P(4) = 2.3e-77
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ D L Y VL++DE+HERHLH DFLLGV++ LL +++++LMSATINI+LF +Y
Sbjct: 263 QIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSY 322
Query: 1175 FN 1176
FN
Sbjct: 323 FN 324
Score = 178 (67.7 bits), Expect = 1.2e-216, Sum P(5) = 1.2e-216
Identities = 48/125 (38%), Positives = 75/125 (60%)
Query: 1272 SSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPL 1331
S++HQLL +++LLET+KP+L NC+R+PALQ LLL ++++++N+D TRLV D W+E+
Sbjct: 874 SNRHQLLAFVTLLETNKPYLSNCVRVPALQALLLVANSVNSNADCTRLVVDGWLEL---- 929
Query: 1332 QEAKSTADVNQLEHSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGA--ESGVPGS 1389
S D + ++ +SSA L RLL A L R++G+ +G S
Sbjct: 930 ----SLTDGDAA--------LKVLSSALSLRAEWERLLQAQL----RQSGSCSSAGFGSS 973
Query: 1390 NPFVA 1394
P V+
Sbjct: 974 GPRVS 978
Score = 122 (48.0 bits), Expect = 8.5e-79, Sum P(6) = 8.5e-79
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+D +TS+GR L+ LPVD+ +GKMLV GS+F+ ++ +L + AL+
Sbjct: 565 GALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALS 613
Score = 122 (48.0 bits), Expect = 8.5e-79, Sum P(6) = 8.5e-79
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+D +TS+GR L+ LPVD+ +GKMLV GS+F+ ++ +L + AL+
Sbjct: 565 GALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALS 613
Score = 122 (48.0 bits), Expect = 8.5e-79, Sum P(6) = 8.5e-79
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+D +TS+GR L+ LPVD+ +GKMLV GS+F+ ++ +L + AL+
Sbjct: 565 GALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALS 613
Score = 116 (45.9 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ D L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 264 IQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLL 299
Score = 107 (42.7 bits), Expect = 5.0e-234, Sum P(6) = 5.0e-234
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ D L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 263 QIQQDASLGQYQVLIVDEVHERHLHCDFLLGVL 295
Score = 59 (25.8 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 1342 QLEHSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPGSNPFVAEFPMVVE 1401
+LE L LV+F+ T + YS++RL A + +Y + + + + FP +
Sbjct: 981 ELE-KLCEGLVRFLLY-TEVNYSLKRLTALQSQNLYIGPQQDPDLSSAAAIGSLFPGMKA 1038
Query: 1402 ET---LGGVRVTPYLVYD 1416
E GG+R+ Y Y+
Sbjct: 1039 EPDPIKGGLRLCSYFTYN 1056
Score = 55 (24.4 bits), Expect = 5.7e-235, Sum P(6) = 5.7e-235
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 1096 ESMDANEVEFRLKHDPKQVQVAA 1118
++MD EV+F+L+H+ ++Q +A
Sbjct: 773 QTMDIQEVKFKLRHNVNELQESA 795
Score = 51 (23.0 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 209 SMDANEVEFRLKHDPKQVQVAT--DNFLSSYDILILDEVHERHLY 251
+MD EV+F+L+H+ ++Q + LSS +L + R LY
Sbjct: 774 TMDIQEVKFKLRHNVNELQESAYASAALSSLQQALLKLLLCRGLY 818
Score = 49 (22.3 bits), Expect = 3.9e-51, Sum P(4) = 3.9e-51
Identities = 24/111 (21%), Positives = 48/111 (43%)
Query: 1218 SETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQL 1277
+ +++ A+ + +++G + H TS + R+ VD G L +V + +
Sbjct: 551 ASSIQTAVTYLREQGALDEH--GELTS---IGRLLAQLPVDVVIGKMLVLGSVFNLVEPV 605
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRL-VFDSWIEV 1327
L + L PFL + P T ++ H FT + F++W++V
Sbjct: 606 LTVAAALSVQSPFLRSAQHNPDCSTARQPLNSNH-GDPFTLMNTFNAWVQV 655
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 1308 (465.5 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 255/453 (56%), Positives = 329/453 (72%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSAT+N LF YF + A +
Sbjct: 270 LPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQ-APV 328
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKS--EKLDPGPYIRILSIIDKKYPRTERGDVLIFMSG 434
++VPGRL+PI + Y P E + T S EKLDP P+IR+L ID KYP ERGD+L+F+SG
Sbjct: 329 VQVPGRLFPITVVYQP-QEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSG 387
Query: 435 ISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSI 494
++EI +++ AAQ + +S W+VLPLHSTLS+ QD+VF AP G+RKCI+STNIAETS+
Sbjct: 388 LAEIGAVLEAAQAHARRSGRWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSV 447
Query: 495 TIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEE 554
TIDGIRFVVDSGKVKEMSYD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC+RLY+E
Sbjct: 448 TIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAES 507
Query: 555 QYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAI 614
Y A Y PEIRRV++D+L+L + M +GD R FPF+E PPA ++E+++ L GA+
Sbjct: 508 DYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGAL 567
Query: 615 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPD 674
D E +T +G L+ LPVDI +GKMLV GS+ H + VL++AA LSVQSPFT +P
Sbjct: 568 DGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSPFTRSTRSNPK 627
Query: 675 CETARKELESNHGDPLTVLNAYKEWLGVKKDR-VRSKKWCKRRGIEEQRFYEVTKLRSQF 733
C A + LES+HGDP T+ N + W+ VK DR +S++WC+R GIEE R YE+ LR QF
Sbjct: 628 C--AWRALESDHGDPFTLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLRRQF 685
Query: 734 KQVLGDSGLI--TDIPGPDASLSSRERALRHGE 764
K++L D GL+ T P P S S R +H E
Sbjct: 686 KELLEDHGLLAGTQAPKPGDSYS---RLRQHRE 715
Score = 415 (151.1 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 78/138 (56%), Positives = 104/138 (75%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
+ P E++ L YLDF QK+ F+ L +++ + +LP++QY+ I+ T+ + +VV++A
Sbjct: 125 LPPERVSEFRGALLHYLDFGQKQAFARLARLQRERAALPISQYRDRILQTLKEHQVVVVA 184
Query: 61 GDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK 120
GDTGCGKSTQ+PQYL+ AGF +ACTQPRRIACISL+KRV E+LSQY + VGYQIRFE
Sbjct: 185 GDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFES 244
Query: 121 HRREKTKIVFITEGLLLR 138
R TKIVF+T GLLLR
Sbjct: 245 TRSAATKIVFLTVGLLLR 262
Score = 346 (126.9 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 83/189 (43%), Positives = 117/189 (61%)
Query: 1180 KDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPF 1239
++ S + R+ +T+LK++LA GLYPQ AI D FN+S + +FH + K LHP
Sbjct: 780 QEAASSAQVRTRDQMTLLKLVLARGLYPQFAIPDPFNSSRKDSDQIFHTQAKQGAVLHPT 839
Query: 1240 SVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPA 1299
VF + P+VL E + + G + R+ +SSKHQLL ++SLLETSKP+LVNC+R+PA
Sbjct: 840 CVFANSPEVLHPQEPEATEGK-GSQ-DNRDPMSSKHQLLAFVSLLETSKPYLVNCVRVPA 897
Query: 1300 LQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSAT 1359
LQ+LLLFS ++ TN D +RLV D W+E LQ A + V L +L R Q+ S+
Sbjct: 898 LQSLLLFSRSLDTNGDCSRLVADGWLE----LQLADGESAVRLLAATL-RLRAQWESAMD 952
Query: 1360 -HLAYSIRR 1367
LA + RR
Sbjct: 953 GQLAQARRR 961
Score = 321 (118.1 bits), Expect = 2.8e-105, Sum P(6) = 2.8e-105
Identities = 59/120 (49%), Positives = 83/120 (69%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PPA +
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPAAS 553
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+D E +T +G L+ LPVDI +GKMLV GS+ H + +L + AL+
Sbjct: 554 LETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALS 613
Score = 173 (66.0 bits), Expect = 1.0e-81, Sum P(4) = 1.0e-81
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
L Y VL++DE+HERHLH DFLLGV++ LL ++K+ILMSAT+N LF YF +
Sbjct: 270 LPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQ 325
Score = 117 (46.2 bits), Expect = 4.1e-84, Sum P(6) = 4.1e-84
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+D E +T +G L+ LPVDI +GKMLV GS+ H + +L + AL+
Sbjct: 565 GALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALS 613
Score = 117 (46.2 bits), Expect = 4.1e-84, Sum P(6) = 4.1e-84
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+D E +T +G L+ LPVDI +GKMLV GS+ H + +L + AL+
Sbjct: 565 GALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALS 613
Score = 117 (46.2 bits), Expect = 4.1e-84, Sum P(6) = 4.1e-84
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+D E +T +G L+ LPVDI +GKMLV GS+ H + +L + AL+
Sbjct: 565 GALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAALS 613
Score = 110 (43.8 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 270 LPQYRVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 99 (39.9 bits), Expect = 6.4e-232, Sum P(6) = 6.4e-232
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 270 LPQYRVLIVDEVHERHLHNDFLLGVL 295
Score = 83 (34.3 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 1346 SLTRDLVQFMSSATHLAYSIRRLLAADLKTMY---RRTGAESGVPGSNPFVAEFPMVVEE 1402
+L+++L+QFM+S ++YS+RRL +++ +Y + A +PG A P
Sbjct: 985 ALSKELLQFMASK--VSYSLRRLTGLEVQNLYVGPQTITAAPSLPGLFGSSATSP---HP 1039
Query: 1403 TLGGVRVTPYLVYD 1416
T GG VT +L Y+
Sbjct: 1040 TKGGYAVTDFLTYN 1053
Score = 59 (25.8 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 210 MDANEVEFRLKHDPKQVQVATDNF-LSSYD-ILILDEVHERHLYGDFLL 256
+D +V+F+L+HD +Q+Q A + + + D + +L V R LY F +
Sbjct: 763 VDIQDVKFKLRHDLEQLQEAASSAQVRTRDQMTLLKLVLARGLYPQFAI 811
Score = 57 (25.1 bits), Expect = 4.5e-233, Sum P(6) = 4.5e-233
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 1098 MDANEVEFRLKHDPKQVQVAADN 1120
+D +V+F+L+HD +Q+Q AA +
Sbjct: 763 VDIQDVKFKLRHDLEQLQEAASS 785
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 1384 (492.3 bits), Expect = 9.7e-233, Sum P(5) = 9.7e-233
Identities = 264/485 (54%), Positives = 365/485 (75%)
Query: 297 LLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIIL 356
+L + + LL + VAA+ L YD L+LDEIHER+L GDFLLGV KCLL + ++K+IL
Sbjct: 236 ILFITEGLLLRQLAVAAN--LDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLIL 293
Query: 357 MSATINIELFHTYFNRI-AKIIKVPGRLYPIQLEY--HPIVELD-------RTKSEKLDP 406
MSATIN+ELFH YF A++++VPGRL+PI+L Y P +EL R++ ++DP
Sbjct: 294 MSATINVELFHGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDP 353
Query: 407 GPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSL 466
P++++LS+ID++YP +ERGDVLIF+SG++EI S+V A EY + W+VLPLHS ++
Sbjct: 354 APFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTHWLVLPLHSGQAI 413
Query: 467 EEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFW 526
+Q +VF YAPEG+RKCIVSTNIAETS+T+DG+RFVVDSGKVKEM++D T K L+EFW
Sbjct: 414 ADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFW 473
Query: 527 ISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGD 586
+SK+SA+QRKGRAGRTGPGVC+RLY+ EQY+ Y TPEI RV +D++LL +V MGL D
Sbjct: 474 VSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPD 533
Query: 587 VRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMF 646
VR FPF+EAP E IE ++ +L QH A+ +E++T LGR L++LPV++ +GKML+ GS+F
Sbjct: 534 VRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVF 593
Query: 647 HQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDR 706
+++ +L+LAA+LSVQ+P TNRA D C R+ LES+HGD T++ Y W+ +K R
Sbjct: 594 PEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRR 653
Query: 707 VRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRHGEIK 766
+++WC+R GIEEQRFYEVTKLR QF+++L G++ D+ L+S ERA RHGE++
Sbjct: 654 DGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVV-ASDSDSQLTSAERATRHGELR 712
Query: 767 LLQAI 771
L+A+
Sbjct: 713 QLKAM 717
Score = 411 (149.7 bits), Expect = 9.7e-233, Sum P(5) = 9.7e-233
Identities = 74/135 (54%), Positives = 105/135 (77%)
Query: 5 LYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTG 64
+ +++ +L YLDF+Q EKF + K+R+TQ +LP+A++++++ + + RVVI+AGDTG
Sbjct: 113 MQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTG 172
Query: 65 CGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE 124
CGKSTQ+PQYL G++ IACTQPRR+AC+SL KRVA+E L Y + V +QIRFE+ R +
Sbjct: 173 CGKSTQVPQYLYDFGYRSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTK 232
Query: 125 KTKIVFITEGLLLRQ 139
T I+FITEGLLLRQ
Sbjct: 233 LTNILFITEGLLLRQ 247
Score = 336 (123.3 bits), Expect = 2.6e-102, Sum P(5) = 2.6e-102
Identities = 62/120 (51%), Positives = 89/120 (74%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+ EQY+ Y TPEI RV +D++LL +V MGL DVR FPF+EAP E
Sbjct: 488 RTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETER 547
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
IE ++ +L QH A+ +E++T LGR L++LPV++ +GKML+ GS+F +++ +L L L+
Sbjct: 548 IEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLS 607
Score = 330 (121.2 bits), Expect = 9.7e-233, Sum P(5) = 9.7e-233
Identities = 65/141 (46%), Positives = 94/141 (66%)
Query: 1191 HKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLR 1250
H V +LK++L SG YPQ+AI DEFN + + FH + K FV HP S F ++L+
Sbjct: 780 HSVVVLLKLLLGSGFYPQLAISDEFNYCKGGGQQFFHTRLKPFVLQHPNSQFAKHFELLK 839
Query: 1251 ISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAI 1310
++E D++ P P P + +S +HQLL Y SLLET+KP+L+NC+R+PA QTLLLFS AI
Sbjct: 840 LTESDLL-PKPDFYTP-KLPLSKRHQLLCYQSLLETAKPYLINCIRLPAAQTLLLFSFAI 897
Query: 1311 HTNSDFTRLVFDSWIEVFVPL 1331
TN+ T++ D W+ + +P+
Sbjct: 898 DTNAGITQIACDGWLGLDLPM 918
Score = 213 (80.0 bits), Expect = 3.7e-80, Sum P(3) = 3.7e-80
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 1112 KQVQVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELF 1171
+Q+ VAA+ L YD L+LDEIHER+L GDFLLGV KCLL + ++K+ILMSATIN+ELF
Sbjct: 246 RQLAVAAN--LDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELF 303
Query: 1172 HTYF 1175
H YF
Sbjct: 304 HGYF 307
Score = 147 (56.8 bits), Expect = 1.7e-213, Sum P(5) = 1.7e-213
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 1295 LRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQF 1354
L MP + L AI ++RL++D ++ QE+ S + ++ +L +DLV +
Sbjct: 916 LPMPG-SGMELLRRAIELRRRWSRLLYDK-LDDLKSKQESPSHSSDDR-SSALWQDLVDY 972
Query: 1355 MSSATHLAYSIRRLLAADLKTMYRRTGAESGVPG--SNPFVAEFPMVVEETLGGVRVTPY 1412
M A +AY+IRRLL AD+K +Y + + NPF +FPM E GG+ V+ +
Sbjct: 973 M--ALDVAYAIRRLLPADIKRLYTHQAPSARLAELKENPFAVDFPMTPNEEKGGLNVSEH 1030
Query: 1413 LVY 1415
+VY
Sbjct: 1031 VVY 1033
Score = 125 (49.1 bits), Expect = 9.7e-233, Sum P(5) = 9.7e-233
Identities = 26/38 (68%), Positives = 30/38 (78%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
VAA+ L YD L+LDEIHER+L GDFLLGV KCLL +
Sbjct: 250 VAAN--LDQYDALILDEIHERNLFGDFLLGVTKCLLRA 285
Score = 110 (43.8 bits), Expect = 8.6e-79, Sum P(5) = 8.6e-79
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
A+ +E++T LGR L++LPV++ +GKML+ GS+F +++ +L L L+
Sbjct: 560 ALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLS 607
Score = 110 (43.8 bits), Expect = 8.6e-79, Sum P(5) = 8.6e-79
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
A+ +E++T LGR L++LPV++ +GKML+ GS+F +++ +L L L+
Sbjct: 560 ALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLS 607
Score = 110 (43.8 bits), Expect = 8.6e-79, Sum P(5) = 8.6e-79
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
A+ +E++T LGR L++LPV++ +GKML+ GS+F +++ +L L L+
Sbjct: 560 ALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLS 607
Score = 109 (43.4 bits), Expect = 4.7e-231, Sum P(5) = 4.7e-231
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 224 KQVQVATDNFLSSYDILILDEVHERHLYGDFLLGV 258
+Q+ VA + L YD LILDE+HER+L+GDFLLGV
Sbjct: 246 RQLAVAAN--LDQYDALILDEIHERNLFGDFLLGV 278
Score = 85 (35.0 bits), Expect = 9.9e-67, Sum P(3) = 9.9e-67
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 151 DASLSSRERALRHGEIKLLQAIXXXXXXXXXXXXXMLKADNAYXXXXXXXXXXXXXXXSM 210
D+ L+S ERA RHGE++ L+A+ +LK
Sbjct: 696 DSQLTSAERATRHGELRQLKAMKRRQRFEQPRQRKLLKQS---AGRVAEDEEEQEEAQGD 752
Query: 211 DANEVEFRLKHDPKQVQVAT-DNFLSSYDILIL 242
D +V+FRL+ DP+Q+ + + L + +++L
Sbjct: 753 DMRDVDFRLRFDPRQLALLERSSRLDRHSVVVL 785
Score = 58 (25.5 bits), Expect = 9.7e-233, Sum P(5) = 9.7e-233
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 1093 ERLESMDANEVEFRLKHDPKQVQVAA-DNFLSSYDVLVL 1130
E + D +V+FRL+ DP+Q+ + + L + V+VL
Sbjct: 747 EEAQGDDMRDVDFRLRFDPRQLALLERSSRLDRHSVVVL 785
Score = 41 (19.5 bits), Expect = 1.0e-40, Sum P(3) = 1.0e-40
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 708 RSKKWCKRRGIEEQRFYEVTKLRS 731
RSK CKRR +E R + T S
Sbjct: 1075 RSK--CKRRKAQESRTAKTTSTES 1096
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1274 KHQLLVYMSLLETSK 1288
+H LLVY+ +T K
Sbjct: 118 RHILLVYLDFRQTEK 132
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 1341 (477.1 bits), Expect = 1.1e-227, Sum P(5) = 1.1e-227
Identities = 253/446 (56%), Positives = 330/446 (73%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y VL++DE+HERHLH DFLLGV++ LL ++K++LMSATINI LF +YF A +
Sbjct: 270 LPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGN-APV 328
Query: 377 IKVPGRLYPIQLEYHPI-VELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGI 435
++VPGRL+PI + Y P E +KSEKLDP P++R+L ID KYP ERGD+L+F+SG+
Sbjct: 329 VQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGM 388
Query: 436 SEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSIT 495
+EIS+++ AQ Y +Q W+VLPLHS LS+ +QD+VF AP G+RKCI+STNIAETS+T
Sbjct: 389 AEISAVLEPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVT 448
Query: 496 IDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQ 555
IDGIRFVVDSGKVKEMSYD AK+ LQEFWIS+ASAEQRKGRAGRTGPGVC+RLY+E
Sbjct: 449 IDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESD 508
Query: 556 YSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAID 615
Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP ++E+++ L GA+D
Sbjct: 509 YDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRDQGALD 568
Query: 616 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDC 675
S E +T +G L+ LPVD+ +GKML+ GSMFH + VL++AA LSVQ+PFT A +P+C
Sbjct: 569 SSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQTPFTRSAQSNPEC 628
Query: 676 ETARKELESNHGDPLTVLNAYKEWLGVKKDRVR-SKKWCKRRGIEEQRFYEVTKLRSQFK 734
R+ LES+ GDP T+LN + W+ VK +R R S+KWC+ RGIEE R YE+ LR QFK
Sbjct: 629 AATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGIEEHRLYEMANLRRQFK 688
Query: 735 QVLGDSGLIT--DIPGPDASLSSRER 758
++L D GL+ P P S S +R
Sbjct: 689 ELLEDHGLLAGAQAPQPGDSYSRLQR 714
Score = 411 (149.7 bits), Expect = 1.1e-227, Sum P(5) = 1.1e-227
Identities = 79/139 (56%), Positives = 102/139 (73%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
+ P E++ L YLDF QK+ F L K++ + +LP+AQY I+ + + +VV++A
Sbjct: 125 LPPERASEFRQALLHYLDFCQKQAFGRLAKLQRERAALPIAQYGHHILQMLKEHQVVVVA 184
Query: 61 GDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK 120
GDTGCGKSTQ+PQYL+ AG +ACTQPRRIACISL+KRV +E+LSQY + VGYQIRFE
Sbjct: 185 GDTGCGKSTQVPQYLLAAGCSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES 244
Query: 121 HRREKTKIVFITEGLLLRQ 139
R TKIVF+T GLLLRQ
Sbjct: 245 TRSAATKIVFLTVGLLLRQ 263
Score = 340 (124.7 bits), Expect = 1.1e-227, Sum P(5) = 1.1e-227
Identities = 80/187 (42%), Positives = 117/187 (62%)
Query: 1184 SGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFT 1243
S + A + + +LK++L GLYPQ+A+ D FN+S + +FH + K V LHP VFT
Sbjct: 787 SSAQALTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQTKQGVVLHPTCVFT 846
Query: 1244 SQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTL 1303
+ P+VL +++ G + R+ +SSKHQL+ ++SLLET+KP+LVNC+R+PALQ+L
Sbjct: 847 NSPEVLH-AQEQAARGSDGSR-DDRDKMSSKHQLVTFVSLLETNKPYLVNCVRIPALQSL 904
Query: 1304 LLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSATH-LA 1362
LLFS ++ TN D +RLV D W+E LQ A + + V L SL R + S+ LA
Sbjct: 905 LLFSRSLDTNGDCSRLVADGWLE----LQLADTESAVRLLAASL-RLRAHWESALDRQLA 959
Query: 1363 YSIRRLL 1369
+ RR L
Sbjct: 960 HQARRRL 966
Score = 328 (120.5 bits), Expect = 6.2e-101, Sum P(5) = 6.2e-101
Identities = 59/120 (49%), Positives = 84/120 (70%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++D+L+L + M +GD R FPF+E PP +
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTS 553
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 554 LETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 613
Score = 183 (69.5 bits), Expect = 4.9e-78, Sum P(3) = 4.9e-78
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y VL++DE+HERHLH DFLLGV++ LL ++K++LMSATINI LF +Y
Sbjct: 263 QMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSY 322
Query: 1175 F 1175
F
Sbjct: 323 F 323
Score = 129 (50.5 bits), Expect = 3.2e-80, Sum P(5) = 3.2e-80
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 613
Score = 129 (50.5 bits), Expect = 3.2e-80, Sum P(5) = 3.2e-80
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 613
Score = 129 (50.5 bits), Expect = 3.2e-80, Sum P(5) = 3.2e-80
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMFH + +L + AL+
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALS 613
Score = 112 (44.5 bits), Expect = 1.1e-227, Sum P(5) = 1.1e-227
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y VL++DE+HERHLH DFLLGV++ LL
Sbjct: 270 LPQYQVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 103 (41.3 bits), Expect = 9.7e-227, Sum P(5) = 9.7e-227
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y +LI+DEVHERHL+ DFLLGV+
Sbjct: 263 QMQREPSLPQYQVLIVDEVHERHLHNDFLLGVL 295
Score = 92 (37.4 bits), Expect = 1.3e-201, Sum P(5) = 1.3e-201
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 1332 QEAKSTADVNQLE-HSLTRDLVQFMSSATHLAYSIRRLLAADLKTMYRRTGAESGVPGSN 1390
+E + A VN E +L+R+L+QFM+S ++YS+RRL + + +Y + P
Sbjct: 970 EEEEEEAPVNHKEVAALSRELLQFMTSK--VSYSLRRLTGLEAQNLYVGPQTITAAPSLP 1027
Query: 1391 PFVAEFPMVVEETLGGVRVTPYLVYD 1416
T GG VT +L Y+
Sbjct: 1028 GLFGNSTPSPHPTKGGYAVTDFLTYN 1053
Score = 56 (24.8 bits), Expect = 1.1e-227, Sum P(5) = 1.1e-227
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 1096 ESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEI 1133
+S+D +V+F+L+H+ +Q+ AA SS L D++
Sbjct: 764 DSVDIQDVKFKLRHNLEQLHAAA----SSAQALTRDQM 797
Score = 52 (23.4 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 209 SMDANEVEFRLKHDPKQVQVATDNF--LSSYDILILDEVHERHLY 251
S+D +V+F+L+H+ +Q+ A + L+ + +L V R LY
Sbjct: 765 SVDIQDVKFKLRHNLEQLHAAASSAQALTRDQMALLKLVLGRGLY 809
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 1136 (405.0 bits), Expect = 7.8e-152, Sum P(5) = 7.8e-152
Identities = 214/468 (45%), Positives = 324/468 (69%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ D+ L Y+V++LDE+HERHL D L+G+++ L ++K+ILMSATIN++LF Y
Sbjct: 174 QMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGY 233
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVE-LDRT--KSEKLDPGPYIRILSIIDKKYPRTERG 426
F A +++VPGRL+PI + +HPI + +D++ K+ K+DP PY++IL +IDK++P T+RG
Sbjct: 234 FEG-APVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRG 292
Query: 427 DVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVS 486
D LIF++G++EIS + + Y E + GWI+L LHSTLS+EEQD+VF AP G+RKCI+S
Sbjct: 293 DALIFLNGVAEISMVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKCILS 352
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TN+AETS+TIDGIRFV+DSGKV + ++ L EFW+SKASA QRKGRAGRTGPG+
Sbjct: 353 TNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGI 412
Query: 547 CYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLG-DVRKFPFLEAPPAENIESSV 605
CYRLYS+EQ+ + +++ EI RVS+ + L ++ + LG D R FPF+E P + + +
Sbjct: 413 CYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNEGL 472
Query: 606 RSLTQHGAIDSKE----RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
L + S +T+LG +S LPV++P+ KMLV+G + +++ +L++AA LSV
Sbjct: 473 EVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSV 532
Query: 662 QSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
QSPFTNR++R+ + R L S GDP T+++ ++EW+ K +++W GI+E
Sbjct: 533 QSPFTNRSYRELEIVERRASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEH 592
Query: 722 RFYEVTKLRSQFKQVLGDSGLITDIPGPDASLS-SRERALRHGEIKLL 768
R YE++KLR+Q++Q+L D+GL+ + SR+R + GE + L
Sbjct: 593 RLYEISKLRAQYRQILEDAGLVEKASAAETGEDDSRQRRIDQGEKRKL 640
Score = 237 (88.5 bits), Expect = 4.4e-37, Sum P(5) = 4.4e-37
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLG-DVRKFPFLEAPPAE 867
RTGPG+CYRLYS+EQ+ + +++ EI RVS+ + L ++ + LG D R FPF+E P +
Sbjct: 407 RTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSED 466
Query: 868 NIESSVRSLTQHGAIDSKE----RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ + L + S +T LG +S LPV++P+ KMLV+G + +++ ML +
Sbjct: 467 VLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTV 526
Query: 924 DLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQ 966
L+ + + L + PLG S+F +
Sbjct: 527 AAGLSVQSPFTNRSYRELEIVERRASLTSPLGDPFTLISIFRE 569
Score = 177 (67.4 bits), Expect = 7.8e-152, Sum P(5) = 7.8e-152
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 1190 SHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVL 1249
S K +++VI+A+GLYP +I D N +E H + K F +HP S
Sbjct: 710 SRKTAEVVRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHPNSSIAQY---- 765
Query: 1250 RISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSA 1309
+ +DP G + S HQ+ Y LLET+KP++ N + +PA+ TLL+ +
Sbjct: 766 ---HPETIDPRQG-----SDGFSRLHQIPFYGLLLETTKPYICNVMPVPAVYTLLV-AQK 816
Query: 1310 IHTNSDFTRLVFDSWIEV-FVPLQEAKSTA-DVNQLEHSLTRDLVQFMSSATHLAYSIRR 1367
I D+++L D ++E+ F + +S D ++ + LT+ L + +S RR
Sbjct: 817 IVIEDDWSQLSIDDFLELRFRSSTDCRSVLLDAKEIRYELTKGLAAKLVGEA--GFSGRR 874
Query: 1368 LLAADLKTMYRRTGAESGV 1386
LA + + ++ E G+
Sbjct: 875 RLAKYIDLL-NQSIVEKGI 892
Score = 166 (63.5 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ D+ L Y+V++LDE+HERHL D L+G+++ L ++K+ILMSATIN++LF Y
Sbjct: 174 QMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGY 233
Query: 1175 F 1175
F
Sbjct: 234 F 234
Score = 100 (40.3 bits), Expect = 7.8e-152, Sum P(5) = 7.8e-152
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ D+ L Y+++ILDEVHERHL D L+G++
Sbjct: 174 QMEKDSLLEKYNVIILDEVHERHLTSDLLIGLL 206
Score = 95 (38.5 bits), Expect = 2.6e-151, Sum P(5) = 2.6e-151
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
D L Y+V++LDE+HERHL D L+G+++ L
Sbjct: 178 DSLLEKYNVIILDEVHERHLTSDLLIGLLRDL 209
Score = 93 (37.8 bits), Expect = 4.2e-22, Sum P(5) = 4.2e-22
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSD 997
+T+LG +S LPV++P+ KMLV+G + +++ ML + L+ + + L
Sbjct: 491 LTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERR 550
Query: 998 LPVDIPLGKMLVFGSMFHQ 1016
+ PLG S+F +
Sbjct: 551 ASLTSPLGDPFTLISIFRE 569
Score = 93 (37.8 bits), Expect = 4.2e-22, Sum P(5) = 4.2e-22
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSD 1047
+T+LG +S LPV++P+ KMLV+G + +++ ML + L+ + + L
Sbjct: 491 LTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVERR 550
Query: 1048 LPVDIPLGKMLVFGSMFHQ 1066
+ PLG S+F +
Sbjct: 551 ASLTSPLGDPFTLISIFRE 569
Score = 92 (37.4 bits), Expect = 5.3e-22, Sum P(5) = 5.3e-22
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T+LG +S LPV++P+ KMLV+G + +++ ML + L+
Sbjct: 491 LTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLS 531
Score = 83 (34.3 bits), Expect = 7.8e-152, Sum P(5) = 7.8e-152
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVII 59
++P LY ++ L F Q +KF L K+R+ Q LP+A+ E +T ++ ++
Sbjct: 107 ITPWLYRHFEYAYHVALQFNQHQKFQKLQKLRKLQKELPIAERAGEF-ETTKSQKTKLL 164
Score = 75 (31.5 bits), Expect = 5.4e-151, Sum P(5) = 5.4e-151
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE + +KTK++F+TEGLLLRQ
Sbjct: 153 FETTKSQKTKLLFLTEGLLLRQ 174
Score = 45 (20.9 bits), Expect = 7.2e-12, Sum P(3) = 7.2e-12
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 211 DANEVEFRLKHDPKQVQVATDNFLSSYDILILDEVHERH 249
D E + + DP + V T FL S+ ++ + + H
Sbjct: 669 DKEEEDLEAEKDPLKADVKTVEFLLSHKQRDVENIRKTH 707
Score = 42 (19.8 bits), Expect = 7.8e-152, Sum P(5) = 7.8e-152
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 1099 DANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERH 1137
D E + + DP + V FL S+ ++ I + H
Sbjct: 669 DKEEEDLEAEKDPLKADVKTVEFLLSHKQRDVENIRKTH 707
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 680 (244.4 bits), Expect = 8.2e-129, Sum P(3) = 8.2e-129
Identities = 129/206 (62%), Positives = 159/206 (77%)
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF AP G+RKCI+STNIAETS+TIDGIRFVVDSGKVKEMSYD AK+ LQEFWIS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
AEQRKGRAGRTGPGVC+RLY+E Y A Y PEIRRV++DSL+L + M +GD R FP
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 459
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
F+E PP ++E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++
Sbjct: 460 FIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEP 519
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCET 677
VL++AA LSVQSPFT A P+C T
Sbjct: 520 VLTIAAALSVQSPFTRSAQSSPECCT 545
Score = 423 (154.0 bits), Expect = 8.2e-129, Sum P(3) = 8.2e-129
Identities = 80/132 (60%), Positives = 102/132 (77%)
Query: 8 EWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGK 67
E++ L YLDF QK+ F L K++ + +LP+AQY I+ T+ + +VV++AGDTGCGK
Sbjct: 132 EFRRALLHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGK 191
Query: 68 STQIPQYLVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTK 127
STQ+PQYL+ AGF +ACTQPRRIACISL+KRV +E+LSQY + VGYQIRFE R TK
Sbjct: 192 STQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATK 251
Query: 128 IVFITEGLLLRQ 139
IVF+T GLLLRQ
Sbjct: 252 IVFLTVGLLLRQ 263
Score = 326 (119.8 bits), Expect = 6.5e-90, Sum P(3) = 6.5e-90
Identities = 59/120 (49%), Positives = 84/120 (70%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RTGPGVC+RLY+E Y A Y PEIRRV++DSL+L + M +GD R FPF+E PP +
Sbjct: 409 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPAS 468
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+E+++ L GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 469 LETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 528
Score = 228 (85.3 bits), Expect = 8.2e-129, Sum P(3) = 8.2e-129
Identities = 42/77 (54%), Positives = 61/77 (79%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ + L Y+VL++DE+HERHLH DFLLGV++ LL + ++K+ILMSATINI LF +Y
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSY 322
Query: 370 FNRIAKIIKVPGRLYPI 386
F+ A +++VPGRL+PI
Sbjct: 323 FSN-APVVQVPGRLFPI 338
Score = 190 (71.9 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ + L Y+VL++DE+HERHLH DFLLGV++ LL + ++K+ILMSATINI LF +Y
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSY 322
Query: 1175 FN 1176
F+
Sbjct: 323 FS 324
Score = 124 (48.7 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 480 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 528
Score = 124 (48.7 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 480 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 528
Score = 124 (48.7 bits), Expect = 1.0e-68, Sum P(3) = 1.0e-68
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+DS E +T +G L+ LPVD+ +GKML+ GSMF ++ +L + AL+
Sbjct: 480 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALS 528
Score = 114 (45.2 bits), Expect = 8.2e-117, Sum P(3) = 8.2e-117
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y+VL++DE+HERHLH DFLLGV++ LL
Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLL 299
Score = 107 (42.7 bits), Expect = 4.5e-116, Sum P(3) = 4.5e-116
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ + L Y++LI+DEVHERHL+ DFLLGV+
Sbjct: 263 QIQREPSLPQYEVLIVDEVHERHLHNDFLLGVL 295
Score = 39 (18.8 bits), Expect = 7.6e-25, Sum P(2) = 7.6e-25
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLS--LVCMGLGDVRKF-PFLEAPPA-ENIES 603
+R SEE+ +++ PE RR+ D+ + G + +KF F E +N+++
Sbjct: 16 HRAPSEEEALEKWDWNCPETRRLLEDAFFREEDYIRQGSEECQKFWTFFERLQRFQNLKT 75
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLP 631
S + G K + +L +DLP
Sbjct: 76 SRKEEKDPG--QPKHSIPAL----ADLP 97
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 669 (240.6 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 152/441 (34%), Positives = 259/441 (58%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E +D+ L Y ++LDE HER +H D L GV+K E+ K+I+MSAT++++
Sbjct: 169 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVD 228
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI--IDKKYPR 422
LF YFNR A ++ + GR +PIQ+ Y TK + D + ++S+ I ++ P
Sbjct: 229 LFSQYFNR-APVLYLEGRQHPIQIFY--------TKQPQQDY-LHAALVSVFQIHQEAPA 278
Query: 423 TERGDVLIFMSGISEISSIVRA----AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
++ D+L+F++G EI ++ + A+ + +VLPL+++L +Q RVF AP+
Sbjct: 279 SQ--DILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPK 336
Query: 479 GLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
G RK I+STNIAETSITI GI++VVD+G VK Y+ + + L +SK A QR GR
Sbjct: 337 GYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 396
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P
Sbjct: 397 AGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSP 456
Query: 599 ENIESSVRSLTQHGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
++IE+++ L GA++ K+ +T +GR ++ P++ K ++ S FH + +L++
Sbjct: 457 DHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTI 516
Query: 656 AAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKR 715
++LSV S N R + ++ RK+ S+ GD +T+LN Y+ + K+ +K WCK
Sbjct: 517 VSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTF----KNIGGNKDWCKE 572
Query: 716 RGIEEQRFYEVTKLRSQFKQV 736
+ + V ++R+Q +++
Sbjct: 573 NFVNSKNMLLVAEVRAQLREI 593
Score = 228 (85.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 47/108 (43%), Positives = 71/108 (65%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRI 91
+ SLP+ + + +++ + ++ G+TG GK+TQIPQYL + G R IA TQPRR+
Sbjct: 62 RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRV 121
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A ISL+ RV+ E ++ LVGY +RFE E T+I F+T+G+LLR+
Sbjct: 122 AAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLRE 169
Score = 182 (69.1 bits), Expect = 2.2e-31, Sum P(4) = 2.2e-31
Identities = 36/127 (28%), Positives = 74/127 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P ++
Sbjct: 399 REDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDH 458
Query: 869 IESSVRSLTQHGAIDSKE---RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
IE+++ L GA++ K+ +T +GR ++ P++ K ++ S FH + +L +
Sbjct: 459 IEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVS 518
Query: 926 ALNFGAI 932
L+ ++
Sbjct: 519 LLSVDSV 525
Score = 145 (56.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R E + + + + D ++ A +D+ L Y ++LDE HER +H D L GV+K
Sbjct: 147 RFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQK 206
Query: 1153 STAEV-----KIILMSATINIELFHTYFNRIAKDLLSG 1185
E+ K+I+MSAT++++LF YFNR L G
Sbjct: 207 RRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEG 244
Score = 83 (34.3 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y ++LDE HER +H D L GV+K
Sbjct: 172 SDSLLRKYSCVILDEAHERTIHTDVLFGVVK 202
Score = 78 (32.5 bits), Expect = 4.4e-93, Sum P(4) = 4.4e-93
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D+ L Y +ILDE HER ++ D L GV+
Sbjct: 169 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 201
Score = 56 (24.8 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 923 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LDL GA++ K+ +T +GR ++ P++ K ++ S FH + +L + L+
Sbjct: 466 LDL---LGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV 522
Query: 980 GAI 982
++
Sbjct: 523 DSV 525
Score = 56 (24.8 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 973 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LDL GA++ K+ +T +GR ++ P++ K ++ S FH + +L + L+
Sbjct: 466 LDL---LGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV 522
Query: 1030 GAI 1032
++
Sbjct: 523 DSV 525
Score = 55 (24.4 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 1023 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
LDL GA++ K+ +T +GR ++ P++ K ++ S FH + +L +
Sbjct: 466 LDL---LGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTI 516
Score = 37 (18.1 bits), Expect = 1.3e-93, Sum P(4) = 1.3e-93
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFL 1291
P + K +VY SLL T+K ++
Sbjct: 645 PSSVLFHCKPACVVYTSLLYTNKCYM 670
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 657 (236.3 bits), Expect = 5.0e-93, Sum P(4) = 5.0e-93
Identities = 148/439 (33%), Positives = 250/439 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E +D L Y ++LDE HER LH D L GV+K E+ K+++MSAT++++
Sbjct: 185 EAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVD 244
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTE 424
LF YFN A ++ + GR +PIQ+ Y TK + D + ++S+
Sbjct: 245 LFSQYFNG-APVLYLEGRQHPIQIFY--------TKQPQHDY-LHAALVSVFQIHQEAPS 294
Query: 425 RGDVLIFMSGISEISSIVRA----AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
D+L+F++G EI ++ + A+ + +VLPL+++L +Q RVF AP+G
Sbjct: 295 SHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGY 354
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK I+STNIAETSITI GI++VVD+G VK Y+ + + L +SK A QR GRAG
Sbjct: 355 RKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAG 414
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 600
R G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P ++
Sbjct: 415 REDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDH 474
Query: 601 IESSVRSLTQHGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAA 657
I++++ L GA++ ++ +T +GR ++ P++ K ++ FH + +L++ A
Sbjct: 475 IQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVA 534
Query: 658 VLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRG 717
+LSV S N R + ++ RK+ S+ GD LT+LN Y+ + K+ +K+WCK
Sbjct: 535 LLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTF----KNTGGNKEWCKENF 590
Query: 718 IEEQRFYEVTKLRSQFKQV 736
+ + V ++R+Q + +
Sbjct: 591 VNSKNMMLVAEVRAQLRDI 609
Score = 229 (85.7 bits), Expect = 5.0e-93, Sum P(4) = 5.0e-93
Identities = 46/112 (41%), Positives = 73/112 (65%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQ 87
+ + + +LP+ Q + +++ + ++ G+TG GK+TQIPQYL + G R IA TQ
Sbjct: 74 VEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQ 133
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
PRR+A ISL+ RV+ E ++ LVGY +RF+ + TKI F+T+G+LLR+
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLRE 185
Score = 175 (66.7 bits), Expect = 2.5e-31, Sum P(4) = 2.5e-31
Identities = 34/127 (26%), Positives = 73/127 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P ++
Sbjct: 415 REDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDH 474
Query: 869 IESSVRSLTQHGAIDSKE---RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
I++++ L GA++ ++ +T +GR ++ P++ K ++ FH + +L +
Sbjct: 475 IQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVA 534
Query: 926 ALNFGAI 932
L+ +I
Sbjct: 535 LLSVDSI 541
Score = 136 (52.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + +++ + + D ++ A +D L Y ++LDE HER LH D L GV+K
Sbjct: 163 RFDDVTSDDTKIKFLTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQK 222
Query: 1153 STAEV-----KIILMSATINIELFHTYFN 1176
E+ K+++MSAT++++LF YFN
Sbjct: 223 RRKELGKLPLKVLVMSATMDVDLFSQYFN 251
Score = 86 (35.3 bits), Expect = 5.0e-93, Sum P(4) = 5.0e-93
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y ++LDE HER LH D L GV+K
Sbjct: 188 SDCLLRKYSCIILDEAHERTLHTDVLFGVVK 218
Score = 77 (32.2 bits), Expect = 4.4e-92, Sum P(4) = 4.4e-92
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D L Y +ILDE HER L+ D L GV+
Sbjct: 185 EAISDCLLRKYSCIILDEAHERTLHTDVLFGVV 217
Score = 50 (22.7 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 933 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
D + +T +GR ++ P++ K ++ FH + +L + L+ +I
Sbjct: 492 DGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSI 541
Score = 50 (22.7 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 11/50 (22%), Positives = 25/50 (50%)
Query: 983 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
D + +T +GR ++ P++ K ++ FH + +L + L+ +I
Sbjct: 492 DGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSI 541
Score = 47 (21.6 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 1033 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
D + +T +GR ++ P++ K ++ FH + +L +
Sbjct: 492 DGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTI 532
Score = 43 (20.2 bits), Expect = 5.7e-17, Sum P(4) = 5.7e-17
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV-----LDEIH---ERHL--HGDFL--LGVIKCLL 305
++SP HC EI+ LS +L DE+ ++ + GD L L V +
Sbjct: 518 LLSPKFHCTEEILTIVALLSVDSILYNPPSRRDEVQSVRKKFVSSEGDHLTLLNVYRTFK 577
Query: 306 HS--TVEVAADNFLSSYDVLVLDEI 328
++ E +NF++S +++++ E+
Sbjct: 578 NTGGNKEWCKENFVNSKNMMLVAEV 602
Score = 40 (19.1 bits), Expect = 5.0e-93, Sum P(4) = 5.0e-93
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 1240 SVFTS----QPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
S+FTS QPD + D P + P + K +VY LL TSK ++
Sbjct: 634 SLFTSTAELQPDGSYATTD--THQPVAIH-PSSVLFHCKPACVVYTELLFTSKCYM 686
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 651 (234.2 bits), Expect = 4.3e-92, Sum P(3) = 4.3e-92
Identities = 156/431 (36%), Positives = 251/431 (58%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E +D L+ YDV++LDE HER L D L G+IK +L ++K+I+MSAT+ F Y
Sbjct: 182 ESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKY 241
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A +IKVPGRL+P+++ Y D +S +R ++ID + GD+L
Sbjct: 242 FEN-APLIKVPGRLHPVEIFYTEEAAKDYLESA-------VR--TVIDI-HTNEGTGDIL 290
Query: 430 IFMSGISEIS-SIVRAAQEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
+F++G EI + + +E E+ + LPL+S+L + +Q ++F E RKCIVST
Sbjct: 291 VFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVST 348
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETS+TIDGI FVVD G K+ +Y+ +++ +L ISKASA QR GRAGRT PG C
Sbjct: 349 NIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKC 408
Query: 548 YRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVR 606
+RLY+E+ + L+ + + PEI R ++ S++L L+ +G+ D+ F F++ P + + ++
Sbjct: 409 FRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALE 468
Query: 607 SLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFT 666
L GA+D + ++T +G +S+ P+D L KML+ + + +L++AA+LS + F
Sbjct: 469 VLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFM 528
Query: 667 NRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEV 726
+ ++A+K + GD LT+LN Y + KK+ WC + + +
Sbjct: 529 RPKDNRIEADSAKKSFDHFDGDHLTMLNVYHSF---KKNG-EDPTWCYDNFLNHRAIKQA 584
Query: 727 TKLRSQFKQVL 737
+RSQ ++L
Sbjct: 585 DSVRSQLARIL 595
Score = 243 (90.6 bits), Expect = 4.3e-92, Sum P(3) = 4.3e-92
Identities = 53/124 (42%), Positives = 81/124 (65%)
Query: 21 QKEKFST-LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
+KE FS +I E + LPV + K++ I + + +VVI+ G+TG GK+TQIPQ++V AG
Sbjct: 59 KKETFSKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAG 118
Query: 80 FQR----IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
R + TQPRR+A IS++KRV+ E + VGY IRFE+ +T + ++T+G+
Sbjct: 119 LIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGM 178
Query: 136 LLRQ 139
LLR+
Sbjct: 179 LLRE 182
Score = 176 (67.0 bits), Expect = 1.5e-33, Sum P(4) = 1.5e-33
Identities = 35/102 (34%), Positives = 65/102 (63%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ + L+ + + PEI R ++ S++L L+ +G+ D+ F F++ P +
Sbjct: 402 RTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPD 461
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L GA+D + ++T +G +S+ P+D L KML+
Sbjct: 462 TLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLI 503
Score = 134 (52.2 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+D L+ YDV++LDE HER L D L G+IK +L ++K+I+MSAT+ F YF
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYF 242
Score = 89 (36.4 bits), Expect = 4.3e-92, Sum P(3) = 4.3e-92
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D L+ YDV++LDE HER L D L G+IK +L
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTDILFGLIKDIL 218
Score = 82 (33.9 bits), Expect = 2.3e-91, Sum P(3) = 2.3e-91
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+D L+ YD++ILDE HER L D L G+I
Sbjct: 185 SDPTLNKYDVIILDEAHERTLSTDILFGLI 214
Score = 76 (31.8 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 918 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
DT++ L++ GA+D + ++T +G +S+ P+D L KML+
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLI 503
Score = 76 (31.8 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 968 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
DT++ L++ GA+D + ++T +G +S+ P+D L KML+
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLI 503
Score = 76 (31.8 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 1018 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
DT++ L++ GA+D + ++T +G +S+ P+D L KML+
Sbjct: 461 DTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLI 503
Score = 43 (20.2 bits), Expect = 1.5e-33, Sum P(4) = 1.5e-33
Identities = 31/139 (22%), Positives = 54/139 (38%)
Query: 1111 PKQVQVAADNFLSSYDVLVLDEIHERHLHGDFLL-GVIKCLLHST-AEVKIILMSATINI 1168
PK ++ AD+ S+D D + +++ F G + + I + ++
Sbjct: 530 PKDNRIEADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRS 589
Query: 1169 ELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHC 1228
+L R L+SG I K I A+G + QVA ++ K F
Sbjct: 590 QLARI-LTRFKLPLVSGDVNSKFYYENIKKCI-AAGFFMQVAKCEK-------KNIYFTL 640
Query: 1229 KDKGFVSLHPFSVFTSQPD 1247
D+ V HP + T +P+
Sbjct: 641 GDEQSVIFHPSTGLTRRPE 659
Score = 42 (19.8 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 1297 MPALQTLLLFSSA-IHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFM 1355
+P ++TL L+SS I+ S +FD+ +E K N E SLT D + F+
Sbjct: 315 LPPMKTLPLYSSLPIYQQSK----IFDT-------CKERKCIVSTNIAETSLTIDGIVFV 363
Score = 39 (18.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 704 KDRVRSKKWCKRRGIEEQRFYEVTKLRSQ 732
K + +W ++ +R+YE+ + R +
Sbjct: 48 KSNLTIDQWIPKKETFSKRYYEILEKRKE 76
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 645 (232.1 bits), Expect = 9.3e-90, Sum P(3) = 9.3e-90
Identities = 153/414 (36%), Positives = 237/414 (57%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE---VKIILMSATINIELF 366
E D+ LS Y V++LDE HER L+ D L G++K + + +KII+MSAT++ ELF
Sbjct: 177 EAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELF 236
Query: 367 HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER- 425
YFN A ++ + GR +P+Q+ Y ++ D + + I I + DK + E
Sbjct: 237 SQYFNN-APVLYIEGRQFPVQIYYTEEIQKDYVDAALITV-LQIHIAHLTDKSINKEEEE 294
Query: 426 --GDVLIFMSGISEISSIVRAAQEYNEK----SQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
GD+L+F++G EI ++ + + + S+ IV P+ S L E+Q +VF AP+G
Sbjct: 295 DGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKG 354
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK I++TNIAETS+TI+GIR+VVDSG VK ++ + +L ISKASA+QR GRA
Sbjct: 355 SRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRA 414
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 599
GR G CYRLY++E + L S PEI+R +I +++L L +G+ D+ F FLE+PP
Sbjct: 415 GREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVA 474
Query: 600 NIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVL 659
++ S+ L AI +T LG+ ++ P+D K L+ F + VL + ++L
Sbjct: 475 SVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISIL 534
Query: 660 SVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWC 713
SV+S F + + E +K S GD +T LN ++E+ K + ++WC
Sbjct: 535 SVESIFFTPKEKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQ--QQQWC 586
Score = 233 (87.1 bits), Expect = 9.3e-90, Sum P(3) = 9.3e-90
Identities = 51/120 (42%), Positives = 77/120 (64%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACT 86
+I+ + SLPV K ++ + VII +TG GK+TQIPQYL + G++ IA T
Sbjct: 65 EIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAIT 124
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ---DSGL 143
QPRR+A +S+SKRV+ E + + VGY +RF+ EKTK+ ++T+G+L+R+ DS L
Sbjct: 125 QPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSL 184
Score = 170 (64.9 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 39/120 (32%), Positives = 66/120 (55%)
Query: 813 GVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 872
G CYRLY++E + L S PEI+R +I +++L L +G+ D+ F FLE+PP ++ S
Sbjct: 420 GKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKS 479
Query: 873 VRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 932
+ L AI +T LG+ ++ P+D K L+ F + +L++ L+ +I
Sbjct: 480 LELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESI 539
Score = 83 (34.3 bits), Expect = 9.3e-90, Sum P(3) = 9.3e-90
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
D LS Y V++LDE HER L+ D L G++K +
Sbjct: 181 DSSLSKYSVIILDEAHERTLNTDVLFGLLKSI 212
Score = 80 (33.2 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 211 DANEVEFRLKH--DPKQVQVAT-DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D + +LK+ D V+ A D+ LS Y ++ILDE HER L D L G++
Sbjct: 158 DKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLL 209
Score = 48 (22.0 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
L+L AI +T LG+ ++ P+D K L+ F + +L++ L+ +I
Sbjct: 480 LELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESI 539
Score = 48 (22.0 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
L+L AI +T LG+ ++ P+D K L+ F + +L++ L+ +I
Sbjct: 480 LELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESI 539
Score = 47 (21.6 bits), Expect = 3.8e-18, Sum P(4) = 3.8e-18
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L+L AI +T LG+ ++ P+D K L+ F + +L++
Sbjct: 480 LELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLII 530
Score = 40 (19.1 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 209 SMDANEVEFRLKHDPKQVQ-VATD 231
S+ +N+ +F LK P Q+Q ++ D
Sbjct: 21 SIHSNKGKFELKKKPVQLQQISND 44
Score = 38 (18.4 bits), Expect = 1.1e-30, Sum P(4) = 1.1e-30
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1328 FVPLQEAKSTADVNQLEHSLTRDLVQFMS 1356
F P ++ K DV ++ S D + F++
Sbjct: 541 FTPKEKKKEVEDVKKIFFSPDGDHITFLN 569
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 648 (233.2 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 154/467 (32%), Positives = 262/467 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E +D+ L Y ++LDE HER +H D L GV+K E+ K+I+MSAT++++
Sbjct: 178 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVD 237
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI--IDKKYPR 422
LF YFN A ++ + GR +PIQ+ Y TK + D + ++S+ I ++ P
Sbjct: 238 LFSQYFNG-APVLYLEGRQHPIQVFY--------TKQPQNDY-LHAALVSVFQIHQEAPS 287
Query: 423 TERGDVLIFMSGISEISSIVRA----AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
++ D+L+F++G EI ++ + A+ + +VLPL+++L +Q RVF AP+
Sbjct: 288 SQ--DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPK 345
Query: 479 GLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
G RK I+STNIAETSITI GI++VVD+G VK Y+ + + L +SK A QR GR
Sbjct: 346 GYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 405
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P
Sbjct: 406 AGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSP 465
Query: 599 ENIESSVRSLTQHGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
++I++++ L GA++ K+ +T +GR ++ P++ K ++ FH + +L++
Sbjct: 466 DHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTI 525
Query: 656 AAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKR 715
++LSV S N R + + RK+ S+ GD +T+LN Y+ + K+ +K WCK
Sbjct: 526 VSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTF----KNLGGNKDWCKE 581
Query: 716 RGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRH 762
+ + V ++R+Q + + + I + S R L H
Sbjct: 582 NFVNSKNMTLVAEVRAQLRDICLKMSM--PIASSRGDVESVRRCLAH 626
Score = 229 (85.7 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 47/108 (43%), Positives = 71/108 (65%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRI 91
+ SLP+ Q + +++ + ++ G+TG GK+TQIPQYL + G R IA TQPRR+
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRV 130
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A ISL+ RV+ E ++ LVGY +RF+ E T+I F+T+G+LLR+
Sbjct: 131 AAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLRE 178
Score = 174 (66.3 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 34/127 (26%), Positives = 73/127 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P ++
Sbjct: 408 REDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDH 467
Query: 869 IESSVRSLTQHGAIDSKE---RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
I++++ L GA++ K+ +T +GR ++ P++ K ++ FH + +L +
Sbjct: 468 IQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVS 527
Query: 926 ALNFGAI 932
L+ ++
Sbjct: 528 LLSVDSV 534
Score = 137 (53.3 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + + + + D ++ A +D+ L Y ++LDE HER +H D L GV+K
Sbjct: 156 RFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQK 215
Query: 1153 STAEV-----KIILMSATINIELFHTYFN 1176
E+ K+I+MSAT++++LF YFN
Sbjct: 216 RRKELGKLPLKVIVMSATMDVDLFSQYFN 244
Score = 83 (34.3 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y ++LDE HER +H D L GV+K
Sbjct: 181 SDSLLRKYSCVILDEAHERTIHTDVLFGVVK 211
Score = 78 (32.5 bits), Expect = 3.9e-89, Sum P(3) = 3.9e-89
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D+ L Y +ILDE HER ++ D L GV+
Sbjct: 178 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 210
Score = 52 (23.4 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 923 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L+
Sbjct: 475 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 531
Query: 980 GAI 982
++
Sbjct: 532 DSV 534
Score = 52 (23.4 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 973 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L+
Sbjct: 475 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 531
Query: 1030 GAI 1032
++
Sbjct: 532 DSV 534
Score = 52 (23.4 bits), Expect = 8.1e-19, Sum P(3) = 8.1e-19
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 1023 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLD--LAL 1077
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L++
Sbjct: 475 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 531
Query: 1078 NFVHHS 1083
+ V H+
Sbjct: 532 DSVLHN 537
Score = 40 (19.1 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVL 282
++SP HC EI+ LS VL
Sbjct: 511 LMSPKFHCTEEILTIVSLLSVDSVL 535
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 604 (217.7 bits), Expect = 3.2e-89, Sum P(4) = 3.2e-89
Identities = 157/445 (35%), Positives = 240/445 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 368
E ++ L Y V++LDE HER L+ D LLG++K L+ A K+++ SAT++ E
Sbjct: 108 ESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSE 167
Query: 369 YFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRI-LSIIDKKYPRTERGD 427
+F+ ++ VPG+LYP+++ Y K P YI L + + R GD
Sbjct: 168 FFSG-CPVLNVPGKLYPVEILY-----------SKERPVSYIESSLKVAIDIHVREPEGD 215
Query: 428 VLIFMSGISEISSIV-RAAQEYNEKSQGW----IVLPLHSTLSLEEQDRVFHYAPEGLRK 482
+LIFM+G +I +V R ++ ++G I+ PLH +L E Q RVF P R+
Sbjct: 216 ILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRR 275
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
IVSTNIAETS+T+DG+ +V+DSG VK+ Y+ ++ M +L ISK A QR GRAGRT
Sbjct: 276 FIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRT 335
Query: 543 GPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVR--KFPFLEAPPAE 599
PG CYRLY Y + + PEI+R S+ +L L + L D+ KF FL+AP +E
Sbjct: 336 RPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSE 395
Query: 600 NIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVL 659
++E +++ L AID +T +GR +SDLP++ L + L+ + + L++ A+L
Sbjct: 396 SLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAML 455
Query: 660 SVQSPFTNRAFRDPDCETARKELE-------SNHGDPLTVLNAYKEWLGVKKDRVRSKKW 712
S ++ T R E RK E S +GD + +L ++ W D V W
Sbjct: 456 SAET--TLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPV----W 509
Query: 713 CKRRGIEEQRFYEVTKLRSQFKQVL 737
CK G++ + V +R Q Q++
Sbjct: 510 CKENGMQVRGMVFVKDVRRQLCQIM 534
Score = 241 (89.9 bits), Expect = 3.2e-89, Sum P(4) = 3.2e-89
Identities = 49/106 (46%), Positives = 74/106 (69%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRIAC 93
+LP+ Q++++I++TV K VV+I G+TG GKSTQ+ Q L + G+ + IA TQPRR+A
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62
Query: 94 ISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+S+++RVA E VGY IRFE KT+I ++T+G+LLR+
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRE 108
Score = 172 (65.6 bits), Expect = 4.0e-33, Sum P(4) = 4.0e-33
Identities = 40/104 (38%), Positives = 61/104 (58%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVR--KFPFLEAPP 865
RT PG CYRLY Y + + PEI+R S+ +L L + L D+ KF FL+AP
Sbjct: 334 RTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPS 393
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+E++E +++ L AID +T +GR +SDLP++ L + L+
Sbjct: 394 SESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLI 437
Score = 91 (37.1 bits), Expect = 3.2e-89, Sum P(4) = 3.2e-89
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNF 316
L Y V++LDE HER L+ D LLG++K L V + A NF
Sbjct: 115 LDDYSVIILDEAHERSLNTDILLGLVKRL----VRIRASNF 151
Score = 77 (32.2 bits), Expect = 1.2e-64, Sum P(3) = 1.2e-64
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 211 DANEVEFRLKH--DPKQVQVATDN-FLSSYDILILDEVHERHLYGDFLLGVI 259
D + R+K+ D ++ + N L Y ++ILDE HER L D LLG++
Sbjct: 89 DRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLV 140
Score = 63 (27.2 bits), Expect = 5.6e-22, Sum P(4) = 5.6e-22
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
AID +T +GR +SDLP++ L + L+
Sbjct: 409 AIDENGAITRIGRTMSDLPLEPSLSRTLI 437
Score = 63 (27.2 bits), Expect = 5.6e-22, Sum P(4) = 5.6e-22
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
AID +T +GR +SDLP++ L + L+
Sbjct: 409 AIDENGAITRIGRTMSDLPLEPSLSRTLI 437
Score = 63 (27.2 bits), Expect = 5.6e-22, Sum P(4) = 5.6e-22
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
AID +T +GR +SDLP++ L + L+
Sbjct: 409 AIDENGAITRIGRTMSDLPLEPSLSRTLI 437
Score = 42 (19.8 bits), Expect = 3.2e-89, Sum P(4) = 3.2e-89
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1278 LVYMSLLETSKPFLVN 1293
+VY L+ T++PF+ N
Sbjct: 612 VVYHELISTTRPFMRN 627
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 640 (230.4 bits), Expect = 4.1e-89, Sum P(3) = 4.1e-89
Identities = 152/446 (34%), Positives = 255/446 (57%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E D L Y V++LDE HER +H D L GV+K E+ K+I+MSAT++++
Sbjct: 128 EAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVD 187
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR--ILSI--IDKKY 420
F YFN A ++ + GR +PIQ+ Y TK + D Y++ ++S+ I ++
Sbjct: 188 QFSQYFNG-APVLYLEGRQHPIQVFY--------TKQPQSD---YLQAALVSVFQIHQEA 235
Query: 421 PRTERGDVLIFMSGISEISSIVRAAQEYNEK-SQG---WIVLPLHSTLSLEEQDRVFHYA 476
P ++ D+L+F++G EI ++ + ++ + G V+PL+++L +Q RVF A
Sbjct: 236 PSSQ--DILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAA 293
Query: 477 PEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRK 536
P+G RK I+STNIAETSITI GI++VVD+G VK Y+ + L +SKA A QR
Sbjct: 294 PKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRT 353
Query: 537 GRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIR---RVSIDSLLLSLVCMGLGDVRKFPFL 593
GRAGR G+CYRLY+E+++ + + PEI+ R ++ S+LL L+ + + ++ F F+
Sbjct: 354 GRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFM 413
Query: 594 EAPPAENIESSVRSLTQHGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQID 650
P + I++++ L GA++ KE +T LGR ++ P++ K ++ FH +
Sbjct: 414 SKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTE 473
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+L++ ++LSV S N R + ++ RK+ S+ GD LT+LN Y+ + V + K
Sbjct: 474 EILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHLTLLNVYRAFKNVSGN----K 529
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQV 736
+WCK + + V+ +R+Q + +
Sbjct: 530 EWCKENFVNGRNMMLVSDVRAQLRDI 555
Score = 229 (85.7 bits), Expect = 4.1e-89, Sum P(3) = 4.1e-89
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRI 91
+ LP+ Q + ++ + ++ G+TG GK+TQIPQYL +AG R IA TQPRR+
Sbjct: 21 RRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRV 80
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
A ISL+ RV+ E ++ LVGY +RF+ ++T+I F+T+G+LLR+ G
Sbjct: 81 AAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIG 131
Score = 164 (62.8 bits), Expect = 7.7e-31, Sum P(3) = 7.7e-31
Identities = 35/130 (26%), Positives = 72/130 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIR---RVSIDSLLLSLVCMGLGDVRKFPFLEAPP 865
R G+CYRLY+E+++ + + PEI+ R ++ S+LL L+ + + ++ F F+ P
Sbjct: 358 REDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPS 417
Query: 866 AENIESSVRSLTQHGAIDSKER---VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
+ I++++ L GA++ KE +T LGR ++ P++ K ++ FH + +L
Sbjct: 418 PDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILT 477
Query: 923 LDLALNFGAI 932
+ L+ ++
Sbjct: 478 IVSLLSVDSV 487
Score = 138 (53.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + ++E + D ++ A D L Y V++LDE HER +H D L GV+K
Sbjct: 106 RFDDLTSDETRIKFLTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQK 165
Query: 1153 STAEV-----KIILMSATINIELFHTYFN 1176
E+ K+I+MSAT++++ F YFN
Sbjct: 166 KRKELGKLPLKVIVMSATMDVDQFSQYFN 194
Score = 86 (35.3 bits), Expect = 4.1e-89, Sum P(3) = 4.1e-89
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER +H D L GV+K
Sbjct: 132 DPILRKYSVVILDEAHERTIHTDVLFGVVK 161
Score = 78 (32.5 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 210 MDANEVEFRLKHDPKQVQVAT-DNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ ++E + D ++ A D L Y ++ILDE HER ++ D L GV+
Sbjct: 110 LTSDETRIKFLTDGMLLREAIGDPILRKYSVVILDEAHERTIHTDVLFGVV 160
Score = 58 (25.5 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 923 LDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LDL GA++ KE +T LGR ++ P++ K ++ FH + +L + L+
Sbjct: 428 LDL---LGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSV 484
Query: 980 GAI 982
++
Sbjct: 485 DSV 487
Score = 58 (25.5 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 973 LDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LDL GA++ KE +T LGR ++ P++ K ++ FH + +L + L+
Sbjct: 428 LDL---LGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSV 484
Query: 1030 GAI 1032
++
Sbjct: 485 DSV 487
Score = 57 (25.1 bits), Expect = 8.5e-20, Sum P(3) = 8.5e-20
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 1023 LDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
LDL GA++ KE +T LGR ++ P++ K ++ FH + +L +
Sbjct: 428 LDL---LGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTI 478
Score = 41 (19.5 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVL 282
++SP HC EI+ LS VL
Sbjct: 464 LLSPKFHCTEEILTIVSLLSVDSVL 488
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 593 (213.8 bits), Expect = 1.3e-87, Sum P(4) = 1.3e-87
Identities = 161/497 (32%), Positives = 259/497 (52%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERH 332
D LS Y V+++DE H+R +H D LL ++K + + + ++ +V + R
Sbjct: 150 DPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEK-TEFGNVASQVQTTTRD 208
Query: 333 LHGDFLLGVIKCLL-HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY- 390
+G GV+K + +K+I+MSA+++ +F YF AK + V GR +P+ + Y
Sbjct: 209 ANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGG-AKAVHVQGRQFPVDILYT 267
Query: 391 -HPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQE-- 447
HP +S+ +D + I I ++ P GD+L+F++G EI S+ R QE
Sbjct: 268 VHP-------ESDYVD-ATLVTIFQIHFEEKP----GDILVFLTGQDEIESVERLVQERL 315
Query: 448 YN--EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDS 505
N E + + L + S L E+Q +VF AP G RK I++TNIAETSITI GIR+V+D
Sbjct: 316 QNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDP 375
Query: 506 GKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTP 565
G VK SYD + M +L SKA QR GRAGR GPG +RLY E ++ L + + P
Sbjct: 376 GFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKP 435
Query: 566 EIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAI-DSKERVTSLG 624
EI+R ++ +++L L +G+ D+ F F++ P I ++ L GA+ D + +G
Sbjct: 436 EIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVG 495
Query: 625 RFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELES 684
+S LP++ K L+ + F+ ++ +L AVLSV+S F + + + T++ S
Sbjct: 496 YQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFAS 555
Query: 685 NHGDPLTVLNAYKE---WLGVKK--------DRVRSKKWCKRRGIEEQRFYEVTKLRSQF 733
GD LT L+ Y+E +L +K D++ KKWCK + + + Q
Sbjct: 556 VEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIM-KKWCKENYVNSRSLKHARDIYRQI 614
Query: 734 KQVLGDSGLITDIPGPD 750
++ + G G D
Sbjct: 615 REHVEQIGFNVSSCGND 631
Score = 259 (96.2 bits), Expect = 1.3e-87, Sum P(4) = 1.3e-87
Identities = 54/119 (45%), Positives = 78/119 (65%)
Query: 25 FSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-- 82
FS KI E + SLP+A ++ +++ V K ++II G+TG GK+TQ+PQ+L AGF R
Sbjct: 28 FSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREG 87
Query: 83 --IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I TQPRRIA ++++KRVA E Q VGY IRF+ T++ ++T+GLLLR+
Sbjct: 88 KMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLRE 146
Score = 167 (63.8 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 48/170 (28%), Positives = 87/170 (51%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R GPG +RLY E ++ L + + PEI+R ++ +++L L +G+ D+ F F++ P
Sbjct: 411 REGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGA 470
Query: 869 IESSVRSLTQHGAI-DSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
I ++ L GA+ D + +G +S LP++ K L+ + F+ ++ ML+ L
Sbjct: 471 IIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVL 530
Query: 928 NFGAI--DSKERV----TSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
+ +I D +E+ TS F S V+ G L + S++ + D L
Sbjct: 531 SVESIFYDPREKREEARTSKNHFAS---VE---GDHLTYLSVYRESDEFL 574
Score = 82 (33.9 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK 343
E D LS Y V+++DE H+R +H D LL ++K
Sbjct: 146 EALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLK 179
Score = 79 (32.9 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIK 1148
D LS Y V+++DE H+R +H D LL ++K
Sbjct: 150 DPHLSRYSVIIVDEAHDRSVHTDVLLALLK 179
Score = 69 (29.3 bits), Expect = 1.3e-87, Sum P(4) = 1.3e-87
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS Y ++I+DE H+R ++ D LL ++
Sbjct: 150 DPHLSRYSVIIVDEAHDRSVHTDVLLALL 178
Score = 54 (24.1 bits), Expect = 4.7e-22, Sum P(4) = 4.7e-22
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 928 NFGAI-DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DS 984
+ GA+ D + +G +S LP++ K L+ + F+ ++ ML+ L+ +I D
Sbjct: 480 SLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDP 539
Query: 985 KERV----TSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
+E+ TS F S V+ G L + S++ + D L
Sbjct: 540 REKREEARTSKNHFAS---VE---GDHLTYLSVYRESDEFL 574
Score = 54 (24.1 bits), Expect = 4.7e-22, Sum P(4) = 4.7e-22
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 978 NFGAI-DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DS 1034
+ GA+ D + +G +S LP++ K L+ + F+ ++ ML+ L+ +I D
Sbjct: 480 SLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDP 539
Query: 1035 KERV----TSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
+E+ TS F S V+ G L + S++ + D L
Sbjct: 540 REKREEARTSKNHFAS---VE---GDHLTYLSVYRESDEFL 574
Score = 50 (22.7 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 1136 RHLHGDFLLGVIKCLL-HSTAEVKIILMSATINIELFHTYF 1175
R +G GV+K + +K+I+MSA+++ +F YF
Sbjct: 207 RDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYF 247
Score = 48 (22.0 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 1028 NFGAI-DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 1072
+ GA+ D + +G +S LP++ K L+ + F+ ++ ML+
Sbjct: 480 SLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLI 525
Score = 42 (19.8 bits), Expect = 1.3e-87, Sum P(4) = 1.3e-87
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIH 1311
P + +K + +++ L++TSK ++ N + + +L L A H
Sbjct: 669 PTSVLFRAKPECVIFNELMQTSKKYIKN---LTIIDSLWLSELAPH 711
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 624 (224.7 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 157/456 (34%), Positives = 248/456 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS Y V+++DE HER L D LLG++K +L E++II+ SAT+ E F Y
Sbjct: 127 EALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRY 186
Query: 370 F--------------NRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI 415
F KII + GR+YP+ + L+ ++ + ++
Sbjct: 187 FAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLF-----LESAAENYVERS----VKTV 237
Query: 416 IDKKYPRTERGDVLIFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDR 471
D E GD+LIF++G EI + ++ E + KSQ + LPL++ L+ ++Q
Sbjct: 238 FDIHLQEGE-GDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMY 296
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF APE RK +VSTNIAE S+TI+GI +VVD G K +YD + + TL ISKA+
Sbjct: 297 VFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAA 356
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GRAGRT PG C+RLY++ Y L + + PEI+R ++ +++ L +G+ ++ +F
Sbjct: 357 AVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFD 416
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
FL +PPA+ + + L GAID ++T LG +++L VD + K+L+ F +
Sbjct: 417 FLTSPPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLS 476
Query: 651 TVLSLAAVLSVQSPFTNRAFRDP-DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS 709
+L++AA++S+Q + D E++R++ GD LT LN Y+ + V K + S
Sbjct: 477 EILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAF--VTKGKKES 534
Query: 710 KKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
K WC+ + + +R+Q K+ L G+ D
Sbjct: 535 K-WCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVD 569
Score = 230 (86.0 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 50/106 (47%), Positives = 69/106 (65%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACTQPRRIAC 93
LP+A++KQ I+ V V I+ G TG GK+TQ+PQYL QAG+ + IA TQPRR+A
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 94 ISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+++ RVA E + VGY IRFE T+I F+T+G+LLR+
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLRE 127
Score = 178 (67.7 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 39/126 (30%), Positives = 73/126 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG C+RLY++ Y L + + PEI+R ++ +++ L +G+ ++ +F FL +PPA+
Sbjct: 366 RTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADL 425
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ + L GAID ++T LG +++L VD + K+L+ F + +L + +
Sbjct: 426 VIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMV 485
Query: 928 NF-GAI 932
+ GA+
Sbjct: 486 SLQGAV 491
Score = 130 (50.8 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ D LS Y V+++DE HER L D LLG++K +L E++II+ SAT+ E F Y
Sbjct: 127 EALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRY 186
Query: 1175 F 1175
F
Sbjct: 187 F 187
Score = 87 (35.7 bits), Expect = 1.4e-87, Sum P(3) = 1.4e-87
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
D LS Y V+++DE HER L D LLG++K +L E+
Sbjct: 131 DPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPEL 169
Score = 81 (33.6 bits), Expect = 7.6e-32, Sum P(3) = 7.6e-32
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGE--IVAADYFLSSYDVL 282
+ D LS Y ++++DE HER L D LLG++ L E I+ + L + D L
Sbjct: 127 EALVDPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFL 184
Score = 44 (20.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1055 GKMLVFGSMFHQIDTMLLLDLALNFVHHS 1083
GK++ + +DT+ L A N+V S
Sbjct: 205 GKIISIEGRMYPVDTLFLESAAENYVERS 233
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 620 (223.3 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 147/458 (32%), Positives = 265/458 (57%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK-CLLHST----AEVKIILM 357
CLL E+ AD L+ Y +++LDE HER L+ D LLG++K LL + +K+++M
Sbjct: 118 CLLR---EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVM 174
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSII 416
SAT+ E +++ + +PGR YP++ + ++ + K + Y++ ++ +
Sbjct: 175 SATLETEKLSSFYGN-CPVFTIPGRTYPVKETFCNLIG-PKDKESSV----YVKEVVKMT 228
Query: 417 DKKYPRTERGDVLIFMSGISEISS----IVRAAQ--EY----NEKS-QGWIVLPLHSTLS 465
+ GD+L+F++G SEI + A+ +Y +++S G ++L L+ ++
Sbjct: 229 LDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMP 288
Query: 466 LEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEF 525
++Q ++F AP+G+RKC+V+TNIA TS+TIDGIR++VDSG VK+++++ + L+
Sbjct: 289 TDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVV 348
Query: 526 WISKASAEQRKGRAGRTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGL 584
ISK+ A+QR GRAGRT G C+R+YS++ + + + EY+ PEI+R S+ S++L+L C+G+
Sbjct: 349 PISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGV 408
Query: 585 GDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
DV +FP+L+ P I ++++ L Q+ AID + VT LGR + + P+ L + L+ +
Sbjct: 409 HDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAA 468
Query: 645 MFHQIDTVLSLAAVLSVQSPFTN--RAFRDPDCETARKELESNHG---DPLTVLNAYKEW 699
D +L +AA+LSV++ F + + + E KE+ + G D L +L +++
Sbjct: 469 ALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFEKC 528
Query: 700 LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+ WCK I + + +Q +++L
Sbjct: 529 RASENPSA----WCKENWIHWRAVKSAFSVETQLREIL 562
Score = 232 (86.7 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 49/121 (40%), Positives = 77/121 (63%)
Query: 26 STLMKIRETQN----SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ 81
ST + ET++ LP+ QYK +++ V + +I+ G+TG GK+TQ+PQYL +AG
Sbjct: 2 STKKRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS 61
Query: 82 R---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R I TQPRR+A I++++RV+ E + VGYQ+RF+ + T I ++T+G LLR
Sbjct: 62 RNGRIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLR 121
Query: 139 Q 139
+
Sbjct: 122 E 122
Score = 204 (76.9 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 42/114 (36%), Positives = 72/114 (63%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ + + + EY+ PEI+R S+ S++L+L C+G+ DV +FP+L+ P
Sbjct: 364 RTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHDVIRFPYLDCPEER 423
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
I ++++ L Q+ AID + VT LGR + + P+ L + L+ + D ML
Sbjct: 424 FILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIML 477
Score = 116 (45.9 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK-CLLHST----AEVKIILMSATINIE 1169
++ AD L+ Y +++LDE HER L+ D LLG++K LL + +K+++MSAT+ E
Sbjct: 122 EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETE 181
Query: 1170 LFHTYFNRIAKDLLSGST 1187
+++ + G T
Sbjct: 182 KLSSFYGNCPVFTIPGRT 199
Score = 87 (35.7 bits), Expect = 2.3e-87, Sum P(3) = 2.3e-87
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+ AD L+ Y +++LDE HER L+ D LLG++K
Sbjct: 123 ILADPSLTQYSIVILDEAHERSLNTDVLLGLLK 155
Score = 83 (34.3 bits), Expect = 6.1e-87, Sum P(3) = 6.1e-87
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
++ D L+ Y I+ILDE HER L D LLG++ L
Sbjct: 122 EILADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTL 158
Score = 54 (24.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 929 FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
+ AID + VT LGR + + P+ L + L+ + D ML
Sbjct: 435 YDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIML 477
Score = 54 (24.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 979 FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
+ AID + VT LGR + + P+ L + L+ + D ML
Sbjct: 435 YDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIML 477
Score = 54 (24.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 1029 FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
+ AID + VT LGR + + P+ L + L+ + D ML
Sbjct: 435 YDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKAAALGCEDIML 477
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 645 (232.1 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 147/441 (33%), Positives = 252/441 (57%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E +D+ L Y ++LDE HER +H D L GV+K E+ K+I+MSAT++++
Sbjct: 87 EAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRRRKELRKLPLKVIVMSATMDVD 146
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI--IDKKYPR 422
LF YFN A ++ + GR +PIQ+ Y TK + D + ++S+ I ++ P
Sbjct: 147 LFSQYFNG-ASVLYLEGRQHPIQVFY--------TKQPQQDY-LHAALVSVFQIHQEAPS 196
Query: 423 TERGDVLIFMSGISEISSIVRA----AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
++ D+L+F++G EI ++ + A+ + +VLPL+++L +Q RVF AP+
Sbjct: 197 SQ--DILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAPK 254
Query: 479 GLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
G RK I++TNIAETSITI GI++VVD+G VK Y+ + + L +SK A QR GR
Sbjct: 255 GCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGR 314
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G+CYRLY+E ++ + + PEI+R ++ S+LL L+ M + +V F F+ P
Sbjct: 315 AGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSKPSP 374
Query: 599 ENIESSVRSLTQHGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
++++++V L GA++ K+ +T +GR ++ P++ K ++ FH + +L++
Sbjct: 375 DHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTI 434
Query: 656 AAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKR 715
++LSV S N R + + RK+ S+ GD +T+LN Y+ + + D K WC+
Sbjct: 435 VSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSLGGD----KDWCRE 490
Query: 716 RGIEEQRFYEVTKLRSQFKQV 736
+ + ++R+Q + +
Sbjct: 491 NFVNSRNMMLAAEVRAQLRDI 511
Score = 210 (79.0 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 59 IAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQ 115
++G+TG GK+TQ+PQYL + G R IA TQPRR+A ISL+ RV+ E ++ LVGY
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYT 63
Query: 116 IRFEKHRREKTKIVFITEGLLLRQ 139
+RF+ E T+I F+T+G+LLR+
Sbjct: 64 VRFDDVSSEDTRIKFLTDGMLLRE 87
Score = 174 (66.3 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 35/127 (27%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+CYRLY+E ++ + + PEI+R ++ S+LL L+ M + +V F F+ P ++
Sbjct: 317 REDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFDFMSKPSPDH 376
Query: 869 IESSVRSLTQHGAIDSKER---VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
++++V L GA++ K+ +T +GR ++ P++ K ++ FH + +L +
Sbjct: 377 MQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVS 436
Query: 926 ALNFGAI 932
L+ ++
Sbjct: 437 LLSVDSV 443
Score = 140 (54.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + + + + D ++ A +D+ L Y ++LDE HER +H D L GV+K
Sbjct: 65 RFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQR 124
Query: 1153 STAEV-----KIILMSATINIELFHTYFNRIAKDLLSG 1185
E+ K+I+MSAT++++LF YFN + L G
Sbjct: 125 RRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEG 162
Score = 83 (34.3 bits), Expect = 2.4e-87, Sum P(3) = 2.4e-87
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y ++LDE HER +H D L GV+K
Sbjct: 90 SDSLLRKYSCIILDEAHERTVHTDVLFGVVK 120
Score = 78 (32.5 bits), Expect = 8.1e-87, Sum P(3) = 8.1e-87
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D+ L Y +ILDE HER ++ D L GV+
Sbjct: 87 EAISDSLLRKYSCIILDEAHERTVHTDVLFGVV 119
Score = 54 (24.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 915 HQIDTMLLLDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
H + LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L
Sbjct: 376 HMQAAVAQLDL---LGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEIL 432
Query: 972 LLDLALNFGAI 982
+ L+ ++
Sbjct: 433 TIVSLLSVDSV 443
Score = 54 (24.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 965 HQIDTMLLLDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
H + LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L
Sbjct: 376 HMQAAVAQLDL---LGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEIL 432
Query: 1022 LLDLALNFGAI 1032
+ L+ ++
Sbjct: 433 TIVSLLSVDSV 443
Score = 53 (23.7 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 1015 HQIDTMLLLDLALNFGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
H + LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L
Sbjct: 376 HMQAAVAQLDL---LGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEIL 432
Query: 1072 LL 1073
+
Sbjct: 433 TI 434
Score = 42 (19.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV-----LDEIH---ERHL--HGDF--LLGVIKCL- 304
++SP HC EI+ LS VL DE+ ++ L GD LL + +
Sbjct: 420 LLSPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFK 479
Query: 305 -LHSTVEVAADNFLSSYDVLVLDEI 328
L + +NF++S ++++ E+
Sbjct: 480 SLGGDKDWCRENFVNSRNMMLAAEV 504
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 635 (228.6 bits), Expect = 3.3e-87, Sum P(3) = 3.3e-87
Identities = 147/426 (34%), Positives = 241/426 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F + I
Sbjct: 182 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP-I 240
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 241 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 290
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 291 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 349
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K ++ M LQ + IS+A+A QR GRAGRTGPG C+RLY+
Sbjct: 350 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 409
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 410 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 469
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 470 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 529
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D LT LN Y +W K+ S WC I + +V ++R+
Sbjct: 530 EEESDQIREKFAVPESDHLTYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 585
Query: 732 QFKQVL 737
Q K ++
Sbjct: 586 QLKDIM 591
Score = 235 (87.8 bits), Expect = 3.3e-87, Sum P(3) = 3.3e-87
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 4 ALYEEWKLLLRT---YLDFKQKE-----KFSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
AL E+ K+ RT + D +K+ +F+ I E + LP+ +QE++ +
Sbjct: 29 ALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 88
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL + G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 89 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 148
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 149 GYAIRFEDCTSESTLIKYMTDGILLRE 175
Score = 194 (73.4 bits), Expect = 2.7e-32, Sum P(3) = 2.7e-32
Identities = 43/125 (34%), Positives = 75/125 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +
Sbjct: 398 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 457
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L
Sbjct: 458 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 517
Query: 928 NFGAI 932
+ AI
Sbjct: 518 SVPAI 522
Score = 111 (44.1 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F +
Sbjct: 182 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIF 241
Query: 1182 LLSGST 1187
+ G T
Sbjct: 242 HIPGRT 247
Score = 69 (29.3 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 470 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 522
Score = 69 (29.3 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 470 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 522
Score = 67 (28.6 bits), Expect = 3.3e-87, Sum P(3) = 3.3e-87
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 182 LDHYSAIIMDEAHERSLNTDVLFGLLR 208
Score = 67 (28.6 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 470 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 499
Score = 63 (27.2 bits), Expect = 8.8e-87, Sum P(3) = 8.8e-87
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 182 LDHYSAIIMDEAHERSLNTDVLFGLL 207
Score = 47 (21.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+KK S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 48 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 90
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 605 (218.0 bits), Expect = 5.0e-87, Sum P(4) = 5.0e-87
Identities = 162/516 (31%), Positives = 275/516 (53%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D +LSS +VLDEIHER+L D L+ V+K LL+ ++ ++ + E
Sbjct: 235 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 294
Query: 332 ----HLHGDFLLGVIKCLLHSTAE-VKIILMSATINIEL----FHTYFNRIAK-----II 377
H+ G F V++ LL E ++ + + + NR K I
Sbjct: 295 CPMIHIPG-FTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIY 353
Query: 378 KV--PGRLYPIQLEYHP-IVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K P + ++ Y V+ ++ + +K+D + ++ I + E G +L+F+
Sbjct: 354 KERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLE---EEDGAILVFLP 410
Query: 434 GISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
G IS++ + KS ++++PLHS + Q +VF P G+RK +++TNIAET
Sbjct: 411 GWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAET 470
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
SITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 471 SITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN 530
Query: 553 EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQ 610
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S+R L +
Sbjct: 531 GLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLME 590
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF
Sbjct: 591 LNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG 650
Query: 671 RDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTK 728
++ + RKEL + D LTV+NA++ W ++ R +K +C + +
Sbjct: 651 KEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHN 710
Query: 729 LRSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
++ QF + L +G ++ P P+++++S E+ ++
Sbjct: 711 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIK 746
Score = 206 (77.6 bits), Expect = 9.9e-34, Sum P(4) = 9.9e-34
Identities = 45/123 (36%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 519 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN 578
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S+R L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 579 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 638
Query: 927 LNF 929
L+F
Sbjct: 639 LSF 641
Score = 192 (72.6 bits), Expect = 5.0e-87, Sum P(4) = 5.0e-87
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 101 DLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD 160
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYS--NLVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 161 NYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGS 220
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 221 ILYCTTGIILQ 231
Score = 154 (59.3 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D +LSS +VLDEIHER+L D L+ V+K LL+ +++K+ILMSAT+N E F YF
Sbjct: 235 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 294
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 295 CPMIHIPGFT 304
Score = 104 (41.7 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 589 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 641
Score = 104 (41.7 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 589 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 641
Score = 104 (41.7 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 589 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 641
Score = 82 (33.9 bits), Expect = 5.0e-87, Sum P(4) = 5.0e-87
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
+R KD S + + K I+K ++ +GLYP+VA N + K + K G V+
Sbjct: 727 SRNPKDPESNINSDNEK---IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGLVA 782
Query: 1236 LHPFSVFTSQPD 1247
+HP SV Q D
Sbjct: 783 VHPKSVNVEQTD 794
Score = 78 (32.5 bits), Expect = 5.0e-87, Sum P(4) = 5.0e-87
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D +LSS ++LDE+HER+L D L+ V+ L+
Sbjct: 235 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 269
Score = 49 (22.3 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ K FL+ L MP + +F T ++V
Sbjct: 409 LPGWDNISTLHDLLMSQVMFKSDK-FLIIPLHSLMPTVNQTQVFK---RTPPGVRKIVIA 464
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 465 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 502
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 610 (219.8 bits), Expect = 2.0e-86, Sum P(4) = 2.0e-86
Identities = 158/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ A++K+I+MSAT++ F Y
Sbjct: 211 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIY 270
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 271 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 320
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 321 LFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 380
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 381 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 440
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 441 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 500
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 501 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 560
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 561 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 616
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 617 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 663
Score = 215 (80.7 bits), Expect = 2.0e-86, Sum P(4) = 2.0e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK+ D +++ + ++ G+TG GK+TQIPQ+ V G +R +ACTQPRR+
Sbjct: 104 LPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRV 163
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 164 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 211
Score = 163 (62.4 bits), Expect = 2.3e-28, Sum P(4) = 2.3e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 442 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 501
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 502 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 543
Score = 135 (52.6 bits), Expect = 7.2e-22, Sum P(3) = 7.2e-22
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ A++K+I+MSAT++ F YF+
Sbjct: 215 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNC 274
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 275 PLLTIPGRT 283
Score = 80 (33.2 bits), Expect = 2.0e-86, Sum P(4) = 2.0e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 215 DPLLERYGVIILDEAHERTLATDILMGVLK 244
Score = 78 (32.5 bits), Expect = 3.3e-86, Sum P(4) = 3.3e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 211 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 243
Score = 70 (29.7 bits), Expect = 6.6e-19, Sum P(4) = 6.6e-19
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 504 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 562
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 563 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 622
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 623 SADNVRQQ 630
Score = 57 (25.1 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 504 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 543
Score = 57 (25.1 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 504 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 543
Score = 46 (21.3 bits), Expect = 2.0e-86, Sum P(4) = 2.0e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 644 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 696
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 697 KPEWVLYNE 705
Score = 46 (21.3 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 578 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 630
Score = 40 (19.1 bits), Expect = 7.6e-62, Sum P(3) = 7.6e-62
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 165 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 224
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 225 ILDE--AHERTLATDILMGV-LKEVVRQRADLKVIVMSATL 262
Score = 40 (19.1 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 602 KQNHESVQWCYDNFINYRSLMSADNVRQQ 630
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 637 (229.3 bits), Expect = 4.7e-86, Sum P(3) = 4.7e-86
Identities = 167/457 (36%), Positives = 246/457 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ LS Y ++LDE HER L D L+G++K ++ ++KII+MSAT++ E F Y
Sbjct: 199 EAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRY 258
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRTERGDV 428
FN A ++ VPGR YP++L Y P E R + LD IR +L I + E GD+
Sbjct: 259 FND-APLLAVPGRTYPVELYYTP--EFQR---DYLDSA--IRTVLQI----HATEEAGDI 306
Query: 429 LIFMSGISEISSIVRAA-----QEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGL-- 480
L+F++G EI VR Q E+ G + V PL+ +L +Q R+F APE
Sbjct: 307 LLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNG 366
Query: 481 ---RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKG 537
RK ++STNIAETS+TIDGI +VVD G K+ Y+ ++ +L ISKASA+QR G
Sbjct: 367 RPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426
Query: 538 RAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAP 596
RAGRT PG C+RLY+EE + L E S PEI R ++ S +L L +G+ D+ F F++ P
Sbjct: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 486
Query: 597 PAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLA 656
E + ++ L +D + +T LGR S P+D L ML+ F +L++
Sbjct: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546
Query: 657 AVLSVQSPFTNRAFRDPD-CETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKR 715
A+LSV + F R +D + A+ GD +T+LN Y + + KWC+
Sbjct: 547 AMLSVPNVFI-RPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRD 605
Query: 716 RGIEEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGP 749
+ + +RSQ ++++ L TD P
Sbjct: 606 HYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESP 642
Score = 210 (79.0 bits), Expect = 4.7e-86, Sum P(3) = 4.7e-86
Identities = 45/121 (37%), Positives = 73/121 (60%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV-----QA 78
K+ ++KIR LPV + E + ++++ G+TG GK+TQIPQ+++
Sbjct: 82 KYVDILKIRR---ELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHL 138
Query: 79 GFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
++ACTQPRR+A +S+++RVA E + VGY IRFE KT + ++T+G+LLR
Sbjct: 139 ENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLR 198
Query: 139 Q 139
+
Sbjct: 199 E 199
Score = 181 (68.8 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+EE + L E S PEI R ++ S +L L +G+ D+ F F++ P E
Sbjct: 430 RTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPE 489
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L +D + +T LGR S P+D L ML+ GS Q +L +A+
Sbjct: 490 TMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLI-GSFEFQCSQEILTIVAM 548
Score = 145 (56.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVAA-DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R E+ +N+ + D ++ A D+ LS Y ++LDE HER L D L+G++K ++
Sbjct: 177 RFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVK 236
Query: 1153 STAEVKIILMSATINIELFHTYFN 1176
++KII+MSAT++ E F YFN
Sbjct: 237 RRPDLKIIIMSATLDAEKFQRYFN 260
Score = 79 (32.9 bits), Expect = 4.7e-86, Sum P(3) = 4.7e-86
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D+ LS Y ++LDE HER L D L+G++K
Sbjct: 203 DHDLSRYSCIILDEAHERTLATDILMGLLK 232
Score = 67 (28.6 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 918 DTMLLLDLALNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+TM+ LN+ A +D + +T LGR S P+D L ML+ GS Q +L +A
Sbjct: 489 ETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLI-GSFEFQCSQEILTIVA 547
Query: 977 L 977
+
Sbjct: 548 M 548
Score = 67 (28.6 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 968 DTMLLLDLALNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+TM+ LN+ A +D + +T LGR S P+D L ML+ GS Q +L +A
Sbjct: 489 ETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLI-GSFEFQCSQEILTIVA 547
Query: 1027 L 1027
+
Sbjct: 548 M 548
Score = 67 (28.6 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1018 DTMLLLDLALNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+TM+ LN+ A +D + +T LGR S P+D L ML+ GS Q +L +A
Sbjct: 489 ETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLI-GSFEFQCSQEILTIVA 547
Query: 1077 L 1077
+
Sbjct: 548 M 548
Score = 45 (20.9 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 830 YSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHG 880
Y TPE +R +DS + +++ + + L + IE +VR ++ G
Sbjct: 277 YYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEG 327
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 607 (218.7 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I E GD+L
Sbjct: 304 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEEEGDLL 353
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAI 413
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 414 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 473
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 474 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 533
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ ++ + VLS+ A+
Sbjct: 534 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAM 593
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K S +WC I
Sbjct: 594 LSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 649
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L TD D ++ R +AL G
Sbjct: 650 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR-KALVTG 696
Score = 214 (80.4 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 46/108 (42%), Positives = 70/108 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-----AGFQR-IACTQPRRI 91
LPV +YK D +++ + ++ G+TG GK+TQIPQ+ V+ G +R +ACTQPRR+
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 92 ACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(4) = 3.8e-28
Identities = 34/102 (33%), Positives = 60/102 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 475 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 534
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L A++ +T LG +++ P+D L KM++
Sbjct: 535 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 132 (51.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNC 307
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 308 PLLTIPGRT 316
Score = 80 (33.2 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 248 DPLLERYGVIILDEAHERTLATDILMGVLK 277
Score = 78 (32.5 bits), Expect = 8.8e-86, Sum P(4) = 8.8e-86
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 276
Score = 70 (29.7 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ ++ + +L + L+
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLS 595
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 596 VPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 655
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 656 SADNVRQQ 663
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 57 (25.1 bits), Expect = 2.2e-17, Sum P(4) = 2.2e-17
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ A++ +T LG +++ P+D L KM++
Sbjct: 537 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 46 (21.3 bits), Expect = 5.4e-86, Sum P(4) = 5.4e-86
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 677 STDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 729
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 730 KPEWVLYNE 738
Score = 46 (21.3 bits), Expect = 4.6e-16, Sum P(4) = 4.6e-16
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 285 DEIHER--HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
DE R H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 611 DEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 663
Score = 41 (19.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 198 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 257
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 258 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 295
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 635 KQNHESVQWCYDNFINYRSLMSADNVRQQ 663
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 608 (219.1 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 157/468 (33%), Positives = 249/468 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F Y
Sbjct: 218 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVY 277
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ ++ +PGR +P+++ Y P E D ++ I ++I + GDVL
Sbjct: 278 FDN-CPLLTIPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEDEGDVL 327
Query: 430 IFMSGISEISSIV-RAAQEYNEKSQ--GWI-VLPLHSTLSLEEQDRVFH----YAPEGL- 480
+F++G EI R +E ++ G I ++PL+STL ++Q R+F P G
Sbjct: 328 LFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAI 387
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 388 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRA 447
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P
Sbjct: 448 GRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAP 507
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A++ +T LG +++ P+D L KM++ F+ + VLS+ A+
Sbjct: 508 ETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAM 567
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + ++ GD LT+LN Y + K S +WC I
Sbjct: 568 LSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAF----KQNHESVQWCYDNFI 623
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+ +R Q +++ L T+ D ++ R RAL G
Sbjct: 624 NYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIR-RALVTG 670
Score = 209 (78.6 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA-----GFQR-I 83
+I + + LPV +YK+ D + + + ++ G+TG GK+TQIPQ+ V G +R +
Sbjct: 103 EILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGV 162
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
ACTQPRR+A +S+++RVA E VGY IRFE KT + ++T+G+LLR+
Sbjct: 163 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 218
Score = 166 (63.5 bits), Expect = 4.2e-28, Sum P(4) = 4.2e-28
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ Y + +T PEI R ++ S++L L +G+ D+ F F++ P E
Sbjct: 449 RTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE 508
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L A++ +T LG +++ P+D L KM++ F+ + +L + L
Sbjct: 509 TLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAML 568
Query: 928 N 928
+
Sbjct: 569 S 569
Score = 133 (51.9 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V++LDE HER L D L+GV+K ++ +++K+I+MSAT++ F YF+
Sbjct: 222 DPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNC 281
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 282 PLLTIPGRT 290
Score = 80 (33.2 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER L D L+GV+K
Sbjct: 222 DPLLERYGVIILDEAHERTLATDILMGVLK 251
Score = 78 (32.5 bits), Expect = 1.8e-85, Sum P(4) = 1.8e-85
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++ILDE HER L D L+GV+
Sbjct: 218 EAMNDPLLERYGVIILDEAHERTLATDILMGVL 250
Score = 73 (30.8 bits), Expect = 1.2e-18, Sum P(4) = 1.2e-18
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
M L+L LN+ A++ +T LG +++ P+D L KM++ F+ + +L + L+
Sbjct: 511 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLS 569
Query: 1079 ----FVHHSXXXXXXXAGE-RLESMDANE-----VEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV + + R +D + V K + + VQ DNF++ ++
Sbjct: 570 VPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLM 629
Query: 1129 VLDEIHER 1136
D + ++
Sbjct: 630 SADNVRQQ 637
Score = 60 (26.2 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
M L+L LN+ A++ +T LG +++ P+D L KM++ F+ + +L + L+
Sbjct: 511 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLS 569
Score = 60 (26.2 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
M L+L LN+ A++ +T LG +++ P+D L KM++ F+ + +L + L+
Sbjct: 511 MRALEL-LNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLS 569
Score = 47 (21.6 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + +D I ++ L +G + QVA + TVK D V LHP +V
Sbjct: 651 STEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVK-------DNQVVQLHPSTVLDH 703
Query: 1245 QPDVLRISE 1253
+P+ + +E
Sbjct: 704 KPEWVLYNE 712
Score = 45 (20.9 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 291 HLHGDFL--LGVIKCLL--HSTVEVAADNFLSSYDVLVLDEIHER 331
H+ GD L L V H +V+ DNF++ ++ D + ++
Sbjct: 593 HIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQ 637
Score = 41 (19.5 bits), Expect = 7.7e-62, Sum P(3) = 7.7e-62
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP--RRIACI 94
++ VAQ + +D +L + V C + I +Y+ R A P R I
Sbjct: 172 AMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVI 231
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
L + A+E L+G ++ +R K++ ++ L
Sbjct: 232 ILDE--AHERTLATDILMGV-LKEVVRQRSDLKVIVMSATL 269
Score = 40 (19.1 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 220 KHDPKQVQVATDNFLSSYDILILDEVHER 248
K + + VQ DNF++ ++ D V ++
Sbjct: 609 KQNHESVQWCYDNFINYRSLMSADNVRQQ 637
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 613 (220.8 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 157/484 (32%), Positives = 260/484 (53%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHST------AEVKIIL 356
CLL + AD LS Y +++LDE HER L D L G++K L E+K+++
Sbjct: 101 CLLR---HILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVV 157
Query: 357 MSATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSII 416
MSAT+ ++ +F + ++ +PGR YP++ + ++ T S +++ I
Sbjct: 158 MSATLEVDKLSEFFGHCS-VLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEA-VKVTLDI 215
Query: 417 DKKYPRTERGDVLIFMSGISEISS----IVRAAQ------EYNEKS-QGWIVLPLHSTLS 465
P GD+L+F++G EI + + A+ E +++S +G ++LPL+ ++S
Sbjct: 216 HLNEPE---GDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMS 272
Query: 466 LEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEF 525
++Q R+F AP+G+RKC+VSTNIA TS+TI+G+R+VVDSG VK+++++ + L+
Sbjct: 273 TDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVV 332
Query: 526 WISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGL 584
ISK+ A QR GRAGRT G YRLYS E + + +++ PEI+R S+ S++L+L C+ +
Sbjct: 333 PISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSV 392
Query: 585 GDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKER--VTSLGRFLSDLPVDIPLGKMLVF 642
DV +FP+L+ P +I +++ L Q AID R VT LG FL P+ L ++
Sbjct: 393 HDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVIK 452
Query: 643 GSMFHQIDTVLSLAAVLSVQSPFTNRAF--RDPDCETARKELESNHG---DPLTVLNAYK 697
+ D +L +AA+LSV++ F + + E +EL S G D T+LN ++
Sbjct: 453 AASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLLNIFE 512
Query: 698 EWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
+ K WC + I + + Q +++ + D P + SR
Sbjct: 513 QCKASKSPSA----WCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFP-KETFEGSRT 567
Query: 758 RALR 761
LR
Sbjct: 568 ELLR 571
Score = 221 (82.9 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 44/104 (42%), Positives = 71/104 (68%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRIACI 94
LP+ ++++ ++ V + +I+ G+TG GKSTQ+P+YL +AG + I TQPRR+A I
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
S+++RVA E ++VGYQ+RF+ E+T I ++T+G LLR
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLR 104
Score = 174 (66.3 bits), Expect = 4.4e-31, Sum P(3) = 4.4e-31
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G YRLYS E + + +++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 348 RTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVHDVIRFPYLDRPEER 407
Query: 868 NIESSVRSLTQHGAIDSKER--VTTLGRFLSDLPV 900
+I +++ L Q AID R VT LG FL P+
Sbjct: 408 HILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPL 442
Score = 119 (46.9 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 39/139 (28%), Positives = 65/139 (46%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQ-VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + E + D ++ + AD LS Y +++LDE HER L D L G++K L
Sbjct: 83 RFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFL 142
Query: 1153 ST------AEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLY 1206
E+K+++MSAT+ ++ +F + + G RS+ +K I + L
Sbjct: 143 QNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPG---RSYP----VKEIFCNLLS 195
Query: 1207 PQVAIGDEFNTSETVKEAL 1225
P+ G +E VK L
Sbjct: 196 PRDT-GSSAYVTEAVKVTL 213
Score = 89 (36.4 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ AD LS Y +++LDE HER L D L G++K L
Sbjct: 106 ILADPLLSKYSIIILDEAHERSLSTDILFGLLKKL 140
Score = 82 (33.9 bits), Expect = 6.4e-85, Sum P(3) = 6.4e-85
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D LS Y I+ILDE HER L D L G++
Sbjct: 106 ILADPLLSKYSIIILDEAHERSLSTDILFGLL 137
Score = 40 (19.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 931 AIDSKER--VTSLGRFLSDLPV 950
AID R VT LG FL P+
Sbjct: 421 AIDRTRRGHVTRLGEFLVQFPL 442
Score = 40 (19.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 981 AIDSKER--VTSLGRFLSDLPV 1000
AID R VT LG FL P+
Sbjct: 421 AIDRTRRGHVTRLGEFLVQFPL 442
Score = 40 (19.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 1031 AIDSKER--VTSLGRFLSDLPV 1050
AID R VT LG FL P+
Sbjct: 421 AIDRTRRGHVTRLGEFLVQFPL 442
Score = 39 (18.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKE 54
KE F L+ R+T +S V + + +D L E
Sbjct: 187 KEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNE 219
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 588 (212.0 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 151/449 (33%), Positives = 240/449 (53%)
Query: 304 LLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINI 363
LL T+ D ++ Y +++DE HER L D L+ ++K L +++KII+MSAT++
Sbjct: 210 LLRETIH---DPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDA 266
Query: 364 ELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPR 422
F YF A I+ VPGR +P+++ Y E D ++ +R +L I +
Sbjct: 267 AKFQRYFFE-APILAVPGRTHPVEIFYTAEAERDYIEAS-------VRTVLQI----HAT 314
Query: 423 TERGDVLIFMSGISEISSIVRAAQ-EYNEKSQ----GWI-VLPLHSTLSLEEQDRVFHYA 476
GD+L+F++G EI + R + E +E + G + V PL+ TL ++Q ++F+ A
Sbjct: 315 EAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAA 374
Query: 477 PEGL-------RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISK 529
P L RKCIV+TNIAETS+TIDGI +VVD G K+ Y+ ++ +L IS+
Sbjct: 375 PPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISR 434
Query: 530 ASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVR 588
ASA+QR GRAGRT PG C+RLY+E + L E + PEI R ++ + +L L +G+ D+
Sbjct: 435 ASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLV 494
Query: 589 KFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQ 648
F F++ P E + ++ L ++ +T LG S+ P+D L MLV F+
Sbjct: 495 HFDFMDPPAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYC 554
Query: 649 IDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR 708
+ +LS+ ++LSV F A + ++ + GD LT+LNAY +
Sbjct: 555 SNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTD 614
Query: 709 SKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
KKWC + + +R+Q K ++
Sbjct: 615 MKKWCHEHFLSYRHLSSADNVRAQLKGIM 643
Score = 236 (88.1 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 48/115 (41%), Positives = 75/115 (65%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV-----QAGFQRIA 84
KI +T+ +LPV Q++QE +D K ++++ G+TG GK+TQIPQY++ + +A
Sbjct: 99 KILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVA 158
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S+++RVA E + VGY IRFE T + ++T+G LLR+
Sbjct: 159 CTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRE 213
Score = 158 (60.7 bits), Expect = 2.2e-29, Sum P(4) = 2.2e-29
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E + L E + PEI R ++ + +L L +G+ D+ F F++ P E
Sbjct: 446 RTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPE 505
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
+ ++ L ++ +T LG S+ P+D L MLV F+ + ML
Sbjct: 506 TMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEML 559
Score = 110 (43.8 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D ++ Y +++DE HER L D L+ ++K L +++KII+MSAT++ F YF
Sbjct: 217 DPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYF 273
Score = 62 (26.9 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
++ Y +++DE HER L D L+ ++K L
Sbjct: 220 MTRYSCIIIDEAHERTLATDILMALLKQL 248
Score = 59 (25.8 bits), Expect = 3.5e-85, Sum P(4) = 3.5e-85
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D ++ Y +I+DE HER L D L+ ++
Sbjct: 217 DPNMTRYSCIIIDEAHERTLATDILMALL 245
Score = 57 (25.1 bits), Expect = 1.7e-85, Sum P(4) = 1.7e-85
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 1180 KDLLSGSTARSHKDV-TILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHP 1238
+DL ST + K+ T ++ L +G + QVA+ + TS V + KD V LHP
Sbjct: 646 QDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRE---TSGKVYHTI---KDNQNVMLHP 699
Query: 1239 FSVFTS 1244
SV T+
Sbjct: 700 SSVLTT 705
Score = 57 (25.1 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
+TM+ LN+ ++ +T LG S+ P+D L MLV F+ + ML
Sbjct: 505 ETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEML 559
Score = 57 (25.1 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
+TM+ LN+ ++ +T LG S+ P+D L MLV F+ + ML
Sbjct: 505 ETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEML 559
Score = 57 (25.1 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
+TM+ LN+ ++ +T LG S+ P+D L MLV F+ + ML
Sbjct: 505 ETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEML 559
Score = 45 (20.9 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV--------LDEI--HERHLHGDFL 297
V SP +C E+++ LS V + DE+ H +H+ GD L
Sbjct: 547 VSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHL 596
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 639 (230.0 bits), Expect = 1.8e-85, Sum P(3) = 1.8e-85
Identities = 154/435 (35%), Positives = 243/435 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ + L+SY V+++DE HER L D L G++K + ++K+++ SAT++ E F Y
Sbjct: 508 ELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDY 567
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A I PGR YP+++ Y E D +D + IL+I + R GD+L
Sbjct: 568 FDT-APIFSFPGRRYPVEINYTSAPEADY-----MDAA-IVTILTI----HVREPLGDIL 616
Query: 430 IFMSGISEISS---IVR-AAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F +G EI + I++ + K + I+ P+++ L E Q ++F PEG RK ++
Sbjct: 617 VFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVL 676
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TIDGI++VVD G K SY+ M +L ISKASA QR GRAGRT PG
Sbjct: 677 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPG 736
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
CYRLY+ Y+ L E + PE++R ++ S++L+L +G+ D+ F F++ PPAE + S
Sbjct: 737 KCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKS 796
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQ-S 663
+ L GA++ +T GR +++ P+D L KM+V + D ++S+AA+LS+ S
Sbjct: 797 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGS 856
Query: 664 PFTNRAFRDPDCETARKELES-NHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
F + + AR + N GD + +L Y W K+ S +WC I+ +
Sbjct: 857 IFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSW----KETNFSTQWCYENYIQVRS 912
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 913 MKRARDIRDQLEGLL 927
Score = 268 (99.4 bits), Expect = 1.8e-85, Sum P(3) = 1.8e-85
Identities = 56/131 (42%), Positives = 89/131 (67%)
Query: 17 LDFKQK-----EKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQI 71
+D KQK EK + L +++E + SLP+ Y+ +++ V + +V++I GDTG GK+TQI
Sbjct: 379 MDAKQKSQDLAEK-TALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQI 437
Query: 72 PQYLVQAGFQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKI 128
PQYL +AG+ + + CTQPRR+A +S++ RVA E + + VGY IRFE +KT +
Sbjct: 438 PQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVL 497
Query: 129 VFITEGLLLRQ 139
++T+G+LLR+
Sbjct: 498 KYMTDGMLLRE 508
Score = 200 (75.5 bits), Expect = 6.6e-37, Sum P(3) = 6.6e-37
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG CYRLY+ Y+ L E + PE++R ++ S++L+L +G+ D+ F F++ PPAE
Sbjct: 732 RTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAE 791
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ S+ L GA++ +T GR +++ P+D L KM+V + D ++ + L
Sbjct: 792 ALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAML 851
Query: 928 NFG 930
+ G
Sbjct: 852 SIG 854
Score = 119 (46.9 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER L D L G++K + ++K+++ SAT++ E F YF+
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFD 569
Score = 77 (32.2 bits), Expect = 1.8e-85, Sum P(3) = 1.8e-85
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER L D L G++K
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVK 541
Score = 73 (30.8 bits), Expect = 9.4e-24, Sum P(3) = 9.4e-24
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 980
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+ G
Sbjct: 797 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 854
Score = 73 (30.8 bits), Expect = 9.4e-24, Sum P(3) = 9.4e-24
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 1030
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+ G
Sbjct: 797 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 854
Score = 72 (30.4 bits), Expect = 6.0e-85, Sum P(3) = 6.0e-85
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++I+DE HER L D L G++
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLV 540
Score = 67 (28.6 bits), Expect = 3.9e-23, Sum P(3) = 3.9e-23
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+
Sbjct: 797 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLS 852
Score = 37 (18.1 bits), Expect = 3.0e-61, Sum P(3) = 3.0e-61
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 34 TQNSLPVAQYKQEIIDTVLK 53
T+ L +YK+E+ D V K
Sbjct: 258 TETELREFRYKKELYDLVKK 277
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 610 (219.8 bits), Expect = 2.8e-85, Sum P(4) = 2.8e-85
Identities = 161/466 (34%), Positives = 247/466 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E AD L Y V++LDE HER L D L G++K +L + ++K+++MSAT+ E F Y
Sbjct: 171 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDY 230
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A ++KVPGRL+P+++ Y E D ++ IR + I P GD+L
Sbjct: 231 FSG-APLMKVPGRLHPVEIFYTQEPERDYLEAA-------IRTVVQIHMCEPP---GDIL 279
Query: 430 IFMSGISEISSIVRAAQEY--NEKSQ-GWI-VLPLHSTLSLEEQDRVFHYAPEGL----- 480
+F++G EI R + N Q G I V+PL+STL Q ++F APE +
Sbjct: 280 VFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGP 339
Query: 481 --RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
RK +VSTNIAETS+TIDGI +V+D G K+ Y+ ++ +L ISKASA QR GR
Sbjct: 340 PGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGR 399
Query: 539 AGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPP 597
AGRT PG C+RLY+E+ ++ L + PEI R ++ + +L+L +G+ D+ F F++ P
Sbjct: 400 AGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 459
Query: 598 AENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAA 657
E + ++ L GA+D +T G +S+ P+D + KML+ F+ + +LS++A
Sbjct: 460 PETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSA 519
Query: 658 VLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRG 717
+LSV + F + A+ GD LT+LN Y + K WC
Sbjct: 520 MLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAF----KQNNEDPNWCYENF 575
Query: 718 IEEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERAL 760
I + +R Q +++ L TD D ++ R+ L
Sbjct: 576 INNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAML 621
Score = 211 (79.3 bits), Expect = 2.8e-85, Sum P(4) = 2.8e-85
Identities = 47/118 (39%), Positives = 73/118 (61%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA-----GFQR--- 82
I E + +LPV K+E + T+ + +I+ G+TG GK+TQIPQ+++ A +R
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+ CTQPRR+A +S+S+RVA E VGY IRFE +T + ++T+G+LLR+
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLRE 171
Score = 171 (65.3 bits), Expect = 3.6e-28, Sum P(4) = 3.6e-28
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ ++ L + PEI R ++ + +L+L +G+ D+ F F++ P E
Sbjct: 402 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 461
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA+D +T G +S+ P+D + KML+ F+ + +L + L
Sbjct: 462 TLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAML 521
Query: 928 N 928
+
Sbjct: 522 S 522
Score = 134 (52.2 bits), Expect = 8.2e-21, Sum P(3) = 8.2e-21
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ AD L Y V++LDE HER L D L G++K +L + ++K+++MSAT+ E F Y
Sbjct: 171 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDY 230
Query: 1175 FN 1176
F+
Sbjct: 231 FS 232
Score = 79 (32.9 bits), Expect = 2.8e-85, Sum P(4) = 2.8e-85
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
AD L Y V++LDE HER L D L G++K +L
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVL 207
Score = 73 (30.8 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
+ D L Y ++ILDE HER L D L G++ L
Sbjct: 171 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVL 207
Score = 73 (30.8 bits), Expect = 3.3e-18, Sum P(4) = 3.3e-18
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T++ LN+ GA+D +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 461 ETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAM 520
Query: 977 LN 978
L+
Sbjct: 521 LS 522
Score = 73 (30.8 bits), Expect = 3.3e-18, Sum P(4) = 3.3e-18
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T++ LN+ GA+D +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 461 ETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAM 520
Query: 1027 LN 1028
L+
Sbjct: 521 LS 522
Score = 73 (30.8 bits), Expect = 3.3e-18, Sum P(4) = 3.3e-18
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T++ LN+ GA+D +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 461 ETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAM 520
Query: 1077 LN 1078
L+
Sbjct: 521 LS 522
Score = 45 (20.9 bits), Expect = 8.8e-15, Sum P(4) = 8.8e-15
Identities = 19/88 (21%), Positives = 37/88 (42%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV--------LDEIHER--HLHGDFL--LGVIKCLL 305
++SP +C EI++ LS + + DE R H+ GD L L V
Sbjct: 503 IVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFK 562
Query: 306 HSTVEV--AADNFLSSYDVLVLDEIHER 331
+ + +NF+++ + D + ++
Sbjct: 563 QNNEDPNWCYENFINNRAMKSADNVRQQ 590
Score = 40 (19.1 bits), Expect = 2.8e-85, Sum P(4) = 2.8e-85
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 1186 STARSHKD--VTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFT 1243
ST + +D + I K +LA G + QVA + TVK D V LHP +
Sbjct: 604 STDFNSRDYYINIRKAMLA-GYFMQVAHLERTGHYLTVK-------DNQVVHLHPSNCLD 655
Query: 1244 SQPD 1247
+P+
Sbjct: 656 HKPE 659
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 613 (220.8 bits), Expect = 4.5e-85, Sum P(4) = 4.5e-85
Identities = 153/443 (34%), Positives = 243/443 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ L+ Y ++LDE HER L D L+G++K + ++KII+MSAT++ E F Y
Sbjct: 200 EAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNY 259
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRTERGDV 428
FN A ++ VPGR +P+++ Y P E R + LD IR +L I + GD+
Sbjct: 260 FNN-APLLAVPGRTHPVEIYYTP--EFQR---DYLDAA--IRTVLQI----HATEGEGDI 307
Query: 429 LIFMSGISEISSIVRAA-----QEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAP----- 477
L+F++G EI R + E++ G + V PL+ +L +Q ++F AP
Sbjct: 308 LLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNP 367
Query: 478 EGL--RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQR 535
G RK I+STNIAETS+TIDGI +VVD G K+ Y+ ++ +L ISKASA+QR
Sbjct: 368 NGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQR 427
Query: 536 KGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLE 594
GRAGRT PG C+RLY+EE + L E S PEI R ++ S +L L +G+ D+ F F++
Sbjct: 428 AGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMD 487
Query: 595 APPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLS 654
P E + ++ L + + +T+LGR S P+D L ML+ + + +L+
Sbjct: 488 PPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILT 547
Query: 655 LAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCK 714
+ A+LSV + F A + A+ GD LT++N Y+ ++ + + + KWC+
Sbjct: 548 IVAMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCR 607
Query: 715 RRGIEEQRFYEVTKLRSQFKQVL 737
+ + +R+Q ++++
Sbjct: 608 DNFLSYRSLTSAKNVRNQLQRLM 630
Score = 211 (79.3 bits), Expect = 4.5e-85, Sum P(4) = 4.5e-85
Identities = 45/121 (37%), Positives = 75/121 (61%)
Query: 25 FST-LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF--- 80
F+T I +T+ LPV ++E + ++++ G+TG GK+TQIPQ+++
Sbjct: 80 FTTKYFDILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHL 139
Query: 81 --QRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
+++ACTQPRR+A +S++ RVA E + VGY IRFE + KT + ++T+G+LLR
Sbjct: 140 TGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLR 199
Query: 139 Q 139
+
Sbjct: 200 E 200
Score = 169 (64.5 bits), Expect = 2.6e-27, Sum P(4) = 2.6e-27
Identities = 41/120 (34%), Positives = 64/120 (53%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+EE + L E S PEI R ++ S +L L +G+ D+ F F++ P E
Sbjct: 433 RTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPE 492
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L + + +T LGR S P+D L ML+ GS + +L +A+
Sbjct: 493 TMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLI-GSPAYSCSEEILTIVAM 551
Score = 132 (51.5 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D+ L+ Y ++LDE HER L D L+G++K + ++KII+MSAT++ E F YFN
Sbjct: 204 DHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNA 263
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 264 PLLAVPGRT 272
Score = 76 (31.8 bits), Expect = 4.5e-85, Sum P(4) = 4.5e-85
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D+ L+ Y ++LDE HER L D L+G++K
Sbjct: 204 DHDLTRYSCIILDEAHERTLATDILMGLLK 233
Score = 72 (30.4 bits), Expect = 1.2e-84, Sum P(4) = 1.2e-84
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D+ L+ Y +ILDE HER L D L+G++
Sbjct: 204 DHDLTRYSCIILDEAHERTLATDILMGLL 232
Score = 56 (24.8 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+TM+ LN+ + + +T+LGR S P+D L ML+ GS + +L +A
Sbjct: 492 ETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLI-GSPAYSCSEEILTIVA 550
Query: 977 L 977
+
Sbjct: 551 M 551
Score = 56 (24.8 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+TM+ LN+ + + +T+LGR S P+D L ML+ GS + +L +A
Sbjct: 492 ETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLI-GSPAYSCSEEILTIVA 550
Query: 1027 L 1027
+
Sbjct: 551 M 551
Score = 56 (24.8 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+TM+ LN+ + + +T+LGR S P+D L ML+ GS + +L +A
Sbjct: 492 ETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLI-GSPAYSCSEEILTIVA 550
Query: 1077 L 1077
+
Sbjct: 551 M 551
Score = 44 (20.5 bits), Expect = 3.4e-16, Sum P(5) = 3.4e-16
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 830 YSTPEIRRVSIDSLLLSLVCM----GLGDVRKFPFLEAPPAENIESSVRSLTQHG 880
Y TPE +R +D+ + +++ + G GD+ F E E IE + R ++ G
Sbjct: 278 YYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGE----EEIEDACRKISLEG 328
Score = 38 (18.4 bits), Expect = 4.5e-85, Sum P(4) = 4.5e-85
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1197 LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISE 1253
+K L +G + QVA ++ + KD V +HP +V + + + L +E
Sbjct: 653 VKKALVAGFFMQVA------KKKSGNKGYLTVKDNQDVLIHPSTVLSKEGEWLIYNE 703
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 629 (226.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 140/427 (32%), Positives = 243/427 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L+SY V+++DE HER LH D L G++K + ++K+++ SAT++ E F ++F+ A I
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD-API 534
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
++PGR +P+ + Y E D + I++I+ + GD+L+F++G
Sbjct: 535 FRIPGRRFPVDIYYTQAPEADYVDAA---------IVTIMQIHLTQPLPGDILVFLTGQE 585
Query: 437 EISSIVRAAQEYNE----KSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
EI ++ A E ++ K + I LP+++ L + Q ++F P+ RK +++TNIAET
Sbjct: 586 EIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAET 645
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+TIDGI +V+D G K+ S+D + + L ISKA+A QR GRAGRTGPG C+RLY+
Sbjct: 646 SVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYT 705
Query: 553 EEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
Y L E PEI+R ++ +++L L +G+ D+ F FL+ PP E + ++ L
Sbjct: 706 AWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYAL 765
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP-FTNRAF 670
GA++ + +T LGR +++ P D + KM++ + + ++++AA+LS + F
Sbjct: 766 GALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKA 825
Query: 671 RDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
+ ++ARK S GD +T++N Y +W ++ S++WC ++ + +R
Sbjct: 826 QVIHADSARKGFWSPAGDHITLMNVYNKW----QESSFSQRWCVENYVQHRTMKRARDVR 881
Query: 731 SQFKQVL 737
Q +L
Sbjct: 882 DQLVGLL 888
Score = 274 (101.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 56/115 (48%), Positives = 79/115 (68%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIA 84
M I ET+ SLPV ++ I+ V + +V+II G+TG GK+TQ+PQYL +AGF +RI
Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++ RVA E + VGY IRFE EKT + ++T+G+LLR+
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLRE 469
Score = 184 (69.8 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 39/124 (31%), Positives = 70/124 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY+ Y L E PEI+R ++ +++L L +G+ D+ F FL+ PP E
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQE 753
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ + +T LGR +++ P D + KM++ + + ++ + L
Sbjct: 754 TLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAML 813
Query: 928 NFGA 931
+ A
Sbjct: 814 SCNA 817
Score = 127 (49.8 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G++K + ++K+++ SAT++ E F ++F+
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Score = 87 (35.7 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKC---------LLHSTVEVAADNFLSSYD 321
L+SY V+++DE HER LH D L G++K LL S+ + A+ F S +D
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Score = 75 (31.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G++
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLV 501
Score = 63 (27.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 14/65 (21%), Positives = 35/65 (53%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+++ L+ GA++ + +T LGR +++ P D + KM++ + + ++ +
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAM 812
Query: 977 LNFGA 981
L+ A
Sbjct: 813 LSCNA 817
Score = 63 (27.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 14/65 (21%), Positives = 35/65 (53%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+++ L+ GA++ + +T LGR +++ P D + KM++ + + ++ +
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAM 812
Query: 1027 LNFGA 1031
L+ A
Sbjct: 813 LSCNA 817
Score = 61 (26.5 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 12/43 (27%), Positives = 27/43 (62%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+T+++ L+ GA++ + +T LGR +++ P D + KM++
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMII 795
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 629 (226.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 140/427 (32%), Positives = 243/427 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L+SY V+++DE HER LH D L G++K + ++K+++ SAT++ E F ++F+ A I
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD-API 534
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
++PGR +P+ + Y E D + I++I+ + GD+L+F++G
Sbjct: 535 FRIPGRRFPVDIYYTQAPEADYVDAA---------IVTIMQIHLTQPLPGDILVFLTGQE 585
Query: 437 EISSIVRAAQEYNE----KSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
EI ++ A E ++ K + I LP+++ L + Q ++F P+ RK +++TNIAET
Sbjct: 586 EIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAET 645
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+TIDGI +V+D G K+ S+D + + L ISKA+A QR GRAGRTGPG C+RLY+
Sbjct: 646 SVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYT 705
Query: 553 EEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
Y L E PEI+R ++ +++L L +G+ D+ F FL+ PP E + ++ L
Sbjct: 706 AWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYAL 765
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP-FTNRAF 670
GA++ + +T LGR +++ P D + KM++ + + ++++AA+LS + F
Sbjct: 766 GALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKA 825
Query: 671 RDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
+ ++ARK S GD +T++N Y +W ++ S++WC ++ + +R
Sbjct: 826 QVIHADSARKGFWSPAGDHITLMNVYNKW----QESSFSQRWCVENYVQHRTMKRARDVR 881
Query: 731 SQFKQVL 737
Q +L
Sbjct: 882 DQLVGLL 888
Score = 274 (101.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 56/115 (48%), Positives = 79/115 (68%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIA 84
M I ET+ SLPV ++ I+ V + +V+II G+TG GK+TQ+PQYL +AGF +RI
Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++ RVA E + VGY IRFE EKT + ++T+G+LLR+
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLRE 469
Score = 184 (69.8 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 39/124 (31%), Positives = 70/124 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY+ Y L E PEI+R ++ +++L L +G+ D+ F FL+ PP E
Sbjct: 694 RTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQE 753
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ + +T LGR +++ P D + KM++ + + ++ + L
Sbjct: 754 TLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAML 813
Query: 928 NFGA 931
+ A
Sbjct: 814 SCNA 817
Score = 127 (49.8 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G++K + ++K+++ SAT++ E F ++F+
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Score = 87 (35.7 bits), Expect = 5.3e-37, Sum P(3) = 5.3e-37
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKC---------LLHSTVEVAADNFLSSYD 321
L+SY V+++DE HER LH D L G++K LL S+ + A+ F S +D
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Score = 75 (31.5 bits), Expect = 5.6e-85, Sum P(3) = 5.6e-85
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G++
Sbjct: 476 LASYSVMMIDEAHERTLHTDILFGLV 501
Score = 63 (27.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 14/65 (21%), Positives = 35/65 (53%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+++ L+ GA++ + +T LGR +++ P D + KM++ + + ++ +
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAM 812
Query: 977 LNFGA 981
L+ A
Sbjct: 813 LSCNA 817
Score = 63 (27.2 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 14/65 (21%), Positives = 35/65 (53%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+++ L+ GA++ + +T LGR +++ P D + KM++ + + ++ +
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAM 812
Query: 1027 LNFGA 1031
L+ A
Sbjct: 813 LSCNA 817
Score = 61 (26.5 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 12/43 (27%), Positives = 27/43 (62%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+T+++ L+ GA++ + +T LGR +++ P D + KM++
Sbjct: 753 ETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMII 795
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 589 (212.4 bits), Expect = 5.7e-85, Sum P(4) = 5.7e-85
Identities = 154/441 (34%), Positives = 234/441 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ LS Y ++LDE HER L D L+G++K L ++KII+MSAT++ + F Y
Sbjct: 181 EAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKY 240
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRTERGDV 428
F A ++ VPGR YP+++ Y E D ++ +R +L I ++ P GD+
Sbjct: 241 FFD-APLLAVPGRTYPVEIYYTQEPERDYLEAA-------LRTVLQIHVEEGP----GDI 288
Query: 429 LIFMSGISEISSIVR-----AAQEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGL-- 480
L+F++G EI R A E + G + V PL+ +L +Q R+F PE
Sbjct: 289 LVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKS 348
Query: 481 ---RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKG 537
RK ++STNIAETS+TIDGI +VVD G K+ Y+ ++ +L ISKASA+QR G
Sbjct: 349 GYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAG 408
Query: 538 RAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAP 596
RAGRT PG C+RLY+EE + L E + PEI R ++ S +L L +G+ D+ F +++ P
Sbjct: 409 RAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPP 468
Query: 597 PAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLA 656
E + ++ L +D +T LGR S+ P+D L ML+ F+ + VLSL
Sbjct: 469 APETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLT 528
Query: 657 AVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRR 716
A+LSV + F + R++ GD LT+LN Y + K + WC
Sbjct: 529 ALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAY----KSGEGTADWCWNH 584
Query: 717 GIEEQRFYEVTKLRSQFKQVL 737
+ + +R Q ++ +
Sbjct: 585 FLSHRALISADNVRKQLRRTM 605
Score = 227 (85.0 bits), Expect = 5.7e-85, Sum P(4) = 5.7e-85
Identities = 49/126 (38%), Positives = 74/126 (58%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F K KI ET+ LPV Q ++E + + ++++ G+TG GK+TQIPQ+++
Sbjct: 56 FNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYD 115
Query: 79 GFQ-----RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITE 133
+IACTQPRR+A +S++KRVA E VGY IRFE T + ++T+
Sbjct: 116 ELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTD 175
Query: 134 GLLLRQ 139
G+LLR+
Sbjct: 176 GMLLRE 181
Score = 169 (64.5 bits), Expect = 5.4e-30, Sum P(4) = 5.4e-30
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+EE + L E + PEI R ++ S +L L +G+ D+ F +++ P E
Sbjct: 412 RTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPE 471
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L +D +T LGR S+ P+D L ML+ F+ + +L L L
Sbjct: 472 TMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALL 531
Query: 928 N 928
+
Sbjct: 532 S 532
Score = 130 (50.8 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ D+ LS Y ++LDE HER L D L+G++K L ++KII+MSAT++ + F Y
Sbjct: 181 EAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKY 240
Query: 1175 F 1175
F
Sbjct: 241 F 241
Score = 83 (34.3 bits), Expect = 5.7e-85, Sum P(4) = 5.7e-85
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ TD+ LS Y +ILDE HER L D L+G++
Sbjct: 181 EAMTDHMLSRYSCIILDEAHERTLATDILMGLM 213
Score = 82 (33.9 bits), Expect = 7.2e-85, Sum P(4) = 7.2e-85
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
D+ LS Y ++LDE HER L D L+G++K L
Sbjct: 185 DHMLSRYSCIILDEAHERTLATDILMGLMKRL 216
Score = 70 (29.7 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 47/211 (22%), Positives = 91/211 (43%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+TM+ LN+ +D +T LGR S+ P+D L ML+ F+ + +L L
Sbjct: 471 ETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTAL 530
Query: 1077 LN----FVH-HSXXXXXXXAGERLESMDANEVEF-RLKHDPKQVQVAAD----NFLSSYD 1126
L+ FV +S ++ D + + + H K + AD +FLS
Sbjct: 531 LSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRA 590
Query: 1127 VLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGS 1186
++ D + ++ L ++ L+ + + K ++ I L +F ++AK +G
Sbjct: 591 LISADNVRKQ-LRRTMERQEVE-LISTPFDDKNYYVN--IRRALVSGFFMQVAKKSANGK 646
Query: 1187 TARSHKDVTILKVILASGLY--PQVAIGDEF 1215
+ KD ++ + + GL P+ + +EF
Sbjct: 647 NYVTMKDNQVVSLHPSCGLSVTPEWVVYNEF 677
Score = 62 (26.9 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+TM+ LN+ +D +T LGR S+ P+D L ML+ F+ + +L L
Sbjct: 471 ETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTAL 530
Query: 977 LN 978
L+
Sbjct: 531 LS 532
Score = 62 (26.9 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+TM+ LN+ +D +T LGR S+ P+D L ML+ F+ + +L L
Sbjct: 471 ETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTAL 530
Query: 1027 LN 1028
L+
Sbjct: 531 LS 532
Score = 44 (20.5 bits), Expect = 2.8e-17, Sum P(4) = 2.8e-17
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 260 SPPLHCGGEIVAADYFLSSYDVLV--------LDEIHERHLH--GDFL--LGVIKCLL-- 305
SP +C E+++ LS +V V DE+ ++ H GD L L V
Sbjct: 515 SPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSG 574
Query: 306 HSTVEVAADNFLSSYDVLVLDEIHER 331
T + ++FLS ++ D + ++
Sbjct: 575 EGTADWCWNHFLSHRALISADNVRKQ 600
Score = 39 (18.8 bits), Expect = 5.7e-85, Sum P(4) = 5.7e-85
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST K+ + ++ L SG + QVA S K + KD VSLHP +
Sbjct: 614 STPFDDKNYYVNIRRALVSGFFMQVA-----KKSANGKNYVT-MKDNQVVSLHPSCGLSV 667
Query: 1245 QPD 1247
P+
Sbjct: 668 TPE 670
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 606 (218.4 bits), Expect = 1.3e-84, Sum P(4) = 1.3e-84
Identities = 159/466 (34%), Positives = 247/466 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E AD L Y V++LDE HER L D L G++K +L + ++K+++MSAT+ E F Y
Sbjct: 175 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEY 234
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A ++KVPGRL+P+++ Y E D ++ IR + I P GD+L
Sbjct: 235 FSG-APLMKVPGRLHPVEIFYTQEPERDYLEAA-------IRTVVQIHMCEPP---GDIL 283
Query: 430 IFMSGISEISSIVRAAQEY--NEKSQ-GWI-VLPLHSTLSLEEQDRVFHYAPEGL----- 480
+F++G EI R + N Q G + V+PL+STL Q ++F AP L
Sbjct: 284 VFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGP 343
Query: 481 --RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
RK +VSTNIAETS+TIDGI +V+D G K+ Y+ ++ +L ISKASA QR GR
Sbjct: 344 AGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGR 403
Query: 539 AGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPP 597
AGRT PG C+RLY+E+ ++ L + PEI R ++ + +L+L +G+ D+ F F++ P
Sbjct: 404 AGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPA 463
Query: 598 AENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAA 657
E + ++ L GA+D + +T G +S+ P+D + KML+ F+ + +LS++A
Sbjct: 464 PETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSA 523
Query: 658 VLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRG 717
+LSV + F + A+ GD LT+LN Y + K WC
Sbjct: 524 MLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY----KQNNEDPNWCFENF 579
Query: 718 IEEQRFYEVTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERAL 760
+ + +R Q +++ L TD D ++ R+ L
Sbjct: 580 VNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAML 625
Score = 207 (77.9 bits), Expect = 1.3e-84, Sum P(4) = 1.3e-84
Identities = 46/119 (38%), Positives = 73/119 (61%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA--------GFQ 81
+I E + LPV K + ++T+ + +I+ G+TG GK+TQIPQ+++ A G +
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 82 -RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+ CTQPRR+A +S+S+RVA E VGY IRFE +T + ++T+G+LLR+
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLRE 175
Score = 173 (66.0 bits), Expect = 4.0e-28, Sum P(4) = 4.0e-28
Identities = 37/121 (30%), Positives = 69/121 (57%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ ++ L + PEI R ++ + +L+L +G+ D+ F F++ P E
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA+D + +T G +S+ P+D + KML+ F+ + +L + L
Sbjct: 466 TLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAML 525
Query: 928 N 928
+
Sbjct: 526 S 526
Score = 135 (52.6 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ AD L Y V++LDE HER L D L G++K +L + ++K+++MSAT+ E F Y
Sbjct: 175 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEY 234
Query: 1175 FN 1176
F+
Sbjct: 235 FS 236
Score = 80 (33.2 bits), Expect = 1.3e-84, Sum P(4) = 1.3e-84
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
AD L Y V++LDE HER L D L G++K +L +
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRN 213
Score = 75 (31.5 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T++ LN+ GA+D + +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 977 LN 978
L+
Sbjct: 525 LS 526
Score = 75 (31.5 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T++ LN+ GA+D + +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 1027 LN 1028
L+
Sbjct: 525 LS 526
Score = 75 (31.5 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T++ LN+ GA+D + +T G +S+ P+D + KML+ F+ + +L +
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 1077 LN 1078
L+
Sbjct: 525 LS 526
Score = 73 (30.8 bits), Expect = 6.7e-84, Sum P(4) = 6.7e-84
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
+ D L Y ++ILDE HER L D L G++ L
Sbjct: 175 EAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVL 211
Score = 44 (20.5 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV--------LDEIHER--HLHGDFL 297
++SP +C EI++ LS + V DE R H+ GD L
Sbjct: 507 IVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHL 556
Score = 41 (19.5 bits), Expect = 1.3e-84, Sum P(4) = 1.3e-84
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 1186 STARSHKD--VTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFT 1243
ST + +D V I K +LA G + QVA + TVK D V LHP +
Sbjct: 608 STDFNSRDYYVNIRKAMLA-GYFMQVAHLERTGHYLTVK-------DNQVVHLHPSNCLD 659
Query: 1244 SQPD 1247
+P+
Sbjct: 660 HKPE 663
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 693 (249.0 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 155/436 (35%), Positives = 252/436 (57%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D FL YD L++DE HER L+ DFLLG +K LL ++K+++ SATI+ E F +
Sbjct: 178 ETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRH 237
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A I++VPGR YP+++ Y P + +S++ + G IL +D+ + R GD+L
Sbjct: 238 FDN-APIVRVPGRTYPVEIRYRPPDSAEE-ESDETERGEQQAILDAVDELH-RENTGDIL 294
Query: 430 IFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNI 489
IF+SG EI + ++++ VLPL+S L++ EQ+++F P G R+ +++TN+
Sbjct: 295 IFLSGEREIRDTAESLRKHHPADCE--VLPLYSRLTVSEQEKIFK--PHGRRRIVLATNV 350
Query: 490 AETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYR 549
AETS+T+ GIR V+D+G + Y +K+ L IS+ASA QR GR GR GPGVC R
Sbjct: 351 AETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIR 410
Query: 550 LYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLT 609
LYSE+ + E++ PEI R ++ +++L + + LGD+R FPF+E P + +R+L
Sbjct: 411 LYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQ 470
Query: 610 QHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRA 669
+ A+D++ R+T LGR L+ LPVD LG++L+ G+ + + V + A LSV P A
Sbjct: 471 EINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPA 530
Query: 670 FRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK--KWCKRRGIEEQRFYEVT 727
+ + D + +L + ++ ++ SK ++C+ + R E
Sbjct: 531 DKAQAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWR 590
Query: 728 KLRSQFKQVL-GDSGL 742
+ Q +V+ G+ GL
Sbjct: 591 DIHQQILEVVKGELGL 606
Score = 238 (88.8 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 49/129 (37%), Positives = 82/129 (63%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R GPGVC RLYSE+ + E++ PEI R ++ +++L + + LGD+R FPF+E P
Sbjct: 402 RVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERL 461
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+ +R+L + A+D++ R+T LGR L+ LPVD LG++L+ G+ + + + ++ AL+
Sbjct: 462 VRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALS 521
Query: 929 FGAIDSKER 937
D +ER
Sbjct: 522 VP--DPRER 528
Score = 194 (73.4 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 43/110 (39%), Positives = 67/110 (60%)
Query: 33 ETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG--FQR-IACTQPR 89
E LPV++ + EI + + + +VVI+ G+TG GK+TQ+P+ ++AG Q I TQPR
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
RIA S++ R+A E VGY++RF R + I +T+G+LL +
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAE 178
Score = 143 (55.4 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ D FL YD L++DE HER L+ DFLLG +K LL ++K+++ SATI+ E F +
Sbjct: 178 ETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRH 237
Query: 1175 FN 1176
F+
Sbjct: 238 FD 239
Score = 101 (40.6 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D FL YD L++DE HER L+ DFLLG +K LL
Sbjct: 182 DRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLL 214
Score = 96 (38.9 bits), Expect = 5.4e-84, Sum P(4) = 5.4e-84
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ TD FL YD LI+DE HER L DFLLG +
Sbjct: 178 ETQTDRFLDQYDTLIVDEAHERSLNIDFLLGYL 210
Score = 83 (34.3 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
A+D++ R+T LGR L+ LPVD LG++L+ G+ + + + ++ AL+ D +ER
Sbjct: 474 ALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVP--DPRER 528
Score = 83 (34.3 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
A+D++ R+T LGR L+ LPVD LG++L+ G+ + + + ++ AL+ D +ER
Sbjct: 474 ALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVP--DPRER 528
Score = 80 (33.2 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
A+D++ R+T LGR L+ LPVD LG++L+ G+ + + + ++ AL+
Sbjct: 474 ALDAQGRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALS 521
Score = 42 (19.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 213 NEVEFRLKH--DPKQVQVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIV 270
N+ E + +H K Q DNFLS+ + ++H++ +L V+ L V
Sbjct: 558 NDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQ------ILEVVKGELGLRPNQV 611
Query: 271 AADY 274
ADY
Sbjct: 612 PADY 615
Score = 37 (18.1 bits), Expect = 1.6e-84, Sum P(4) = 1.6e-84
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 856 RKFPFLEAPPAENIESSVRSLTQHGAIDSK 885
RK P+ PA E +RS DSK
Sbjct: 728 RKVPYENVDPAGARELFIRSALVRMDYDSK 757
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 588 RKFPFLEAPPAENIESSVRSLTQHGAIDSK 617
RK P+ PA E +RS DSK
Sbjct: 728 RKVPYENVDPAGARELFIRSALVRMDYDSK 757
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 600 (216.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 156/461 (33%), Positives = 241/461 (52%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y VL+LDE HER L D L+G+IK ++ + A++K+++MSAT++ F YF +
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED-CPL 253
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+ VPGR +P+++ + P E D ++ I ++I GD+L+F++G
Sbjct: 254 LSVPGRTFPVEIFFTPNAEKDYLEAA---------IRTVIQIHMVEEVEGDILLFLTGQE 304
Query: 437 EISS----IVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAP----EGL--RKCIVS 486
EI I R Q + +PL+STL Q R+F AP G RKC++S
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA QR GRAGRT PG
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 547 CYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
C+RLY+E Y S + + + PEI R ++ S++L L +G D+ F F++ P E + ++
Sbjct: 425 CFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRAL 484
Query: 606 RSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
L AI+ +T LG +++ P+D L KML+ + + + +LS+ A+LSV +
Sbjct: 485 ELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCW 544
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+ + A+ GD LT+LN Y + K +WC I +
Sbjct: 545 VRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSF----KQNQEDPQWCYDNFINYRTMKT 600
Query: 726 VTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+R+Q +V+ L TD D L+ R +AL G
Sbjct: 601 ADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIR-KALVAG 640
Score = 204 (76.9 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 47/120 (39%), Positives = 73/120 (60%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ----------AGF 80
I E ++ LPV +YK++ ++ + + + + G+TG GK+TQIPQ+ V+ G
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 81 QR-IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
R +ACTQPRR+A +S++ RVA E VGY IRFE E+T + + T+G+LLR+
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Score = 164 (62.8 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E Y S + + + PEI R ++ S++L L +G D+ F F++ P E
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPE 478
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L AI+ +T LG +++ P+D L KML+
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 134 (52.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
L Y VL+LDE HER L D L+G+IK ++ + A++K+++MSAT++ F YF
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF 248
Score = 83 (34.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
L Y VL+LDE HER L D L+G+IK ++ + ++
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADI 230
Score = 75 (31.5 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +LILDE HER L D L+G+I
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLI 220
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 46 (21.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST +D + ++ L +G + QVA + TVK D V+LHP +V
Sbjct: 621 STDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVK-------DNQLVNLHPSTVLDH 673
Query: 1245 QPD 1247
+P+
Sbjct: 674 KPE 676
Score = 38 (18.4 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 29 MKIRETQNSLPVAQYKQEIID 49
M +RE NS + +YK I+D
Sbjct: 184 MLLREAMNSPLLDKYKVLILD 204
Score = 38 (18.4 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 219 LKHDPKQVQVATDNFLSSYDILILDEVHERHLYGDFLL 256
L+ V V + ++ + +LD E LY +F+L
Sbjct: 648 LERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVL 685
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 600 (216.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 156/461 (33%), Positives = 241/461 (52%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y VL+LDE HER L D L+G+IK ++ + A++K+++MSAT++ F YF +
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFED-CPL 253
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+ VPGR +P+++ + P E D ++ I ++I GD+L+F++G
Sbjct: 254 LSVPGRTFPVEIFFTPNAEKDYLEAA---------IRTVIQIHMVEEVEGDILLFLTGQE 304
Query: 437 EISS----IVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAP----EGL--RKCIVS 486
EI I R Q + +PL+STL Q R+F AP G RKC++S
Sbjct: 305 EIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVIS 364
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA QR GRAGRT PG
Sbjct: 365 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGK 424
Query: 547 CYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
C+RLY+E Y S + + + PEI R ++ S++L L +G D+ F F++ P E + ++
Sbjct: 425 CFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRAL 484
Query: 606 RSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
L AI+ +T LG +++ P+D L KML+ + + + +LS+ A+LSV +
Sbjct: 485 ELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCW 544
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+ + A+ GD LT+LN Y + K +WC I +
Sbjct: 545 VRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSF----KQNQEDPQWCYDNFINYRTMKT 600
Query: 726 VTKLRSQFKQVLGDSGL---ITDIPGPDASLSSRERALRHG 763
+R+Q +V+ L TD D L+ R +AL G
Sbjct: 601 ADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIR-KALVAG 640
Score = 204 (76.9 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 47/120 (39%), Positives = 73/120 (60%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ----------AGF 80
I E ++ LPV +YK++ ++ + + + + G+TG GK+TQIPQ+ V+ G
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 81 QR-IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
R +ACTQPRR+A +S++ RVA E VGY IRFE E+T + + T+G+LLR+
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Score = 164 (62.8 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E Y S + + + PEI R ++ S++L L +G D+ F F++ P E
Sbjct: 419 RTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPE 478
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L AI+ +T LG +++ P+D L KML+
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 134 (52.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
L Y VL+LDE HER L D L+G+IK ++ + A++K+++MSAT++ F YF
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF 248
Score = 83 (34.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
L Y VL+LDE HER L D L+G+IK ++ + ++
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADI 230
Score = 75 (31.5 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +LILDE HER L D L+G+I
Sbjct: 195 LDKYKVLILDEAHERTLATDILMGLI 220
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 62 (26.9 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
M L+L LN+ AI+ +T LG +++ P+D L KML+
Sbjct: 481 MRALEL-LNYLQAINDDGELTELGSLMAEFPLDPQLAKMLI 520
Score = 46 (21.3 bits), Expect = 1.7e-84, Sum P(4) = 1.7e-84
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST +D + ++ L +G + QVA + TVK D V+LHP +V
Sbjct: 621 STDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVK-------DNQLVNLHPSTVLDH 673
Query: 1245 QPD 1247
+P+
Sbjct: 674 KPE 676
Score = 38 (18.4 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 29 MKIRETQNSLPVAQYKQEIID 49
M +RE NS + +YK I+D
Sbjct: 184 MLLREAMNSPLLDKYKVLILD 204
Score = 38 (18.4 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 219 LKHDPKQVQVATDNFLSSYDILILDEVHERHLYGDFLL 256
L+ V V + ++ + +LD E LY +F+L
Sbjct: 648 LERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVL 685
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 583 (210.3 bits), Expect = 2.1e-84, Sum P(3) = 2.1e-84
Identities = 149/453 (32%), Positives = 241/453 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L Y +++LDE+HER L D LLGV+K +L + +++L SA+++ +
Sbjct: 130 EIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQF 189
Query: 370 FNRIAKI--IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGD 427
F + K+ + + G+L+P++ + L + +D I + I+ YP GD
Sbjct: 190 FGQ-DKVCTMSIEGKLFPVETLF-----LQKPTENYVDSA--IETVININSTYPP---GD 238
Query: 428 VLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
+L+F+SG EI ++ ++ +E Q + LPLH+ L+++EQ RVF+ RK
Sbjct: 239 ILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKV 298
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I STNIAETSITIDGI +VVDSG K+ Y+ + S L ISK+SA QR GRAGRT
Sbjct: 299 IFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTM 358
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G +RLY+E+ YSL+ E +I + L+L L +GL ++ +FPF PP ++ +
Sbjct: 359 RGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMA 418
Query: 604 SVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQ 662
++ L G +D +T LG +S+ +D + K L+ + F +LS+A++L+
Sbjct: 419 ALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAG 478
Query: 663 SPFTNRAFRDP-DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
F N D A +N GD +T LN ++ ++G KKD +WC++ + Q
Sbjct: 479 EVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDL----QWCRKNYLNYQ 534
Query: 722 RFYEVTKLRSQFKQVLGDSGLITD--IPGPDAS 752
+ +R+ + L + T +P D S
Sbjct: 535 TLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCS 567
Score = 240 (89.5 bits), Expect = 2.1e-84, Sum P(3) = 2.1e-84
Identities = 46/106 (43%), Positives = 73/106 (68%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IACTQPRRIAC 93
LP+ +Y+ +++ V + ++ I+ G TGCGK+TQIPQ+L +AG+ I CTQPRR+
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 94 ISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
S+S+RV+ E S +L GY I+F+ + EKTKI ++T+G+LL +
Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNE 130
Score = 134 (52.2 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT G +RLY+E+ YSL+ E +I + L+L L +GL ++ +FPF PP +
Sbjct: 356 RTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVH 415
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ +++ L G +D +T LG +S+ +D + K L+ + F +L + L
Sbjct: 416 LMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASIL 475
Query: 928 NFGAI 932
G +
Sbjct: 476 TAGEV 480
Score = 117 (46.2 bits), Expect = 3.7e-23, Sum P(2) = 3.7e-23
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L Y +++LDE+HER L D LLGV+K +L + +++L SA+++ +
Sbjct: 130 EIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQF 189
Query: 1175 FNR 1177
F +
Sbjct: 190 FGQ 192
Score = 89 (36.4 bits), Expect = 2.1e-84, Sum P(3) = 2.1e-84
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L Y +++LDE+HER L D LLGV+K +L
Sbjct: 134 DPLLERYSIVILDEVHERTLSTDLLLGVLKRIL 166
Score = 85 (35.0 bits), Expect = 5.5e-84, Sum P(3) = 5.5e-84
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L Y I+ILDEVHER L D LLGV+
Sbjct: 130 EIFFDPLLERYSIVILDEVHERTLSTDLLLGVL 162
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 570 (205.7 bits), Expect = 2.3e-84, Sum P(4) = 2.3e-84
Identities = 138/409 (33%), Positives = 228/409 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
EV AD L+ Y V+++DE HER++ D +LG++K +L + +K+I+ SATI+ F +
Sbjct: 151 EVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEF 210
Query: 370 FN-----RIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRT 423
F+ ++ + + GR++P+ Y L+ ++ Y++ + + K + +
Sbjct: 211 FSWPGSGEVSVKLSIEGRMHPVSNFY-----LNEPCAD------YVKETVETVWKLHQKE 259
Query: 424 ERGDVLIFMSGISEISSIVRAAQEY--NEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLR 481
GD+L F++G E+ + +EY + + + VLP++ ++S +Q VF P+G R
Sbjct: 260 PPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTR 319
Query: 482 KCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGR 541
K +++TNIAETSITI GI +V+D G VK Y+ +L +SKASA QR GRAGR
Sbjct: 320 KVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGR 379
Query: 542 TGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENI 601
PG YRLY++ Y LA PE+RR + +L L +G+G++ +F F PPA+N+
Sbjct: 380 MRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNL 439
Query: 602 ESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
S++ SL AID + +T +G L++LP L KML + ++++ A+L
Sbjct: 440 LSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQ 499
Query: 661 VQSPFTN--RAFRDPDCETARKELESNHGDPLTVLNAYKEWL--GVKKD 705
VQS F+ A A ++ E GD +T+LNAY ++ G+ K+
Sbjct: 500 VQSIFSRPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKE 548
Score = 238 (88.8 bits), Expect = 2.3e-84, Sum P(4) = 2.3e-84
Identities = 49/114 (42%), Positives = 74/114 (64%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IAC 85
M + E + LP+ QY+ +I+ + K +VVI+ G+TG GKSTQ+PQYL + G+ I
Sbjct: 38 MGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGI 97
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR++ ++L+ RVA E + VGY +RF + TKI F+TEG+LLR+
Sbjct: 98 TEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLRE 151
Score = 187 (70.9 bits), Expect = 1.3e-33, Sum P(4) = 1.3e-33
Identities = 45/119 (37%), Positives = 67/119 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG YRLY++ Y LA PE+RR + +L L +G+G++ +F F PPA+N
Sbjct: 379 RMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQN 438
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKML-VFGSM--FHQIDTMLLL 923
+ S++ SL AID + +T +G L++LP L KML V G M +I T++ L
Sbjct: 439 LLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIAL 497
Score = 135 (52.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 29/83 (34%), Positives = 53/83 (63%)
Query: 1095 LESMDA-NEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 1153
LESM + +++F + + +V AD L+ Y V+++DE HER++ D +LG++K +L
Sbjct: 131 LESMSSCTKIKFMTEGILLR-EVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRK 189
Query: 1154 TAEVKIILMSATINIELFHTYFN 1176
+ +K+I+ SATI+ F +F+
Sbjct: 190 RSSLKLIISSATIDASFFSEFFS 212
Score = 86 (35.3 bits), Expect = 2.3e-84, Sum P(4) = 2.3e-84
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
V AD L+ Y V+++DE HER++ D +LG++K +L
Sbjct: 152 VLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKIL 187
Score = 80 (33.2 bits), Expect = 9.6e-84, Sum P(4) = 9.6e-84
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+V D L+ Y ++I+DE HER++ D +LG++
Sbjct: 151 EVLADPLLTQYGVIIVDEAHERNMLTDMILGLL 183
Score = 52 (23.4 bits), Expect = 8.0e-20, Sum P(4) = 8.0e-20
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 931 AIDSKERVTS-LGRFLSDLPVDIPLGKML-VFGSM--FHQIDTMLLL 973
AID + +T +G L++LP L KML V G M +I T++ L
Sbjct: 451 AIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIAL 497
Score = 52 (23.4 bits), Expect = 8.0e-20, Sum P(4) = 8.0e-20
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 981 AIDSKERVTS-LGRFLSDLPVDIPLGKML-VFGSM--FHQIDTMLLL 1023
AID + +T +G L++LP L KML V G M +I T++ L
Sbjct: 451 AIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIAL 497
Score = 52 (23.4 bits), Expect = 8.0e-20, Sum P(4) = 8.0e-20
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 1031 AIDSKERVTS-LGRFLSDLPVDIPLGKML-VFGSM--FHQIDTMLLL 1073
AID + +T +G L++LP L KML V G M +I T++ L
Sbjct: 451 AIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIAL 497
Score = 39 (18.8 bits), Expect = 2.3e-84, Sum P(4) = 2.3e-84
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1276 QLLVYMSLLETSKPFL 1291
Q +VY LL+T+K F+
Sbjct: 637 QYVVYGELLQTTKLFM 652
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 39 PVAQYKQEIIDTVLK 53
P A Y +E ++TV K
Sbjct: 240 PCADYVKETVETVWK 254
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 650 (233.9 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 154/435 (35%), Positives = 241/435 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS+Y V++LDE HER + D L G++K L E+K+++ SAT+ E F Y
Sbjct: 612 ECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKY 671
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A++ +PGR +P+ + Y E D LD I ++ I + P GD+L
Sbjct: 672 FMN-AQLFIIPGRTFPVDIRYTKDPEADY-----LDAS-LITVMQIHLSEPP----GDIL 720
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + + E KS G I+LP++S L E Q ++F AP G RK +
Sbjct: 721 LFLTGQEEIDAACQILYE-RMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVV 779
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +V+D G K+ ++ M +L IS+A+A QR GRAGRTGP
Sbjct: 780 IATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGP 839
Query: 545 GVCYRLYSEEQYS--LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIE 602
G CYRLY+E + +LA S PEI+R ++ + +L++ MG+ D+ F F++ PP + +
Sbjct: 840 GKCYRLYTESAFKNEMLAS-SIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLV 898
Query: 603 SSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQ 662
S++ L GA+D + +T LGR +++ P+D L KML+ D +L++ A+LSVQ
Sbjct: 899 SAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQ 958
Query: 663 SPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
+ F + + + + GD LT+LN Y+ W K+ S WC ++ +
Sbjct: 959 NVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESW----KNSKFSNPWCFENFVQARS 1014
Query: 723 FYEVTKLRSQFKQVL 737
+R Q ++
Sbjct: 1015 LRRAQDVRKQLITIM 1029
Score = 248 (92.4 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 53/136 (38%), Positives = 87/136 (63%)
Query: 8 EWKLLLR-TYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
EWK + + +++ + + +T I+E + SLP+ ++ + V + +++++ G+TG G
Sbjct: 481 EWKKVTQGSHIQYGK----ATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSG 536
Query: 67 KSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRR 123
K+TQ+ QYL +AG+ +I CTQPRR+A +S+SKRVA E Q VGY IRFE
Sbjct: 537 KTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTS 596
Query: 124 EKTKIVFITEGLLLRQ 139
+T I F+T+G+LLR+
Sbjct: 597 PETIIKFMTDGILLRE 612
Score = 211 (79.3 bits), Expect = 6.7e-36, Sum P(3) = 6.7e-36
Identities = 41/103 (39%), Positives = 67/103 (65%)
Query: 809 RTGPGVCYRLYSEEQYS--LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 866
RTGPG CYRLY+E + +LA S PEI+R ++ + +L++ MG+ D+ F F++ PP
Sbjct: 836 RTGPGKCYRLYTESAFKNEMLAS-SIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPV 894
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ + S++ L GA+D + +T LGR +++ P+D L KML+
Sbjct: 895 QTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLI 937
Score = 130 (50.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D LS+Y V++LDE HER + D L G++K L E+K+++ SAT+ E F YF
Sbjct: 616 DPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNA 675
Query: 1179 AKDLLSGST 1187
++ G T
Sbjct: 676 QLFIIPGRT 684
Score = 79 (32.9 bits), Expect = 3.4e-84, Sum P(3) = 3.4e-84
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
LS+Y V++LDE HER + D L G++K L E+
Sbjct: 619 LSAYSVIILDEAHERTISTDVLFGLLKQALQRRPEL 654
Score = 75 (31.5 bits), Expect = 9.0e-84, Sum P(3) = 9.0e-84
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
D LS+Y ++ILDE HER + D L G++ L
Sbjct: 616 DPNLSAYSVIILDEAHERTISTDVLFGLLKQAL 648
Score = 72 (30.4 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 870 ESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQ-IDTML-LLDLAL 927
ES+ ++ +I +R T LG + + + + +L F M + T++ ++
Sbjct: 848 ESAFKNEMLASSIPEIQR-TNLGNTVLTMKA-MGINDLLNFDFMDPPPVQTLVSAMEQLY 905
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+ GA+D + +T LGR +++ P+D L KML+
Sbjct: 906 SLGALDEEGLLTRLGRKMAEFPLDPQLSKMLI 937
Score = 70 (29.7 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 967 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+ T++ ++ + GA+D + +T LGR +++ P+D L KML+
Sbjct: 894 VQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLI 937
Score = 70 (29.7 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 1017 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+ T++ ++ + GA+D + +T LGR +++ P+D L KML+
Sbjct: 894 VQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLI 937
Score = 39 (18.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 569 RVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
+V I S+ S + + + DV + + P +NI+S +
Sbjct: 258 KVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSII 294
Score = 38 (18.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 470 DRVFHYAPEG--LRKCIVSTNIAETSITI 496
+ + + +G LR+C++ N++ S+ I
Sbjct: 598 ETIIKFMTDGILLRECLLDPNLSAYSVII 626
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 564 (203.6 bits), Expect = 4.3e-84, Sum P(5) = 4.3e-84
Identities = 128/365 (35%), Positives = 211/365 (57%)
Query: 393 IVELDRTKSEKLDPGPYIRILS-IIDKKYPRTERGDVLIFMSGISEISSIVRAAQE---Y 448
+++LD+ E ++ +L I+D K+ G VLIF+ G++EI + Q +
Sbjct: 813 VMDLDKVNLELIEA-----LLEWIVDGKHSYPP-GAVLIFLPGLAEIKMLYEQLQSNALF 866
Query: 449 NEK-SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGK 507
N + S+ +V PLHS+LS EEQ VF P G+ K I+STNIAETS+TID + +V+DSGK
Sbjct: 867 NNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGK 926
Query: 508 VKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPE 566
+KE YD + M +L++ ++S+A+A QRKGRAGR GVC+ L+S Y+ L + PE
Sbjct: 927 MKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPE 986
Query: 567 IRRVSIDSLLLSLVCMGLGDVRKFP-----FLEAPPAENIESSVRSLTQHGAIDSKERVT 621
I+RV ++ L L + + + + +E P E++ +S L GA+ + E++T
Sbjct: 987 IQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLT 1046
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
LG L+ LPVD+ +GK+++FG++F +D L++AA L+ +SPF + + + + +
Sbjct: 1047 PLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLD 1106
Query: 682 LESNHGDPLTVLNAYKEW-LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDS 740
+ D L +L AYK W L K+ S +C+ + + E+ L+ QF ++L D
Sbjct: 1107 FAVGNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDI 1166
Query: 741 GLITD 745
G + +
Sbjct: 1167 GFVKE 1171
Score = 243 (90.6 bits), Expect = 4.3e-84, Sum P(5) = 4.3e-84
Identities = 56/152 (36%), Positives = 91/152 (59%)
Query: 2 SPALYEE-WKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
S + Y E K+ ++ L K +F +++ R+ LP Q ++ I+D + +V++++
Sbjct: 504 SKSTYNENVKICMQFRLK-KSSRRFQSMLHERQ---KLPAWQERETILDLLTSHQVLVVS 559
Query: 61 GDTGCGKSTQIPQYLVQAGFQ-------RIACTQPRRIACISLSKRVAYETLSQYSNLVG 113
G TGCGK+TQIPQ+++ A Q I CTQPRRI+ IS+++RVA E + VG
Sbjct: 560 GMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVG 619
Query: 114 YQIRFEKHRREKTKIVFITEGLLLRQDSGLIT 145
YQIR E + T++++ T G+LLR+ G +T
Sbjct: 620 YQIRLESVKSSATRLLYCTTGVLLRRLEGDLT 651
Score = 179 (68.1 bits), Expect = 6.1e-42, Sum P(5) = 6.1e-42
Identities = 40/127 (31%), Positives = 70/127 (55%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L+S Y+ L + PEI+RV ++ L L + + + + +E
Sbjct: 960 RVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIE 1019
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P E++ +S L GA+ + E++T LG L+ LPVD+ +GK+++FG++F +D L
Sbjct: 1020 PPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALT 1079
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1080 IAASLAF 1086
Score = 165 (63.1 bits), Expect = 4.3e-84, Sum P(5) = 4.3e-84
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER DFLL V+K ++ +++IILMSAT+N ELF YF+ II +PGR
Sbjct: 658 VIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHS-CPIINIPGR 716
Query: 383 LYPI-QLEYHPIVELDRTKSEKLDPGPYIR 411
+P+ Q ++ + R E D PY R
Sbjct: 717 TFPVDQFFLEDVIAMTRYVLE--DSSPYRR 744
Score = 126 (49.4 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 1094 RLESMDANEVEFRLKHDPKQV---QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 1150
RLES+ ++ RL + V ++ D L +++DE+HER DFLL V+K +
Sbjct: 623 RLESVKSSAT--RLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDI 680
Query: 1151 LHSTAEVKIILMSATINIELFHTYFN 1176
+ +++IILMSAT+N ELF YF+
Sbjct: 681 MVQRPDLRIILMSATLNAELFSQYFH 706
Score = 110 (43.8 bits), Expect = 6.5e-35, Sum P(5) = 6.5e-35
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ GA+ + E++T LG L+ LPVD+ +GK+++FG++F +D L + +L F
Sbjct: 1035 DLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAF 1086
Score = 110 (43.8 bits), Expect = 6.5e-35, Sum P(5) = 6.5e-35
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ GA+ + E++T LG L+ LPVD+ +GK+++FG++F +D L + +L F
Sbjct: 1035 DLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAF 1086
Score = 110 (43.8 bits), Expect = 6.5e-35, Sum P(5) = 6.5e-35
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ GA+ + E++T LG L+ LPVD+ +GK+++FG++F +D L + +L F
Sbjct: 1035 DLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAF 1086
Score = 62 (26.9 bits), Expect = 2.2e-73, Sum P(5) = 2.2e-73
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L +++DE+HER DFLL V+K ++
Sbjct: 649 DLTLQGITHVIVDEVHERTEESDFLLLVLKDIM 681
Score = 57 (25.1 bits), Expect = 4.3e-84, Sum P(5) = 4.3e-84
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTN---SDFTRLVFDSWIEVFV 1329
LVY ++TS+ F+ +C + +LL +H +F + D WI FV
Sbjct: 1275 LVYHEKIKTSRVFIRDCSMVSVYPLVLLGGGQVHMQLQKGEFVISLDDGWIR-FV 1328
Score = 54 (24.1 bits), Expect = 1.5e-72, Sum P(5) = 1.5e-72
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DEVHER DFLL V+
Sbjct: 658 VIVDEVHERTEESDFLLLVL 677
Score = 51 (23.0 bits), Expect = 4.3e-84, Sum P(5) = 4.3e-84
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
+++V G Y + + G +E F K+ G+V +HP SV
Sbjct: 1219 VVQVKKPEGKYQKTSTG-AVKMQPKAEELKFVTKNDGYVHIHPSSV 1263
Score = 40 (19.1 bits), Expect = 3.2e-29, Sum P(5) = 3.2e-29
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 659 IVDEVHERTEESDFLLLV 676
Score = 39 (18.8 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 1322 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMD 1359
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 597 (215.2 bits), Expect = 4.6e-84, Sum P(4) = 4.6e-84
Identities = 151/439 (34%), Positives = 236/439 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E +D L Y V++LDE HER L D L+GV+K ++ +++K+++MSAT++ F Y
Sbjct: 177 EAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQY 236
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A ++KVPGR +P+++ Y P E D ++ I ++I GD+L
Sbjct: 237 FDN-APLMKVPGRTHPVEIFYTPEPERDYLEAA---------IRTVIQIHMCEEIEGDIL 286
Query: 430 IFMSGISEISSIV-RAAQEY-NEKSQ-GWI-VLPLHSTLSLEEQDRVFHYAP----EGL- 480
+F++G EI R +E N S+ G + +PL+STL Q R+F AP G
Sbjct: 287 MFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAI 346
Query: 481 -RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK +VSTNIAETS+TIDG+ FV+D G K+ Y+ ++ +L ISKASA+QR GRA
Sbjct: 347 GRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRA 406
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
GRT PG C+RLY+E+ + + +T PEI R ++ +++L L +G+ D+ F F++ P
Sbjct: 407 GRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAP 466
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E + ++ L A+D +T LG +S+ P+D L KML+ + + +LS+ A+
Sbjct: 467 ETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAM 526
Query: 659 LSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
LSV F + A+ GD LT+LN Y + K WC I
Sbjct: 527 LSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAF----KQSSEDPNWCYENFI 582
Query: 719 EEQRFYEVTKLRSQFKQVL 737
+ +R Q +++
Sbjct: 583 NFRSLKSADNVRQQLARIM 601
Score = 207 (77.9 bits), Expect = 4.6e-84, Sum P(4) = 4.6e-84
Identities = 44/121 (36%), Positives = 76/121 (62%)
Query: 23 EKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQ----YLVQA 78
+++ L K R +LPV +Y+ + + + + +++ G+TG GK+TQIPQ + V
Sbjct: 60 QRYQNLYKKRI---ALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSK 116
Query: 79 GFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
G + ++CTQPRR+A +S+++RV+ E + VGY IRFE KT + ++T+G+LLR
Sbjct: 117 GRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLR 176
Query: 139 Q 139
+
Sbjct: 177 E 177
Score = 168 (64.2 bits), Expect = 5.0e-28, Sum P(4) = 5.0e-28
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E+ + + +T PEI R ++ +++L L +G+ D+ F F++ P E
Sbjct: 408 RTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPE 467
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
+ ++ L A+D +T LG +S+ P+D L KML+ S H +L
Sbjct: 468 TLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLI-ASCQHNCSNEIL 521
Score = 132 (51.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
+ +D L Y V++LDE HER L D L+GV+K ++ +++K+++MSAT++ F Y
Sbjct: 177 EAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQY 236
Query: 1175 FNRIAKDLLSGST 1187
F+ + G T
Sbjct: 237 FDNAPLMKVPGRT 249
Score = 81 (33.6 bits), Expect = 4.6e-84, Sum P(4) = 4.6e-84
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y V++LDE HER L D L+GV+K
Sbjct: 180 SDPMLDQYQVILLDEAHERTLATDILMGVLK 210
Score = 79 (32.9 bits), Expect = 7.4e-84, Sum P(4) = 7.4e-84
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D L Y +++LDE HER L D L+GV+
Sbjct: 177 EAMSDPMLDQYQVILLDEAHERTLATDILMGVL 209
Score = 71 (30.1 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 920 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 972
M L+L LN+ A+D +T LG +S+ P+D L KML+ S H +L
Sbjct: 470 MRALEL-LNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLI-ASCQHNCSNEIL 521
Score = 71 (30.1 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 970 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 1022
M L+L LN+ A+D +T LG +S+ P+D L KML+ S H +L
Sbjct: 470 MRALEL-LNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLI-ASCQHNCSNEIL 521
Score = 71 (30.1 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 1020 MLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 1072
M L+L LN+ A+D +T LG +S+ P+D L KML+ S H +L
Sbjct: 470 MRALEL-LNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLI-ASCQHNCSNEIL 521
Score = 44 (20.5 bits), Expect = 4.6e-84, Sum P(4) = 4.6e-84
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 1186 STARSHKDVTI-LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTS 1244
ST + KD + ++ L G + QVA + T+K D V LHP +
Sbjct: 610 STEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIK-------DNQNVQLHPSTCLDH 662
Query: 1245 QPD 1247
+PD
Sbjct: 663 KPD 665
Score = 39 (18.8 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 37 SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQP 88
++ VAQ E +D L E V C + + +Y+ R A + P
Sbjct: 131 AMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDP 182
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 625 (225.1 bits), Expect = 7.0e-84, Sum P(4) = 7.0e-84
Identities = 149/441 (33%), Positives = 245/441 (55%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
LSSY L++DE HER +H D LL ++K L ++K+++ SAT+N E F +YF+ A I
Sbjct: 485 LSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDD-API 543
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR YP+ + Y P E + + I + I P+ GD+LIF++G
Sbjct: 544 FNIPGRRYPVDIYYTPAPEANYLSAA-------ITTVFQIHTTQPK---GDILIFLTGQD 593
Query: 437 EISS----IVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
EI + I A++ + + ++ P+++ L E Q ++F PE RK +++TNIAET
Sbjct: 594 EIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAET 653
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+TIDGI +V+D G VKE Y+ MS L S+ASA QR GRAGR GPG C+RLY+
Sbjct: 654 SLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYT 713
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + + E +TPEI+R +++ ++L L +G+ ++ F F++ PP E + ++ L
Sbjct: 714 KYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFAL 773
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP-FTNRAF 670
++ K +T LGR +++ P D L K ++ ++ VLS+ A+LS S F
Sbjct: 774 QGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKD 833
Query: 671 RDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFY--EV 726
+ + AR G D +T+LN + +WL + SK+ + ++R + R ++
Sbjct: 834 KQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQL 893
Query: 727 TKLRSQFKQVLGDSGLITDIP 747
+KL + + L G I+++P
Sbjct: 894 SKLCERVEVTLSTCGGISNMP 914
Score = 268 (99.4 bits), Expect = 7.0e-84, Sum P(4) = 7.0e-84
Identities = 54/134 (40%), Positives = 90/134 (67%)
Query: 10 KLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKST 69
+L L+ +D +K + S ++ET+ SLP+ Y+ E + + + ++++I G+TG GK+T
Sbjct: 349 QLYLQAQIDAAEKRQLS----MQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTT 404
Query: 70 QIPQYLVQAGF----QRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREK 125
Q+PQYL +AG+ R+ CTQPRR+A +S++ RVA E + N VGY IRFE + +K
Sbjct: 405 QLPQYLHEAGYTKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDK 464
Query: 126 TKIVFITEGLLLRQ 139
T + ++T+G+LLR+
Sbjct: 465 TILKYMTDGMLLRE 478
Score = 171 (65.3 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 33/102 (32%), Positives = 62/102 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R GPG C+RLY++ Y + + E +TPEI+R +++ ++L L +G+ ++ F F++ PP E
Sbjct: 702 RVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTE 761
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ ++ L ++ K +T LGR +++ P D L K ++
Sbjct: 762 ALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVL 803
Score = 134 (52.2 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
LSSY L++DE HER +H D LL ++K L ++K+++ SAT+N E F +YF+
Sbjct: 485 LSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFD 539
Score = 84 (34.6 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCL---------LHSTVEVAADNFLSSYD 321
LSSY L++DE HER +H D LL ++K L L S+ + A+ F S +D
Sbjct: 485 LSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFD 539
Score = 73 (30.8 bits), Expect = 7.0e-84, Sum P(4) = 7.0e-84
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
T+ LSSY L++DE HER ++ D LL ++
Sbjct: 481 TEPDLSSYSALMIDEAHERTVHTDILLALV 510
Score = 46 (21.3 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 932 IDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++ K +T LGR +++ P D L K ++
Sbjct: 776 LNHKGELTKLGRQMAEFPTDPMLAKAVL 803
Score = 46 (21.3 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 982 IDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++ K +T LGR +++ P D L K ++
Sbjct: 776 LNHKGELTKLGRQMAEFPTDPMLAKAVL 803
Score = 46 (21.3 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1032 IDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++ K +T LGR +++ P D L K ++
Sbjct: 776 LNHKGELTKLGRQMAEFPTDPMLAKAVL 803
Score = 44 (20.5 bits), Expect = 7.0e-84, Sum P(4) = 7.0e-84
Identities = 5/20 (25%), Positives = 16/20 (80%)
Query: 1276 QLLVYMSLLETSKPFLVNCL 1295
++++Y L++T+K ++ +C+
Sbjct: 963 RMVIYYELVQTTKEYMRSCM 982
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 677 (243.4 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 161/442 (36%), Positives = 248/442 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L YD +++DE HER L+ DFLLG +K LL ++KII+ SATI+ E F +
Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
FN A II+V GR YP+++ Y PIVE D T+ ++L I +D+ + GD+
Sbjct: 241 FNN-APIIEVSGRTYPVEVRYRPIVEEADDTERDQLQA-----IFDAVDE-LSQESHGDI 293
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
LIFMSG EI A + N + +LPL++ LS EQ+RVF + G R+ +++TN
Sbjct: 294 LIFMSGEREIRDTADALNKLNLRHTE--ILPLYARLSNSEQNRVFQ-SHSG-RRIVLATN 349
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
+AETS+T+ GI++V+D G + Y K+ L IS+ASA QRKGR GR G+C
Sbjct: 350 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICI 409
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLYSE+ + E++ PEI R ++ S++L + +GLGD+ FPF+EAP NI+ VR L
Sbjct: 410 RLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469
Query: 609 TQHGAIDSKE-----RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+ GAI + E ++T LGR LS LPVD L +M++ + + + + LS+Q
Sbjct: 470 EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQD 529
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS---KKWCKRRGIEE 720
P + + + D L +N + +LG ++ + S ++ C+ +
Sbjct: 530 PRERPMDKQQASDEKHRRFHDKESDFLAFVNLWN-YLGEQQKALSSNAFRRLCRTDYLNY 588
Query: 721 QRFYEVTKLRSQFKQVLGDSGL 742
R E + +Q +QV+ + G+
Sbjct: 589 LRVREWQDIYTQLRQVVKELGI 610
Score = 227 (85.0 bits), Expect = 5.1e-34, Sum P(4) = 5.1e-34
Identities = 51/134 (38%), Positives = 78/134 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+C RLYSE+ + E++ PEI R ++ S++L + +GLGD+ FPF+EAP N
Sbjct: 402 RVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRN 461
Query: 869 IESSVRSLTQHGAIDSKE-----RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
I+ VR L + GAI + E ++T LGR LS LPVD L +M++ + +++
Sbjct: 462 IQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMII 521
Query: 924 DLALNFGAIDSKER 937
AL+ D +ER
Sbjct: 522 TSALSIQ--DPRER 533
Score = 208 (78.3 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 40/107 (37%), Positives = 71/107 (66%)
Query: 36 NSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIA 92
++LPV+Q KQ+I++ + +VVI+AG+TG GK+TQ+P+ ++ G I TQPRR+A
Sbjct: 75 DNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLA 134
Query: 93 CISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+++ R+A E ++ +GY++RF H + T + +T+G+LL +
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAE 181
Score = 148 (57.2 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L YD +++DE HER L+ DFLLG +K LL ++KII+ SATI+ E F +
Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240
Query: 1175 FNRIAKDLLSGST 1187
FN +SG T
Sbjct: 241 FNNAPIIEVSGRT 253
Score = 92 (37.4 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ D L YD +++DE HER L+ DFLLG +K LL
Sbjct: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELL 217
Score = 85 (35.0 bits), Expect = 3.8e-83, Sum P(4) = 3.8e-83
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L YD +I+DE HER L DFLLG +
Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213
Score = 62 (26.9 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 934 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
S ++T LGR LS LPVD L +M++ + +++ AL+ D +ER
Sbjct: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ--DPRER 533
Score = 62 (26.9 bits), Expect = 1.7e-16, Sum P(4) = 1.7e-16
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 984 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
S ++T LGR LS LPVD L +M++ + +++ AL+ D +ER
Sbjct: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQ--DPRER 533
Score = 58 (25.5 bits), Expect = 4.2e-16, Sum P(4) = 4.2e-16
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 1034 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
S ++T LGR LS LPVD L +M++ + +++ AL+
Sbjct: 482 SAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALS 526
Score = 44 (20.5 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 957
L + F +D K + GR L DL D GK+
Sbjct: 969 LKITFRVVDDKNKKLKEGRSLQDLK-DALKGKV 1000
Score = 44 (20.5 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 1007
L + F +D K + GR L DL D GK+
Sbjct: 969 LKITFRVVDDKNKKLKEGRSLQDLK-DALKGKV 1000
Score = 44 (20.5 bits), Expect = 7.1e-84, Sum P(4) = 7.1e-84
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 1057
L + F +D K + GR L DL D GK+
Sbjct: 969 LKITFRVVDDKNKKLKEGRSLQDLK-DALKGKV 1000
Score = 38 (18.4 bits), Expect = 3.0e-83, Sum P(4) = 3.0e-83
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1332 QEAKSTADVNQLEH-SLTRDLV 1352
+ K A+V +LEH S RD++
Sbjct: 768 ENLKLRAEVEELEHKSRRRDIL 789
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 661 (237.7 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 151/434 (34%), Positives = 246/434 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y +++DE HER L+ D L G+++ ++ A++K+I+ SAT++ + F +
Sbjct: 545 ECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADF 604
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F +PGR +P++L +H RT E + ++I + GD+L
Sbjct: 605 FGGNCPTFTIPGRTFPVEL-FHA-----RTPVEDYVDAAVKQAVTI----HLGGMDGDIL 654
Query: 430 IFMSGISEISSIVRAAQE-YNEKSQG--WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVS 486
IFM G +I +E E + VLP++S L + Q ++F AP G+RK IV+
Sbjct: 655 IFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVA 714
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TNIAETS+T+DGI FV+D G K Y+ M L F +S+ASA QR GRAGRTGPG
Sbjct: 715 TNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQ 774
Query: 547 CYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
CYRLY+E Q+ L + + PEI+R ++ +++L L +G+ D+ KF F++APP +N+ +S+
Sbjct: 775 CYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSM 834
Query: 606 RSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
L GA+D+ ++T +GR + + P+D L KML+ + D VL++ ++LSV + F
Sbjct: 835 YQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIF 894
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
R+ + + +++ + D LT LN Y +W + S KWC + + +
Sbjct: 895 FRPKGREEEADAKKEKFQVPESDHLTFLNVYIQW----RTHKYSAKWCADNYLHVKALKK 950
Query: 726 VTKLRSQFKQVLGD 739
V ++R+Q K+++ D
Sbjct: 951 VREVRAQLKEIMQD 964
Score = 238 (88.8 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 52/121 (42%), Positives = 78/121 (64%)
Query: 25 FSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-- 82
F+ I++ + LPV +Q++++ + + VVII G+TG GK+TQ+ QYL++ GF
Sbjct: 428 FAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG 487
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDS 141
I CTQPRR+A +S+++RVA E VGY IRFE EKT I ++T+G+LLR+
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 142 G 142
G
Sbjct: 548 G 548
Score = 222 (83.2 bits), Expect = 5.7e-35, Sum P(3) = 5.7e-35
Identities = 47/125 (37%), Positives = 79/125 (63%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Q+ L + + PEI+R ++ +++L L +G+ D+ KF F++APP +
Sbjct: 769 RTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ ++T +GR + + P+D L KML+ + D +L + L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 928 NFGAI 932
+ AI
Sbjct: 889 SVPAI 893
Score = 112 (44.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L Y +++DE HER L+ D L G+++ ++ A++K+I+ SAT++ + F +F
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFF 605
Score = 72 (30.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ ++T +GR + + P+D L KML+ + D +L + L+ AI
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Score = 72 (30.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ ++T +GR + + P+D L KML+ + D +L + L+ AI
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Score = 69 (29.3 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y +++DE HER L+ D L G+++
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLLR 578
Score = 68 (29.0 bits), Expect = 2.1e-83, Sum P(3) = 2.1e-83
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y +I+DE HER L D L G++
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLL 577
Score = 68 (29.0 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA+D+ ++T +GR + + P+D L KML+ + D +L +
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTI 884
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 661 (237.7 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 151/434 (34%), Positives = 246/434 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y +++DE HER L+ D L G+++ ++ A++K+I+ SAT++ + F +
Sbjct: 545 ECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADF 604
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F +PGR +P++L +H RT E + ++I + GD+L
Sbjct: 605 FGGNCPTFTIPGRTFPVEL-FHA-----RTPVEDYVDAAVKQAVTI----HLGGMDGDIL 654
Query: 430 IFMSGISEISSIVRAAQE-YNEKSQG--WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVS 486
IFM G +I +E E + VLP++S L + Q ++F AP G+RK IV+
Sbjct: 655 IFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVA 714
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TNIAETS+T+DGI FV+D G K Y+ M L F +S+ASA QR GRAGRTGPG
Sbjct: 715 TNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQ 774
Query: 547 CYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
CYRLY+E Q+ L + + PEI+R ++ +++L L +G+ D+ KF F++APP +N+ +S+
Sbjct: 775 CYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSM 834
Query: 606 RSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
L GA+D+ ++T +GR + + P+D L KML+ + D VL++ ++LSV + F
Sbjct: 835 YQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIF 894
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
R+ + + +++ + D LT LN Y +W + S KWC + + +
Sbjct: 895 FRPKGREEEADAKKEKFQVPESDHLTFLNVYIQW----RTHKYSAKWCADNYLHVKALKK 950
Query: 726 VTKLRSQFKQVLGD 739
V ++R+Q K+++ D
Sbjct: 951 VREVRAQLKEIMQD 964
Score = 238 (88.8 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 52/121 (42%), Positives = 78/121 (64%)
Query: 25 FSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-- 82
F+ I++ + LPV +Q++++ + + VVII G+TG GK+TQ+ QYL++ GF
Sbjct: 428 FAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG 487
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDS 141
I CTQPRR+A +S+++RVA E VGY IRFE EKT I ++T+G+LLR+
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 142 G 142
G
Sbjct: 548 G 548
Score = 222 (83.2 bits), Expect = 5.7e-35, Sum P(3) = 5.7e-35
Identities = 47/125 (37%), Positives = 79/125 (63%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Q+ L + + PEI+R ++ +++L L +G+ D+ KF F++APP +
Sbjct: 769 RTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ ++T +GR + + P+D L KML+ + D +L + L
Sbjct: 829 NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSML 888
Query: 928 NFGAI 932
+ AI
Sbjct: 889 SVPAI 893
Score = 112 (44.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L Y +++DE HER L+ D L G+++ ++ A++K+I+ SAT++ + F +F
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFF 605
Score = 72 (30.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ ++T +GR + + P+D L KML+ + D +L + L+ AI
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Score = 72 (30.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ ++T +GR + + P+D L KML+ + D +L + L+ AI
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Score = 69 (29.3 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y +++DE HER L+ D L G+++
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLLR 578
Score = 68 (29.0 bits), Expect = 2.1e-83, Sum P(3) = 2.1e-83
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y +I+DE HER L D L G++
Sbjct: 549 DGSLDQYSAIIMDEAHERSLNTDVLFGLL 577
Score = 68 (29.0 bits), Expect = 4.6e-19, Sum P(3) = 4.6e-19
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA+D+ ++T +GR + + P+D L KML+ + D +L +
Sbjct: 841 GALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTI 884
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 646 (232.5 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 669 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 728
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 729 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 777
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 778 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 836
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 837 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 896
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 897 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 956
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 957 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1016
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1017 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1072
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1073 RRAQDIR---KQMLG 1084
Score = 248 (92.4 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 530 MMPNDIPEWKK--HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVI 587
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 588 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 647
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 648 FEDCTSPETVIKYMTDGMLLRE 669
Score = 210 (79.0 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 952
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 953 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 115 (45.5 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 729
Score = 77 (32.2 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 676 LTQYAIIMLDEAHERTIHTDVLFGLLK 702
Score = 69 (29.3 bits), Expect = 1.4e-82, Sum P(3) = 1.4e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 701
Score = 62 (26.9 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 62 (26.9 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 62 (26.9 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 646 (232.5 bits), Expect = 2.6e-83, Sum P(3) = 2.6e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 638 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 697
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 698 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 746
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 747 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 805
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 806 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 865
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 866 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 925
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 926 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 985
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 986 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1041
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1042 RRAQDIR---KQMLG 1053
Score = 248 (92.4 bits), Expect = 2.6e-83, Sum P(3) = 2.6e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 499 MMPNDIPEWKK--HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVI 556
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 557 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 616
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 617 FEDCTSPETVIKYMTDGMLLRE 638
Score = 210 (79.0 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 862 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 921
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 922 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 963
Score = 115 (45.5 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 642 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 698
Score = 77 (32.2 bits), Expect = 2.6e-83, Sum P(3) = 2.6e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 645 LTQYAIIMLDEAHERTIHTDVLFGLLK 671
Score = 69 (29.3 bits), Expect = 1.8e-82, Sum P(3) = 1.8e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 642 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 670
Score = 62 (26.9 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 920 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 963
Score = 62 (26.9 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 920 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 963
Score = 62 (26.9 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 920 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 963
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 558 (201.5 bits), Expect = 2.8e-83, Sum P(4) = 2.8e-83
Identities = 125/346 (36%), Positives = 200/346 (57%)
Query: 424 ERGDVLIFMSGISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
E G +L+F+ G IS++ + KS +I++PLHS + Q +VF P G+RK
Sbjct: 468 EDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRK 527
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
+++TNIAETSITID + FV+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR
Sbjct: 528 IVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRV 587
Query: 543 GPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAEN 600
PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P +
Sbjct: 588 QPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDA 647
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
+ ++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS
Sbjct: 648 VMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS 707
Query: 661 VQSPFTNRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGI 718
+ PF ++ + RKEL N D LTV+NA+ W ++ R++K +C +
Sbjct: 708 FKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFL 767
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGLIT--DIPGPDASLSS-RERALR 761
+ ++ QF + L +G + D P ++ +S E+ L+
Sbjct: 768 SPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKSNTNSDNEKLLK 813
Score = 200 (75.5 bits), Expect = 2.8e-83, Sum P(4) = 2.8e-83
Identities = 46/129 (35%), Positives = 76/129 (58%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
K ++ + + RE S + Q KQE+++ + RV +I+G+TGCGK+TQ+ Q+++
Sbjct: 171 KSDPRYIEMQRFREKLPSYGMRQ-KQELVNLINNNRVTVISGETGCGKTTQVTQFILDDY 229
Query: 80 FQR-------IACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTKIV 129
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++ I+
Sbjct: 230 IERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSIL 289
Query: 130 FITEGLLLR 138
+ T G++L+
Sbjct: 290 YCTTGIVLQ 298
Score = 197 (74.4 bits), Expect = 9.2e-43, Sum P(4) = 9.2e-43
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 586 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSR 645
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + ++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 646 DAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 705
Query: 927 LNF 929
L+F
Sbjct: 706 LSF 708
Score = 181 (68.8 bits), Expect = 2.8e-83, Sum P(4) = 2.8e-83
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 313 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 372
+D LSS +VLDEIHER+L D L+ +IK LL+ ++K+ILMSAT+N E F YF+
Sbjct: 302 SDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDN 361
Query: 373 IAKIIKVPGRLYPIQLEY--HPIVELDRTKSEKLDPGP 408
+I +PG +P+ +EY ++E R E D P
Sbjct: 362 -CPMIHIPGFTFPV-VEYLLEDVIEKLRYTPENTDRRP 397
Score = 152 (58.6 bits), Expect = 2.7e-24, Sum P(3) = 2.7e-24
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D LSS +VLDEIHER+L D L+ +IK LL+ ++K+ILMSAT+N E F YF+
Sbjct: 302 SDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDN 361
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 362 CPMIHIPGFT 371
Score = 110 (43.8 bits), Expect = 8.5e-34, Sum P(4) = 8.5e-34
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 920 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
ML ++ + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 649 MLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 708
Score = 110 (43.8 bits), Expect = 8.5e-34, Sum P(4) = 8.5e-34
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 970 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
ML ++ + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 649 MLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 708
Score = 110 (43.8 bits), Expect = 8.5e-34, Sum P(4) = 8.5e-34
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 1020 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
ML ++ + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 649 MLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 708
Score = 94 (38.1 bits), Expect = 3.4e-74, Sum P(4) = 3.4e-74
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 263 LHCGGEIVA----ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLS 318
L+C IV +D LSS +VLDEIHER+L D L+ +IK LL+ +++ +
Sbjct: 289 LYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSA 348
Query: 319 SYDVLVLDEIHER----HLHGDFLLGVIKCLLHSTAE 351
+ + E + H+ G F V++ LL E
Sbjct: 349 TLNAEKFSEYFDNCPMIHIPG-FTFPVVEYLLEDVIE 384
Score = 79 (32.9 bits), Expect = 1.2e-72, Sum P(4) = 1.2e-72
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGE--IVAADYFLSSYDVL-VLDE 286
+D LSS ++LDE+HER+L D L+ +I L+ + ++ L++ D
Sbjct: 302 SDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDN 361
Query: 287 IHERHLHGDFLLGVIKCLLHSTVE 310
H+ G F V++ LL +E
Sbjct: 362 CPMIHIPG-FTFPVVEYLLEDVIE 384
Score = 73 (30.8 bits), Expect = 2.8e-83, Sum P(4) = 2.8e-83
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFV 1234
+R KD S + + + K +LK ++ +GLYP+VA I F+ + + K G V
Sbjct: 794 SRDPKDPKSNTNSDNEK---LLKAVICAGLYPKVAKIRPSFSKKRKMVKVC--TKTDGTV 848
Query: 1235 SLHPFSV 1241
++HP SV
Sbjct: 849 NIHPKSV 855
Score = 43 (20.2 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLF 1306
LPG + IS+ H LL+ + ++ + F++ L MP + +F
Sbjct: 476 LPGWDNISTLHDLLMSQVMFKSDR-FIIIPLHSLMPTVNQTQVF 518
Score = 39 (18.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 289 ERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVL 325
E H+ L G + C L + +AA LS D V+
Sbjct: 680 EPHIGKMILFGALFCCLDPVLTIAAS--LSFKDPFVI 714
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 646 (232.5 bits), Expect = 2.8e-83, Sum P(3) = 2.8e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 669 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 728
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 729 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 777
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 778 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 836
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 837 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 896
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 897 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 956
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 957 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1016
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1017 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1072
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1073 RRAQDIR---KQMLG 1084
Score = 248 (92.4 bits), Expect = 2.8e-83, Sum P(3) = 2.8e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 530 MMPNDIPEWKK--HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVI 587
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 588 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 647
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 648 FEDCTSPETVIKYMTDGMLLRE 669
Score = 210 (79.0 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 952
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 953 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 115 (45.5 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 729
Score = 77 (32.2 bits), Expect = 2.8e-83, Sum P(3) = 2.8e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 676 LTQYAIIMLDEAHERTIHTDVLFGLLK 702
Score = 69 (29.3 bits), Expect = 2.0e-82, Sum P(3) = 2.0e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 701
Score = 62 (26.9 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 62 (26.9 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
Score = 62 (26.9 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 951 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 994
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 646 (232.5 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 661 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 720
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 721 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 769
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 770 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 828
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 829 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 888
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 889 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 948
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 949 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1008
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1009 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1064
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1065 RRAQDIR---KQMLG 1076
Score = 247 (92.0 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 522 MMPNDIPEWKK--HAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVI 579
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 580 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 639
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 640 FEDCTSPETVIKYMTDGMLLRE 661
Score = 210 (79.0 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 885 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 944
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 945 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 986
Score = 115 (45.5 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 665 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 721
Score = 77 (32.2 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 668 LTQYAIIMLDEAHERTIHTDVLFGLLK 694
Score = 69 (29.3 bits), Expect = 2.3e-82, Sum P(3) = 2.3e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 665 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 693
Score = 62 (26.9 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 943 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 986
Score = 62 (26.9 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 943 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 986
Score = 62 (26.9 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 943 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 986
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 646 (232.5 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 691 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 750
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 751 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 799
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 800 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 858
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 859 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 918
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 919 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 978
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 979 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1038
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1039 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1094
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1095 RRAQDIR---KQMLG 1106
Score = 248 (92.4 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 552 MMPNDIPEWKK--HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVI 609
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 610 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 669
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 670 FEDCTSPETVIKYMTDGMLLRE 691
Score = 210 (79.0 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 915 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 974
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 975 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1016
Score = 115 (45.5 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 695 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 751
Score = 77 (32.2 bits), Expect = 3.4e-83, Sum P(3) = 3.4e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 698 LTQYAIIMLDEAHERTIHTDVLFGLLK 724
Score = 69 (29.3 bits), Expect = 2.4e-82, Sum P(3) = 2.4e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 695 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 723
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 973 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1016
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 973 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1016
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 973 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1016
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 646 (232.5 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 693 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 752
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 753 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 801
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 802 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 860
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 861 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 920
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 921 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 980
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 981 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1040
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1041 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1096
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1097 RRAQDIR---KQMLG 1108
Score = 248 (92.4 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 554 MMPNDIPEWKK--HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVI 611
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 612 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 671
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 672 FEDCTSPETVIKYMTDGMLLRE 693
Score = 210 (79.0 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 917 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 976
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 977 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1018
Score = 115 (45.5 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 697 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 753
Score = 77 (32.2 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 700 LTQYAIIMLDEAHERTIHTDVLFGLLK 726
Score = 69 (29.3 bits), Expect = 2.4e-82, Sum P(3) = 2.4e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 697 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 725
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 975 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1018
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 975 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1018
Score = 62 (26.9 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 975 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1018
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 646 (232.5 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 665 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 724
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 725 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 773
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 774 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 832
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 833 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 892
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 893 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 952
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 953 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1012
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1013 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1068
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1069 RRAQDIR---KQMLG 1080
Score = 247 (92.0 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 526 MMPNDIPEWKK--HAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVI 583
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 584 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 643
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 644 FEDCTSPETVIKYMTDGMLLRE 665
Score = 210 (79.0 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 889 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 948
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 949 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 990
Score = 115 (45.5 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 669 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 725
Score = 77 (32.2 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 672 LTQYAIIMLDEAHERTIHTDVLFGLLK 698
Score = 69 (29.3 bits), Expect = 2.4e-82, Sum P(3) = 2.4e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 669 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 697
Score = 62 (26.9 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 947 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 990
Score = 62 (26.9 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 947 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 990
Score = 62 (26.9 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 947 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 990
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 646 (232.5 bits), Expect = 3.6e-83, Sum P(3) = 3.6e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 617 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 676
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 677 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 725
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 726 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 784
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 785 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 844
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 845 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 904
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 905 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 964
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 965 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1020
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1021 RRAQDIR---KQMLG 1032
Score = 245 (91.3 bits), Expect = 3.6e-83, Sum P(3) = 3.6e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T + I E + SLP+ + K+++I V +++I+
Sbjct: 478 MMPNDIPEWKK--HAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI 535
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 536 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 595
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 596 FEDCTSPETVIKYMTDGMLLRE 617
Score = 210 (79.0 bits), Expect = 3.0e-35, Sum P(3) = 3.0e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 841 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 900
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 901 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 942
Score = 115 (45.5 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 621 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 677
Score = 77 (32.2 bits), Expect = 3.6e-83, Sum P(3) = 3.6e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 624 LTQYAIIMLDEAHERTIHTDVLFGLLK 650
Score = 69 (29.3 bits), Expect = 2.5e-82, Sum P(3) = 2.5e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 621 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 649
Score = 62 (26.9 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 899 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 942
Score = 62 (26.9 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 899 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 942
Score = 62 (26.9 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 899 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 942
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 646 (232.5 bits), Expect = 3.9e-83, Sum P(3) = 3.9e-83
Identities = 158/435 (36%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 679 ECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQY 738
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 739 FYE-APIFTIPGRTYPVEILYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 787
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 788 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 846
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 847 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 906
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 907 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 966
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 967 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1026
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1027 VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1082
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1083 RRAQDIR---KQMLG 1094
Score = 247 (92.0 bits), Expect = 3.9e-83, Sum P(3) = 3.9e-83
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T M I E + SLP+ + K++++ V +++I+
Sbjct: 540 MMPNDIPEWKK--HAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVI 597
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 598 GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR 657
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 658 FEDCTSPETVIKYMTDGMLLRE 679
Score = 210 (79.0 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 903 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 962
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 963 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1004
Score = 115 (45.5 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L+ Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 683 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 739
Score = 77 (32.2 bits), Expect = 3.9e-83, Sum P(3) = 3.9e-83
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+ Y +++LDE HER +H D L G++K
Sbjct: 686 LTQYAIIMLDEAHERTIHTDVLFGLLK 712
Score = 69 (29.3 bits), Expect = 2.7e-82, Sum P(3) = 2.7e-82
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ Y I++LDE HER ++ D L G++
Sbjct: 683 DPDLTQYAIIMLDEAHERTIHTDVLFGLL 711
Score = 62 (26.9 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 961 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1004
Score = 62 (26.9 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 961 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1004
Score = 62 (26.9 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 961 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 1004
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 629 (226.5 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 152/436 (34%), Positives = 236/436 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D LS Y V++LDE HER +H D L G++K L+ ++++I+ SAT++ E F Y
Sbjct: 619 EILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGY 678
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F I +PGR +P+++ Y E D LD I +L I + GD+L
Sbjct: 679 FFN-CNIFTIPGRTFPVEILYTKQPETDY-----LDAA-LITVLQI----HLTEPEGDIL 727
Query: 430 IFMSGISEISSIVRAAQEYNEKSQGW-------IVLPLHSTLSLEEQDRVFHYAPEGLRK 482
+F++G EI S A Q E+ +G I+LP++S L E Q R+F P G RK
Sbjct: 728 VFLTGQEEIDS---ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 784
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
+V+TNIAE S+TIDGI +VVD G K+ Y+ + +L IS+ASA+QR GRAGRT
Sbjct: 785 VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 844
Query: 543 GPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENI 601
GPG CYRLY+E Y + + S PEI+R+++ L++ MG+ D+ F F++ P + +
Sbjct: 845 GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 904
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
S++ L GA+D + +T LGR +++ P++ PL KML+ D +L++ A++
Sbjct: 905 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT 964
Query: 662 QSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
+ F + + R + GD LT+L Y+ W K + S WC I+ +
Sbjct: 965 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW----KAKNFSGPWCFENFIQSR 1020
Query: 722 RFYEVTKLRSQFKQVL 737
+R Q ++
Sbjct: 1021 SLRRAQDVRKQLLSIM 1036
Score = 251 (93.4 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 54/124 (43%), Positives = 81/124 (65%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F Q+ K S I+E + SLP+ + K+E+I V +V+++ G+TG GK+TQ+ QYL +A
Sbjct: 500 FGQRSKLS----IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 555
Query: 79 GFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
G+ +I CTQPRR+A +S++KRVA E + VGY IRFE T I ++T+G+
Sbjct: 556 GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGM 615
Query: 136 LLRQ 139
LLR+
Sbjct: 616 LLRE 619
Score = 202 (76.2 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 44/130 (33%), Positives = 74/130 (56%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + S PEI+R+++ L++ MG+ D+ F F++ P +
Sbjct: 843 RTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQ 902
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ S++ L GA+D + +T LGR +++ P++ PL KML+ D +L + +
Sbjct: 903 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMI 962
Query: 928 NFGAIDSKER 937
G I + R
Sbjct: 963 QTGNIFYRPR 972
Score = 133 (51.9 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D LS Y V++LDE HER +H D L G++K L+ ++++I+ SAT++ E F Y
Sbjct: 619 EILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGY 678
Query: 1175 F 1175
F
Sbjct: 679 F 679
Score = 89 (36.4 bits), Expect = 4.1e-83, Sum P(3) = 4.1e-83
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+ D LS Y V++LDE HER +H D L G++K L+ +++
Sbjct: 620 ILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDL 661
Score = 78 (32.5 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D LS Y +++LDE HER ++ D L G++
Sbjct: 619 EILIDENLSQYSVIMLDEAHERTIHTDVLFGLL 651
Score = 73 (30.8 bits), Expect = 5.8e-23, Sum P(3) = 5.8e-23
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
+ GA+D + +T LGR +++ P++ PL KML+ D +L + + G I + R
Sbjct: 913 SLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPR 972
Score = 73 (30.8 bits), Expect = 5.8e-23, Sum P(3) = 5.8e-23
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
+ GA+D + +T LGR +++ P++ PL KML+ D +L + + G I + R
Sbjct: 913 SLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPR 972
Score = 72 (30.4 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+ GA+D + +T LGR +++ P++ PL KML+
Sbjct: 913 SLGALDEEGLLTKLGRKMAEFPLEPPLSKMLL 944
Score = 52 (23.4 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 667 NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRV-RSKKWCKRR--GIEEQR 722
NR + DP ET + L G L+ + EW KKD ++ + +R I+EQR
Sbjct: 457 NRPWEDPMPETGERHLAQELRGVGLSAYDM-PEW---KKDAFGKTPTFGQRSKLSIQEQR 512
Query: 723 -FYEVTKLRSQFKQVLGDSGLITDI 746
+ KL+ + Q + D+ ++ I
Sbjct: 513 ESLPIYKLKKELIQAVHDNQVLVVI 537
Score = 44 (20.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 364 ELFHTYFNRIAKII---------KVPGRLYPIQLEYHPIVELDRTKS-EKLDPGPYIRIL 413
EL+ Y R+ +++ K G+ + + +D+ K K D Y++++
Sbjct: 212 ELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKRDMEVYVKVI 271
Query: 414 SIIDKKYPRTERGDV 428
SI KY + R DV
Sbjct: 272 SISSDKYSLSMR-DV 285
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 676 (243.0 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 157/449 (34%), Positives = 255/449 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D FL+ YD +++DE HER L+ DF+LG +K LL ++K+I+ SATI+ E F +
Sbjct: 191 EIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKH 250
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLD-PGPYIRILSIIDKKYPRTERGDV 428
F+ A II+V GR YP+++ Y P+ D ++S++ G + + + D+ GD+
Sbjct: 251 FSN-APIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGL-----GDI 304
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
LIFM+G EI A + N + ++PL++ LS EQ+++F P R+ +++TN
Sbjct: 305 LIFMNGEREIRDTADALSKRNLRDTE--IVPLYARLSAGEQNKIFQ--PHAGRRIVLATN 360
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
+AETS+T+ GI++V+D G + Y K+ L IS+ASA QRKGR GRT G+C
Sbjct: 361 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI 420
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLYSEE + E++ PEI R ++ S++L + +GLGD+ FPF+EAP NI+ VR L
Sbjct: 421 RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480
Query: 609 TQHGAI-----DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+ GAI D K+R+T G+ L+ LP+D L +M++ S + V+ +A+ LS+Q
Sbjct: 481 EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD 540
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKW---CKRRGIEE 720
P + + + + D LT++N + ++G ++ + S ++ CK +
Sbjct: 541 PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLW-HYIGQQQKALTSNQFRRQCKLDYLNY 599
Query: 721 QRFYEVTKLRSQFKQVLGDSGL-ITDIPG 748
R E + +Q Q + G + D PG
Sbjct: 600 LRVREWQDVYTQLHQSTREMGFKLNDEPG 628
Score = 235 (87.8 bits), Expect = 3.1e-34, Sum P(4) = 3.1e-34
Identities = 52/134 (38%), Positives = 81/134 (60%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT G+C RLYSEE + E++ PEI R ++ S++L + +GLGD+ FPF+EAP N
Sbjct: 413 RTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRN 472
Query: 869 IESSVRSLTQHGAI-----DSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
I+ VR L + GAI D K+R+T G+ L+ LP+D L +M++ S + ++++
Sbjct: 473 IQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMII 532
Query: 924 DLALNFGAIDSKER 937
AL+ D +ER
Sbjct: 533 ASALSIQ--DPRER 544
Score = 202 (76.2 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 47/140 (33%), Positives = 86/140 (61%)
Query: 4 ALYEEWKL-LLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
A+++E L + ++ + +Q+++ + KI E LPV+Q + +I + +VVI+AG+
Sbjct: 55 AVFDEIALDIAQSMMVVEQRKQ--QMPKI-EYPALLPVSQKRDDIAQAIAHHQVVIVAGE 111
Query: 63 TGCGKSTQIPQYLVQAG---FQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
TG GK+TQ+P+ + G + I TQPRR+A S++ R+A E ++ VGY++RF
Sbjct: 112 TGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFT 171
Query: 120 KHRREKTKIVFITEGLLLRQ 139
++T+I +T+G+LL +
Sbjct: 172 DQISDQTQIKLMTDGILLAE 191
Score = 149 (57.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/95 (34%), Positives = 56/95 (58%)
Query: 1094 RLESMDANEVEFRLKHDPKQV-QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R +++ + +L D + ++ D FL+ YD +++DE HER L+ DF+LG +K LL
Sbjct: 169 RFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLP 228
Query: 1153 STAEVKIILMSATINIELFHTYFNRIAKDLLSGST 1187
++K+I+ SATI+ E F +F+ +SG T
Sbjct: 229 RRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRT 263
Score = 98 (39.6 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D FL+ YD +++DE HER L+ DF+LG +K LL
Sbjct: 195 DRFLNQYDTIIIDEAHERSLNIDFILGYLKQLL 227
Score = 92 (37.4 bits), Expect = 1.8e-82, Sum P(4) = 1.8e-82
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D FL+ YD +I+DE HER L DF+LG +
Sbjct: 191 EIQNDRFLNQYDTIIIDEAHERSLNIDFILGYL 223
Score = 72 (30.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 921 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSI 538
Query: 980 GAIDSKER 987
D +ER
Sbjct: 539 Q--DPRER 544
Score = 72 (30.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 971 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSI 538
Query: 1030 GAIDSKER 1037
D +ER
Sbjct: 539 Q--DPRER 544
Score = 68 (29.0 bits), Expect = 4.5e-17, Sum P(4) = 4.5e-17
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 1021 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALS 537
Score = 46 (21.3 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 28/126 (22%), Positives = 51/126 (40%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA---EVK----II 355
C LH E + + + D+I +R LH + G + + EV+ ++
Sbjct: 998 CDLHELKESLKEKVQETLSQVADDDIEQRDLH-TWSFGELPKVYQQKRGGFEVRAYPALV 1056
Query: 356 LMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPG----PYIR 411
++ I+LF T +++ + RL + + PI L K G PY +
Sbjct: 1057 DKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVP-SPIKYLHANLPNKSKLGLYFNPYGK 1115
Query: 412 ILSIID 417
+L +ID
Sbjct: 1116 VLDLID 1121
Score = 38 (18.4 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1169 ELFHTYFNRIAKDLLSG 1185
ELF Y R+ +++SG
Sbjct: 805 ELFQFYDQRVGTEVVSG 821
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 676 (243.0 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 157/449 (34%), Positives = 255/449 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D FL+ YD +++DE HER L+ DF+LG +K LL ++K+I+ SATI+ E F +
Sbjct: 191 EIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKH 250
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLD-PGPYIRILSIIDKKYPRTERGDV 428
F+ A II+V GR YP+++ Y P+ D ++S++ G + + + D+ GD+
Sbjct: 251 FSN-APIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGL-----GDI 304
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
LIFM+G EI A + N + ++PL++ LS EQ+++F P R+ +++TN
Sbjct: 305 LIFMNGEREIRDTADALSKRNLRDTE--IVPLYARLSAGEQNKIFQ--PHAGRRIVLATN 360
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
+AETS+T+ GI++V+D G + Y K+ L IS+ASA QRKGR GRT G+C
Sbjct: 361 VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI 420
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLYSEE + E++ PEI R ++ S++L + +GLGD+ FPF+EAP NI+ VR L
Sbjct: 421 RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL 480
Query: 609 TQHGAI-----DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+ GAI D K+R+T G+ L+ LP+D L +M++ S + V+ +A+ LS+Q
Sbjct: 481 EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD 540
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKW---CKRRGIEE 720
P + + + + D LT++N + ++G ++ + S ++ CK +
Sbjct: 541 PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLW-HYIGQQQKALTSNQFRRQCKLDYLNY 599
Query: 721 QRFYEVTKLRSQFKQVLGDSGL-ITDIPG 748
R E + +Q Q + G + D PG
Sbjct: 600 LRVREWQDVYTQLHQSTREMGFKLNDEPG 628
Score = 235 (87.8 bits), Expect = 3.1e-34, Sum P(4) = 3.1e-34
Identities = 52/134 (38%), Positives = 81/134 (60%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT G+C RLYSEE + E++ PEI R ++ S++L + +GLGD+ FPF+EAP N
Sbjct: 413 RTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRN 472
Query: 869 IESSVRSLTQHGAI-----DSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
I+ VR L + GAI D K+R+T G+ L+ LP+D L +M++ S + ++++
Sbjct: 473 IQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMII 532
Query: 924 DLALNFGAIDSKER 937
AL+ D +ER
Sbjct: 533 ASALSIQ--DPRER 544
Score = 202 (76.2 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 47/140 (33%), Positives = 86/140 (61%)
Query: 4 ALYEEWKL-LLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
A+++E L + ++ + +Q+++ + KI E LPV+Q + +I + +VVI+AG+
Sbjct: 55 AVFDEIALDIAQSMMVVEQRKQ--QMPKI-EYPALLPVSQKRDDIAQAIAHHQVVIVAGE 111
Query: 63 TGCGKSTQIPQYLVQAG---FQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
TG GK+TQ+P+ + G + I TQPRR+A S++ R+A E ++ VGY++RF
Sbjct: 112 TGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFT 171
Query: 120 KHRREKTKIVFITEGLLLRQ 139
++T+I +T+G+LL +
Sbjct: 172 DQISDQTQIKLMTDGILLAE 191
Score = 149 (57.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/95 (34%), Positives = 56/95 (58%)
Query: 1094 RLESMDANEVEFRLKHDPKQV-QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R +++ + +L D + ++ D FL+ YD +++DE HER L+ DF+LG +K LL
Sbjct: 169 RFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLP 228
Query: 1153 STAEVKIILMSATINIELFHTYFNRIAKDLLSGST 1187
++K+I+ SATI+ E F +F+ +SG T
Sbjct: 229 RRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRT 263
Score = 98 (39.6 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D FL+ YD +++DE HER L+ DF+LG +K LL
Sbjct: 195 DRFLNQYDTIIIDEAHERSLNIDFILGYLKQLL 227
Score = 92 (37.4 bits), Expect = 1.8e-82, Sum P(4) = 1.8e-82
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D FL+ YD +I+DE HER L DF+LG +
Sbjct: 191 EIQNDRFLNQYDTIIIDEAHERSLNIDFILGYL 223
Score = 72 (30.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 921 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSI 538
Query: 980 GAIDSKER 987
D +ER
Sbjct: 539 Q--DPRER 544
Score = 72 (30.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 971 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSI 538
Query: 1030 GAIDSKER 1037
D +ER
Sbjct: 539 Q--DPRER 544
Score = 68 (29.0 bits), Expect = 4.5e-17, Sum P(4) = 4.5e-17
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 1021 LLLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
LL +L A+N D K+R+T G+ L+ LP+D L +M++ S + ++++ AL+
Sbjct: 479 LLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALS 537
Score = 46 (21.3 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 28/126 (22%), Positives = 51/126 (40%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA---EVK----II 355
C LH E + + + D+I +R LH + G + + EV+ ++
Sbjct: 998 CDLHELKESLKEKVQETLSQVADDDIEQRDLH-TWSFGELPKVYQQKRGGFEVRAYPALV 1056
Query: 356 LMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPG----PYIR 411
++ I+LF T +++ + RL + + PI L K G PY +
Sbjct: 1057 DKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVP-SPIKYLHANLPNKSKLGLYFNPYGK 1115
Query: 412 ILSIID 417
+L +ID
Sbjct: 1116 VLDLID 1121
Score = 38 (18.4 bits), Expect = 4.3e-83, Sum P(4) = 4.3e-83
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 1169 ELFHTYFNRIAKDLLSG 1185
ELF Y R+ +++SG
Sbjct: 805 ELFQFYDQRVGTEVVSG 821
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 588 (212.0 bits), Expect = 4.7e-83, Sum P(3) = 4.7e-83
Identities = 140/436 (32%), Positives = 233/436 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ AD LS Y ++++DE HER + D LLG+++ ++ +++II+ SAT++ ELF +
Sbjct: 182 EILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDF 241
Query: 370 F--NRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRTERG 426
F N K + ++ HP+ + TK+ D Y + + + + G
Sbjct: 242 FEMNETGNSDKDTAGIISVEGRTHPVA-VHHTKTSVPD---YCQSAVDTVINIHKHENPG 297
Query: 427 DVLIFMSGISEISSIVRAAQEY--NEKS--QGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
D+L+F++G E+ + +E N K+ + W+V P + L EQ + F P G RK
Sbjct: 298 DILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVV-PCYGALPAREQMKAFDSTPHGTRK 356
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
+V+TNIAE SITI GI +V+D+G VK + + TL +SKASAEQR GRAGR
Sbjct: 357 VVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRI 416
Query: 543 GPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIE 602
PG CYRLY E ++ AE + PEI+R + S +L L +G+ +V +F +L PP+ +
Sbjct: 417 RPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMI 476
Query: 603 SSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
+ + L GAID ++TS LG +++ P+ K L+ + F ++++ A++ +
Sbjct: 477 NGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQI 536
Query: 662 QSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
Q F + + RK+ GD +T+LN + +++ + RSKKWC + +
Sbjct: 537 QDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFV----ENGRSKKWCSDHFVNYR 592
Query: 722 RFYEVTKLRSQFKQVL 737
+RSQ ++L
Sbjct: 593 GLMRADNVRSQLVRLL 608
Score = 228 (85.3 bits), Expect = 4.7e-83, Sum P(3) = 4.7e-83
Identities = 47/115 (40%), Positives = 77/115 (66%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIA 84
+ I++ + LP+ + + I+ + R +II G+TGCGKSTQ+PQ+L++AG+ ++I
Sbjct: 68 LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIV 127
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
TQPRR+A ++L+ RVA E + VGY +RF+ + TK+ F+T+GLLLR+
Sbjct: 128 ITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLRE 182
Score = 158 (60.7 bits), Expect = 1.5e-29, Sum P(3) = 1.5e-29
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG CYRLY E ++ AE + PEI+R + S +L L +G+ +V +F +L PP+
Sbjct: 415 RIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWA 474
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ + + L GAID ++T+ LG +++ P+ K L+ + F
Sbjct: 475 MINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
Score = 131 (51.2 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ AD LS Y ++++DE HER + D LLG+++ ++ +++II+ SAT++ ELF +
Sbjct: 182 EILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDF 241
Query: 1175 F 1175
F
Sbjct: 242 F 242
Score = 83 (34.3 bits), Expect = 4.7e-83, Sum P(3) = 4.7e-83
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ AD LS Y ++++DE HER + D LLG+++ ++
Sbjct: 183 ILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKII 218
Score = 48 (22.0 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 24/125 (19%), Positives = 52/125 (41%)
Query: 1023 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLV----FGSMFHQIDTMLLLDLAL 1077
L+L GAID ++TS LG +++ P+ K L+ FG + + ++ +
Sbjct: 479 LELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQD 538
Query: 1078 NFV------HHSXXXXXXXAGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLD 1131
F+ H + A E + M V + + + + +D+F++ ++ D
Sbjct: 539 VFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRAD 598
Query: 1132 EIHER 1136
+ +
Sbjct: 599 NVRSQ 603
Score = 47 (21.6 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 923 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMF 964
L+L GAID ++TS LG +++ P+ K L+ + F
Sbjct: 479 LELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
Score = 47 (21.6 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 973 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMF 1014
L+L GAID ++TS LG +++ P+ K L+ + F
Sbjct: 479 LELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 637 (229.3 bits), Expect = 8.1e-83, Sum P(3) = 8.1e-83
Identities = 152/443 (34%), Positives = 247/443 (55%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
++K + T+ E ++ L+SY V+++DE HER LH D L G++K + E+K+++
Sbjct: 345 ILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLIS 404
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIID 417
SAT++ E F +F+ A I ++PGR YP+ + Y TK+ + D YI +
Sbjct: 405 SATLDAEKFSAFFDD-APIFRIPGRRYPVDIFY--------TKAPEAD---YIDACCVSV 452
Query: 418 KKYPRTER-GDVLIFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRV 472
+ T+ GD+L+F++G EI + + K + IV+P+++ L + Q ++
Sbjct: 453 LQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKI 512
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F P RK I++TNIAETS+TID I +V+D G K+ +++ M +L ISKASA
Sbjct: 513 FEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASA 572
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFP 591
QR GRAGRT PG C+RLY+ Y E +T PEI+R+++ + +L L +G+ D+ F
Sbjct: 573 NQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFD 632
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
FL+ PP E + ++ L GA++ +T LGR +++ PVD +GKML+ + +
Sbjct: 633 FLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEE 692
Query: 652 VLSLAAVLSVQSPFTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS 709
++++AA+LSV S R +D +TARK HGD L++L Y +W + D S
Sbjct: 693 MVTIAAMLSVNSAIFYRP-KDKIIHADTARKNFNHMHGDHLSLLQVYNQW--AETDY--S 747
Query: 710 KKWCKRRGIEEQRFYEVTKLRSQ 732
+WC I+ + +R Q
Sbjct: 748 TQWCYENFIQYRSMKRARDVREQ 770
Score = 263 (97.6 bits), Expect = 8.1e-83, Sum P(3) = 8.1e-83
Identities = 55/121 (45%), Positives = 82/121 (67%)
Query: 23 EKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR 82
EK + + ET+ SLPV +K+++I V + +V+II G+TG GK+TQ+PQYLV+AGF +
Sbjct: 237 EKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTK 296
Query: 83 ----IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
I CTQPRR+A +S++ RVA E + N VGY IRFE ++T + ++T+G L R
Sbjct: 297 DKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHR 356
Query: 139 Q 139
+
Sbjct: 357 E 357
Score = 190 (71.9 bits), Expect = 7.5e-36, Sum P(4) = 7.5e-36
Identities = 41/121 (33%), Positives = 70/121 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+ Y E +T PEI+R+++ + +L L +G+ D+ F FL+ PP E
Sbjct: 581 RTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHE 640
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +T LGR +++ PVD +GKML+ + + M+ + L
Sbjct: 641 TLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAML 700
Query: 928 N 928
+
Sbjct: 701 S 701
Score = 131 (51.2 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G++K + E+K+++ SAT++ E F +F+
Sbjct: 364 LASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFD 418
Score = 88 (36.0 bits), Expect = 7.5e-36, Sum P(4) = 7.5e-36
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G++K
Sbjct: 364 LASYSVMIIDEAHERTLHTDILFGLVK 390
Score = 78 (32.5 bits), Expect = 8.0e-35, Sum P(4) = 8.0e-35
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++I+DE HER L+ D L G++
Sbjct: 364 LASYSVMIIDEAHERTLHTDILFGLV 389
Score = 75 (31.5 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T++L L+ GA++ +T LGR +++ PVD +GKML+ + + M+ +
Sbjct: 640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAM 699
Query: 977 LN 978
L+
Sbjct: 700 LS 701
Score = 75 (31.5 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T++L L+ GA++ +T LGR +++ PVD +GKML+ + + M+ +
Sbjct: 640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAM 699
Query: 1027 LN 1028
L+
Sbjct: 700 LS 701
Score = 75 (31.5 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T++L L+ GA++ +T LGR +++ PVD +GKML+ + + M+ +
Sbjct: 640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAM 699
Query: 1077 LN 1078
L+
Sbjct: 700 LS 701
Score = 37 (18.1 bits), Expect = 8.1e-83, Sum P(3) = 8.1e-83
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 7 EEWKLLLRTYLDFKQ 21
EE++LLL +DF Q
Sbjct: 203 EEYELLLDDQIDFIQ 217
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 557 (201.1 bits), Expect = 8.3e-83, Sum P(5) = 8.3e-83
Identities = 123/346 (35%), Positives = 205/346 (59%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQE---YNEKSQGWIVLPLHSTLSLEEQDR 471
I++ + G +LIF+ G EI S+ + + ++ ++ +I++PLHS LS E+Q
Sbjct: 742 IVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQAL 801
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF AP G RK ++STNIAETS+TID FVVD G +KE +D M +L W+S+A+
Sbjct: 802 VFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRAN 861
Query: 532 AEQRKGRAGRTGPGVCYRLYSEE--QYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
A+QRKGRAGR PGVC LY+ QY +LA+ PEI+RV ++ ++L + + R
Sbjct: 862 AKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQ-PVPEIQRVPLEQIVLRIKTLQTFASRN 920
Query: 590 -----FPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
LEAP +++ ++ L GA+D+++++T LG L+ LPVD+ +GK++++G+
Sbjct: 921 TLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGA 980
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKK 704
+F +D+VL++AA LS +SPF + + + + ++ + D LTVLNAY++WL V +
Sbjct: 981 IFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVAR 1040
Query: 705 --DRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLIT-DIP 747
+ S+ + + + L+ Q+ ++L G + D+P
Sbjct: 1041 RGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVP 1086
Score = 228 (85.3 bits), Expect = 8.3e-83, Sum P(5) = 8.3e-83
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 8 EWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGK 67
E + LL+ +++ +++E++ KI + + LP + I+ + VV+I+G+TGCGK
Sbjct: 426 ENRRLLQQFVERRKEERYQ---KIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGK 482
Query: 68 STQIPQYLVQAGFQR--------------IACTQPRRIACISLSKRVAYETLSQYSNLVG 113
STQ+PQ+++ F R I CTQPRR++ I +++RVA E L + LVG
Sbjct: 483 STQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVG 542
Query: 114 YQIRFEKHRREKTKIVFITEGLLLRQ 139
YQIR E + T++ F T G+LLR+
Sbjct: 543 YQIRLENKVSQSTRLSFCTTGILLRR 568
Score = 182 (69.1 bits), Expect = 2.8e-41, Sum P(6) = 2.8e-41
Identities = 41/127 (32%), Positives = 76/127 (59%)
Query: 809 RTGPGVCYRLYSEE--QYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK-----FPFL 861
R PGVC LY+ QY +LA+ PEI+RV ++ ++L + + R L
Sbjct: 871 RVMPGVCIHLYTSYRYQYHILAQ-PVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETL 929
Query: 862 EAPPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
EAP +++ ++ L GA+D+++++T LG L+ LPVD+ +GK++++G++F +D++L
Sbjct: 930 EAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVL 989
Query: 922 LLDLALN 928
+ L+
Sbjct: 990 TIAACLS 996
Score = 175 (66.7 bits), Expect = 8.3e-83, Sum P(5) = 8.3e-83
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A+D L S +++DE+HER DFLL ++K LL ++K+ILMSAT+N LF YF
Sbjct: 569 LASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYF 628
Query: 371 NRIAKIIKVPGRLYPIQ-LEYHPIVEL 396
A ++ +PGR +P+Q L I+E+
Sbjct: 629 GG-APVLDIPGRTFPVQQLFLEDILEM 654
Score = 140 (54.3 bits), Expect = 5.2e-24, Sum P(4) = 5.2e-24
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++A+D L S +++DE+HER DFLL ++K LL ++K+ILMSAT+N LF Y
Sbjct: 568 RLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDY 627
Query: 1175 F 1175
F
Sbjct: 628 F 628
Score = 111 (44.1 bits), Expect = 4.5e-34, Sum P(6) = 4.5e-34
Identities = 18/49 (36%), Positives = 38/49 (77%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+D+++++T LG L+ LPVD+ +GK++++G++F +D++L + L+
Sbjct: 948 GALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLS 996
Score = 111 (44.1 bits), Expect = 4.5e-34, Sum P(6) = 4.5e-34
Identities = 18/49 (36%), Positives = 38/49 (77%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+D+++++T LG L+ LPVD+ +GK++++G++F +D++L + L+
Sbjct: 948 GALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLS 996
Score = 111 (44.1 bits), Expect = 4.5e-34, Sum P(6) = 4.5e-34
Identities = 18/49 (36%), Positives = 38/49 (77%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+D+++++T LG L+ LPVD+ +GK++++G++F +D++L + L+
Sbjct: 948 GALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLS 996
Score = 76 (31.8 bits), Expect = 1.6e-72, Sum P(5) = 1.6e-72
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+A+D L S +++DE+HER DFLL ++K LL
Sbjct: 569 LASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Score = 68 (29.0 bits), Expect = 1.1e-71, Sum P(5) = 1.1e-71
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++A+D L S +I+DEVHER DFLL ++
Sbjct: 568 RLASDPLLGSVTHVIVDEVHERSEESDFLLLIL 600
Score = 53 (23.7 bits), Expect = 8.3e-83, Sum P(5) = 8.3e-83
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLR 1250
I+K++ +Y Q A G + + F + G+V +HP SV SQ V +
Sbjct: 1126 IVKIMTPDRVYIQTA-GGAVPREPSHHDLRFKTRGDGYVKIHPSSV-NSQVSVFQ 1178
Score = 52 (23.4 bits), Expect = 8.3e-83, Sum P(5) = 8.3e-83
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLL----FSSAIHTNSDFTRLVFDSWI 1325
LV+ + TS ++ +C +P + +L F +H + DF L+ WI
Sbjct: 1182 LVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKVELH-DGDFLFLLESGWI 1232
Score = 41 (19.5 bits), Expect = 2.8e-41, Sum P(6) = 2.8e-41
Identities = 18/64 (28%), Positives = 24/64 (37%)
Query: 511 MSYDVT-AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYR---LYSEEQYSLLAEYSTPE 566
M YD + QE I + E +A PG + L E Y AEYS P
Sbjct: 659 MEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPT 718
Query: 567 IRRV 570
+ +
Sbjct: 719 CKSI 722
Score = 37 (18.1 bits), Expect = 1.1e-33, Sum P(6) = 1.1e-33
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 817 RLYSEEQYSLLAEYSTPEIRRV 838
+L E Y AEYS P + +
Sbjct: 701 KLTLAETYQRYAEYSKPTCKSI 722
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 596 (214.9 bits), Expect = 9.2e-83, Sum P(3) = 9.2e-83
Identities = 141/444 (31%), Positives = 243/444 (54%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L+SY VL++DE HER LH D L G++K + ++K+++ SAT++ E F YF+ A
Sbjct: 578 LASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDG-APT 636
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR Y + Y E D LD + +L I + GD+L+F++G
Sbjct: 637 FNIPGRKYEVTTHYTQAPEADY-----LDAA-VVTVLQI----HITEPLGDILVFLTGQE 686
Query: 437 EISSIVRAAQEYNE----KSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
E+ Q K + I+ ++STL + Q ++F P RK +++TNIAET
Sbjct: 687 EVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAET 746
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+TIDGI +V+D G K+ ++ M +L +S+ASA QRKGRAGR PG C+RL++
Sbjct: 747 SLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFT 806
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ + L E + PEI+R ++ +++L L MG+ D+ F F++ PPA+ + +++ L
Sbjct: 807 AWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYAL 866
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA++ + ++T LGR +++ PVD L KM++ + + +L++ A+LSV + R +
Sbjct: 867 GALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRP-K 925
Query: 672 DPD--CETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKL 729
D + ARK GD LT++N + +W ++ + +WC I+ + +
Sbjct: 926 DKAFAADAARKLFFHPQGDHLTLMNVFNQW----RESGYAVQWCFENFIQHRSMKRAQDV 981
Query: 730 RSQFKQVLG--DSGLITDIPGPDA 751
R Q + +L + L++++ D+
Sbjct: 982 RDQLELLLERVEIPLVSNVDDTDS 1005
Score = 281 (104.0 bits), Expect = 9.2e-83, Sum P(3) = 9.2e-83
Identities = 56/114 (49%), Positives = 82/114 (71%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IAC 85
M I+E + SLPV Y++++ID V + +V+II G+TG GK+TQIPQYL +AGF + I C
Sbjct: 458 MTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGC 517
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
TQPRR+A +S++ RVA E + N VGY IRFE +KT + ++T+G+L+R+
Sbjct: 518 TQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVRE 571
Score = 191 (72.3 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
Identities = 38/123 (30%), Positives = 74/123 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R PG C+RL++ + + L E + PEI+R ++ +++L L MG+ D+ F F++ PPA+
Sbjct: 795 RVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQ 854
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ +++ L GA++ + ++T LGR +++ PVD L KM++ + + +L + L
Sbjct: 855 TLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAML 914
Query: 928 NFG 930
+ G
Sbjct: 915 SVG 917
Score = 131 (51.2 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY VL++DE HER LH D L G++K + ++K+++ SAT++ E F YF+
Sbjct: 578 LASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFD 632
Score = 89 (36.4 bits), Expect = 9.2e-83, Sum P(3) = 9.2e-83
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY VL++DE HER LH D L G++K
Sbjct: 578 LASYSVLIIDEAHERTLHTDILFGLLK 604
Score = 79 (32.9 bits), Expect = 1.0e-81, Sum P(3) = 1.0e-81
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY +LI+DE HER L+ D L G++
Sbjct: 578 LASYSVLIIDEAHERTLHTDILFGLL 603
Score = 75 (31.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 980
GA++ + ++T LGR +++ PVD L KM++ + + +L + L+ G
Sbjct: 867 GALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVG 917
Score = 75 (31.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 1030
GA++ + ++T LGR +++ PVD L KM++ + + +L + L+ G
Sbjct: 867 GALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVG 917
Score = 70 (29.7 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA++ + ++T LGR +++ PVD L KM++ + + +L +
Sbjct: 867 GALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTI 910
Score = 54 (24.1 bits), Expect = 5.7e-59, Sum P(3) = 5.7e-59
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 5 LYEEWKLLLRTYLDFKQKEKFSTL--MKIRETQNSLPVAQYKQEIID--TVLKERVV 57
L+++ KL + DF++K+K L +I E+Q S Q EI D ++LK +
Sbjct: 311 LFKDQKLTEQEIKDFEKKKKLYELASQRINESQQSDDYYQLPSEIKDKDSLLKSSYI 367
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 643 (231.4 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 158/435 (36%), Positives = 238/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F Y
Sbjct: 659 ECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQY 718
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR YP+++ Y E D LD I ++ I + P GD+L
Sbjct: 719 FYE-APIFTIPGRTYPVEVLYTKEPETDY-----LDAS-LITVMQIHLTEPP----GDIL 767
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++S L E Q R+F AP G RK +
Sbjct: 768 VFLTGQEEIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV 826
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + L IS+A A+QR GRAGRTGP
Sbjct: 827 IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP 886
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E + +
Sbjct: 887 GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT 946
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + +T LGR +++ P++ L KML+ + +L++ ++LSVQ+
Sbjct: 947 AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN 1006
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S WC I+ +
Sbjct: 1007 VFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSW----KNNKFSNPWCYENFIQARSL 1062
Query: 724 YEVTKLRSQFKQVLG 738
+R KQ+LG
Sbjct: 1063 RRAQDIR---KQMLG 1074
Score = 246 (91.7 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 56/142 (39%), Positives = 84/142 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
M P EWK + K T + I E + SLP+ + K+++I V +++I+
Sbjct: 520 MMPNDIPEWKK--HAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVI 577
Query: 61 GDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIR 117
G+TG GK+TQI QYL +AG+ +I CTQPRR+A +S++KRV+ E VGY IR
Sbjct: 578 GETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIR 637
Query: 118 FEKHRREKTKIVFITEGLLLRQ 139
FE +T I ++T+G+LLR+
Sbjct: 638 FEDCTSPETVIKYMTDGMLLRE 659
Score = 210 (79.0 bits), Expect = 3.4e-35, Sum P(3) = 3.4e-35
Identities = 42/102 (41%), Positives = 66/102 (64%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ S +LSL MG+ D+ F F++APP E
Sbjct: 883 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPME 942
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D + +T LGR +++ P++ L KML+
Sbjct: 943 TLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 984
Score = 115 (45.5 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L Y +++LDE HER +H D L G++K + ++K+I+ SAT++ F YF
Sbjct: 663 DPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYF 719
Score = 76 (31.8 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++LDE HER +H D L G++K
Sbjct: 666 LGQYAIIMLDEAHERTIHTDVLFGLLK 692
Score = 68 (29.0 bits), Expect = 8.2e-82, Sum P(3) = 8.2e-82
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y I++LDE HER ++ D L G++
Sbjct: 663 DPDLGQYAIIMLDEAHERTIHTDVLFGLL 691
Score = 62 (26.9 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 941 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 984
Score = 62 (26.9 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 941 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 984
Score = 62 (26.9 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++T++ ++ GA+D + +T LGR +++ P++ L KML+
Sbjct: 941 METLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLI 984
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 623 (224.4 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 151/435 (34%), Positives = 238/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ + L SY V+++DE HER L D L G++K + + ++K+++ SAT++ E F +
Sbjct: 508 ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F++ A I + PGR YP+ + + E D +D I + I K P GDVL
Sbjct: 568 FDQ-APIFRFPGRRYPVDICFTTAPEADY-----MDAA--ITTVLTIHVKEPL---GDVL 616
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F+ G EI ++ + K + I+ P+++ L E Q ++F PEG RK ++
Sbjct: 617 VFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVL 676
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TIDGI++VVD G K SY+ M +L ISKASA QR GRAGRT PG
Sbjct: 677 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPG 736
Query: 546 VCYRLYSE-EQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
CYRLY+ Y+ L + + PEI+R ++ S++LSL +G+ ++ F F++ PP+E + S
Sbjct: 737 KCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKS 796
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV-QS 663
+ L GA++ +T GR +++ P+D L KM+V + D ++S+AA+LS+ S
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPS 856
Query: 664 PFTNRAFRDPDCETARKELE-SNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
F + + A K N GD + L Y W K+ S +WC I+ +
Sbjct: 857 IFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSW----KETNYSTQWCYENYIQVRS 912
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 913 MKRARDIRDQLEGLL 927
Score = 258 (95.9 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 50/117 (42%), Positives = 80/117 (68%)
Query: 26 STLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR--- 82
S ++E + +LP+ Y+ ++++ V +V+II G+TG GK+TQIPQYL +AG+ +
Sbjct: 392 SAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGK 451
Query: 83 IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+ CTQPRR+A +S++ RVA E + + VGY IRFE EKT + ++T+G+LLR+
Sbjct: 452 VGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 508
Score = 194 (73.4 bits), Expect = 1.4e-34, Sum P(4) = 1.4e-34
Identities = 41/123 (33%), Positives = 72/123 (58%)
Query: 809 RTGPGVCYRLYSE-EQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG CYRLY+ Y+ L + + PEI+R ++ S++LSL +G+ ++ F F++ PP+E
Sbjct: 732 RTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSE 791
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ S+ L GA++ +T GR +++ P+D L KM+V + D ++ + L
Sbjct: 792 ALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAML 851
Query: 928 NFG 930
+ G
Sbjct: 852 SIG 854
Score = 120 (47.3 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 21/56 (37%), Positives = 38/56 (67%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
L SY V+++DE HER L D L G++K + + ++K+++ SAT++ E F +F++
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQ 570
Score = 78 (32.5 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L SY V+++DE HER L D L G++K
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVK 541
Score = 73 (30.8 bits), Expect = 3.3e-22, Sum P(4) = 3.3e-22
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 980
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+ G
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 854
Score = 73 (30.8 bits), Expect = 3.3e-22, Sum P(4) = 3.3e-22
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 1030
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+ G
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIG 854
Score = 72 (30.4 bits), Expect = 5.2e-82, Sum P(3) = 5.2e-82
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L SY ++I+DE HER L D L G++
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLV 540
Score = 67 (28.6 bits), Expect = 1.4e-21, Sum P(4) = 1.4e-21
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
L+L GA++ +T GR +++ P+D L KM+V + D ++ + L+
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLS 852
Score = 44 (20.5 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 528 SKASAEQRKGRAGRTGPGV-CYRLYSEEQYSLLAEYST 564
++A AE+ RA R PGV Y+ E LL + T
Sbjct: 57 TRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKT 94
Score = 40 (19.1 bits), Expect = 1.4e-34, Sum P(4) = 1.4e-34
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1111 PKQVQVAADNFLSSYDV 1127
PK QV ADN + ++ V
Sbjct: 861 PKDKQVHADNAMKNFHV 877
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 631 (227.2 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 151/434 (34%), Positives = 237/434 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
EV D L Y V++LDE HER + D L G++K L ++++I+ SAT++ + F Y
Sbjct: 681 EVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEY 740
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F I +PGR +P+++ Y E S+ LD I ++ I + P GD+L
Sbjct: 741 FYG-CPIFSIPGRTFPVEIMYSKEPE-----SDYLDAA-LITVMQIHLTEPP----GDML 789
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E K+ G ++LP++S L E Q R+F AP G RK +
Sbjct: 790 LFLTGQEEIDTACEILYE-RMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVV 848
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETSITID I +V+D G VK+ +YD M +L IS+A A+QR GRAGRTGP
Sbjct: 849 IATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGP 908
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G C+RLY+E Y S + + P+I+R ++ +L L MG+ D+ F F++ PP + +
Sbjct: 909 GKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLT 968
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L A+D + +T LGR ++D P++ L K+L+ + +LS+ A+LS+QS
Sbjct: 969 ALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQS 1028
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + HGD LT+LN Y W K+ S WC I+ ++
Sbjct: 1029 VFYRPKEKQQQADQKKAKFHDPHGDHLTLLNVYNAW---KRSGF-SNAWCYENFIQARQI 1084
Query: 724 YEVTKLRSQFKQVL 737
+R Q ++
Sbjct: 1085 RRAQDVRQQLLGIM 1098
Score = 261 (96.9 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 51/116 (43%), Positives = 81/116 (69%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---I 83
T M I++ + SLPV +++Q++++ V + +++I+ GDTG GK+TQ+ QYL +AG+ I
Sbjct: 566 TNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGII 625
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++KRVA E + VGY IRFE +TKI ++T+G+L R+
Sbjct: 626 GCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQRE 681
Score = 183 (69.5 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 36/102 (35%), Positives = 62/102 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY+E Y S + + P+I+R ++ +L L MG+ D+ F F++ PP
Sbjct: 905 RTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTN 964
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L A+D + +T LGR ++D P++ L K+L+
Sbjct: 965 TMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLI 1006
Score = 74 (31.1 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 211 DANEVEFRLKH--DPK-QVQVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
D E ++K+ D Q +V D L Y +++LDE HER + D L G++ L
Sbjct: 662 DCTSPETKIKYMTDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTL 717
Score = 73 (30.8 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
V D L Y V++LDE HER + D L G++K L
Sbjct: 682 VLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTL 717
Score = 62 (26.9 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+TML L+ A+D + +T LGR ++D P++ L K+L+
Sbjct: 964 NTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLI 1006
Score = 62 (26.9 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+TML L+ A+D + +T LGR ++D P++ L K+L+
Sbjct: 964 NTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLI 1006
Score = 62 (26.9 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+TML L+ A+D + +T LGR ++D P++ L K+L+
Sbjct: 964 NTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLI 1006
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 523 QEFWISKASAEQRKGRAGRTG 543
++ W + SA++R+GR G G
Sbjct: 1220 EDDW--RLSAQRRQGRGGGGG 1238
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 611 (220.1 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 145/428 (33%), Positives = 238/428 (55%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L+SY V+++DE HER LH D L G+IK + ++K+++ SAT++ E F ++F+ A +
Sbjct: 524 LASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFDD-APV 582
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
++PGR +P+ + Y E D ++ + +L I + P GDVL+F++G
Sbjct: 583 FRIPGRRFPVDIYYTKAPEADYLEA------CVVSVLQIHVTQSP----GDVLVFLTGQE 632
Query: 437 EISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
EI + QE K +VLP+++ L + Q ++F+ P G RK +V+TNIAET
Sbjct: 633 EIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAET 692
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+TIDGI +V+D G K+ SY+ M +L S+ASA QR GRAGR G C+RLY+
Sbjct: 693 SLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYT 752
Query: 553 EEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ E +T PEI+R ++ +++L L +G+ D+ F F++ PP E + ++ L
Sbjct: 753 AWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYAL 812
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA++ +T LGR +++LPVD L KM++ + + VL++AA+LSV + R +
Sbjct: 813 GALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRP-K 871
Query: 672 DP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKL 729
D + AR GD L +LN Y +W+ + S +WC I+ + +
Sbjct: 872 DKVVHADNARMNFVVPGGDHLVLLNVYTQWV----ESGYSTQWCFENFIQFRSMKRARDV 927
Query: 730 RSQFKQVL 737
R Q + ++
Sbjct: 928 RDQLEGLM 935
Score = 259 (96.2 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 51/126 (40%), Positives = 83/126 (65%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
+ Q EK I+E + SLP+ Y+++++ + ++++I G+TG GK+TQIPQYL++
Sbjct: 394 ELSQAEKQK--QSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLE 451
Query: 78 AGF----QRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITE 133
G+ +I CTQPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+
Sbjct: 452 EGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTD 511
Query: 134 GLLLRQ 139
G+LLR+
Sbjct: 512 GMLLRE 517
Score = 166 (63.5 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ + E +T PEI+R ++ +++L L +G+ D+ F F++ PP E
Sbjct: 741 RVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHE 800
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +T LGR +++LPVD L KM++ + + +L + L
Sbjct: 801 TLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAML 860
Query: 928 N 928
+
Sbjct: 861 S 861
Score = 130 (50.8 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + ++K+++ SAT++ E F ++F+
Sbjct: 524 LASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFD 578
Score = 89 (36.4 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 524 LASYSVIIIDEAHERTLHTDILFGLIK 550
Score = 81 (33.6 bits), Expect = 1.3e-81, Sum P(3) = 1.3e-81
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
T+ L+SY ++I+DE HER L+ D L G+I
Sbjct: 520 TEPDLASYSVIIIDEAHERTLHTDILFGLI 549
Score = 78 (32.5 bits), Expect = 8.1e-24, Sum P(4) = 8.1e-24
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLD-- 1024
+T++L L+ GA++ +T LGR +++LPVD L KM++ + + +L +
Sbjct: 800 ETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAM 859
Query: 1025 LALNFGAI-DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQ-IDTMLLLDLAL-NFVH 1081
L++N K++V + V P G LV +++ Q +++ NF+
Sbjct: 860 LSVNNSIFYRPKDKVVHADNARMNFVV--PGGDHLVLLNVYTQWVESGYSTQWCFENFIQ 917
Query: 1082 HSXXXXXXXAGERLES-MDANEVE 1104
++LE MD EVE
Sbjct: 918 FRSMKRARDVRDQLEGLMDRIEVE 941
Score = 72 (30.4 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T++L L+ GA++ +T LGR +++LPVD L KM++ + + +L +
Sbjct: 800 ETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAM 859
Query: 977 LN 978
L+
Sbjct: 860 LS 861
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 582 MGLGD--VRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSD 629
+GL D V +F + + V L G ID +R+T+ L D
Sbjct: 16 LGLSDRYVAQFMIGLVQKSSGPQDFVSRLQDTGTIDIDQRITAFAHELYD 65
Score = 39 (18.8 bits), Expect = 8.1e-24, Sum P(4) = 8.1e-24
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 588 RRFPVDIYYTKAPEADYLEACVVSVLQ 614
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 547 (197.6 bits), Expect = 5.5e-82, Sum P(4) = 5.5e-82
Identities = 125/339 (36%), Positives = 190/339 (56%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPL--HSTLSLEEQDRVFHYAPEGLRKC 483
G +LIF++G +ISS+ Q + +V+ L H ++ EQ +F G+RK
Sbjct: 499 GGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKI 558
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
+++TNIAETSITI+ + FV+D GK KE SYD L WISK SA+QR+GRAGR
Sbjct: 559 VLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVR 618
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENI 601
PG CY LY + Y AEY PEI R + SL L + + LG + +F L++P +
Sbjct: 619 PGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAV 678
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
+ ++ L GA+D E +T+LGR+LS LP++ LGKML+ G++ +D +L++AA LSV
Sbjct: 679 QKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSV 738
Query: 662 QSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
+ PF + E A+ + +H D L ++ AY+ W +++ +C + + Q
Sbjct: 739 RDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESA-VYDYCWKNFLSIQ 797
Query: 722 RFYEVTKLRSQFKQVLGDSGLITDIP------GPDASLS 754
+ LR +F +L D+GLI P G DA+L+
Sbjct: 798 SLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLT 836
Score = 246 (91.7 bits), Expect = 5.5e-82, Sum P(4) = 5.5e-82
Identities = 48/141 (34%), Positives = 92/141 (65%)
Query: 10 KLLLRTYLDFKQKEKF--STL--MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGC 65
K+L + L + ++++ +++ ++ +++ SLP + + ++ + + +V++I+G+TGC
Sbjct: 188 KILWQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGC 247
Query: 66 GKSTQIPQYLVQA-------GFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRF 118
GK+TQIPQ+++++ F I CTQPRRI+ +S+S+RVAYE Q VGY++R
Sbjct: 248 GKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRL 307
Query: 119 EKHRREKTKIVFITEGLLLRQ 139
E + T+++F T G+LLR+
Sbjct: 308 EGVKGRDTRLLFCTTGILLRR 328
Score = 212 (79.7 bits), Expect = 8.8e-45, Sum P(4) = 8.8e-45
Identities = 46/122 (37%), Positives = 70/122 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY + Y AEY PEI R + SL L + + LG + +F L++P
Sbjct: 616 RVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPEL 675
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
++ ++ L GA+D E +TTLGR+LS LP++ LGKML+ G++ +D +L +
Sbjct: 676 LAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAG 735
Query: 927 LN 928
L+
Sbjct: 736 LS 737
Score = 175 (66.7 bits), Expect = 5.5e-82, Sum P(4) = 5.5e-82
Identities = 45/146 (30%), Positives = 76/146 (52%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DEIHER ++ DFLL ++K LL +E+K+ILMSAT++ ELF +YF
Sbjct: 332 DRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGG- 390
Query: 374 AKIIKVPGRLYPIQLEY-HPIVELDR---TKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
A +I +PG YP++ + I+E+ R T ++D R + +K+ P+ + +
Sbjct: 391 AGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKM-NKQIPKKRKSQIT 449
Query: 430 IFMSGISEISSIVRAAQEYNEKSQGW 455
+ + + E E W
Sbjct: 450 FVVEDALRAADFKEFSPETRESLSCW 475
Score = 145 (56.1 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 41/110 (37%), Positives = 61/110 (55%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L +++DEIHER ++ DFLL ++K LL +E+K+ILMSAT++ ELF +Y
Sbjct: 328 RLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSY 387
Query: 1175 FNRIAKDLLSGST--ARSHKDVTILKVILASGLYPQVAIGDEFNTSETVK 1222
F + G T RSH IL++ L P I D++ T K
Sbjct: 388 FGGAGVIYIPGFTYPVRSHFLEDILEMTRYR-LTPYNQI-DDYGQERTWK 435
Score = 114 (45.2 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 904 LGKMLVFGSMFHQIDTMLLLDLALNF----GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
LG + F S Q +L + A+ F GA+D E +T+LGR+LS LP++ LGKML+
Sbjct: 659 LGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLI 718
Query: 960 FGSMFHQIDTMLLLDLALN 978
G++ +D +L + L+
Sbjct: 719 LGAILGCLDPILTVAAGLS 737
Score = 114 (45.2 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 954 LGKMLVFGSMFHQIDTMLLLDLALNF----GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
LG + F S Q +L + A+ F GA+D E +T+LGR+LS LP++ LGKML+
Sbjct: 659 LGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLI 718
Query: 1010 FGSMFHQIDTMLLLDLALN 1028
G++ +D +L + L+
Sbjct: 719 LGAILGCLDPILTVAAGLS 737
Score = 114 (45.2 bits), Expect = 1.1e-34, Sum P(4) = 1.1e-34
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 1004 LGKMLVFGSMFHQIDTMLLLDLALNF----GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
LG + F S Q +L + A+ F GA+D E +T+LGR+LS LP++ LGKML+
Sbjct: 659 LGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLI 718
Query: 1060 FGSMFHQIDTMLLLDLALN 1078
G++ +D +L + L+
Sbjct: 719 LGAILGCLDPILTVAAGLS 737
Score = 69 (29.3 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL ++K LL E+
Sbjct: 341 VIVDEIHERGMNEDFLLIILKDLLSRRSEL 370
Score = 58 (25.5 bits), Expect = 8.9e-70, Sum P(4) = 8.9e-70
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEI 269
++ D L +I+DE+HER + DFLL ++ L E+
Sbjct: 328 RLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSEL 370
Score = 40 (19.1 bits), Expect = 5.5e-82, Sum P(4) = 5.5e-82
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 812 PGVCYRLYSEEQYSL 826
PG+C +++E +SL
Sbjct: 846 PGICSVVHNERSFSL 860
Score = 40 (19.1 bits), Expect = 5.5e-28, Sum P(3) = 5.5e-28
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 544 PGVCYRLYSEEQYSL 558
PG+C +++E +SL
Sbjct: 846 PGICSVVHNERSFSL 860
Score = 38 (18.4 bits), Expect = 8.9e-82, Sum P(4) = 8.9e-82
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 1168 IELFHTYFNRIAKD--LLSG--STARSH-KDVTILKVILASGLYPQV 1209
I+ F + KD L+ G S S D + + ++ G+YP +
Sbjct: 802 IDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGI 848
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 556 (200.8 bits), Expect = 7.7e-82, Sum P(4) = 7.7e-82
Identities = 124/338 (36%), Positives = 196/338 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G +L+F+ G++EI + Q N +S ++ PLHS+LS EEQ
Sbjct: 838 IVDGKHSYPP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQ 896
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD + M +L++ ++S+A
Sbjct: 897 AVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQA 956
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ Y+ L + PEI+RV ++ L L + + +
Sbjct: 957 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHN 1016
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ ER+T LG L+ LPVD+ +GK+++FGS
Sbjct: 1017 LQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGS 1076
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKK 704
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W K
Sbjct: 1077 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTK 1136
Query: 705 DRVR-SKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSG 741
+ VR S +C++ + + E+ L+ QF ++L D G
Sbjct: 1137 EGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIG 1174
Score = 238 (88.8 bits), Expect = 7.7e-82, Sum P(4) = 7.7e-82
Identities = 50/131 (38%), Positives = 82/131 (62%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ I + + SLP + ++ I++ + K +VV+I+G TGCGK+TQIPQ+++
Sbjct: 525 FRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDD 584
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+++A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 585 SLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 644
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 645 TTGVLLRRLEG 655
Score = 176 (67.0 bits), Expect = 1.6e-40, Sum P(4) = 1.6e-40
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ Y+ L + PEI+RV ++ L L + + + +E
Sbjct: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 1026
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L
Sbjct: 1027 PPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1086
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1087 IAASLAF 1093
Score = 172 (65.6 bits), Expect = 7.7e-82, Sum P(4) = 7.7e-82
Identities = 40/113 (35%), Positives = 62/113 (54%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ +++ILMSAT+N ELF YFN
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNS- 714
Query: 374 AKIIKVPGRLYPI-QLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER 425
+I +PGR +P+ Q + + R + D PY+R + I K+ + R
Sbjct: 715 CPVITIPGRTFPVDQFFLEDAIAVTRYVLQ--DGSPYMRSMKQISKEKLKARR 765
Score = 133 (51.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 1094 RLESMDANEVEFRLKHDPKQV---QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 1150
RLES+ ++ RL + V ++ D L +++DE+HER DFLL V+K +
Sbjct: 630 RLESVKSSAT--RLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDI 687
Query: 1151 LHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGST 1187
+ +++ILMSAT+N ELF YFN + G T
Sbjct: 688 VSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRT 724
Score = 114 (45.2 bits), Expect = 4.0e-34, Sum P(4) = 4.0e-34
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1042 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1093
Score = 114 (45.2 bits), Expect = 4.0e-34, Sum P(4) = 4.0e-34
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1042 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1093
Score = 114 (45.2 bits), Expect = 4.0e-34, Sum P(4) = 4.0e-34
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1042 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1093
Score = 62 (26.9 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L +++DE+HER DFLL V+K
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLK 685
Score = 59 (25.8 bits), Expect = 4.8e-70, Sum P(4) = 4.8e-70
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFLLLVL 684
Score = 49 (22.3 bits), Expect = 7.7e-82, Sum P(4) = 7.7e-82
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQV----AIGDEFNTSET--VK------EALFHCKD 1230
+G A S+ ++ ++ +L + LYP V + +F + T V+ E F K+
Sbjct: 1199 TGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKN 1258
Query: 1231 KGFVSLHPFSV 1241
G+V +HP SV
Sbjct: 1259 DGYVHIHPSSV 1269
Score = 40 (19.1 bits), Expect = 4.6e-68, Sum P(4) = 4.6e-68
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 666 IVDEVHERTEESDFLLLV 683
Score = 39 (18.8 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 1328 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSID 1365
Score = 39 (18.8 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1243 TSQPDVLRISEDDIVDPPPGLKL 1265
T + D L + DIV PGL++
Sbjct: 674 TEESDFLLLVLKDIVSQRPGLQV 696
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 666 (239.5 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 154/445 (34%), Positives = 251/445 (56%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
+IK L + E +D L+ Y ++LDE HER + D L ++K ++ A+ K+I+
Sbjct: 723 IIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVT 782
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIID 417
SAT++ E F TYF + I +PG+++P+++ + E D ++ I +L+I
Sbjct: 783 SATLDAEKFSTYFFN-SPIFTIPGKIFPVEILHSKEPESDYVEAS------LITVLNIHL 835
Query: 418 KKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGW-----IVLPLHSTLSLEEQDRV 472
++P GD+L+F++G EI++ E +K + I+LP++S+L E Q +
Sbjct: 836 NEHP----GDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F AP G RKCI++TNIAE S+TIDGI FV+D G K YD M +L ISKA+A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
+QR GRAGRTGPG CYRLY+EE Y + ++E S PEI+R+++ S++L L +G+ D F
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
F+++P E + S+ +L GA+D +T LG+ +++ P++ L K+L+ F+ D
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDD 1071
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
V+++ ++LSVQ+ F + + + + GD +T LN Y +W K+ S
Sbjct: 1072 VVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKW----KENSFSNY 1127
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQV 736
WC I+ + +R Q +
Sbjct: 1128 WCHENFIQSRALKRAQDVRKQMLSI 1152
Score = 233 (87.1 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 8 EWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGK 67
EWK + Y + + I E ++ LP+ K +++ + K V+I+ G+TG GK
Sbjct: 604 EWK---KNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGK 660
Query: 68 STQIPQYLVQAGFQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE 124
+TQIPQYL +A + + CTQPRR+A +S++KRV+ E VGY IRF+
Sbjct: 661 TTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSN 720
Query: 125 KTKIVFITEGLLLRQ 139
T I ++T+G+LLR+
Sbjct: 721 DTIIKYLTDGMLLRE 735
Score = 212 (79.7 bits), Expect = 2.1e-32, Sum P(4) = 2.1e-32
Identities = 42/116 (36%), Positives = 74/116 (63%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+EE Y + ++E S PEI+R+++ S++L L +G+ D F F+++P E
Sbjct: 960 RTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVE 1019
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ S+ +L GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1020 TLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 72 (30.4 bits), Expect = 2.1e-32, Sum P(4) = 2.1e-32
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAAD 314
+D L+ Y ++LDE HER + D L CLL V AD
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILF----CLLKDVVRKRAD 776
Score = 65 (27.9 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFL 255
+ +D L+ Y +ILDE HER + D L
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDIL 763
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 917 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 967 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 1017 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 38 (18.4 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNC 1294
P + + +VY L+ T+K ++ +C
Sbjct: 1209 PSSTLFNKNPLFVVYHELVLTNKEYIRDC 1237
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 666 (239.5 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 154/445 (34%), Positives = 251/445 (56%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
+IK L + E +D L+ Y ++LDE HER + D L ++K ++ A+ K+I+
Sbjct: 723 IIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVT 782
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIID 417
SAT++ E F TYF + I +PG+++P+++ + E D ++ I +L+I
Sbjct: 783 SATLDAEKFSTYFFN-SPIFTIPGKIFPVEILHSKEPESDYVEAS------LITVLNIHL 835
Query: 418 KKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGW-----IVLPLHSTLSLEEQDRV 472
++P GD+L+F++G EI++ E +K + I+LP++S+L E Q +
Sbjct: 836 NEHP----GDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F AP G RKCI++TNIAE S+TIDGI FV+D G K YD M +L ISKA+A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
+QR GRAGRTGPG CYRLY+EE Y + ++E S PEI+R+++ S++L L +G+ D F
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
F+++P E + S+ +L GA+D +T LG+ +++ P++ L K+L+ F+ D
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDD 1071
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
V+++ ++LSVQ+ F + + + + GD +T LN Y +W K+ S
Sbjct: 1072 VVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKW----KENSFSNY 1127
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQV 736
WC I+ + +R Q +
Sbjct: 1128 WCHENFIQSRALKRAQDVRKQMLSI 1152
Score = 233 (87.1 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 8 EWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGK 67
EWK + Y + + I E ++ LP+ K +++ + K V+I+ G+TG GK
Sbjct: 604 EWK---KNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGK 660
Query: 68 STQIPQYLVQAGFQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE 124
+TQIPQYL +A + + CTQPRR+A +S++KRV+ E VGY IRF+
Sbjct: 661 TTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSN 720
Query: 125 KTKIVFITEGLLLRQ 139
T I ++T+G+LLR+
Sbjct: 721 DTIIKYLTDGMLLRE 735
Score = 212 (79.7 bits), Expect = 2.1e-32, Sum P(4) = 2.1e-32
Identities = 42/116 (36%), Positives = 74/116 (63%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+EE Y + ++E S PEI+R+++ S++L L +G+ D F F+++P E
Sbjct: 960 RTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVE 1019
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ S+ +L GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1020 TLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 72 (30.4 bits), Expect = 2.1e-32, Sum P(4) = 2.1e-32
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAAD 314
+D L+ Y ++LDE HER + D L CLL V AD
Sbjct: 738 SDTLLTKYSFIILDEAHERTISTDILF----CLLKDVVRKRAD 776
Score = 65 (27.9 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFL 255
+ +D L+ Y +ILDE HER + D L
Sbjct: 735 ETLSDTLLTKYSFIILDEAHERTISTDIL 763
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 917 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 967 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 60 (26.2 bits), Expect = 6.2e-17, Sum P(4) = 6.2e-17
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 1017 IDTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++T++ L+ GA+D +T LG+ +++ P++ L K+L+ F+ D ++ +
Sbjct: 1018 VETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Score = 38 (18.4 bits), Expect = 8.2e-82, Sum P(4) = 8.2e-82
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNC 1294
P + + +VY L+ T+K ++ +C
Sbjct: 1209 PSSTLFNKNPLFVVYHELVLTNKEYIRDC 1237
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 556 (200.8 bits), Expect = 1.3e-81, Sum P(4) = 1.3e-81
Identities = 123/346 (35%), Positives = 203/346 (58%)
Query: 424 ERGDVLIFMSGISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
E G +L+F+ G IS++ + KS ++++PLHS + Q +VF P G+RK
Sbjct: 601 EDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRK 660
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
+++TNIAETSITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR
Sbjct: 661 IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV 720
Query: 543 GPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAEN 600
PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P E
Sbjct: 721 QPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEA 780
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
+ S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS
Sbjct: 781 VSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS 840
Query: 661 VQSPFTNRAFRDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGI 718
+ PF ++ + RKEL + D LTV+NA++ W ++ R +K +C +
Sbjct: 841 FKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFL 900
Query: 719 EEQRFYEVTKLRSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
+ ++ QF + L +G ++ P P ++++S E+ ++
Sbjct: 901 SSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIK 946
Score = 206 (77.6 bits), Expect = 8.3e-43, Sum P(4) = 8.3e-43
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 719 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSD 778
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 779 EAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 838
Query: 927 LNF 929
L+F
Sbjct: 839 LSF 841
Score = 193 (73.0 bits), Expect = 1.3e-81, Sum P(4) = 1.3e-81
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 301 DLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 360
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 361 DYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS 420
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 421 ILYCTTGIILQ 431
Score = 175 (66.7 bits), Expect = 1.3e-81, Sum P(4) = 1.3e-81
Identities = 42/93 (45%), Positives = 59/93 (63%)
Query: 313 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 372
+D+ LSS +VLDEIHER+L D L+ VIK LL+ ++K+ILMSAT+N E F YF
Sbjct: 435 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGN 494
Query: 373 IAKIIKVPGRLYPIQLEY--HPIVELDRTKSEK 403
+I +PG +P+ +EY I+E R E+
Sbjct: 495 -CPMIHIPGFTFPV-VEYLLEDIIEKIRYVPEQ 525
Score = 152 (58.6 bits), Expect = 4.7e-24, Sum P(3) = 4.7e-24
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D+ LSS +VLDEIHER+L D L+ VIK LL+ ++K+ILMSAT+N E F YF
Sbjct: 435 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGN 494
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 495 CPMIHIPGFT 504
Score = 104 (41.7 bits), Expect = 3.1e-32, Sum P(4) = 3.1e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 789 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 841
Score = 104 (41.7 bits), Expect = 3.1e-32, Sum P(4) = 3.1e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 789 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 841
Score = 104 (41.7 bits), Expect = 3.1e-32, Sum P(4) = 3.1e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 789 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 841
Score = 88 (36.0 bits), Expect = 1.6e-72, Sum P(4) = 1.6e-72
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 306
+D LSS +VLDEIHER+L D L+ VIK LL+
Sbjct: 435 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 469
Score = 80 (33.2 bits), Expect = 1.3e-81, Sum P(4) = 1.3e-81
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
+R KD S + + K I+K ++ +GLYP+VA N + K + K G V+
Sbjct: 927 SRNPKDPKSNINSDNEK---IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGLVA 982
Query: 1236 LHPFSVFTSQPD 1247
+HP SV Q +
Sbjct: 983 IHPKSVNVEQTE 994
Score = 78 (32.5 bits), Expect = 1.7e-71, Sum P(4) = 1.7e-71
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D+ LSS ++LDE+HER+L D L+ VI L+
Sbjct: 435 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 469
Score = 46 (21.3 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ + FL+ L MP + +F T ++V
Sbjct: 609 LPGWDNISTLHDLLMSQVMFKSDR-FLIIPLHSLMPTVNQTQVFKK---TPPGVRKIVIA 664
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 665 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 702
Score = 42 (19.8 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 443 RAAQEYNEKSQGWIVLPLHSTLSLEEQD---RVFHYAPE 478
RA +E+ + IV LHS + ++D ++ +APE
Sbjct: 197 RAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPE 235
Score = 39 (18.8 bits), Expect = 9.5e-16, Sum P(4) = 9.5e-16
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 289 ERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVL 325
E H+ L G + C L + +AA LS D V+
Sbjct: 813 EPHIGKMILFGALFCCLDPVLTIAAS--LSFKDPFVI 847
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 557 (201.1 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 148/440 (33%), Positives = 232/440 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL-----HSTAEVKIILMSATINIE 364
E D L Y V++LDE HER ++ D L G++K A +K+++ SAT++I+
Sbjct: 172 ESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDID 231
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRT- 423
F YFN K + + GR YP+++ + TK E D YI + + RT
Sbjct: 232 HFGNYFN--CKGMYLEGRTYPVRVMH--------TKEEHED---YIHTVLVTLFHIHRTT 278
Query: 424 -ERGDVLIFMSGISEISSIVRAAQEYNE-KSQGWI---VLPLHSTLSLEEQDRVFHYAPE 478
+ DVLIF++G EI S+ + ++ + + G V L++ LS +Q F P
Sbjct: 279 PKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPA 338
Query: 479 GLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
+RK I++TNIAETSITI GIR V+D G VKE S++ + L+ ISKA A QR GR
Sbjct: 339 NVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGR 398
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G CYR Y++ + A+ + PEI R + S++L L+ + + D F FL+ P
Sbjct: 399 AGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLE 457
Query: 599 ENIESSVRSLTQHGAIDSKER--VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLA 656
+ + S+ +SL GAI + + +T LGR + P+D K+L+ S F ++ +LSL
Sbjct: 458 DGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLV 517
Query: 657 AVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRR 716
+VLS F + + ++ A + +S HGD LT+LN + +L +K K WC
Sbjct: 518 SVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKP----KMWCHDN 573
Query: 717 GIEEQRFYEVTKLRSQFKQV 736
+ + +R Q +++
Sbjct: 574 YLNLRSLTYARNVRRQLREI 593
Score = 225 (84.3 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 48/112 (42%), Positives = 70/112 (62%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQ 87
I + Q SLPV + I+ + V+I +TG GK+TQIPQ+L+ AG+ + I TQ
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
PRR+A I++++RVA E + VGY +RFE TKI F+T+G+LLR+
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRE 172
Score = 154 (59.3 bits), Expect = 1.7e-28, Sum P(4) = 1.7e-28
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G CYR Y++ + A+ + PEI R + S++L L+ + + D F FL+ P +
Sbjct: 401 RDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDG 459
Query: 869 IESSVRSLTQHGAIDSKER--VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ S+ +SL GAI + + +T LGR + P+D K+L+ S F ++ +L L
Sbjct: 460 LRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSL 516
Score = 81 (33.6 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V++LDE HER ++ D L G++K
Sbjct: 176 DRLLLKYSVIILDEAHERTVNADLLFGIVK 205
Score = 76 (31.8 bits), Expect = 7.1e-81, Sum P(4) = 7.1e-81
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y ++ILDE HER + D L G++
Sbjct: 176 DRLLLKYSVIILDEAHERTVNADLLFGIV 204
Score = 54 (24.1 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 1030 GAIDSKER--VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVH 1081
GAI + + +T LGR + P+D K+L+ S F ++ +L L L+ H
Sbjct: 471 GAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDH 524
Score = 51 (23.0 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 930 GAIDSKER--VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
GAI + + +T LGR + P+D K+L+ S F ++ +L L
Sbjct: 471 GAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSL 516
Score = 51 (23.0 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 980 GAIDSKER--VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
GAI + + +T LGR + P+D K+L+ S F ++ +L L
Sbjct: 471 GAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSL 516
Score = 42 (19.8 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1304 LLFSSAIHTNSDFTRLVFD---SWIEVFVP 1330
+LF+ + T F R V + WI+ VP
Sbjct: 657 ILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
Score = 39 (18.8 bits), Expect = 8.1e-17, Sum P(4) = 8.1e-17
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 1124 SYDVLVLDEIHERHLHGDFLLGVIKCL--LHSTAEVK---IILMSATINIELFHTYFNRI 1178
+Y V V+ H + H D++ V+ L +H T +I ++ IE ++
Sbjct: 248 TYPVRVM---HTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQL 304
Query: 1179 AKDLLSGST 1187
AK +G+T
Sbjct: 305 AKIDTTGTT 313
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 612 (220.5 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 170/516 (32%), Positives = 268/516 (51%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D LSS +VLDEIHER+L D L+ VIK LLH ++ ++ + E
Sbjct: 313 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGN 372
Query: 332 ----HLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF-----NRIAK-----II 377
H+ G F V++ LL E + F F NR K I
Sbjct: 373 CPMIHIPG-FTFPVVEYLLEDIIEKIRYFPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIY 431
Query: 378 KV--PGRLYPIQLEYHP--IVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K P + +Q Y I L+ +K+D I ++I E G +L+F+
Sbjct: 432 KERWPAYIKELQTRYSASTIDVLEMMDDDKVDLN---LIAALIRYIVLEEEDGAILVFLP 488
Query: 434 GISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
G IS++ + KS ++++PLHS + Q +VF P G+RK +++TNIAET
Sbjct: 489 GWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAET 548
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
SITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 549 SITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN 608
Query: 553 EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQ 610
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S++ L +
Sbjct: 609 GLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLME 668
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF
Sbjct: 669 LSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG 728
Query: 671 RDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTK 728
++ + RKEL + D LTV+NA++ W K+ R +K +C + +
Sbjct: 729 KEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHN 788
Query: 729 LRSQFKQVLGDSGLITD-IP-GPDASLSS-RERALR 761
++ QF + L +G ++ P P A+++S E+ ++
Sbjct: 789 MKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIK 824
Score = 204 (76.9 bits), Expect = 2.5e-35, Sum P(4) = 2.5e-35
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 597 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSD 656
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 657 EAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 716
Query: 927 LNF 929
L+F
Sbjct: 717 LSF 719
Score = 196 (74.1 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 43/131 (32%), Positives = 79/131 (60%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYL-- 75
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q++
Sbjct: 179 DLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD 238
Query: 76 --VQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
++ G RI CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 239 NYIERGIGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS 298
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 299 ILYCTTGIILQ 309
Score = 159 (61.0 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D+ LSS +VLDEIHER+L D L+ VIK LLH +++K+ILMSAT+N E F YF
Sbjct: 313 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGN 372
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 373 CPMIHIPGFT 382
Score = 106 (42.4 bits), Expect = 3.1e-25, Sum P(4) = 3.1e-25
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 937 RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLS 996
R+ + FLS L +D P + +V S+ H L++L+ A+D +E +T LG L+
Sbjct: 639 RLGGIAYFLSRL-MDPPSDEAVVL-SIKH------LMELS----ALDKQEELTPLGVHLA 686
Query: 997 DLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 687 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 719
Score = 106 (42.4 bits), Expect = 3.1e-25, Sum P(4) = 3.1e-25
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 987 RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLS 1046
R+ + FLS L +D P + +V S+ H L++L+ A+D +E +T LG L+
Sbjct: 639 RLGGIAYFLSRL-MDPPSDEAVVL-SIKH------LMELS----ALDKQEELTPLGVHLA 686
Query: 1047 DLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 687 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 719
Score = 104 (41.7 bits), Expect = 5.0e-25, Sum P(4) = 5.0e-25
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 667 MELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 719
Score = 96 (38.9 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 1168 IELFHTYFNRIAKDLLSGS--TARSHKDVT---------ILKVILASGLYPQVAIGDEFN 1216
+++ H + A+ LL ++RS KD I+K ++ +GLYP+VA N
Sbjct: 783 LQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVA-KIRLN 841
Query: 1217 TSETVKEALFHCKDKGFVSLHPFSVFTSQPD 1247
+ K H K G VS+HP SV Q D
Sbjct: 842 LGKKRKMVKVHTKSDGLVSIHPKSVNVEQTD 872
Score = 83 (34.3 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D+ LSS ++LDE+HER+L D L+ VI LH
Sbjct: 313 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLH 347
Score = 46 (21.3 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ + FL+ L MP + +F T ++V
Sbjct: 487 LPGWDNISTLHDLLMSQVMFKSDR-FLIIPLHSLMPTVNQTQVFKK---TPPGVRKIVIA 542
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 543 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 580
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 637 (229.3 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 155/428 (36%), Positives = 237/428 (55%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L SY V++LDE HER +H D L G++K + E+K+I+ SAT++ F YF + A I
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFK-API 755
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+++ Y E D LD I ++ I ++ P GD+L+F++G
Sbjct: 756 FTIPGRTFPVEVLYTKEPETDY-----LDAS-LITVMQIHLREPP----GDILLFLTGQE 805
Query: 437 EISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAE 491
EI + E KS G I+LP++S L E Q R+F AP G RK +++TNIAE
Sbjct: 806 EIDTACEILYE-RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAE 864
Query: 492 TSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLY 551
TS+TIDGI +VVD G VK+ Y+ M +L IS+A+A+QR GRAGRTGPG YRLY
Sbjct: 865 TSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLY 924
Query: 552 SEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQ 610
+E Y + PEI+R ++ + +L L MG+ D+ F F++APP E++ ++ L
Sbjct: 925 TERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHS 984
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D + +T LGR +++ P++ L KML+ D +L++ ++LSVQ+ F
Sbjct: 985 LSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKD 1044
Query: 671 RDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
+ + + + GD LT+L Y W K+ S WC ++ + +R
Sbjct: 1045 KQALADQKKAKFNQAEGDHLTLLAVYNSW----KNNKFSNAWCYENFVQIRTLKRSQDVR 1100
Query: 731 SQFKQVLG 738
KQ+LG
Sbjct: 1101 ---KQLLG 1105
Score = 238 (88.8 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 55/143 (38%), Positives = 86/143 (60%)
Query: 2 SPALYEEWKLLLRTYLDFKQKEKFS--TLMKIRETQNSLPVAQYKQEIIDTVLKERVVII 59
+P EWK ++ +K F T + + E + SLP+ + + ++I V +++I+
Sbjct: 552 APPEVPEWK----KHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIV 607
Query: 60 AGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQI 116
G+TG GK+TQI QYL + GF +I CTQPRR+A +S++KRVA E + VGY I
Sbjct: 608 IGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTI 667
Query: 117 RFEKHRREKTKIVFITEGLLLRQ 139
RFE +T I ++T+G+LLR+
Sbjct: 668 RFEDCTSPETIIKYMTDGMLLRE 690
Score = 191 (72.3 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG YRLY+E Y + PEI+R ++ + +L L MG+ D+ F F++APP E
Sbjct: 914 RTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVE 973
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
++ ++ L A+D + +T LGR +++ P++ L KML+ D +L +
Sbjct: 974 SLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
Score = 126 (49.4 bits), Expect = 8.9e-22, Sum P(3) = 8.9e-22
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L SY V++LDE HER +H D L G++K + E+K+I+ SAT++ F YF +
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIF 756
Query: 1182 LLSGST 1187
+ G T
Sbjct: 757 TIPGRT 762
Score = 85 (35.0 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
L SY V++LDE HER +H D L G++K + E+
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPEL 732
Score = 72 (30.4 bits), Expect = 4.9e-80, Sum P(4) = 4.9e-80
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L SY +++LDE HER ++ D L G++
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLL 722
Score = 63 (27.2 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 920 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++ L+ + A+D + +T LGR +++ P++ L KML+ D +L +
Sbjct: 976 VMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
Score = 63 (27.2 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 970 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++ L+ + A+D + +T LGR +++ P++ L KML+ D +L +
Sbjct: 976 VMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
Score = 63 (27.2 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 1020 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++ L+ + A+D + +T LGR +++ P++ L KML+ D +L +
Sbjct: 976 VMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
Score = 39 (18.8 bits), Expect = 2.1e-81, Sum P(4) = 2.1e-81
Identities = 11/54 (20%), Positives = 28/54 (51%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRL 1319
P + + + + ++Y L++T+K ++ + + L+ F+ + SD T+L
Sbjct: 1158 PSSALFNRQPEWVIYHELVQTTKEYMREVTTIDP-KWLVEFAPSFFRFSDPTKL 1210
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 568 (205.0 bits), Expect = 3.3e-81, Sum P(3) = 3.3e-81
Identities = 144/433 (33%), Positives = 233/433 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D LS Y L+LDE HER L D LLG +K ++ +++I+MSAT+N E F +
Sbjct: 200 ELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEF 259
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A+I + GR YP+Q+ Y E D LD +R + + K P GD+L
Sbjct: 260 FDG-AEICYISGRQYPVQIHYTYTPEPDY-----LDA--CLRTIFQLHTKLPP---GDIL 308
Query: 430 IFMSGISEISSIVRAAQEYNEKSQGWI----VLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI ++ + Y+++ + PL ++L E+Q +VF A RK ++
Sbjct: 309 VFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVL 368
Query: 486 STNIAETSITIDGIRFVVDSG--KVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
STNIAETS+TI GIR+V+D+G K+K+ + + + T+Q IS+++A QR GRAGR
Sbjct: 369 STNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQP--ISQSAAMQRSGRAGREA 426
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYR+Y+E + L + + PEI+R+ + +L+L G DV F +++ P E +
Sbjct: 427 AGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLR 486
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ L GA+D + LG +S +P+ L + ++ + + V+ + + LS S
Sbjct: 487 ALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDS 546
Query: 664 PFT-NRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
F + RD E K L S GD LT LNA +++L D K+WC + I +
Sbjct: 547 MFLFPQEKRDEAIEARLKFLHSE-GDLLTCLNALRQYLESSHDS--RKQWCSQNFINRRA 603
Query: 723 FYEVTKLRSQFKQ 735
+ +R Q ++
Sbjct: 604 LKTILDIRKQLRE 616
Score = 232 (86.7 bits), Expect = 3.3e-81, Sum P(3) = 3.3e-81
Identities = 51/131 (38%), Positives = 80/131 (61%)
Query: 20 KQKEKFSTLMK-IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
K+ E + K I E + +LP+ + + + RV+++ G+TG GKSTQIPQ+L +
Sbjct: 77 KRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNEC 136
Query: 79 GFQRIAC---TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
+ + C TQPRR+A ++L+KRVA E + VGY IRF+ +KT+I ++T+G+
Sbjct: 137 PYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGM 196
Query: 136 LLRQDSGLITD 146
LLR+ LI D
Sbjct: 197 LLRE---LIND 204
Score = 143 (55.4 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G CYR+Y+E + L + + PEI+R+ + +L+L G DV F +++ P E
Sbjct: 424 REAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEG 483
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
+ ++ L GA+D + LG +S +P+
Sbjct: 484 LLRALEHLYSIGALDDNGHINDLGYQMSLIPL 515
Score = 134 (52.2 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D LS Y L+LDE HER L D LLG +K ++ +++I+MSAT+N E F +F+
Sbjct: 204 DPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGA 263
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 264 EICYISG 270
Score = 82 (33.9 bits), Expect = 3.3e-81, Sum P(3) = 3.3e-81
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D LS Y L+LDE HER L D LLG +K ++
Sbjct: 204 DPILSQYHTLILDEAHERTLMTDMLLGFVKKII 236
Score = 81 (33.6 bits), Expect = 4.2e-81, Sum P(3) = 4.2e-81
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D LS Y LILDE HER L D LLG +
Sbjct: 200 ELINDPILSQYHTLILDEAHERTLMTDMLLGFV 232
Score = 46 (21.3 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 327 EIHERHLHGDFLLGVIK--CLLHSTAEVKIILMSATINIELFHTYFNRIAKII 377
E++ +L FL G I LLH + I+ + TI+I + F + + I
Sbjct: 630 EVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAI 682
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPV 950
L+ + GA+D + LG +S +P+
Sbjct: 488 LEHLYSIGALDDNGHINDLGYQMSLIPL 515
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPV 1000
L+ + GA+D + LG +S +P+
Sbjct: 488 LEHLYSIGALDDNGHINDLGYQMSLIPL 515
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPV 1050
L+ + GA+D + LG +S +P+
Sbjct: 488 LEHLYSIGALDDNGHINDLGYQMSLIPL 515
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 636 (228.9 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 155/449 (34%), Positives = 244/449 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS Y +++LDE HER +H D L G++K E+K+I+ SAT++ F Y
Sbjct: 644 ECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEY 703
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR +P+++ Y +S+ L+ +I ++ I + P GDVL
Sbjct: 704 FLE-APIFTIPGRTFPVEILY-----TREPESDYLEAA-HITVMQIHLTEPP----GDVL 752
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++ L E Q R+F AP G RK +
Sbjct: 753 VFLTGQEEIDTSCEVLYE-RMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVV 811
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + M +L IS+A+A+QR GRAGRTGP
Sbjct: 812 IATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGP 871
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E + + PEI+R ++ S LL L MG+ ++ F F++APP +++ +
Sbjct: 872 GKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMIT 931
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ +L A+D +T LGR +++ P++ L K+L+ + VL++ A+L+VQ+
Sbjct: 932 ALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN 991
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S+ WC I+ +
Sbjct: 992 IFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSW----KNHHFSQPWCFENFIQVRSM 1047
Query: 724 YEVTKLRSQFKQVLGDSGLITDIPGPDAS 752
+R Q ++ L+ G D S
Sbjct: 1048 KRAQDIRKQLLGIMDRHKLLMVSCGRDVS 1076
Score = 234 (87.4 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 46/116 (39%), Positives = 77/116 (66%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---I 83
T + + E + SLP+ K+ +++ ++ +++++ G+TG GK+TQ+ QY ++AG R I
Sbjct: 529 TNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKI 588
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++KRVA E + VGY IRFE + T I ++T+G+LLR+
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRE 644
Score = 187 (70.9 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 37/102 (36%), Positives = 64/102 (62%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E + + PEI+R ++ S LL L MG+ ++ F F++APP +
Sbjct: 868 RTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLD 927
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
++ +++ +L A+D +T LGR +++ P++ L K+L+
Sbjct: 928 SMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 122 (48.0 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D LS Y +++LDE HER +H D L G++K E+K+I+ SAT++ F YF
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYF 704
Score = 81 (33.6 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
LS Y +++LDE HER +H D L G++K E+
Sbjct: 651 LSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPEL 686
Score = 72 (30.4 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS Y +++LDE HER ++ D L G++
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLL 676
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 636 (228.9 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 155/449 (34%), Positives = 244/449 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS Y +++LDE HER +H D L G++K E+K+I+ SAT++ F Y
Sbjct: 644 ECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEY 703
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F A I +PGR +P+++ Y +S+ L+ +I ++ I + P GDVL
Sbjct: 704 FLE-APIFTIPGRTFPVEILY-----TREPESDYLEAA-HITVMQIHLTEPP----GDVL 752
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E KS G I+LP++ L E Q R+F AP G RK +
Sbjct: 753 VFLTGQEEIDTSCEVLYE-RMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVV 811
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ Y+ + M +L IS+A+A+QR GRAGRTGP
Sbjct: 812 IATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGP 871
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E + + PEI+R ++ S LL L MG+ ++ F F++APP +++ +
Sbjct: 872 GKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMIT 931
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ +L A+D +T LGR +++ P++ L K+L+ + VL++ A+L+VQ+
Sbjct: 932 ALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN 991
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
F + + + + GD LT+L Y W K+ S+ WC I+ +
Sbjct: 992 IFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSW----KNHHFSQPWCFENFIQVRSM 1047
Query: 724 YEVTKLRSQFKQVLGDSGLITDIPGPDAS 752
+R Q ++ L+ G D S
Sbjct: 1048 KRAQDIRKQLLGIMDRHKLLMVSCGRDVS 1076
Score = 234 (87.4 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 46/116 (39%), Positives = 77/116 (66%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---I 83
T + + E + SLP+ K+ +++ ++ +++++ G+TG GK+TQ+ QY ++AG R I
Sbjct: 529 TNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKI 588
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++KRVA E + VGY IRFE + T I ++T+G+LLR+
Sbjct: 589 GCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRE 644
Score = 187 (70.9 bits), Expect = 4.7e-32, Sum P(3) = 4.7e-32
Identities = 37/102 (36%), Positives = 64/102 (62%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E + + PEI+R ++ S LL L MG+ ++ F F++APP +
Sbjct: 868 RTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLD 927
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
++ +++ +L A+D +T LGR +++ P++ L K+L+
Sbjct: 928 SMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 122 (48.0 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D LS Y +++LDE HER +H D L G++K E+K+I+ SAT++ F YF
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYF 704
Score = 81 (33.6 bits), Expect = 3.6e-81, Sum P(3) = 3.6e-81
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
LS Y +++LDE HER +H D L G++K E+
Sbjct: 651 LSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPEL 686
Score = 72 (30.4 bits), Expect = 3.2e-80, Sum P(3) = 3.2e-80
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS Y +++LDE HER ++ D L G++
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLL 676
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+D+M+ L+ A+D +T LGR +++ P++ L K+L+
Sbjct: 926 LDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLI 969
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 583 (210.3 bits), Expect = 6.1e-81, Sum P(3) = 6.1e-81
Identities = 151/443 (34%), Positives = 233/443 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ LS Y ++LDE HER + D L+G++K ++ ++KII+MSAT++ + F Y
Sbjct: 205 EAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRY 264
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR-ILSIIDKKYPRTERGDV 428
FN A ++ VPGR +P+++ Y P E D ++ IR +L I + + GD+
Sbjct: 265 FND-APLLAVPGRTHPVEIFYTPEPEQDYVEAA-------IRTVLQI----HATEDEGDI 312
Query: 429 LIFMSGISEISSIVRAA-----QEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPE---- 478
L+F++G EI R + E G + V L+ +L Q R+F AP
Sbjct: 313 LLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRP 372
Query: 479 -GL--RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQR 535
G RK IVSTNIAETS+TIDGI +VVD G K+ Y+ ++ +L ISKASA+QR
Sbjct: 373 GGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQR 432
Query: 536 KGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLE 594
GRAGRT PG C+RLY+E + L + + PEI R ++ S +L L +G+ D+ F ++
Sbjct: 433 AGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMD 492
Query: 595 APPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLS 654
P E + ++ L +D +T LGR S+ P+D L ML+ F+ + +LS
Sbjct: 493 PPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILS 552
Query: 655 LAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCK 714
+ A+LSV F A + + + GD LT+LNAY + + K+WC
Sbjct: 553 ITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQE-NPKQWCH 611
Query: 715 RRGIEEQRFYEVTKLRSQFKQVL 737
+ + +R Q +++
Sbjct: 612 DHFLSLRSLQSADNVRMQLLRIM 634
Score = 218 (81.8 bits), Expect = 6.1e-81, Sum P(3) = 6.1e-81
Identities = 47/126 (37%), Positives = 74/126 (58%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV-- 76
F + S I +T+ LPV + E + + ++++ G+TG GK+TQIPQ+++
Sbjct: 80 FTNRPYSSKYFSILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLD 139
Query: 77 ---QAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITE 133
Q + IACTQPRR+A +S+++RVA E VGY IRFE KT + ++T+
Sbjct: 140 DLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTD 199
Query: 134 GLLLRQ 139
G+LLR+
Sbjct: 200 GMLLRE 205
Score = 164 (62.8 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT PG C+RLY+E + L + + PEI R ++ S +L L +G+ D+ F ++ P E
Sbjct: 438 RTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPE 497
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L +D +T LGR S+ P+D L ML+ F+ + +L + L
Sbjct: 498 TLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALL 557
Query: 928 N 928
+
Sbjct: 558 S 558
Score = 138 (53.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVAA-DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R E M + + + D ++ A D+ LS Y ++LDE HER + D L+G++K ++
Sbjct: 183 RFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQ 242
Query: 1153 STAEVKIILMSATINIELFHTYFN 1176
++KII+MSAT++ + F YFN
Sbjct: 243 RRPDLKIIIMSATLDAQKFQRYFN 266
Score = 78 (32.5 bits), Expect = 6.1e-81, Sum P(3) = 6.1e-81
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D+ LS Y ++LDE HER + D L+G++K
Sbjct: 209 DHELSRYSTIILDEAHERTMSTDVLMGLLK 238
Score = 73 (30.8 bits), Expect = 2.0e-80, Sum P(3) = 2.0e-80
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D+ LS Y +ILDE HER + D L+G++
Sbjct: 205 EAMNDHELSRYSTIILDEAHERTMSTDVLMGLL 237
Score = 63 (27.2 bits), Expect = 4.6e-18, Sum P(3) = 4.6e-18
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 927 LNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
LN+ A +D +T LGR S+ P+D L ML+ F+ + +L + L+
Sbjct: 506 LNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLS 558
Score = 63 (27.2 bits), Expect = 4.6e-18, Sum P(3) = 4.6e-18
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 977 LNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
LN+ A +D +T LGR S+ P+D L ML+ F+ + +L + L+
Sbjct: 506 LNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLS 558
Score = 63 (27.2 bits), Expect = 4.6e-18, Sum P(3) = 4.6e-18
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 1027 LNFGA-IDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
LN+ A +D +T LGR S+ P+D L ML+ F+ + +L + L+
Sbjct: 506 LNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLS 558
Score = 39 (18.8 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 258 VISPPLHCGGEIVAADYFLSSYDVLV 283
+ SP +C EI++ LS + V
Sbjct: 539 ISSPEFYCSNEILSITALLSVPQIFV 564
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 633 (227.9 bits), Expect = 6.9e-81, Sum P(4) = 6.9e-81
Identities = 152/434 (35%), Positives = 240/434 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS Y V++LDE HER + D L G++K + ++K+I+ SAT++ E F +Y
Sbjct: 615 ECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSY 674
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F + I +PGR YP+++ Y E D LD + ++ I + P GD+L
Sbjct: 675 FYK-CPIFTIPGRSYPVEIMYTKQPEADY-----LDAA-LMTVMQIHLSEGP----GDIL 723
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI + E K G ++LP++S L E Q R+F AP G RK +
Sbjct: 724 VFLTGQEEIDTSCEILYE-RSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVV 782
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETS+TIDGI +VVD G VK+ +D M +L IS+A A QR GRAGRTGP
Sbjct: 783 IATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGP 842
Query: 545 GVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y + + PEI+R ++ +L L MG+ D+ F F++ PPA+ + +
Sbjct: 843 GKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIA 902
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++++L A+D + +T LGR ++D P++ L K+L+ + +LS+ A+LSV +
Sbjct: 903 ALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPN 962
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRF 723
++ + + + R + + D LT+LN Y W K +R S WC I+ +
Sbjct: 963 IWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTW---KMNRC-SDNWCYEHYIQARGM 1018
Query: 724 YEVTKLRSQFKQVL 737
+R Q +++
Sbjct: 1019 RRAEDVRKQLIRLM 1032
Score = 240 (89.5 bits), Expect = 6.9e-81, Sum P(4) = 6.9e-81
Identities = 46/117 (39%), Positives = 77/117 (65%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QR 82
T + ++E + LPV + +++ ++ V K +++++ G+TG GK+TQI QYL + G+ +
Sbjct: 499 TTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKM 558
Query: 83 IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I CTQPRR+A +S++KRVA E + VGY IRFE T+I ++T+G+L R+
Sbjct: 559 IGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRE 615
Score = 197 (74.4 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 44/130 (33%), Positives = 75/130 (57%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y + + PEI+R ++ +L L MG+ D+ F F++ PPA+
Sbjct: 839 RTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQ 898
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ +++++L A+D + +T LGR ++D P++ L K+L+ + ML + L
Sbjct: 899 TMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAML 958
Query: 928 NFGAIDSKER 937
+ I S+ R
Sbjct: 959 SVPNIWSRPR 968
Score = 77 (32.2 bits), Expect = 6.9e-81, Sum P(4) = 6.9e-81
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D LS Y V++LDE HER + D L G++K
Sbjct: 619 DPLLSKYSVIILDEAHERTVATDVLFGLLK 648
Score = 76 (31.8 bits), Expect = 8.8e-81, Sum P(4) = 8.8e-81
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 225 QVQVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q + D LS Y ++ILDE HER + D L G++
Sbjct: 613 QRECLVDPLLSKYSVIILDEAHERTVATDVLFGLL 647
Score = 60 (26.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
A+D + +T LGR ++D P++ L K+L+ + ML + L+ I S+ R
Sbjct: 912 ALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPR 968
Score = 60 (26.2 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
A+D + +T LGR ++D P++ L K+L+ + ML + L+ I S+ R
Sbjct: 912 ALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPR 968
Score = 58 (25.5 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
A+D + +T LGR ++D P++ L K+L+
Sbjct: 912 ALDDEGLLTPLGRKMADFPMEPQLSKVLI 940
Score = 41 (19.5 bits), Expect = 6.9e-81, Sum P(4) = 6.9e-81
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
IV+ P P + + ++Y L++TSK ++
Sbjct: 1074 IVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYM 1109
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 74 YLVQAGFQRIACTQPR 89
Y+V GF + +C P+
Sbjct: 799 YVVDPGFVKQSCFDPK 814
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 633 (227.9 bits), Expect = 8.5e-81, Sum P(3) = 8.5e-81
Identities = 154/435 (35%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L Y V++LDE HER + D L ++K ++KII+ SAT++ + F Y
Sbjct: 646 EIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAY 705
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI-IDKKYPRTERGDV 428
FN I +PGR +P+++ Y E S+ LD ++ I ID+ P GD+
Sbjct: 706 FNE-CPIFTIPGRTFPVEILYSKDPE-----SDYLDAA-LTTVMQIHIDEP-P----GDI 753
Query: 429 LIFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
L+F++G EI + E K+ G I+LP++S L E Q R+F AP G RK
Sbjct: 754 LLFLTGQEEIDTSCEILFE-RMKALGPSVPELIILPVYSALPNEMQSRIFDPAPPGSRKV 812
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
+++TNIAETSITID I +VVD G VK+ +YD M +L IS+A A QR GRAGRTG
Sbjct: 813 VIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTG 872
Query: 544 PGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIE 602
PG C+RLY+E Y + S PEI+R ++ + +L L MG+ D+ F F++ PP +
Sbjct: 873 PGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTML 932
Query: 603 SSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQ 662
+++ L A+D + +T LGR ++D P++ L K+L+ D +LS+ A+L++
Sbjct: 933 TALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAMLNLP 992
Query: 663 SPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
+ F + + + + +GD LT+LN Y W K+ R SK WC I+ +
Sbjct: 993 NVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAW---KQSRY-SKPWCAENFIQFRA 1048
Query: 723 FYEVTKLRSQFKQVL 737
+R+Q ++++
Sbjct: 1049 LTRARDVRNQIERIM 1063
Score = 250 (93.1 bits), Expect = 8.5e-81, Sum P(3) = 8.5e-81
Identities = 49/116 (42%), Positives = 78/116 (67%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---I 83
T M I++ + SLPV +++++I V + +++I+ G+TG GK+TQ+ QYL +AGF I
Sbjct: 531 TNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVI 590
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++KRV+ E + VGY IRFE T+I ++T+G+L R+
Sbjct: 591 GCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQRE 646
Score = 195 (73.7 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 42/121 (34%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY+E Y + S PEI+R ++ + +L L MG+ D+ F F++ PP
Sbjct: 870 RTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPIN 929
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ +++ L A+D + +T LGR ++D P++ L K+L+ D ML + L
Sbjct: 930 TMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVAML 989
Query: 928 N 928
N
Sbjct: 990 N 990
Score = 118 (46.6 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 1113 QVQVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFH 1172
Q ++ D L Y V++LDE HER + D L ++K ++KII+ SAT++ + F
Sbjct: 644 QREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFS 703
Query: 1173 TYFNRIAKDLLSGST 1187
YFN + G T
Sbjct: 704 AYFNECPIFTIPGRT 718
Score = 78 (32.5 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 1017 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1075
I+TML L+ A+D + +T LGR ++D P++ L K+L+ D ML +
Sbjct: 928 INTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVA 987
Query: 1076 ALNFVHHSXXXXXXXAGERLESMDANEVEFRLKHDP 1111
LN + E+ DA + +F HDP
Sbjct: 988 MLNLPN-----VFYRPKEKQTQADAKKAKF---HDP 1015
Score = 74 (31.1 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 917 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 975
I+TML L+ A+D + +T LGR ++D P++ L K+L+ D ML +
Sbjct: 928 INTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVA 987
Query: 976 ALN 978
LN
Sbjct: 988 MLN 990
Score = 74 (31.1 bits), Expect = 2.0e-20, Sum P(3) = 2.0e-20
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 967 IDTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1025
I+TML L+ A+D + +T LGR ++D P++ L K+L+ D ML +
Sbjct: 928 INTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEMLSIVA 987
Query: 1026 ALN 1028
LN
Sbjct: 988 MLN 990
Score = 65 (27.9 bits), Expect = 8.5e-81, Sum P(3) = 8.5e-81
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 268 EIVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
EIV D L Y V++LDE HER + D L ++K
Sbjct: 646 EIVI-DPDLKRYSVIMLDEAHERTIATDVLFALLK 679
Score = 64 (27.6 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 225 QVQVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q ++ D L Y +++LDE HER + D L ++
Sbjct: 644 QREIVIDPDLKRYSVIMLDEAHERTIATDVLFALL 678
Score = 45 (20.9 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 418 KKYPRTERGDVL-IFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQD 470
K+ ER ++ + SG+++ S ++YN G + L + +E +D
Sbjct: 362 KRMTSPERWEIRQMIASGVAKASDYPELEEDYNNALSGEGQMELEEDVDIEIRD 415
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 648 (233.2 bits), Expect = 9.7e-81, Sum P(4) = 9.7e-81
Identities = 161/459 (35%), Positives = 247/459 (53%)
Query: 300 VIKCLLHSTVEVAA--DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
VIK + +E A D ++ Y V++LDE HER + D L ++K +K+I+
Sbjct: 432 VIKYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVT 491
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRI-LSII 416
SAT++ F YFN II +PGR +P+++ Y TK+ ++D Y+ L +
Sbjct: 492 SATLDSNKFSRYFNN-CPIITIPGRTFPVEVLY--------TKAPEMD---YLAAALESV 539
Query: 417 DKKYPRTERGDVLIFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRV 472
+ + GD+L+F++G EI + A E E I+LP++S L E Q R+
Sbjct: 540 IQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRI 599
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F P G RK I++TNIAETSITIDGI +VVD G VK YD M +L+ ISKA A
Sbjct: 600 FEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQA 659
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
QR GRAGRTGPG CYRLY+E+ Y + + PEI+R ++ +L L MG+ D+ F
Sbjct: 660 NQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFE 719
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
F++ P + +++ L A+D +T+LGR ++DLP++ L K L+ + +
Sbjct: 720 FMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEE 779
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+LS+ A+LSVQ+ F + + + + GD LT+LN ++ W ++ SK
Sbjct: 780 ILSIVAMLSVQTIFYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWC---RNNY-SKT 835
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
WC+ I+E+ ++R Q K ++ G T G D
Sbjct: 836 WCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCGND 874
Score = 218 (81.8 bits), Expect = 9.7e-81, Sum P(4) = 9.7e-81
Identities = 46/120 (38%), Positives = 73/120 (60%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---- 82
T + I+E + LPV + ++++ + + V+I G+TG GK+TQI QY+ + G +
Sbjct: 325 TSLPIQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQ 384
Query: 83 ---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I CTQPRR+A S++KRV+ E + + VGY IRFE E T I ++T+G+L R+
Sbjct: 385 TKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLERE 444
Score = 184 (69.8 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
Identities = 38/102 (37%), Positives = 61/102 (59%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E+ Y + + PEI+R ++ +L L MG+ D+ F F++ P
Sbjct: 668 RTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTT 727
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L A+D +TTLGR ++DLP++ L K L+
Sbjct: 728 TMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLI 769
Score = 105 (42.0 bits), Expect = 6.7e-19, Sum P(3) = 6.7e-19
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D ++ Y V++LDE HER + D L ++K +K+I+ SAT++ F YFN
Sbjct: 448 DPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNC 507
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 508 PIITIPGRT 516
Score = 66 (28.3 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 919 TML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
TML L DL + A+D +T+LGR ++DLP++ L K L+
Sbjct: 728 TMLTALEDLYI-LDALDDDGNLTTLGRKMADLPMEPALAKTLI 769
Score = 66 (28.3 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 969 TML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
TML L DL + A+D +T+LGR ++DLP++ L K L+
Sbjct: 728 TMLTALEDLYI-LDALDDDGNLTTLGRKMADLPMEPALAKTLI 769
Score = 66 (28.3 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 1019 TML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
TML L DL + A+D +T+LGR ++DLP++ L K L+
Sbjct: 728 TMLTALEDLYI-LDALDDDGNLTTLGRKMADLPMEPALAKTLI 769
Score = 61 (26.5 bits), Expect = 1.6e-28, Sum P(4) = 1.6e-28
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
++ Y V++LDE HER + D L ++K
Sbjct: 451 MNRYSVIMLDEAHERTIATDVLFALLK 477
Score = 58 (25.5 bits), Expect = 9.7e-81, Sum P(4) = 9.7e-81
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D ++ Y +++LDE HER + D L ++
Sbjct: 444 EALNDPNMNRYSVIMLDEAHERTIATDVLFALL 476
Score = 49 (22.3 bits), Expect = 9.7e-81, Sum P(4) = 9.7e-81
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCL 1295
P ++ K Q ++Y +LL TSK ++ +C+
Sbjct: 912 PSSSLYGKKPQYVIYHTLLLTSKEYM-HCV 940
Score = 42 (19.8 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 21/84 (25%), Positives = 42/84 (50%)
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI---EEQRFYEVTK 728
DP +T+ + ++++ DP T + +W KK +++ + KR + E++R V
Sbjct: 287 DPLFQTS-EPVKNSDLDPDTE-SFISKW---KKSN-KTETFGKRTSLPIQEQRRMLPVYA 340
Query: 729 LRSQFKQVLGDSGLITDIPGPDAS 752
+RSQ + + D+ + I G S
Sbjct: 341 MRSQLLEAIRDNQFVV-IVGETGS 363
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 558 (201.5 bits), Expect = 1.0e-80, Sum P(4) = 1.0e-80
Identities = 124/344 (36%), Positives = 200/344 (58%)
Query: 415 IIDKK--YPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEE 468
I+D K YP + G +L+F+ G++EI + Q N +S ++ PLHS+LS EE
Sbjct: 831 IVDGKHSYP-PDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEE 889
Query: 469 QDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWIS 528
Q VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD + M +L++ ++S
Sbjct: 890 QQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVS 949
Query: 529 KASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDV 587
+A+A QRKGRAGR GVC+ L++ ++ L + PEI+RV ++ L L + + +
Sbjct: 950 QANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFST 1009
Query: 588 RKFP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVF 642
+E P A+++ +S L GA+ E +T LG L+ LPVD+ +GK+++F
Sbjct: 1010 HNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLF 1069
Query: 643 GSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LG 701
GS+F +D L++AA L+ +SPF + + + + E + D L +L AYK W L
Sbjct: 1070 GSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLS 1129
Query: 702 VKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
+K+ S +C++ + + E+ L+ QF ++L D G + +
Sbjct: 1130 MKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKE 1173
Score = 229 (85.7 bits), Expect = 1.0e-80, Sum P(4) = 1.0e-80
Identities = 47/131 (35%), Positives = 81/131 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ + + + SLP + ++ I+ + K +V++++G TGCGK+TQIPQ+++
Sbjct: 518 FRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDD 577
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+++A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 578 SLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 637
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 638 TTGVLLRRLEG 648
Score = 170 (64.9 bits), Expect = 1.6e-38, Sum P(4) = 1.6e-38
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ ++ L + PEI+RV ++ L L + + + +E
Sbjct: 962 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIE 1021
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P A+++ +S L GA+ E +T LG L+ LPVD+ +GK+++FGS+F +D L
Sbjct: 1022 PPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1081
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1082 IAASLAF 1088
Score = 165 (63.1 bits), Expect = 1.0e-80, Sum P(4) = 1.0e-80
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ +++ILMSAT+N ELF YFN
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNS- 707
Query: 374 AKIIKVPGRLYPI-QLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER 425
+I +PGR +P+ Q + + R + D PY R + + K+ + R
Sbjct: 708 CPVITIPGRTFPVDQFFLEDAIAVTRYVLQ--DGSPYARSMKQMSKEKLKARR 758
Score = 131 (51.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 1094 RLESMDANEVEFRLKHDPKQV---QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 1150
RLES+ ++ RL + V ++ D L +++DE+HER DFLL V+K +
Sbjct: 623 RLESVKSSAT--RLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDI 680
Query: 1151 LHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGST 1187
+ +++ILMSAT+N ELF YFN + G T
Sbjct: 681 VLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRT 717
Score = 108 (43.1 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ GA+ E +T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1037 DLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1088
Score = 108 (43.1 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ GA+ E +T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1037 DLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1088
Score = 108 (43.1 bits), Expect = 3.8e-32, Sum P(4) = 3.8e-32
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ GA+ E +T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1037 DLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1088
Score = 62 (26.9 bits), Expect = 5.7e-70, Sum P(4) = 5.7e-70
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK--CLLHSTVEV 311
D L +++DE+HER DFLL V+K L T++V
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQV 689
Score = 58 (25.5 bits), Expect = 1.5e-69, Sum P(4) = 1.5e-69
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFLLLVL 677
Score = 52 (23.4 bits), Expect = 1.0e-80, Sum P(4) = 1.0e-80
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
+G A S+ ++ ++ +L + LYP V E F G V + P S
Sbjct: 1195 TGEEANSNAENPKLISAMLCAALYPNVV-------QVKSPEGKFQKTSTGAVRMQPKS-- 1245
Query: 1243 TSQPDVLR-ISEDD--IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPA 1299
D L+ ++++D + P + R+ S LVY ++TS+ F+ +C M +
Sbjct: 1246 ----DELKFVTKNDGYVHIHPSSVNYQVRHFDSP---YLVYHEKIKTSRVFIRDC-SMVS 1297
Query: 1300 LQTLLLFSSA-IHTN---SDFTRLVFDSWI 1325
+ L+LF ++ +F + D WI
Sbjct: 1298 VYPLVLFGGGQVNVQLQKGEFVVSLDDGWI 1327
Score = 40 (19.1 bits), Expect = 1.1e-67, Sum P(4) = 1.1e-67
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 659 IVDEVHERTEESDFLLLV 676
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 557 (201.1 bits), Expect = 1.2e-80, Sum P(4) = 1.2e-80
Identities = 129/345 (37%), Positives = 198/345 (57%)
Query: 424 ER-GDVLIFMSGISEISSIVRAAQEYN--EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
ER G VL+FM+G +I+S+ + ++ ++L H +++ EQ +F PEG+
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGI 635
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK +++TN+AETSITI+ + +V+D GK KE SYD L WISKA+A QR+GRAG
Sbjct: 636 RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAG 695
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 598
R PG CY LY Y A+Y PE+ R + SL L + +GLG + +F L+ P A
Sbjct: 696 RVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEA 755
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
+++++V L GA+D E +T LG+ LS LPV+ LGKML+ G++F+ +D V+++ A
Sbjct: 756 LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 815
Query: 659 LSVQSPFTNRAFRDPD-CETARKELES-NHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRR 716
LSV+ PF F D ETAR + ++ D LT++ AY W ++ +C +
Sbjct: 816 LSVRDPFL-MPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTH-SGYDYCWKN 873
Query: 717 GIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALR 761
+ Q + +R QF +L ++ LI +I G + LS E +R
Sbjct: 874 FLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGC-SKLSHDEHLVR 917
Score = 229 (85.7 bits), Expect = 1.2e-80, Sum P(4) = 1.2e-80
Identities = 45/112 (40%), Positives = 73/112 (65%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-------IACTQ 87
+ +LP + K ++ + +VV+++G+TGCGK+TQ+PQY++++ + I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
PRRI+ IS+S+RVA E Q VGY++R E R T+++F T G+LLR+
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRR 407
Score = 214 (80.4 bits), Expect = 7.4e-43, Sum P(4) = 7.4e-43
Identities = 46/122 (37%), Positives = 72/122 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY Y A+Y PE+ R + SL L + +GLG + +F L+ P A
Sbjct: 696 RVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEA 755
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+++++V L GA+D E +T LG+ LS LPV+ LGKML+ G++F+ +D ++ +
Sbjct: 756 LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAG 815
Query: 927 LN 928
L+
Sbjct: 816 LS 817
Score = 162 (62.1 bits), Expect = 1.2e-80, Sum P(4) = 1.2e-80
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +V+DEIHER ++ DFLL V+K LL ++K+ILMSAT+N ELF +YF
Sbjct: 411 DRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGG- 469
Query: 374 AKIIKVPGRLYPIQLEY 390
A + +PG YP++ +
Sbjct: 470 APAMHIPGFTYPVRAHF 486
Score = 144 (55.7 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 45/124 (36%), Positives = 64/124 (51%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L +V+DEIHER ++ DFLL V+K LL ++K+ILMSAT+N ELF +Y
Sbjct: 407 RLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSY 466
Query: 1175 FNRIAKDLLSGST--ARSHKDVTILKVI-LASGLYPQVAIGDEFNTSETVKEALFHCKDK 1231
F + G T R+H L+ Y Q+ E T + K+A F K K
Sbjct: 467 FGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFK-KRK 525
Query: 1232 GFVS 1235
+S
Sbjct: 526 SLIS 529
Score = 104 (41.7 bits), Expect = 1.6e-31, Sum P(4) = 1.6e-31
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
GA+D E +T LG+ LS LPV+ LGKML+ G++F+ +D ++ + L+
Sbjct: 769 GALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS 817
Score = 104 (41.7 bits), Expect = 1.6e-31, Sum P(4) = 1.6e-31
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
GA+D E +T LG+ LS LPV+ LGKML+ G++F+ +D ++ + L+
Sbjct: 769 GALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS 817
Score = 104 (41.7 bits), Expect = 1.6e-31, Sum P(4) = 1.6e-31
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
GA+D E +T LG+ LS LPV+ LGKML+ G++F+ +D ++ + L+
Sbjct: 769 GALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS 817
Score = 71 (30.1 bits), Expect = 3.7e-71, Sum P(4) = 3.7e-71
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L +V+DEIHER ++ DFLL V+K LL
Sbjct: 411 DRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLL 443
Score = 59 (25.8 bits), Expect = 6.7e-70, Sum P(4) = 6.7e-70
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L +++DE+HER + DFLL V+
Sbjct: 407 RLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVL 439
Score = 50 (22.7 bits), Expect = 1.2e-80, Sum P(4) = 1.2e-80
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVA--IGDEFN-TSETVKEA---LFHCKDKGFV 1234
D + G + SH D +++ I+ +G++P V + E + T +T+++ L+ G V
Sbjct: 901 DNIEGCSKLSH-DEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNV 959
Query: 1235 SLHPF 1239
+ PF
Sbjct: 960 PMIPF 964
Score = 38 (18.4 bits), Expect = 1.5e-15, Sum P(4) = 1.5e-15
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 306 HSTVEVAADNFLSSYDVLVLDEIHER 331
HS + NFLSS + +D + ++
Sbjct: 864 HSGYDYCWKNFLSSQTLKAMDSMRKQ 889
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 584 (210.6 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 137/435 (31%), Positives = 235/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D LS Y ++++DE HER L+ DF+LG++K +L + +I++ SATIN +F Y
Sbjct: 111 EMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRY 170
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
FN +IK+ YP+ + + P T +++ + +I+ I+++ ++G +L
Sbjct: 171 FNE-CPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAIL 229
Query: 430 IFMSGISEISS-IVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
IF+ G I + I R + E + +LPL+ LS EEQ++VF+ AP G RK +++TN
Sbjct: 230 IFLPGERSIKNCITRLSHE--RWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATN 287
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
IAETSITID + V+DSG VK SY+ + ++L E IS+AS QR+GRAGR G CY
Sbjct: 288 IAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCY 347
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLYS + + Y+ EI R + +++ + +G+ D F F+ P I + +L
Sbjct: 348 RLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTL 407
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLV--FGSMFHQIDTVLSLAAVLSVQSPFT 666
GA++ ++ +G+ + P+ +M+V H ID VL AA LS +SP
Sbjct: 408 RLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLI 467
Query: 667 NRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEV 726
++ + A GD ++ L Y+ + +++ S +C+ ++E+ E+
Sbjct: 468 FSEDQEEKTKKAHGTFSDPMGDFVSFLRIYRAY--AQENNKHS--FCQHFYLDERIMAEI 523
Query: 727 TKLRSQFKQVLGDSG 741
+ ++ Q + ++ G
Sbjct: 524 SNIKEQLELIVSGMG 538
Score = 205 (77.2 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 42/105 (40%), Positives = 66/105 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRIACI 94
LPV K +I+ + V+++ TG GK+TQ+P L +AG+ I TQPRRIA +
Sbjct: 7 LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVL 66
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
S+S+ +A + L +VGY++RFE H +TKI +T+G+LL++
Sbjct: 67 SVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQE 111
Score = 150 (57.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 1092 GERLESMDANEVEFRLK--HDPKQVQ-VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK 1148
G ++ D +VE ++K D +Q + D LS Y ++++DE HER L+ DF+LG++K
Sbjct: 85 GYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLLK 144
Query: 1149 CLLHSTAEVKIILMSATINIELFHTYFN 1176
+L + +I++ SATIN +F YFN
Sbjct: 145 RVLQQRHDFRIVISSATINTAMFSRYFN 172
Score = 128 (50.1 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G CYRLYS + + Y+ EI R + +++ + +G+ D F F+ P
Sbjct: 340 RVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHG 399
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV--FGSMFHQIDTMLL 922
I + +L GA++ ++ +G+ + P+ +M+V H ID +L+
Sbjct: 400 IIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLI 455
Score = 87 (35.7 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D LS Y ++++DE HER L+ DF+LG++K +L
Sbjct: 115 DPLLSKYSIIMVDEAHERSLNIDFILGLLKRVL 147
Score = 84 (34.6 bits), Expect = 2.7e-61, Sum P(2) = 2.7e-61
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 211 DANEVEFRLK--HDPKQVQ-VATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
D +VE ++K D +Q + D LS Y I+++DE HER L DF+LG++
Sbjct: 92 DHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIMVDEAHERSLNIDFILGLL 143
Score = 39 (18.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV--FGSMFHQIDTMLL 972
GA++ ++ +G+ + P+ +M+V H ID +L+
Sbjct: 411 GALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLI 455
Score = 39 (18.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV--FGSMFHQIDTMLL 1022
GA++ ++ +G+ + P+ +M+V H ID +L+
Sbjct: 411 GALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLI 455
Score = 39 (18.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV--FGSMFHQIDTMLL 1072
GA++ ++ +G+ + P+ +M+V H ID +L+
Sbjct: 411 GALEDDRSLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLI 455
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 527 (190.6 bits), Expect = 1.3e-80, Sum P(5) = 1.3e-80
Identities = 120/331 (36%), Positives = 184/331 (55%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYN--EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
G +L+F++G EIS ++ N S ++VLPLH ++ Q +F P RK
Sbjct: 504 GAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKI 563
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
+++TNIAE+SITID + +VVD GK KE SYD K++ L WISKASA QR+GRAGR
Sbjct: 564 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQ 623
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENI 601
GVCYRLY + Y +Y PEI R + L L + + +G + F L+ P A +
Sbjct: 624 AGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAV 683
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
E+++ L GA++ E +T LGR L LPVD +GKML+ G++F ++ L++AA L+
Sbjct: 684 ENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAY 743
Query: 662 QSPFTNRAFRDPDCETARKELESNH-GDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEE 720
+SPF R + + A++ + D + +L AY+ + K+ K +C + +
Sbjct: 744 RSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGG-NEKDFCWQNFLSP 802
Query: 721 QRFYEVTKLRSQFKQVLGDSGLITDIPGPDA 751
+ +R+QF +L D G + D P+A
Sbjct: 803 VTLRMMEDMRNQFLDLLSDIGFV-DKSKPNA 832
Score = 235 (87.8 bits), Expect = 1.3e-80, Sum P(5) = 1.3e-80
Identities = 48/127 (37%), Positives = 78/127 (61%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
K E L RE LP + K+E +++V + +V++++G+TGCGK+TQ+PQ++++
Sbjct: 213 KATESVKALKAFRE---KLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEE 269
Query: 80 FQ-------RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFIT 132
I CTQPRRI+ IS++ R++ E VGYQIR E R ++T+++F T
Sbjct: 270 ISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCT 329
Query: 133 EGLLLRQ 139
G+LLR+
Sbjct: 330 TGVLLRR 336
Score = 196 (74.1 bits), Expect = 1.9e-43, Sum P(5) = 1.9e-43
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R GVCYRLY + Y +Y PEI R + L L + + +G + F L+ P A
Sbjct: 621 RVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDA 680
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+E+++ L GA++ E +T LGR L LPVD +GKML+ G++F ++ L + A
Sbjct: 681 LAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAA 740
Query: 927 LNF 929
L +
Sbjct: 741 LAY 743
Score = 164 (62.8 bits), Expect = 1.3e-80, Sum P(5) = 1.3e-80
Identities = 39/107 (36%), Positives = 64/107 (59%)
Query: 304 LLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINI 363
LL +E D L++ L++DEIHER ++ DFLL +++ LL ++++ILMSATIN
Sbjct: 333 LLRRLIE---DPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINA 389
Query: 364 ELFHTYFNRIAKIIKVPGRLYPI-QLEYHPIVELDRTKSEKLDPGPY 409
++F TYF + + +PG +P+ +L ++E R + D G Y
Sbjct: 390 DMFSTYFGN-SPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNY 435
Score = 133 (51.9 bits), Expect = 9.7e-25, Sum P(4) = 9.7e-25
Identities = 27/57 (47%), Positives = 42/57 (73%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D L++ L++DEIHER ++ DFLL +++ LL ++++ILMSATIN ++F TYF
Sbjct: 340 DPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYF 396
Score = 118 (46.6 bits), Expect = 2.1e-68, Sum P(5) = 2.1e-68
Identities = 19/59 (32%), Positives = 44/59 (74%)
Query: 20 KQKEKFSTLMK-IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
++K K + +K ++ + LP + K+E +++V + +V++++G+TGCGK+TQ+PQ++++
Sbjct: 209 QEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILE 267
Score = 105 (42.0 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
++L GA++ E +T LGR L LPVD +GKML+ G++F ++ L + AL +
Sbjct: 687 IELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAY 743
Score = 105 (42.0 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
++L GA++ E +T LGR L LPVD +GKML+ G++F ++ L + AL +
Sbjct: 687 IELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAY 743
Score = 105 (42.0 bits), Expect = 3.5e-34, Sum P(5) = 3.5e-34
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
++L GA++ E +T LGR L LPVD +GKML+ G++F ++ L + AL +
Sbjct: 687 IELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAY 743
Score = 68 (29.0 bits), Expect = 1.3e-80, Sum P(5) = 1.3e-80
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 1193 DVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
D+ ++ +L +GLYP V K F+ K+ G V +HP SV
Sbjct: 839 DMEMISAVLCAGLYPNVV-----QCKRRGKRTAFYTKELGKVDIHPGSV 882
Score = 68 (29.0 bits), Expect = 1.2e-70, Sum P(5) = 1.2e-70
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L++ L++DEIHER ++ DFLL +++ LL
Sbjct: 343 LTNVSHLLVDEIHERGMNEDFLLIILRDLL 372
Score = 59 (25.8 bits), Expect = 1.0e-69, Sum P(5) = 1.0e-69
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L++ L++DE+HER + DFLL ++
Sbjct: 340 DPNLTNVSHLLVDEIHERGMNEDFLLIIL 368
Score = 38 (18.4 bits), Expect = 1.3e-80, Sum P(5) = 1.3e-80
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1247 DVLRISEDDIVDPPPGLKLPGRNVISSKHQLL 1278
+V ++ I DP + + G+ V+S+ +LL
Sbjct: 959 EVDKLLNKKIEDPSLDITVEGKGVVSAVVELL 990
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 538 (194.4 bits), Expect = 1.9e-80, Sum P(3) = 1.9e-80
Identities = 118/340 (34%), Positives = 196/340 (57%)
Query: 417 DKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQDRV 472
D YP G VL+F+ G++EI + Q N ++ +V PLHS+LS EEQ V
Sbjct: 885 DHSYPP---GAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAV 941
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F G+ K I+STNIAETS+TID + +V+DSG++KE YD + M +L++ W+S+A+A
Sbjct: 942 FTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANA 1001
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK-- 589
QRKGRAGR GVC+ L++ ++ L++ PEI+RV ++ L L + + + R
Sbjct: 1002 LQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLD 1061
Query: 590 --FPFLEAPPAE-NIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMF 646
F L PP E ++E++ + L GA+ +E +T LG L+ LPVD+ +GK+++ G++F
Sbjct: 1062 SVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIF 1121
Query: 647 HQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDR 706
+D L++AA L+ +SPF + + + + + D L ++ AYK W +
Sbjct: 1122 RCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQAYKGWCNAAQSG 1181
Query: 707 VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
++ ++C+ + + E+ L+ QF ++L D G + D
Sbjct: 1182 FKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKD 1221
Score = 249 (92.7 bits), Expect = 1.9e-80, Sum P(3) = 1.9e-80
Identities = 58/146 (39%), Positives = 90/146 (61%)
Query: 5 LYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTG 64
+ EE K L R +FK+K + ++E + LP Q ++ I++ ++K +V++I+G TG
Sbjct: 552 MQEENKKLCR---EFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTG 608
Query: 65 CGKSTQIPQYLV----QAGF-QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQI 116
CGK+TQIPQ+++ Q G R+A CTQPRRI+ I+++ RVA E + GYQI
Sbjct: 609 CGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQI 668
Query: 117 RFEKHRREKTKIVFITEGLLLRQDSG 142
R E R T+++F T G+LLR+ G
Sbjct: 669 RLETVRSSITRLMFCTTGVLLRRLEG 694
Score = 169 (64.5 bits), Expect = 1.9e-80, Sum P(3) = 1.9e-80
Identities = 42/119 (35%), Positives = 65/119 (54%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D LS +++DE+HER DFLL V+K L+ ++K+I+MSAT+N ELF YFN
Sbjct: 695 DPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNN- 753
Query: 374 AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYP--RTERGDVLI 430
I +PGR +P++ ++ + +T+ D PY R + P T +G L+
Sbjct: 754 CPCIHIPGRTFPVE-QFFLEDAIAKTRYVIEDGSPYRRSTKLNRSSGPGGTTGKGRALV 811
Score = 163 (62.4 bits), Expect = 5.2e-40, Sum P(3) = 5.2e-40
Identities = 40/127 (31%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK----FPFLEA 863
R GVC+ L++ ++ L++ PEI+RV ++ L L + + + R F L
Sbjct: 1010 RVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIE 1069
Query: 864 PPAE-NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PP E ++E++ + L GA+ +E +T LG L+ LPVD+ +GK+++ G++F +D L
Sbjct: 1070 PPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALT 1129
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1130 IAASLAF 1136
Score = 137 (53.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D LS +++DE+HER DFLL V+K L+ ++K+I+MSAT+N ELF Y
Sbjct: 691 RLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQY 750
Query: 1175 FN 1176
FN
Sbjct: 751 FN 752
Score = 109 (43.4 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 72/311 (23%), Positives = 128/311 (41%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHH--SXXXX 1087
GA+ +E +T LG L+ LPVD+ +GK+++ G++F +D L + +L F S
Sbjct: 1087 GALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDK 1146
Query: 1088 XXXAGERLESMD-ANEVEFRLKHDPKQ-VQVAADNFLSSYDVLVLDEIHERHLHGDFLLG 1145
A E+ + AN L K A F + Y + + R L
Sbjct: 1147 REEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQE----- 1201
Query: 1146 VIKCLLHSTAEV--KIILMSATINIELFHTYFNRIAKDLL--SGSTARSHKDVT-ILKVI 1200
I CL AE+ I + + + ++ + +L +G A + D T ++ +
Sbjct: 1202 -IACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAM 1260
Query: 1201 LASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPP 1260
L + LYP V + + + +K L KG + + P + + + S+ + P
Sbjct: 1261 LCAALYPNVV---QVRSPQ-MKYKL---TSKGAMKMQPKA---EEQRFMTKSDGAVHIHP 1310
Query: 1261 PGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLV 1320
+ R+ S LVY ++TS+ F+ +C M + ++LF N + R
Sbjct: 1311 SSVNFSVRHYDSP---YLVYHEKVKTSRVFIRDC-SMVCVYPMVLFGGG-QVNVELQRGQ 1365
Query: 1321 F-----DSWIE 1326
F D WI+
Sbjct: 1366 FIISLDDGWIK 1376
Score = 97 (39.2 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
GA+ +E +T LG L+ LPVD+ +GK+++ G++F +D L + +L F
Sbjct: 1087 GALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAF 1136
Score = 97 (39.2 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
GA+ +E +T LG L+ LPVD+ +GK+++ G++F +D L + +L F
Sbjct: 1087 GALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAF 1136
Score = 65 (27.9 bits), Expect = 1.6e-69, Sum P(3) = 1.6e-69
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
LS +++DE+HER DFLL V+K L+
Sbjct: 698 LSGVTHVIVDEVHERTEESDFLLLVLKDLI 727
Score = 58 (25.5 bits), Expect = 8.5e-69, Sum P(3) = 8.5e-69
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS +I+DEVHER DFLL V+
Sbjct: 695 DPELSGVTHVIVDEVHERTEESDFLLLVL 723
Score = 42 (19.8 bits), Expect = 2.7e-46, Sum P(2) = 2.7e-46
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 380 PGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILS-IIDKKYPRTERGDVLIF--MSGIS 436
PG LYP Q P+V T E L + + + + E G+ +++ +S +
Sbjct: 379 PGSLYPFQ---PPLVAFSST-DESLSGAGRLSVTEYLFGQSLSAAEEGEPVVYTLISSLE 434
Query: 437 E 437
E
Sbjct: 435 E 435
Score = 42 (19.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 545 GVCYRLYSEEQYSLLAEYSTPEIRRVS 571
G C L EE ++L A Y R+S
Sbjct: 263 GECVALRQEEAFALTAIYGERFCERIS 289
Score = 40 (19.1 bits), Expect = 6.5e-67, Sum P(3) = 6.5e-67
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 705 IVDEVHERTEESDFLLLV 722
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 604 (217.7 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 148/435 (34%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTF 567
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A I ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 568 FDD-APIFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 616
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 617 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 676
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 677 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 736
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 797 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 856
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 857 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 911
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 912 MRRARDVREQLEGLL 926
Score = 256 (95.2 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
I+ + SLPV +++E++ + +V+II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 396 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 455
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 508
Score = 174 (66.3 bits), Expect = 1.0e-32, Sum P(4) = 1.0e-32
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 792 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 851
Query: 928 N 928
+
Sbjct: 852 S 852
Score = 126 (49.4 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD 569
Score = 85 (35.0 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIK 541
Score = 74 (31.1 bits), Expect = 3.4e-79, Sum P(4) = 3.4e-79
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLI 540
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 851 LS-VNNS 856
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 977 LN 978
L+
Sbjct: 851 LS 852
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1027 LN 1028
L+
Sbjct: 851 LS 852
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 579 RRFPVDIFYTKAPEADYLEACVVSVLQ 605
Score = 39 (18.8 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W+ LHS L L E+ V + ++C + + D + SG ++ +
Sbjct: 10 WVQDELHSVLGLSER-HVAQFLIGTAQRCASAEEFVQRLRDTDTLDL---SGPARDFALR 65
Query: 515 VTAKMSTLQEFWISK-ASAEQRKGRA 539
+ K+ ++ + K A A +R+ RA
Sbjct: 66 LWNKVP--RKAVVEKPARAAEREARA 89
Score = 37 (18.1 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEI 1007
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 606 (218.4 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 169/516 (32%), Positives = 269/516 (52%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D LSS +VLDEIHER+L D L+ VIK LLH ++ ++ + E
Sbjct: 314 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGN 373
Query: 332 ----HLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF-----NRIAK-----II 377
H+ G F V++ LL E + + F F NR K I
Sbjct: 374 CPMIHIPG-FTFPVVEYLLEDIIEKIRYVPDQKEHRSQFKRGFMQGHVNRQEKEEKEAIY 432
Query: 378 KV--PGRLYPIQLEYHP-IVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K P + ++ Y V+ L +K+D I ++I E G +L+F+
Sbjct: 433 KERWPAYIKELRTRYSASTVDVLQMMDDDKVDLN---LIAALIRYIVLEEEDGAILVFLP 489
Query: 434 GISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
G IS++ + KS ++++PLHS + Q +VF P G+RK +++TNIAET
Sbjct: 490 GWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAET 549
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
SITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 550 SITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN 609
Query: 553 EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQ 610
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S++ L +
Sbjct: 610 GLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLME 669
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF
Sbjct: 670 LSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG 729
Query: 671 RDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTK 728
++ + RKEL + D LTV+NA++ W K+ R +K +C + +
Sbjct: 730 KEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHN 789
Query: 729 LRSQFKQVLGDSGLITD-IP-GPDASLSS-RERALR 761
++ QF + L +G ++ P P A+++S E+ ++
Sbjct: 790 MKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIK 825
Score = 204 (76.9 bits), Expect = 5.2e-35, Sum P(4) = 5.2e-35
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 598 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN 657
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 658 EAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 717
Query: 927 LNF 929
L+F
Sbjct: 718 LSF 720
Score = 193 (73.0 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 180 DLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD 239
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 240 NYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGS 299
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 300 ILYCTTGIILQ 310
Score = 159 (61.0 bits), Expect = 9.0e-22, Sum P(3) = 9.0e-22
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D+ LSS +VLDEIHER+L D L+ VIK LLH +++K+ILMSAT+N E F YF
Sbjct: 314 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGN 373
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 374 CPMIHIPGFT 383
Score = 107 (42.7 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 937 RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLS 996
R+ + FLS L +D P + +V S+ H L++L+ A+D +E +T LG L+
Sbjct: 640 RLGGIAYFLSRL-MDPPSNEAVVL-SIKH------LMELS----ALDKQEELTPLGVHLA 687
Query: 997 DLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 720
Score = 107 (42.7 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 987 RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLS 1046
R+ + FLS L +D P + +V S+ H L++L+ A+D +E +T LG L+
Sbjct: 640 RLGGIAYFLSRL-MDPPSNEAVVL-SIKH------LMELS----ALDKQEELTPLGVHLA 687
Query: 1047 DLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 720
Score = 105 (42.0 bits), Expect = 8.3e-25, Sum P(4) = 8.3e-25
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 887 RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLS 946
R+ + FLS L +D P + +V S+ H L++L+ A+D +E +T LG L+
Sbjct: 640 RLGGIAYFLSRL-MDPPSNEAVVL-SIKH------LMELS----ALDKQEELTPLGVHLA 687
Query: 947 DLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 688 RLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 720
Score = 96 (38.9 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 1168 IELFHTYFNRIAKDLLSGS--TARSHKDVT---------ILKVILASGLYPQVAIGDEFN 1216
+++ H + A+ LL ++RS KD I+K ++ +GLYP+VA N
Sbjct: 784 LQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVA-KIRLN 842
Query: 1217 TSETVKEALFHCKDKGFVSLHPFSVFTSQPD 1247
+ K H K G VS+HP SV Q D
Sbjct: 843 LGKKRKMVKVHTKSDGLVSIHPKSVNVEQTD 873
Score = 83 (34.3 bits), Expect = 2.4e-80, Sum P(4) = 2.4e-80
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D+ LSS ++LDE+HER+L D L+ VI LH
Sbjct: 314 SDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLH 348
Score = 49 (22.3 bits), Expect = 9.0e-22, Sum P(3) = 9.0e-22
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ K FL+ L MP + +F T ++V
Sbjct: 488 LPGWDNISTLHDLLMSQVMFKSDK-FLIIPLHSLMPTVNQTQVFKK---TPPGVRKIVIA 543
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 544 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 581
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 603 (217.3 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 147/435 (33%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTF 567
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A + ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 568 FDD-APVFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 616
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 617 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 676
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 677 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 736
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 797 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 856
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 857 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 911
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 912 MRRARDVREQLEGLL 926
Score = 256 (95.2 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
I+ + SLPV +++E++ V +++II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 508
Score = 174 (66.3 bits), Expect = 1.0e-32, Sum P(4) = 1.0e-32
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 792 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 851
Query: 928 N 928
+
Sbjct: 852 S 852
Score = 126 (49.4 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD 569
Score = 85 (35.0 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIK 541
Score = 74 (31.1 bits), Expect = 4.4e-79, Sum P(4) = 4.4e-79
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLI 540
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 851 LS-VNNS 856
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 977 LN 978
L+
Sbjct: 851 LS 852
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1027 LN 1028
L+
Sbjct: 851 LS 852
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 579 RRFPVDIFYTKAPEADYLEACVVSVLQ 605
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 22/103 (21%), Positives = 40/103 (38%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W+ LHS L L E+ V + ++C + + D + SG ++ +
Sbjct: 10 WVQDELHSVLGLSER-HVAQFLIGTAQRCASAEEFVQRLRDTDTLDL---SGPARDFALK 65
Query: 515 VTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS 557
+ K+ + A A +R+ RA YRL + + S
Sbjct: 66 LWNKVPR-KAVAEKPARAAEREARA-LLEKNRSYRLLEDSEES 106
Score = 37 (18.1 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEI 1007
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRER 758
++K R + K K+R EE+ E ++ + K+ G S T+ P + ER
Sbjct: 118 LQKKRKKRKHLRKKRQEEEEE-EEEEEVPEKGKKTTGGSKPQTEKPESEDEWERTER 173
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 603 (217.3 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 147/435 (33%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+
Sbjct: 508 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTF 567
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A + ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 568 FDD-APVFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 616
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 617 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 676
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 677 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 736
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 737 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 796
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 797 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 856
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 857 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 911
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 912 MRRARDVREQLEGLL 926
Score = 256 (95.2 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
I+ + SLPV +++E++ V +++II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 508
Score = 174 (66.3 bits), Expect = 1.0e-32, Sum P(4) = 1.0e-32
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 791
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 792 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 851
Query: 928 N 928
+
Sbjct: 852 S 852
Score = 126 (49.4 bits), Expect = 8.3e-24, Sum P(3) = 8.3e-24
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD 569
Score = 85 (35.0 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLIK 541
Score = 74 (31.1 bits), Expect = 4.4e-79, Sum P(4) = 4.4e-79
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 515 LASYSVVMVDEAHERTLHTDILFGLI 540
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 851 LS-VNNS 856
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 977 LN 978
L+
Sbjct: 851 LS 852
Score = 68 (29.0 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 791 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 850
Query: 1027 LN 1028
L+
Sbjct: 851 LS 852
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 579 RRFPVDIFYTKAPEADYLEACVVSVLQ 605
Score = 39 (18.8 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 22/103 (21%), Positives = 40/103 (38%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W+ LHS L L E+ V + ++C + + D + SG ++ +
Sbjct: 10 WVQDELHSVLGLSER-HVAQFLIGTAQRCASAEEFVQRLRDTDTLDL---SGPARDFALK 65
Query: 515 VTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS 557
+ K+ + A A +R+ RA YRL + + S
Sbjct: 66 LWNKVPR-KAVAEKPARAAEREARA-LLEKNRSYRLLEDSEES 106
Score = 37 (18.1 bits), Expect = 3.1e-80, Sum P(4) = 3.1e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 976 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEI 1007
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 602 (217.0 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 147/435 (33%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+
Sbjct: 504 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTF 563
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A + ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 564 FDD-APVFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 612
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 613 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 672
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 673 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 732
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 733 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 792
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 793 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 852
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 853 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 907
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 908 MRRARDVREQLEGLL 922
Score = 256 (95.2 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
I+ + SLPV +++E++ + +V+II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 504
Score = 174 (66.3 bits), Expect = 9.9e-33, Sum P(4) = 9.9e-33
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 787
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 788 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 847
Query: 928 N 928
+
Sbjct: 848 S 848
Score = 125 (49.1 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFD 565
Score = 85 (35.0 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIK 537
Score = 74 (31.1 bits), Expect = 5.3e-79, Sum P(4) = 5.3e-79
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLI 536
Score = 69 (29.3 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 787 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 846
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 847 LS-VNNS 852
Score = 68 (29.0 bits), Expect = 1.5e-21, Sum P(5) = 1.5e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 787 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 846
Query: 977 LN 978
L+
Sbjct: 847 LS 848
Score = 68 (29.0 bits), Expect = 1.5e-21, Sum P(5) = 1.5e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 787 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 846
Query: 1027 LN 1028
L+
Sbjct: 847 LS 848
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/104 (22%), Positives = 43/104 (41%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W+ LHS L L E+ V + ++C + + D + SG ++ +
Sbjct: 10 WVQDELHSVLGLSER-HVAQFLIGTAQRCTSAEEFVQRLRDTDTLDL---SGPARDFALR 65
Query: 515 VTAKMSTLQEFWISK-ASAEQRKGRAGRTGPGVCYRLYSEEQYS 557
+ K+ ++ + K A A +R+ RA YRL + + S
Sbjct: 66 LWNKVP--RKAVVEKPARAAEREARA-LLEKNRSYRLLEDSEES 106
Score = 39 (18.8 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 575 RRFPVDIFYTKAPEADYLEACVVSVLQ 601
Score = 37 (18.1 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 972 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEI 1003
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 603 (217.3 bits), Expect = 4.8e-80, Sum P(4) = 4.8e-80
Identities = 147/435 (33%), Positives = 239/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+
Sbjct: 505 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTF 564
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A + ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 565 FDD-APVFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 613
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 614 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 673
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 674 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 733
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 734 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 793
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 794 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 853
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 854 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 908
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 909 MRRARDVREQLEGLL 923
Score = 254 (94.5 bits), Expect = 4.8e-80, Sum P(4) = 4.8e-80
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
++ + SLPV +++E++ + +V+II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 393 VQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 452
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 453 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 505
Score = 174 (66.3 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 729 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 788
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 789 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 848
Query: 928 N 928
+
Sbjct: 849 S 849
Score = 126 (49.4 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+
Sbjct: 512 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFD 566
Score = 85 (35.0 bits), Expect = 4.8e-80, Sum P(4) = 4.8e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 512 LASYSVVMVDEAHERTLHTDILFGLIK 538
Score = 74 (31.1 bits), Expect = 6.7e-79, Sum P(4) = 6.7e-79
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 512 LASYSVVMVDEAHERTLHTDILFGLI 537
Score = 69 (29.3 bits), Expect = 2.0e-21, Sum P(5) = 2.0e-21
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 788 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 847
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 848 LS-VNNS 853
Score = 68 (29.0 bits), Expect = 2.5e-21, Sum P(5) = 2.5e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 788 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 847
Query: 977 LN 978
L+
Sbjct: 848 LS 849
Score = 68 (29.0 bits), Expect = 2.5e-21, Sum P(5) = 2.5e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 788 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 847
Query: 1027 LN 1028
L+
Sbjct: 848 LS 849
Score = 39 (18.8 bits), Expect = 2.0e-21, Sum P(5) = 2.0e-21
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 576 RRFPVDIFYTKAPEADYLEACVVSVLQ 602
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 18/86 (20%), Positives = 38/86 (44%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W+ LHS L L E+ V + ++C + + + D + SG ++ +
Sbjct: 10 WVQDELHSVLGLSER-HVAQFLIGTAQRCASAEDFVQRLRDTDTLDL---SGPARDFALR 65
Query: 515 VTAKMSTLQEFWISK-ASAEQRKGRA 539
+ K+ ++ + K A A +R+ +A
Sbjct: 66 LWTKVP--RKAVVEKPARAAEREAQA 89
Score = 37 (18.1 bits), Expect = 4.8e-80, Sum P(4) = 4.8e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 973 PNSSLFEEQPRWLLYHELVLTTKEFMRQVLEI 1004
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 539 (194.8 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 125/369 (33%), Positives = 210/369 (56%)
Query: 410 IRILSIIDKKYP-RTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLPLHSTLSLE 467
+ +L +D+ R G VLIF+ G++ I + + + S+ + V+ LHS LS +
Sbjct: 848 LELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQ 907
Query: 468 EQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWI 527
+Q F P G+RK +++TNIAET ITI + FV+D+G+ KE Y +++MS+L E ++
Sbjct: 908 DQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFV 967
Query: 528 SKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDV 587
SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG
Sbjct: 968 SKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSP 1027
Query: 588 RKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGS 644
F L+ P + I +++ L + GA + E +T LG+ L+ LPV++ +GKML+FG+
Sbjct: 1028 EDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGA 1087
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKK 704
+F +D V +LAAV++ +SPFT R + + A+ L D LT+ NAY W ++
Sbjct: 1088 IFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQ 1147
Query: 705 DR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRH 762
+ RS+ +C+R + + ++ + +++ +G + D + + L
Sbjct: 1148 EGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPF 1207
Query: 763 GEIKLLQAI 771
EI LL+A+
Sbjct: 1208 QEIALLKAV 1216
Score = 239 (89.2 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 186 (70.5 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 41/118 (34%), Positives = 69/118 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 981 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1040
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1041 QVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Score = 163 (62.4 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTH- 745
Query: 374 AKIIKVPGRLYPIQLEYH--PIVE 395
I+++ GR YP+++ +H IVE
Sbjct: 746 CPILRISGRSYPVEV-FHLEDIVE 768
Score = 132 (51.5 bits), Expect = 4.3e-24, Sum P(3) = 4.3e-24
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1047 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1047 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1047 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Score = 70 (29.7 bits), Expect = 3.5e-70, Sum P(4) = 3.5e-70
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L++ +++DE+HER + DFLL ++K +L
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Score = 67 (28.6 bits), Expect = 7.3e-70, Sum P(4) = 7.3e-70
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L++ +I+DEVHER + DFLL ++
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIIL 715
Score = 56 (24.8 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 1192 KDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
+++ +LK +LA+GLY V I + T K A +G +HP SV
Sbjct: 1208 QEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV 1258
Score = 42 (19.8 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
R S +++++ S+L T L P ++ ++L ++ T +VF
Sbjct: 888 RRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVF 941
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 524 (189.5 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 124/369 (33%), Positives = 209/369 (56%)
Query: 410 IRILSIIDKKYP-RTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLPLHSTLSLE 467
+ +L +DK R G VLIF+ G++ I + + + S+ + ++ LHS LS +
Sbjct: 851 LELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIALHSVLSTQ 910
Query: 468 EQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWI 527
+Q F P G+RK +++TNIAET ITI + FV+D+G+ KE Y +++MS+L E ++
Sbjct: 911 DQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFV 970
Query: 528 SKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDV 587
SKASA QR+GRAGR G C+RLY+ E++ EYS PEI RV ++ L L ++ LG
Sbjct: 971 SKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSP 1030
Query: 588 RKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGS 644
F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG+
Sbjct: 1031 EDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGA 1090
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKK 704
+F ++ V +LAAV++ +SPF R + + A+ L D LT+ NAY W ++
Sbjct: 1091 IFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQ 1150
Query: 705 DR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRH 762
+ RS+ +C+R + + ++ + +++ +G + +AL
Sbjct: 1151 EGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEG---KKGPQALSF 1207
Query: 763 GEIKLLQAI 771
+I LL+A+
Sbjct: 1208 QDIALLKAV 1216
Score = 244 (91.0 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 57/162 (35%), Positives = 96/162 (59%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
+ P E+ + + + + K+ L+K R+ LPV +++ I++T+ + RVV++A
Sbjct: 538 LEPTGAEDLEPVRNLFRRLQSTPKYQRLLKERQ---QLPVFKHRASIVETLKRHRVVVVA 594
Query: 61 GDTGCGKSTQIPQYLVQ------AGFQR--IACTQPRRIACISLSKRVAYETLSQ----- 107
G+TG GKSTQ+P +L++ G ++ I CTQPRRI+ +SL+ RV E +
Sbjct: 595 GETGSGKSTQVPHFLLEDLLLNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGG 654
Query: 108 YSNLVGYQIRFEKHRREKTKIVFITEGLLLR--QDSGLITDI 147
++L GYQIR E E T++++ T G+LLR Q+ GL+ D+
Sbjct: 655 RNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADV 696
Score = 192 (72.6 bits), Expect = 8.9e-44, Sum P(4) = 8.9e-44
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+RLY+ E++ EYS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQP 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L
Sbjct: 1044 QVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAA 1103
Query: 926 ALNFGAIDSKERVTSLGR 943
+ + +T +GR
Sbjct: 1104 VMT----EKSPFITPIGR 1117
Score = 160 (61.4 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L+ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ + F TYF
Sbjct: 690 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTH- 748
Query: 374 AKIIKVPGRLYPIQLEYH--PIVE 395
I+++ GR YP+++ +H IVE
Sbjct: 749 CPILRISGRSYPVEV-FHLEDIVE 771
Score = 129 (50.5 bits), Expect = 9.3e-26, Sum P(3) = 9.3e-26
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L+ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ + F TYF
Sbjct: 690 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHC 749
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 750 PILRISG 756
Score = 96 (38.9 bits), Expect = 7.1e-34, Sum P(4) = 7.1e-34
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 981
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L +
Sbjct: 1050 MNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMT--- 1106
Query: 982 IDSKERVTSLGR 993
+ +T +GR
Sbjct: 1107 -EKSPFITPIGR 1117
Score = 96 (38.9 bits), Expect = 7.1e-34, Sum P(4) = 7.1e-34
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 1031
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L +
Sbjct: 1050 MNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMT--- 1106
Query: 1032 IDSKERVTSLGR 1043
+ +T +GR
Sbjct: 1107 -EKSPFITPIGR 1117
Score = 94 (38.1 bits), Expect = 1.1e-33, Sum P(4) = 1.1e-33
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L
Sbjct: 1050 MNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATL 1101
Score = 70 (29.7 bits), Expect = 7.0e-80, Sum P(4) = 7.0e-80
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 1185 GSTARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
G A S +D+ +LK +LA+GLY V I + T K A +G +HP SV
Sbjct: 1201 GPQALSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSV 1258
Score = 70 (29.7 bits), Expect = 1.7e-70, Sum P(4) = 1.7e-70
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L+ +++DE+HER + DFLL ++K +L
Sbjct: 690 DGLLADVSHVIVDEVHERSVQSDFLLVILKEIL 722
Score = 67 (28.6 bits), Expect = 3.5e-70, Sum P(4) = 3.5e-70
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ +I+DEVHER + DFLL ++
Sbjct: 690 DGLLADVSHVIVDEVHERSVQSDFLLVIL 718
Score = 47 (21.6 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
R S ++QL+ S+L T L P ++ ++L ++ T +VF
Sbjct: 891 RRFYSERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVF 944
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 618 (222.6 bits), Expect = 7.0e-80, Sum P(3) = 7.0e-80
Identities = 146/438 (33%), Positives = 238/438 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L SY +++DE HER L D L G+++ ++ ++K+I+ SAT++ F T+
Sbjct: 638 ESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATF 697
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F + +PGR +P+ + + + E + L + + GD+L
Sbjct: 698 FGNVPTFT-IPGRTFPVDVMF------SKNTCEDYVESAVKQALQV----HLTPNEGDML 746
Query: 430 IFMSGISEISSIVRAAQEYN---EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVS 486
IFM G +I +E + + +LP++S L + Q ++F + +GLRKC+V+
Sbjct: 747 IFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVA 806
Query: 487 TNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGV 546
TNIAETS+T+DGI +V+DSG K Y+ M LQ + IS+A+A QR GRAGRTGPG
Sbjct: 807 TNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQ 866
Query: 547 CYRLYSEEQYS--LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
YRLY++ QY LLA + PEI+R ++ + +L L +G+ D+ +F F++ PP +NI +S
Sbjct: 867 AYRLYTQRQYKDELLA-LTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNS 925
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA+D +T+LGR +++ P+D P +ML+ VL + ++LSV S
Sbjct: 926 LYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSI 985
Query: 665 FTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFY 724
F R+ + + R++ + D LT LN Y++W + S WC I +
Sbjct: 986 FYRPKGREDEADGVREKFQRPESDHLTYLNVYQQW----RQNNYSSTWCNEHFIHIKAMR 1041
Query: 725 EVTKLRSQFKQVLGDSGL 742
+V ++R Q K ++ L
Sbjct: 1042 KVREVRQQLKDIMTQQNL 1059
Score = 253 (94.1 bits), Expect = 7.0e-80, Sum P(3) = 7.0e-80
Identities = 53/121 (43%), Positives = 79/121 (65%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ 81
K FS I E + LPV +QE+++ + + V+II G+TG GK+TQ+ QYL + G+
Sbjct: 518 KSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYS 577
Query: 82 R---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
+ I CTQPRR+A +S++KRV+ E +Q VGY IRFE E+T I ++T+G+LLR
Sbjct: 578 KRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLR 637
Query: 139 Q 139
+
Sbjct: 638 E 638
Score = 198 (74.8 bits), Expect = 4.6e-34, Sum P(3) = 4.6e-34
Identities = 43/103 (41%), Positives = 68/103 (66%)
Query: 809 RTGPGVCYRLYSEEQYS--LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 866
RTGPG YRLY++ QY LLA + PEI+R ++ + +L L +G+ D+ +F F++ PP
Sbjct: 861 RTGPGQAYRLYTQRQYKDELLA-LTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQ 919
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+NI +S+ L GA+D +TTLGR +++ P+D P +ML+
Sbjct: 920 DNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLI 962
Score = 115 (45.5 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L SY +++DE HER L D L G+++ ++ ++K+I+ SAT++ F T+F +
Sbjct: 642 DPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNV 701
Query: 1179 AKDLLSGST 1187
+ G T
Sbjct: 702 PTFTIPGRT 710
Score = 70 (29.7 bits), Expect = 7.0e-80, Sum P(3) = 7.0e-80
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L SY +++DE HER L D L G+++
Sbjct: 645 LDSYSAIIMDEAHERSLSTDVLFGLLR 671
Score = 69 (29.3 bits), Expect = 8.9e-80, Sum P(3) = 8.9e-80
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L SY +I+DE HER L D L G++
Sbjct: 642 DPELDSYSAIIMDEAHERSLSTDVLFGLL 670
Score = 63 (27.2 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
GA+D +T+LGR +++ P+D P +ML+
Sbjct: 933 GALDHTGALTTLGRQMAEFPLDPPQCQMLI 962
Score = 63 (27.2 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
GA+D +T+LGR +++ P+D P +ML+
Sbjct: 933 GALDHTGALTTLGRQMAEFPLDPPQCQMLI 962
Score = 63 (27.2 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D +T+LGR +++ P+D P +ML+
Sbjct: 933 GALDHTGALTTLGRQMAEFPLDPPQCQMLI 962
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 598 (215.6 bits), Expect = 9.5e-80, Sum P(4) = 9.5e-80
Identities = 146/435 (33%), Positives = 238/435 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F +
Sbjct: 507 EFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAF 566
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A + ++PGR +P+ + Y E D ++ + +L I + P GD+L
Sbjct: 567 FDD-APVFRIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDIL 615
Query: 430 IFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI + Q+ K + +VLP+++ L + Q R+F P G RK +V
Sbjct: 616 VFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVV 675
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G
Sbjct: 676 ATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAG 735
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + +
Sbjct: 736 KCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLA 795
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV +
Sbjct: 796 LEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNS 855
Query: 665 FTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
R +D + AR GD L +LN Y +W + S +WC ++ +
Sbjct: 856 IFYRP-KDKVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRS 910
Query: 723 FYEVTKLRSQFKQVL 737
+R Q + +L
Sbjct: 911 MRRARDVREQLEGLL 925
Score = 257 (95.5 bits), Expect = 9.5e-80, Sum P(4) = 9.5e-80
Identities = 51/113 (45%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
I+ + SLPV +++E++ + +V+II G+TG GK+TQIPQYL + G+ +IACT
Sbjct: 395 IQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 454
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + N VGY IRFE E+T + ++T+G+LLR+
Sbjct: 455 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLRE 507
Score = 174 (66.3 bits), Expect = 7.9e-33, Sum P(4) = 7.9e-33
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 790
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 791 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 850
Query: 928 N 928
+
Sbjct: 851 S 851
Score = 121 (47.7 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G+IK + E+K+++ SAT++ F +F+
Sbjct: 514 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFD 568
Score = 85 (35.0 bits), Expect = 9.5e-80, Sum P(4) = 9.5e-80
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G+IK
Sbjct: 514 LASYSVVMVDEAHERTLHTDILFGLIK 540
Score = 74 (31.1 bits), Expect = 1.3e-78, Sum P(4) = 1.3e-78
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+SY ++++DE HER L+ D L G+I
Sbjct: 514 LASYSVVMVDEAHERTLHTDILFGLI 539
Score = 69 (29.3 bits), Expect = 9.7e-22, Sum P(5) = 9.7e-22
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 1018 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 790 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 849
Query: 1077 LNFVHHS 1083
L+ V++S
Sbjct: 850 LS-VNNS 855
Score = 68 (29.0 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 918 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 790 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 849
Query: 977 LN 978
L+
Sbjct: 850 LS 851
Score = 68 (29.0 bits), Expect = 1.2e-21, Sum P(5) = 1.2e-21
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 968 DTMLL-LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+T+LL L+ GA++ +T+ GR +++LPVD L KM++ + + +L +
Sbjct: 790 ETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAM 849
Query: 1027 LN 1028
L+
Sbjct: 850 LS 851
Score = 39 (18.8 bits), Expect = 9.7e-22, Sum P(5) = 9.7e-22
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 856 RKFP----FLEAPPAENIESSVRSLTQ 878
R+FP + +AP A+ +E+ V S+ Q
Sbjct: 578 RRFPVDIFYTKAPEADYLEACVVSVLQ 604
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 455 WIVLPLHSTLSLEEQ 469
W+ LHS L L E+
Sbjct: 10 WVQEELHSVLGLSER 24
Score = 37 (18.1 bits), Expect = 9.5e-80, Sum P(4) = 9.5e-80
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 975 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEI 1006
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 628 (226.1 bits), Expect = 1.1e-79, Sum P(3) = 1.1e-79
Identities = 140/429 (32%), Positives = 243/429 (56%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L Y +++DE HER L+ D L G++K ++ ++K+I+ SAT++ + F +F +
Sbjct: 767 DPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDV 826
Query: 374 AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
+ +PGR +P+ + + +T E +ILSI + GD+L+FM+
Sbjct: 827 P-VFTIPGRTFPVDVLW------SKTPCEDYVDSAVKQILSI----HVTQGVGDILVFMT 875
Query: 434 GISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNI 489
G +I + +E ++ +LP++S L + Q ++F A G RKCI++TNI
Sbjct: 876 GQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNI 935
Query: 490 AETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYR 549
AETS+T+DGI +V+D+G K Y+ M +LQ ISKA+A QR GRAGRTGPG CYR
Sbjct: 936 AETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYR 995
Query: 550 LYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
LY+E + L + + PEI+R ++ +++L+L MG+ ++ F F++ PP +NI +S+ L
Sbjct: 996 LYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQL 1055
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
GA+D + ++T LG+ +S+ P+D PL KM++ ++++ ++LS+ S F
Sbjct: 1056 WVLGALDDQGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRP 1115
Query: 669 AFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTK 728
+ + + +R++ D LT+L+ Y++W K S +WC I + +V +
Sbjct: 1116 KGAEEESDASREKFFVPESDHLTLLHVYQQW----KINNYSSQWCAEHYIHIKAMRKVRE 1171
Query: 729 LRSQFKQVL 737
+R Q ++
Sbjct: 1172 VRGQLLDIM 1180
Score = 242 (90.2 bits), Expect = 1.1e-79, Sum P(3) = 1.1e-79
Identities = 49/119 (41%), Positives = 76/119 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG---F 80
+FS I+E + LP+ + +++ + + V+II G+TG GK+TQ+ QYL + G F
Sbjct: 645 EFSKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKF 704
Query: 81 QRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+I CTQPRR+A +S++KRV+ E N VGY IRFE +T I ++T+G+LLR+
Sbjct: 705 GKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRE 763
Score = 216 (81.1 bits), Expect = 7.6e-35, Sum P(3) = 7.6e-35
Identities = 41/102 (40%), Positives = 70/102 (68%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E + L + + PEI+R ++ +++L+L MG+ ++ F F++ PP +
Sbjct: 987 RTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQD 1046
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
NI +S+ L GA+D + ++T LG+ +S+ P+D PL KM++
Sbjct: 1047 NILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
Score = 78 (32.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
GA+D + ++T LG+ +S+ P+D PL KM++
Sbjct: 1059 GALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
Score = 78 (32.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
GA+D + ++T LG+ +S+ P+D PL KM++
Sbjct: 1059 GALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
Score = 78 (32.5 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D + ++T LG+ +S+ P+D PL KM++
Sbjct: 1059 GALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
Score = 73 (30.8 bits), Expect = 1.1e-79, Sum P(3) = 1.1e-79
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G++K
Sbjct: 770 LDKYSAIIMDEAHERSLNTDVLFGILK 796
Score = 67 (28.6 bits), Expect = 4.5e-79, Sum P(3) = 4.5e-79
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y +I+DE HER L D L G++
Sbjct: 767 DPNLDKYSAIIMDEAHERSLNTDVLFGIL 795
Score = 43 (20.2 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 1248 VLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSL 1283
V + + D +DPPP N+++S +QL V +L
Sbjct: 1031 VKNLLDFDFMDPPPQ-----DNILNSMYQLWVLGAL 1061
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 537 (194.1 bits), Expect = 1.2e-79, Sum P(4) = 1.2e-79
Identities = 123/356 (34%), Positives = 204/356 (57%)
Query: 422 RTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
R G VLIF+ G++ I + + + S+ + V+ LHS LS ++Q F P G+
Sbjct: 864 RNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGV 923
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK +++TNIAET ITI + FV+D+G+ KE Y +++MS+L E ++SKASA QR+GRAG
Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 983
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 598
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 599 ENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAA 657
+ I +++ L + GA + E +T LG+ L+ LPV++ +GKML+FG++F +D V +LAA
Sbjct: 1044 QVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAA 1103
Query: 658 VLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDR-VRSK-KWCKR 715
V++ +SPFT R + + A+ L D LT+ NAY W +++ RS+ +C+R
Sbjct: 1104 VMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRR 1163
Query: 716 RGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRHGEIKLLQAI 771
+ + ++ + +++ +G + D + + L EI LL+A+
Sbjct: 1164 NFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEIALLKAV 1219
Score = 239 (89.2 bits), Expect = 1.2e-79, Sum P(4) = 1.2e-79
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 186 (70.5 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 41/118 (34%), Positives = 69/118 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1044 QVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 163 (62.4 bits), Expect = 1.2e-79, Sum P(4) = 1.2e-79
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTH- 745
Query: 374 AKIIKVPGRLYPIQLEYH--PIVE 395
I+++ GR YP+++ +H IVE
Sbjct: 746 CPILRISGRSYPVEV-FHLEDIVE 768
Score = 132 (51.5 bits), Expect = 4.4e-24, Sum P(3) = 4.4e-24
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 94 (38.1 bits), Expect = 5.3e-32, Sum P(4) = 5.3e-32
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E +T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 70 (29.7 bits), Expect = 6.0e-70, Sum P(4) = 6.0e-70
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L++ +++DE+HER + DFLL ++K +L
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Score = 67 (28.6 bits), Expect = 1.2e-69, Sum P(4) = 1.2e-69
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L++ +I+DEVHER + DFLL ++
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIIL 715
Score = 56 (24.8 bits), Expect = 1.2e-79, Sum P(4) = 1.2e-79
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 1192 KDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
+++ +LK +LA+GLY V I + T K A +G +HP SV
Sbjct: 1211 QEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV 1261
Score = 42 (19.8 bits), Expect = 7.7e-26, Sum P(3) = 7.7e-26
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
R S +++++ S+L T L P ++ ++L ++ T +VF
Sbjct: 891 RRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVF 944
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 517 (187.1 bits), Expect = 1.2e-79, Sum P(5) = 1.2e-79
Identities = 121/372 (32%), Positives = 212/372 (56%)
Query: 410 IRILSIIDK--KYPRTERGDVLIFMSGISEISSI---VRAAQEYNEKSQGWIVLPLHSTL 464
+ +L+ +D+ ++ TE G VLIF+ G++ I + + + ++ + ++ LHS L
Sbjct: 852 LELLAYLDRSPQFKNTE-GAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIA-LHSVL 909
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
S ++Q F P G+RK +++TNIAET ITI + FV+DSG+ KE Y +++MS+L+E
Sbjct: 910 STQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEE 969
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGL 584
++SKASA QR+GRAGR G C+R+Y+ +++ EYS PEI RV ++ L L ++ L
Sbjct: 970 TFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNL 1029
Query: 585 GDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLV 641
G F L+ P + I +++ L + GA E ++T LG+ L+ LPV++ +GKML+
Sbjct: 1030 GSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLI 1089
Query: 642 FGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLG 701
FG++F +D V +LAAV++ +SPFT R + + A+ + D LT+ NAY W
Sbjct: 1090 FGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKK 1149
Query: 702 VKKDRVRSKK--WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERA 759
+++ + +C+R + + ++ + +++ +G + ++
Sbjct: 1150 ARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQHRLDGNGGTQS 1209
Query: 760 LRHGEIKLLQAI 771
L EI LL+A+
Sbjct: 1210 LSLHEIALLKAV 1221
Score = 245 (91.3 bits), Expect = 1.2e-79, Sum P(5) = 1.2e-79
Identities = 55/143 (38%), Positives = 89/143 (62%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ- 77
F++ + S K + + LPV +++ I++T+ K RVV++AG+TG GKSTQ+P +L++
Sbjct: 555 FRKLQSSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLED 614
Query: 78 ----AGFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKT 126
G ++ I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T
Sbjct: 615 LLLDEGTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEAT 674
Query: 127 KIVFITEGLLLR--QDSGLITDI 147
++++ T G+LLR Q+ GL++ I
Sbjct: 675 RLLYCTTGVLLRKLQEDGLLSSI 697
Score = 186 (70.5 bits), Expect = 1.7e-43, Sum P(5) = 1.7e-43
Identities = 41/118 (34%), Positives = 69/118 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ +++ EYS PEI RV ++ L L ++ LG F L+ P
Sbjct: 986 RVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQP 1045
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1046 QVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1103
Score = 179 (68.1 bits), Expect = 1.2e-79, Sum P(5) = 1.2e-79
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D LSS +++DE+HER +H DFLL ++K +LH +++ +ILMSAT++ E F +YF
Sbjct: 691 DGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAH- 749
Query: 374 AKIIKVPGRLYPIQLEYH 391
I+++ GR YP+++ +H
Sbjct: 750 CPILRISGRSYPVEV-FH 766
Score = 150 (57.9 bits), Expect = 3.5e-26, Sum P(4) = 3.5e-26
Identities = 27/57 (47%), Positives = 42/57 (73%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
D LSS +++DE+HER +H DFLL ++K +LH +++ +ILMSAT++ E F +YF
Sbjct: 691 DGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYF 747
Score = 95 (38.5 bits), Expect = 3.1e-34, Sum P(5) = 3.1e-34
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++L GA E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1052 MNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1103
Score = 95 (38.5 bits), Expect = 3.1e-34, Sum P(5) = 3.1e-34
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++L GA E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1052 MNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1103
Score = 95 (38.5 bits), Expect = 3.1e-34, Sum P(5) = 3.1e-34
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1052 MNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1103
Score = 93 (37.8 bits), Expect = 1.0e-70, Sum P(5) = 1.0e-70
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 306
D LSS +++DE+HER +H DFLL ++K +LH
Sbjct: 691 DGLLSSISHVIVDEVHERSVHSDFLLVILKEILH 724
Score = 85 (35.0 bits), Expect = 7.1e-70, Sum P(5) = 7.1e-70
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
D LSS +I+DEVHER ++ DFLL ++ LH
Sbjct: 691 DGLLSSISHVIVDEVHERSVHSDFLLVILKEILH 724
Score = 56 (24.8 bits), Expect = 1.2e-79, Sum P(5) = 1.2e-79
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1185 GSTARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
G+ + S ++ +LK +L +GLY V I + T K A +G +HP SV
Sbjct: 1206 GTQSLSLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSV 1263
Score = 44 (20.5 bits), Expect = 1.2e-79, Sum P(5) = 1.2e-79
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 1275 HQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEA 1334
H L+Y + +K +L + +LLF I L D WI P++ A
Sbjct: 1270 HGWLLYQEKVRYAKVYLRETTLISPFP-ILLFGGDIEVQHREHLLTVDGWIHFQAPVKIA 1328
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 553 (199.7 bits), Expect = 1.6e-79, Sum P(4) = 1.6e-79
Identities = 122/342 (35%), Positives = 198/342 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G +L+F+ G++EI + Q N +S +V PLHS+LS EEQ
Sbjct: 834 IVDGKHSYPP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQ 892
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD + M +L++ ++S+A
Sbjct: 893 AVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQA 952
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ ++ L + PEI+RV ++ L L + + +
Sbjct: 953 NALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 1012
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++FGS
Sbjct: 1013 LQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGS 1072
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LGVK 703
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W L +K
Sbjct: 1073 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMK 1132
Query: 704 KDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
+ S +C++ + + E+ L+ QF ++L D G + +
Sbjct: 1133 EGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKE 1174
Score = 226 (84.6 bits), Expect = 1.6e-79, Sum P(4) = 1.6e-79
Identities = 48/131 (36%), Positives = 81/131 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ I + + SLP + ++ I+ + + +V++I+G TGCGK+TQIPQ+++
Sbjct: 521 FRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDD 580
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+++A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 581 SLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYC 640
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 641 TTGVLLRRLEG 651
Score = 169 (64.5 bits), Expect = 8.6e-38, Sum P(4) = 8.6e-38
Identities = 38/127 (29%), Positives = 68/127 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ ++ L + PEI+RV ++ L L + + + +E
Sbjct: 963 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1022
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++FGS+F +D L
Sbjct: 1023 PPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 1082
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1083 IAASLAF 1089
Score = 162 (62.1 bits), Expect = 1.6e-79, Sum P(4) = 1.6e-79
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ +++ILMSAT+N ELF YF+
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSS- 710
Query: 374 AKIIKVPGRLYPI-QLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER 425
+I +PGR +P+ Q + + R + D PY+R + + K+ + R
Sbjct: 711 CPVITIPGRTFPVDQFFLEDAIAVTRYVLQ--DGSPYMRSMKQMTKEKLKARR 761
Score = 111 (44.1 bits), Expect = 8.0e-32, Sum P(4) = 8.0e-32
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ GA+ E++T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1038 DLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1089
Score = 111 (44.1 bits), Expect = 8.0e-32, Sum P(4) = 8.0e-32
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ GA+ E++T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1038 DLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1089
Score = 111 (44.1 bits), Expect = 8.0e-32, Sum P(4) = 8.0e-32
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ GA+ E++T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 1038 DLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1089
Score = 61 (26.5 bits), Expect = 5.4e-69, Sum P(4) = 5.4e-69
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L +++DE+HER DFLL V+K
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFLLLVLK 681
Score = 58 (25.5 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFLLLVL 680
Score = 52 (23.4 bits), Expect = 1.6e-79, Sum P(4) = 1.6e-79
Identities = 36/150 (24%), Positives = 63/150 (42%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
+G A S+ ++ ++ +L + LYP V E F G V + P S
Sbjct: 1195 TGEEANSNAENPKLISAMLCAALYPNVV-------QVKSPEGKFQKTSTGAVRMQPKS-- 1245
Query: 1243 TSQPDVLR-ISEDD--IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPA 1299
D L+ ++++D + P + R+ S LVY ++TS+ F+ +C M +
Sbjct: 1246 ----DELKFVTKNDGYVHIHPSSVNYQVRHFDSP---YLVYHEKIKTSRVFIRDC-SMVS 1297
Query: 1300 LQTLLLFS----SAIHTNSDFTRLVFDSWI 1325
+ L+LF S +F + D WI
Sbjct: 1298 VYPLVLFGGGQVSVQLQRGEFVVSLDDGWI 1327
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVD 633
EA P E+ V T H +++E+V +L R L + D
Sbjct: 81 EARPKWKPEAKVPLQTLHMTSENQEKVKALLRDLQEQDAD 120
Score = 40 (19.1 bits), Expect = 8.4e-67, Sum P(4) = 8.4e-67
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 662 IVDEVHERTEESDFLLLV 679
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 631 (227.2 bits), Expect = 2.4e-79, Sum P(3) = 2.4e-79
Identities = 146/426 (34%), Positives = 240/426 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ + F +F + I
Sbjct: 644 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVP-I 702
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 703 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 752
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 753 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 811
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K ++ M LQ + IS+A+A QR GRAGRTGPG C+RLY+
Sbjct: 812 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 871
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 872 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 931
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 932 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 991
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D LT LN Y +W K+ S WC I + +V ++R+
Sbjct: 992 EEESDQIREKFAVPESDHLTYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 1047
Query: 732 QFKQVL 737
Q K ++
Sbjct: 1048 QLKDIM 1053
Score = 237 (88.5 bits), Expect = 2.4e-79, Sum P(3) = 2.4e-79
Identities = 58/147 (39%), Positives = 84/147 (57%)
Query: 4 ALYEEWKLLLRTYLDFKQ--KEK------FSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
A+ E+ K+ RT F KEK F+ I E + LP+ +QE++ +
Sbjct: 491 AMTEDGKVDYRTEQKFADHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 550
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL Q G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 551 IVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 610
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 611 GYAIRFEDCTSENTLIKYMTDGILLRE 637
Score = 194 (73.4 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 43/125 (34%), Positives = 75/125 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +
Sbjct: 860 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 919
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L
Sbjct: 920 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 979
Query: 928 NFGAI 932
+ AI
Sbjct: 980 SVPAI 984
Score = 107 (42.7 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ + F +F +
Sbjct: 644 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIF 703
Query: 1182 LLSGST 1187
+ G T
Sbjct: 704 HIPGRT 709
Score = 69 (29.3 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 932 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 984
Score = 69 (29.3 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 932 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 984
Score = 67 (28.6 bits), Expect = 2.4e-79, Sum P(3) = 2.4e-79
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 644 LDHYSAIIMDEAHERSLNTDVLFGLLR 670
Score = 67 (28.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 932 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 961
Score = 63 (27.2 bits), Expect = 6.4e-79, Sum P(3) = 6.4e-79
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 644 LDHYSAIIMDEAHERSLNTDVLFGLL 669
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+K+ S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 510 MKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 552
Score = 37 (18.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDR 706
R+E + + +++YK+W K D+
Sbjct: 62 REEKDDGEDKKKSRISSYKDWEESKDDQ 89
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 633 (227.9 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 147/426 (34%), Positives = 240/426 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F +F + I
Sbjct: 642 LDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVP-I 700
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 701 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 750
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 751 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 809
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K ++ M LQ + IS+A+A QR GRAGRTGPG C+RLY+
Sbjct: 810 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 869
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 870 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 929
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 989
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D LT LN Y +W K+ S WC I + +V ++R+
Sbjct: 990 EEESDQIREKFAVPESDHLTYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 1045
Query: 732 QFKQVL 737
Q K ++
Sbjct: 1046 QLKDIM 1051
Score = 235 (87.8 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 4 ALYEEWKLLLRT---YLDFKQKE-----KFSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
AL E+ K+ RT + D +K+ +F+ I E + LP+ +QE++ +
Sbjct: 489 ALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 548
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL + G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 549 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 608
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 609 GYAIRFEDCTSENTLIKYMTDGILLRE 635
Score = 194 (73.4 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 43/125 (34%), Positives = 75/125 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +
Sbjct: 858 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 917
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L
Sbjct: 918 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 977
Query: 928 NFGAI 932
+ AI
Sbjct: 978 SVPAI 982
Score = 109 (43.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F +F +
Sbjct: 642 LDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIF 701
Query: 1182 LLSGST 1187
+ G T
Sbjct: 702 HIPGRT 707
Score = 69 (29.3 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 982
Score = 69 (29.3 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 982
Score = 67 (28.6 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 959
Score = 66 (28.3 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 642 LDHYSAVIMDEAHERSLNTDVLFGLLR 668
Score = 62 (26.9 bits), Expect = 7.7e-79, Sum P(3) = 7.7e-79
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 642 LDHYSAVIMDEAHERSLNTDVLFGLL 667
Score = 47 (21.6 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+KK S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 508 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 550
Score = 37 (18.1 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDR 706
R+E + + +++YK+W K D+
Sbjct: 62 REEKDEGEDKKKSRISSYKDWEESKDDQ 89
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 630 (226.8 bits), Expect = 3.5e-79, Sum P(3) = 3.5e-79
Identities = 150/438 (34%), Positives = 245/438 (55%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
VIK L + E + L+SY V+++DE HER LH D L G++K + ++K+++
Sbjct: 511 VIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLIS 570
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIID 417
SATI+ E F YF+ A + VPGR YP+ + Y P E + ++ IL I
Sbjct: 571 SATIDAEKFSAYFDE-APVFYVPGRRYPVDIYYTPQPEANYIQAA------ITTILQI-- 621
Query: 418 KKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQDRVF 473
+ GD+L+F++G EI + QE ++ I+ P+++ L E Q ++F
Sbjct: 622 --HTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIF 679
Query: 474 HYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
P G RK +++TNIAETSITIDG+ FV+DSG VK+ Y+ M +L S+ASA+
Sbjct: 680 DPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASAD 739
Query: 534 QRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPF 592
QR GRAGR GPG C+RLY+ Y+ L ++PEI+R ++ +++L L +G+ ++ F F
Sbjct: 740 QRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDF 799
Query: 593 LEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTV 652
++APP E + S+ L GA++++ +T LGR +++ P D L K L+ S + ++ V
Sbjct: 800 MDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEV 859
Query: 653 LSLAAVLSVQSPFTNRAFRDP--DCETARKELESNHGDPLTVLNAYKEWLGV-------K 703
LS+ ++L S R +D + + AR GD LT+L+ + EW+ +
Sbjct: 860 LSIVSMLGEASSLFYRP-KDKIMEADKARANFTQPGGDHLTLLHIWNEWVDTDFSYNWAR 918
Query: 704 KDRVRSKKWCKRRGIEEQ 721
++ ++ K C+ R + +Q
Sbjct: 919 ENFLQYKSLCRARDVRDQ 936
Score = 251 (93.4 bits), Expect = 3.5e-79, Sum P(3) = 3.5e-79
Identities = 49/113 (43%), Positives = 78/113 (69%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIACT 86
+ ++ SLPV QYK +++ + + +V++I +TG GK+TQ+PQ+L +AG+ ++I CT
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
QPRR+A +S++ RVA E + VGY IRFE EKT I ++T+G+LLR+
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLRE 523
Score = 191 (72.3 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 38/114 (33%), Positives = 70/114 (61%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R GPG C+RLY+ Y+ L ++PEI+R ++ +++L L +G+ ++ F F++APP E
Sbjct: 747 RVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPE 806
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
+ S+ L GA++++ +T LGR +++ P D L K L+ S + ++ +L
Sbjct: 807 TLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVL 860
Score = 135 (52.6 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L+SY V+++DE HER LH D L G++K + ++K+++ SATI+ E F YF+
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFD 584
Score = 88 (36.0 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L+SY V+++DE HER LH D L G++K
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVK 556
Score = 80 (33.2 bits), Expect = 3.3e-34, Sum P(4) = 3.3e-34
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
T+ L+SY ++I+DE HER L+ D L G++
Sbjct: 526 TEPDLASYSVIIIDEAHERTLHTDILFGLV 555
Score = 75 (31.5 bits), Expect = 3.7e-23, Sum P(4) = 3.7e-23
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 920 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
M L+L GA++++ +T LGR +++ P D L K L+ S + ++ +L
Sbjct: 809 MRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVL 860
Score = 75 (31.5 bits), Expect = 3.7e-23, Sum P(4) = 3.7e-23
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 970 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
M L+L GA++++ +T LGR +++ P D L K L+ S + ++ +L
Sbjct: 809 MRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVL 860
Score = 75 (31.5 bits), Expect = 3.7e-23, Sum P(4) = 3.7e-23
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 1020 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
M L+L GA++++ +T LGR +++ P D L K L+ S + ++ +L
Sbjct: 809 MRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVL 860
Score = 45 (20.9 bits), Expect = 3.5e-79, Sum P(3) = 3.5e-79
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIH 1311
P +V K ++++Y L+ T+K + C ++ +Q L + H
Sbjct: 994 PSSSVAEKKPKVIIYFELVLTTKEY---CRQITEIQPEWLLEISPH 1036
Score = 42 (19.8 bits), Expect = 2.7e-57, Sum P(3) = 2.7e-57
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 10 KLLLRTYLDFKQK-EKFSTLMKIRETQNSL-PVAQYKQEIIDTVLKERVVIIAGD 62
+L LR D + K ++ ++ + Q L P AQ + EI+ +++ + AG+
Sbjct: 215 ELALRKLADDPESWRKLASELRKKSRQQYLKPRAQQQLEILRREIRDEEQLFAGE 269
Score = 40 (19.1 bits), Expect = 4.4e-57, Sum P(3) = 4.4e-57
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 235 SSYDILILDEVHE 247
SSYD+LI + HE
Sbjct: 95 SSYDLLIEPQSHE 107
Score = 39 (18.8 bits), Expect = 5.7e-57, Sum P(3) = 5.7e-57
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 211 DANEVEFRLKHDPKQVQVATDNFLSSY 237
+ E E RL+ K ++ AT+ F+ Y
Sbjct: 183 EREEFEERLRR--KDLEAATNEFVEDY 207
Score = 39 (18.8 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGD 62
P A Y Q I T+L+ AGD
Sbjct: 606 PEANYIQAAITTILQIHTTQPAGD 629
Score = 38 (18.4 bits), Expect = 7.2e-57, Sum P(3) = 7.2e-57
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 277 SSYDVLVLDEIHE 289
SSYD+L+ + HE
Sbjct: 95 SSYDLLIEPQSHE 107
Score = 38 (18.4 bits), Expect = 7.2e-57, Sum P(3) = 7.2e-57
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 318 SSYDVLVLDEIHE 330
SSYD+L+ + HE
Sbjct: 95 SSYDLLIEPQSHE 107
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 634 (228.2 bits), Expect = 4.7e-79, Sum P(3) = 4.7e-79
Identities = 147/426 (34%), Positives = 240/426 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F +F + I
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVP-I 701
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 702 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 751
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 752 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 810
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K ++ M LQ + IS+A+A QR GRAGRTGPG C+RLY+
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D LT LN Y +W K+ S WC I + +V ++R+
Sbjct: 991 EEESDQIREKFAVPESDHLTYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 1046
Query: 732 QFKQVL 737
Q K ++
Sbjct: 1047 QLKDIM 1052
Score = 231 (86.4 bits), Expect = 4.7e-79, Sum P(3) = 4.7e-79
Identities = 56/147 (38%), Positives = 85/147 (57%)
Query: 4 ALYEEWKLLLRTYLDF----KQKEK----FSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
A+ E+ K+ RT F K+K + F+ I E + LP+ +QE++ +
Sbjct: 490 AVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 549
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL + G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 550 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 609
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 610 GYAIRFEDCTSENTLIKYMTDGILLRE 636
Score = 194 (73.4 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 43/125 (34%), Positives = 75/125 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +
Sbjct: 859 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 918
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L
Sbjct: 919 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 978
Query: 928 NFGAI 932
+ AI
Sbjct: 979 SVPAI 983
Score = 110 (43.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F +F +
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIF 702
Query: 1182 LLSGST 1187
+ G T
Sbjct: 703 HIPGRT 708
Score = 69 (29.3 bits), Expect = 4.5e-18, Sum P(3) = 4.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 983
Score = 69 (29.3 bits), Expect = 4.5e-18, Sum P(3) = 4.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 983
Score = 67 (28.6 bits), Expect = 4.7e-79, Sum P(3) = 4.7e-79
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLR 669
Score = 67 (28.6 bits), Expect = 7.2e-18, Sum P(3) = 7.2e-18
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 960
Score = 63 (27.2 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLL 668
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+K+ S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 509 MKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 551
Score = 37 (18.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDR 706
R+E + + +++YK+W K D+
Sbjct: 62 REEKDDGEDKKKSKVSSYKDWEESKDDQ 89
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 534 (193.0 bits), Expect = 6.6e-79, Sum P(4) = 6.6e-79
Identities = 122/370 (32%), Positives = 214/370 (57%)
Query: 410 IRILSIIDK--KYPRTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLPLHSTLSL 466
+ +L+ +D+ ++ E G VLIF+ G++ I + + + S+ + V+ LHS LS
Sbjct: 848 LELLTYLDRSPQFKNVE-GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILST 906
Query: 467 EEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFW 526
++Q F P+G+RK +++TNIAET ITI + FV+D+G+ KE Y +++MS+L E +
Sbjct: 907 QDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETF 966
Query: 527 ISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGD 586
+SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG
Sbjct: 967 VSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGS 1026
Query: 587 VRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFG 643
F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG
Sbjct: 1027 PEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFG 1086
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVK 703
++F +D V +LAAV++ +SPF R + + A+ L D LT+ NAY W +
Sbjct: 1087 AIFGCLDPVATLAAVMTEKSPFITPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKAR 1146
Query: 704 KDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALR 761
++ RS+ +C++ + + ++ + +++ +G ++ + + L
Sbjct: 1147 QEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSNSFEGNRATQTLS 1206
Query: 762 HGEIKLLQAI 771
EI LL+A+
Sbjct: 1207 FQEIALLKAV 1216
Score = 237 (88.5 bits), Expect = 6.6e-79, Sum P(4) = 6.6e-79
Identities = 54/139 (38%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ +++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 191 (72.3 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 44/138 (31%), Positives = 77/138 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 981 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1040
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1041 QVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAA 1100
Query: 926 ALNFGAIDSKERVTSLGR 943
+ + +T +GR
Sbjct: 1101 VMT----EKSPFITPIGR 1114
Score = 163 (62.4 bits), Expect = 6.6e-79, Sum P(4) = 6.6e-79
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTH- 745
Query: 374 AKIIKVPGRLYPIQLEYH 391
I+++ GR YP+++ +H
Sbjct: 746 CPILRISGRSYPVEV-FH 762
Score = 133 (51.9 bits), Expect = 8.9e-24, Sum P(3) = 8.9e-24
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDCEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 99 (39.9 bits), Expect = 4.2e-32, Sum P(4) = 4.2e-32
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 981
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L +
Sbjct: 1047 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMT--- 1103
Query: 982 IDSKERVTSLGR 993
+ +T +GR
Sbjct: 1104 -EKSPFITPIGR 1114
Score = 99 (39.9 bits), Expect = 4.2e-32, Sum P(4) = 4.2e-32
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 1031
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L +
Sbjct: 1047 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMT--- 1103
Query: 1032 IDSKERVTSLGR 1043
+ +T +GR
Sbjct: 1104 -EKSPFITPIGR 1114
Score = 97 (39.2 bits), Expect = 6.8e-32, Sum P(4) = 6.8e-32
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1047 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1098
Score = 70 (29.7 bits), Expect = 3.3e-69, Sum P(4) = 3.3e-69
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L++ +++DE+HER + DFLL ++K +L
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Score = 67 (28.6 bits), Expect = 6.9e-69, Sum P(4) = 6.9e-69
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L++ +I+DEVHER + DFLL ++
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIIL 715
Score = 54 (24.1 bits), Expect = 6.6e-79, Sum P(4) = 6.6e-79
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 1190 SHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
S +++ +LK +L +GLY V I + T K A +G +HP SV
Sbjct: 1206 SFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQVHPSSV 1258
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 631 (227.2 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 146/426 (34%), Positives = 241/426 (56%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F + I
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP-I 701
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 702 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 751
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 752 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 810
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K ++ M LQ + IS+A+A QR GRAGRTGPG C+RLY+
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYT 870
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 871 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 930
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 990
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D L+ LN Y +W K+ S WC I + +V ++R+
Sbjct: 991 EEESDQIREKFAVPESDHLSYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 1046
Query: 732 QFKQVL 737
Q K ++
Sbjct: 1047 QLKDIM 1052
Score = 232 (86.7 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 55/147 (37%), Positives = 86/147 (58%)
Query: 4 ALYEEWKLLLRT---YLDFKQKE-----KFSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
+L E+ K+ RT + D +K+ +F+ I E + LP+ +QE++ +
Sbjct: 490 SLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 549
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL + G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 550 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 609
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 610 GYAIRFEDCTSESTLIKYMTDGILLRE 636
Score = 194 (73.4 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 43/125 (34%), Positives = 75/125 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +
Sbjct: 859 RTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPED 918
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
N+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L
Sbjct: 919 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 978
Query: 928 NFGAI 932
+ AI
Sbjct: 979 SVPAI 983
Score = 111 (44.1 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F +
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIF 702
Query: 1182 LLSGST 1187
+ G T
Sbjct: 703 HIPGRT 708
Score = 69 (29.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 983
Score = 69 (29.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 983
Score = 67 (28.6 bits), Expect = 8.1e-79, Sum P(3) = 8.1e-79
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLR 669
Score = 67 (28.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 931 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 960
Score = 63 (27.2 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLL 668
Score = 47 (21.6 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+KK S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 509 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 551
Score = 37 (18.1 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDR 706
R+E + + +++YK+W K D+
Sbjct: 62 REEKDDGEDKKKSRISSYKDWEESKDDQ 89
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 546 (197.3 bits), Expect = 9.8e-79, Sum P(4) = 9.8e-79
Identities = 122/342 (35%), Positives = 195/342 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G VL+F+ G++EI + Q N +S ++ PLHS+LS EEQ
Sbjct: 840 IVDGKHAYPP-GAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQ 898
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD M +L++ ++S+A
Sbjct: 899 AVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQA 958
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ Y+ L + PEI+RV ++ L L + + +
Sbjct: 959 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 1018
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS
Sbjct: 1019 LQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGS 1078
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LGVK 703
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W L K
Sbjct: 1079 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTK 1138
Query: 704 KDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
+ S +C++ + + E+ L+ QF ++L D G + +
Sbjct: 1139 ESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKE 1180
Score = 229 (85.7 bits), Expect = 9.8e-79, Sum P(4) = 9.8e-79
Identities = 50/131 (38%), Positives = 80/131 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ I + + LP + ++ I+ + K +VV+I+G TGCGK+TQIPQ+++
Sbjct: 526 FQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDN 585
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+R+A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 586 SLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 645
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 646 TTGVLLRRLEG 656
Score = 166 (63.5 bits), Expect = 1.7e-37, Sum P(4) = 1.7e-37
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ Y+ L + PEI+RV ++ L L + + + +E
Sbjct: 969 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1028
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L
Sbjct: 1029 PPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALT 1088
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1089 IAASLAF 1095
Score = 154 (59.3 bits), Expect = 9.8e-79, Sum P(4) = 9.8e-79
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ A +++ILMSAT++ LF YF+
Sbjct: 657 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFS-Y 715
Query: 374 AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKK 419
+I +PGR +P+ ++ L T+ D PY+R + I K+
Sbjct: 716 CPVITIPGRAFPVD-QFFLEDALAVTRYVLQDGSPYMRSMKQIAKE 760
Score = 107 (42.7 bits), Expect = 2.0e-31, Sum P(4) = 2.0e-31
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 917 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 975
ID++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1032 IDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1091
Query: 976 ALNF 979
+L F
Sbjct: 1092 SLAF 1095
Score = 107 (42.7 bits), Expect = 2.0e-31, Sum P(4) = 2.0e-31
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 967 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1025
ID++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1032 IDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1091
Query: 1026 ALNF 1029
+L F
Sbjct: 1092 SLAF 1095
Score = 107 (42.7 bits), Expect = 2.0e-31, Sum P(4) = 2.0e-31
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1017 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1075
ID++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1032 IDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1091
Query: 1076 ALNF 1079
+L F
Sbjct: 1092 SLAF 1095
Score = 63 (27.2 bits), Expect = 3.1e-69, Sum P(4) = 3.1e-69
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
D L +++DE+HER DFLL V+K ++ +T++V
Sbjct: 657 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQV 697
Score = 57 (25.1 bits), Expect = 9.8e-79, Sum P(4) = 9.8e-79
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
+G A ++ ++ ++ +L + LYP V + T E F G V L P S
Sbjct: 1201 TGEEANTNAENPKLISAVLCAALYPNVV---QVKTPE----GKFQKTSSGVVRLQPKSA- 1252
Query: 1243 TSQPDVLRISEDD--IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPAL 1300
++ ++++D + P + R+ S L+Y ++TS+ F+ +C M ++
Sbjct: 1253 ----ELKFVTKNDGYVHIHPSSVNYQVRHFDSP---YLLYHEKIKTSRVFIRDC-SMVSV 1304
Query: 1301 QTLLLFSSAIHTNSDFTRLVF-----DSWIEVFV 1329
L+LF N R F D WI FV
Sbjct: 1305 YPLVLFGGG-QVNVQLQRGAFVVSLDDGWIR-FV 1336
Score = 56 (24.8 bits), Expect = 1.6e-68, Sum P(4) = 1.6e-68
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 657 DATLQGVTHIIVDEVHERTEESDFLLLVL 685
Score = 40 (19.1 bits), Expect = 7.7e-67, Sum P(4) = 7.7e-67
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 667 IVDEVHERTEESDFLLLV 684
Score = 39 (18.8 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 1330 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMD 1367
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 573 (206.8 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 146/470 (31%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D LS + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS+E +S + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 215 (80.7 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 170 (64.9 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 35/93 (37%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS+E +S + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 77 (32.2 bits), Expect = 1.5e-78, Sum P(3) = 1.5e-78
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D LS + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 71 (30.1 bits), Expect = 6.4e-78, Sum P(3) = 6.4e-78
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS + ++ILDE HER L D L G++
Sbjct: 161 DPNLSKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 629 (226.5 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 148/427 (34%), Positives = 237/427 (55%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L+G++K +L ++K+I+ SAT+N E F +F +
Sbjct: 299 LDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEF 358
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
I +PGR +P+ + + RT E ++L+I + P GD+L+FM+G
Sbjct: 359 I-IPGRTFPVDVHF------SRTPCEDYVDSAVKQVLAIHVSQGP----GDILVFMTGQE 407
Query: 437 EISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I + E N+ + +LP++S + E+Q ++F A G+RK IV+TNIAET
Sbjct: 408 DIEATCELVDERLKLLNDPPK-LSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAET 466
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FVVDSG K Y+ M TLQ IS+A+A QR GRAGRTGPG YRLY+
Sbjct: 467 SLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYT 526
Query: 553 EEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
E Y T PEI+R S+ + +L L +G+ D+ F F++ PP E I +S+ L
Sbjct: 527 EVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSL 586
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTVLSLAAVLSVQSPFTNRAF 670
GA+D+ +T LGR ++ P+D PL K+++ + + + +L++ ++LSV + F
Sbjct: 587 GALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKE 646
Query: 671 RDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
R + + AR++ D LT+L+ Y +W K S WC + + + ++R
Sbjct: 647 RQEESDAAREKFFVPESDHLTLLHVYTQW----KSNGYSDHWCTKHFLHAKTLRRAKEVR 702
Query: 731 SQFKQVL 737
Q ++
Sbjct: 703 DQLNDIM 709
Score = 236 (88.1 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 53/145 (36%), Positives = 87/145 (60%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ 81
+ FS +RE + LP +++++ + +VV++ G+TG GK+TQ+ Q+L + G+
Sbjct: 172 QSSFSKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYA 231
Query: 82 R---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
+ I CTQPRR+A +S++KRV+ E +LVGY IRFE T I ++T+G+LLR
Sbjct: 232 KFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLR 291
Query: 139 QDSGLITDIPGPDASL--SSRERAL 161
+ S + TD+ + + ERAL
Sbjct: 292 E-SLVQTDLDKYSCIIMDEAHERAL 315
Score = 192 (72.6 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG YRLY+E Y T PEI+R S+ + +L L +G+ D+ F F++ PP E
Sbjct: 515 RTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQE 574
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
I +S+ L GA+D+ +T LGR ++ P+D PL K+++
Sbjct: 575 TISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLII 616
Score = 125 (49.1 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L+G++K +L ++K+I+ SAT+N E F +F +
Sbjct: 299 LDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEF 358
Query: 1182 LLSGST 1187
++ G T
Sbjct: 359 IIPGRT 364
Score = 74 (31.1 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y +++DE HER L+ D L+G++K +L
Sbjct: 299 LDKYSCIIMDEAHERALNTDVLMGLLKKIL 328
Score = 68 (29.0 bits), Expect = 9.1e-61, Sum P(2) = 9.1e-61
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
V TD L Y +I+DE HER L D L+G++
Sbjct: 295 VQTD--LDKYSCIIMDEAHERALNTDVLMGLL 324
Score = 67 (28.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+ GA+D+ +T LGR ++ P+D PL K+++
Sbjct: 585 SLGALDNLGDLTHLGRQMTPFPMDPPLAKLII 616
Score = 67 (28.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+ GA+D+ +T LGR ++ P+D PL K+++
Sbjct: 585 SLGALDNLGDLTHLGRQMTPFPMDPPLAKLII 616
Score = 67 (28.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+ GA+D+ +T LGR ++ P+D PL K+++
Sbjct: 585 SLGALDNLGDLTHLGRQMTPFPMDPPLAKLII 616
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 618 (222.6 bits), Expect = 1.8e-78, Sum P(4) = 1.8e-78
Identities = 149/450 (33%), Positives = 250/450 (55%)
Query: 316 FLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAK 375
FLS+ +V+DE+HER + D LL ++K ++ +K+ILMSAT+N + F YF A
Sbjct: 693 FLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGN-AG 751
Query: 376 IIKVPGRLYPIQ---LE-YHPIVELD--------RTKSE-KLDPGPYIRILSIIDKKYPR 422
+ + GR +PI+ +E + P + D R K E ++D R++S ID +
Sbjct: 752 HLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGS 811
Query: 423 TERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
+ G +L+F+ G+S I+ +R + ++ + VLPLH++L+ EQ R F + RK
Sbjct: 812 SS-GSILVFLPGVSNIARCIREIK--SKDGSKFEVLPLHASLNTSEQRRCFKTYTK--RK 866
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
I +TNIAETSITID + V+DSG+VK++ YDV + T +E W S+A+ +QR+GRAGR
Sbjct: 867 IICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRV 926
Query: 543 GPGVCYRLYSE--EQYSLLAEYSTPEIRRVSIDSLLLSLV-----------CMGLGDVRK 589
G+CY+LY+ E+ +L + + PE+ R ++ + L++V + G ++K
Sbjct: 927 KKGICYKLYTRGFEEKGMLGQ-TPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKK 985
Query: 590 F--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFH 647
F ++ P ++ +++ L Q GA+ E +T LG +L LP+D+ LGK+LVFGS+F
Sbjct: 986 FMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFG 1045
Query: 648 QIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRV 707
++ L++ A+LS +SPF D + R + GD L Y WL + + R
Sbjct: 1046 YLEPALTITAILSTKSPFLG----DDEAREIRSKQSQGWGDVLADARVYHNWLEILETRG 1101
Query: 708 RSK--KWCKRRGIEEQRFYEVTKLRSQFKQ 735
K +WC+ + ++ + R++ +
Sbjct: 1102 VKKTVQWCEEMHLHYTTLQQIRQNRNELSE 1131
Score = 222 (83.2 bits), Expect = 1.8e-78, Sum P(4) = 1.8e-78
Identities = 51/124 (41%), Positives = 79/124 (63%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ----AG---FQ 81
+K+RE + LP + +++I+D + +VV+I+G+TG GKSTQ+ Q+++ +G Q
Sbjct: 569 LKVREREK-LPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQ 627
Query: 82 RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR--Q 139
+ CTQPRRI+ ISL++RVA+E + VGY + EK ++T + F T GLLLR Q
Sbjct: 628 TVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQ 687
Query: 140 DSGL 143
GL
Sbjct: 688 QHGL 691
Score = 167 (63.8 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 40/135 (29%), Positives = 74/135 (54%)
Query: 809 RTGPGVCYRLYSE--EQYSLLAEYSTPEIRRVSIDSLLLSLV-----------CMGLGDV 855
R G+CY+LY+ E+ +L + + PE+ R ++ + L++V + G +
Sbjct: 925 RVKKGICYKLYTRGFEEKGMLGQ-TPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSI 983
Query: 856 RKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSM 913
+KF ++ P ++ +++ L Q GA+ E +T LG +L LP+D+ LGK+LVFGS+
Sbjct: 984 KKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSI 1043
Query: 914 FHQIDTMLLLDLALN 928
F ++ L + L+
Sbjct: 1044 FGYLEPALTITAILS 1058
Score = 134 (52.2 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 1112 KQVQVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELF 1171
+++Q FLS+ +V+DE+HER + D LL ++K ++ +K+ILMSAT+N + F
Sbjct: 684 RRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTF 743
Query: 1172 HTYFNRIAKDLLSGST 1187
YF + G T
Sbjct: 744 KYYFGNAGHLHIHGRT 759
Score = 112 (44.5 bits), Expect = 1.3e-23, Sum P(4) = 1.3e-23
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 921 LLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
L L + GA+ E +T LG +L LP+D+ LGK+LVFGS+F ++ L + L+
Sbjct: 1001 LALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILS 1058
Score = 112 (44.5 bits), Expect = 1.3e-23, Sum P(4) = 1.3e-23
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 971 LLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
L L + GA+ E +T LG +L LP+D+ LGK+LVFGS+F ++ L + L+
Sbjct: 1001 LALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILS 1058
Score = 112 (44.5 bits), Expect = 1.3e-23, Sum P(4) = 1.3e-23
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 1021 LLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
L L + GA+ E +T LG +L LP+D+ LGK+LVFGS+F ++ L + L+
Sbjct: 1001 LALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILS 1058
Score = 74 (31.1 bits), Expect = 1.8e-78, Sum P(4) = 1.8e-78
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 275 FLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
FLS+ +V+DE+HER + D LL ++K ++
Sbjct: 693 FLSTLSCVVVDEVHERSIENDILLTLLKLVI 723
Score = 66 (28.3 bits), Expect = 1.3e-77, Sum P(4) = 1.3e-77
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 224 KQVQVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+++Q FLS+ +++DEVHER + D LL ++
Sbjct: 684 RRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLL 719
Score = 62 (26.9 bits), Expect = 1.8e-78, Sum P(4) = 1.8e-78
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1272 SSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFD------SWI 1325
+S+ + Y +ET+KPFL NC + +LL ++ I + L+ D +W
Sbjct: 1222 ASRCTFVAYEQKVETTKPFLRNCTPINTYGMILLGANDILIDPLGKGLILDQAYCIKAWP 1281
Query: 1326 EVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSATHLAYSIRRLLAAD 1372
+V + L+ K D + E + + + S H IR L+A +
Sbjct: 1282 KVVILLKMLKRCLDASLHERLESSSGLNY-ESEIHQC--IRTLIAGN 1325
Score = 56 (24.8 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 1340 VNQLEHSLTRDLVQFMSS-ATHLAYSIRRLLAADLKT-----MYRRTGAESGVPGSNP 1391
V Q+++ + RDLV F + A+ A RR A +K +Y R E G+ G P
Sbjct: 892 VKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTP 949
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEF 525
+T I+ ++ + ++ ++ E Y STLQ F
Sbjct: 331 TTGISVQNLNSANLAIHYNAKRISETGYSFDLCFSTLQTF 370
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 623 (224.4 bits), Expect = 2.5e-78, Sum P(3) = 2.5e-78
Identities = 144/433 (33%), Positives = 243/433 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E ++ L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ + F ++
Sbjct: 667 ESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASF 726
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F + I +PGR +P+ + + + D ++ + I + ++ GD+L
Sbjct: 727 FGNVP-IFHIPGRTFPVDILFSKTPQEDYVEAA-VKQALQIHLSGMV---------GDIL 775
Query: 430 IFMSGISEIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
IFM G +I IV + E + VLP++S L + Q ++F AP+G+RKCIV
Sbjct: 776 IFMPGQEDIEVTSDQIVERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIV 834
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+T+DGI FVVDSG K ++ M LQ + IS+A+A QR GRAGRTGPG
Sbjct: 835 ATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPG 894
Query: 546 VCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
CYRLY++ + + + + PEI+R ++ +++L L +G+ D+ F F++ PP +N+ +S
Sbjct: 895 QCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNS 954
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA+D+ +T GR + + P+D L KML+ +L + ++LSV S
Sbjct: 955 MYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSI 1014
Query: 665 FTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFY 724
F R+ + + R++ D LT LN Y +W K+ S WC I +
Sbjct: 1015 FYRPKGREEESDQVREKFSVPESDHLTYLNVYLQW----KNNNYSSIWCNDHFIHTKAMR 1070
Query: 725 EVTKLRSQFKQVL 737
+V ++R+Q K ++
Sbjct: 1071 KVREVRAQLKDIM 1083
Score = 238 (88.8 bits), Expect = 2.5e-78, Sum P(3) = 2.5e-78
Identities = 51/125 (40%), Positives = 81/125 (64%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
DF +K+ TL++ R+ LP+ +Q++++ + +VI+ G+TG GK+TQ+ QYL +
Sbjct: 549 DFAKKK---TLLEQRQY---LPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHE 602
Query: 78 AGFQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEG 134
G+ + CTQPRR+A +S++KRV+ E S VGY IRFE EKT I ++T+G
Sbjct: 603 DGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDG 662
Query: 135 LLLRQ 139
+LLR+
Sbjct: 663 ILLRE 667
Score = 188 (71.2 bits), Expect = 6.0e-31, Sum P(3) = 6.0e-31
Identities = 39/119 (32%), Positives = 72/119 (60%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY++ + + + + PEI+R ++ +++L L +G+ D+ F F++ PP +
Sbjct: 890 RTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPED 949
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFG-SMFHQIDTMLLLDL 925
N+ +S+ L GA+D+ +T GR + + P+D L KML+ M D ++++ +
Sbjct: 950 NMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Score = 107 (42.7 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 20/66 (30%), Positives = 41/66 (62%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ + F ++F +
Sbjct: 674 LDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIF 733
Query: 1182 LLSGST 1187
+ G T
Sbjct: 734 HIPGRT 739
Score = 106 (42.4 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 2 SPALYEEWKLLLRTYLDFKQ--KEK------FSTLMKIRETQNSLPVAQYKQEIIDTVLK 53
S A+ E+ K+ R F KEK F+ + E + LP+ +Q++++ +
Sbjct: 519 SKAVGEDGKVDYRAEQKFADHMKEKSEASSDFAKKKTLLEQRQYLPIFAVRQQLLNIIRD 578
Query: 54 ERVVIIAGDTGCGKSTQIPQYLVQAGF 80
+VI+ G+TG GK+TQ+ QYL + G+
Sbjct: 579 NNIVIVVGETGSGKTTQLTQYLHEDGY 605
Score = 66 (28.3 bits), Expect = 2.5e-78, Sum P(3) = 2.5e-78
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 674 LDHYSAVIMDEAHERSLNTDVLFGLLR 700
Score = 66 (28.3 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG-SMFHQIDTMLLLDL 975
GA+D+ +T GR + + P+D L KML+ M D ++++ +
Sbjct: 962 GALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Score = 66 (28.3 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG-SMFHQIDTMLLLDL 1025
GA+D+ +T GR + + P+D L KML+ M D ++++ +
Sbjct: 962 GALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Score = 66 (28.3 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG-SMFHQIDTMLLLDL 1075
GA+D+ +T GR + + P+D L KML+ M D ++++ +
Sbjct: 962 GALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Score = 62 (26.9 bits), Expect = 6.4e-78, Sum P(3) = 6.4e-78
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 674 LDHYSAVIMDEAHERSLNTDVLFGLL 699
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 555 (200.4 bits), Expect = 3.1e-78, Sum P(3) = 3.1e-78
Identities = 142/447 (31%), Positives = 238/447 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ +D L Y VL+LDE HER L+ D +G++K +L ++++I+ SAT++ + F +
Sbjct: 150 EMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDF 209
Query: 370 FNR-----IAK----IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRI-LSIIDK 418
FN +K I+ V GR +P+ + Y + P P Y++ + + K
Sbjct: 210 FNLNESGDASKDTCGILTVEGRTFPVDIFY------------TVSPVPDYVKATVETVLK 257
Query: 419 KYPRTERGDVLIFMSGISEISSIVRAAQE-------YNEKSQGWIVLPLHSTLSLEEQDR 471
+ + GDVL F++G E+ +V QE Y K VLP+++ L EQ R
Sbjct: 258 IHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKH-LCVLPMYAGLPYNEQMR 316
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK +V+TNIAETSITI+G+ FV+D VK +Y+ + +L ISKAS
Sbjct: 317 VFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKAS 376
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GRAGR G C+RLY+EE + L E + PE++R ++ ++L L +G+ +V +F
Sbjct: 377 ACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFS 436
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
FL PPA+++ ++ L G +D R+T +G +++ P+ KML+ F
Sbjct: 437 FLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSK 496
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
++++AA++ +Q+ F + ++ GD LT+LN Y+ ++ +K S
Sbjct: 497 EIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQK----SS 552
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + T +R Q + +L
Sbjct: 553 QWCQDHFLNYKGLLRATAVREQLRHLL 579
Score = 214 (80.4 bits), Expect = 3.1e-78, Sum P(3) = 3.1e-78
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---- 82
T + I + + LPV +++ I+ V + V+I G+TG GKSTQIPQYL++AG+
Sbjct: 33 TALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKV 92
Query: 83 IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK-HRREKTKIVFITEGLLLRQ 139
I TQPRR+A S++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 93 IGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVRE 150
Score = 162 (62.1 bits), Expect = 8.8e-29, Sum P(3) = 8.8e-29
Identities = 34/107 (31%), Positives = 61/107 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G C+RLY+EE + L E + PE++R ++ ++L L +G+ +V +F FL PPA++
Sbjct: 386 RNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQS 445
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T +G +++ P+ KML+ F
Sbjct: 446 MVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNF 492
Score = 129 (50.5 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ +D L Y VL+LDE HER L+ D +G++K +L ++++I+ SAT++ + F +
Sbjct: 150 EMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDF 209
Query: 1175 FN 1176
FN
Sbjct: 210 FN 211
Score = 85 (35.0 bits), Expect = 3.1e-78, Sum P(3) = 3.1e-78
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ +D L Y +LILDE HER LY D +G++
Sbjct: 150 EMMSDPLLKKYSVLILDEAHERTLYTDIAIGLL 182
Score = 84 (34.6 bits), Expect = 4.0e-78, Sum P(3) = 4.0e-78
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D L Y VL+LDE HER L+ D +G++K +L
Sbjct: 153 SDPLLKKYSVLILDEAHERTLYTDIAIGLLKKIL 186
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + ++TVLK GD + Q V + Q Q R ++ + K
Sbjct: 243 PVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQE----QARTLSRYGMKK 298
Query: 99 RVAYETLSQYSNL-VGYQIR-FEKHRREKTKIVFIT 132
+ L Y+ L Q+R FE+ K+V T
Sbjct: 299 HLC--VLPMYAGLPYNEQMRVFERMAPTVRKVVVAT 332
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 545 (196.9 bits), Expect = 3.1e-78, Sum P(4) = 3.1e-78
Identities = 121/342 (35%), Positives = 195/342 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G +L+F+ G++EI + Q N +S ++ PLHS+LS EEQ
Sbjct: 790 IVDGKHSYPP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQ 848
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD M +L++ ++S+A
Sbjct: 849 AVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQA 908
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ Y+ L + PEI+RV ++ L L + + +
Sbjct: 909 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 968
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS
Sbjct: 969 LQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGS 1028
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LGVK 703
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W L K
Sbjct: 1029 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTK 1088
Query: 704 KDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
+ S +C++ + + E+ L+ QF ++L D G + +
Sbjct: 1089 ESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKE 1130
Score = 229 (85.7 bits), Expect = 3.1e-78, Sum P(4) = 3.1e-78
Identities = 50/131 (38%), Positives = 80/131 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ I + + LP + ++ I+ + K +VV+I+G TGCGK+TQIPQ+++
Sbjct: 476 FQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDN 535
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+R+A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 536 SLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 595
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 596 TTGVLLRRLEG 606
Score = 167 (63.8 bits), Expect = 3.8e-37, Sum P(4) = 3.8e-37
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ Y+ L + PEI+RV ++ L L + + + +E
Sbjct: 919 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 978
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L
Sbjct: 979 PPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALT 1038
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1039 IAASLAF 1045
Score = 154 (59.3 bits), Expect = 3.1e-78, Sum P(4) = 3.1e-78
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ A +++ILMSAT++ LF YF+
Sbjct: 607 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFS-Y 665
Query: 374 AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKK 419
+I +PGR +P+ ++ L T+ D PY+R + I K+
Sbjct: 666 CPVITIPGRAFPVD-QFFLEDALAVTRYVLQDGSPYMRSMKQIAKE 710
Score = 106 (42.4 bits), Expect = 7.0e-31, Sum P(4) = 7.0e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 917 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 975
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 982 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1041
Query: 976 ALNF 979
+L F
Sbjct: 1042 SLAF 1045
Score = 106 (42.4 bits), Expect = 7.0e-31, Sum P(4) = 7.0e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 967 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1025
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 982 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1041
Query: 1026 ALNF 1029
+L F
Sbjct: 1042 SLAF 1045
Score = 106 (42.4 bits), Expect = 7.0e-31, Sum P(4) = 7.0e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 1017 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1075
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 982 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1041
Query: 1076 ALNF 1079
+L F
Sbjct: 1042 SLAF 1045
Score = 63 (27.2 bits), Expect = 9.7e-69, Sum P(4) = 9.7e-69
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
D L +++DE+HER DFLL V+K ++ +T++V
Sbjct: 607 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQV 647
Score = 56 (24.8 bits), Expect = 5.2e-68, Sum P(4) = 5.2e-68
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 607 DATLQGVTHIIVDEVHERTEESDFLLLVL 635
Score = 52 (23.4 bits), Expect = 3.1e-78, Sum P(4) = 3.1e-78
Identities = 36/154 (23%), Positives = 65/154 (42%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
+G A ++ ++ ++ +L + LYP V + T E F G V L P S
Sbjct: 1151 TGEEANTNAENPKLISAVLCAALYPNVV---QVKTPE----GKFQKTSSGVVRLQPKSA- 1202
Query: 1243 TSQPDVLRISEDD--IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPAL 1300
++ ++++D + P + R+ S L+Y ++TS+ F+ +C M ++
Sbjct: 1203 ----ELKFVTKNDGYVHIHPSSVNYQVRHFDSP---YLLYHEKIKTSRVFIRDC-SMVSV 1254
Query: 1301 QTLLLFSSAIHTNSDFTRLVF-----DSWIEVFV 1329
L+LF + R F D WI FV
Sbjct: 1255 YPLVLFGGG-QVSVQLQRGAFVVSLDDGWIR-FV 1286
Score = 40 (19.1 bits), Expect = 2.4e-66, Sum P(4) = 2.4e-66
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 617 IVDEVHERTEESDFLLLV 634
Score = 39 (18.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 1280 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMD 1317
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 545 (196.9 bits), Expect = 4.3e-78, Sum P(4) = 4.3e-78
Identities = 121/342 (35%), Positives = 195/342 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G +L+F+ G++EI + Q N +S ++ PLHS+LS EEQ
Sbjct: 843 IVDGKHSYPP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQ 901
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD M +L++ ++S+A
Sbjct: 902 AVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQA 961
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ Y+ L + PEI+RV ++ L L + + +
Sbjct: 962 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHN 1021
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS
Sbjct: 1022 LQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGS 1081
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LGVK 703
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W L K
Sbjct: 1082 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTK 1141
Query: 704 KDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
+ S +C++ + + E+ L+ QF ++L D G + +
Sbjct: 1142 ESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKE 1183
Score = 229 (85.7 bits), Expect = 4.3e-78, Sum P(4) = 4.3e-78
Identities = 50/131 (38%), Positives = 80/131 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
F+ K+ I + + LP + ++ I+ + K +VV+I+G TGCGK+TQIPQ+++
Sbjct: 529 FQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDN 588
Query: 79 GF----QRIA---CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFI 131
+R+A CTQPRRI+ IS+++RVA E + VGYQIR E + T++++
Sbjct: 589 SLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYC 648
Query: 132 TEGLLLRQDSG 142
T G+LLR+ G
Sbjct: 649 TTGVLLRRLEG 659
Score = 167 (63.8 bits), Expect = 4.6e-37, Sum P(4) = 4.6e-37
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ Y+ L + PEI+RV ++ L L + + + +E
Sbjct: 972 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1031
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L
Sbjct: 1032 PPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALT 1091
Query: 923 LDLALNF 929
+ +L F
Sbjct: 1092 IAASLAF 1098
Score = 154 (59.3 bits), Expect = 4.3e-78, Sum P(4) = 4.3e-78
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
D L +++DE+HER DFLL V+K ++ A +++ILMSAT++ LF YF+
Sbjct: 660 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFS-Y 718
Query: 374 AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKK 419
+I +PGR +P+ ++ L T+ D PY+R + I K+
Sbjct: 719 CPVITIPGRAFPVD-QFFLEDALAVTRYVLQDGSPYMRSMKQIAKE 763
Score = 106 (42.4 bits), Expect = 8.5e-31, Sum P(4) = 8.5e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 917 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 975
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1035 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1094
Query: 976 ALNF 979
+L F
Sbjct: 1095 SLAF 1098
Score = 106 (42.4 bits), Expect = 8.5e-31, Sum P(4) = 8.5e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 967 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1025
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1035 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1094
Query: 1026 ALNF 1029
+L F
Sbjct: 1095 SLAF 1098
Score = 106 (42.4 bits), Expect = 8.5e-31, Sum P(4) = 8.5e-31
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 1017 IDTMLLLDLAL-NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1075
+D++ + L + GA+ E++T LG L+ LPVD+ +GK+++ GS+F +D L +
Sbjct: 1035 VDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAA 1094
Query: 1076 ALNF 1079
+L F
Sbjct: 1095 SLAF 1098
Score = 63 (27.2 bits), Expect = 1.4e-68, Sum P(4) = 1.4e-68
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
D L +++DE+HER DFLL V+K ++ +T++V
Sbjct: 660 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQV 700
Score = 56 (24.8 bits), Expect = 7.3e-68, Sum P(4) = 7.3e-68
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER DFLL V+
Sbjct: 660 DATLQGVTHIIVDEVHERTEESDFLLLVL 688
Score = 52 (23.4 bits), Expect = 4.3e-78, Sum P(4) = 4.3e-78
Identities = 36/154 (23%), Positives = 65/154 (42%)
Query: 1184 SGSTARSH-KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
+G A ++ ++ ++ +L + LYP V + T E F G V L P S
Sbjct: 1204 TGEEANTNAENPKLISAVLCAALYPNVV---QVKTPE----GKFQKTSSGVVRLQPKSA- 1255
Query: 1243 TSQPDVLRISEDD--IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPAL 1300
++ ++++D + P + R+ S L+Y ++TS+ F+ +C M ++
Sbjct: 1256 ----ELKFVTKNDGYVHIHPSSVNYQVRHFDSP---YLLYHEKIKTSRVFIRDC-SMVSV 1307
Query: 1301 QTLLLFSSAIHTNSDFTRLVF-----DSWIEVFV 1329
L+LF + R F D WI FV
Sbjct: 1308 YPLVLFGGG-QVSVQLQRGAFVVSLDDGWIR-FV 1339
Score = 40 (19.1 bits), Expect = 3.4e-66, Sum P(4) = 3.4e-66
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
I+D+ + RTE D L+ +
Sbjct: 670 IVDEVHERTEESDFLLLV 687
Score = 39 (18.8 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 1333 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSMD 1370
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 605 (218.0 bits), Expect = 4.5e-78, Sum P(4) = 4.5e-78
Identities = 162/516 (31%), Positives = 275/516 (53%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D +LSS +VLDEIHER+L D L+ V+K LL+ ++ ++ + E
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 380
Query: 332 ----HLHGDFLLGVIKCLLHSTAE-VKIILMSATINIEL----FHTYFNRIAK-----II 377
H+ G F V++ LL E ++ + + + NR K I
Sbjct: 381 CPMIHIPG-FTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIY 439
Query: 378 KV--PGRLYPIQLEYHP-IVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K P + ++ Y V+ ++ + +K+D + ++ I + E G +L+F+
Sbjct: 440 KERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLE---EEDGAILVFLP 496
Query: 434 GISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
G IS++ + KS ++++PLHS + Q +VF P G+RK +++TNIAET
Sbjct: 497 GWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAET 556
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
SITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 557 SITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN 616
Query: 553 EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQ 610
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S+R L +
Sbjct: 617 GLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLME 676
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF
Sbjct: 677 LNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG 736
Query: 671 RDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTK 728
++ + RKEL + D LTV+NA++ W ++ R +K +C + +
Sbjct: 737 KEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHN 796
Query: 729 LRSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
++ QF + L +G ++ P P+++++S E+ ++
Sbjct: 797 MKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIK 832
Score = 206 (77.6 bits), Expect = 3.7e-33, Sum P(4) = 3.7e-33
Identities = 45/123 (36%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 605 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN 664
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S+R L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 665 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 724
Query: 927 LNF 929
L+F
Sbjct: 725 LSF 727
Score = 192 (72.6 bits), Expect = 4.5e-78, Sum P(4) = 4.5e-78
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 187 DLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD 246
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYS--NLVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 247 NYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGS 306
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 307 ILYCTTGIILQ 317
Score = 154 (59.3 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D +LSS +VLDEIHER+L D L+ V+K LL+ +++K+ILMSAT+N E F YF
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 380
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 381 CPMIHIPGFT 390
Score = 104 (41.7 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 727
Score = 104 (41.7 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 727
Score = 104 (41.7 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 675 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 727
Score = 82 (33.9 bits), Expect = 4.5e-78, Sum P(4) = 4.5e-78
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
+R KD S + + K I+K ++ +GLYP+VA N + K + K G V+
Sbjct: 813 SRNPKDPESNINSDNEK---IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGLVA 868
Query: 1236 LHPFSVFTSQPD 1247
+HP SV Q D
Sbjct: 869 VHPKSVNVEQTD 880
Score = 78 (32.5 bits), Expect = 4.5e-78, Sum P(4) = 4.5e-78
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D +LSS ++LDE+HER+L D L+ V+ L+
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Score = 49 (22.3 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ K FL+ L MP + +F T ++V
Sbjct: 495 LPGWDNISTLHDLLMSQVMFKSDK-FLIIPLHSLMPTVNQTQVFK---RTPPGVRKIVIA 550
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 551 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 588
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 552 (199.4 bits), Expect = 5.1e-78, Sum P(3) = 5.1e-78
Identities = 142/448 (31%), Positives = 241/448 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ AD L+ Y VL+LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ + I+ V GR +P+ + Y ++ P P YI+ K
Sbjct: 220 FNQNDTGDPSKDTSVILTVEGRTFPVDIFY---IQ---------SPVPDYIKSTVETAMK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIVRAA-QEYNEKSQGWI-----VLPLHSTLSLEEQDRV 472
+ E GD+L F++G E+ ++V ++ S+ + VLP+++ L +Q +V
Sbjct: 268 IHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKV 327
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +SKASA
Sbjct: 328 FERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASA 387
Query: 533 EQRKGRAGRTGPGVCYRLYS--EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF 590
QR GRAGR G CYRLY+ EE + L + + PE++R ++ ++L L +G+ +V +F
Sbjct: 388 NQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRF 447
Query: 591 PFLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQI 649
PFL PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 448 PFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 507
Query: 650 DTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS 709
+L++AA++ +Q+ F + ++ GD LT+LN Y+ + VK + S
Sbjct: 508 QEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVYEAF--VKHSK--S 563
Query: 710 KKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + + +R Q K++L
Sbjct: 564 SQWCQEHFLNYKGLVRASVVREQLKKLL 591
Score = 218 (81.8 bits), Expect = 5.1e-78, Sum P(3) = 5.1e-78
Identities = 47/116 (40%), Positives = 74/116 (63%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ V + ++I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRR-EKTKIVFITEGLLLRQ 139
TQPRR+A +S++ RVA E + + VGY IRF+ + T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVRE 160
Score = 163 (62.4 bits), Expect = 5.8e-29, Sum P(3) = 5.8e-29
Identities = 36/109 (33%), Positives = 63/109 (57%)
Query: 809 RTGPGVCYRLYS--EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 866
R G CYRLY+ EE + L + + PE++R ++ ++L L +G+ +V +FPFL PPA
Sbjct: 396 RNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPA 455
Query: 867 ENIESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 QSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 504
Score = 130 (50.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ AD L+ Y VL+LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 82 (33.9 bits), Expect = 5.1e-78, Sum P(3) = 5.1e-78
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
AD L+ Y VL+LDE HER L+ D +G++K
Sbjct: 163 ADPLLTRYSVLMLDEAHERTLYTDIAIGLLK 193
Score = 81 (33.6 bits), Expect = 6.5e-78, Sum P(3) = 6.5e-78
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +L+LDE HER LY D +G++
Sbjct: 160 EMMADPLLTRYSVLMLDEAHERTLYTDIAIGLL 192
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 615 (221.5 bits), Expect = 5.5e-78, Sum P(3) = 5.5e-78
Identities = 141/452 (31%), Positives = 249/452 (55%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
VIK + + E+ AD L++Y +++DE HER L+ D LLG+ K LL ++K+I+
Sbjct: 458 VIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVT 517
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRI-LSII 416
SAT+N F +F +A +PGR +P+++ ++ V +D + + + I L
Sbjct: 518 SATMNANRFTKFFG-VAPQFHIPGRTFPVEVFFNRDVNMDYVE---MAVKQVLTIHLGRW 573
Query: 417 DKKYPRTERGDVLIFMSGISEIS---SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVF 473
+ GD+L+FM+G +I +++ E + P++ST+ + Q ++F
Sbjct: 574 NADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMPQDLQKKIF 633
Query: 474 HYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
+ RK +V+TNIAETS+T+DGI++V+D G VK Y+ M TLQ IS A+A+
Sbjct: 634 NKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANAD 693
Query: 534 QRKGRAGRTGPGVCYRLYSEEQYSLLAEY--STPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
QR GRAGRTG G+ YRLY+E+ + Y PEI+R ++ +++L L + + D+ FP
Sbjct: 694 QRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFP 753
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSM--FHQI 649
FL+ PP + + S+ L GA+D+ +T LG ++ P++ L K+++ + FH
Sbjct: 754 FLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCS 813
Query: 650 DTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW-LGVKKDR-- 706
+ V+++ A+LSV + F R + + AR++ + D LT+LN + +W + + K +
Sbjct: 814 EEVVTIVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGN 873
Query: 707 -VRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+ WC + ++ + Y ++ Q ++
Sbjct: 874 YTKINNWCNKNFLQLKSLYRAKDIKHQLMLIM 905
Score = 225 (84.3 bits), Expect = 5.5e-78, Sum P(3) = 5.5e-78
Identities = 54/138 (39%), Positives = 86/138 (62%)
Query: 18 DFKQKEKFSTLMK-----IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIP 72
+ KQ+EK + + + I++ + SLP + +++ T+ +V I+ G+TG GK+TQ+
Sbjct: 333 EIKQEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLT 392
Query: 73 QYLVQAGF---------QRI-ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE-KH 121
Q+L + GF +RI ACTQPRR+A +S++KRV+ E + VGY IRFE K
Sbjct: 393 QFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKT 452
Query: 122 RREKTKIVFITEGLLLRQ 139
+KT I ++TEG+LLR+
Sbjct: 453 DNKKTVIKYMTEGILLRE 470
Score = 173 (66.0 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEY--STPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 866
RTG G+ YRLY+E+ + Y PEI+R ++ +++L L + + D+ FPFL+ PP
Sbjct: 701 RTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPK 760
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSM--FH 915
+ + S+ L GA+D+ +T LG ++ P++ L K+++ + FH
Sbjct: 761 DLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFH 811
Score = 132 (51.5 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ AD L++Y +++DE HER L+ D LLG+ K LL ++K+I+ SAT+N F +
Sbjct: 470 EILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKF 529
Query: 1175 FNRIAKDLLSGST 1187
F + + G T
Sbjct: 530 FGVAPQFHIPGRT 542
Score = 89 (36.4 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ AD L++Y +++DE HER L+ D LLG+ K LL
Sbjct: 471 ILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLL 506
Score = 77 (32.2 bits), Expect = 5.5e-78, Sum P(3) = 5.5e-78
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGV 258
++ D L++Y +I+DE HER L D LLG+
Sbjct: 470 EILADPMLANYSCIIMDEAHERSLNTDILLGL 501
Score = 58 (25.5 bits), Expect = 8.4e-19, Sum P(3) = 8.4e-19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSM--FH 965
GA+D+ +T LG ++ P++ L K+++ + FH
Sbjct: 774 GALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFH 811
Score = 58 (25.5 bits), Expect = 8.4e-19, Sum P(3) = 8.4e-19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSM--FH 1015
GA+D+ +T LG ++ P++ L K+++ + FH
Sbjct: 774 GALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFH 811
Score = 58 (25.5 bits), Expect = 8.4e-19, Sum P(3) = 8.4e-19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSM--FH 1065
GA+D+ +T LG ++ P++ L K+++ + FH
Sbjct: 774 GALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFH 811
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 564 (203.6 bits), Expect = 7.5e-78, Sum P(4) = 7.5e-78
Identities = 140/442 (31%), Positives = 225/442 (50%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ LS Y +++DE HER L D L+G++K +L +K+++ SAT+N + F +
Sbjct: 330 EFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEF 389
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDP-GPYIR--ILSIIDKKYPRTERG 426
F+ I VPGR YP+ + Y L P YI I +I ++ G
Sbjct: 390 FDN-CPIFNVPGRRYPVDIHY------------TLQPEANYIHAAITTIFQIHTTQSLPG 436
Query: 427 DVLIFMSGISEISSIVRAAQEYNEK----SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
D+L+F++G EI +E K ++ I+ P+++ L E+Q ++F PE RK
Sbjct: 437 DILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRK 496
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
+++TNIAETS+TIDGIR+V+D G VKE SY + M+ L S+AS +QR GRAGR
Sbjct: 497 VVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRV 556
Query: 543 GPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENI 601
GPG C+R++++ Y E PEI R ++ + +L L+ +G+ D+ KFP ++ P +
Sbjct: 557 GPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTL 616
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
S+ +L GA++SK +T LG+ + + P + K+L + Q VL +
Sbjct: 617 RKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVS 676
Query: 662 QSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQ 721
T F + A L D + L + +W K S+ WC+ I+ +
Sbjct: 677 MLHETPSLFIGQKRDAAASVLSEVESDHILYLEIFNQWRNSKF----SRSWCQDHKIQFK 732
Query: 722 RFYEVTKLRSQFKQVLGDSGLI 743
V +R+Q + GL+
Sbjct: 733 TMLRVRNIRNQLFRCSEKVGLV 754
Score = 257 (95.5 bits), Expect = 7.5e-78, Sum P(4) = 7.5e-78
Identities = 61/141 (43%), Positives = 86/141 (60%)
Query: 5 LYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTG 64
L E KL L + + ++ I+E + LPV QYK E++ + K +V+II G+TG
Sbjct: 190 LLPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETG 249
Query: 65 CGKSTQIPQYLVQAGFQ-----RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
GK+TQ+PQYLV+ GF +IA TQPRR+A S++ RVA E VGYQIRFE
Sbjct: 250 SGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFE 309
Query: 120 -KHRREKTKIVFITEGLLLRQ 139
K KT + ++T+G+LLR+
Sbjct: 310 DKTTPNKTVLKYMTDGMLLRE 330
Score = 162 (62.1 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 34/114 (29%), Positives = 62/114 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R GPG C+R++++ Y E PEI R ++ + +L L+ +G+ D+ KFP ++ P
Sbjct: 555 RVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIP 614
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
+ S+ +L GA++SK +T LG+ + + P + K+L + Q +L
Sbjct: 615 TLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Score = 116 (45.9 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
D+ LS Y +++DE HER L D L+G++K +L +K+++ SAT+N + F +F+
Sbjct: 334 DSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFD 391
Score = 76 (31.8 bits), Expect = 7.5e-78, Sum P(4) = 7.5e-78
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
TD+ LS Y +++DE HER L D L+G++
Sbjct: 333 TDSKLSKYSCIMIDEAHERTLATDILIGLL 362
Score = 75 (31.5 bits), Expect = 9.5e-78, Sum P(4) = 9.5e-78
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D LS Y +++DE HER L D L+G++K +L
Sbjct: 334 DSKLSKYSCIMIDEAHERTLATDILIGLLKDIL 366
Score = 58 (25.5 bits), Expect = 6.0e-22, Sum P(4) = 6.0e-22
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
GA++SK +T LG+ + + P + K+L + Q +L
Sbjct: 627 GALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Score = 58 (25.5 bits), Expect = 6.0e-22, Sum P(4) = 6.0e-22
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
GA++SK +T LG+ + + P + K+L + Q +L
Sbjct: 627 GALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Score = 58 (25.5 bits), Expect = 6.0e-22, Sum P(4) = 6.0e-22
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1071
GA++SK +T LG+ + + P + K+L + Q +L
Sbjct: 627 GALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVL 668
Score = 51 (23.0 bits), Expect = 7.5e-78, Sum P(4) = 7.5e-78
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLL 1304
++Y L+ TSK F+ +CL +P + L+
Sbjct: 830 VLYQQLMLTSKEFIRDCLVIPKEEWLI 856
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 637 (229.3 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 156/461 (33%), Positives = 256/461 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ +D +L YD +++DE HER L+ DF+LG +K +L ++KII+ SATI++E F +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKH 239
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
FN A II+V GR YP++ Y P+V+ ++++ G I + +D+ GD+L
Sbjct: 240 FNN-APIIEVSGRTYPVETRYRPLVQDTEADLDQIE-G----IFAAVDELVAEG-LGDIL 292
Query: 430 IFMSGISEISSIVRAAQEYNEKS-QGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
IFM+G EI A++ N ++ + +LPL++ LS EQ +VF + G R+ +++TN
Sbjct: 293 IFMNGEREIRD---TAEQLNRRNYRDTEILPLYARLSYGEQSKVFS-SHTG-RRIVLATN 347
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
+AETS+T+ GIR+V+D G + Y K+ L IS+ASA QR+GR GR GPG+C
Sbjct: 348 VAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICI 407
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLY E ++ ++ PEI R ++ S++L ++ +GLGD+ FPF+E P +I L
Sbjct: 408 RLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLL 467
Query: 609 TQHGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+ A+ ++ +T LGR LS +PVD L +M++ ++ VL +A+ LS+Q P
Sbjct: 468 EELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR 527
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS--KKWCKRRGIEEQRF 723
+ + A + D ++ +N ++ +K+ S +K C+ + R
Sbjct: 528 ERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRV 587
Query: 724 YEVTKLRSQFKQVLGD-SGLITDIPGPDASLSSRERALRHG 763
E L +Q KQ + D + D P A+ + RAL G
Sbjct: 588 REWQDLYTQLKQAVHDLKWRLNDTP---ANYDALHRALLSG 625
Score = 196 (74.1 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 43/132 (32%), Positives = 74/132 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R GPG+C RLY E ++ ++ PEI R ++ S++L ++ +GLGD+ FPF+E P +
Sbjct: 400 RVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRH 459
Query: 869 IESSVRSLTQHGAIDSKER---VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
I L + A+ ++ +T LGR LS +PVD L +M++ ++ +L++
Sbjct: 460 IRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIAS 519
Query: 926 ALNFGAIDSKER 937
L+ D +ER
Sbjct: 520 GLSIQ--DPRER 529
Score = 193 (73.0 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 46/123 (37%), Positives = 74/123 (60%)
Query: 23 EKFSTLMKIRETQN---SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
EK +K R N +LPV+ +++I + +VVIIAG+TG GK+TQ+P+ ++ G
Sbjct: 58 EKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELG 117
Query: 80 F-QR--IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
R I TQPRR+A S++ RVA E S +VG+++RF + ++ I +T+G+L
Sbjct: 118 LGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGIL 177
Query: 137 LRQ 139
L +
Sbjct: 178 LAE 180
Score = 158 (60.7 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ +D +L YD +++DE HER L+ DF+LG +K +L ++KII+ SATI++E F +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKH 239
Query: 1175 FNRIAKDLLSGST 1187
FN +SG T
Sbjct: 240 FNNAPIIEVSGRT 252
Score = 94 (38.1 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ +D +L YD +++DE HER L+ DF+LG +K +L
Sbjct: 181 LTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQIL 216
Score = 88 (36.0 bits), Expect = 3.3e-77, Sum P(4) = 3.3e-77
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ +D +L YD +I+DE HER L DF+LG +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYL 212
Score = 60 (26.2 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
+T LGR LS +PVD L +M++ ++ +L++ L+ D +ER
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQ--DPRER 529
Score = 60 (26.2 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
+T LGR LS +PVD L +M++ ++ +L++ L+ D +ER
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQ--DPRER 529
Score = 56 (24.8 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T LGR LS +PVD L +M++ ++ +L++ L+
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLS 522
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDI 952
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDI 1002
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDI 1052
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 38 (18.4 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 36/167 (21%), Positives = 62/167 (37%)
Query: 1193 DVTILKVILASGLYPQVAIG-DEFNTSETVKEA-LFHCKDKGFVSLHPFSVFTSQPD--V 1248
D IL+ LAS + +AIG + ++ H +D GF+ L Q V
Sbjct: 423 DPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRD-GFLLLEELQAVKQQKGNIV 481
Query: 1249 LRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSS 1308
L + P +L R VI S HQL +L + + R +
Sbjct: 482 LTPLGRQLSQIPVDPRL-ARMVIES-HQLGCLNEVLVIASGLSIQDPRERPMDKKQASDE 539
Query: 1309 AIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFM 1355
A +D + F SW+ ++ L+E + +Q + + ++
Sbjct: 540 AHRRFAD-PQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYL 585
Score = 37 (18.1 bits), Expect = 3.3e-77, Sum P(4) = 3.3e-77
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
PG + + ++ L+ETSK F C ++
Sbjct: 651 PGSPLAKKGPKWIMAAELMETSKLFARCCAKI 682
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 637 (229.3 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 156/461 (33%), Positives = 256/461 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ +D +L YD +++DE HER L+ DF+LG +K +L ++KII+ SATI++E F +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKH 239
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
FN A II+V GR YP++ Y P+V+ ++++ G I + +D+ GD+L
Sbjct: 240 FNN-APIIEVSGRTYPVETRYRPLVQDTEADLDQIE-G----IFAAVDELVAEG-LGDIL 292
Query: 430 IFMSGISEISSIVRAAQEYNEKS-QGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTN 488
IFM+G EI A++ N ++ + +LPL++ LS EQ +VF + G R+ +++TN
Sbjct: 293 IFMNGEREIRD---TAEQLNRRNYRDTEILPLYARLSYGEQSKVFS-SHTG-RRIVLATN 347
Query: 489 IAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCY 548
+AETS+T+ GIR+V+D G + Y K+ L IS+ASA QR+GR GR GPG+C
Sbjct: 348 VAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICI 407
Query: 549 RLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSL 608
RLY E ++ ++ PEI R ++ S++L ++ +GLGD+ FPF+E P +I L
Sbjct: 408 RLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLL 467
Query: 609 TQHGAIDSKER---VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+ A+ ++ +T LGR LS +PVD L +M++ ++ VL +A+ LS+Q P
Sbjct: 468 EELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPR 527
Query: 666 TNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRS--KKWCKRRGIEEQRF 723
+ + A + D ++ +N ++ +K+ S +K C+ + R
Sbjct: 528 ERPMDKKQASDEAHRRFADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRV 587
Query: 724 YEVTKLRSQFKQVLGD-SGLITDIPGPDASLSSRERALRHG 763
E L +Q KQ + D + D P A+ + RAL G
Sbjct: 588 REWQDLYTQLKQAVHDLKWRLNDTP---ANYDALHRALLSG 625
Score = 196 (74.1 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 43/132 (32%), Positives = 74/132 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R GPG+C RLY E ++ ++ PEI R ++ S++L ++ +GLGD+ FPF+E P +
Sbjct: 400 RVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRH 459
Query: 869 IESSVRSLTQHGAIDSKER---VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
I L + A+ ++ +T LGR LS +PVD L +M++ ++ +L++
Sbjct: 460 IRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIAS 519
Query: 926 ALNFGAIDSKER 937
L+ D +ER
Sbjct: 520 GLSIQ--DPRER 529
Score = 193 (73.0 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 46/123 (37%), Positives = 74/123 (60%)
Query: 23 EKFSTLMKIRETQN---SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
EK +K R N +LPV+ +++I + +VVIIAG+TG GK+TQ+P+ ++ G
Sbjct: 58 EKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELG 117
Query: 80 F-QR--IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
R I TQPRR+A S++ RVA E S +VG+++RF + ++ I +T+G+L
Sbjct: 118 LGSRGFIGHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGIL 177
Query: 137 LRQ 139
L +
Sbjct: 178 LAE 180
Score = 158 (60.7 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ +D +L YD +++DE HER L+ DF+LG +K +L ++KII+ SATI++E F +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKH 239
Query: 1175 FNRIAKDLLSGST 1187
FN +SG T
Sbjct: 240 FNNAPIIEVSGRT 252
Score = 94 (38.1 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+ +D +L YD +++DE HER L+ DF+LG +K +L
Sbjct: 181 LTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQIL 216
Score = 88 (36.0 bits), Expect = 3.3e-77, Sum P(4) = 3.3e-77
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ +D +L YD +I+DE HER L DF+LG +
Sbjct: 180 ELTSDRYLDQYDTIIIDEAHERSLNIDFILGYL 212
Score = 60 (26.2 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
+T LGR LS +PVD L +M++ ++ +L++ L+ D +ER
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQ--DPRER 529
Score = 60 (26.2 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
+T LGR LS +PVD L +M++ ++ +L++ L+ D +ER
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQ--DPRER 529
Score = 56 (24.8 bits), Expect = 1.9e-14, Sum P(4) = 1.9e-14
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T LGR LS +PVD L +M++ ++ +L++ L+
Sbjct: 482 LTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLS 522
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDI 952
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDI 1002
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 43 (20.2 bits), Expect = 7.8e-78, Sum P(4) = 7.8e-78
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDI 1052
L +NF D K ++ + GR L L ++
Sbjct: 964 LQMNFKIEDDKGKLVAQGRVLDSLKAEL 991
Score = 38 (18.4 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 36/167 (21%), Positives = 62/167 (37%)
Query: 1193 DVTILKVILASGLYPQVAIG-DEFNTSETVKEA-LFHCKDKGFVSLHPFSVFTSQPD--V 1248
D IL+ LAS + +AIG + ++ H +D GF+ L Q V
Sbjct: 423 DPEILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRD-GFLLLEELQAVKQQKGNIV 481
Query: 1249 LRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSS 1308
L + P +L R VI S HQL +L + + R +
Sbjct: 482 LTPLGRQLSQIPVDPRL-ARMVIES-HQLGCLNEVLVIASGLSIQDPRERPMDKKQASDE 539
Query: 1309 AIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFM 1355
A +D + F SW+ ++ L+E + +Q + + ++
Sbjct: 540 AHRRFAD-PQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYL 585
Score = 37 (18.1 bits), Expect = 3.3e-77, Sum P(4) = 3.3e-77
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
PG + + ++ L+ETSK F C ++
Sbjct: 651 PGSPLAKKGPKWIMAAELMETSKLFARCCAKI 682
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 612 (220.5 bits), Expect = 9.6e-78, Sum P(4) = 9.6e-78
Identities = 168/516 (32%), Positives = 272/516 (52%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D LSS +VLDEIHER+L D L+ V+K LL ++ ++ + E
Sbjct: 323 SDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGN 382
Query: 332 ----HLHGDFLLGVIKCLLHSTAE-VKIILMSATINIEL----FHTYFNRIAK-----II 377
H+ G F V++ LL E ++ + + + NR K I
Sbjct: 383 CPMIHIPG-FTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKKGFMQGHVNRQEKEEKEAIY 441
Query: 378 KV--PGRLYPIQLEYHP-IVEL-DRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K PG L ++ Y V++ + EK+D I ++I E G +L+F+
Sbjct: 442 KERWPGYLRELRQRYSASTVDVVEMMDDEKVDLN---LIAALIRYIVLEEEDGAILVFLP 498
Query: 434 GISEISSIVRAAQ-EYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
G IS++ + KS +I++PLHS + Q +VF P G+RK +++TNIAET
Sbjct: 499 GWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAET 558
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
SITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 559 SITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN 618
Query: 553 EEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQ 610
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S++ L +
Sbjct: 619 SLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLME 678
Query: 611 HGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF 670
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF
Sbjct: 679 LNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG 738
Query: 671 RDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTK 728
++ + RKEL + D LTV+NA+K W K+ R +K +C + +
Sbjct: 739 KEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHN 798
Query: 729 LRSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
++ QF + L +G ++ P P+++++S E+ ++
Sbjct: 799 MKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIK 834
Score = 206 (77.6 bits), Expect = 5.1e-32, Sum P(4) = 5.1e-32
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 607 RVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSN 666
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 667 EAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 726
Query: 927 LNF 929
L+F
Sbjct: 727 LSF 729
Score = 191 (72.3 bits), Expect = 9.6e-78, Sum P(4) = 9.6e-78
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 189 DLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 248
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 249 NYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS 308
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 309 ILYCTTGIILQ 319
Score = 145 (56.1 bits), Expect = 5.5e-23, Sum P(3) = 5.5e-23
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D LSS +VLDEIHER+L D L+ V+K LL ++K++LMSAT+N E F YF
Sbjct: 323 SDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGN 382
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 383 CPMIHIPGFT 392
Score = 105 (42.0 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 920 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+L + + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 670 LLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 729
Score = 105 (42.0 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 970 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+L + + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 670 LLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 729
Score = 105 (42.0 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 1020 MLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+L + + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 670 LLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 729
Score = 77 (32.2 bits), Expect = 9.6e-78, Sum P(4) = 9.6e-78
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPD 1247
I+K ++ +GLYP+VA N + K + K G V++HP SV Q +
Sbjct: 832 IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTE 882
Score = 73 (30.8 bits), Expect = 9.6e-78, Sum P(4) = 9.6e-78
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+D LSS ++LDE+HER+L D L+ V+
Sbjct: 323 SDPHLSSVSHIVLDEIHERNLQSDVLMTVV 352
Score = 47 (21.6 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLR--MPALQTLLLFSSAIHTNSDFTRLVFD 1322
LPG + IS+ H LL+ + ++ K F++ L MP + +F T ++V
Sbjct: 497 LPGWDNISTLHDLLMSQVMFKSDK-FIIIPLHSLMPTVNQTQVFK---RTPPGVRKIVIA 552
Query: 1323 SWI-EVFVPLQEAKSTADVNQLE--HSLTRDLVQFMSS 1357
+ I E + + + D +++ H T++ + MS+
Sbjct: 553 TNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSA 590
Score = 42 (19.8 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 443 RAAQEYNEKSQGWIVLPLHSTLSLEEQD---RVFHYAPE 478
RA +E+ + IV LHS + ++D ++ +APE
Sbjct: 85 RAVVHMDERREEQIVQLLHSVQTKNDKDEEAQISWFAPE 123
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 508 (183.9 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 115/351 (32%), Positives = 193/351 (54%)
Query: 426 GDVLIFMSG---ISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRV-------FHY 475
G +L+F+ G IS ++ ++ + Q + +I++PLHS + Q +V F
Sbjct: 503 GAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKK 562
Query: 476 APEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQR 535
P G+RK +++TNIAETSITID + +V+D GK+KE +D + T+ W+S A+A+QR
Sbjct: 563 PPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQR 622
Query: 536 KGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFL 593
KGRAGR PG CY LY+ + SLL Y PEI+R ++ L L + + LG + F +
Sbjct: 623 KGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTM 682
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
+ P IE ++ L A+D E++T LG L+ +PV+ +GKM++FG++ +D VL
Sbjct: 683 DPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVL 742
Query: 654 SLAAVLSVQSPFTNRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVR-SKK 711
++AA LS + PF ++ + RK N D L+++NA+ W K+ R ++
Sbjct: 743 TIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSDHLSIVNAFLGWEDAKRQGSRFERE 802
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLIT--DIPGPDASLSSRERAL 760
+C + + ++ QF + L +G + D P ++++S + L
Sbjct: 803 YCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSSNINSENKKL 853
Score = 196 (74.1 bits), Expect = 1.2e-42, Sum P(5) = 1.2e-42
Identities = 42/123 (34%), Positives = 70/123 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL Y PEI+R ++ L L + + LG + F ++ P
Sbjct: 628 RVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSD 687
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
IE ++ L A+D E++T LG L+ +PV+ +GKM++FG++ +D +L + +
Sbjct: 688 RAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAAS 747
Query: 927 LNF 929
L+F
Sbjct: 748 LSF 750
Score = 194 (73.4 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV- 76
D ++KE + +++ + + LP ++E++ + RV++I+G+TGCGK+TQ+ Q+++
Sbjct: 200 DQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILD 259
Query: 77 ------QAGFQRIACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
Q R+ CTQPRRI+ IS+++RVA E GYQIR + R++
Sbjct: 260 DFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGS 319
Query: 128 IVFITEGLLLR 138
+++ T G++L+
Sbjct: 320 LLYCTTGVILQ 330
Score = 180 (68.4 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 45/100 (45%), Positives = 61/100 (61%)
Query: 299 GVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMS 358
GVI LHS D +LSS LVLDEIHER + D L+ ++K LL + ++K++LMS
Sbjct: 326 GVILQWLHS------DPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMS 379
Query: 359 ATINIELFHTYFNRIAKIIKVPGRLYPIQLEY--HPIVEL 396
AT+N E F YFN +I +PG +P+ EY +VEL
Sbjct: 380 ATLNAEKFSKYFNN-CPMIHIPGYTFPVT-EYLLEDVVEL 417
Score = 152 (58.6 bits), Expect = 2.5e-24, Sum P(4) = 2.5e-24
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D +LSS LVLDEIHER + D L+ ++K LL + ++K++LMSAT+N E F YFN
Sbjct: 334 SDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNN 393
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 394 CPMIHIPGYT 403
Score = 96 (38.9 bits), Expect = 1.8e-32, Sum P(5) = 1.8e-32
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
++ A+D E++T LG L+ +PV+ +GKM++FG++ +D +L + +L+F
Sbjct: 698 VDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSF 750
Score = 96 (38.9 bits), Expect = 1.8e-32, Sum P(5) = 1.8e-32
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
++ A+D E++T LG L+ +PV+ +GKM++FG++ +D +L + +L+F
Sbjct: 698 VDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSF 750
Score = 96 (38.9 bits), Expect = 1.8e-32, Sum P(5) = 1.8e-32
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
++ A+D E++T LG L+ +PV+ +GKM++FG++ +D +L + +L+F
Sbjct: 698 VDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSF 750
Score = 85 (35.0 bits), Expect = 9.6e-68, Sum P(5) = 9.6e-68
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D +LSS LVLDEIHER + D L+ ++K LL
Sbjct: 334 SDPYLSSITHLVLDEIHERSVQSDILITIVKDLL 367
Score = 73 (30.8 bits), Expect = 1.7e-66, Sum P(5) = 1.7e-66
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+D +LSS L+LDE+HER + D L+ ++
Sbjct: 334 SDPYLSSITHLVLDEIHERSVQSDILITIV 363
Score = 69 (29.3 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 1179 AKDLLSGSTARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLH 1237
+KD S+ + ++ ++K ++ +GLYP+VA I N + ++ K G V +H
Sbjct: 836 SKDPKDPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVY-TKADGKVCIH 894
Query: 1238 PFSV 1241
P SV
Sbjct: 895 PKSV 898
Score = 58 (25.5 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 1274 KHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSS--AIHTNSDFTRLVFDSWIEVF 1328
+++ LVY ++T+ FL +C + +LL F +I + D + D WI VF
Sbjct: 906 QYKWLVYHLKMKTTSIFLYDCTEVSPF-SLLFFGGNISIQRDQDQDTIAVDEWI-VF 960
Score = 45 (20.9 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 16/68 (23%), Positives = 30/68 (44%)
Query: 696 YKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDI-PGPDASLS 754
Y +W G+KK + ++E R +T+L + ++ LG D+ P S
Sbjct: 73 YAKWGGIKKSEAERRSRAVVH-MDESREKHITQLLNTVQRDLG-----RDVHPSTSQSWR 126
Query: 755 SRERALRH 762
+++ A H
Sbjct: 127 NKDEARGH 134
Score = 44 (20.5 bits), Expect = 1.2e-24, Sum P(4) = 1.2e-24
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 1234 VSLHPFSVFTSQPDVLRISEDDIVDPPPGLK 1264
+ LH SQ V+ + PPPG++
Sbjct: 538 IPLHSLMPTVSQTQVISLFPQVFKKPPPGVR 568
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 546 (197.3 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 140/446 (31%), Positives = 235/446 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKY 420
FN+ I+ V GR +P+ + Y D KS + +++ K
Sbjct: 220 FNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKST---------VETVV--KI 268
Query: 421 PRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDRV 472
+TE GDVL F++G E+ ++V RA K VLP+++ L EQ +V
Sbjct: 269 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH-LRVLPMYAGLPSFEQMKV 327
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+ASA
Sbjct: 328 FERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASA 387
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPF 592
QR GR GR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F
Sbjct: 388 NQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 447
Query: 593 LEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+LS+AA++ +Q+ F + ++ GD LT+LN Y+ ++ KD K
Sbjct: 508 ILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKD----SK 563
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVL 737
WC+ + + +R Q K++L
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLL 589
Score = 218 (81.8 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 46/116 (39%), Positives = 74/116 (63%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ + + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ + T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Score = 164 (62.8 bits), Expect = 6.1e-29, Sum P(3) = 6.1e-29
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 396 RSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 122 (48.0 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 80 (33.2 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLL 192
Score = 77 (32.2 bits), Expect = 7.6e-77, Sum P(3) = 7.6e-77
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y V++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLK 193
Score = 41 (19.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS-LHPF 1239
D+ G + K L++I+AS D FN +ET A C P
Sbjct: 186 DIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPV 245
Query: 1240 SVFTSQ---PDVLRISEDDIV 1257
+F Q PD ++ + + +V
Sbjct: 246 DIFYLQSPVPDYIKSTVETVV 266
Score = 40 (19.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + ++TV+K + GD G + Q V+ + Q R +A + +
Sbjct: 253 PVPDYIKSTVETVVK--IHQTEGD-GDVLAFLTGQEEVETVVSMLI-EQARALARTGMKR 308
Query: 99 RVAYETLSQYSNLVGY-QIR-FEKHRREKTKIVFIT 132
+ L Y+ L + Q++ FE+ R K++ T
Sbjct: 309 HL--RVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFVKLRAYNPRTAIECL 377
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 546 (197.3 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 140/446 (31%), Positives = 235/446 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKY 420
FN+ I+ V GR +P+ + Y D KS + +++ K
Sbjct: 220 FNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKST---------VETVV--KI 268
Query: 421 PRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDRV 472
+TE GDVL F++G E+ ++V RA K VLP+++ L EQ +V
Sbjct: 269 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH-LRVLPMYAGLPSFEQMKV 327
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+ASA
Sbjct: 328 FERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASA 387
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPF 592
QR GR GR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F
Sbjct: 388 NQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 447
Query: 593 LEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+LS+AA++ +Q+ F + ++ GD LT+LN Y+ ++ KD K
Sbjct: 508 ILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKD----SK 563
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVL 737
WC+ + + +R Q K++L
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLL 589
Score = 218 (81.8 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 46/116 (39%), Positives = 74/116 (63%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ + + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ + T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Score = 164 (62.8 bits), Expect = 7.2e-29, Sum P(3) = 7.2e-29
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 396 RSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 122 (48.0 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 80 (33.2 bits), Expect = 3.7e-77, Sum P(3) = 3.7e-77
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLL 192
Score = 77 (32.2 bits), Expect = 7.6e-77, Sum P(3) = 7.6e-77
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y V++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLK 193
Score = 41 (19.5 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS-LHPF 1239
D+ G + K L++I+AS D FN +ET A C P
Sbjct: 186 DIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPV 245
Query: 1240 SVFTSQ---PDVLRISEDDIV 1257
+F Q PD ++ + + +V
Sbjct: 246 DIFYLQSPVPDYIKSTVETVV 266
Score = 40 (19.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + ++TV+K + GD G + Q V+ + Q R +A + +
Sbjct: 253 PVPDYIKSTVETVVK--IHQTEGD-GDVLAFLTGQEEVETVVSMLI-EQARALARTGMKR 308
Query: 99 RVAYETLSQYSNLVGY-QIR-FEKHRREKTKIVFIT 132
+ L Y+ L + Q++ FE+ R K++ T
Sbjct: 309 HL--RVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFVKLRAYNPRTAIECL 377
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 593 (213.8 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 156/457 (34%), Positives = 238/457 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D LS Y ++++DE HER + D LLG++K + E++II+ SAT+ E F +
Sbjct: 126 EALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAF 185
Query: 370 FNR---------------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILS 414
F+ I I+ + GR YPI + Y L+ + L R +S
Sbjct: 186 FSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILY-----LESPAEDYLQ-----RAVS 235
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQD 470
+ + GD+L+F++G EI + V A E + +G + LPL S LS E+Q
Sbjct: 236 TVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQM 295
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
+F AP RK I STNIAE S+TI GI +VVDSG VK +Y+ + TL ISKA
Sbjct: 296 YIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKA 355
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF 590
+A QR GRAGRT PG C+RLY+EE Y+ L++ + PE++R ++ +L L +G+ +V F
Sbjct: 356 AAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHF 415
Query: 591 PFLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQI 649
FL PPAE + ++ L GA+D ++T LG +++L VD + K L+ F +
Sbjct: 416 DFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCL 475
Query: 650 DTVLSLAAVLSVQSP-FTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVR 708
+L++AA+ S + E+ R++ + GD LT LN Y+ + V K R
Sbjct: 476 SEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAF--VTKGRKE 533
Query: 709 SKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITD 745
S +C + + +R+Q K+ L G+ D
Sbjct: 534 SG-FCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVD 569
Score = 225 (84.3 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 26 STLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----Q 81
S + + + + LP+A++K ++ V V ++ G TG GK+TQIPQ+L +AG+ +
Sbjct: 9 SFIPALHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGK 68
Query: 82 RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I TQPRRIA +++ RVA E S+ VGY IRFE E T+I F+T+GLL+R+
Sbjct: 69 LIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIRE 126
Score = 190 (71.9 bits), Expect = 9.6e-33, Sum P(3) = 9.6e-33
Identities = 41/116 (35%), Positives = 68/116 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG C+RLY+EE Y+ L++ + PE++R ++ +L L +G+ +V F FL PPAE
Sbjct: 366 RTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAEL 425
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ L GA+D ++T LG +++L VD + K L+ F + ML +
Sbjct: 426 MTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTI 481
Score = 128 (50.1 bits), Expect = 0.00035, P = 0.00035
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R E + + + D ++ A D LS Y ++++DE HER + D LLG++K +
Sbjct: 104 RFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRK 163
Query: 1153 STAEVKIILMSATINIELFHTYFNRIAKDLLSGSTA-RSHKDVTILKVILASG-LYP 1207
E++II+ SAT+ E F +F+ L GS R TI ++ G YP
Sbjct: 164 KRPELRIIISSATLQAEQFLAFFS----STLGGSRQDREEPQGTIGTIVSLEGRTYP 216
Score = 83 (34.3 bits), Expect = 9.6e-33, Sum P(3) = 9.6e-33
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS------PPLHC--GGEIVAADYFLSS 278
+ D LS Y I+++DE HER + D LLG++ P L + A+ FL+
Sbjct: 126 EALVDPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAF 185
Query: 279 YDVLVLDEIHERHLHGDFLLGVIKCLLHST-------VEVAADNFLSSYDVLVLDEIHER 331
+ + +R +G I L T +E A+++L VLD +HE
Sbjct: 186 FSSTLGGSRQDRE-EPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLD-VHEN 243
Query: 332 HLHGDFLL 339
GD L+
Sbjct: 244 EPDGDILV 251
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 533 (192.7 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 132/356 (37%), Positives = 201/356 (56%)
Query: 396 LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIV---RAAQEYNEKS 452
L R +++D ++ ID E G +LIF+ G++EI ++ A+ + +
Sbjct: 889 LKRLNEDRIDYELLEELICHIDDT---CEEGAILIFLPGVAEIYMLLDMLAASYRFRGPA 945
Query: 453 QGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMS 512
W+ LPLHS+++ EQ +VF P+GLRK I +TNIAETSITID + +V+DSGK KE
Sbjct: 946 ADWL-LPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENR 1004
Query: 513 YDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVS 571
Y+ K+S++ E WIS+A+A QR GRAGR PG+C+ LY+ ++ L+ Y PE+ R+
Sbjct: 1005 YNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMP 1064
Query: 572 IDSLLLSLVCMGLGDVRKFPFLEA---PPAENIESSVRSLTQH-GAIDSKERVTSLGRFL 627
+ L L + +GLG ++ PFL PP+E +S SL GA++ E +T LG L
Sbjct: 1065 LVELCLQIKLLGLGHIK--PFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHL 1122
Query: 628 SDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHG 687
+ LPVD+ +GKML++G +F + +LS+AA LS +SPF + + + L S++G
Sbjct: 1123 AKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNG 1182
Query: 688 DPLTVLNAYKEWLGVKKDRVRSKKWCK---RRGIEE-QRFYEVTKLRSQFKQVLGD 739
+ LN V KW K RG++ QRF E L S +++ D
Sbjct: 1183 VSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRD 1238
Score = 243 (90.6 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 51/134 (38%), Positives = 87/134 (64%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-- 77
K+ +K+ ++K T+ +LP+++ K I+ + ++ V+++ G+TG GK+TQ+PQ+++
Sbjct: 599 KRTQKYKDMLK---TRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDM 655
Query: 78 -----AGFQRIACTQPRRIACISLSKRVAYETLSQY----SNLVGYQIRFEKHRREKTKI 128
G+ I CTQPRRIA IS+++RVA E +LVGYQ+R E R +KT++
Sbjct: 656 IDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRL 715
Query: 129 VFITEGLLLRQDSG 142
+F T G+LLR+ +G
Sbjct: 716 LFCTTGILLRKLAG 729
Score = 199 (75.1 bits), Expect = 6.7e-41, Sum P(3) = 6.7e-41
Identities = 44/126 (34%), Positives = 73/126 (57%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA---P 864
R PG+C+ LY+ ++ L+ Y PE+ R+ + L L + +GLG ++ PFL P
Sbjct: 1033 RVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIK--PFLSRALEP 1090
Query: 865 PAENIESSVRSLTQH-GAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
P+E +S SL GA++ E +T LG L+ LPVD+ +GKML++G +F + +L +
Sbjct: 1091 PSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSI 1150
Query: 924 DLALNF 929
L++
Sbjct: 1151 AAFLSY 1156
Score = 194 (73.4 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 53/179 (29%), Positives = 94/179 (52%)
Query: 596 PPAENIESSVRSLTQH-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLS 654
PP+E +S SL GA++ E +T LG L+ LPVD+ +GKML++G +F + +LS
Sbjct: 1090 PPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILS 1149
Query: 655 LAAVLSVQSPFTNRAFRDPDCETARKELESNHG-------------DPLTVLNAYKEWLG 701
+AA LS +SPF + + + L S++G D L ++ AY +W+
Sbjct: 1150 IAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVK 1209
Query: 702 VKKDR--VRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRER 758
+ ++R ++++C+ + + + +R QF +L D GLI ++P S R++
Sbjct: 1210 ILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLI-NLP-KTGEFSGRKK 1266
Score = 163 (62.4 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 79/351 (22%), Positives = 150/351 (42%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVH- 1081
+ L GA++ E +T LG L+ LPVD+ +GKML++G +F + +L + L++
Sbjct: 1100 ISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSP 1159
Query: 1082 --HSXXXXXXXAGERLESMDANEVEFR-LKHDPKQVQVAADNFLS--SYD--VLVLDE-- 1132
+ +L + N V L ++ +Q +D+ L +YD V +L E
Sbjct: 1160 FIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQ----SDHLLMMVAYDKWVKILQERG 1215
Query: 1133 --IHERHLHGDFLLG-VIKCLLHSTAEVKIILMS-ATINIELFHTYFNRIAKDL---LSG 1185
+R FL V++ + + +L IN+ + R ++L S
Sbjct: 1216 MKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSD 1275
Query: 1186 STARSH---KDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
T + + ++K IL +GLYP +A D+ + E F+ K +S +
Sbjct: 1276 PTQPFNMYSQQPEVVKAILCAGLYPNIAANDK-----GITETTFNSLTKQGNQTKSYSAW 1330
Query: 1243 TSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQT 1302
+ I I N + ++ LV++ +ET+K +L + + +
Sbjct: 1331 YDGRREVHIHPSSI----------NSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPF-S 1379
Query: 1303 LLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQ 1353
+LLF +I+ + + D W++V P Q A ++ HS+ +DL++
Sbjct: 1380 ILLFGGSINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIR 1430
Score = 148 (57.2 bits), Expect = 5.3e-77, Sum P(3) = 5.3e-77
Identities = 31/87 (35%), Positives = 54/87 (62%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL------HSTAEVKIILMSATINI 363
++A D L+ +++DE+HER L GDFLL ++K L+ +++ ++K+ILMSAT++
Sbjct: 726 KLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDA 785
Query: 364 ELFHTYFNRIAKIIKVPGRLYPIQLEY 390
+LF YF +I GR +P+ +
Sbjct: 786 DLFSRYFGH-CPVITAQGRTHPVTTHF 811
Score = 131 (51.2 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL------HSTAEVKIILMSATINI 1168
++A D L+ +++DE+HER L GDFLL ++K L+ +++ ++K+ILMSAT++
Sbjct: 726 KLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDA 785
Query: 1169 ELFHTYFNRIAKDLLSGST 1187
+LF YF G T
Sbjct: 786 DLFSRYFGHCPVITAQGRT 804
Score = 102 (41.0 bits), Expect = 8.1e-31, Sum P(3) = 8.1e-31
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ L GA++ E +T LG L+ LPVD+ +GKML++G +F + +L + L++
Sbjct: 1100 ISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSY 1156
Score = 102 (41.0 bits), Expect = 8.1e-31, Sum P(3) = 8.1e-31
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ L GA++ E +T LG L+ LPVD+ +GKML++G +F + +L + L++
Sbjct: 1100 ISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSY 1156
Score = 83 (34.3 bits), Expect = 3.5e-70, Sum P(3) = 3.5e-70
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVL 325
+A D L+ +++DE+HER L GDFLL ++K L+ + DN V+++
Sbjct: 727 LAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQ---SCDNTSRKLKVILM 779
Score = 77 (32.2 bits), Expect = 1.5e-69, Sum P(3) = 1.5e-69
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++A D L+ +I+DEVHER L GDFLL ++
Sbjct: 726 KLAGDRTLNDVTHIIVDEVHERSLLGDFLLIIL 758
Score = 53 (23.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 697 KEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGL 742
KE+ + D +++K+ +RG +EQ + KL KQ + D GL
Sbjct: 230 KEYYSARSDAIKAKEKRDKRG-QEQAGLAIRKL----KQEISDLGL 270
Score = 41 (19.5 bits), Expect = 7.7e-56, Sum P(3) = 7.7e-56
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVV 57
K KEK K + Q L + + KQEI D L E ++
Sbjct: 241 KAKEKRD---KRGQEQAGLAIRKLKQEISDLGLSEAML 275
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 570 (205.7 bits), Expect = 1.2e-76, Sum P(4) = 1.2e-76
Identities = 141/433 (32%), Positives = 237/433 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA--EVKIILMSATINIELFH 367
E D L Y +++DE HER L + LL ++K ++ +T ++KII+ SATIN E F
Sbjct: 335 EFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFS 394
Query: 368 TYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR--ILSIIDKKYPRTER 425
+FN A I+ +PGR +P+++ Y TK + + YI+ I +I +
Sbjct: 395 QFFNN-APILNIPGRRFPVKIHY--------TKQPEAN---YIQAAITTIFQIHMTQPLP 442
Query: 426 GDVLIFMSGISEISS---IVR-AAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLR 481
GD+L+F++G EI + I+R + + ++ IV +++ L E Q ++F P R
Sbjct: 443 GDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTR 502
Query: 482 KCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGR 541
K +++TNIAETSITIDGI +V+D G VK+ Y+ T M +L S+ASA+QR GRAGR
Sbjct: 503 KIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGR 562
Query: 542 TGPGVCYRLYSEEQ-YSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 600
GPG C+RL+++ Y+ L PEI+RV++ S++L L+ +G+ D+ F F++ P E
Sbjct: 563 VGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEA 622
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
I ++ L GA++++ ++T G+ +S+ P+D K ++ F ++S+ A+L+
Sbjct: 623 IIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLN 682
Query: 661 VQSPFTNRAFRDPDCETARK-ELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIE 719
S R + RK E GD +L +++W+ D S +WC+ I+
Sbjct: 683 ESSNLFYRPKDKKELADKRKQEFNDLQGDQFMLLKIWQQWV----DSGYSVQWCQDYFIQ 738
Query: 720 EQRFYEVTKLRSQ 732
+ + + Q
Sbjct: 739 YKTMKRIKNIYEQ 751
Score = 248 (92.4 bits), Expect = 1.2e-76, Sum P(4) = 1.2e-76
Identities = 48/115 (41%), Positives = 77/115 (66%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
K E + SLPV Y++E + + + + +I+ G+TG GK+TQ+PQYL +AG+ R IAC
Sbjct: 221 KYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIAC 280
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIV-FITEGLLLRQ 139
TQPRR+A S++ RVA E + VGY IRF+ + ++ ++ ++T+G+LLR+
Sbjct: 281 TQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLRE 335
Score = 168 (64.2 bits), Expect = 5.1e-31, Sum P(4) = 5.1e-31
Identities = 36/121 (29%), Positives = 69/121 (57%)
Query: 809 RTGPGVCYRLYSEEQ-YSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R GPG C+RL+++ Y+ L PEI+RV++ S++L L+ +G+ D+ F F++ P E
Sbjct: 562 RVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKE 621
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
I ++ L GA++++ ++T G+ +S+ P+D K ++ F ++ + L
Sbjct: 622 AIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAML 681
Query: 928 N 928
N
Sbjct: 682 N 682
Score = 116 (45.9 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA--EVKIILMSATINIELFHTYFN 1176
D L Y +++DE HER L + LL ++K ++ +T ++KII+ SATIN E F +FN
Sbjct: 339 DPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFN 398
Score = 66 (28.3 bits), Expect = 1.2e-76, Sum P(4) = 1.2e-76
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHST 308
D L Y +++DE HER L + LL ++K ++ +T
Sbjct: 339 DPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTT 374
Score = 59 (25.8 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
L+L GA++++ ++T G+ +S+ P+D K ++ F ++ + LN
Sbjct: 627 LNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLN 682
Score = 59 (25.8 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
L+L GA++++ ++T G+ +S+ P+D K ++ F ++ + LN
Sbjct: 627 LNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLN 682
Score = 59 (25.8 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
L+L GA++++ ++T G+ +S+ P+D K ++ F ++ + LN
Sbjct: 627 LNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLN 682
Score = 57 (25.1 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L Y +++DE HER L + LL ++
Sbjct: 339 DPTLGKYSAIMIDEAHERTLSTEILLSLL 367
Score = 49 (22.3 bits), Expect = 1.2e-76, Sum P(4) = 1.2e-76
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 1271 ISSKHQLLVYMSLLETSKPFLVNCL 1295
+ K + L+Y L+ TSK ++ NC+
Sbjct: 830 LKPKPKYLLYYELVLTSKEYMRNCI 854
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 543 (196.2 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 140/447 (31%), Positives = 235/447 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ I+ V GR +P+ + Y L P P YI+ K
Sbjct: 220 FNQNETSDPARDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKATVDTVVK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V RA K VLP+++ L EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH-LRVLPMYAGLPSFEQMK 326
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G +K +Y+ + L +S+AS
Sbjct: 327 VFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQAS 386
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GR GR G CYRLY+EE + L + + PE++R ++ ++L L +G+ V +F
Sbjct: 387 ANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFH 446
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 447 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 506
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + + ++ GD LT+LN Y+ + +K ++ S
Sbjct: 507 EILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF--IKHNK--SS 562
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLL 589
Score = 214 (80.4 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 46/116 (39%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ V + V+I G+TGCGKSTQ+PQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Score = 161 (61.7 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 34/107 (31%), Positives = 61/107 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G CYRLY+EE + L + + PE++R ++ ++L L +G+ V +F F+ PPA++
Sbjct: 396 RNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 124 (48.7 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 79 (32.9 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLL 192
Score = 76 (31.8 bits), Expect = 5.4e-76, Sum P(3) = 5.4e-76
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y V++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSVVMLDEAHERTLYTDIAIGLLK 193
Score = 47 (21.6 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 21/81 (25%), Positives = 32/81 (39%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS-LHPF 1239
D+ G + K L++I+AS D FN +ET A C P
Sbjct: 186 DIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPV 245
Query: 1240 SVFTSQ---PDVLRISEDDIV 1257
+F Q PD ++ + D +V
Sbjct: 246 DIFYLQSPVPDYIKATVDTVV 266
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFMKLRAYNPRTAIECL 377
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + +DTV+K + GD G + Q V+ + Q R +A + K
Sbjct: 253 PVPDYIKATVDTVVK--IHQTEGD-GDILAFLTGQEEVETVVSMLI-EQARALARTGMKK 308
Query: 99 RVAYETLSQYSNLVGY-QIR-FEKHRREKTKIVFIT 132
+ L Y+ L + Q++ FE+ K++ T
Sbjct: 309 HL--RVLPMYAGLPSFEQMKVFERVSHSVRKVIVAT 342
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 543 (196.2 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 140/447 (31%), Positives = 235/447 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ I+ V GR +P+ + Y L P P YI+ K
Sbjct: 220 FNQNETSDPARDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKATVDTVVK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V RA K VLP+++ L EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH-LRVLPMYAGLPSFEQMK 326
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G +K +Y+ + L +S+AS
Sbjct: 327 VFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQAS 386
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GR GR G CYRLY+EE + L + + PE++R ++ ++L L +G+ V +F
Sbjct: 387 ANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFH 446
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 447 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 506
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + + ++ GD LT+LN Y+ + +K ++ S
Sbjct: 507 EILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAF--IKHNK--SS 562
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 563 QWCQEHFLNYKGLVRAATVRDQLKKLL 589
Score = 214 (80.4 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 46/116 (39%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ V + V+I G+TGCGKSTQ+PQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Score = 161 (61.7 bits), Expect = 5.1e-28, Sum P(3) = 5.1e-28
Identities = 34/107 (31%), Positives = 61/107 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G CYRLY+EE + L + + PE++R ++ ++L L +G+ V +F F+ PPA++
Sbjct: 396 RNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 124 (48.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 79 (32.9 bits), Expect = 2.6e-76, Sum P(3) = 2.6e-76
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLL 192
Score = 76 (31.8 bits), Expect = 5.4e-76, Sum P(3) = 5.4e-76
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y V++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSVVMLDEAHERTLYTDIAIGLLK 193
Score = 47 (21.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 21/81 (25%), Positives = 32/81 (39%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS-LHPF 1239
D+ G + K L++I+AS D FN +ET A C P
Sbjct: 186 DIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPV 245
Query: 1240 SVFTSQ---PDVLRISEDDIV 1257
+F Q PD ++ + D +V
Sbjct: 246 DIFYLQSPVPDYIKATVDTVV 266
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFMKLRAYNPRTAIECL 377
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + +DTV+K + GD G + Q V+ + Q R +A + K
Sbjct: 253 PVPDYIKATVDTVVK--IHQTEGD-GDILAFLTGQEEVETVVSMLI-EQARALARTGMKK 308
Query: 99 RVAYETLSQYSNLVGY-QIR-FEKHRREKTKIVFIT 132
+ L Y+ L + Q++ FE+ K++ T
Sbjct: 309 HL--RVLPMYAGLPSFEQMKVFERVSHSVRKVIVAT 342
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 543 (196.2 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 139/447 (31%), Positives = 237/447 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y ++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN I+ V GR +P+ + Y L P P YI+ K
Sbjct: 220 FNHNDTSDPTRDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKSTVETVMK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V RA + K +LP+++ L EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRH-LRILPMYAGLPSFEQMK 326
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 386
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GR GR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F
Sbjct: 387 ANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFH 446
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 447 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 506
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + + A ++ GD LT+LN Y+ + +K ++ +
Sbjct: 507 EILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAF--IKHNK--NS 562
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLL 589
Score = 216 (81.1 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 46/116 (39%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ + + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVRE 160
Score = 164 (62.8 bits), Expect = 3.1e-28, Sum P(3) = 3.1e-28
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 396 RSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 120 (47.3 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y ++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 1175 FN 1176
FN
Sbjct: 220 FN 221
Score = 76 (31.8 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y ++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLL 192
Score = 73 (30.8 bits), Expect = 6.8e-76, Sum P(3) = 6.8e-76
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y ++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLK 193
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFVKLRAYNPRTAIECL 377
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 598 (215.6 bits), Expect = 4.0e-76, Sum P(3) = 4.0e-76
Identities = 137/425 (32%), Positives = 234/425 (55%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L+G+ K +L ++K+I+ SAT+N + F +F A
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGG-APD 472
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + R+ E ++L+I + GD+L+FM+G
Sbjct: 473 FTIPGRTFPVDVMF------SRSPVEDYVDQAVQQVLNI----HVSMGTGDILVFMTGQE 522
Query: 437 EIS---SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETS 493
+I +VR + +LP++S + + Q ++F AP G+RKCIV+TNIAETS
Sbjct: 523 DIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETS 582
Query: 494 ITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSE 553
+T+DGI +VVD+G K Y+ M TLQ IS+A+A QR GRAGRTGPG +RL++E
Sbjct: 583 LTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTE 642
Query: 554 EQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHG 612
+ + L + PEI+R ++ + +L + +G+ D+ F F++ PP + + +S+ L G
Sbjct: 643 KAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALG 702
Query: 613 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRD 672
A+D+ +T LGR ++ P+D PL K+++ + + ++++ ++LSV + F R
Sbjct: 703 ALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQ 762
Query: 673 PDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQ 732
+ + AR++ D LT L+ Y +W K S WC R + + ++R Q
Sbjct: 763 EESDAAREKFFVPESDHLTFLHVYSQW----KANGHSDAWCSRHFLHSKSLRRAKEVRDQ 818
Query: 733 FKQVL 737
++
Sbjct: 819 LLDIM 823
Score = 228 (85.3 bits), Expect = 4.0e-76, Sum P(3) = 4.0e-76
Identities = 46/118 (38%), Positives = 75/118 (63%)
Query: 25 FSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-- 82
FS IRE + LP +++++ + +V+I+ G+TG GK+TQ+ Q+L + G+ +
Sbjct: 290 FSQTKSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLG 349
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I CTQPRR+A +S++KRV+ E + VGY IRFE + T I ++T+G+LLR+
Sbjct: 350 MIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRE 407
Score = 174 (66.3 bits), Expect = 2.4e-29, Sum P(3) = 2.4e-29
Identities = 35/116 (30%), Positives = 69/116 (59%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG +RL++E+ + L + PEI+R ++ + +L + +G+ D+ F F++ PP +
Sbjct: 630 RTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQD 689
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ +S+ L GA+D+ +T LGR ++ P+D PL K+++ + + M+ +
Sbjct: 690 TMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITI 745
Score = 115 (45.5 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L+G+ K +L ++K+I+ SAT+N + F +F
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDF 473
Query: 1182 LLSGST 1187
+ G T
Sbjct: 474 TIPGRT 479
Score = 75 (31.5 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 918 DTML--LLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
DTM L DL AL GA+D+ +T LGR ++ P+D PL K+++ + + M+ +
Sbjct: 689 DTMTTSLFDLWAL--GALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITI 745
Score = 75 (31.5 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 968 DTML--LLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
DTM L DL AL GA+D+ +T LGR ++ P+D PL K+++ + + M+ +
Sbjct: 689 DTMTTSLFDLWAL--GALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITI 745
Score = 75 (31.5 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 1018 DTML--LLDL-ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
DTM L DL AL GA+D+ +T LGR ++ P+D PL K+++ + + M+ +
Sbjct: 689 DTMTTSLFDLWAL--GALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITI 745
Score = 71 (30.1 bits), Expect = 4.0e-76, Sum P(3) = 4.0e-76
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y +++DE HER L+ D L+G+ K +L
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKIL 443
Score = 62 (26.9 bits), Expect = 3.5e-75, Sum P(3) = 3.5e-75
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGV 258
L Y +I+DE HER L D L+G+
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGL 438
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 499 (180.7 bits), Expect = 9.6e-76, Sum P(4) = 9.6e-76
Identities = 109/298 (36%), Positives = 178/298 (59%)
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
+VF P G+RK +++TNIAETSITID + +V+D GK+KE +D +ST+ W+SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF 590
+A+QRKGRAGR PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 634
Query: 591 --PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQ 648
++ P E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F
Sbjct: 635 LSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC 694
Query: 649 IDTVLSLAAVLSVQSPFTNRAFRDPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRV 707
+D VL++AA LS + PF ++ + RKEL + D LTV+NA++ W ++
Sbjct: 695 LDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGF 754
Query: 708 RSKK-WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
R +K +C + + ++ QF + L +G ++ P P ++++S E+ ++
Sbjct: 755 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIK 812
Score = 206 (77.6 bits), Expect = 4.2e-43, Sum P(4) = 4.2e-43
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 585 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSD 644
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S++ L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 645 EAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 704
Query: 927 LNF 929
L+F
Sbjct: 705 LSF 707
Score = 193 (73.0 bits), Expect = 9.6e-76, Sum P(4) = 9.6e-76
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 181 DLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD 240
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYSN--LVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 241 DYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS 300
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 301 ILYCTTGIILQ 311
Score = 175 (66.7 bits), Expect = 9.6e-76, Sum P(4) = 9.6e-76
Identities = 42/93 (45%), Positives = 59/93 (63%)
Query: 313 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 372
+D+ LSS +VLDEIHER+L D L+ VIK LL+ ++K+ILMSAT+N E F YF
Sbjct: 315 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGN 374
Query: 373 IAKIIKVPGRLYPIQLEY--HPIVELDRTKSEK 403
+I +PG +P+ +EY I+E R E+
Sbjct: 375 -CPMIHIPGFTFPV-VEYLLEDIIEKIRYVPEQ 405
Score = 152 (58.6 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D+ LSS +VLDEIHER+L D L+ VIK LL+ ++K+ILMSAT+N E F YF
Sbjct: 315 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYFGN 374
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 375 CPMIHIPGFT 384
Score = 104 (41.7 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 655 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 707
Score = 104 (41.7 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 655 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 707
Score = 104 (41.7 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 655 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 707
Score = 88 (36.0 bits), Expect = 1.1e-66, Sum P(4) = 1.1e-66
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 306
+D LSS +VLDEIHER+L D L+ VIK LL+
Sbjct: 315 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 349
Score = 80 (33.2 bits), Expect = 9.6e-76, Sum P(4) = 9.6e-76
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
+R KD S + + K I+K ++ +GLYP+VA N + K + K G V+
Sbjct: 793 SRNPKDPKSNINSDNEK---IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGLVA 848
Query: 1236 LHPFSVFTSQPD 1247
+HP SV Q +
Sbjct: 849 IHPKSVNVEQTE 860
Score = 78 (32.5 bits), Expect = 1.2e-65, Sum P(4) = 1.2e-65
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D+ LSS ++LDE+HER+L D L+ VI L+
Sbjct: 315 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLN 349
Score = 42 (19.8 bits), Expect = 2.6e-46, Sum P(3) = 2.6e-46
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 443 RAAQEYNEKSQGWIVLPLHSTLSLEEQD---RVFHYAPE 478
RA +E+ + IV LHS + ++D ++ +APE
Sbjct: 77 RAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPE 115
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
LPG + IS+ H LL+ + ++ V P ++ +++ ++ T+ +V+
Sbjct: 489 LPGWDNISTLHDLLMSQVMFKSDTIGQVFKKTPPGVRKIVIATNIAETSITIDDVVY 545
Score = 39 (18.8 bits), Expect = 5.0e-16, Sum P(4) = 5.0e-16
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 289 ERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVL 325
E H+ L G + C L + +AA LS D V+
Sbjct: 679 EPHIGKMILFGALFCCLDPVLTIAAS--LSFKDPFVI 713
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 539 (194.8 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 138/447 (30%), Positives = 238/447 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y ++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ I+ V GR +P+ + Y L P P YI+ K
Sbjct: 220 FNQNDTSDPPRDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKSTVETVMK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIVRAAQEYNEKSQGWI-------VLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V E ++ G VLP+++ L EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIE-QARALGRTGMKRHLRVLPMYAGLPSFEQMK 326
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 386
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GRAGR+ G CYRLY+E+ + L + + PE++R ++ ++L L +G+ +V +F
Sbjct: 387 ANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFH 446
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 447 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQ 506
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + + ++ GD LT+LN Y+ + +K ++ +
Sbjct: 507 EILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNK--NS 562
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 563 QWCQEHFLNYKGLVRAATVREQLKKLL 589
Score = 215 (80.7 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 46/116 (39%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ + + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Score = 161 (61.7 bits), Expect = 9.1e-28, Sum P(3) = 9.1e-28
Identities = 33/107 (30%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+E+ + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 396 RSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 502
Score = 121 (47.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y ++LDE HER L+ D +G++K + ++++I+ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 76 (31.8 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y ++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLL 192
Score = 73 (30.8 bits), Expect = 2.3e-75, Sum P(3) = 2.3e-75
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y ++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLK 193
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 356 YVIDCGFVKLRAYNPRTAIECL 377
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 538 (194.4 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 138/447 (30%), Positives = 237/447 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y ++LDE HER L+ D +G++K + ++++++ SAT++ E F +
Sbjct: 152 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDF 211
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ I+ V GR +P+ + Y L P P YI+ K
Sbjct: 212 FNQNETSDPTRDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKSTVETVMK 259
Query: 420 YPRTER-GDVLIFMSGISEISSIVRAAQEYNEKSQGWI-------VLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V E ++ G VLP+++ L EQ +
Sbjct: 260 IHQTEGDGDILAFLTGQEEVETVVSMLIE-QARALGRTGMKRHLRVLPMYAGLPSFEQMK 318
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+AS
Sbjct: 319 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQAS 378
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GRAGR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F
Sbjct: 379 ANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFH 438
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 439 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQ 498
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + ++ GD LT+LN Y+ + +K ++ +
Sbjct: 499 EILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNK--NS 554
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 555 QWCQEHFLNYKGLIRAATVREQLKKLL 581
Score = 216 (81.1 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ V + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 37 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 96
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 97 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 152
Score = 163 (62.4 bits), Expect = 3.8e-28, Sum P(3) = 3.8e-28
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 388 RSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 447
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 448 MVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNF 494
Score = 120 (47.3 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 20/63 (31%), Positives = 40/63 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y ++LDE HER L+ D +G++K + ++++++ SAT++ E F +
Sbjct: 152 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDF 211
Query: 1175 FNR 1177
FN+
Sbjct: 212 FNQ 214
Score = 76 (31.8 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y ++LDE HER LY D +G++
Sbjct: 152 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLL 184
Score = 73 (30.8 bits), Expect = 2.4e-75, Sum P(3) = 2.4e-75
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y ++LDE HER L+ D +G++K
Sbjct: 156 DPLLTKYSAIMLDEAHERTLYTDIAIGLLK 185
Score = 40 (19.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 74 YLVQAGFQRIACTQPRR-IACISLSKRVAYETLSQYSNLVG 113
Y++ GF ++ PR I C+ ++ V+ + +Q + G
Sbjct: 348 YVIDCGFVKLRAYNPRTTIECLVVAP-VSQASANQRAGRAG 387
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 538 (194.4 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 138/447 (30%), Positives = 237/447 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y ++LDE HER L+ D +G++K + ++++++ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDF 219
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP-YIRILSIIDKK 419
FN+ I+ V GR +P+ + Y L P P YI+ K
Sbjct: 220 FNQNETSDPTRDTCVILTVEGRTFPVDIFY-----LQ-------SPVPDYIKSTVETVMK 267
Query: 420 YPRTER-GDVLIFMSGISEISSIVRAAQEYNEKSQGWI-------VLPLHSTLSLEEQDR 471
+TE GD+L F++G E+ ++V E ++ G VLP+++ L EQ +
Sbjct: 268 IHQTEGDGDILAFLTGQEEVETVVSMLIE-QARALGRTGMKRHLRVLPMYAGLPSFEQMK 326
Query: 472 VFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKAS 531
VF +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+AS
Sbjct: 327 VFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQAS 386
Query: 532 AEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP 591
A QR GRAGR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F
Sbjct: 387 ANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFH 446
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQID 650
F+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 447 FMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNFGCSQ 506
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK 710
+LS+AA++ +Q+ F + ++ GD LT+LN Y+ + +K ++ +
Sbjct: 507 EILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF--IKHNK--NS 562
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+WC+ + + +R Q K++L
Sbjct: 563 QWCQEHFLNYKGLIRAATVREQLKKLL 589
Score = 216 (81.1 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IA 84
+ I + + LPV + + I+ V + V+I G+TGCGKSTQIPQYL +AG+ +
Sbjct: 45 LSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVG 104
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTKIVFITEGLLLRQ 139
TQPRR+A ++++ RVA E + + VGY IRF+ T+I F+T+G+L+R+
Sbjct: 105 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Score = 163 (62.4 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 396 RSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 455
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 456 MVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLESGNF 502
Score = 120 (47.3 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 20/63 (31%), Positives = 40/63 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y ++LDE HER L+ D +G++K + ++++++ SAT++ E F +
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDF 219
Query: 1175 FNR 1177
FN+
Sbjct: 220 FNQ 222
Score = 76 (31.8 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y ++LDE HER LY D +G++
Sbjct: 160 EMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLL 192
Score = 73 (30.8 bits), Expect = 2.4e-75, Sum P(3) = 2.4e-75
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y ++LDE HER L+ D +G++K
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLK 193
Score = 40 (19.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 74 YLVQAGFQRIACTQPRR-IACISLSKRVAYETLSQYSNLVG 113
Y++ GF ++ PR I C+ ++ V+ + +Q + G
Sbjct: 356 YVIDCGFVKLRAYNPRTTIECLVVAP-VSQASANQRAGRAG 395
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 490 (177.5 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 112/354 (31%), Positives = 189/354 (53%)
Query: 426 GDVLIFMSGISEISSIVRAAQE-YNEKSQGW----IVLPLHSTLSLEEQDRVFHYAPEGL 480
G +L+F+ G +IS + + K Q W V PLHS + EQ VF P G
Sbjct: 423 GAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQ 482
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK I+ST IAETS+TID + +V++SG+ K +YD+ + +L E W++KA+ +QR+GRAG
Sbjct: 483 RKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAG 542
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 598
R PG+CY L+S + + + TPEI R ++S++LSL + + D +F + AP
Sbjct: 543 RVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNP 602
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E I+ V L + A+D +T LG L+ LP+D +GKM++ ++F +D + S AA
Sbjct: 603 EAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAA 662
Query: 659 LSVQSPFTNRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRG 717
LS +SPF + ++ + ++ + N D L V N + + + +C +
Sbjct: 663 LSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAE-RDFCYKNF 721
Query: 718 IEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRHGEIKLLQAI 771
+ ++ ++++QF ++L + + DA+ + +I LL+AI
Sbjct: 722 LSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSE-----KIPLLRAI 770
Score = 251 (93.4 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 56/138 (40%), Positives = 80/138 (57%)
Query: 10 KLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKST 69
KL R L+ Q++ K E + LP +Y +II V + +V++I G TGCGK+T
Sbjct: 125 KLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTT 184
Query: 70 QIPQYLVQ-------AGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR 122
Q+PQ L+ A RI CTQPRRI+ I++++ V+YE N VGYQIR E +
Sbjct: 185 QVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRK 244
Query: 123 -REKTKIVFITEGLLLRQ 139
RE+ I + T G+LL+Q
Sbjct: 245 ARERASITYCTTGVLLQQ 262
Score = 183 (69.5 bits), Expect = 6.3e-42, Sum P(3) = 6.3e-42
Identities = 41/123 (33%), Positives = 68/123 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG+CY L+S + + + TPEI R ++S++LSL + + D +F + AP
Sbjct: 543 RVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNP 602
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E I+ V L + A+D +T LG L+ LP+D +GKM++ ++F +D + A
Sbjct: 603 EAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAA 662
Query: 927 LNF 929
L+F
Sbjct: 663 LSF 665
Score = 158 (60.7 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
++ +D + + VL+LDEIHER + D L+G++K +L ++K+ILMSAT+ + F Y
Sbjct: 262 QLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDY 321
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSE 402
FN + ++ G ++P+++ Y V L +T E
Sbjct: 322 FNN-CPMFRIEGVMFPVKMLYLEDV-LSKTNYE 352
Score = 139 (54.0 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
Q+ +D + + VL+LDEIHER + D L+G++K +L ++K+ILMSAT+ + F Y
Sbjct: 262 QLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDY 321
Query: 1175 FN 1176
FN
Sbjct: 322 FN 323
Score = 115 (45.5 bits), Expect = 7.4e-35, Sum P(3) = 7.4e-35
Identities = 51/221 (23%), Positives = 96/221 (43%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHH 1082
++L A+D +T LG L+ LP+D +GKM++ ++F +D + AL+F
Sbjct: 609 VELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSF--- 665
Query: 1083 SXXXXXXXAGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHLHGDF 1142
G+ ES +E++ R+ + + + N + +Y D + H DF
Sbjct: 666 -KSPFYSPLGK--ESR-VDEIKRRMARNMRSDHLMVHNTIIAYR----DSRYS-HAERDF 716
Query: 1143 LLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILA 1202
K L S ++ M + EL + Y + + ++ ++ + + +L+ I+
Sbjct: 717 CY---KNFLSSMTLQQLERMKNQFS-ELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIG 772
Query: 1203 SGLYPQVA-IGDEFNTSETVKEALFHCKDKGF-VSLHPFSV 1241
+GLYP +A + V+ D G V+ HP SV
Sbjct: 773 AGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSV 813
Score = 83 (34.3 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
++L A+D +T LG L+ LP+D +GKM++ ++F +D + AL+F
Sbjct: 609 VELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSF 665
Score = 83 (34.3 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
++L A+D +T LG L+ LP+D +GKM++ ++F +D + AL+F
Sbjct: 609 VELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSF 665
Score = 82 (33.9 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D + + VL+LDEIHER + D L+G++K +L
Sbjct: 265 SDPLMHNLSVLILDEIHERSVETDLLMGLLKVIL 298
Score = 75 (31.5 bits), Expect = 8.0e-67, Sum P(3) = 8.0e-67
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q+ +D + + +LILDE+HER + D L+G++
Sbjct: 262 QLQSDPLMHNLSVLILDEIHERSVETDLLMGLL 294
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 570 (205.7 bits), Expect = 3.2e-75, Sum P(3) = 3.2e-75
Identities = 135/434 (31%), Positives = 235/434 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ + L Y L++DE HER + D G++K + + ++K+++ SAT++ + F +Y
Sbjct: 586 ELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSY 645
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F+ A I +PGR+Y + + Y + ++ L + I + P GD+L
Sbjct: 646 FDN-APIFNIPGRMYNVDIHY-----TQQPEANYL-AAAITTVFQIHVSQGP----GDIL 694
Query: 430 IFMSGISEIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI S+ A++ K I+ P+++ L + Q ++F P RK ++
Sbjct: 695 VFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVL 754
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
+TNIAETS+TIDGI +V+D G VKE ++ M +L S+ASA QR GRAGR GPG
Sbjct: 755 ATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPG 814
Query: 546 VCYRLYSE-EQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESS 604
C+RLY++ Y+ L E +TPEI+R ++ S++L L +G+ + +F F++ PPAE I +
Sbjct: 815 KCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRA 874
Query: 605 VRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSP 664
+ L GA++ + +T +GR +++ P D L K ++ ++ VLS+ ++L S
Sbjct: 875 LEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASA 934
Query: 665 -FTNRAFRDPDCETARKELE-SNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
F + ++AR + GD LT+LN + +W+ D S W K ++++
Sbjct: 935 LFFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWV----DSDFSYVWAKENFLQQRS 990
Query: 723 FYEVTKLRSQFKQV 736
+R Q ++
Sbjct: 991 LTRARDVRDQLAKL 1004
Score = 268 (99.4 bits), Expect = 3.2e-75, Sum P(3) = 3.2e-75
Identities = 56/132 (42%), Positives = 89/132 (67%)
Query: 12 LLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQI 71
+L+ LD + ++K T I +T+ LP+ Q++ +II V +V+II G+TG GK+TQ+
Sbjct: 459 MLQEKLD-QAEQKAQT---IEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQL 514
Query: 72 PQYLVQAGF----QRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTK 127
PQYL +AG+ ++ CTQPRR+A +S++ RVA E + N VGY IRFE + +KT
Sbjct: 515 PQYLHEAGYTKNGMKVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTV 574
Query: 128 IVFITEGLLLRQ 139
+ ++T+G+LLR+
Sbjct: 575 LKYMTDGMLLRE 586
Score = 192 (72.6 bits), Expect = 4.7e-34, Sum P(3) = 4.7e-34
Identities = 37/102 (36%), Positives = 65/102 (63%)
Query: 809 RTGPGVCYRLYSE-EQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R GPG C+RLY++ Y+ L E +TPEI+R ++ S++L L +G+ + +F F++ PPAE
Sbjct: 810 RVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAE 869
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
I ++ L GA++ + +T +GR +++ P D L K ++
Sbjct: 870 TIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAIL 911
Score = 103 (41.3 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L Y L++DE HER + D G++K + + ++K+++ SAT++ + F +YF+
Sbjct: 593 LGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFD 647
Score = 59 (25.8 bits), Expect = 3.2e-75, Sum P(3) = 3.2e-75
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y L++DE HER + D G++K
Sbjct: 593 LGQYSALMIDEAHERTVPTDIACGLLK 619
Score = 57 (25.1 bits), Expect = 5.3e-75, Sum P(3) = 5.3e-75
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ T+ L Y L++DE HER + D G++
Sbjct: 586 ELLTEPDLGQYSALMIDEAHERTVPTDIACGLL 618
Score = 57 (25.1 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 33/106 (31%), Positives = 44/106 (41%)
Query: 663 SPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
SP + + D D E RKE E L +A + L K D+ RSKK I E R
Sbjct: 218 SPRSRASSADLDPEE-RKERERKRD--LEERDALAKRLASKDDK-RSKK------IVEDR 267
Query: 723 FYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRHGEIKLL 768
+ R ++ L D D PD L SR+ L+ E + L
Sbjct: 268 TKDSEAAR---RRALADDAKARDAAMPDLRLRSRQEYLKKRETERL 310
Score = 53 (23.7 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
GA++ + +T +GR +++ P D L K ++
Sbjct: 882 GALNDRGELTKIGRQMAEFPTDPMLAKAIL 911
Score = 53 (23.7 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
GA++ + +T +GR +++ P D L K ++
Sbjct: 882 GALNDRGELTKIGRQMAEFPTDPMLAKAIL 911
Score = 53 (23.7 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA++ + +T +GR +++ P D L K ++
Sbjct: 882 GALNDRGELTKIGRQMAEFPTDPMLAKAIL 911
Score = 37 (18.1 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 1250 RISEDDIVDPPP 1261
++ E D +DPPP
Sbjct: 856 QLLEFDFMDPPP 867
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 564 (203.6 bits), Expect = 5.8e-75, Sum P(3) = 5.8e-75
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 217 (81.4 bits), Expect = 5.8e-75, Sum P(3) = 5.8e-75
Identities = 44/112 (39%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + +++II V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 164 (62.8 bits), Expect = 6.4e-28, Sum P(3) = 6.4e-28
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 74 (31.1 bits), Expect = 5.8e-75, Sum P(3) = 5.8e-75
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 68 (29.0 bits), Expect = 2.5e-74, Sum P(3) = 2.5e-74
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 606 (218.4 bits), Expect = 6.0e-75, Sum P(4) = 6.0e-75
Identities = 149/440 (33%), Positives = 243/440 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D +S Y V++LDE HER + D L ++K E+K+I+ SAT+N F Y
Sbjct: 587 EALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEY 646
Query: 370 FNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVL 429
F II +PG+ +P+++ Y ++D ++ LD ++ I + P GD+L
Sbjct: 647 FLN-CPIINIPGKTFPVEVLYSQTPQMDYIEAA-LDC-----VIDIHINEGP----GDIL 695
Query: 430 IFMSGISEISSIVRAAQEYNEKSQG-----WIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
+F++G EI S + K+ G ++LP++S L E Q ++F P+G RK +
Sbjct: 696 VFLTGQEEIDSCCEILYD-RVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVV 754
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
+TNIAETSITIDGI +VVD G K Y+ A + L IS+A A QRKGRAGRTGP
Sbjct: 755 FATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGP 814
Query: 545 GVCYRLYSEEQ-YSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIES 603
G CYRLY+E Y+ + E + PEI+R ++ +L L MG+ D+ KF F++ PP + +
Sbjct: 815 GKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLN 874
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQI-DTVLSLAAVLSVQ 662
++ L ++D + ++T+LG+ +S P+D L + L+ S+ +Q D ++++ ++LSVQ
Sbjct: 875 ALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLL-SSVDNQCSDEIVTIISMLSVQ 933
Query: 663 SPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
+ F R + ++ + + +GD LT+LN Y W + S+++CK + +
Sbjct: 934 NVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRW----QQANYSEQYCKTNFLHFRH 989
Query: 723 FYEVTKLRSQFKQVLGDSGL 742
++SQ + GL
Sbjct: 990 LKRARDVKSQISMIFKKIGL 1009
Score = 229 (85.7 bits), Expect = 6.0e-75, Sum P(4) = 6.0e-75
Identities = 49/116 (42%), Positives = 72/116 (62%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---I 83
T + I + +LPV + E+I V + ++I G+TG GK+TQI QYL + GF I
Sbjct: 472 TSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMI 531
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A +S++KRVA E + + VGY IRFE T+I ++T+G+L R+
Sbjct: 532 GCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQRE 587
Score = 184 (69.8 bits), Expect = 1.8e-28, Sum P(4) = 1.8e-28
Identities = 37/102 (36%), Positives = 63/102 (61%)
Query: 809 RTGPGVCYRLYSEEQ-YSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLY+E Y+ + E + PEI+R ++ +L L MG+ D+ KF F++ PP
Sbjct: 811 RTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKN 870
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L ++D + ++T LG+ +S P+D L + L+
Sbjct: 871 LMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLL 912
Score = 64 (27.6 bits), Expect = 6.0e-75, Sum P(4) = 6.0e-75
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
+S Y V++LDE HER + D L ++K
Sbjct: 594 MSKYSVIMLDEAHERTVATDVLFALLK 620
Score = 62 (26.9 bits), Expect = 9.8e-75, Sum P(4) = 9.8e-75
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 225 QVQVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
Q + D +S Y +++LDE HER + D L ++
Sbjct: 585 QREALLDPEMSKYSVIMLDEAHERTVATDVLFALL 619
Score = 48 (22.0 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
++D + ++T+LG+ +S P+D L + L+
Sbjct: 884 SLDDEGKLTNLGKEMSLFPMDPTLSRSLL 912
Score = 48 (22.0 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
++D + ++T+LG+ +S P+D L + L+
Sbjct: 884 SLDDEGKLTNLGKEMSLFPMDPTLSRSLL 912
Score = 48 (22.0 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
++D + ++T+LG+ +S P+D L + L+
Sbjct: 884 SLDDEGKLTNLGKEMSLFPMDPTLSRSLL 912
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/82 (23%), Positives = 39/82 (47%)
Query: 336 DFLLGVI-KCLLHSTAEVKIILMSATINIE-LFHTYFNRIAKIIK-----VPGRLYPIQL 388
+F+L ++ K + + ++ LM + ++ E +F Y ++K +P P ++
Sbjct: 98 EFVLSILNKSKSITEFQEQLNLMQSGLDNETIFKIYQIASPPVMKEEVSVLPSTKIPAKI 157
Query: 389 EYHPIVELDRTKSEKLDPGPYI 410
E +E + K E LDP P +
Sbjct: 158 EAK--IEEEVQKIESLDPSPVL 177
Score = 37 (18.1 bits), Expect = 6.0e-75, Sum P(4) = 6.0e-75
Identities = 5/26 (19%), Positives = 17/26 (65%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFL 1291
P ++ +++ ++Y S++ TS+ ++
Sbjct: 1055 PSSSLYGKEYEYVMYHSIVLTSREYM 1080
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 564 (203.6 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 215 (80.7 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 164 (62.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 74 (31.1 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 68 (29.0 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 564 (203.6 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 215 (80.7 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 164 (62.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 74 (31.1 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 68 (29.0 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 564 (203.6 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQKHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 215 (80.7 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 164 (62.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 74 (31.1 bits), Expect = 9.4e-75, Sum P(3) = 9.4e-75
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 68 (29.0 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 161 DPNLNKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 648 (233.2 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 154/467 (32%), Positives = 262/467 (56%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV-----KIILMSATINIE 364
E +D+ L Y ++LDE HER +H D L GV+K E+ K+I+MSAT++++
Sbjct: 88 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVD 147
Query: 365 LFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI--IDKKYPR 422
LF YFN A ++ + GR +PIQ+ Y TK + D + ++S+ I ++ P
Sbjct: 148 LFSQYFNG-APVLYLEGRQHPIQVFY--------TKQPQNDY-LHAALVSVFQIHQEAPS 197
Query: 423 TERGDVLIFMSGISEISSIVRA----AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
++ D+L+F++G EI ++ + A+ + +VLPL+++L +Q RVF AP+
Sbjct: 198 SQ--DILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPK 255
Query: 479 GLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
G RK I+STNIAETSITI GI++VVD+G VK Y+ + + L +SK A QR GR
Sbjct: 256 GYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGR 315
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P
Sbjct: 316 AGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSP 375
Query: 599 ENIESSVRSLTQHGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
++I++++ L GA++ K+ +T +GR ++ P++ K ++ FH + +L++
Sbjct: 376 DHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTI 435
Query: 656 AAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKR 715
++LSV S N R + + RK+ S+ GD +T+LN Y+ + K+ +K WCK
Sbjct: 436 VSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTF----KNLGGNKDWCKE 491
Query: 716 RGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALRH 762
+ + V ++R+Q + + + I + S R L H
Sbjct: 492 NFVNSKNMTLVAEVRAQLRDICLKMSM--PIASSRGDVESVRRCLAH 536
Score = 174 (66.3 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 34/127 (26%), Positives = 73/127 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+CYRLY+E+++ + + PEI+R ++ S++L L+ M + +V F F+ P ++
Sbjct: 318 REDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDH 377
Query: 869 IESSVRSLTQHGAIDSKE---RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
I++++ L GA++ K+ +T +GR ++ P++ K ++ FH + +L +
Sbjct: 378 IQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVS 437
Query: 926 ALNFGAI 932
L+ ++
Sbjct: 438 LLSVDSV 444
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 1094 RLESMDANEVEFRLKHDPKQVQVA-ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLH 1152
R + + + + + D ++ A +D+ L Y ++LDE HER +H D L GV+K
Sbjct: 66 RFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQK 125
Query: 1153 STAEV-----KIILMSATINIELFHTYFN 1176
E+ K+I+MSAT++++LF YFN
Sbjct: 126 RRKELGKLPLKVIVMSATMDVDLFSQYFN 154
Score = 86 (35.3 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 103 ETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
ET + S+ VGY +RF+ E T+I F+T+G+LLR+
Sbjct: 52 ETWTTRSSSVGYTVRFDDVTSEDTRIKFLTDGMLLRE 88
Score = 83 (34.3 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
+D L Y ++LDE HER +H D L GV+K
Sbjct: 91 SDSLLRKYSCVILDEAHERTIHTDVLFGVVK 121
Score = 78 (32.5 bits), Expect = 3.9e-74, Sum P(3) = 3.9e-74
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ +D+ L Y +ILDE HER ++ D L GV+
Sbjct: 88 EAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Score = 52 (23.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 923 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L+
Sbjct: 385 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 441
Query: 980 GAI 982
++
Sbjct: 442 DSV 444
Score = 52 (23.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 973 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L+
Sbjct: 385 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 441
Query: 1030 GAI 1032
++
Sbjct: 442 DSV 444
Score = 52 (23.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 1023 LDLALNFGAIDSKE---RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLD--LAL 1077
LDL GA++ K+ +T +GR ++ P++ K ++ FH + +L + L++
Sbjct: 385 LDL---LGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSV 441
Query: 1078 NFVHHS 1083
+ V H+
Sbjct: 442 DSVLHN 447
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 564 (203.6 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 153 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 209
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 210 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 262
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 263 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 322
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 323 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 382
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 383 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 442
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 443 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 557
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 558 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 607
Score = 215 (80.7 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 49 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 108
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 109 VAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 160
Score = 164 (62.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 399 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 458
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 459 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 491
Score = 74 (31.1 bits), Expect = 1.4e-74, Sum P(3) = 1.4e-74
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 158 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 192
Score = 68 (29.0 bits), Expect = 6.0e-74, Sum P(3) = 6.0e-74
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 161 DPNLTKFSVIILDEAHERTLTTDILFGLL 189
Score = 40 (19.1 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 238 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 274
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 523 (189.2 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 119/347 (34%), Positives = 198/347 (57%)
Query: 422 RTER-GDVLIFMSGISEISSI---VRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAP 477
R ER G VL+F++G +I S+ ++A + ++ ++L H +++ EQ +F AP
Sbjct: 535 RKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRV-LLLMCHGSMATAEQRLIFERAP 593
Query: 478 EGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKG 537
+RK +++TN+AE SITI+ + FVVD GK KE +YD L WIS+ASA QR+G
Sbjct: 594 PNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRG 653
Query: 538 RAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEA 595
RAGR PG CY LY + Y AEY PE+ R ++SL L + + + + +F L+A
Sbjct: 654 RAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQA 713
Query: 596 PPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
P + +++++ L GA+D KE +T LG+ LS LPVD LGKML+ G++F D +L++
Sbjct: 714 PESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Query: 656 AAVLSVQSPFTNRAFRDPDCETARKELES-NHGDPLTVLNAYKEWLGVKKDRVRSKKWCK 714
+ LSV+ PF + +A+ + ++ D + ++ A++ W +++ + ++C
Sbjct: 774 VSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREG-SAYEFCW 832
Query: 715 RRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERALR 761
R + Q + LR QF +L ++GL+ D + LS + +R
Sbjct: 833 RNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVR 879
Score = 226 (84.6 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 44/120 (36%), Positives = 80/120 (66%)
Query: 27 TLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYL----VQAG--- 79
T+++ R+T LP + K+ ++ + + +V++++G+TGCGK+TQ+PQY+ +++G
Sbjct: 252 TMLEFRKT---LPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGA 308
Query: 80 FQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
F I CTQPRRI+ +++S+RV+ E VG+++R E R + T ++F T G+LLR+
Sbjct: 309 FCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRR 368
Score = 211 (79.3 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 45/117 (38%), Positives = 69/117 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY + Y AEY PE+ R ++SL L + + + + +F L+AP +
Sbjct: 657 RLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPES 716
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+++++ L GA+D KE +T LG+ LS LPVD LGKML+ G++F D +L +
Sbjct: 717 LAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Score = 146 (56.5 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 31/85 (36%), Positives = 54/85 (63%)
Query: 313 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 372
+D L+ + +DEIHER ++ DFL+ V+K LL +++++LMSAT+N ELF Y+
Sbjct: 371 SDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGG 430
Query: 373 IAKIIKVPGRLYPIQLEY-HPIVEL 396
A I +PG +P++ + ++E+
Sbjct: 431 -APTIHIPGFTHPVKAHFLEDVLEI 454
Score = 125 (49.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ +D L+ + +DEIHER ++ DFL+ V+K LL +++++LMSAT+N ELF Y
Sbjct: 368 RLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNY 427
Query: 1175 F 1175
+
Sbjct: 428 Y 428
Score = 117 (46.2 bits), Expect = 6.7e-32, Sum P(4) = 6.7e-32
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
GA+D KE +T LG+ LS LPVD LGKML+ G++F D +L +
Sbjct: 730 GALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Score = 117 (46.2 bits), Expect = 6.7e-32, Sum P(4) = 6.7e-32
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
GA+D KE +T LG+ LS LPVD LGKML+ G++F D +L +
Sbjct: 730 GALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Score = 117 (46.2 bits), Expect = 6.7e-32, Sum P(4) = 6.7e-32
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA+D KE +T LG+ LS LPVD LGKML+ G++F D +L +
Sbjct: 730 GALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773
Score = 64 (27.6 bits), Expect = 5.8e-66, Sum P(3) = 5.8e-66
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D L+ + +DEIHER ++ DFL+ V+K LL
Sbjct: 371 SDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELL 404
Score = 59 (25.8 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 1161 LMSATIN-IELFHTYFNRIAKD--LLSGSTARSHK---DVTILKVILASGLYPQVAIGDE 1214
L + T+ I FN I K+ L+ A ++K + ++++ ++ SGL+P +A
Sbjct: 836 LSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVRAVICSGLFPGIASVVH 895
Query: 1215 FNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDV 1248
TS + F D G VSL+ SV + P +
Sbjct: 896 RETSMS-----FKTMDDGQVSLYANSVNSRFPTI 924
Score = 55 (24.4 bits), Expect = 5.1e-65, Sum P(3) = 5.1e-65
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ +D L+ + +DE+HER + DFL+ V+
Sbjct: 368 RLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVL 400
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 447 (162.4 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 98/282 (34%), Positives = 165/282 (58%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
+ P++S LS E+Q ++F LRK IVSTNIAETS+T+DGI++V+D+G K Y+ T
Sbjct: 774 IFPIYSQLSSEQQSKIFK--KYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSL 575
M LQ IS+A+A QR GRAGRTG G+CYRLY+E + L + + PEI+R ++ ++
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 576 LLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIP 635
+L L + + ++ +F F++ P E+I +S+ L GAI+++ +T +GR + P+D P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 636 LGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNA 695
L K++++ F +L + ++LS S F + E+ +++ D LT+LN
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 696 YKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
Y +W + S WC + I+ + + ++ SQ ++
Sbjct: 1012 YLQW----RSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDII 1049
Score = 276 (102.2 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 57/123 (46%), Positives = 84/123 (68%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
K KE+ L+K++E SLP+ + K E++D V ++II G+TG GK+TQI QYL + G
Sbjct: 467 KDKEE---LLKLKE---SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEG 520
Query: 80 FQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
+ R I CTQPRR+A +S++ RV+YE +LVGY IRFE + + TKI ++T+G+L
Sbjct: 521 YHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGIL 580
Query: 137 LRQ 139
LR+
Sbjct: 581 LRE 583
Score = 191 (72.3 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 43/136 (31%), Positives = 82/136 (60%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTG G+CYRLY+E + L + + PEI+R ++ +++L L + + ++ +F F++ P E
Sbjct: 856 RTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKE 915
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+I +S+ L GAI+++ +T +GR + P+D PL K++++ F +L++ L
Sbjct: 916 SIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSML 975
Query: 928 NFGAI--DSKERVTSL 941
+ +I +SKE S+
Sbjct: 976 SSPSIFLESKENNESI 991
Score = 167 (63.8 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 43/133 (32%), Positives = 71/133 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V+++DE HER ++ D LLG++K + ++K+I+ SATI+ + F +
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAF 642
Query: 370 FNRIAKIIKVPGRLYPIQLEY--HPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGD 427
F A I + GR + + +EY P + +K I+I + D Y GD
Sbjct: 643 FGN-APIYNIQGRTFKVHIEYLRTPCNDYIECAVQKA-----IQI-HVSDNNYDNNF-GD 694
Query: 428 VLIFMSGISEISS 440
+LIFM+G +I++
Sbjct: 695 ILIFMTGQEDINA 707
Score = 125 (49.1 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V+++DE HER ++ D LLG++K + ++K+I+ SATI+ + F +F
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 1179 AKDLLSGSTARSH 1191
+ G T + H
Sbjct: 647 PIYNIQGRTFKVH 659
Score = 83 (34.3 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK--CLLHSTVEV 311
D L Y V+++DE HER ++ D LLG++K CL + +++
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKL 627
Score = 80 (33.2 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DSKER 987
GAI+++ +T +GR + P+D PL K++++ F +L++ L+ +I +SKE
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKEN 987
Query: 988 VTSL 991
S+
Sbjct: 988 NESI 991
Score = 80 (33.2 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DSKER 1037
GAI+++ +T +GR + P+D PL K++++ F +L++ L+ +I +SKE
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKEN 987
Query: 1038 VTSL 1041
S+
Sbjct: 988 NESI 991
Score = 76 (31.8 bits), Expect = 4.6e-64, Sum P(3) = 4.6e-64
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++I+DE HER + D LLG++
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGIL 615
Score = 73 (30.8 bits), Expect = 9.7e-34, Sum P(3) = 9.7e-34
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GAI+++ +T +GR + P+D PL K++++ F +L++
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILII 971
Score = 49 (22.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 349 TAEVKIILMSATIN---IELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLD 405
T E+K I+++ T+N I+ F +Y R I Q + ++ KS+ ++
Sbjct: 286 TNEIKKIVLTRTVNPPFIDKFKSYNKRFVNIE---------QRNNFDDQKSEKKKSDNIN 336
Query: 406 PGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQ 453
Y I Y + + F+ + S ++ + NEKS+
Sbjct: 337 NDKYYSNKPIQSTSYSTVVKDETCDFVKAAKKGSEFLKYFKSENEKSK 384
Score = 37 (18.1 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 11 LLLRTYLDFKQKEKFSTLMKIRETQNSL 38
+LLR L+ K+ +K+S ++ + S+
Sbjct: 579 ILLRETLNDKELDKYSVIIMDEAHERSI 606
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 447 (162.4 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 98/282 (34%), Positives = 165/282 (58%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
+ P++S LS E+Q ++F LRK IVSTNIAETS+T+DGI++V+D+G K Y+ T
Sbjct: 774 IFPIYSQLSSEQQSKIFK--KYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSL 575
M LQ IS+A+A QR GRAGRTG G+CYRLY+E + L + + PEI+R ++ ++
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 576 LLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIP 635
+L L + + ++ +F F++ P E+I +S+ L GAI+++ +T +GR + P+D P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 636 LGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNA 695
L K++++ F +L + ++LS S F + E+ +++ D LT+LN
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 696 YKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
Y +W + S WC + I+ + + ++ SQ ++
Sbjct: 1012 YLQW----RSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDII 1049
Score = 276 (102.2 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 57/123 (46%), Positives = 84/123 (68%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
K KE+ L+K++E SLP+ + K E++D V ++II G+TG GK+TQI QYL + G
Sbjct: 467 KDKEE---LLKLKE---SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEG 520
Query: 80 FQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
+ R I CTQPRR+A +S++ RV+YE +LVGY IRFE + + TKI ++T+G+L
Sbjct: 521 YHRNGIICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGIL 580
Query: 137 LRQ 139
LR+
Sbjct: 581 LRE 583
Score = 191 (72.3 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 43/136 (31%), Positives = 82/136 (60%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTG G+CYRLY+E + L + + PEI+R ++ +++L L + + ++ +F F++ P E
Sbjct: 856 RTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLLKSLHVQNLFEFDFIDVPSKE 915
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+I +S+ L GAI+++ +T +GR + P+D PL K++++ F +L++ L
Sbjct: 916 SIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSML 975
Query: 928 NFGAI--DSKERVTSL 941
+ +I +SKE S+
Sbjct: 976 SSPSIFLESKENNESI 991
Score = 167 (63.8 bits), Expect = 1.3e-73, Sum P(3) = 1.3e-73
Identities = 43/133 (32%), Positives = 71/133 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D L Y V+++DE HER ++ D LLG++K + ++K+I+ SATI+ + F +
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAF 642
Query: 370 FNRIAKIIKVPGRLYPIQLEY--HPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGD 427
F A I + GR + + +EY P + +K I+I + D Y GD
Sbjct: 643 FGN-APIYNIQGRTFKVHIEYLRTPCNDYIECAVQKA-----IQI-HVSDNNYDNNF-GD 694
Query: 428 VLIFMSGISEISS 440
+LIFM+G +I++
Sbjct: 695 ILIFMTGQEDINA 707
Score = 125 (49.1 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L Y V+++DE HER ++ D LLG++K + ++K+I+ SATI+ + F +F
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 1179 AKDLLSGSTARSH 1191
+ G T + H
Sbjct: 647 PIYNIQGRTFKVH 659
Score = 83 (34.3 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK--CLLHSTVEV 311
D L Y V+++DE HER ++ D LLG++K CL + +++
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKL 627
Score = 80 (33.2 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DSKER 987
GAI+++ +T +GR + P+D PL K++++ F +L++ L+ +I +SKE
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKEN 987
Query: 988 VTSL 991
S+
Sbjct: 988 NESI 991
Score = 80 (33.2 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI--DSKER 1037
GAI+++ +T +GR + P+D PL K++++ F +L++ L+ +I +SKE
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKEN 987
Query: 1038 VTSL 1041
S+
Sbjct: 988 NESI 991
Score = 76 (31.8 bits), Expect = 4.6e-64, Sum P(3) = 4.6e-64
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+ D L Y ++I+DE HER + D LLG++
Sbjct: 583 ETLNDKELDKYSVIIMDEAHERSINTDVLLGIL 615
Score = 73 (30.8 bits), Expect = 9.7e-34, Sum P(3) = 9.7e-34
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GAI+++ +T +GR + P+D PL K++++ F +L++
Sbjct: 928 GAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQNFQCTKEILII 971
Score = 49 (22.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 349 TAEVKIILMSATIN---IELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLD 405
T E+K I+++ T+N I+ F +Y R I Q + ++ KS+ ++
Sbjct: 286 TNEIKKIVLTRTVNPPFIDKFKSYNKRFVNIE---------QRNNFDDQKSEKKKSDNIN 336
Query: 406 PGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQ 453
Y I Y + + F+ + S ++ + NEKS+
Sbjct: 337 NDKYYSNKPIQSTSYSTVVKDETCDFVKAAKKGSEFLKYFKSENEKSK 384
Score = 37 (18.1 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 11 LLLRTYLDFKQKEKFSTLMKIRETQNSL 38
+LLR L+ K+ +K+S ++ + S+
Sbjct: 579 ILLRETLNDKELDKYSVIIMDEAHERSI 606
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 549 (198.3 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 121/341 (35%), Positives = 201/341 (58%)
Query: 428 VLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
+L+F+ G++EI + GWI+ LHS+++ +EQ++ F P+G+RK +++T
Sbjct: 922 ILVFLPGMAEIRRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVIAT 981
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAET ITI I V+D+GK K M +D ++S L E +IS+A+A+QR+GRAGR G+C
Sbjct: 982 NIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGIC 1041
Query: 548 YRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA--PPA-ENIES 603
+ ++++ ++ +LLAE TPE+ R+S+ L+L + LG+V LEA PP+ +NI
Sbjct: 1042 FHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEP-TLLEALDPPSSKNIRR 1100
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
++ +L + A+ S E +T LG+ L+ LP+D+ LGK+++ G+ F +D +S+AA+LS +S
Sbjct: 1101 AIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKS 1160
Query: 664 PFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQR 722
PF N + E R D LTV NAY W + ++ +C++ + Q
Sbjct: 1161 PFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQT 1220
Query: 723 FYEVTKLRSQFKQVLGDSGLITDIPGPDASLS-SRERALRH 762
+ ++ Q + D+GL+T ASL+ +R RH
Sbjct: 1221 LLNIEDVKLQLMVSIADAGLVTLDTNQKASLNRARSTRQRH 1261
Score = 184 (69.8 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 47/130 (36%), Positives = 78/130 (60%)
Query: 23 EKFST--LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ--- 77
EK ST + +++ LP+ +K EI++T+ R +II +TG GKSTQIP ++++
Sbjct: 628 EKASTPAFQYMVQSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEM 687
Query: 78 -AGFQ-RIACTQPRRIACISLSKRVAYETLSQYSN-------LVGYQIRFEKHRREKTKI 128
+G +I T+PRRI+ ISL++RV+ E L + N L+G+ +R E T++
Sbjct: 688 LSGRPCKIYVTEPRRISAISLARRVS-EELGESKNDVGTSRSLIGFAVRLESKVSPATRL 746
Query: 129 VFITEGLLLR 138
VF T G+++R
Sbjct: 747 VFATTGVVVR 756
Score = 184 (69.8 bits), Expect = 7.1e-34, Sum P(3) = 7.1e-34
Identities = 42/124 (33%), Positives = 77/124 (62%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA--PP 865
R G+C+ ++++ ++ +LLAE TPE+ R+S+ L+L + LG+V LEA PP
Sbjct: 1035 RVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEP-TLLEALDPP 1093
Query: 866 A-ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLD 924
+ +NI ++ +L + A+ S E +T LG+ L+ LP+D+ LGK+++ G+ F +D + +
Sbjct: 1094 SSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIA 1153
Query: 925 LALN 928
L+
Sbjct: 1154 AILS 1157
Score = 156 (60.0 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 29/80 (36%), Positives = 53/80 (66%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+VLDE+HER + DFLL V++ L+ ++K+ILMSAT++ F TY + ++ +PGR
Sbjct: 770 VVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVP-VLNIPGR 828
Query: 383 LYPIQLEY-HPIVELDRTKS 401
+P++ ++ +EL + ++
Sbjct: 829 TFPVETKFLEDAIELTQYRT 848
Score = 122 (48.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGST 1187
+VLDE+HER + DFLL V++ L+ ++K+ILMSAT++ F TY + + G T
Sbjct: 770 VVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRT 829
Score = 88 (36.0 bits), Expect = 6.1e-24, Sum P(3) = 6.1e-24
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
+D A+ S E +T LG+ L+ LP+D+ LGK+++ G+ F +D + + L+
Sbjct: 1102 IDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILS 1157
Score = 88 (36.0 bits), Expect = 6.1e-24, Sum P(3) = 6.1e-24
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
+D A+ S E +T LG+ L+ LP+D+ LGK+++ G+ F +D + + L+
Sbjct: 1102 IDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILS 1157
Score = 88 (36.0 bits), Expect = 6.1e-24, Sum P(3) = 6.1e-24
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+D A+ S E +T LG+ L+ LP+D+ LGK+++ G+ F +D + + L+
Sbjct: 1102 IDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILS 1157
Score = 68 (29.0 bits), Expect = 3.1e-64, Sum P(3) = 3.1e-64
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLL 305
+VLDE+HER + DFLL V++ L+
Sbjct: 770 VVLDEVHERSIDSDFLLIVLRRLM 793
Score = 61 (26.5 bits), Expect = 1.7e-63, Sum P(3) = 1.7e-63
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
++LDEVHER + DFLL V+
Sbjct: 770 VVLDEVHERSIDSDFLLIVL 789
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 459 PLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMS 512
P H+ S ++ + +Y PE L + + AE I ++ S V++ S
Sbjct: 56 PTHTAPSSDKTPSLQNYTPEELERHLED---AELQILVEKYAAKCKSDAVRQAS 106
Score = 38 (18.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 690 LTVLNAYKEWLGVKKDRVRSKKWCKRR---GIEEQRFYEVTKLRSQFKQVLGDSGLITDI 746
L L +Y + G +KD ++ W R G +F +K++ K V+ ++ IT
Sbjct: 223 LDELPSYTQTNGQRKDADKNVSWISDRETSGKSAPKFAAGSKMQKA-KPVVREN--ITQ- 278
Query: 747 PGPDASLSS 755
P P S SS
Sbjct: 279 PDPYDSDSS 287
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 555 (200.4 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 153/462 (33%), Positives = 255/462 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS--TAEVKIILMSATINIELFH 367
E+ D+ L+ Y ++LDE HER + D ++G +K ++ S ++KI++MSAT+N ELF
Sbjct: 283 EIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFS 342
Query: 368 TYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGD 427
+F A I+ + G++YP+ Y LD + +D IR + I+ P GD
Sbjct: 343 NFFGN-APILYIEGKMYPVSQFY-----LDAESEDIVDT--MIRSIIQINLNEPE---GD 391
Query: 428 VLIFMSGISEISSIVRAAQEYNE---KSQGWIV-LPLHSTLSLEEQDRVFHYAPEGLRKC 483
VL F+ G EI + V++ ++ + IV LPL++ LS +Q ++F P+G RK
Sbjct: 392 VLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKV 451
Query: 484 IVSTNIAETSITIDGIRFVVDSG--KVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGR 541
I++TNIAETSIT+ G+++V+DSG K+K +++ +STL IS+ASA QR GRAGR
Sbjct: 452 ILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLG--LSTLLTTPISQASARQRAGRAGR 509
Query: 542 TGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENI 601
G +RLY E Y L + EI+R I +L+L +G+ D+ + +LE P + I
Sbjct: 510 ESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAI 569
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
S++ +L GA++ +VT+LG +S LP+ L +L+ + F + V+ +A+ LSV
Sbjct: 570 LSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSV 629
Query: 662 QSPFTNRA--FRDPDCETARKE---LESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRR 716
+ TN RD + R++ L + HGD + + ++ + + + K+WCK
Sbjct: 630 DNLITNVTGEARD-EINFKRRQHCPLGNIHGDLIALYEYFQAY------QAQGKEWCKEL 682
Query: 717 GIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRER 758
+ F V K++ Q ++ + +T I D SL++ E+
Sbjct: 683 AFSFKGFKNVEKIKYQLQEYM-----MTTIKQDD-SLTNAEK 718
Score = 233 (87.1 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 51/119 (42%), Positives = 76/119 (63%)
Query: 28 LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQ 87
L++IRE LP+ +K +II+ + +V I+ G+TG GKSTQIPQ+L+ + I TQ
Sbjct: 175 LLQIRE---KLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPENPKMIGVTQ 231
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ---DSGL 143
PRR+A SL+ RV+ E + VGYQ+RF +TK+ ++T+G+LLR+ DS L
Sbjct: 232 PRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNL 290
Score = 135 (52.6 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 37/118 (31%), Positives = 63/118 (53%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G +RLY E Y L + EI+R I +L+L +G+ D+ + +LE P +
Sbjct: 509 RESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDA 568
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
I S++ +L GA++ +VTTLG +S LP+ L +L+ + F + ++ D+A
Sbjct: 569 ILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVI--DIA 624
Score = 127 (49.8 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS--TAEVKIILMSATINIELFH 1172
++ D+ L+ Y ++LDE HER + D ++G +K ++ S ++KI++MSAT+N ELF
Sbjct: 283 EIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFS 342
Query: 1173 TYF 1175
+F
Sbjct: 343 NFF 345
Score = 72 (30.4 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCG 266
++ D+ L+ Y +ILDE HER + D ++G + + G
Sbjct: 283 EIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSG 322
Score = 71 (30.1 bits), Expect = 3.9e-73, Sum P(3) = 3.9e-73
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
+ D L+ Y ++LDE HER + D ++G +K ++ S
Sbjct: 284 IMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITS 321
Score = 55 (24.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 918 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
D +L L+ GA++ +VT+LG +S LP+ L +L+ + F + ++ D+A
Sbjct: 567 DAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVI--DIA 624
Score = 55 (24.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 968 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
D +L L+ GA++ +VT+LG +S LP+ L +L+ + F + ++ D+A
Sbjct: 567 DAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVI--DIA 624
Score = 55 (24.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 1018 DTML-LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
D +L L+ GA++ +VT+LG +S LP+ L +L+ + F + ++ D+A
Sbjct: 567 DAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPVI--DIA 624
Score = 39 (18.8 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 138 RQDSGLITDIPGPDASLSSRERALRHG 164
+ + GL T + P + S+R+RA R G
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAG 508
Score = 38 (18.4 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 741 GLITDIPGPDASLSSRERALRHG 763
GL T + P + S+R+RA R G
Sbjct: 486 GLSTLLTTPISQASARQRAGRAG 508
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 511 (184.9 bits), Expect = 5.2e-73, Sum P(5) = 5.2e-73
Identities = 111/251 (44%), Positives = 167/251 (66%)
Query: 424 ERGDVLIFMSGISEISSIV-RAAQEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
E G +L+F+ G+SEI+ ++ R A Y + S W+ LPLHS+++ EQ +VF P+G+
Sbjct: 881 EEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWL-LPLHSSIASTEQKKVFLRPPKGI 939
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK I++TNIAETSITI+ + +V+DSGK KE Y+ K+S++ E W+SKA+A QR GRAG
Sbjct: 940 RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAG 999
Query: 541 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA---P 596
R PG C+ LY+ ++ L+ Y PE+ RV + L L + +GLG ++ PFL P
Sbjct: 1000 RVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIK--PFLSKALEP 1057
Query: 597 PAEN-IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
P+E+ I S++ L + GA++ E +T LG L+ LPVD+ +GKML++G +F + +LS+
Sbjct: 1058 PSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSI 1117
Query: 656 AAVLSV-QSPF 665
AA LS +SPF
Sbjct: 1118 AAFLSCCKSPF 1128
Score = 204 (76.9 bits), Expect = 5.2e-73, Sum P(5) = 5.2e-73
Identities = 44/131 (33%), Positives = 84/131 (64%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ-- 77
K+ +K+ ++K T+ +LP+++ K++I+ + ++ V+++ G+TG GK+TQ+PQ+++
Sbjct: 582 KKMQKYKDMLK---TRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDM 638
Query: 78 -----AGFQRIACTQPRRIACISLSKRVAYETLSQ---YSN-LVGYQIRFEKHRREKTKI 128
G+ I CTQPR I++++RVA E + N +V YQ+R + R +KT++
Sbjct: 639 IDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRL 695
Query: 129 VFITEGLLLRQ 139
+F T G+LLR+
Sbjct: 696 LFCTTGILLRK 706
Score = 196 (74.1 bits), Expect = 1.6e-38, Sum P(5) = 1.6e-38
Identities = 44/118 (37%), Positives = 71/118 (60%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA---P 864
R PG C+ LY+ ++ L+ Y PE+ RV + L L + +GLG ++ PFL P
Sbjct: 1000 RVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIK--PFLSKALEP 1057
Query: 865 PAEN-IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
P+E+ I S++ L + GA++ E +T LG L+ LPVD+ +GKML++G +F + +L
Sbjct: 1058 PSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPIL 1115
Score = 170 (64.9 bits), Expect = 7.3e-36, Sum P(5) = 7.3e-36
Identities = 51/169 (30%), Positives = 93/169 (55%)
Query: 596 PPAEN-IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLS 654
PP+E+ I S++ L + GA++ E +T LG L+ LPVD+ +GKML++G +F + +LS
Sbjct: 1057 PPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILS 1116
Query: 655 LAAVLSV-QSPFT--------NR---AFRDPDCETARKELESN--HGDPLTVLNAYKEWL 700
+AA LS +SPF +R A E++ L +N D L ++ AY++W+
Sbjct: 1117 IAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESS-SNLNNNDRQSDHLLMVVAYEKWV 1175
Query: 701 GVKKDR--VRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
+ ++ ++ +C+ + + + + R +F +L D GLI ++P
Sbjct: 1176 RILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLI-NLP 1223
Score = 137 (53.3 bits), Expect = 5.2e-73, Sum P(5) = 5.2e-73
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA------EVKIILMSATINI 363
++ D L +++DE+HER L GDFLL ++K L+ + ++K+ILMSAT++
Sbjct: 706 KLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDA 765
Query: 364 ELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTK 400
F YF + II GR +P+ + + +RTK
Sbjct: 766 HQFSRYFGQ-CPIITAQGRTHPVTTYFLEDI-YERTK 800
Score = 117 (46.2 bits), Expect = 3.7e-21, Sum P(4) = 3.7e-21
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA------EVKIILMSATINI 1168
++ D L +++DE+HER L GDFLL ++K L+ + ++K+ILMSAT++
Sbjct: 706 KLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDA 765
Query: 1169 ELFHTYFNR 1177
F YF +
Sbjct: 766 HQFSRYFGQ 774
Score = 97 (39.2 bits), Expect = 2.6e-29, Sum P(4) = 2.6e-29
Identities = 62/239 (25%), Positives = 104/239 (43%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN-----FVHHSX 1084
GA++ E +T LG L+ LPVD+ +GKML++G +F + +L + L+ FV+
Sbjct: 1074 GALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKD 1133
Query: 1085 XXXXXXAGERLESMDANEVEFRLKHDPKQVQVAADNFLS--SYD--VLVLDE----IHER 1136
L S D E L ++ +Q +D+ L +Y+ V +L E E
Sbjct: 1134 EQNVDRVKLALLS-DKLESSSNLNNNDRQ----SDHLLMVVAYEKWVRILHEQGFKAAES 1188
Query: 1137 HLHGDFL-LGVIKCLLHSTAEVKIILMS-ATINI--------ELFHTYFNRIAKDLLSGS 1186
FL V++ + E ++L IN+ E F +F+ D
Sbjct: 1189 FCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKGKGRRKENFDVWFS----DKTQPF 1244
Query: 1187 TARSHKDVTILKVILASGLYPQVAIG--DEFN--TSETVKEALFHCKDKGFVSLHPFSV 1241
S ++ ++K IL +GL P +A G + ET + A++H K V +H S+
Sbjct: 1245 NMYS-QEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWH-DGKREVHIHRNSI 1301
Score = 96 (38.9 bits), Expect = 2.5e-28, Sum P(5) = 2.5e-28
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 971
GA++ E +T LG L+ LPVD+ +GKML++G +F + +L
Sbjct: 1074 GALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPIL 1115
Score = 96 (38.9 bits), Expect = 2.5e-28, Sum P(5) = 2.5e-28
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 1021
GA++ E +T LG L+ LPVD+ +GKML++G +F + +L
Sbjct: 1074 GALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPIL 1115
Score = 90 (36.7 bits), Expect = 5.2e-73, Sum P(5) = 5.2e-73
Identities = 19/86 (22%), Positives = 44/86 (51%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEV 1327
+N + ++ +V++ LET K + + + ++LLF +I+ + + D W+++
Sbjct: 1303 KNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQSGSVTIDGWLKL 1362
Query: 1328 FVPLQEAKSTADVNQLEHSLTRDLVQ 1353
P Q A ++ HS+ +DL++
Sbjct: 1363 TAPAQTAVLFKELRLTLHSILKDLIR 1388
Score = 86 (35.3 bits), Expect = 1.2e-67, Sum P(5) = 1.2e-67
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIH 329
+ D L +++DE+HER L GDFLL ++K L+ + DN L V+++
Sbjct: 707 LVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQ---SWDNALPKLKVILMSATV 763
Query: 330 ERH 332
+ H
Sbjct: 764 DAH 766
Score = 72 (30.4 bits), Expect = 3.3e-66, Sum P(5) = 3.3e-66
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L +I+DEVHER L GDFLL ++
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIIL 738
Score = 47 (21.6 bits), Expect = 2.8e-13, Sum P(4) = 2.8e-13
Identities = 34/144 (23%), Positives = 62/144 (43%)
Query: 419 KYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAP- 477
++P T R +I S S + QE E + +++ + S EE+D + P
Sbjct: 129 RFPSTGRSVAVISKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRDEEEEDSLSSCQPS 188
Query: 478 --EGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQR 535
+ + + + E + D R V SG S++V AK ++ + KA +R
Sbjct: 189 QADWIHQYMKRLEEEELESS-DDERDKV-SGP---RSFEVIAKEYCVERYNAIKA---KR 240
Query: 536 KG-RAGRTGPGVCYRLYSEEQYSL 558
KG ++G++ G+ EE +L
Sbjct: 241 KGDKSGQSQAGLAICKLKEEMNAL 264
Score = 37 (18.1 bits), Expect = 5.2e-73, Sum P(5) = 5.2e-73
Identities = 4/13 (30%), Positives = 12/13 (92%)
Query: 1238 PFSVFTSQPDVLR 1250
PF++++ +P+V++
Sbjct: 1243 PFNMYSQEPEVVK 1255
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 597 (215.2 bits), Expect = 5.5e-73, Sum P(2) = 5.5e-73
Identities = 139/444 (31%), Positives = 243/444 (54%)
Query: 300 VIKCLLHSTV--EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILM 357
VIK + + E N L Y V+++DE HER L+ D L+G++K +L ++K+++
Sbjct: 584 VIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVT 643
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIID 417
SAT+N + F +F A +PGR YP+ + + D ++ +R + I
Sbjct: 644 SATMNSQKFSDFFGG-APQFTIPGRTYPVDIMFAKAPCSDYVEAA-------VRQVLQIH 695
Query: 418 KKYPRTERGDVLIFMSGISEISSIVRA-AQEYNEKSQG--WIVLPLHSTLSLEEQDRVFH 474
P GD+L+FM+G +I + A N+ +LP++S + + Q ++F
Sbjct: 696 LSQPA---GDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFD 752
Query: 475 YAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQ 534
A G+RK +V+TNIAETS+T+ GI +VVD+G K Y+ + TLQ IS+A+A Q
Sbjct: 753 SAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQ 812
Query: 535 RKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL 593
R GRAGRTGPG+ YRLY+E Y + E + PEI+R ++ + +L L +G+ ++ F F+
Sbjct: 813 RAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFM 872
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
+ PP + + +S+ L GA+D+ ++T+LG+ +S P+D L K+++ + + ++
Sbjct: 873 DRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEII 932
Query: 654 SLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWC 713
++ ++LSV S F R + + AR++ D L +LN Y+ W +++ S WC
Sbjct: 933 TIVSMLSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHW---QRNGY-SNSWC 988
Query: 714 KRRGIEEQRFYEVTKLRSQFKQVL 737
+ + + +R Q +++
Sbjct: 989 SKHFLHSKTLKRARDIRQQLVEIM 1012
Score = 230 (86.0 bits), Expect = 5.5e-73, Sum P(2) = 5.5e-73
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 20 KQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG 79
K+ +F+ RE + LP +++++ + +V+I+ G+TG GK+TQ+ Q+L + G
Sbjct: 474 KKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDG 533
Query: 80 FQR---IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
+ R I CTQPRR+A +S++KRV+ E + + VGY IRFE T I ++T+G+L
Sbjct: 534 YHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVL 593
Query: 137 LRQ 139
LR+
Sbjct: 594 LRE 596
Score = 189 (71.6 bits), Expect = 9.1e-32, Sum P(3) = 9.1e-32
Identities = 41/132 (31%), Positives = 78/132 (59%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG+ YRLY+E Y + E + PEI+R ++ + +L L +G+ ++ F F++ PP +
Sbjct: 819 RTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPND 878
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ +S+ L GA+D+ ++TTLG+ +S P+D L K+++ + + ++ + L
Sbjct: 879 TLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSML 938
Query: 928 NFGAI--DSKER 937
+ ++ KER
Sbjct: 939 SVPSVFYRPKER 950
Score = 128 (50.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 1120 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIA 1179
N L Y V+++DE HER L+ D L+G++K +L ++K+++ SAT+N + F +F
Sbjct: 601 NNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAP 660
Query: 1180 KDLLSGST 1187
+ + G T
Sbjct: 661 QFTIPGRT 668
Score = 80 (33.2 bits), Expect = 9.1e-32, Sum P(3) = 9.1e-32
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y V+++DE HER L+ D L+G++K +L
Sbjct: 603 LEKYSVIIMDEAHERSLNTDILMGLLKKVL 632
Score = 75 (31.5 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 232 NFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
N L Y ++I+DE HER L D L+G++ L
Sbjct: 601 NNLEKYSVIIMDEAHERSLNTDILMGLLKKVL 632
Score = 64 (27.6 bits), Expect = 3.9e-18, Sum P(4) = 3.9e-18
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 1018 DTML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1075
DT++ L +L GA+D+ ++T+LG+ +S P+D L K+++ + + ++ +
Sbjct: 878 DTLMASLYEL-WTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVS 936
Query: 1076 ALNFVHHSXXXXXXXAGERLESMDANEVEFRL 1107
L S ER E DA +F +
Sbjct: 937 ML-----SVPSVFYRPKERAEESDAAREKFNV 963
Score = 63 (27.2 bits), Expect = 4.9e-18, Sum P(4) = 4.9e-18
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 918 DTML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 975
DT++ L +L GA+D+ ++T+LG+ +S P+D L K+++ + + ++ +
Sbjct: 878 DTLMASLYEL-WTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVS 936
Query: 976 ALNFGAI--DSKER 987
L+ ++ KER
Sbjct: 937 MLSVPSVFYRPKER 950
Score = 63 (27.2 bits), Expect = 4.9e-18, Sum P(4) = 4.9e-18
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 968 DTML--LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 1025
DT++ L +L GA+D+ ++T+LG+ +S P+D L K+++ + + ++ +
Sbjct: 878 DTLMASLYEL-WTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVS 936
Query: 1026 ALNFGAI--DSKER 1037
L+ ++ KER
Sbjct: 937 MLSVPSVFYRPKER 950
Score = 42 (19.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 30/126 (23%), Positives = 51/126 (40%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSM-FHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETA 678
+TS+ SDL ++ LG LV F + S A L+ S +D + E A
Sbjct: 397 ITSVRDPQSDLAINARLGSRLVRERREFRERQKAASAATSLAGTSLGNVMGLKDSNDEDA 456
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR-FYEVTKLRSQFKQVL 737
+ P+ V ++ KKD ++ + + EQR F +R Q V+
Sbjct: 457 KAGTT-----PVKVAGRSEQ--SNKKDT----EFARTKSYREQREFLPAFAVREQLLSVI 505
Query: 738 GDSGLI 743
D+ ++
Sbjct: 506 RDNQVL 511
Score = 39 (18.8 bits), Expect = 3.9e-18, Sum P(4) = 3.9e-18
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 860 FLEAPPAENIESSVRSLTQ 878
F +AP ++ +E++VR + Q
Sbjct: 675 FAKAPCSDYVEAAVRQVLQ 693
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 564 (203.6 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 231 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 287
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 288 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 340
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 341 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 400
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 401 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 460
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 461 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 520
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 521 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 580
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 581 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 635
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 636 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 685
Score = 215 (80.7 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 43/112 (38%), Positives = 72/112 (64%)
Query: 34 TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRR 90
T + P+ + ++++I V +I+ G+TG GK+TQ+P+YL +AGF + I TQPR+
Sbjct: 127 TTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRK 186
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
+A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 187 VAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 238
Score = 164 (62.8 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 477 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 536
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 537 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 569
Score = 74 (31.1 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 236 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 270
Score = 68 (29.0 bits), Expect = 1.1e-71, Sum P(3) = 1.1e-71
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 239 DPNLTKFSVIILDEAHERTLTTDILFGLL 267
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 316 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 352
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 583 (210.3 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 146/445 (32%), Positives = 238/445 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L YD +++DE HER L+ DF+LG +K +L ++K+I+ SATI+ + F +
Sbjct: 203 EMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKH 262
Query: 370 F---NRI-AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPY-----IRILSIIDKKY 420
F N + A II+V GR +P+++ Y P+ DR + D P ILS +D+
Sbjct: 263 FSSKNGLPAPIIEVSGRTFPVEMRYRPLN--DRAVIDDDDQSPQEVDIISGILSAVDE-L 319
Query: 421 PRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
GD+L+F++G EI A + N + VLPL++ L++ EQ+++F P
Sbjct: 320 SDCGNGDILVFLNGEREIRDTAAALVKANLRHTN--VLPLYARLTVSEQNQIFK--PHSG 375
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
R +++TN+AETS+T+ GI++V+D G + Y K+ L +S+ASA QR GR G
Sbjct: 376 RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCG 435
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 600
R G+C RLYSE+ Y AE++ PEI R ++ +++L + + LGD+ FPF+EAP N
Sbjct: 436 RVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRN 495
Query: 601 IESSVRSLTQHGAIDSKE---------------RVTSLGRFLSDLPVDIPLGKMLVFGSM 645
I VR L + A++S E ++T GR L+ P+D L KM+V
Sbjct: 496 ITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIE 555
Query: 646 FHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKD 705
F I+ +L + + LS+Q P + + + D +++LN ++ KKD
Sbjct: 556 FGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKD 615
Query: 706 RVRSKKWCKRRGIEEQRFYEVTKLR 730
+++ R + ++ F +LR
Sbjct: 616 LTQNQF----RKLCQREFLSYVRLR 636
Score = 204 (76.9 bits), Expect = 2.4e-30, Sum P(5) = 2.4e-30
Identities = 51/144 (35%), Positives = 78/144 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G+C RLYSE+ Y AE++ PEI R ++ +++L + + LGD+ FPF+EAP N
Sbjct: 436 RVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRN 495
Query: 869 IESSVRSLTQHGAIDSKE---------------RVTTLGRFLSDLPVDIPLGKMLVFGSM 913
I VR L + A++S E ++T GR L+ P+D L KM+V
Sbjct: 496 ITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIE 555
Query: 914 FHQIDTMLLLDLALNFGAIDSKER 937
F I+ +L++ AL+ D +ER
Sbjct: 556 FGCIEQILIIVSALSIQ--DPRER 577
Score = 190 (71.9 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 49/131 (37%), Positives = 79/131 (60%)
Query: 12 LLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQI 71
+LR+ D KQ +K +L KI + LP+++ +I + +VVIIAG+TG GK+TQI
Sbjct: 76 ILRSIQD-KQ-QKIRSLPKITYPEG-LPISENAAQISAAIDANQVVIIAGETGSGKTTQI 132
Query: 72 PQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKI 128
P+ ++ G I TQPRRIA +++ R+A E ++ VGY++RF E++ I
Sbjct: 133 PKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYI 192
Query: 129 VFITEGLLLRQ 139
+T+G+LL +
Sbjct: 193 KLMTDGILLAE 203
Score = 127 (49.8 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L YD +++DE HER L+ DF+LG +K +L ++K+I+ SATI+ + F +
Sbjct: 203 EMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKH 262
Query: 1175 FN 1176
F+
Sbjct: 263 FS 264
Score = 87 (35.7 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L YD +++DE HER L+ DF+LG +K +L
Sbjct: 207 DRLLLKYDTIIIDEAHERSLNIDFILGYLKQIL 239
Score = 80 (33.2 bits), Expect = 2.6e-71, Sum P(5) = 2.6e-71
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L YD +I+DE HER L DF+LG +
Sbjct: 203 EMQRDRLLLKYDTIIIDEAHERSLNIDFILGYL 235
Score = 68 (29.0 bits), Expect = 1.3e-16, Sum P(5) = 1.3e-16
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 987
A + ++T GR L+ P+D L KM+V F I+ +L++ AL+ D +ER
Sbjct: 523 ASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQ--DPRER 577
Score = 68 (29.0 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKER 1037
A + ++T GR L+ P+D L KM+V F I+ +L++ AL+ D +ER
Sbjct: 523 ASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQ--DPRER 577
Score = 64 (27.6 bits), Expect = 8.3e-15, Sum P(4) = 8.3e-15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
A + ++T GR L+ P+D L KM+V F I+ +L++ AL+
Sbjct: 523 ASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALS 570
Score = 58 (25.5 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 918 DTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 957
D L + L +NF +D K ++ GR L++L ++ GK+
Sbjct: 1032 DITLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQ-GKV 1070
Score = 58 (25.5 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 968 DTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 1007
D L + L +NF +D K ++ GR L++L ++ GK+
Sbjct: 1032 DITLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQ-GKV 1070
Score = 58 (25.5 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 1018 DTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM 1057
D L + L +NF +D K ++ GR L++L ++ GK+
Sbjct: 1032 DITLPIHLTMNFQVVDDKGKLIKQGRDLNELKAELQ-GKV 1070
Score = 44 (20.5 bits), Expect = 4.8e-72, Sum P(5) = 4.8e-72
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 1148 KCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSG---STARSHKDV 1194
KC + AE+ +++A I +E T + + K + + +SH D+
Sbjct: 1212 KCCDYVRAEIADCVLTAAIKVERALTLRHEVTKKMKGSVPLNVIQSHGDI 1261
Score = 41 (19.5 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 343 KCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIK 378
KC + AE+ +++A I +E T + + K +K
Sbjct: 1212 KCCDYVRAEIADCVLTAAIKVERALTLRHEVTKKMK 1247
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 551 (199.0 bits), Expect = 9.8e-72, Sum P(4) = 9.8e-72
Identities = 160/515 (31%), Positives = 269/515 (52%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHER 331
+D +LSS +VLDEIHER+L D L+ V+K LL+ ++ ++ + E
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 380
Query: 332 ----HLHGDFLLGVIKCLLHSTAE-VKIILMSATINIEL----FHTYFNRIAK-----II 377
H+ G F V++ LL E ++ + + + NR K I
Sbjct: 381 CPMIHIPG-FTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIY 439
Query: 378 KV--PGRLYPIQLEYHP-IVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMS 433
K P + ++ Y V+ ++ + +K+D + ++ I + E G +L+F+
Sbjct: 440 KERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLE---EEDGAILVFLP 496
Query: 434 GISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETS 493
G IS++ SQ V+ T+S +VF P G+RK +++TNIAETS
Sbjct: 497 GWDNISTLHDLLM-----SQ---VMFKSGTMS-----QVFKRTPPGVRKIVIATNIAETS 543
Query: 494 ITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSE 553
ITID + +V+D GK+KE +D +ST+ W+SKA+A+QRKGRAGR PG CY LY+
Sbjct: 544 ITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG 603
Query: 554 EQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQH 611
+ SLL +Y PEI R ++ L L + + LG + F ++ P E + S+R L +
Sbjct: 604 LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMEL 663
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
A+D +E +T LG L+ LPV+ +GKM++FG++F +D VL++AA LS + PF +
Sbjct: 664 NALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGK 723
Query: 672 DPDCETARKEL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKK-WCKRRGIEEQRFYEVTKL 729
+ + RKEL + D LTV+NA++ W ++ R +K +C + + +
Sbjct: 724 EKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNM 783
Query: 730 RSQFKQVLGDSGLITDI-P-GPDASLSS-RERALR 761
+ QF + L +G ++ P P+++++S E+ ++
Sbjct: 784 KGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIK 818
Score = 206 (77.6 bits), Expect = 3.5e-33, Sum P(4) = 3.5e-33
Identities = 45/123 (36%), Positives = 73/123 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG CY LY+ + SLL +Y PEI R ++ L L + + LG + F ++ P
Sbjct: 591 RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN 650
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
E + S+R L + A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +
Sbjct: 651 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS 710
Query: 927 LNF 929
L+F
Sbjct: 711 LSF 713
Score = 192 (72.6 bits), Expect = 9.8e-72, Sum P(4) = 9.8e-72
Identities = 42/131 (32%), Positives = 78/131 (59%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
D ++K+ ++++ + LP ++E+++ + +V +I+G+TGCGK+TQ+ Q+++
Sbjct: 187 DLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD 246
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYS--NLVGYQIRFEKHR-REKTK 127
+R I CTQPRRI+ IS+++RVA E N GYQIR + R++
Sbjct: 247 NYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGS 306
Query: 128 IVFITEGLLLR 138
I++ T G++L+
Sbjct: 307 ILYCTTGIILQ 317
Score = 154 (59.3 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 1177
+D +LSS +VLDEIHER+L D L+ V+K LL+ +++K+ILMSAT+N E F YF
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGN 380
Query: 1178 IAKDLLSGST 1187
+ G T
Sbjct: 381 CPMIHIPGFT 390
Score = 104 (41.7 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 927 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 661 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 713
Score = 104 (41.7 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 977 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 661 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 713
Score = 104 (41.7 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 1027 LNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ A+D +E +T LG L+ LPV+ +GKM++FG++F +D +L + +L+F
Sbjct: 661 MELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF 713
Score = 82 (33.9 bits), Expect = 9.8e-72, Sum P(4) = 9.8e-72
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1176 NRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
+R KD S + + K I+K ++ +GLYP+VA N + K + K G V+
Sbjct: 799 SRNPKDPESNINSDNEK---IIKAVICAGLYPKVA-KIRLNLGKKRKMVKVYTKTDGLVA 854
Query: 1236 LHPFSVFTSQPD 1247
+HP SV Q D
Sbjct: 855 VHPKSVNVEQTD 866
Score = 78 (32.5 bits), Expect = 9.8e-72, Sum P(4) = 9.8e-72
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVISPPLH 264
+D +LSS ++LDE+HER+L D L+ V+ L+
Sbjct: 321 SDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLN 355
Score = 41 (19.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
LPG + IS+ H LL+ + ++ V P ++ +++ ++ T+ +V+
Sbjct: 495 LPGWDNISTLHDLLMSQVMFKSGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVY 551
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 534 (193.0 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 133/379 (35%), Positives = 212/379 (55%)
Query: 386 IQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER-GDVLIFMSGISEISSIVRA 444
I+ + P+ + + +++ + ID + ++ G +LIF+ G++EI+
Sbjct: 847 IRADADPVAKAIQNLGTRINYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRACGM 906
Query: 445 AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVD 504
+ N VLPLH++L +EQ +VF P G RK +V+TN+AETSITID I VVD
Sbjct: 907 LRSLNCLH----VLPLHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVD 962
Query: 505 SGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYST 564
+GKVKE SYD M L+E + S A+ +QR+GRAGR G CY+LY+ + S +AE
Sbjct: 963 TGKVKETSYDAANNMRRLEETFASLAACKQRRGRAGRVQAGECYKLYTRKLESQMAERPE 1022
Query: 565 PEIRRVSIDSLLLSLVCMGLGDVRKF-PFLEAPP-AENIESSVRSLTQHGAIDSKERVTS 622
PE+RRV ++ L LS+ MG+ DVR F PP A +E ++ L + G +D +E +T+
Sbjct: 1023 PEMRRVPLEQLCLSVRAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGEE-LTA 1081
Query: 623 LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV-QSPFTNRAFRDPDCETARKE 681
LGR L+ +P D+ GK++V+G++F ++ +S+AA+LS + F + + AR
Sbjct: 1082 LGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARAR 1141
Query: 682 LESNHGDPLTVLNAYKEWLGVKKD-RVRSK---KWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+ GD LT L A++ W + +D V+ + +C + +V R+Q+ L
Sbjct: 1142 FAAGDGDLLTDLRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSL 1201
Query: 738 GDSGLITDIPGPDASLSSR 756
+ GL+ PG DA S+R
Sbjct: 1202 VELGLVR--PG-DAGYSNR 1217
Score = 205 (77.2 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 53/148 (35%), Positives = 81/148 (54%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
++ ++++ K+ + LP + EI+ TV + +V IIAG+TG GKSTQ Q+++
Sbjct: 613 EWLRRQETPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILD 672
Query: 78 AGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVF 130
+ R I TQPRRI+ + L+ RV+ E SQ VGY IR E KT+I F
Sbjct: 673 DLYGRGLGHAANILVTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITF 732
Query: 131 ITEGLLLRQ---DSGLITDIPGPDASLS 155
+T G+LLR+ G + D+ A +S
Sbjct: 733 VTTGVLLRRLQVSGGRVEDVVASLADVS 760
Score = 200 (75.5 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 45/124 (36%), Positives = 74/124 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF-PFLEAPP-A 866
R G CY+LY+ + S +AE PE+RRV ++ L LS+ MG+ DVR F PP A
Sbjct: 999 RVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLARAPTPPEA 1058
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+E ++ L + G +D +E +T LGR L+ +P D+ GK++V+G++F ++ + +
Sbjct: 1059 AAVEGAITMLRRMGCLDGEE-LTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAAL 1117
Query: 927 LNFG 930
L+ G
Sbjct: 1118 LSSG 1121
Score = 132 (51.5 bits), Expect = 1.5e-71, Sum P(3) = 1.5e-71
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN----R 372
L+ +V+DE+HER L DFLL +I+ +L ++K++LMSAT++ F +YF R
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIR 815
Query: 373 IAKIIKVPGRLYPIQLEYH 391
+ ++ ++ GR +P+ +Y+
Sbjct: 816 VGQV-EIAGRTFPVT-DYY 832
Score = 120 (47.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
L+ +V+DE+HER L DFLL +I+ +L ++K++LMSAT++ F +YF
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYF 809
Score = 116 (45.9 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 70/306 (22%), Positives = 122/306 (39%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHHSXXXXXX 1089
G +D +E +T+LGR L+ +P D+ GK++V+G++F ++ + + L+ S
Sbjct: 1072 GCLDGEE-LTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAALLS----SGRGVFV 1126
Query: 1090 XAGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLD-EIHERHLHG---DFLLG 1145
++ + A E R + F ++D ++ D + +RH+ D L
Sbjct: 1127 SPPDKRDQ--AREARARFAAGDGDLLTDLRAF-QAWDAMMRDPSVQQRHVRSFCDDNFLS 1183
Query: 1146 VIKCLLHSTAEVKIILMSATINIELFHT----YFNRIAKDLLSGSTARSHKDVTILKVIL 1201
+ L A + ++ + + L Y NR S A S +L+ +
Sbjct: 1184 YLT--LSDVASARTQYFTSLVELGLVRPGDAGYSNRGPPPSTSEGGASSKY---LLRALT 1238
Query: 1202 ASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPPP 1261
AS PQ+A + F G V + P + + E+ V P
Sbjct: 1239 ASAFAPQIA-------RIQYPDKKFAASMSGAVEIDPEAKTIRYYN----QENGRVFVHP 1287
Query: 1262 GLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
L S L Y S++ TSK F+ + A TLLLF+ AI ++ LV
Sbjct: 1288 SSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLTPFNAY-TLLLFAGAIELDTLGRGLVV 1346
Query: 1322 DSWIEV 1327
D W+ +
Sbjct: 1347 DGWLRL 1352
Score = 85 (35.0 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 980
G +D +E +T+LGR L+ +P D+ GK++V+G++F ++ + + L+ G
Sbjct: 1072 GCLDGEE-LTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAALLSSG 1121
Score = 85 (35.0 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 1030
G +D +E +T+LGR L+ +P D+ GK++V+G++F ++ + + L+ G
Sbjct: 1072 GCLDGEE-LTALGRQLAAIPADLRCGKLMVYGAVFGCLEDCVSVAALLSSG 1121
Score = 76 (31.8 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 257 GVISPPLHCGGEIVAADYFLSSYDV--LVLDEIHERHLHGDFLLGVIKCLL 305
GV+ L G V D S DV +V+DE+HER L DFLL +I+ +L
Sbjct: 736 GVLLRRLQVSGGRVE-DVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVL 785
Score = 65 (27.9 bits), Expect = 1.6e-64, Sum P(3) = 1.6e-64
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L+ +++DEVHER L DFLL +I
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSII 781
Score = 42 (19.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 716 RGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRERAL 760
RG E + ++ V+ ++ ++ GL+ DI ++ S + L
Sbjct: 542 RGEEMKIYFMVSWVQESINSIIERPGLLRDIAAVSSAASEDKTTL 586
Score = 38 (18.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 432 MSGISEISSIVRAAQEYNEKSQGWIVLPLHSTL 464
MSG EI + + YN+++ V P STL
Sbjct: 1260 MSGAVEIDPEAKTIRYYNQENGRVFVHP-SSTL 1291
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 543 (196.2 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 131/371 (35%), Positives = 215/371 (57%)
Query: 313 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNR 372
+D L + L +DE+HER +H DFLL ++K LL +++ILMSAT++ L YF
Sbjct: 829 SDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGT 888
Query: 373 IAKIIKVPGRLYPIQLEYH----------PIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
+IK+ + I EY P + +S+ +D ++++ I K
Sbjct: 889 -CPVIKLTS-YHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHEMILQLIVHIVTKVSS 946
Query: 423 TERGDVLIFMSG---ISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
T +LIF+ G IS+ ++R +++ +++LPLHS++S++ Q +VF P
Sbjct: 947 TSEDSILIFLPGWEDISQTRELMRRHPMLRNENE-FLILPLHSSVSMQLQAKVFEKPPPK 1005
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTL-QEFWISKASAEQRKGR 538
+RK ++STNIAETSITI+ + +V+DS KVK + Y T + TL Q W K+S +QR+GR
Sbjct: 1006 IRKIVLSTNIAETSITINDVVYVIDSAKVK-LKYHETQRDLTLFQTVWACKSSLKQRRGR 1064
Query: 539 AGRTGP-GVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEA 595
AGR GVCY + S ++Y+ L E+ E+RR+ + L L + + LGDV F LE
Sbjct: 1065 AGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEP 1124
Query: 596 PPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSL 655
P ++I++++ L GA+++ + +T LG LS +PVD +GKM++ GS F +D +L++
Sbjct: 1125 PETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTI 1184
Query: 656 AAVLSVQSPFT 666
A+ + ++P T
Sbjct: 1185 ASFSNQKNPIT 1195
Score = 223 (83.6 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 45/126 (35%), Positives = 80/126 (63%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ---- 77
K + + +I + + LP+ + + +I+++ +++II GDTGCGK+TQIPQ++++
Sbjct: 701 KRQTAEYKRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMID 760
Query: 78 ---AGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKT-KIVFITE 133
A + I TQPRRI+ + ++R+AYE L + + VGYQIRF+ + T K++ T
Sbjct: 761 SGHAPYCNIVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTP 820
Query: 134 GLLLRQ 139
G+LL++
Sbjct: 821 GILLKR 826
Score = 196 (74.1 bits), Expect = 3.4e-32, Sum P(4) = 3.4e-32
Identities = 41/113 (36%), Positives = 69/113 (61%)
Query: 813 GVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIE 870
GVCY + S ++Y+ L E+ E+RR+ + L L + + LGDV F LE P ++I+
Sbjct: 1072 GVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEPPETKSID 1131
Query: 871 SSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+++ L GA+++ + +T LG LS +PVD +GKM++ GS F +D +L +
Sbjct: 1132 NAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTI 1184
Score = 119 (46.9 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 1118 ADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+D L + L +DE+HER +H DFLL ++K LL +++ILMSAT++ L YF
Sbjct: 829 SDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYF 886
Score = 110 (43.8 bits), Expect = 2.2e-23, Sum P(4) = 2.2e-23
Identities = 54/219 (24%), Positives = 105/219 (47%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHH 1082
++L ++ GA+++ + +T LG LS +PVD +GKM++ GS F +D +L + N +
Sbjct: 1134 INLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTIASFSNQKNP 1193
Query: 1083 SXXXXXXXAGERLESMDANEVEF------RLKHDPKQV--QVAADN--FLSSYDVLV--- 1129
+ + N + + PK + ++ +D+ FL+ ++ +
Sbjct: 1194 ITTLYNQGNDNNNNNNNNNNNSYYNNYYQQQPQQPKNLYPELQSDHLSFLNIFNGWLQSR 1253
Query: 1130 LDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD-LLSGSTA 1188
+D +++ DFL I LL +VK L+S TIN +L N +D ++ S
Sbjct: 1254 MDGTEDQYCQ-DFLS--IP-LLQQILKVKKQLLS-TIN-DL--GIINAQLRDGFVNNSFF 1305
Query: 1189 RSHKD-VTILKVILASGLYPQVAIGDEFNTSETVKEALF 1226
+ + + I++ I+ SGL+P +A + +T+ E F
Sbjct: 1306 NENSNNLDIIRAIICSGLFPNIARQRKKREFKTLSENTF 1344
Score = 102 (41.0 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++L ++ GA+++ + +T LG LS +PVD +GKM++ GS F +D +L +
Sbjct: 1134 INLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTI 1184
Score = 102 (41.0 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++L ++ GA+++ + +T LG LS +PVD +GKM++ GS F +D +L +
Sbjct: 1134 INLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTI 1184
Score = 78 (32.5 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 272 ADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
+D L + L +DE+HER +H DFLL ++K LL
Sbjct: 829 SDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLL 862
Score = 63 (27.2 bits), Expect = 8.3e-70, Sum P(5) = 8.3e-70
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 230 TDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+D L + L +DEVHER ++ DFLL ++
Sbjct: 829 SDMKLHNVSHLFIDEVHERDIHTDFLLIIL 858
Score = 59 (25.8 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 681 ELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDS 740
EL+S+H L+ LN + WL + D + +C+ + ++ K++ Q + D
Sbjct: 1234 ELQSDH---LSFLNIFNGWLQSRMDGTEDQ-YCQDF-LSIPLLQQILKVKKQLLSTINDL 1288
Query: 741 GLI 743
G+I
Sbjct: 1289 GII 1291
Score = 59 (25.8 bits), Expect = 2.3e-71, Sum P(5) = 2.3e-71
Identities = 22/115 (19%), Positives = 53/115 (46%)
Query: 1271 ISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAI--HTNSDFTRLVFD-SWIEV 1327
++ K +++ +T F+ R+P + LL S+ I T+++ + + + + I+
Sbjct: 1358 LNPKENWVIFEEKFKTKLTFIKTITRIPEISLLLFGSTPIFNQTSTENSTVSINGTQIKF 1417
Query: 1328 FVPLQEAKSTADVN-QLEHSLTRDLVQ--FMSSATHLAYSIRRLLAADLKTMYRR 1379
++P + Q+E SL + + Q + +S + Y ++ L A L + +
Sbjct: 1418 YIPTLSCHLLLSIREQMEKSLQKYIEQSDYSNSFSKTDYEFQKCLMALLSFNFNK 1472
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDL 630
E + R L + G I+S + +S F SD+
Sbjct: 433 EKACRVLAEMGLINSSNKGSSTTNFPSDM 461
Score = 39 (18.8 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 1197 LKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDV-LRISEDD 1255
L+VIL S + F T +K +H + + L S + P + R + D
Sbjct: 868 LRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQEYF-LEDISKQLNDPTISYRDEQSD 926
Query: 1256 IVD 1258
VD
Sbjct: 927 DVD 929
Score = 38 (18.4 bits), Expect = 3.6e-52, Sum P(5) = 3.6e-52
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 217 FRLKHDPKQVQVATDNFLSSYDIL 240
F+L H ++ D +LSSYD L
Sbjct: 238 FQLLHHNDSNKL-NDEYLSSYDRL 260
Score = 38 (18.4 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 1252 SEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLV 1292
SED I+ + LPG IS +L+ +L FL+
Sbjct: 948 SEDSIL-----IFLPGWEDISQTRELMRRHPMLRNENEFLI 983
Score = 37 (18.1 bits), Expect = 1.6e-48, Sum P(4) = 1.6e-48
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 304 LLHSTVEVAADNFLSSYDVL 323
L H+ D +LSSYD L
Sbjct: 241 LHHNDSNKLNDEYLSSYDRL 260
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 482 (174.7 bits), Expect = 6.6e-71, Sum P(4) = 6.6e-71
Identities = 121/369 (32%), Positives = 200/369 (54%)
Query: 400 KSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQE--YNEKSQGWIV 457
K E++D G ++++ I ++ G +L+F+ G EIS + + S +I+
Sbjct: 553 KPEEVDVGLIVKLMKKICSD---SKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFII 609
Query: 458 LPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTA 517
L LHS + EEQ +VF+ P G RK +++TNIAE+++TID + +V+DSG++KE SYD
Sbjct: 610 LCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYN 669
Query: 518 KMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLL 577
+STLQ W+SKA+A+QR GRAGR G+CY LYS+ + + L EY PE+ R+ +D L L
Sbjct: 670 DVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCL 729
Query: 578 SLVCMGLG-DVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDI 634
+ + +V F ++ P A++IE+++ L GA+ +E +T LG+ LPV
Sbjct: 730 QVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHP 789
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPD---CETARKELES---NHGD 688
+ KM+ F + + +D L LA + PFT D A+ EL S +H D
Sbjct: 790 RISKMIYFAILVNCLDPALILACAADEKDPFT-MPLSPGDRKKAAAAKHELASLYGDHSD 848
Query: 689 PLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPG 748
L + A++ W K ++K++C + I + + L + + L G+I
Sbjct: 849 HLATVAAFQCWKNAKASG-QAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPS-SS 906
Query: 749 PDASLSSRE 757
+ SL++ +
Sbjct: 907 SNCSLNAHD 915
Score = 244 (91.0 bits), Expect = 6.6e-71, Sum P(4) = 6.6e-71
Identities = 50/127 (39%), Positives = 79/127 (62%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ------RI 83
+I E ++ LP+A ++ II V +VV+IAG+TGCGK+TQ+PQYL+ + +I
Sbjct: 209 EIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKI 268
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ--DS 141
CTQPRRI+ IS+S R+++E VGY++R + ++ +VF T G+LLR
Sbjct: 269 ICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGK 328
Query: 142 GLITDIP 148
G+ + +P
Sbjct: 329 GVNSSVP 335
Score = 164 (62.8 bits), Expect = 9.3e-37, Sum P(4) = 9.3e-37
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLG-DVRKF--PFLEAPP 865
R G+CY LYS+ + + L EY PE+ R+ +D L L + + +V F ++ P
Sbjct: 693 RCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPV 752
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
A++IE+++ L GA+ +E +T LG+ LPV + KM+ F + + +D L+L
Sbjct: 753 AQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILAC 812
Query: 926 A 926
A
Sbjct: 813 A 813
Score = 146 (56.5 bits), Expect = 6.6e-71, Sum P(4) = 6.6e-71
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER + DF+L +++ LL S +++ILMSAT++ E F YF +++VPG
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGG-CPVVRVPGF 398
Query: 383 LYPIQ 387
YP++
Sbjct: 399 TYPVR 403
Score = 119 (46.9 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER + DF+L +++ LL S +++ILMSAT++ E F YF
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYF 387
Score = 73 (30.8 bits), Expect = 2.1e-27, Sum P(4) = 2.1e-27
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 976
+ GA+ +E +T LG+ LPV + KM+ F + + +D L+L A
Sbjct: 765 DIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACA 813
Score = 73 (30.8 bits), Expect = 2.1e-27, Sum P(4) = 2.1e-27
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
+ GA+ +E +T LG+ LPV + KM+ F + + +D L+L A
Sbjct: 765 DIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACA 813
Score = 73 (30.8 bits), Expect = 2.1e-27, Sum P(4) = 2.1e-27
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
+ GA+ +E +T LG+ LPV + KM+ F + + +D L+L A
Sbjct: 765 DIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACA 813
Score = 67 (28.6 bits), Expect = 1.1e-62, Sum P(4) = 1.1e-62
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHS 307
+++DEIHER + DF+L +++ LL S
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPS 365
Score = 63 (27.2 bits), Expect = 2.9e-62, Sum P(4) = 2.9e-62
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER Y DF+L ++
Sbjct: 340 IIVDEIHERDSYSDFMLMIL 359
Score = 47 (21.6 bits), Expect = 6.6e-71, Sum P(4) = 6.6e-71
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 1184 SGSTARSHKDVTILKVILASGLYPQV 1209
S + +H D IL+ ++A GLYP +
Sbjct: 907 SNCSLNAH-DPGILRAVIAVGLYPML 931
Score = 44 (20.5 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 1265 LPGRNVISSKHQLLVYMSLLETSKPFLVNCL--RMPALQTLLLFS 1307
LPG IS + L+ S F++ CL R+PA + +F+
Sbjct: 582 LPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFN 626
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 459 (166.6 bits), Expect = 6.6e-70, Sum P(4) = 6.6e-70
Identities = 116/347 (33%), Positives = 189/347 (54%)
Query: 423 TERGDVLIFMSGISEISSIVRAAQE--YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGL 480
+E G +L+F+ G +I+ + E + S + ++ LHS + EQ +VF+ P G
Sbjct: 549 SEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGC 608
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK +++TNIAE+++TID + +V+DSG++KE SYD +STLQ W+SKA+A+QR+GRAG
Sbjct: 609 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAG 668
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA---PP 597
R PG+CY LYS + + + ++ PEI+R+ ++ L L + + + + FL+ PP
Sbjct: 669 RCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQKLLDPP 727
Query: 598 AENIESSVRSLTQH-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLA 656
+ ++ S+ Q GA+ +E +T LG LPV + KML F + + +D L+LA
Sbjct: 728 VDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLA 787
Query: 657 AVLSVQSPFTN--RAFRDPDCETARKELESNHG---DPLTVLNAYKEWLGVKKDRVRSKK 711
+ PFT A+ EL S G D L V+ A++ W K R S +
Sbjct: 788 CAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAK-GRGLSAE 846
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLI-TDIPGPDASLSSRE 757
+C + + + ++RSQ + L G+I DI S +SR+
Sbjct: 847 FCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISS--CSQNSRD 891
Score = 227 (85.0 bits), Expect = 6.6e-70, Sum P(4) = 6.6e-70
Identities = 44/122 (36%), Positives = 74/122 (60%)
Query: 23 EKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ- 81
+K L +I + ++ LP+ +K I V +V++I+G+TGCGK+TQ+PQYL+ +
Sbjct: 172 KKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSS 231
Query: 82 -----RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLL 136
+I CTQPRRI+ +S+S+R++ E +GY++R + + +VF T G+L
Sbjct: 232 KRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGIL 291
Query: 137 LR 138
LR
Sbjct: 292 LR 293
Score = 156 (60.0 bits), Expect = 6.6e-70, Sum P(4) = 6.6e-70
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 304 LLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINI 363
LL V + + +S +++DEIHER + DF+L +I+ LL S +++ILMSAT++
Sbjct: 291 LLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDA 350
Query: 364 ELFHTYFNRIAKIIKVPGRLYPIQLEY 390
E F YF +++VPG YP++ Y
Sbjct: 351 ERFSGYFGG-CPVVRVPGFTYPVRTLY 376
Score = 149 (57.5 bits), Expect = 4.1e-36, Sum P(5) = 4.1e-36
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEA---PP 865
R PG+CY LYS + + + ++ PEI+R+ ++ L L + + + + FL+ PP
Sbjct: 669 RCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQKLLDPP 727
Query: 866 AENIESSVRSLTQH-GAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLD 924
+ ++ S+ Q GA+ +E +T LG LPV + KML F + + +D L L
Sbjct: 728 VDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLA 787
Query: 925 LALNF 929
A ++
Sbjct: 788 CAADY 792
Score = 125 (49.1 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1113 QVQVAADNFLSSYDV--LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIEL 1170
+V V + S D+ +++DEIHER + DF+L +I+ LL S +++ILMSAT++ E
Sbjct: 293 RVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAER 352
Query: 1171 FHTYF 1175
F YF
Sbjct: 353 FSGYF 357
Score = 75 (31.5 bits), Expect = 1.4e-28, Sum P(5) = 1.4e-28
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
L + + GA+ +E +T LG LPV + KML F + + +D L L A ++
Sbjct: 736 LSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADY 792
Score = 75 (31.5 bits), Expect = 1.4e-28, Sum P(5) = 1.4e-28
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
L + + GA+ +E +T LG LPV + KML F + + +D L L A ++
Sbjct: 736 LSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADY 792
Score = 75 (31.5 bits), Expect = 1.4e-28, Sum P(5) = 1.4e-28
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
L + + GA+ +E +T LG LPV + KML F + + +D L L A ++
Sbjct: 736 LSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADY 792
Score = 73 (30.8 bits), Expect = 2.9e-61, Sum P(4) = 2.9e-61
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHS 307
+++DEIHER + DF+L +I+ LL S
Sbjct: 310 IIVDEIHERDCYSDFMLAIIRDLLPS 335
Score = 71 (30.1 bits), Expect = 4.7e-61, Sum P(4) = 4.7e-61
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 225 QVQVATDNFLSSYDI--LILDEVHERHLYGDFLLGVI 259
+V V + S DI +I+DE+HER Y DF+L +I
Sbjct: 293 RVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAII 329
Score = 63 (27.2 bits), Expect = 6.6e-70, Sum P(4) = 6.6e-70
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 1186 STARSHKDVTILKVILASGLYPQVA-IGDEF-NTSETVKEALFHCKDKGFVSLHPFSVFT 1243
S +++ +D IL+ +LA GLYP V + F N T+ E K + + F++ +
Sbjct: 884 SCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSS 943
Query: 1244 SQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLV 1279
+ D + D+I G+ + V LL+
Sbjct: 944 KKYDESLLVFDEITRGDGGMHIRNCTVARDLPLLLI 979
Score = 42 (19.8 bits), Expect = 4.1e-36, Sum P(5) = 4.1e-36
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 725 EVTKLRSQFKQVLGDS---GLITDIPGPDASLSSRERALRH 762
+V+ ++ +++ GDS ++ +PG D +R+R L +
Sbjct: 534 DVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLEN 574
Score = 39 (18.8 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 1230 DKGFVSLHPFSVFTSQ-PDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSK 1288
DK +++P V S ++R D D + LPG + I+ Q L+ S
Sbjct: 522 DKYMATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSA 581
Query: 1289 PFLVNCLR--MPALQTLLLFS 1307
F + CL +PA + +F+
Sbjct: 582 KFDIICLHSMVPAGEQKKVFN 602
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 485 (175.8 bits), Expect = 7.4e-70, Sum P(3) = 7.4e-70
Identities = 114/332 (34%), Positives = 183/332 (55%)
Query: 428 VLIFMSGISEI----SSIVRAAQEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLR 481
+L+F+ G+S+I S + + + E + W V PLHS+LS ++Q +VF AP G
Sbjct: 900 ILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCV-PLHSSLSPKDQQKVFEKAPNGRV 958
Query: 482 KCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGR 541
K +++TNIAETSITI+ + VVD G+V +M+++ S + E W SKAS QR GRAGR
Sbjct: 959 KVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGR 1018
Query: 542 TGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGD----VRKF--PFLEA 595
T G+C++++++ S L + TPEI R S+ L L + + ++ F +E
Sbjct: 1019 TSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEP 1078
Query: 596 PPAENIESSVRSLTQHGAI----DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
P +E I+SS+ L A+ ++ +T LG L+ LPVD+ +GKML+FG +F +D
Sbjct: 1079 PSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLDP 1138
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+L++AA L+ +SPF N D K N D T++NAY W +D +
Sbjct: 1139 ILTIAATLNYKSPFLNPP--DKTIRPMDKFSSPNQSDHQTLINAYNSWRKSIQDG-NEYQ 1195
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLI 743
+C+ + + L+ QF ++L + G +
Sbjct: 1196 FCRENYLSIPTLRTIQDLKLQFVEILSEIGFL 1227
Score = 244 (91.0 bits), Expect = 7.4e-70, Sum P(3) = 7.4e-70
Identities = 58/144 (40%), Positives = 92/144 (63%)
Query: 22 KEKFSTLMKIRE----TQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
K ++ L+K+ + + SLPV + K+E + + + +VV+I +TGCGKSTQIPQY+++
Sbjct: 605 KNEYDRLIKVDKGVIKKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILE 664
Query: 78 A------GFQ-RIACTQPRRIACISLSKRVAYE----TL-SQYSNLVGYQIRFEKHRREK 125
+ G + I CTQPRRI+ I +++RV+YE T+ + LVGYQIR E R +
Sbjct: 665 SFISQEKGSECNIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQS 724
Query: 126 TKIVFITEGLLLRQ--DSGLITDI 147
T+++F T G+LLR+ D I+D+
Sbjct: 725 TRLLFCTTGILLRRILDVSNISDL 748
Score = 175 (66.7 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 42/131 (32%), Positives = 72/131 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGD----VRKF--PFLE 862
RT G+C++++++ S L + TPEI R S+ L L + + ++ F +E
Sbjct: 1018 RTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIE 1077
Query: 863 APPAENIESSVRSLTQHGAI----DSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQID 918
P +E I+SS+ L A+ ++ +T LG L+ LPVD+ +GKML+FG +F +D
Sbjct: 1078 PPSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFRCLD 1137
Query: 919 TMLLLDLALNF 929
+L + LN+
Sbjct: 1138 PILTIAATLNY 1148
Score = 133 (51.9 bits), Expect = 3.5e-32, Sum P(3) = 3.5e-32
Identities = 78/328 (23%), Positives = 140/328 (42%)
Query: 1017 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1076
I+ ++ +D AL +E +T LG L+ LPVD+ +GKML+FG +F +D +L +
Sbjct: 1088 INELISID-ALKINQQQQQE-LTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAAT 1145
Query: 1077 LNFVHH--SXXXXXXXAGERLESMDANEVEFRLK---------HDPKQVQVAADNFLSSY 1125
LN+ + ++ S + ++ + + D + Q +N+LS
Sbjct: 1146 LNYKSPFLNPPDKTIRPMDKFSSPNQSDHQTLINAYNSWRKSIQDGNEYQFCRENYLS-- 1203
Query: 1126 DVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSG 1185
+ L I + L +L I L S KI + + + Y N + + G
Sbjct: 1204 -IPTLRTIQDLKLQFVEILSEIGFLPQSITAKKIAKLQQQQQ-QKGNNYSNDCIDEFV-G 1260
Query: 1186 STARSHKDVT-ILKVILASGLYPQVAIGD--EFNTSETVKEALFHCKDKGFVSLHPFSVF 1242
S+ + I+ +L +G+YP++A D + S+T A+ K+K S +
Sbjct: 1261 YIYNSNSSKSKIITSVLCAGMYPKIARIDYPDAKYSQTASGAI---KNK--YSPESLLLL 1315
Query: 1243 TSQPDVL--RISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFLVNCLRMPAL 1300
T P+ + E + P G V + ++Y ++TSK FL + + L
Sbjct: 1316 TKPPNCGPGKPLERVFIHPRSTNFKEGEWV----YPFIIYNDKVKTSKLFLHHITNLSPL 1371
Query: 1301 QTLLLFSSA--IHTNSDFTRLVFDSWIE 1326
TLLLFS I + + + D W++
Sbjct: 1372 -TLLLFSLGGNIEIDKSYQTISLDKWLK 1398
Score = 129 (50.5 bits), Expect = 7.4e-70, Sum P(3) = 7.4e-70
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIA-K 375
+S +++DE+HER DFLL +++ ++ ++KIILMSAT+N + YF
Sbjct: 745 ISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYFKCTDDS 804
Query: 376 IIKVPGRLYPIQLEY 390
I +PG +P++ Y
Sbjct: 805 IFSIPGFTFPVKNIY 819
Score = 113 (44.8 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+S +++DE+HER DFLL +++ ++ ++KIILMSAT+N + YF
Sbjct: 745 ISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYF 798
Score = 110 (43.8 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
E + +S++ L H + K + TT+ FL+ ++ P + + I+ ++ +D
Sbjct: 1043 EILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRA-IEPPSSEQIQ-----SSINELISID- 1095
Query: 926 ALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
AL +E +T LG L+ LPVD+ +GKML+FG +F +D +L + LN+
Sbjct: 1096 ALKINQQQQQE-LTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNY 1148
Score = 105 (42.0 bits), Expect = 2.8e-29, Sum P(3) = 2.8e-29
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 967 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 1026
I+ ++ +D AL +E +T LG L+ LPVD+ +GKML+FG +F +D +L +
Sbjct: 1088 INELISID-ALKINQQQQQE-LTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAAT 1145
Query: 1027 LNF 1029
LN+
Sbjct: 1146 LNY 1148
Score = 61 (26.5 bits), Expect = 9.8e-63, Sum P(3) = 9.8e-63
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
+S +++DE+HER DFLL +++
Sbjct: 745 ISDLSHIIIDEVHERSTDNDFLLIILR 771
Score = 59 (25.8 bits), Expect = 1.6e-62, Sum P(3) = 1.6e-62
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
+S +I+DEVHER DFLL ++
Sbjct: 745 ISDLSHIIIDEVHERSTDNDFLLIIL 770
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 544 (196.6 bits), Expect = 9.7e-70, Sum P(4) = 9.7e-70
Identities = 145/446 (32%), Positives = 232/446 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E D+ L Y +++DE HER L+ D LLG K LL ++K+I+ SAT+N + F +
Sbjct: 457 ETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAF 516
Query: 370 FNRIAKIIKVPGRLYPIQLEY--HPIVE-LDRTKSEKLDPGPYIRILSIIDKKYPRTERG 426
F A +PGR +P+Q Y +P+ + ++ S+ ++I D G
Sbjct: 517 FGN-APQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQA------VKIHLAND-----CSSG 564
Query: 427 DVLIFMSGISEISSIVRAAQE-----YNEKS--------QGWIVLPLHSTLSLEEQDRVF 473
D+LIFM+G +I + QE Y++K +LP++S L + Q ++F
Sbjct: 565 DILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIF 624
Query: 474 HYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
RK I++TNIAETS+TI GIR+V+D G K Y+ + +L ISKA+A+
Sbjct: 625 QDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANAD 684
Query: 534 QRKGRAGRTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGD-VRKFP 591
QR GRAGRT PG YRLY+E+ + T PEI+R ++ + LL L + + D + KFP
Sbjct: 685 QRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFP 744
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
F++ PP + SS+ L GAID+ ++T LG ++ P+ L K+L+ D
Sbjct: 745 FIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDE 804
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+L++ ++LSV F R + + AR + D LT+LN +++W + + S
Sbjct: 805 MLTIVSMLSVPQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQW---RANNF-SSH 860
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVL 737
WC + ++ + +R Q +L
Sbjct: 861 WCNKHFVQYKSLVRARDIRDQLLTIL 886
Score = 229 (85.7 bits), Expect = 9.7e-70, Sum P(4) = 9.7e-70
Identities = 49/115 (42%), Positives = 74/115 (64%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF-----QRIAC 85
I+ T+ LPV + + +++ + + +VV+I G+TG GK+TQ+ QYL + G+ + I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKIVFITEGLLLRQ 139
TQPRR+A IS++KRVA E VGY IRFE E TK+ F+T+G+LLR+
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRE 457
Score = 165 (63.1 bits), Expect = 3.3e-28, Sum P(4) = 3.3e-28
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYST-PEIRRVSIDSLLLSLVCMGLGD-VRKFPFLEAPPA 866
RT PG YRLY+E+ + T PEI+R ++ + LL L + + D + KFPF++ PP
Sbjct: 692 RTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPL 751
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ SS+ L GAID+ ++T LG ++ P+ L K+L+ D ML +
Sbjct: 752 QTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTI 808
Score = 130 (50.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D+ L Y +++DE HER L+ D LLG K LL ++K+I+ SAT+N + F +F
Sbjct: 461 DDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNA 520
Query: 1179 AKDLLSGST 1187
+ + G T
Sbjct: 521 PQFTIPGRT 529
Score = 78 (32.5 bits), Expect = 9.7e-70, Sum P(4) = 9.7e-70
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D L Y +++DE HER L+ D LLG K LL
Sbjct: 461 DDTLDKYSCVIIDEAHERSLNTDILLGFFKILL 493
Score = 70 (29.7 bits), Expect = 6.6e-69, Sum P(4) = 6.6e-69
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLG 257
D+ L Y +I+DE HER L D LLG
Sbjct: 461 DDTLDKYSCVIIDEAHERSLNTDILLG 487
Score = 64 (27.6 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 596 PPAENIES--SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
P NI++ ++R+ Q I K+R+ + FLS ++ + ++ GS+ V
Sbjct: 200 PVIRNIDNDDALRNTVQLYPIPLKQRMEWIPPFLSKFALENKVPTSIIIGSISETSSQVS 259
Query: 654 SLAAVLSVQSP---FTNRAFRDPDCETARK-ELE--SNHGDPLTVLN-AYKEWLGVKKDR 706
+L+ V ++P F+ A R R+ +E D TVLN A E LG++ +
Sbjct: 260 ALSMVNPFRNPDSEFSANAKRGSKLVALRRINMEHIQQSRDNTTVLNTAMGEVLGLENNN 319
Query: 707 VRSKK 711
K
Sbjct: 320 KAKDK 324
Score = 53 (23.7 bits), Expect = 7.9e-17, Sum P(4) = 7.9e-17
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
GAID+ ++T LG ++ P+ L K+L+ D ML +
Sbjct: 765 GAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTI 808
Score = 53 (23.7 bits), Expect = 7.9e-17, Sum P(4) = 7.9e-17
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
GAID+ ++T LG ++ P+ L K+L+ D ML +
Sbjct: 765 GAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTI 808
Score = 53 (23.7 bits), Expect = 7.9e-17, Sum P(4) = 7.9e-17
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GAID+ ++T LG ++ P+ L K+L+ D ML +
Sbjct: 765 GAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTI 808
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 390 YHPIVELDRTKSEKLDPGPYIRILSIIDKK 419
++ ++EL + KSE+ GP +I I+K+
Sbjct: 62 FNELLELLKNKSEEDSTGPK-KIAPSINKR 90
Score = 38 (18.4 bits), Expect = 9.7e-70, Sum P(4) = 9.7e-70
Identities = 26/104 (25%), Positives = 43/104 (41%)
Query: 1188 ARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPD 1247
AR +D L IL S P ++ G ++ + +K+ + C GF H + T +
Sbjct: 875 ARDIRDQ--LLTILKSQKIPVISSGKDW---DIIKKCI--CS--GFA--HQAAKITGLRN 923
Query: 1248 VLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
+ + V P L G + +VY LL TSK ++
Sbjct: 924 YVHLKTGVSVQLHPTSALHG---LGDLPPYVVYHELLMTSKEYI 964
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 547 (197.6 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 136/426 (31%), Positives = 228/426 (53%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F + I
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVP-I 701
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
+PGR +P+ + + +T E + L + P GD+LIFM G
Sbjct: 702 FHIPGRTFPVDILF------SKTPQEDYVEAAVKQSLQVHLSGAP----GDILIFMPGQE 751
Query: 437 EIS----SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAET 492
+I IV +E E + VLP++S L + Q ++F AP+G+RKCIV+TNIAET
Sbjct: 752 DIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET 810
Query: 493 SITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYS 552
S+T+DGI FV+DSG K + S L+ I K G +G T P C RLY+
Sbjct: 811 SLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSPRCC-RLYT 869
Query: 553 EEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N+ +S+ L
Sbjct: 870 QSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWIL 929
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR 671
GA+D+ +TS GR + + P+D L KML+ +L + ++LSV + F R
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGR 989
Query: 672 DPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRS 731
+ + + R++ D L+ LN Y +W K+ S WC I + +V ++R+
Sbjct: 990 EEESDQIREKFAVPESDHLSYLNVYLQW----KNNNYSTIWCNDHFIHAKAMRKVREVRA 1045
Query: 732 QFKQVL 737
Q K ++
Sbjct: 1046 QLKDIM 1051
Score = 232 (86.7 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 55/147 (37%), Positives = 86/147 (58%)
Query: 4 ALYEEWKLLLRT---YLDFKQKE-----KFSTLMKIRETQNSLPVAQYKQEIIDTVLKER 55
+L E+ K+ RT + D +K+ +F+ I E + LP+ +QE++ +
Sbjct: 490 SLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNS 549
Query: 56 VVIIAGDTGCGKSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLV 112
+VI+ G+TG GK+TQ+ QYL + G+ I CTQPRR+A +S++KRV+ E V
Sbjct: 550 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 609
Query: 113 GYQIRFEKHRREKTKIVFITEGLLLRQ 139
GY IRFE E T I ++T+G+LLR+
Sbjct: 610 GYAIRFEDCTSESTLIKYMTDGILLRE 636
Score = 164 (62.8 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 40/124 (32%), Positives = 71/124 (57%)
Query: 810 TGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
T P C RLY++ Y + L + PEI+R ++ +++L L +G+ D+ +F F++ PP +N
Sbjct: 860 TSPRCC-RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDN 918
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
+ +S+ L GA+D+ +T+ GR + + P+D L KML+ +LL+ L+
Sbjct: 919 MLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLS 978
Query: 929 FGAI 932
AI
Sbjct: 979 VPAI 982
Score = 111 (44.1 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKD 1181
L Y +++DE HER L+ D L G+++ ++ +++K+I+ SAT++ E F ++F +
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIF 702
Query: 1182 LLSGST 1187
+ G T
Sbjct: 703 HIPGRT 708
Score = 69 (29.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 982
Score = 69 (29.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
GA+D+ +TS GR + + P+D L KML+ +LL+ L+ AI
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAI 982
Score = 67 (28.6 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER L+ D L G+++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLR 669
Score = 67 (28.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
GA+D+ +TS GR + + P+D L KML+
Sbjct: 930 GALDNTGGLTSTGRLMVEFPLDPALSKMLI 959
Score = 63 (27.2 bits), Expect = 5.5e-69, Sum P(3) = 5.5e-69
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L D L G++
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLL 668
Score = 47 (21.6 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 702 VKKDRVRSKKWCKRRGIEEQRFY-EVTKLRSQFKQVLGDSGLI 743
+KK S ++ K++ I EQR Y + ++ + ++ D+ ++
Sbjct: 509 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIV 551
Score = 37 (18.1 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 679 RKELESNHGDPLTVLNAYKEWLGVKKDR 706
R+E + + +++YK+W K D+
Sbjct: 62 REEKDDGEDKKKSRISSYKDWEESKDDQ 89
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 512 (185.3 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 120/349 (34%), Positives = 194/349 (55%)
Query: 400 KSEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAAQEYNEKSQG-WI 456
KS L+ + IDK+ + + G +LIF+ G+ EISS ++ E N+ S ++
Sbjct: 793 KSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIK---EINKSSDNKFM 849
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
LPLHS L+ EQ +F AP+G RK +VSTNIAETSITI V+D+GK K + +D
Sbjct: 850 ALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHK 909
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+ L E W S+A QR+GRAGR G CY LY++E + + + PEI+R +++L
Sbjct: 910 LNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLY 969
Query: 577 LSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDI 634
L + MG+ +V +F L+AP +++ + + L + GA+ +T LG ++S LP D
Sbjct: 970 LVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDP 1028
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLN 694
K+L+ G +F +D L+LAA+ S SPF N + + +K+ + GD +++ N
Sbjct: 1029 QSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMAN 1088
Query: 695 AYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLI 743
AY ++ K R ++ + I++ +T RSQ+ +L + G +
Sbjct: 1089 AYNAYMSNKSKRFLTENYLSYTTIKD-----ITSTRSQYLSLLVELGFV 1132
Score = 190 (71.9 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 48/136 (35%), Positives = 78/136 (57%)
Query: 10 KLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKE-RVVIIAGDTGCGKS 68
+L+ +Y K ++F ++ R + LP A KQE + T + +V +I G+TG GKS
Sbjct: 548 ELVKESYKKRKHSDEFKEMLIQR---SKLP-AFAKQESLMTAINSGQVTLITGETGSGKS 603
Query: 69 TQIPQYLV-----QAGFQ-RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR 122
TQ+ Q+++ + F +I CTQPRR++ +SL+ R++ E + + + GY IR E
Sbjct: 604 TQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKT 663
Query: 123 REKTKIVFITEGLLLR 138
T+I F T G+LLR
Sbjct: 664 SSNTRITFATTGVLLR 679
Score = 171 (65.3 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G CY LY++E + + + PEI+R +++L L + MG+ +V +F L+AP
Sbjct: 934 RVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDK 993
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+++ + + L + GA+ +T LG ++S LP D K+L+ G +F +D L L
Sbjct: 994 SSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 927 LNFGA--IDSKER 937
+ G+ I+S E+
Sbjct: 1053 SSTGSPFINSYEQ 1065
Score = 153 (58.9 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 299 GVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMS 358
GV+ +L S+ + + L + +++DE+HER + DFLL ++K ++ S ++KIIL+S
Sbjct: 675 GVLLRMLQSSKK---NGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLS 731
Query: 359 ATINIELFHTYFNRIAKIIKVPGRLYPIQ 387
ATI+++ F +F + + + GR YPIQ
Sbjct: 732 ATISVDTFINFFEKPLTPLHIEGRTYPIQ 760
Score = 123 (48.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 1112 KQVQVAADN-FLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIEL 1170
+ +Q + N L + +++DE+HER + DFLL ++K ++ S ++KIIL+SATI+++
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDT 738
Query: 1171 FHTYFNRIAKDL-LSGST 1187
F +F + L + G T
Sbjct: 739 FINFFEKPLTPLHIEGRT 756
Score = 72 (30.4 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA--IDSKER 987
GA+ +T LG ++S LP D K+L+ G +F +D L L + G+ I+S E+
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQ 1065
Score = 72 (30.4 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA--IDSKER 1037
GA+ +T LG ++S LP D K+L+ G +F +D L L + G+ I+S E+
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQ 1065
Score = 70 (29.7 bits), Expect = 5.5e-22, Sum P(4) = 5.5e-22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA+ +T LG ++S LP D K+L+ G +F +D L L
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTL 1049
Score = 66 (28.3 bits), Expect = 2.7e-60, Sum P(4) = 2.7e-60
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
L + +++DE+HER + DFLL ++K ++ S
Sbjct: 690 LKNIGYILIDEVHERSVDADFLLILLKKMIKS 721
Score = 59 (25.8 bits), Expect = 1.4e-59, Sum P(4) = 1.4e-59
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 224 KQVQVATDN-FLSSYDILILDEVHERHLYGDFLL 256
+ +Q + N L + +++DEVHER + DFLL
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLL 712
Score = 43 (20.2 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1183 LSGSTARSHKDVTILKVILASGLYPQVA 1210
L S ++ ++ +++ I+A YPQVA
Sbjct: 1136 LDDSCNKNAENWPLIRGIIAGAFYPQVA 1163
Score = 37 (18.1 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 275 FLSSYDVLVLDEIHERHLHGD 295
F+S D+ ++ E +++ H D
Sbjct: 541 FISDKDIELVKESYKKRKHSD 561
Score = 37 (18.1 bits), Expect = 2.5e-42, Sum P(3) = 2.5e-42
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 316 FLSSYDVLVLDEIHERHLHGD 336
F+S D+ ++ E +++ H D
Sbjct: 541 FISDKDIELVKESYKKRKHSD 561
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 512 (185.3 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 120/349 (34%), Positives = 194/349 (55%)
Query: 400 KSEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAAQEYNEKSQG-WI 456
KS L+ + IDK+ + + G +LIF+ G+ EISS ++ E N+ S ++
Sbjct: 793 KSGNLNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIK---EINKSSDNKFM 849
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
LPLHS L+ EQ +F AP+G RK +VSTNIAETSITI V+D+GK K + +D
Sbjct: 850 ALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHK 909
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+ L E W S+A QR+GRAGR G CY LY++E + + + PEI+R +++L
Sbjct: 910 LNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLY 969
Query: 577 LSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDI 634
L + MG+ +V +F L+AP +++ + + L + GA+ +T LG ++S LP D
Sbjct: 970 LVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDP 1028
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLN 694
K+L+ G +F +D L+LAA+ S SPF N + + +K+ + GD +++ N
Sbjct: 1029 QSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMAN 1088
Query: 695 AYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLI 743
AY ++ K R ++ + I++ +T RSQ+ +L + G +
Sbjct: 1089 AYNAYMSNKSKRFLTENYLSYTTIKD-----ITSTRSQYLSLLVELGFV 1132
Score = 190 (71.9 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 48/136 (35%), Positives = 78/136 (57%)
Query: 10 KLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKE-RVVIIAGDTGCGKS 68
+L+ +Y K ++F ++ R + LP A KQE + T + +V +I G+TG GKS
Sbjct: 548 ELVKESYKKRKHSDEFKEMLIQR---SKLP-AFAKQESLMTAINSGQVTLITGETGSGKS 603
Query: 69 TQIPQYLV-----QAGFQ-RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR 122
TQ+ Q+++ + F +I CTQPRR++ +SL+ R++ E + + + GY IR E
Sbjct: 604 TQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKT 663
Query: 123 REKTKIVFITEGLLLR 138
T+I F T G+LLR
Sbjct: 664 SSNTRITFATTGVLLR 679
Score = 171 (65.3 bits), Expect = 2.6e-32, Sum P(4) = 2.6e-32
Identities = 41/133 (30%), Positives = 73/133 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G CY LY++E + + + PEI+R +++L L + MG+ +V +F L+AP
Sbjct: 934 RVTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDK 993
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+++ + + L + GA+ +T LG ++S LP D K+L+ G +F +D L L
Sbjct: 994 SSLDKANQFLHEIGALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 927 LNFGA--IDSKER 937
+ G+ I+S E+
Sbjct: 1053 SSTGSPFINSYEQ 1065
Score = 153 (58.9 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 299 GVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMS 358
GV+ +L S+ + + L + +++DE+HER + DFLL ++K ++ S ++KIIL+S
Sbjct: 675 GVLLRMLQSSKK---NGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLS 731
Query: 359 ATINIELFHTYFNRIAKIIKVPGRLYPIQ 387
ATI+++ F +F + + + GR YPIQ
Sbjct: 732 ATISVDTFINFFEKPLTPLHIEGRTYPIQ 760
Score = 123 (48.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 1112 KQVQVAADN-FLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIEL 1170
+ +Q + N L + +++DE+HER + DFLL ++K ++ S ++KIIL+SATI+++
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDT 738
Query: 1171 FHTYFNRIAKDL-LSGST 1187
F +F + L + G T
Sbjct: 739 FINFFEKPLTPLHIEGRT 756
Score = 72 (30.4 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA--IDSKER 987
GA+ +T LG ++S LP D K+L+ G +F +D L L + G+ I+S E+
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQ 1065
Score = 72 (30.4 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA--IDSKER 1037
GA+ +T LG ++S LP D K+L+ G +F +D L L + G+ I+S E+
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQ 1065
Score = 70 (29.7 bits), Expect = 5.5e-22, Sum P(4) = 5.5e-22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
GA+ +T LG ++S LP D K+L+ G +F +D L L
Sbjct: 1007 GALQENS-LTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTL 1049
Score = 66 (28.3 bits), Expect = 2.7e-60, Sum P(4) = 2.7e-60
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
L + +++DE+HER + DFLL ++K ++ S
Sbjct: 690 LKNIGYILIDEVHERSVDADFLLILLKKMIKS 721
Score = 59 (25.8 bits), Expect = 1.4e-59, Sum P(4) = 1.4e-59
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 224 KQVQVATDN-FLSSYDILILDEVHERHLYGDFLL 256
+ +Q + N L + +++DEVHER + DFLL
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLL 712
Score = 43 (20.2 bits), Expect = 2.3e-69, Sum P(4) = 2.3e-69
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1183 LSGSTARSHKDVTILKVILASGLYPQVA 1210
L S ++ ++ +++ I+A YPQVA
Sbjct: 1136 LDDSCNKNAENWPLIRGIIAGAFYPQVA 1163
Score = 37 (18.1 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 275 FLSSYDVLVLDEIHERHLHGD 295
F+S D+ ++ E +++ H D
Sbjct: 541 FISDKDIELVKESYKKRKHSD 561
Score = 37 (18.1 bits), Expect = 2.5e-42, Sum P(3) = 2.5e-42
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 316 FLSSYDVLVLDEIHERHLHGD 336
F+S D+ ++ E +++ H D
Sbjct: 541 FISDKDIELVKESYKKRKHSD 561
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 533 (192.7 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 163/557 (29%), Positives = 279/557 (50%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHER 290
D L+ +I+DEVHER + DFLL ++ L ++ L S V D+
Sbjct: 689 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDL---HLILMSATV-DSDKFSTY 744
Query: 291 HLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK--C--LL 346
H C + + ++ ++ +V L++I E F+L C L
Sbjct: 745 FTH---------CPI---LRISGRSY--PVEVFHLEDIVEET---GFVLEKDSEYCQKFL 787
Query: 347 HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY-----HPIVELDRTKS 401
E+ I + S ++ + Y I L P +Y H I+ ++
Sbjct: 788 EEEEEITINVTSKAGGVKKYQEY---IPVQSGASPELNPFYQKYSSRTQHAILYMN---P 841
Query: 402 EKLDPGPYIRILSIIDKKYP-RTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLP 459
K++ + +L +DK R G VLIF+ G++ I + + + S+ + V+
Sbjct: 842 HKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIA 901
Query: 460 LHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKM 519
LHS LS ++Q F + P G+RK +++TNIAET ITI + FV+D+G+ KE Y +++M
Sbjct: 902 LHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQM 961
Query: 520 STLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSL 579
S+L E ++SKASA QR+GRAGR G C+RLY+ E++ +YS PEI RV ++ L L +
Sbjct: 962 SSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHI 1021
Query: 580 VCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPL 636
+ LG F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++ +
Sbjct: 1022 MKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKI 1081
Query: 637 GKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAY 696
GKML+FG++F ++ V +LAAV++ +SPF R + + A+ L D LT+ NAY
Sbjct: 1082 GKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAY 1141
Query: 697 KEWLGVKKDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLS 754
W +++ RS+ +C+R + + ++ + +++ +G + P
Sbjct: 1142 LGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSS---PSWEGR 1198
Query: 755 SRERALRHGEIKLLQAI 771
+ L +I LL+A+
Sbjct: 1199 KGPQTLSFQDIALLKAV 1215
Score = 244 (91.0 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 57/162 (35%), Positives = 95/162 (58%)
Query: 1 MSPALYEEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIA 60
+ P E+ + + + K+ L+K R+ LPV +++ I++T+ + RVV++A
Sbjct: 537 LEPTSAEDLAPVRSLFRRLQSTPKYQRLLKERQ---QLPVFKHRDSIVETLKRHRVVVVA 593
Query: 61 GDTGCGKSTQIPQYLVQ------AGFQR--IACTQPRRIACISLSKRVAYETLSQY---- 108
G+TG GKSTQ+P +L++ G ++ I CTQPRRI+ +SL+ RV E +
Sbjct: 594 GETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGG 653
Query: 109 -SNLVGYQIRFEKHRREKTKIVFITEGLLLR--QDSGLITDI 147
++L GYQIR E E T++++ T G+LLR Q+ GL+ D+
Sbjct: 654 RNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADV 695
Score = 189 (71.6 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 44/138 (31%), Positives = 77/138 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+RLY+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 983 RVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQL 1042
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L
Sbjct: 1043 QVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAA 1102
Query: 926 ALNFGAIDSKERVTSLGR 943
+ + +T +GR
Sbjct: 1103 VMT----EKSPFITPIGR 1116
Score = 129 (50.5 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L+ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ + F TYF
Sbjct: 689 DGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHC 748
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 749 PILRISG 755
Score = 96 (38.9 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 981
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L +
Sbjct: 1049 MNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMT--- 1105
Query: 982 IDSKERVTSLGR 993
+ +T +GR
Sbjct: 1106 -EKSPFITPIGR 1116
Score = 96 (38.9 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 1031
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L +
Sbjct: 1049 MNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMT--- 1105
Query: 1032 IDSKERVTSLGR 1043
+ +T +GR
Sbjct: 1106 -EKSPFITPIGR 1116
Score = 94 (38.1 bits), Expect = 9.7e-22, Sum P(3) = 9.7e-22
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F ++ + L
Sbjct: 1049 MNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATL 1100
Score = 66 (28.3 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 1185 GSTARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
G S +D+ +LK +LA+GLY V I + T K A +G +HP SV
Sbjct: 1200 GPQTLSFQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSV 1257
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
R S ++Q++ S+L T P ++ ++L ++ T +VF
Sbjct: 890 RRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVF 943
Score = 38 (18.4 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 390 YHPIVELDRTKSEKLDPGP 408
++P +++ ++EK P P
Sbjct: 311 FNPAIKISHQQNEKKKPAP 329
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 483 (175.1 bits), Expect = 1.5e-68, Sum P(5) = 1.5e-68
Identities = 119/340 (35%), Positives = 188/340 (55%)
Query: 424 ERGDVLIFMSGISEI----SSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
E G +LIF+ G EI I+ + + E + + V LHS + +Q +V P G
Sbjct: 620 EAGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAG 679
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
+RK I+STNIAETSIT++ + FV+DSGKVKE S+D ++ L+ WISKASA QRKGRA
Sbjct: 680 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRA 739
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFL 593
GR PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P
Sbjct: 740 GRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAP-- 797
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
E PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 857
Query: 654 SLAAVLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSK 710
++A L+ + PF +A + RK + D + +L A++ W + D +
Sbjct: 858 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWE-R 916
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+C++ + + + +R+Q L SG + G D
Sbjct: 917 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD 956
Score = 237 (88.5 bits), Expect = 1.5e-68, Sum P(5) = 1.5e-68
Identities = 49/109 (44%), Positives = 72/109 (66%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + ++EI+ + + +VV+I G+TG GK+TQIPQ+L+ F+ RI CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R+A I++++RVA E + +GYQIR E KT + F T G+LLR
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 297
Score = 168 (64.2 bits), Expect = 1.4e-34, Sum P(5) = 1.4e-34
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLE 862
R PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E
Sbjct: 741 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCAIADFLMKAP--E 798
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 799 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 858
Query: 923 LDLALNF 929
+ L +
Sbjct: 859 IACTLAY 865
Score = 126 (49.4 bits), Expect = 1.5e-68, Sum P(5) = 1.5e-68
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 360 GS-CPVIYIQGRPFEVK 375
Score = 116 (45.9 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 78 (32.5 bits), Expect = 1.9e-25, Sum P(5) = 1.9e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 78 (32.5 bits), Expect = 7.2e-25, Sum P(6) = 7.2e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 78 (32.5 bits), Expect = 7.2e-25, Sum P(6) = 7.2e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 75 (31.5 bits), Expect = 3.0e-63, Sum P(5) = 3.0e-63
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
++A D LS+ +++DE+HER DFLL ++ LL H T+++
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKL 343
Score = 71 (30.1 bits), Expect = 7.8e-63, Sum P(5) = 7.8e-63
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLL 328
Score = 52 (23.4 bits), Expect = 1.5e-68, Sum P(5) = 1.5e-68
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRI 1251
++K L +G+YP + D N L K+K V HP SV SQP +I
Sbjct: 969 VVKAALVAGMYPHLVHVDRENV------VLAGPKEKK-VRFHPTSVL-SQPQYKKI 1016
Score = 44 (20.5 bits), Expect = 4.9e-22, Sum P(5) = 4.9e-22
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 1017 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDL 1075
+D + +L FG +D V + G SDL D L K ++D L++ L
Sbjct: 555 VDLLESYSASLEFGNLDESSLVQTSG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 1076 ALNFVH 1081
N H
Sbjct: 612 LYNICH 617
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 600 NIESSVRSLTQHGAIDSKERVTSL 623
N + +VRSL Q + +KER L
Sbjct: 121 NTKHAVRSLIQRFPVTNKERTELL 144
Score = 41 (19.5 bits), Expect = 1.5e-68, Sum P(5) = 1.5e-68
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 1312 TNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSA-THLAYSIRRLLA 1370
T ++ L D W+ + + A + Q HSL ++ S + + + R +
Sbjct: 1097 TTANLATLKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAII 1156
Query: 1371 ADLKTMYRRTGAE--SGVPGSNP 1391
A L T + G + SG+ G P
Sbjct: 1157 AVLSTEEQSAGLQQPSGI-GQRP 1178
Score = 37 (18.1 bits), Expect = 7.2e-25, Sum P(6) = 7.2e-25
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 917 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDL 975
+D + +L FG +D V + G SDL D L K ++D L++ L
Sbjct: 555 VDLLESYSASLEFGNLDESSLVQTSG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 976 ALN 978
N
Sbjct: 612 LYN 614
Score = 37 (18.1 bits), Expect = 7.2e-25, Sum P(6) = 7.2e-25
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 967 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDL 1025
+D + +L FG +D V + G SDL D L K ++D L++ L
Sbjct: 555 VDLLESYSASLEFGNLDESSLVQTSG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 1026 ALN 1028
N
Sbjct: 612 LYN 614
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 524 (189.5 bits), Expect = 1.8e-68, Sum P(4) = 1.8e-68
Identities = 131/396 (33%), Positives = 214/396 (54%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIELFHTYFNR 372
L Y +++DE HER LH D L+ +++ E +++I+MSAT+ E F +YFN
Sbjct: 272 LDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNN 331
Query: 373 IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR-TE-RG-DVL 429
AK++ V GR +PI++ +H +++++ S Y+ ++I KY TE +G D+L
Sbjct: 332 -AKVVLVAGRTFPIEV-FHVNPKINKSFSST----DYV-YNAVICVKYVHLTEPKGRDIL 384
Query: 430 IFMSGISEISSIVRAAQEYN----EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
+F++G EI ++ E N + + +PL++ L E+Q F P+G RK I+
Sbjct: 385 VFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVII 444
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
STNIAETS+TI GIR V+DSGKVK ++ ++ L+ +SKA A+QR GRAGR PG
Sbjct: 445 STNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPG 504
Query: 546 VCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSV 605
CYRLYS E + + PEI R ++ + L L+ +G+ + + ++ P +NI +++
Sbjct: 505 KCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAAL 564
Query: 606 RSLTQHGAI-----D-SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVL 659
LT GAI D SK +T +G P+ ++L I + + A +
Sbjct: 565 LELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAM 624
Query: 660 SVQSPFTNR--AFRDPDCETARKELESNHGDPLTVL 693
+ F+ + D D + R+ E+ GD +T+L
Sbjct: 625 QTDALFSGAGDSKSDADVDRIRRRFETREGDHITLL 660
Score = 227 (85.0 bits), Expect = 1.8e-68, Sum P(4) = 1.8e-68
Identities = 46/105 (43%), Positives = 69/105 (65%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACTQPRRIACI 94
LP+ +Q+++ + + +I+ G+TG GKSTQ+PQ V+AG IA TQPRR+A I
Sbjct: 161 LPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAI 220
Query: 95 SLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
SL+ RVA E + +VGY +RFE KTKI ++T+G++LR+
Sbjct: 221 SLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRK 265
Score = 130 (50.8 bits), Expect = 6.9e-25, Sum P(3) = 6.9e-25
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG CYRLYS E + + PEI R ++ + L L+ +G+ + + ++ P +N
Sbjct: 500 RDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDN 559
Query: 869 IESSVRSLTQHGAI-----D-SKERVTTLGRFLSDLPVDIPLGKMLVF-----GSMFHQI 917
I +++ LT GAI D SK +T +G P+ P ++F G + I
Sbjct: 560 INAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLP-PDHARILFQAQKEGCIMEAI 618
Query: 918 DTMLLLDL-ALNFGAIDSKER--VTSLGRFLSDLPVD-IPLGKM-LVFGSMFHQID 968
+ + AL GA DSK V + R D I L K+ LV F Q++
Sbjct: 619 KIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLN 674
Score = 119 (46.9 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIELFHTYFNR 1177
L Y +++DE HER LH D L+ +++ E +++I+MSAT+ E F +YFN
Sbjct: 272 LDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNN 331
Query: 1178 IAKDLLSGST 1187
L++G T
Sbjct: 332 AKVVLVAGRT 341
Score = 70 (29.7 bits), Expect = 1.8e-68, Sum P(4) = 1.8e-68
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK 302
L Y +++DE HER LH D L+ +++
Sbjct: 272 LDKYSCVIIDEAHERSLHSDVLMCILR 298
Score = 64 (27.6 bits), Expect = 7.4e-68, Sum P(4) = 7.4e-68
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y +I+DE HER L+ D L+ ++
Sbjct: 272 LDKYSCVIIDEAHERSLHSDVLMCIL 297
Score = 43 (20.2 bits), Expect = 1.8e-68, Sum P(4) = 1.8e-68
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 710 KKWCKRRGIEEQRFYEVTKLRSQFKQV 736
+K+C I EQ + + Q KQ+
Sbjct: 699 RKFCNDNMINEQHLKTASMIEEQLKQI 725
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 536 (193.7 bits), Expect = 2.8e-68, Sum P(4) = 2.8e-68
Identities = 170/559 (30%), Positives = 281/559 (50%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHER 290
D L++ +I+DEVHER + DFLL ++ L ++ L S V D E+
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL---HLILMSATV---DS--EK 738
Query: 291 HLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK--C--LL 346
F C + + ++ ++ +V L++I E F+L C L
Sbjct: 739 -----FSTYFTHCPI---LRISGRSY--PVEVFHLEDIIEET---GFVLEKDSEYCQKFL 785
Query: 347 HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY-----HPIVELDRTKS 401
E+ I + S I+ + Y I L P +Y H I+ ++ K
Sbjct: 786 EEEEEITINVTSKAGGIKKYQEY---IPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKI 842
Query: 402 EKLDPG-PYIRILSIIDK--KYPRTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIV 457
LD + L I D+ ++ E G VLIF+ G++ I + + + S+ + V
Sbjct: 843 N-LDLILELLTYLEITDRSPQFKNVE-GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKV 900
Query: 458 LPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTA 517
+ LHS LS ++Q F P+G+RK +++TNIAET ITI + FV+D+G+ KE Y ++
Sbjct: 901 IALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESS 960
Query: 518 KMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLL 577
+MS+L E ++SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L
Sbjct: 961 QMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCL 1020
Query: 578 SLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDI 634
++ LG F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++
Sbjct: 1021 HIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNV 1080
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLN 694
+GKML+FG++F +D V +LAAV++ +SPFT R + + A+ L D LT+ N
Sbjct: 1081 KIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYN 1140
Query: 695 AYKEWLGVKKDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDAS 752
AY W +++ RS+ +C+R + + +++ F + +
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETIAIQYFYRFYSIKTYY 1200
Query: 753 LSSRERALRHGEIKLLQAI 771
SS + L EI LL+A+
Sbjct: 1201 SSSASQTLSFQEIALLKAV 1219
Score = 239 (89.2 bits), Expect = 2.8e-68, Sum P(4) = 2.8e-68
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 189 (71.6 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 41/118 (34%), Positives = 70/118 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1044 QVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 132 (51.5 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 95 (38.5 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 74 (31.1 bits), Expect = 2.8e-68, Sum P(4) = 2.8e-68
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 1156 EVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVA-IGDE 1214
E+K+ TI I+ F+ +++ S S S +++ +LK +L +GLY V I
Sbjct: 1176 EIKVSFPE-TIAIQYFYRFYSIKTYYSSSASQTLSFQEIALLKAVLTAGLYDNVGKIIYT 1234
Query: 1215 FNTSETVKEALFHCKDKGFVSLHPFSV 1241
+ T K A +G +HP SV
Sbjct: 1235 KSVDVTEKLACIVETAQGKAQVHPSSV 1261
Score = 70 (29.7 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 1034 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN----FVHH-SXXXXX 1088
++ ++T LG+ L+ LPV++ +GKML+FG++F +D + L + F
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEA 1121
Query: 1089 XXAGERLESMDANEVEF--------RLKHDP---KQVQVAADNFLSSYDVLVLDEI 1133
A L D++ + + + + ++ NFL+ +L L+EI
Sbjct: 1122 DLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEI 1177
Score = 37 (18.1 bits), Expect = 2.8e-68, Sum P(4) = 2.8e-68
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKST 1337
L+Y + ++ +L + ++LLF I L D WI P++ A
Sbjct: 1271 LLYQEKIRYARVYLRETTLITPF-SVLLFGGDIEVQHRERLLSVDGWIYFQAPVKIAVIF 1329
Query: 1338 ADVNQLEHSLTR 1349
+ L S+ R
Sbjct: 1330 KQLRVLIDSVLR 1341
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 476 (172.6 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 117/340 (34%), Positives = 188/340 (55%)
Query: 424 ERGDVLIFMSGISEI----SSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
+ G +LIF+ G EI I+ + + + + + V LHS + +Q +V P G
Sbjct: 620 DAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAG 679
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
+RK I+STNIAETSIT++ + FV+DSGKVKE S+D ++ L+ WISKASA QRKGRA
Sbjct: 680 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRA 739
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFL 593
GR PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P
Sbjct: 740 GRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP-- 797
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
E PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 857
Query: 654 SLAAVLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSK 710
++A L+ + PF +A + RK + D + +L A++ W + D +
Sbjct: 858 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWE-R 916
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+C++ + + + +R+Q L SG + G D
Sbjct: 917 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD 956
Score = 237 (88.5 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 49/109 (44%), Positives = 72/109 (66%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + ++EI+ + + +VV+I G+TG GK+TQIPQ+L+ F+ RI CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R+A I++++RVA E + +GYQIR E KT + F T G+LLR
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 297
Score = 166 (63.5 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLE 862
R PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E
Sbjct: 741 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP--E 798
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 799 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 858
Query: 923 LDLALNF 929
+ L +
Sbjct: 859 IACTLAY 865
Score = 126 (49.4 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 360 GS-CPVIYIQGRPFEVK 375
Score = 116 (45.9 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 359
Score = 78 (32.5 bits), Expect = 9.4e-25, Sum P(5) = 9.4e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 78 (32.5 bits), Expect = 9.4e-25, Sum P(5) = 9.4e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 78 (32.5 bits), Expect = 9.4e-25, Sum P(5) = 9.4e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 817 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 865
Score = 75 (31.5 bits), Expect = 6.1e-63, Sum P(4) = 6.1e-63
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
++A D LS+ +++DE+HER DFLL ++ LL H T+++
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKL 343
Score = 71 (30.1 bits), Expect = 1.6e-62, Sum P(4) = 1.6e-62
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLL 328
Score = 42 (19.8 bits), Expect = 3.9e-21, Sum P(5) = 3.9e-21
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 1017 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDL 1075
+D + +L FG +D V + G SDL D L K ++D L++ L
Sbjct: 555 VDLLESYSASLEFGNLDESSLVHTNG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 611
Query: 1076 ALNFVH 1081
N H
Sbjct: 612 LYNICH 617
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 600 NIESSVRSLTQHGAIDSKERVTSL 623
N + +VRSL Q + +KER L
Sbjct: 121 NTKHAVRSLIQRFPVTNKERTELL 144
Score = 39 (18.8 bits), Expect = 3.0e-68, Sum P(4) = 3.0e-68
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1196 ILKVILASGLYPQVAIGDEFN 1216
++K L +G+YP + D N
Sbjct: 969 VVKAALVAGMYPNLVHVDREN 989
Score = 37 (18.1 bits), Expect = 1.1e-33, Sum P(5) = 1.1e-33
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 507 KVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLL 559
K K+ + STL E++ ++ + + + + RT P V E+Y LL
Sbjct: 395 KYKKEKQREEKQQSTLTEWYSAQENTFKPESQRQRTVPNVT------EEYDLL 441
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 551 (199.0 bits), Expect = 4.5e-68, Sum P(4) = 4.5e-68
Identities = 168/557 (30%), Positives = 282/557 (50%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHER 290
D LS+ +I+DEVHER + DFLL ++ L ++ L S V D E+
Sbjct: 690 DGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL---HLILMSATV---DS--EK 741
Query: 291 HLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK--C--LL 346
F C + + ++ ++ +V L++I E F+L C L
Sbjct: 742 -----FSTYFTHCPI---LRISGRSY--PVEVFHLEDIIEET---GFVLEKDSEYCQKFL 788
Query: 347 HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY-----HPIVELDRTKS 401
EV I + S I+ + Y I L P +Y H I+ ++
Sbjct: 789 EEEEEVTINVTSKAGGIKKYQEY---IPVQTGAHADLNPFYQKYSSRTQHAILYMN---P 842
Query: 402 EKLDPGPYIRILSIIDKKYP-RTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLP 459
K++ + +L+ +DK R G VLIF+ G++ I + + + S+ + V+
Sbjct: 843 HKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIA 902
Query: 460 LHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKM 519
LHS LS ++Q F P G+RK +++TNIAET ITI + FV+D+G+ KE Y +++M
Sbjct: 903 LHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQM 962
Query: 520 STLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSL 579
S+L E ++SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L +
Sbjct: 963 SSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHI 1022
Query: 580 VCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDIPL 636
+ LG F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++ +
Sbjct: 1023 MKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKI 1082
Query: 637 GKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAY 696
GKML+FG++F +D V +LAAV++ +SPFT R + + A+ L D LT+ NAY
Sbjct: 1083 GKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAY 1142
Query: 697 KEWLGVKKDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLS 754
W +++ RS+ +C+R + + ++ + +++ +G + +
Sbjct: 1143 LGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGN 1202
Query: 755 SRERALRHGEIKLLQAI 771
+ L EI LL+A+
Sbjct: 1203 RASQTLSFQEIALLKAV 1219
Score = 236 (88.1 bits), Expect = 4.5e-68, Sum P(4) = 4.5e-68
Identities = 52/144 (36%), Positives = 88/144 (61%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ- 77
F++ + K+ + + LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 553 FRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLED 612
Query: 78 -------AGFQRIACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREK 125
A I CTQPRRI+ +SL+ RV E + ++L GYQIR E E
Sbjct: 613 LLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACES 672
Query: 126 TKIVFITEGLLLR--QDSGLITDI 147
T++++ T G+LLR Q+ GL++++
Sbjct: 673 TRLLYCTTGVLLRKLQEDGLLSNV 696
Score = 189 (71.6 bits), Expect = 8.3e-29, Sum P(4) = 8.3e-29
Identities = 41/118 (34%), Positives = 70/118 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1044 QVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 135 (52.6 bits), Expect = 2.7e-23, Sum P(4) = 2.7e-23
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D LS+ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 690 DGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 749
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 750 PILRISG 756
Score = 97 (39.2 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 97 (39.2 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 97 (39.2 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 56 (24.8 bits), Expect = 4.5e-68, Sum P(4) = 4.5e-68
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 1186 STARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
S S +++ +LK +L +GLY V I + T K A +G +HP SV
Sbjct: 1205 SQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV 1261
Score = 41 (19.5 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 1268 RNVISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVF 1321
R S +++++ S+L T L P ++ ++L ++ T +VF
Sbjct: 891 RRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVF 944
Score = 40 (19.1 bits), Expect = 4.5e-68, Sum P(4) = 4.5e-68
Identities = 17/75 (22%), Positives = 28/75 (37%)
Query: 1275 HQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEA 1334
H L+Y + ++ +L + +LLF I L D WI P++ A
Sbjct: 1268 HGWLLYQEKIRYARVYLRETTLITPFP-VLLFGGDIEVQHRERLLSIDGWIYFQAPVKIA 1326
Query: 1335 KSTADVNQLEHSLTR 1349
+ L S+ R
Sbjct: 1327 VIFKQLRVLIDSVLR 1341
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 585 (211.0 bits), Expect = 7.6e-68, Sum P(4) = 7.6e-68
Identities = 152/421 (36%), Positives = 235/421 (55%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATIN 362
CLL ++ D LS +++DE HER L+ D LL ++K LL ++++++MSAT +
Sbjct: 407 CLLQHYMK---DRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATAD 463
Query: 363 IELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPG--PYIRILSIIDKKY 420
+ YF I+ V GR +P+++ Y P T+ + G Y+ + + +
Sbjct: 464 AKQLSQYFFSCG-ILLVNGRNFPVEIVYSP----SDTEENSVVGGIASYVGDVVKMAVEI 518
Query: 421 PRTER-GDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
+TE+ G +L F++ +E+ A + + S I LPLH LS EEQ RVF P G
Sbjct: 519 HKTEKEGTILAFLTSQAEVEW---ACERFITPSA--IALPLHGKLSFEEQFRVFQNHP-G 572
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK I +TNIAETS+TI G+++V+DSG VKE Y+ MS L+ +S++SA QR GRA
Sbjct: 573 RRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRA 632
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 599
GRT PG CYRLYS+ + + PEIRRV + LL ++ +G+ ++ +F F++AP E
Sbjct: 633 GRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPE 692
Query: 600 NIESSVRSLTQHGAIDSKERVTSL---GRFLSDLPVDIPLGKMLVFGSMFHQIDTV-LSL 655
I +V++L Q GA+ K V L G L L ++ LGK L+ G H++ + L
Sbjct: 693 AIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVL 751
Query: 656 AAVLS-VQSPFTNRAFRDPDCETARKELE--SNHGDPLTVLNAYKEWLGVKKDRVRSKKW 712
AAV++ S F D + R +++ + +GD T+L+ YKEW + ++R KW
Sbjct: 752 AAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRER--RNKW 809
Query: 713 C 713
C
Sbjct: 810 C 810
Score = 190 (71.9 bits), Expect = 7.6e-68, Sum P(4) = 7.6e-68
Identities = 38/111 (34%), Positives = 68/111 (61%)
Query: 32 RETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF---QRIACTQP 88
R ++ LP+ Y+++I+ + +E+++++ G+TG GKSTQ+ Q+L +G + I CTQP
Sbjct: 300 RRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQP 359
Query: 89 RRIACISLSKRVAYETLSQYS-NLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R+IA ++L+ RV E+ Y N V F +K+V++T+ LL+
Sbjct: 360 RKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQ 410
Score = 175 (66.7 bits), Expect = 8.0e-25, Sum P(4) = 8.0e-25
Identities = 42/112 (37%), Positives = 64/112 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS+ + + PEIRRV + LL ++ +G+ ++ +F F++AP E
Sbjct: 634 RTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEA 693
Query: 869 IESSVRSLTQHGAIDSKERVTTL---GRFLSDLPVDIPLGKMLVFGSMFHQI 917
I +V++L Q GA+ K V L G L L ++ LGK L+ G H++
Sbjct: 694 IAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRM 744
Score = 111 (44.1 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D LS +++DE HER L+ D LL ++K LL ++++++MSAT + + YF
Sbjct: 415 DRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSC 474
Query: 1179 AKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFN-TSETVKEAL-FHCKDKGFVSL 1236
L++G ++ + V S +G + + VK A+ H +K L
Sbjct: 475 GILLVNG------RNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTIL 528
Query: 1237 HPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMS 1282
+ TSQ +V E I P + LP +S + Q V+ +
Sbjct: 529 ---AFLTSQAEVEWACERFIT--PSAIALPLHGKLSFEEQFRVFQN 569
Score = 74 (31.1 bits), Expect = 8.0e-25, Sum P(4) = 8.0e-25
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
D LS +++DE HER L+ D LL ++K LL +++
Sbjct: 415 DRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDL 453
Score = 62 (26.9 bits), Expect = 7.6e-68, Sum P(4) = 7.6e-68
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS +I+DE HER L D LL ++
Sbjct: 415 DRSLSGISCVIIDEAHERSLNTDLLLALL 443
Score = 51 (23.0 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 388 LEYHPIVELDRTKSEKLDP 406
LEYHP++ +R K K +P
Sbjct: 1688 LEYHPLITCERYKKFKENP 1706
Score = 50 (22.7 bits), Expect = 7.6e-68, Sum P(4) = 7.6e-68
Identities = 24/102 (23%), Positives = 44/102 (43%)
Query: 1159 IILMSATINIELFHTYFNRIAKDL-LSGSTARSHKDVTILKVILASGLYPQ-VAIGDEFN 1216
+IL S N+ ++ T +N++ ++ L+G + H ++L A G P V G+ +
Sbjct: 863 VILASLAENVAMY-TGYNQLGYEVALTGQQVQLHPSCSLL----AFGQKPSWVVFGELLS 917
Query: 1217 TSETVKEALFHCKDKGFVSLHPFSVF-TSQPDVLRISEDDIV 1257
+ + C + L P F SQ D R+ +V
Sbjct: 918 IVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKKVV 959
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 476 (172.6 bits), Expect = 9.4e-68, Sum P(5) = 9.4e-68
Identities = 118/340 (34%), Positives = 188/340 (55%)
Query: 424 ERGDVLIFMSGISEI----SSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
+ G VLIF+ G EI I+ + + + + + V LHS + +Q +V P G
Sbjct: 621 DAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAG 680
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
+RK I+STNIAETSIT++ + FV+DSGKVKE S+D ++ L+ WISKASA QRKGRA
Sbjct: 681 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRA 740
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFL 593
GR PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P
Sbjct: 741 GRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP-- 798
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
E PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 858
Query: 654 SLAAVLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSK 710
++A L+ + PF +A + RK + D + +L A++ W + D +
Sbjct: 859 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWE-R 917
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+C++ + + + +R+Q L SG + G D
Sbjct: 918 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD 957
Score = 237 (88.5 bits), Expect = 9.4e-68, Sum P(5) = 9.4e-68
Identities = 49/109 (44%), Positives = 72/109 (66%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + ++EI+ + + +VV+I G+TG GK+TQIPQ+L+ F+ RI CTQPR
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 249
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R+A I++++RVA E + +GYQIR E KT + F T G+LLR
Sbjct: 250 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 298
Score = 166 (63.5 bits), Expect = 2.2e-34, Sum P(5) = 2.2e-34
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLE 862
R PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E
Sbjct: 742 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP--E 799
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 800 PPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 859
Query: 923 LDLALNF 929
+ L +
Sbjct: 860 IACTLAY 866
Score = 126 (49.4 bits), Expect = 9.4e-68, Sum P(5) = 9.4e-68
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 361 GS-CPVIYIQGRPFEVK 376
Score = 116 (45.9 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 78 (32.5 bits), Expect = 1.9e-25, Sum P(5) = 1.9e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 78 (32.5 bits), Expect = 1.9e-25, Sum P(5) = 1.9e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 78 (32.5 bits), Expect = 1.9e-25, Sum P(5) = 1.9e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 75 (31.5 bits), Expect = 1.8e-62, Sum P(5) = 1.8e-62
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
++A D LS+ +++DE+HER DFLL ++ LL H T+++
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKL 344
Score = 71 (30.1 bits), Expect = 4.7e-62, Sum P(5) = 4.7e-62
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLL 329
Score = 51 (23.0 bits), Expect = 9.4e-68, Sum P(5) = 9.4e-68
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRI 1251
++K L +G+YP + D N L K+K V HP SV SQP +I
Sbjct: 970 VVKAALVAGMYPNLVHVDRENL------VLTGPKEKK-VRFHPASVL-SQPQYKKI 1017
Score = 44 (20.5 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1191 HKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
HKD+ + L V++ ++ SET AL +GF S
Sbjct: 479 HKDIDAFAQVFHLILTENVSV--DYRHSETSATALMVAAGRGFAS 521
Score = 43 (20.2 bits), Expect = 6.2e-22, Sum P(5) = 6.2e-22
Identities = 31/122 (25%), Positives = 49/122 (40%)
Query: 965 HQIDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM-LVFGSMFHQIDTMLLL 1023
H + L +A G E++ S+G +++ G M L + F Q + + LL
Sbjct: 503 HSETSATALMVAAGRGFASQVEQLISMG---ANVHSKASNGWMALDWAKHFGQTEIVDLL 559
Query: 1024 D---LALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ L FG +D V + G SDL D L K ++D L++ L N
Sbjct: 560 ESYSATLEFGNLDESSLVQTNG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNI 616
Query: 1080 VH 1081
H
Sbjct: 617 CH 618
Score = 42 (19.8 bits), Expect = 9.4e-68, Sum P(5) = 9.4e-68
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 1312 TNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSA-THLAYSIRRLLA 1370
T ++ L D W+ + + A + Q HSL ++ S + + + R +
Sbjct: 1098 TTANLAALKLDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAII 1157
Query: 1371 ADLKTMYRRTGAE--SGVPGSNP 1391
A L T + G + SG+ G P
Sbjct: 1158 AVLSTEEQSAGLQQPSGI-GQRP 1179
Score = 42 (19.8 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 600 NIESSVRSLTQHGAIDSKERVTSL 623
N + +VRSL Q + +KER L
Sbjct: 122 NTKHAVRSLIQRFPVTNKERTELL 145
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 475 (172.3 bits), Expect = 1.7e-67, Sum P(5) = 1.7e-67
Identities = 117/340 (34%), Positives = 188/340 (55%)
Query: 424 ERGDVLIFMSGISEI----SSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
+ G +LIF+ G EI I+ + + + + + V LHS + +Q +V P G
Sbjct: 636 DAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAG 695
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
+RK I+STNIAETSIT++ + FV+DSGKVKE S+D ++ L+ WISKASA QRKGRA
Sbjct: 696 VRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRA 755
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFL 593
GR PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P
Sbjct: 756 GRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAP-- 813
Query: 594 EAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVL 653
E PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 814 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 873
Query: 654 SLAAVLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSK 710
++A L+ + PF +A + RK + D + +L A++ W + D +
Sbjct: 874 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWE-R 932
Query: 711 KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+C++ + + + +R+Q L SG + G D
Sbjct: 933 AFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD 972
Score = 237 (88.5 bits), Expect = 1.7e-67, Sum P(5) = 1.7e-67
Identities = 49/109 (44%), Positives = 72/109 (66%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + ++EI+ + + +VV+I G+TG GK+TQIPQ+L+ F+ RI CTQPR
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 264
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
R+A I++++RVA E + +GYQIR E KT + F T G+LLR
Sbjct: 265 RLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 313
Score = 166 (63.5 bits), Expect = 3.0e-34, Sum P(5) = 3.0e-34
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLE 862
R PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E
Sbjct: 757 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAP--E 814
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 815 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 874
Query: 923 LDLALNF 929
+ L +
Sbjct: 875 IACTLAY 881
Score = 126 (49.4 bits), Expect = 1.7e-67, Sum P(5) = 1.7e-67
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 375
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 376 GS-CPVIYIQGRPFEVK 391
Score = 116 (45.9 bits), Expect = 6.0e-21, Sum P(4) = 6.0e-21
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 375
Score = 78 (32.5 bits), Expect = 2.5e-25, Sum P(5) = 2.5e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 833 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 881
Score = 78 (32.5 bits), Expect = 2.5e-25, Sum P(5) = 2.5e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 833 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 881
Score = 78 (32.5 bits), Expect = 2.5e-25, Sum P(5) = 2.5e-25
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 833 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 881
Score = 75 (31.5 bits), Expect = 3.3e-62, Sum P(5) = 3.3e-62
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
++A D LS+ +++DE+HER DFLL ++ LL H T+++
Sbjct: 315 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKL 359
Score = 71 (30.1 bits), Expect = 8.5e-62, Sum P(5) = 8.5e-62
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLL 344
Score = 51 (23.0 bits), Expect = 1.7e-67, Sum P(5) = 1.7e-67
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 1196 ILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRI 1251
++K L +G+YP + D N T K+K V HP SV SQP +I
Sbjct: 985 VVKAALVAGMYPNLVHVDRENVILTGP------KEKK-VRFHPTSVL-SQPQYKKI 1032
Score = 45 (20.9 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 1191 HKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
HKDV + L V++ ++ SET AL +GF S
Sbjct: 494 HKDVDAFAQVFHLILTENVSV--DYRHSETSATALMVAAGRGFTS 536
Score = 44 (20.5 bits), Expect = 6.7e-22, Sum P(5) = 6.7e-22
Identities = 30/121 (24%), Positives = 49/121 (40%)
Query: 965 HQIDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKM-LVFGSMFHQIDTMLLL 1023
H + L +A G E++ S+G +++ G M L + F Q + + LL
Sbjct: 518 HSETSATALMVAAGRGFTSQVEQLISMG---ANVHSKASNGWMALDWAKHFGQTEIVDLL 574
Query: 1024 D---LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFV 1080
+ +L FG +D V + G LS D L K ++D L++ L N
Sbjct: 575 ESYSASLEFGNLDESSLVQTNGNDLS--AEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC 632
Query: 1081 H 1081
H
Sbjct: 633 H 633
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 600 NIESSVRSLTQHGAIDSKERVTSL 623
N + +VRSL Q + +KER L
Sbjct: 137 NTKHAVRSLIQRFPVTNKERTELL 160
Score = 41 (19.5 bits), Expect = 1.7e-67, Sum P(5) = 1.7e-67
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 1312 TNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSA-THLAYSIRRLLA 1370
T ++ L D W+ + + A + Q HSL ++ S + + + R +
Sbjct: 1113 TTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAII 1172
Query: 1371 ADLKTMYRRTGAE--SGVPGSNP 1391
A L T + G + SG+ G P
Sbjct: 1173 AVLSTEEQSAGLQQPSGI-GQRP 1194
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 540 (195.1 bits), Expect = 2.9e-67, Sum P(4) = 2.9e-67
Identities = 173/560 (30%), Positives = 286/560 (51%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHER 290
D L++ +I+DEVHER + DFLL ++ L ++ L S V D E+
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL---HLILMSATV---DS--EK 738
Query: 291 HLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK--C--LL 346
F C + + ++ ++ +V L++I E F+L C L
Sbjct: 739 -----FSTYFTHCPI---LRISGRSY--PVEVFHLEDIIEET---GFVLEKDSEYCQKFL 785
Query: 347 HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY-----HPIVELDRTKS 401
E+ I + S I+ + Y I L P +Y H I+ ++ K
Sbjct: 786 EEEEEITINVTSKAGGIKKYQEY---IPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKI 842
Query: 402 EKLDPG-PYIRILSIIDK--KYPRTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIV 457
LD + L I D+ ++ E G VLIF+ G++ I + + + S+ + V
Sbjct: 843 N-LDLILELLTYLEITDRSPQFKNVE-GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKV 900
Query: 458 LPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTA 517
+ LHS LS ++Q F P+G+RK +++TNIAET ITI + FV+D+G+ KE Y ++
Sbjct: 901 IALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESS 960
Query: 518 KMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLL 577
+MS+L E ++SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L
Sbjct: 961 QMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCL 1020
Query: 578 SLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDI 634
++ LG F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++
Sbjct: 1021 HIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNV 1080
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLN 694
+GKML+FG++F +D V +LAAV++ +SPFT R + + A+ L D LT+ N
Sbjct: 1081 KIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYN 1140
Query: 695 AYKEWLGVKKDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDAS 752
AY W +++ RS+ +C+R + + + R+ +++ ++ T I
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRRTTLLKLMNENAF-THIFIAFTF 1199
Query: 753 LSSR-ERALRHGEIKLLQAI 771
SSR + L EI LL+A+
Sbjct: 1200 YSSRASQTLSFQEIALLKAV 1219
Score = 239 (89.2 bits), Expect = 2.9e-67, Sum P(4) = 2.9e-67
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 189 (71.6 bits), Expect = 3.1e-29, Sum P(4) = 3.1e-29
Identities = 41/118 (34%), Positives = 70/118 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1044 QVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 132 (51.5 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 95 (38.5 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 60 (26.2 bits), Expect = 2.9e-67, Sum P(4) = 2.9e-67
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 1154 TAEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVA-IG 1212
T +K++ +A +I + T+++ A LS +++ +LK +L +GLY V I
Sbjct: 1179 TTLLKLMNENAFTHIFIAFTFYSSRASQTLS------FQEIALLKAVLTAGLYDNVGKII 1232
Query: 1213 DEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
+ T K A +G +HP SV
Sbjct: 1233 YTKSVDVTEKLACIVETAQGKAQVHPSSV 1261
Score = 37 (18.1 bits), Expect = 2.9e-67, Sum P(4) = 2.9e-67
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKST 1337
L+Y + ++ +L + ++LLF I L D WI P++ A
Sbjct: 1271 LLYQEKIRYARVYLRETTLITPF-SVLLFGGDIEVQHRERLLSVDGWIYFQAPVKIAVIF 1329
Query: 1338 ADVNQLEHSLTR 1349
+ L S+ R
Sbjct: 1330 KQLRVLIDSVLR 1341
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 541 (195.5 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 144/487 (29%), Positives = 258/487 (52%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHS---------TVEVAADNFLSSYDVLVLDEIHERH 332
LVLDE+HER + DFLL V+K L+ + V AD F + D + + R
Sbjct: 816 LVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAPVLNVPGRT 875
Query: 333 --LHGDFLLGVIKCLLHS----TAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPI 386
+ +FL ++ ++ + +++ + +E + + K +K G Y
Sbjct: 876 FPVQVNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKTELLKSLK--G--YST 931
Query: 387 QLEYHPIVELDRTKSEKLDPGPYIRILSII--DKKYPRTERGDVLIFMSGISEISSIVRA 444
+ + + ++D K +D ++++S I D Y + +L+F+ GI+EI ++
Sbjct: 932 RTR-NTLAQMDEYK---IDFDLIVQLISRIASDPNYQDYSKA-ILVFLPGIAEIRTLNDL 986
Query: 445 AQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVD 504
Q W+V PLHST++ EEQ+ F P G+RK +++TNIAET ITI + V+D
Sbjct: 987 LLGDRSFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVID 1046
Query: 505 SGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQY-SLLAEYS 563
+GK +EM +D +MS L + +IS+A+A+QR+GRAGR G+C+ ++++ ++ +++A+
Sbjct: 1047 TGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQ 1106
Query: 564 TPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVT 621
TPE+ R+S+ L + + +G + + L+ P A+NI ++ +L A+ E +T
Sbjct: 1107 TPEMLRLSLQDLAIRVKICKIGGIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLT 1166
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
LG L+ LP+D+ LGK+++ GS+F +D +++AA+LS +SPF + +T R
Sbjct: 1167 PLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFGQRSQADTVRLG 1226
Query: 682 LESNHGDPLTVLNAYKEW----LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
D LTV NAY W L + + ++C++ + +Q + L+ Q L
Sbjct: 1227 FRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSL 1286
Query: 738 GDSGLIT 744
DS ++
Sbjct: 1287 VDSKFLS 1293
Score = 222 (83.2 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 49/140 (35%), Positives = 83/140 (59%)
Query: 14 RTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQ 73
R + D ++ +++ R LP+ ++++++ V + +VVI+ G+TGCGKSTQ+P
Sbjct: 670 RIWYDKSSSPRYQNMLRSRM---QLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPS 726
Query: 74 YLV-----QAGFQRIACTQPRRIACISLSKRVAYET------LSQYSNLVGYQIRFEKHR 122
+L+ Q +I CT+PRRI+ ISL++RV+ E L +LVGY IR E +
Sbjct: 727 FLLEHQLAQGKACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANT 786
Query: 123 REKTKIVFITEGLLLRQDSG 142
+T++VF T G+++R G
Sbjct: 787 SRETRLVFATTGIVMRMLEG 806
Score = 164 (62.8 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 315 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIA 374
N L LVLDE+HER + DFLL V+K L+ ++K++LMSAT++ + F Y + A
Sbjct: 808 NDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDG-A 866
Query: 375 KIIKVPGRLYPIQLEY-HPIVEL 396
++ VPGR +P+Q+ + VEL
Sbjct: 867 PVLNVPGRTFPVQVNFLEDAVEL 889
Score = 158 (60.7 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 34/123 (27%), Positives = 72/123 (58%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G+C+ ++++ ++ +++A+ TPE+ R+S+ L + + +G + + L+ P
Sbjct: 1083 RVQQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLSKALDPPS 1142
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
A+NI ++ +L A+ E +T LG L+ LP+D+ LGK+++ GS+F +D + +
Sbjct: 1143 AKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAA 1202
Query: 926 ALN 928
L+
Sbjct: 1203 ILS 1205
Score = 122 (48.0 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 1120 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
N L LVLDE+HER + DFLL V+K L+ ++K++LMSAT++ + F Y +
Sbjct: 808 NDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLD 864
Score = 86 (35.3 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
+D ++ A+ E +T LG L+ LP+D+ LGK+++ GS+F +D + + L+
Sbjct: 1150 IDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILS 1205
Score = 86 (35.3 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
+D ++ A+ E +T LG L+ LP+D+ LGK+++ GS+F +D + + L+
Sbjct: 1150 IDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILS 1205
Score = 86 (35.3 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+D ++ A+ E +T LG L+ LP+D+ LGK+++ GS+F +D + + L+
Sbjct: 1150 IDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILS 1205
Score = 65 (27.9 bits), Expect = 6.7e-67, Sum P(3) = 6.7e-67
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 232 NFLSSYDILILDEVHERHLYGDFLLGVI 259
N L L+LDEVHER + DFLL V+
Sbjct: 808 NDLRDITHLVLDEVHERSIDSDFLLIVL 835
Score = 46 (21.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 475 YAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ P L + ++ E+ G+ SGK+ D+T K+ TLQE
Sbjct: 138 WLPPELMEQLLELIKGESRYAASGLASETSSGKMPSEE-DLTIKLWTLQE 186
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 556 (200.8 bits), Expect = 8.3e-67, Sum P(3) = 8.3e-67
Identities = 124/338 (36%), Positives = 196/338 (57%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEY----NEKSQGWIVLPLHSTLSLEEQD 470
I+D K+ G +L+F+ G++EI + Q N +S ++ PLHS+LS EEQ
Sbjct: 162 IVDGKHSYPP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQ 220
Query: 471 RVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKA 530
VF P G+ K I+STNIAETSITID + +V+DSGK+KE YD + M +L++ ++S+A
Sbjct: 221 AVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQA 280
Query: 531 SAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRK 589
+A QRKGRAGR GVC+ L++ Y+ L + PEI+RV ++ L L + + +
Sbjct: 281 NALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHN 340
Query: 590 FP-----FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
+E P +++ +S L GA+ ER+T LG L+ LPVD+ +GK+++FGS
Sbjct: 341 LQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGS 400
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKK 704
+F +D L++AA L+ +SPF + + + + E + D L +L AYK W K
Sbjct: 401 IFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTK 460
Query: 705 DRVR-SKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSG 741
+ VR S +C++ + + E+ L+ QF ++L D G
Sbjct: 461 EGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIG 498
Score = 176 (67.0 bits), Expect = 9.6e-19, Sum P(3) = 9.6e-19
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFP-----FLE 862
R GVC+ L++ Y+ L + PEI+RV ++ L L + + + +E
Sbjct: 291 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 350
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
P +++ +S L GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L
Sbjct: 351 PPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALT 410
Query: 923 LDLALNF 929
+ +L F
Sbjct: 411 IAASLAF 417
Score = 135 (52.6 bits), Expect = 8.3e-67, Sum P(3) = 8.3e-67
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 336 DFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPI-QLEYHPIV 394
DFLL V+K ++ +++ILMSAT+N ELF YFN +I +PGR +P+ Q +
Sbjct: 2 DFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNS-CPVITIPGRTFPVDQFFLEDAI 60
Query: 395 ELDRTKSEKLDPGPYIRILSIIDKKYPRTER 425
+ R + D PY+R + I K+ + R
Sbjct: 61 AVTRYVLQ--DGSPYMRSMKQISKEKLKARR 89
Score = 114 (45.2 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 928 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 366 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 417
Score = 114 (45.2 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 978 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 366 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 417
Score = 114 (45.2 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 1028 NFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
+ GA+ ER+T LG L+ LPVD+ +GK+++FGS+F +D L + +L F
Sbjct: 366 DLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 417
Score = 54 (24.1 bits), Expect = 8.3e-67, Sum P(3) = 8.3e-67
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 1269 NVISSKH---QLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSA-IHTN---SDFTRLVF 1321
NV+ +H L+Y ++TS+ F+ +C M ++ L+LF ++ +F +
Sbjct: 548 NVVQVRHFDSPYLLYHEKIKTSRVFIRDC-SMVSVYPLVLFGGGQVNVQLQRGEFVVSLD 606
Query: 1322 DSWIEVFV 1329
D WI FV
Sbjct: 607 DGWIR-FV 613
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 497 DG-IRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAE 533
DG IRFV S +V E+ ++ ++ L + I S +
Sbjct: 607 DGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSID 644
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 546 (197.3 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 140/446 (31%), Positives = 235/446 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 129 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 188
Query: 370 FNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKY 420
FN+ I+ V GR +P+ + Y D KS + +++ K
Sbjct: 189 FNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKST---------VETVV--KI 237
Query: 421 PRTER-GDVLIFMSGISEISSIV-------RAAQEYNEKSQGWIVLPLHSTLSLEEQDRV 472
+TE GDVL F++G E+ ++V RA K VLP+++ L EQ +V
Sbjct: 238 HQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH-LRVLPMYAGLPSFEQMKV 296
Query: 473 FHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASA 532
F +RK IV+TN+AETSITI GI +V+D G VK +Y+ + L +S+ASA
Sbjct: 297 FERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASA 356
Query: 533 EQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPF 592
QR GR GR+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F
Sbjct: 357 NQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 416
Query: 593 LEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
+ PPA+++ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 417 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 476
Query: 652 VLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKK 711
+LS+AA++ +Q+ F + ++ GD LT+LN Y+ ++ KD K
Sbjct: 477 ILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKD----SK 532
Query: 712 WCKRRGIEEQRFYEVTKLRSQFKQVL 737
WC+ + + +R Q K++L
Sbjct: 533 WCQEHFLNYKGLVRAATVREQLKKLL 558
Score = 164 (62.8 bits), Expect = 4.8e-18, Sum P(3) = 4.8e-18
Identities = 34/107 (31%), Positives = 63/107 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R+ G CYRLY+EE + L + + PE++R ++ ++L L +G+ +V +F F+ PPA++
Sbjct: 365 RSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQS 424
Query: 869 IESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSMF 914
+ ++ L G +D R+T LG +++ P++ KML+ F
Sbjct: 425 MVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNF 471
Score = 122 (48.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L+ Y V++LDE HER L+ D +G++K + ++++I+ SAT++ + F +
Sbjct: 129 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDF 188
Query: 1175 FNR 1177
FN+
Sbjct: 189 FNQ 191
Score = 115 (45.5 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 73 QYLVQAGFQR----IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRRE-KTK 127
+YL +AG+ + TQPRR+A ++++ RVA E + + VGY IRF+ + T+
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 128 IVFITEGLLLRQ 139
I F+T+G+L+R+
Sbjct: 118 IKFLTDGMLVRE 129
Score = 80 (33.2 bits), Expect = 2.3e-66, Sum P(3) = 2.3e-66
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
++ D L+ Y +++LDE HER LY D +G++
Sbjct: 129 EMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLL 161
Score = 77 (32.2 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L+ Y V++LDE HER L+ D +G++K
Sbjct: 133 DPLLTKYSVIMLDEAHERTLYTDIAIGLLK 162
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 1181 DLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS-LHPF 1239
D+ G + K L++I+AS D FN +ET A C P
Sbjct: 155 DIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPV 214
Query: 1240 SVFTSQ---PDVLRISEDDIV 1257
+F Q PD ++ + + +V
Sbjct: 215 DIFYLQSPVPDYIKSTVETVV 235
Score = 40 (19.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 440 SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDR---VFHYAPE 478
SI Q E S +V ++ LS+E+Q + VF Y E
Sbjct: 21 SISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKYLAE 62
Score = 40 (19.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 39 PVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIACTQPRRIACISLSK 98
PV Y + ++TV+K + GD G + Q V+ + Q R +A + +
Sbjct: 222 PVPDYIKSTVETVVK--IHQTEGD-GDVLAFLTGQEEVETVVSMLI-EQARALARTGMKR 277
Query: 99 RVAYETLSQYSNLVGY-QIR-FEKHRREKTKIVFIT 132
+ L Y+ L + Q++ FE+ R K++ T
Sbjct: 278 HL--RVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 311
Score = 38 (18.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 74 YLVQAGFQRIACTQPRR-IACI 94
Y++ GF ++ PR I C+
Sbjct: 325 YVIDCGFVKLRAYNPRTAIECL 346
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 449 (163.1 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 117/381 (30%), Positives = 198/381 (51%)
Query: 389 EYHPIVELDRTK-SEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAA 445
EY P +L ++ +EK P I L KY T G VL+F+ G + I ++ +
Sbjct: 618 EYGPETKLSMSQLNEKETPFELIEALL----KYIETLNVPGAVLVFLPGWNLIYTMQKHL 673
Query: 446 QEYNE-KSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVD 504
+ + S + +LPLHS + EEQ +VF P+G+ K I+STNIAETSITI+ + +V+D
Sbjct: 674 ENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVID 733
Query: 505 SGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYST 564
S K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L + T
Sbjct: 734 SCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMT 793
Query: 565 PEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTS 622
PE+ R + + LS+ + LG + +F +E PP + + + +L + A+D+ + +T
Sbjct: 794 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTP 853
Query: 623 LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKEL 682
LGR L+ LP++ GKM++ G +F+ D V +++A PF + R +
Sbjct: 854 LGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKR---LGYIHRNF 910
Query: 683 ESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDS 740
N D + +L+ ++ W + ++ ++C+++ + + + Q K++L +S
Sbjct: 911 AGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINS 970
Query: 741 G-----LITDI---PGPDASL 753
G L+T + GPD +L
Sbjct: 971 GFPEDCLLTQVFTNTGPDNNL 991
Score = 225 (84.3 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L + + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 361 EQISMDLKNELAY-QMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCG 419
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQY++ Q I TQPRRI+ +++++RVAYE + GY +RFE
Sbjct: 420 KTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFE 479
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 480 SILPRPHASIMFCTVGVLLRKLEAGI 505
Score = 179 (68.1 bits), Expect = 6.2e-37, Sum P(3) = 6.2e-37
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 770 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 829
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 830 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAA 889
Query: 927 LNF 929
F
Sbjct: 890 TCF 892
Score = 145 (56.1 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 511 VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN-CPIIEVYGR 569
Query: 383 LYPIQLEY 390
+P+Q EY
Sbjct: 570 TFPVQ-EY 576
Score = 117 (46.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 511 VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYF 558
Score = 91 (37.1 bits), Expect = 8.3e-28, Sum P(3) = 8.3e-28
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 844 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 892
Score = 91 (37.1 bits), Expect = 8.3e-28, Sum P(3) = 8.3e-28
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 844 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 892
Score = 91 (37.1 bits), Expect = 8.3e-28, Sum P(3) = 8.3e-28
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 844 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 892
Score = 65 (27.9 bits), Expect = 9.5e-58, Sum P(3) = 9.5e-58
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 511 VIVDEIHERDINTDFLLVVLRDVVLAYPEV 540
Score = 58 (25.5 bits), Expect = 5.2e-57, Sum P(3) = 5.2e-57
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 511 VIVDEIHERDINTDFLLVVL 530
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 471 (170.9 bits), Expect = 6.8e-66, Sum P(5) = 6.8e-66
Identities = 116/336 (34%), Positives = 186/336 (55%)
Query: 428 VLIFMSGISEI----SSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
+LIF+ G EI I+ + + + + + V LHS + +Q +V P G+RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAETSIT++ + FV+DSGKVKE S+D ++ L+ WISKASA QRKGRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCR 744
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLEAPP 597
PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E PP
Sbjct: 745 PGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP--EPPP 802
Query: 598 AENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAA 657
A + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L++A
Sbjct: 803 ALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIAC 862
Query: 658 VLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVRSKKWCK 714
L+ + PF +A + RK + D + +L A++ W + D + +C+
Sbjct: 863 TLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWE-RAFCE 921
Query: 715 RRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+ + + + +R+Q L SG + G D
Sbjct: 922 KNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD 957
Score = 236 (88.1 bits), Expect = 6.8e-66, Sum P(5) = 6.8e-66
Identities = 50/110 (45%), Positives = 73/110 (66%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + ++EI+ + + +VV+I G+TG GK+TQIPQ+L+ F+ RI CTQPR
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPR 248
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKIVFITEGLLLR 138
R+A I++++RVA E + +GYQIR E R KT + F T G+LLR
Sbjct: 249 RLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLR 298
Score = 166 (63.5 bits), Expect = 2.1e-32, Sum P(6) = 2.1e-32
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLVCMGLGD-VRKFPFLE 862
R PG+C+RL+S ++ + E+ TPE+ R+ + L LL+ V + D + K P E
Sbjct: 742 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP--E 799
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++V+ L A+D+ E +T LG L+DLPV+ LGKM++ + +D +L
Sbjct: 800 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILT 859
Query: 923 LDLALNF 929
+ L +
Sbjct: 860 IACTLAY 866
Score = 126 (49.4 bits), Expect = 6.8e-66, Sum P(5) = 6.8e-66
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 361 GS-CPVIYIQGRPFEVK 376
Score = 116 (45.9 bits), Expect = 9.9e-20, Sum P(4) = 9.9e-20
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ LL +K+IL SA +++ LF YF
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF 360
Score = 78 (32.5 bits), Expect = 1.4e-23, Sum P(6) = 1.4e-23
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 78 (32.5 bits), Expect = 1.4e-23, Sum P(6) = 1.4e-23
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 78 (32.5 bits), Expect = 1.4e-23, Sum P(6) = 1.4e-23
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ E +T LG L+DLPV+ LGKM++ + +D +L + L +
Sbjct: 818 AMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 866
Score = 75 (31.5 bits), Expect = 1.3e-60, Sum P(5) = 1.3e-60
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL--HSTVEV 311
++A D LS+ +++DE+HER DFLL ++ LL H T+++
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKL 344
Score = 71 (30.1 bits), Expect = 3.3e-60, Sum P(5) = 3.3e-60
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLL 329
Score = 42 (19.8 bits), Expect = 5.0e-20, Sum P(6) = 5.0e-20
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 1017 IDTMLLLDLALNFGAIDSKERVTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDL 1075
+D + +L FG +D V + G SDL D L K ++D L++ L
Sbjct: 556 VDLLESYSASLEFGNLDESSLVHTNG---SDLSAEDRELLKAYHHSFDDEKVDLDLIMHL 612
Query: 1076 ALNFVH 1081
N H
Sbjct: 613 LYNICH 618
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 600 NIESSVRSLTQHGAIDSKERVTSL 623
N + +VRSL Q + +KER L
Sbjct: 121 NTKHAVRSLIQRFPVTNKERTELL 144
Score = 41 (19.5 bits), Expect = 6.8e-66, Sum P(5) = 6.8e-66
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 1312 TNSDFTRLVFDSWIEVFVPLQEAKSTADVNQLEHSLTRDLVQFMSSA-THLAYSIRRLLA 1370
T ++ L D W+ + + A + Q HSL ++ S + + + R +
Sbjct: 1044 TTANLAALKLDEWLNFKLDPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAII 1103
Query: 1371 ADLKTMYRRTGAE--SGVPGSNP 1391
A L T + G + SG+ G P
Sbjct: 1104 AVLSTEEQSAGLQQPSGI-GQRP 1125
Score = 39 (18.8 bits), Expect = 6.8e-66, Sum P(5) = 6.8e-66
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1196 ILKVILASGLYPQVAIGDEFN 1216
++K L +G+YP + D N
Sbjct: 970 VVKAALVAGMYPNLVHVDREN 990
Score = 37 (18.1 bits), Expect = 2.1e-32, Sum P(6) = 2.1e-32
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 507 KVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLL 559
K K+ + STL E++ ++ + + + + RT P V E+Y LL
Sbjct: 396 KYKKEKQREEKQQSTLTEWYSAQENTFKPESQRQRTVPNVT------EEYDLL 442
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 450 (163.5 bits), Expect = 7.9e-66, Sum P(3) = 7.9e-66
Identities = 118/381 (30%), Positives = 198/381 (51%)
Query: 389 EYHPIVELDRTK-SEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAA 445
EY P +L ++ +EK P I L KY T G VL+F+ G + I ++ +
Sbjct: 617 EYGPETKLSMSQLNEKETPFELIEALL----KYIETLNVPGAVLVFLPGWNLIYTMQKHL 672
Query: 446 QEYNE-KSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVD 504
+ + S + +LPLHS + EEQ +VF P+G+ K I+STNIAETSITI+ + +V+D
Sbjct: 673 ENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVID 732
Query: 505 SGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYST 564
S K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L + T
Sbjct: 733 SCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMT 792
Query: 565 PEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTS 622
PE+ R + + LS+ + LG + +F +E PP + I + +L + A+D+ + +T
Sbjct: 793 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTP 852
Query: 623 LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKEL 682
LGR L+ LP++ GKM++ G +F+ D V +++A PF + R +
Sbjct: 853 LGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKR---LGYIHRNF 909
Query: 683 ESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDS 740
N D + +L+ ++ W + ++ ++C+++ + + + Q K++L +S
Sbjct: 910 AGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINS 969
Query: 741 G-----LITDI---PGPDASL 753
G L+T + GPD +L
Sbjct: 970 GFPEDCLLTQVFTNTGPDNNL 990
Score = 225 (84.3 bits), Expect = 7.9e-66, Sum P(3) = 7.9e-66
Identities = 53/146 (36%), Positives = 85/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L + + + LPV +++ EI++ + VVII G TGCG
Sbjct: 360 EQISMDLKNELTY-QMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCG 418
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQY++ Q I TQPRRI+ +++++RVAYE + GY +RFE
Sbjct: 419 KTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFE 478
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 479 SILPRPHASIMFCTVGVLLRKLEAGI 504
Score = 180 (68.4 bits), Expect = 9.1e-37, Sum P(3) = 9.1e-37
Identities = 38/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 769 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 828
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ I + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 829 DAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAA 888
Query: 927 LNF 929
F
Sbjct: 889 TCF 891
Score = 145 (56.1 bits), Expect = 7.9e-66, Sum P(3) = 7.9e-66
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN-CPIIEVYGR 568
Query: 383 LYPIQLEY 390
+P+Q EY
Sbjct: 569 TFPVQ-EY 575
Score = 117 (46.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYF 557
Score = 91 (37.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 843 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 891
Score = 91 (37.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 843 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 891
Score = 91 (37.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 843 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 891
Score = 65 (27.9 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVVLAYPEV 539
Score = 58 (25.5 bits), Expect = 1.0e-56, Sum P(3) = 1.0e-56
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 510 VIVDEIHERDINTDFLLVVL 529
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 447 (162.4 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 120/382 (31%), Positives = 195/382 (51%)
Query: 389 EYHPIVELDRTK-SEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAA 445
EY P L ++ +EK P I L KY T G VL+F+ G + I ++ +
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALL----KYIETLNVPGAVLVFLPGWNLIYTMQKHL 670
Query: 446 QEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVV 503
E N S + +LPLHS + EEQ +VF P G+ K I+STNIAETSITI+ + +V+
Sbjct: 671 -EMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVI 729
Query: 504 DSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYS 563
DS K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L +
Sbjct: 730 DSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHM 789
Query: 564 TPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVT 621
TPE+ R + + LS+ + LG + +F +E PP + + + +L + A+D+ + +T
Sbjct: 790 TPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 849
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
LGR L+ LP++ GKM++ G +F+ D + ++AA PF N R +
Sbjct: 850 PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKR---LGYIHRN 906
Query: 682 LESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGD 739
N D + +L+ ++ W + ++ ++C+ + + + + Q K++L +
Sbjct: 907 FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILIN 966
Query: 740 SG-----LITDI---PGPDASL 753
SG L+T + GPD +L
Sbjct: 967 SGFPEDCLLTQVFTNTGPDNNL 988
Score = 218 (81.8 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L I + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 358 EQISMDLKNELMY-QLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQ+++ Q I TQPRRI+ +S+++RVA+E + GY +RFE
Sbjct: 417 KTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFE 476
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 477 SILPRPHASIMFCTVGVLLRKLEAGI 502
Score = 177 (67.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 767 RVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 826
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 827 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAA 886
Query: 927 LNF 929
F
Sbjct: 887 TCF 889
Score = 153 (58.9 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 566
Query: 383 LYPIQLEY 390
YP+Q EY
Sbjct: 567 TYPVQ-EY 573
Score = 121 (47.7 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 555
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 68 (29.0 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 537
Score = 58 (25.5 bits), Expect = 7.3e-56, Sum P(3) = 7.3e-56
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 508 VIVDEIHERDINTDFLLVVL 527
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 447 (162.4 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 120/382 (31%), Positives = 195/382 (51%)
Query: 389 EYHPIVELDRTK-SEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAA 445
EY P L ++ +EK P I L KY T G VL+F+ G + I ++ +
Sbjct: 615 EYGPETRLSMSQLNEKETPFELIEALL----KYIETLNVPGAVLVFLPGWNLIYTMQKHL 670
Query: 446 QEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVV 503
E N S + +LPLHS + EEQ +VF P G+ K I+STNIAETSITI+ + +V+
Sbjct: 671 -EMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVI 729
Query: 504 DSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYS 563
DS K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L +
Sbjct: 730 DSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHM 789
Query: 564 TPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVT 621
TPE+ R + + LS+ + LG + +F +E PP + + + +L + A+D+ + +T
Sbjct: 790 TPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 849
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
LGR L+ LP++ GKM++ G +F+ D + ++AA PF N R +
Sbjct: 850 PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKR---LGYIHRN 906
Query: 682 LESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGD 739
N D + +L+ ++ W + ++ ++C+ + + + + Q K++L +
Sbjct: 907 FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILIN 966
Query: 740 SG-----LITDI---PGPDASL 753
SG L+T + GPD +L
Sbjct: 967 SGFPEDCLLTQVFTNTGPDNNL 988
Score = 218 (81.8 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L I + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 358 EQISMDLKNELMY-QLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQ+++ Q I TQPRRI+ +S+++RVA+E + GY +RFE
Sbjct: 417 KTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFE 476
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 477 SILPRPHASIMFCTVGVLLRKLEAGI 502
Score = 177 (67.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 767 RVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 826
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 827 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAA 886
Query: 927 LNF 929
F
Sbjct: 887 TCF 889
Score = 153 (58.9 bits), Expect = 8.4e-66, Sum P(3) = 8.4e-66
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 566
Query: 383 LYPIQLEY 390
YP+Q EY
Sbjct: 567 TYPVQ-EY 573
Score = 121 (47.7 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 555
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 89 (36.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 841 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCF 889
Score = 68 (29.0 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 508 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 537
Score = 58 (25.5 bits), Expect = 7.3e-56, Sum P(3) = 7.3e-56
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 508 VIVDEIHERDINTDFLLVVL 527
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 518 (187.4 bits), Expect = 9.0e-66, Sum P(3) = 9.0e-66
Identities = 128/410 (31%), Positives = 220/410 (53%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVA-ADNFLSSYDVLVLDEI 328
+++D+ L++Y +++DE HER ++ D LLG++ ++ E++ +D + ++++
Sbjct: 507 LSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSAT 566
Query: 329 HE--RHLHGDFLLGVIKCLLHSTA-EVKI-ILMSATINIELFHTYFNRIAKIIK-VP-GR 382
L V ++ A + + I + T + F+++ I K +P G
Sbjct: 567 LRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGS 626
Query: 383 LYPI---QLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEIS 439
+ Q E + ++ R + + R ++ +K E D+ I ++
Sbjct: 627 ILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVP 686
Query: 440 SIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGI 499
+ ++ Y+++S+ VLPL+S L+ E+Q +VF +PEG R CIV+TN+AETSITI I
Sbjct: 687 TSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNI 746
Query: 500 RFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQY-SL 558
R+VVD GK KE Y+ + + WISKA+A+QR GRAGRTGPG CYRLYS + S
Sbjct: 747 RYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSS 806
Query: 559 LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKE 618
+S PEI R ++S++L + M + ++ FPF +P +E S++ L+ GAIDS+
Sbjct: 807 FPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEG 866
Query: 619 RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
+T LG +S P+ KML+ G + V++L + LS+ F ++
Sbjct: 867 VLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSK 916
Score = 239 (89.2 bits), Expect = 9.0e-66, Sum P(3) = 9.0e-66
Identities = 52/118 (44%), Positives = 79/118 (66%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR------- 82
+I+E++ +LP+ +Q I++ + VVII G TG GK+TQ+PQ+L +AGF
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPG 449
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
IA TQPRR+A +S++KRV+ E L+ +S+ V YQIRF+ T I F+T+G+LLR+
Sbjct: 450 MIAITQPRRVAAVSIAKRVS-EELTGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRE 506
Score = 194 (73.4 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 44/125 (35%), Positives = 69/125 (55%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLYS + S +S PEI R ++S++L + M + ++ FPF +P
Sbjct: 788 RTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRS 847
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+E S++ L+ GAIDS+ +T LG +S P+ KML+ G + ++ L AL
Sbjct: 848 RLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSAL 907
Query: 928 NFGAI 932
+ +
Sbjct: 908 SINQL 912
Score = 145 (56.1 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 48/180 (26%), Positives = 92/180 (51%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV----------KIILMSA 359
E+++D L++Y +++DE HER ++ D LLG++ ++ E+ K+I+MSA
Sbjct: 506 ELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSA 565
Query: 360 TINIELFHT---YFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSII 416
T+ + F F+ IIK+ R YP+ + ++ TK + L + ++ +I
Sbjct: 566 TLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRT-----TKPDYLQDA-FDKVC-LI 618
Query: 417 DKKYPRTERGDVLIFMSGISEISSIV-----RAAQEYNE-KSQGWIVLPLHSTLSLEEQD 470
K+ P G +L+F++G E+ + R + + KS+ IV+ T+S+E +D
Sbjct: 619 HKRLPA---GSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVS-RKTMSVENED 674
Score = 88 (36.0 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV----------KIILMSA 1164
++++D L++Y +++DE HER ++ D LLG++ ++ E+ K+I+MSA
Sbjct: 506 ELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSA 565
Query: 1165 TINIELF 1171
T+ + F
Sbjct: 566 TLRVTDF 572
Score = 81 (33.6 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVL 284
++++D L++Y +I+DE HER + D LLG++S + E+ +D + ++++
Sbjct: 506 ELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIM 563
Score = 76 (31.8 bits), Expect = 9.6e-28, Sum P(3) = 9.6e-28
Identities = 31/112 (27%), Positives = 47/112 (41%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN---- 1078
L L N GAIDS+ +T LG +S P+ KML+ G + ++ L AL+
Sbjct: 853 LKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQL 912
Query: 1079 FVH-HSXXXXXXXAGERLESMDA-NEVEFRLKHDPKQVQVAADNFLSSYDVL 1128
FV S R E D ++ E + K + K N +S + +
Sbjct: 913 FVSKQSLLYDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAI 964
Score = 75 (31.5 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
L L N GAIDS+ +T LG +S P+ KML+ G + ++ L AL+ +
Sbjct: 853 LKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQL 912
Score = 75 (31.5 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
L L N GAIDS+ +T LG +S P+ KML+ G + ++ L AL+ +
Sbjct: 853 LKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQL 912
Score = 66 (28.3 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 376 IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGI 435
+++V + +QL+ V++ + + YI +++ DK+ +RG V +F SG
Sbjct: 1018 MVRVEKEFFKLQLKPPTSVQIKALR--QFIASAYIDQVALYDKE----KRGYVTLFPSG- 1070
Query: 436 SEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEE-QDRVFHYAPEGLRKCIVSTNIAETS- 493
SE+ V + YN S+ + L LH + S + +PE L + +T + S
Sbjct: 1071 SEVVQFV-PDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEISPEHLARLAKNTTLLSYSK 1129
Query: 494 -ITIDGIRFVVDSGK 507
++ IR++ ++ K
Sbjct: 1130 PLSYPPIRYLDNATK 1144
Score = 55 (24.4 bits), Expect = 9.0e-66, Sum P(3) = 9.0e-66
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 710 KKWCKRRGIEEQRFYEVTKLRSQFKQVLG 738
+K+CK + E+ EVT LR KQ++G
Sbjct: 987 RKFCKENYLREKALEEVTNLR---KQIIG 1012
Score = 46 (21.3 bits), Expect = 4.6e-18, Sum P(3) = 4.6e-18
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 368 TYFNRIAKIIK-VPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRI 412
T F +++++ VP R Y I EY + L ++S ++ P I
Sbjct: 1065 TLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTEI 1110
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 526 (190.2 bits), Expect = 2.7e-65, Sum P(4) = 2.7e-65
Identities = 172/559 (30%), Positives = 283/559 (50%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLSSYDVLVLDEIHER 290
D L++ +I+DEVHER + DFLL ++ L ++ L S V D E+
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDL---HLILMSATV---DS--EK 738
Query: 291 HLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK--C--LL 346
F C + + ++ ++ +V L++I E F+L C L
Sbjct: 739 -----FSTYFTHCPI---LRISGRSY--PVEVFHLEDIIEET---GFVLEKDSEYCQKFL 785
Query: 347 HSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLEY-----HPIVELDRTKS 401
E+ I + S I+ + Y I L P +Y H I+ ++ K
Sbjct: 786 EEEEEITINVTSKAGGIKKYQEY---IPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKI 842
Query: 402 EKLDPG-PYIRILSIIDK--KYPRTERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIV 457
LD + L I D+ ++ E G VLIF+ G++ I + + + S+ + V
Sbjct: 843 N-LDLILELLTYLEITDRSPQFKNVE-GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKV 900
Query: 458 LPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTA 517
+ LHS LS ++Q F P+G+RK +++TNIAET ITI + FV+D+G+ KE Y ++
Sbjct: 901 IALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESS 960
Query: 518 KMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLL 577
+MS+L E ++SKASA QR+GRAGR G C+R+Y+ E++ +YS PEI RV ++ L L
Sbjct: 961 QMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCL 1020
Query: 578 SLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSLGRFLSDLPVDI 634
++ LG F L+ P + I +++ L + GA + E ++T LG+ L+ LPV++
Sbjct: 1021 HIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNV 1080
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLN 694
+GKML+FG++F +D V +LAAV++ +SPFT R + + A+ L D LT+ N
Sbjct: 1081 KIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYN 1140
Query: 695 AYKEWLGVKKDR-VRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDAS 752
AY W +++ RS+ +C+R + + +++ + +L LI S
Sbjct: 1141 AYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTLLK---LIFYSIKTYYS 1197
Query: 753 LSSRERALRHGEIKLLQAI 771
S + L EI LL+A+
Sbjct: 1198 SSRASQTLSFQEIALLKAV 1216
Score = 239 (89.2 bits), Expect = 2.7e-65, Sum P(4) = 2.7e-65
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 24 KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA----- 78
K+ L+K R+ LPV +++ I++T+ + RVV++AG+TG GKSTQ+P +L++
Sbjct: 558 KYQRLLKERQ---QLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 79 -GFQR--IACTQPRRIACISLSKRVAYETLSQY-----SNLVGYQIRFEKHRREKTKIVF 130
G + I CTQPRRI+ +SL+ RV E + ++L GYQIR E E T++++
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLY 674
Query: 131 ITEGLLLR--QDSGLITDI 147
T G+LLR Q+ GL+T++
Sbjct: 675 CTTGVLLRKLQEDGLLTNV 693
Score = 189 (71.6 bits), Expect = 8.0e-29, Sum P(4) = 8.0e-29
Identities = 41/118 (34%), Positives = 70/118 (59%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G C+R+Y+ E++ +YS PEI RV ++ L L ++ LG F L+ P
Sbjct: 984 RVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQL 1043
Query: 867 ENIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ I +++ L + GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1044 QVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 132 (51.5 bits), Expect = 5.2e-23, Sum P(4) = 5.2e-23
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D L++ +++DE+HER + DFLL ++K +L +++ +ILMSAT++ E F TYF
Sbjct: 687 DGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHC 746
Query: 1179 AKDLLSG 1185
+SG
Sbjct: 747 PILRISG 753
Score = 95 (38.5 bits), Expect = 3.0e-19, Sum P(4) = 3.0e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 923 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 3.0e-19, Sum P(4) = 3.0e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 973 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 95 (38.5 bits), Expect = 3.0e-19, Sum P(4) = 3.0e-19
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 1023 LDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
+ L GA + E ++T LG+ L+ LPV++ +GKML+FG++F +D + L
Sbjct: 1050 MHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATL 1101
Score = 74 (31.1 bits), Expect = 3.9e-17, Sum P(4) = 3.9e-17
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 1034 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN----FVHH-SXXXXX 1088
++ ++T LG+ L+ LPV++ +GKML+FG++F +D + L + F
Sbjct: 1062 NEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEA 1121
Query: 1089 XXAGERLESMDANEVEF--------RLKHDP---KQVQVAADNFLSSYDVLVLDEIHER 1136
A L D++ + + + + ++ NFL+ +L L+EI R
Sbjct: 1122 DLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRR 1180
Score = 56 (24.8 bits), Expect = 2.7e-65, Sum P(4) = 2.7e-65
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 1186 STARSHKDVTILKVILASGLYPQVA-IGDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
S S +++ +LK +L +GLY V I + T K A +G +HP SV
Sbjct: 1202 SQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV 1258
Score = 37 (18.1 bits), Expect = 2.7e-65, Sum P(4) = 2.7e-65
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 1278 LVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTRLVFDSWIEVFVPLQEAKST 1337
L+Y + ++ +L + ++LLF I L D WI P++ A
Sbjct: 1268 LLYQEKIRYARVYLRETTLITPF-SVLLFGGDIEVQHRERLLSVDGWIYFQAPVKIAVIF 1326
Query: 1338 ADVNQLEHSLTR 1349
+ L S+ R
Sbjct: 1327 KQLRVLIDSVLR 1338
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 474 (171.9 bits), Expect = 3.6e-65, Sum P(3) = 3.6e-65
Identities = 145/445 (32%), Positives = 235/445 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-EVKIILMSATINIELFHT 368
E+ ++ L Y V+V+DE HER + D +LG +K L+ +++II+MSAT+ E F
Sbjct: 187 ELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSE 246
Query: 369 YFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDV 428
+FN A I+ V GR + ++ +Y+ L + +D IR I++ E GD+
Sbjct: 247 FFNN-APILFVEGRKFDVK-QYY----LKAPTDDIVDA--VIRCCIQINQG---EELGDI 295
Query: 429 LIFMSGISEISSIV----RAAQEYNEKSQGWIVLP--LHSTLSLEEQDRVFHYAP-EGL- 480
L F+ G EI V + A+ ++++ +++P L++ L +Q VF AP +G
Sbjct: 296 LCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVF--APIKGFK 353
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSG--KVKEMSYDVTAKMSTLQEFWISKASAEQRKGR 538
RK + STNIAETS+TI G++FVVDSG KVK + + ++TL IS+ASA QR GR
Sbjct: 354 RKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLG--LATLLTVPISQASAMQRSGR 411
Query: 539 AGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPA 598
AGR G +RLY E Y L + S PEI R + S +L L G+ D+ + + E P
Sbjct: 412 AGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGK 471
Query: 599 ENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAV 658
E I ++ L + GA+D++ ++T G+ ++ LP+ L +L+ S + V+ + +
Sbjct: 472 EAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSC 531
Query: 659 LSVQSPFTNRAFRDPDCETARKELE-----SNHGDPLTV---LNAYKEWLGVKKDRVRSK 710
LSV++ N + + D E + L +GD + + + Y LG +D +
Sbjct: 532 LSVENLLLNPSPEERD-EVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSER 590
Query: 711 K-WCKRRGIEEQRFYEVTKLRSQFK 734
WCK I + F V ++R Q +
Sbjct: 591 NDWCKGLCISIRGFKNVIRVRDQLR 615
Score = 240 (89.5 bits), Expect = 3.6e-65, Sum P(3) = 3.6e-65
Identities = 53/129 (41%), Positives = 83/129 (64%)
Query: 17 LDFKQ-KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYL 75
L +K K + S L+K+RET LPV Q+K+EI+ + V ++ G+TG GKSTQIPQ++
Sbjct: 62 LTYKSLKSRASDLLKMRET---LPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFV 118
Query: 76 VQAGFQR-----IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVF 130
++ + IA TQPRR+A I+L+ RVA E + VGY +RF+ +T++ +
Sbjct: 119 LEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKY 178
Query: 131 ITEGLLLRQ 139
+T+G+LLR+
Sbjct: 179 LTDGMLLRE 187
Score = 136 (52.9 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G +RLY E Y L + S PEI R + S +L L G+ D+ + + E P E
Sbjct: 414 RESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEA 473
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGS 912
I ++ L + GA+D++ ++T G+ ++ LP+ L +L+ S
Sbjct: 474 IVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKAS 517
Score = 117 (46.2 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-EVKIILMSATINIELFHTYFN 1176
L Y V+V+DE HER + D +LG +K L+ +++II+MSAT+ E F +FN
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFN 249
Score = 73 (30.8 bits), Expect = 3.6e-65, Sum P(3) = 3.6e-65
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
L Y V+V+DE HER + D +LG +K L+
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSLI 223
Score = 64 (27.6 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L Y ++++DE HER + D +LG +
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFL 219
Score = 50 (22.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 962
GA+D++ ++T G+ ++ LP+ L +L+ S
Sbjct: 485 GALDTRGKITKRGQQMALLPLQPHLSSVLIKAS 517
Score = 50 (22.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 1012
GA+D++ ++T G+ ++ LP+ L +L+ S
Sbjct: 485 GALDTRGKITKRGQQMALLPLQPHLSSVLIKAS 517
Score = 50 (22.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 1062
GA+D++ ++T G+ ++ LP+ L +L+ S
Sbjct: 485 GALDTRGKITKRGQQMALLPLQPHLSSVLIKAS 517
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 544 (196.6 bits), Expect = 3.9e-65, Sum P(4) = 3.9e-65
Identities = 144/472 (30%), Positives = 234/472 (49%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-------VKIILMSATIN 362
E+ D L Y +V+DE+HER + D L G +K +L S + +K++ MSAT N
Sbjct: 252 ELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLPLKVVAMSATAN 311
Query: 363 IELFHTYFN-----RIAKI---------IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGP 408
IE +F+ R AK +K+ GR +P+++ + P K +
Sbjct: 312 IETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSP-------KPVPVLADE 364
Query: 409 YIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQGWI----VLPLHSTL 464
++ + I P GD+L+F+ G I I R +EY + LPL L
Sbjct: 365 VVKTVFKIHCGEPLP--GDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQL 422
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
S+E Q F +RK +++TNIAETS+T+ G+R+V+D+GK K Y + + +L
Sbjct: 423 SMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLV 482
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGL 584
ISK+SA QR GRAGR PG CYRLY+E+ Y + + PEI R ++ L ++ G+
Sbjct: 483 DAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAALIMMARGV 542
Query: 585 GDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLV--- 641
D+ FP ++ P +E ++ L GAID + +T LG+ ++ LPV PLG++L+
Sbjct: 543 DDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITELGKKMARLPVAAPLGRVLLAAA 602
Query: 642 ---FGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKE 698
+ + ID + ++ + + R+ + E R+EL GD + L +
Sbjct: 603 SPAYDCLLEVIDIISCISGGDDIFHQLQSEEARE-EVEEYRRELRRREGDLMVYLTTMQM 661
Query: 699 WLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+ DR +WCK+R I + + +R Q + + G++T+ P PD
Sbjct: 662 YTAENSDRT---EWCKKRKINLRTMRQALNIRRQLRSLCVSEGMLTEKPPPD 710
Score = 184 (69.8 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 36/101 (35%), Positives = 59/101 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG CYRLY+E+ Y + + PEI R ++ L ++ G+ D+ FP ++ P
Sbjct: 499 REAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISR 558
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+E ++ L GAID + +T LG+ ++ LPV PLG++L+
Sbjct: 559 MEKAMVQLNILGAIDDEGAITELGKKMARLPVAAPLGRVLL 599
Score = 107 (42.7 bits), Expect = 3.9e-65, Sum P(4) = 3.9e-65
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 83 IACTQPRRIACISLSKRVAYE--TLSQYSN-----------LVGYQIRFEKHRREKTKIV 129
IA TQPRR+A +L+ RVA E T Q S LVGY +RF+ + + TKI
Sbjct: 183 IAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTKIK 242
Query: 130 FITEGLLLRQ 139
F+TEG+LL++
Sbjct: 243 FLTEGMLLQE 252
Score = 102 (41.0 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-------VKIILMSATINIELF 1171
D L Y +V+DE+HER + D L G +K +L S + +K++ MSAT NIE
Sbjct: 256 DPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLSPDKPGRGGLPLKVVAMSATANIETL 315
Query: 1172 HTYFNRIAKDLLSGSTARSHKDVTILKV 1199
+F+ I +D K LK+
Sbjct: 316 ENFFS-IPQDDRKAKAESDGKAEQTLKI 342
Score = 97 (39.2 bits), Expect = 3.9e-65, Sum P(4) = 3.9e-65
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYL 75
+ +LP+ Q++ I + + K V+I+ G+TG GKSTQ+PQ+L
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFL 154
Score = 74 (31.1 bits), Expect = 7.9e-12, Sum P(4) = 7.9e-12
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 927 LNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
LN GAID + +T LG+ ++ LPV PLG++L+
Sbjct: 566 LNILGAIDDEGAITELGKKMARLPVAAPLGRVLL 599
Score = 74 (31.1 bits), Expect = 7.9e-12, Sum P(4) = 7.9e-12
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 977 LNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
LN GAID + +T LG+ ++ LPV PLG++L+
Sbjct: 566 LNILGAIDDEGAITELGKKMARLPVAAPLGRVLL 599
Score = 74 (31.1 bits), Expect = 7.9e-12, Sum P(4) = 7.9e-12
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 1027 LNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
LN GAID + +T LG+ ++ LPV PLG++L+
Sbjct: 566 LNILGAIDDEGAITELGKKMARLPVAAPLGRVLL 599
Score = 70 (29.7 bits), Expect = 3.9e-65, Sum P(4) = 3.9e-65
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
D L Y +V+DE+HER + D L G +K +L S
Sbjct: 256 DPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLS 290
Score = 60 (26.2 bits), Expect = 4.3e-64, Sum P(4) = 4.3e-64
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVISPPL 263
D L Y +++DEVHER + D L G + L
Sbjct: 256 DPSLRQYSAVVVDEVHERGIDVDLLCGFLKQML 288
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 30/133 (22%), Positives = 58/133 (43%)
Query: 1093 ERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIH-ERHLHGD---FLLGV-- 1146
E+ ++ + + H PK V V AD + + + +IH L GD FL G
Sbjct: 337 EQTLKIEGRQFPVEIIHSPKPVPVLADEVVKT-----VFKIHCGEPLPGDILVFLYGQEP 391
Query: 1147 ---IKCLLHSTA--------EVKIILMSATINIELFHTYFN----RIAKDLLSGSTARSH 1191
I+ L+ A ++K + + +++E HT F R+ K +L+ + A +
Sbjct: 392 IEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETS 451
Query: 1192 KDVTILKVILASG 1204
V ++ ++ +G
Sbjct: 452 VTVPGVRYVIDTG 464
Score = 38 (18.4 bits), Expect = 2.8e-08, Sum P(4) = 2.8e-08
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 476 APEGLRKCIVSTNIAETSITIDGIRFVVDSGK 507
A E + KC + T++ + +V GK
Sbjct: 721 AAETITKCFMKGFCTSTAMLAPDLSYVTSQGK 752
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 460 (167.0 bits), Expect = 5.0e-65, Sum P(3) = 5.0e-65
Identities = 126/407 (30%), Positives = 216/407 (53%)
Query: 352 VKIILMSATINIELFHTYFNR---------IAKIIKVPGRLYPIQLEYHPIVELDRTKSE 402
+K+I+ SAT+N F +FN + I+ + GR YP+ + Y L+ + S
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHY-----LEESTSN 268
Query: 403 KLDPGPYIRILSIIDKKYPR------TERGDVLIFMSGISEISSIVRA--AQEYNEKSQG 454
+ I+ I + P T + ++ + + + I+R Q ++++ Q
Sbjct: 269 YIQT-TIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQP 327
Query: 455 WI---VLPLHSTLSLEEQDRVFHYAPEG--LRKCIVSTNIAETSITIDGIRFVVDSGKVK 509
++ +LP++S LS+ +Q +VF + +RK I+STNIAETSITIDG+ +VVD G VK
Sbjct: 328 FMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVK 387
Query: 510 EMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIR 568
SYD + + +L SK+SA QR GRAGR+ G CYRLY+E Y LL + + PEI+
Sbjct: 388 IKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQ 447
Query: 569 RVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTS-LGRFL 627
R ++ + +L L +G+ ++ F F+ PP+ ++ + L GA+D ++T+ G +
Sbjct: 448 RSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTGMIM 507
Query: 628 SDLPVDIPLGKMLVFGSM--FHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESN 685
++ P D KM++ S F+ D +++ A+L++Q FTN+ + +RK L
Sbjct: 508 AEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTNQNHK------SRKHLLVK 561
Query: 686 HGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQ 732
GD LT+LN + ++ + S +WC + I + V ++R Q
Sbjct: 562 EGDHLTLLNIFNSFISNQS----SPQWCNQHQINYKAMQRVLQVRKQ 604
Score = 250 (93.1 bits), Expect = 5.0e-65, Sum P(3) = 5.0e-65
Identities = 53/117 (45%), Positives = 81/117 (69%)
Query: 29 MKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAG----FQRIA 84
+ I++ + SLP+ Q ++ I+ + K ++I G+TGCGKSTQIPQYL ++G F+ I
Sbjct: 46 LTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTIL 105
Query: 85 CTQPRRIACISLSKRVAYETLSQY-SNLVGYQIRF-EKHRREKTKIVFITEGLLLRQ 139
CTQPRR+A ISL++RVA E Q+ VGY +RF EK +T+I ++T+G+L+R+
Sbjct: 106 CTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIRE 162
Score = 163 (62.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 37/124 (29%), Positives = 66/124 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R+ G CYRLY+E Y LL + + PEI+R ++ + +L L +G+ ++ F F+ PP+
Sbjct: 419 RSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSS 478
Query: 868 NIESSVRSLTQHGAIDSKERVTT-LGRFLSDLPVDIPLGKMLVFGSM--FHQIDTMLLLD 924
++ + L GA+D ++T G +++ P D KM++ S F+ D + +
Sbjct: 479 SLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITIT 538
Query: 925 LALN 928
LN
Sbjct: 539 AMLN 542
Score = 123 (48.4 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 44/152 (28%), Positives = 75/152 (49%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL---HSTAE-------VKIILMSA 359
E+ D L Y V+++DE HER L D L+G++K + +ST +K+I+ SA
Sbjct: 162 EMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSA 221
Query: 360 TINIELFHTYFN--RIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIR--ILSI 415
T+N F +FN + K + I+ +P+ D E+ YI+ I +I
Sbjct: 222 TLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPV---DIHYLEE-STSNYIQTTIQTI 277
Query: 416 IDKKYPRTERGDVLIFMSGISEISSIVRAAQE 447
ID + GD+L+F++G EI +++ +
Sbjct: 278 IDI-HTTQPPGDILVFLTGQEEIEKLIQTLDD 308
Score = 104 (41.7 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 1101 NEVEFRLKH--DPKQV-QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL---HST 1154
+++E R+K+ D + ++ D L Y V+++DE HER L D L+G++K + +ST
Sbjct: 145 SDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNST 204
Query: 1155 AE-------VKIILMSATINIELFHTYFN 1176
+K+I+ SAT+N F +FN
Sbjct: 205 NNNNNNDNSLKLIISSATLNANDFFNFFN 233
Score = 79 (32.9 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 213 NEVEFRLKH--DPKQV-QVATDNFLSSYDILILDEVHERHLYGDFLLGVI 259
+++E R+K+ D + ++ D L Y ++++DE HER L D L+G++
Sbjct: 145 SDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLL 194
Score = 76 (31.8 bits), Expect = 5.0e-65, Sum P(3) = 5.0e-65
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIK 302
D L Y V+++DE HER L D L+G++K
Sbjct: 166 DPLLLKYSVIMIDEAHERSLQTDLLMGLLK 195
Score = 59 (25.8 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 923 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSM--FHQIDTMLLLDLALN 978
L++ GA+D ++T+ G +++ P D KM++ S F+ D + + LN
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLN 542
Score = 59 (25.8 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 973 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSM--FHQIDTMLLLDLALN 1028
L++ GA+D ++T+ G +++ P D KM++ S F+ D + + LN
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLN 542
Score = 59 (25.8 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 1023 LDLALNFGAIDSKERVTS-LGRFLSDLPVDIPLGKMLVFGSM--FHQIDTMLLLDLALN 1078
L++ GA+D ++T+ G +++ P D KM++ S F+ D + + LN
Sbjct: 484 LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLN 542
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 470 (170.5 bits), Expect = 7.0e-65, Sum P(4) = 7.0e-65
Identities = 114/333 (34%), Positives = 182/333 (54%)
Query: 428 VLIFMSGISEISSIVRAAQEYN--EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIV 485
VL+F+ GISEI + ++ + + + LHSTLS +Q VF+ P+G RK ++
Sbjct: 906 VLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVL 965
Query: 486 STNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPG 545
STNIAET +TI + V+D+G +EM Y+ +S L + ++SKA+A+QR GRAGR G
Sbjct: 966 STNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEG 1025
Query: 546 VCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIE 602
+CY L+S+ ++ Y TPEI R+++ ++L + +GDV+ L+ P + NI
Sbjct: 1026 ICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNII 1085
Query: 603 SSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQ 662
++ L Q GA+ E++T LG+FLS LPVD LGK+LV G + +D S+ A+L++
Sbjct: 1086 RALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIG 1145
Query: 663 SPFTNRAFRDPDCETARKEL--ESNHGDPLTVLNAYKEW-------LGVKKDRVRSKKWC 713
SPF + AR E+ D + + AY W LG +D +K+
Sbjct: 1146 SPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYL 1205
Query: 714 KRRGIEEQRFYEVTKLRSQFK--QVLGDSGLIT 744
+ ++ +L S+ K ++LG S + T
Sbjct: 1206 NLEALSMTESLKI-QLLSELKDMKLLGASDVDT 1237
Score = 205 (77.2 bits), Expect = 7.0e-65, Sum P(4) = 7.0e-65
Identities = 46/130 (35%), Positives = 76/130 (58%)
Query: 19 FKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA 78
++Q+ + + K + +N LP +++ IID V +++II+GDTGCGKSTQIP +L++
Sbjct: 612 WRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLEN 671
Query: 79 GFQ-----RIACTQPRRIACISLSKRVAYET-----LSQYSNLVGYQIRFEKHRREKTKI 128
+ +I T+PRRI+ ISL+ RV+ E ++ LVGY +R + T +
Sbjct: 672 STKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPL 731
Query: 129 VFITEGLLLR 138
++T G LR
Sbjct: 732 TYVTTGTFLR 741
Score = 197 (74.4 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 44/126 (34%), Positives = 70/126 (55%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G+CY L+S+ ++ Y TPEI R+++ ++L + +GDV+ L+ P
Sbjct: 1021 RVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPS 1080
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDL 925
+ NI ++ L Q GA+ E++T LG+FLS LPVD LGK+LV G + +D +
Sbjct: 1081 STNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVA 1140
Query: 926 ALNFGA 931
L G+
Sbjct: 1141 MLTIGS 1146
Score = 147 (56.8 bits), Expect = 7.0e-65, Sum P(4) = 7.0e-65
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 315 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIA 374
N + S L++DE+HER + D LL + LL +KII+MSAT+N E F YF +
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEG-S 805
Query: 375 KIIKVPGRLYPIQLEY 390
+I +PG+ YP+ Y
Sbjct: 806 NLITIPGKTYPVHRFY 821
Score = 120 (47.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 1120 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIA 1179
N + S L++DE+HER + D LL + LL +KII+MSAT+N E F YF
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSN 806
Query: 1180 KDLLSGSTARSHK 1192
+ G T H+
Sbjct: 807 LITIPGKTYPVHR 819
Score = 109 (43.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 981
GA+ E++T LG+FLS LPVD LGK+LV G + +D + L G+
Sbjct: 1095 GALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGS 1146
Score = 109 (43.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGA 1031
GA+ E++T LG+FLS LPVD LGK+LV G + +D + L G+
Sbjct: 1095 GALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGS 1146
Score = 106 (42.4 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQID 1068
GA+ E++T LG+FLS LPVD LGK+LV G + +D
Sbjct: 1095 GALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVD 1133
Score = 59 (25.8 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 232 NFLSSYDILILDEVHERHLYGDFLL 256
N + S LI+DEVHER + D LL
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLL 771
Score = 56 (24.8 bits), Expect = 2.0e-55, Sum P(4) = 2.0e-55
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLL 298
+ S L++DE+HER + D LL
Sbjct: 749 IESVTHLIIDEVHERSIDSDLLL 771
Score = 39 (18.8 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 819 YSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDV 855
+++E+Y L S E ++ + S L + +G DV
Sbjct: 1199 FAKEKYLNLEALSMTESLKIQLLSELKDMKLLGASDV 1235
Score = 38 (18.4 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 574 SLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLG 624
S+ SL L +++ L A + +S RS+ + A+ KE + G
Sbjct: 1211 SMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVIPKEHDINSG 1261
Score = 37 (18.1 bits), Expect = 7.0e-65, Sum P(4) = 7.0e-65
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 842 SLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKE 886
S+ SL L +++ L A + +S RS+ + A+ KE
Sbjct: 1211 SMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVIPKE 1255
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 454 (164.9 bits), Expect = 7.1e-65, Sum P(4) = 7.1e-65
Identities = 114/342 (33%), Positives = 189/342 (55%)
Query: 423 TERGDVLIFMSGISEISS----IVRAAQEYNEKSQG-WIVLPLHSTLSLEEQDRVFHYAP 477
++ G +LIF+ G EI S I+ + + + + + V LHS + +Q V P
Sbjct: 530 SDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPP 589
Query: 478 EGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKG 537
G+RK I+STNIAETSIT++ + FV+DSGK+KE S+D + ++ L+ WISKASA QR+G
Sbjct: 590 SGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRG 649
Query: 538 RAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLV-CMGLGDVRKFP 591
RAGR PGVC+ L+S ++ + E+ TPE+RR+ + L LL+ V C + + K P
Sbjct: 650 RAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAP 709
Query: 592 FLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 651
+ PPA + ++++ L + A+D E +T LG L++LPV+ LGKM++ + +D
Sbjct: 710 --DPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDP 767
Query: 652 VLSLAAVLSVQSPFT--NRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVKKDRVR 708
+L++A L+ + PF A + RK L + D + +L A++ W + D
Sbjct: 768 ILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKARSDGWE 827
Query: 709 SKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPD 750
+ +C++ + + + +R+Q L G + G D
Sbjct: 828 -RVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGAD 868
Score = 238 (88.8 bits), Expect = 7.1e-65, Sum P(4) = 7.1e-65
Identities = 53/120 (44%), Positives = 76/120 (63%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIACTQPR 89
+ SLPV + K+EI+ + + +VV+I G+TG GK+TQIPQ+L+ ++ RI CTQPR
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPCRIFCTQPR 159
Query: 90 RIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ----DSGLIT 145
R+A I++++RVA E + VGYQIR E +T + F T G+LLR DS L T
Sbjct: 160 RLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALST 219
Score = 159 (61.0 bits), Expect = 3.5e-33, Sum P(4) = 3.5e-33
Identities = 41/127 (32%), Positives = 72/127 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSL-----LLSLV-CMGLGDVRKFPFLE 862
R PGVC+ L+S ++ + E+ TPE+RR+ + L LL+ V C + + K P +
Sbjct: 653 RCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLAPVNCPVVDFLMKAP--D 710
Query: 863 APPAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLL 922
PPA + ++++ L + A+D E +T LG L++LPV+ LGKM++ + +D +L
Sbjct: 711 PPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILT 770
Query: 923 LDLALNF 929
+ L +
Sbjct: 771 IACTLAY 777
Score = 121 (47.7 bits), Expect = 7.1e-65, Sum P(4) = 7.1e-65
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 370
+A D+ LS+ +++DE+HER DFLL ++ +L + +K+I+ SA ++ LF YF
Sbjct: 211 MAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYF 270
Query: 371 NRIAKIIKVPGRLYPIQ 387
+I + GR + ++
Sbjct: 271 GS-CPVIHIQGRPFEVK 286
Score = 110 (43.8 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+A D+ LS+ +++DE+HER DFLL ++ +L + +K+I+ SA ++ LF YF
Sbjct: 211 MAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYF 270
Score = 71 (30.1 bits), Expect = 1.1e-59, Sum P(4) = 1.1e-59
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+A D+ LS+ +I+DEVHER + DFLL
Sbjct: 211 MAGDSALSTVTHVIVDEVHERDRFSDFLL 239
Score = 71 (30.1 bits), Expect = 3.6e-24, Sum P(4) = 3.6e-24
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D E +T LG L++LPV+ LGKM++ + +D +L + L +
Sbjct: 729 AMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 777
Score = 71 (30.1 bits), Expect = 3.6e-24, Sum P(4) = 3.6e-24
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D E +T LG L++LPV+ LGKM++ + +D +L + L +
Sbjct: 729 AMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 777
Score = 71 (30.1 bits), Expect = 3.6e-24, Sum P(4) = 3.6e-24
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D E +T LG L++LPV+ LGKM++ + +D +L + L +
Sbjct: 729 AMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAY 777
Score = 68 (29.0 bits), Expect = 2.3e-59, Sum P(4) = 2.3e-59
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
++A D LS+ +++DE+HER DFLL ++ +L +
Sbjct: 210 LMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQN 248
Score = 45 (20.9 bits), Expect = 7.1e-65, Sum P(4) = 7.1e-65
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1196 ILKVILASGLYPQVAIGDEFN---TSETVKEALFH 1227
++K L +G+YP + D N T K+ FH
Sbjct: 881 VVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFH 915
Score = 45 (20.9 bits), Expect = 9.4e-22, Sum P(3) = 9.4e-22
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 1191 HKDVTILKVILASGLYPQVAIGDEFNTSETVKEALFHCKDKGFVS 1235
HKD+ + L V++ ++ SET AL +GF+S
Sbjct: 389 HKDIDSFAQVFHFILTENVSV--DYRHSETSATALMIASGRGFLS 431
Score = 42 (19.8 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 698 EW--LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGL 742
+W L +++ R SK W + I + V QF +L SG+
Sbjct: 1040 KWHSLLLRRMRAPSKPWSQADEITIRAIISVLSTEEQFAGLLQPSGV 1086
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 571 (206.1 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 149/421 (35%), Positives = 232/421 (55%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATIN 362
CLL ++ D LS +++DE HER L+ D LL +++ LL ++++++MSAT +
Sbjct: 404 CLLQHYMK---DRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATAD 460
Query: 363 IELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDP--GPYIRILSIIDKKY 420
Y I+ V GR +P+++ Y P + + ++ G +++ I K
Sbjct: 461 ANQLSQYLFDCG-ILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHK-- 517
Query: 421 PRTER-GDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEG 479
TE+ G +L F++ +E+ A + + S I LPLH LS EEQ VF P G
Sbjct: 518 --TEKEGTILAFLTSQAEVEW---ACERFVAPSA--IALPLHGKLSFEEQFMVFQNYP-G 569
Query: 480 LRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRA 539
RK I +TNIAETS+TI G+++V+DSG VKE Y+ MS L+ +S++SA QR GRA
Sbjct: 570 RRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRA 629
Query: 540 GRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 599
GRT PG CYRLYS+ + + PEIRRV + LL ++ +G+ ++ F F++AP E
Sbjct: 630 GRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPE 689
Query: 600 NIESSVRSLTQHGAIDSKERVTSL---GRFLSDLPVDIPLGKMLVFGSMFHQIDTV-LSL 655
I ++++L Q GA+ K V L G L L ++ LGK L+ G H++ + L
Sbjct: 690 AIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVL 748
Query: 656 AAVLS-VQSPFTNRAFRDPDCETARKELE--SNHGDPLTVLNAYKEWLGVKKDRVRSKKW 712
AAV++ S F D + R +++ +++GD T+L+ YKEW + +DR KW
Sbjct: 749 AAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDR--RNKW 806
Query: 713 C 713
C
Sbjct: 807 C 807
Score = 188 (71.2 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 39/115 (33%), Positives = 69/115 (60%)
Query: 28 LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF---QRIA 84
L + R ++ LP+ Y+++I+ + E+++++ G+TG GKSTQ+ Q+L +G + I
Sbjct: 293 LRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIV 352
Query: 85 CTQPRRIACISLSKRVAYETLSQYS-NLVGYQIRFEKHRREKTKIVFITEGLLLR 138
CTQPR+IA ++L+ RV E+ Y N V F +K+V++T+ LL+
Sbjct: 353 CTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQ 407
Score = 173 (66.0 bits), Expect = 9.1e-23, Sum P(4) = 9.1e-23
Identities = 41/112 (36%), Positives = 63/112 (56%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS+ + + PEIRRV + LL ++ +G+ ++ F F++AP E
Sbjct: 631 RTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEA 690
Query: 869 IESSVRSLTQHGAIDSKERVTTL---GRFLSDLPVDIPLGKMLVFGSMFHQI 917
I ++++L Q GA+ K V L G L L ++ LGK L+ G H++
Sbjct: 691 IAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRM 741
Score = 105 (42.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
D LS +++DE HER L+ D LL +++ LL ++++++MSAT + N++
Sbjct: 412 DRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADA-------NQL 464
Query: 1179 AKDLLS-GSTARSHKDVTILKVILASGLYPQVAIGDEFN-TSETVKEAL-FHCKDKGFVS 1235
++ L G + ++ + V SG +G + + VK A+ H +K
Sbjct: 465 SQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTI 524
Query: 1236 LHPFSVFTSQPDVLRISEDDIVDPPPGLKLPGRNVISSKHQLLVYMS 1282
L + TSQ +V E + P + LP +S + Q +V+ +
Sbjct: 525 L---AFLTSQAEVEWACERFVA--PSAIALPLHGKLSFEEQFMVFQN 566
Score = 71 (30.1 bits), Expect = 9.1e-23, Sum P(4) = 9.1e-23
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
D LS +++DE HER L+ D LL +++ LL +++
Sbjct: 412 DRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDL 450
Score = 62 (26.9 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D LS +I+DE HER L D LL ++
Sbjct: 412 DRSLSGISCVIIDEAHERSLNTDLLLALL 440
Score = 51 (23.0 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 388 LEYHPIVELDRTKSEKLDP 406
LEYHP++ +R K K +P
Sbjct: 1685 LEYHPLITCERYKKFKENP 1703
Score = 37 (18.1 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 908 LVFGSMFHQIDTMLLLDLALNFGAI 932
+VFG + +D L+ A +F A+
Sbjct: 907 VVFGELLSIVDQYLVCVTAFDFEAL 931
Score = 37 (18.1 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 958 LVFGSMFHQIDTMLLLDLALNFGAI 982
+VFG + +D L+ A +F A+
Sbjct: 907 VVFGELLSIVDQYLVCVTAFDFEAL 931
Score = 37 (18.1 bits), Expect = 1.0e-64, Sum P(4) = 1.0e-64
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1008 LVFGSMFHQIDTMLLLDLALNFGAI 1032
+VFG + +D L+ A +F A+
Sbjct: 907 VVFGELLSIVDQYLVCVTAFDFEAL 931
Score = 37 (18.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 233 FLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAADYFLS 277
FL+ + E+ + G L + P L GG I YF S
Sbjct: 1118 FLTPESAMKATEIQKFDFKGSVLK--VFPSLSTGGGIFKMPYFSS 1160
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 442 (160.7 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 104/279 (37%), Positives = 160/279 (57%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L +EQ RVF P+G R CIV+TN+AETS+TI G+R+VVDSG+ KE Y+ +
Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNES 790
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSL 575
+ + + W+SKASA QR GRAGRTGPG CYRLYS + ++S PEI R+ ++S+
Sbjct: 791 NGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESI 850
Query: 576 LLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIP 635
+L + M + ++ FPF P + +++ L GA+D+KE +T G+ +S P+
Sbjct: 851 VLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPR 910
Query: 636 LGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARK-ELESNHGDPLTVLN 694
KML+ + ++++ + LSV PF N F E +RK + N D + +
Sbjct: 911 FSKMLLVSDEKACLPYIVAIVSALSVGDPFINE-FELGINEISRKPNPDENLDDKIREHD 969
Query: 695 AYKEWLGVK-KDRVRSKKWCKRRGIEE-QRFYEVTKLRS 731
+ + K +RSK + R + +F +V +L S
Sbjct: 970 ESTPGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLS 1008
Score = 235 (87.8 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 50/119 (42%), Positives = 79/119 (66%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR------- 82
+I++ + LPV + +I++ + VVII G+TG GK+TQ+PQ+L +AGF
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 83 --IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+ TQPRR+A +S+++RVA E L + + VGYQIRF+ +E TK+ F+T+G+LLR+
Sbjct: 443 GMVGITQPRRVAAVSMAERVANE-LGDHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLRE 500
Score = 172 (65.6 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLYS + ++S PEI R+ ++S++L + M + ++ FPF P
Sbjct: 815 RTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRV 874
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
+ +++ L GA+D+KE +T G+ +S P+ KML+
Sbjct: 875 ALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL 916
Score = 128 (50.1 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVI-KCL-----LHST-----AEVKIILMS 358
E+ D L+ Y +++DE HER+++ D L+G++ +C+ LH ++K+I+MS
Sbjct: 500 EMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMS 559
Query: 359 ATINIELFH---TYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI 415
AT+ + F T F +++V R +P+ + ++ RT D R
Sbjct: 560 ATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNR-----RTAFNYTDEA--FRKTCK 612
Query: 416 IDKKYPRTERGDVLIFMSGISEISSIV-RAAQEY 448
I +K P G +L+F++G EI+ +V R +E+
Sbjct: 613 IHQKLPP---GAILVFLTGQQEITHMVKRLRKEF 643
Score = 77 (32.2 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 12/33 (36%), Positives = 25/33 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVI-KCL 304
D+ L+ Y +++DE HER+++ D L+G++ +C+
Sbjct: 504 DFKLTKYSSIIIDEAHERNINTDILIGMLSRCV 536
Score = 71 (30.1 bits), Expect = 1.9e-58, Sum P(3) = 1.9e-58
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVIS 260
L+ Y +I+DE HER++ D L+G++S
Sbjct: 507 LTKYSSIIIDEAHERNINTDILIGMLS 533
Score = 58 (25.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
+ L GA+D+KE +T G+ +S P+ KML+
Sbjct: 880 IQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL 916
Score = 58 (25.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
+ L GA+D+KE +T G+ +S P+ KML+
Sbjct: 880 IQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL 916
Score = 58 (25.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
+ L GA+D+KE +T G+ +S P+ KML+
Sbjct: 880 IQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL 916
Score = 44 (20.5 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 1237 HPFSVFTSQPDVLRISEDDIVDPPPGLKL-----------PGRNVISSKHQLLVYMSLLE 1285
H F F S+P++LR+ + IV + + P R +S QLL Y+ L+
Sbjct: 832 HDFEQF-SKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALD 890
Query: 1286 TSK 1288
+
Sbjct: 891 NKE 893
Score = 42 (19.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 674 DCETARKELESNHGDPLTVLNAYKEWLG--VKK 704
+ E+A E S D V N +K+W +KK
Sbjct: 296 EVESADSETGSEKFDQNDVANEFKDWANQEIKK 328
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 439 (159.6 bits), Expect = 2.6e-64, Sum P(4) = 2.6e-64
Identities = 118/382 (30%), Positives = 195/382 (51%)
Query: 389 EYHPIVELDRTK-SEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAA 445
EY P ++ + +EK P I L KY T G VL+F+ G + I ++ +
Sbjct: 616 EYGPETKMSMAQLNEKETPFELIEALL----KYIETLNVPGAVLVFLPGWNLIYTMQKHL 671
Query: 446 QEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVV 503
E N S + +LPLHS + EEQ +VF P G+ K I+STNIAETSITI+ + +V+
Sbjct: 672 -EMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVI 730
Query: 504 DSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYS 563
DS K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L +
Sbjct: 731 DSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHM 790
Query: 564 TPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVT 621
TPE+ R + + LS+ + LG + +F +E PP + + + +L + A+D+ + +T
Sbjct: 791 TPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 850
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
LGR L+ LP++ GKM++ G +F+ D V +++A PF + R +
Sbjct: 851 PLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKR---LGYIHRN 907
Query: 682 LESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGD 739
N D + +L+ ++ W + ++ ++C+ + + + + Q K++L +
Sbjct: 908 FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILIN 967
Query: 740 SG-----LITDI---PGPDASL 753
SG L+T + GPD +L
Sbjct: 968 SGFPEDCLLTQVFTNTGPDNNL 989
Score = 219 (82.2 bits), Expect = 2.6e-64, Sum P(4) = 2.6e-64
Identities = 54/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L I + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 359 EQISMDLKNELMY-QLEQDHDLPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 417
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQ+++ Q I TQPRRI+ +S+++RVAYE + GY +RFE
Sbjct: 418 KTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFE 477
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 478 SVLPRPYASIMFCTVGVLLRKLEAGI 503
Score = 179 (68.1 bits), Expect = 3.5e-36, Sum P(4) = 3.5e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 768 RVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 827
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 828 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAA 887
Query: 927 LNF 929
F
Sbjct: 888 TCF 890
Score = 153 (58.9 bits), Expect = 2.6e-64, Sum P(4) = 2.6e-64
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 509 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 567
Query: 383 LYPIQLEY 390
YP+Q EY
Sbjct: 568 TYPVQ-EY 574
Score = 121 (47.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 509 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 556
Score = 91 (37.1 bits), Expect = 3.8e-27, Sum P(4) = 3.8e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 842 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 890
Score = 91 (37.1 bits), Expect = 3.8e-27, Sum P(4) = 3.8e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 842 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 890
Score = 91 (37.1 bits), Expect = 3.8e-27, Sum P(4) = 3.8e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 842 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCF 890
Score = 68 (29.0 bits), Expect = 1.8e-55, Sum P(4) = 1.8e-55
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 509 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 538
Score = 58 (25.5 bits), Expect = 2.0e-54, Sum P(4) = 2.0e-54
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 509 VIVDEIHERDINTDFLLVVL 528
Score = 41 (19.5 bits), Expect = 2.6e-64, Sum P(4) = 2.6e-64
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 1151 LHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVA 1210
L T E K+ L IN + + + + + ++ DV I +LA G+YP V
Sbjct: 951 LRMTWEAKVQLKEILINSGFPE---DCLLTQVFTNTGPDNNLDVVIS--LLAFGVYPNVC 1005
Query: 1211 IGDEFNTSETV--KEALFHCKDKGFVSLHPFS 1240
E T + AL H K V+ PFS
Sbjct: 1006 YHKEKRKILTTEGRNALIH---KSSVNC-PFS 1033
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 494 (179.0 bits), Expect = 5.3e-64, Sum P(4) = 5.3e-64
Identities = 128/394 (32%), Positives = 202/394 (51%)
Query: 376 IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGI 435
+ + GR +P++ Y P + +D ++++ I K P GD+L+F++G
Sbjct: 362 VCHIKGRQFPVKTIYSP-----EPVHDFVDAA--LKVIFQIHYKEPIP--GDILVFLTGQ 412
Query: 436 SEISSIVRAAQEYN---EKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAE 491
+ ++ EY + S I VLPL + L Q RVF AP RK I++TNIAE
Sbjct: 413 ETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAE 472
Query: 492 TSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLY 551
TS+T+ G+R+VVD GK K + + +L ISK++A QRKGRAGR PG CYRLY
Sbjct: 473 TSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLY 532
Query: 552 SEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQH 611
+E+ Y L E +TPEI R + +L++ G+ +V +FPFL PP E +E ++ L
Sbjct: 533 TEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSI 592
Query: 612 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQ--IDTVLSLAAVLSVQSPFTNRA 669
A+D +++ G ++ LP+ LG++L+ S F + V+ + + LSV++ F N
Sbjct: 593 EALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTT 652
Query: 670 FRDPD--CETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVT 727
+ E AR++L GD LT+L + + DR K W +R + + V
Sbjct: 653 SEEKKEAAEAARRDLYRREGDHLTMLATVRAYASENTDR---KAWAERHLVSHRAMQSVM 709
Query: 728 KLRSQFKQVLGDSGLITDIPGPDASLSSRERALR 761
+R Q + L+ P P S S ++R
Sbjct: 710 DVRKQLTAQCRQAKLL---PSPTESRDSDSSSIR 740
Score = 195 (73.7 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG CYRLY+E+ Y L E +TPEI R + +L++ G+ +V +FPFL PP E
Sbjct: 522 REAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREA 581
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMF 914
+E ++ L A+D +++ G ++ LP+ LG++L+ S F
Sbjct: 582 LEKALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDF 627
Score = 124 (48.7 bits), Expect = 5.3e-64, Sum P(4) = 5.3e-64
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 83 IACTQPRRIACISLSKRVAYET-----LSQYSNLVGYQIRFEKHRREKTKIVFITEGLLL 137
IA TQPRR+A ISL++RVA E S ++ VGY +RF+ T++ F+TEG+LL
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLL 272
Query: 138 RQ 139
++
Sbjct: 273 QE 274
Score = 107 (42.7 bits), Expect = 5.3e-64, Sum P(4) = 5.3e-64
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ 81
K+K L +IR+ +LP+ + EI + K V+++ G+TG GKSTQIPQ+LV +
Sbjct: 134 KKKAQMLYEIRK---NLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWC 190
Query: 82 R 82
R
Sbjct: 191 R 191
Score = 98 (39.6 bits), Expect = 5.3e-64, Sum P(4) = 5.3e-64
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE------VKIILMSATINI 363
E+ D +L+ Y +V+DE+HER ++ D ++G ++ L+ E +K ++MSAT ++
Sbjct: 274 EMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATADM 333
Query: 364 ELFHTYF 370
E +F
Sbjct: 334 ESLQEFF 340
Score = 95 (38.5 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE------VKIILMSATINIELFH 1172
D +L+ Y +V+DE+HER ++ D ++G ++ L+ E +K ++MSAT ++E
Sbjct: 278 DPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATADMESLQ 337
Query: 1173 TYF 1175
+F
Sbjct: 338 EFF 340
Score = 72 (30.4 bits), Expect = 2.7e-61, Sum P(4) = 2.7e-61
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL 305
D +L+ Y +V+DE+HER ++ D ++G ++ L+
Sbjct: 278 DPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLV 310
Score = 65 (27.9 bits), Expect = 1.4e-60, Sum P(4) = 1.4e-60
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D +L+ Y +++DEVHER + D ++G +
Sbjct: 278 DPWLTKYSAIVVDEVHERGVNVDLVMGFL 306
Score = 65 (27.9 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 508 VKEMSYDVTAKMSTLQEFWIS--KASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTP 565
+K + TA M +LQEF++ KA Q++ ++ + G VC+ Q+ + YS P
Sbjct: 322 LKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCH--IKGRQFPVKTIYS-P 378
Query: 566 EIRRVSIDSLL 576
E +D+ L
Sbjct: 379 EPVHDFVDAAL 389
Score = 56 (24.8 bits), Expect = 2.9e-15, Sum P(5) = 2.9e-15
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 922 LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMF 964
LL L L+ A+D +++ G ++ LP+ LG++L+ S F
Sbjct: 586 LLQL-LSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDF 627
Score = 56 (24.8 bits), Expect = 2.9e-15, Sum P(5) = 2.9e-15
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 972 LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMF 1014
LL L L+ A+D +++ G ++ LP+ LG++L+ S F
Sbjct: 586 LLQL-LSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDF 627
Score = 56 (24.8 bits), Expect = 2.9e-15, Sum P(5) = 2.9e-15
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1022 LLDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMF 1064
LL L L+ A+D +++ G ++ LP+ LG++L+ S F
Sbjct: 586 LLQL-LSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDF 627
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 62 DTGCGKSTQIPQY--LVQAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
D K +P + L QA QR+ P R I L+ +A ET S V Y +
Sbjct: 430 DPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIA-ETSVTVSG-VRYVVDCG 487
Query: 120 KHRREKTKIVFITEGLLLR 138
K + ++ + + LL++
Sbjct: 488 KAKIKQFRTRLGLDSLLVK 506
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 341 (125.1 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 78/221 (35%), Positives = 130/221 (58%)
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK I+STNI ETSITID I +V+DSG K+ Y+ + + +L SKAS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 600
R G C+RL++++ + L++ S PEI+R I S++L L +G+ D+ F FL+ P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTVLSLAAVL 659
I + L GA++ + +T GR +++ P D+ KM++ + ++ +D +L++A++L
Sbjct: 923 IIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASML 982
Query: 660 S-VQSPFTNRAFRDPDCETARKE-LESNHGDPLTVLNAYKE 698
+ + F + ++ + E +K + GD L LN YK+
Sbjct: 983 THANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQ 1023
Score = 259 (96.2 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 54/135 (40%), Positives = 83/135 (61%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ K L + + D K K K + KI + + LP+ Y+ +I+ + +++I+ G+TG G
Sbjct: 408 EKEKELEKLFEDIK-KRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSG 466
Query: 67 KSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRR 123
KSTQ+ QYL + + I CTQPRRIACI+++ RVA E + VGY IRF+
Sbjct: 467 KSTQLTQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTS 526
Query: 124 EKTKIVFITEGLLLR 138
E TKI+++T+G+ LR
Sbjct: 527 EATKIMYMTDGMFLR 541
Score = 203 (76.5 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 54/166 (32%), Positives = 90/166 (54%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L VL++DE HER LH D +L ++K + + +++++ SAT++ E TYFN A I
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN-CAPI 607
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
VPGR Y + + Y+ I +S + I IL I + +GD+L+F+ G
Sbjct: 608 FYVPGRKYNVDI-YYTI----NNESNYIS-AIVITILQI----HITQGKGDILVFLPGQY 657
Query: 437 EISSIVRAAQ-EYNE---KSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
EI + + + + NE K + ++LP++S+L +E Q R+F E
Sbjct: 658 EIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 160 (61.4 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 34/114 (29%), Positives = 65/114 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G C+RL++++ + L++ S PEI+R I S++L L +G+ D+ F FL+ P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 921
I + L GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 923 IIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 120 (47.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L VL++DE HER LH D +L ++K + + +++++ SAT++ E TYFN
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Score = 77 (32.2 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 47/198 (23%), Positives = 90/198 (45%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTMLLLDLALNFVH 1081
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L++A + +
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDE--ILNVA-SMLT 983
Query: 1082 HSXXXXXXXAGERLESMDANEV-------EFRLKHDPKQVQVAADNFLSSYDVLVLDEIH 1134
H+ G+ E+ + ++ +F L + + Q +NF +S+ D H
Sbjct: 984 HANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYK-QCEENNFSTSF---CYD--H 1037
Query: 1135 ERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSG--STARSHK 1192
H + +K L S E KI + T IE H N I K ++S + A
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICE-KIDIPITTCGIEN-HESINNIKKSIVSAFFTNAALPV 1095
Query: 1193 DVTILKVILAS---GLYP 1207
+ T LK+I + +YP
Sbjct: 1096 NKTELKIIKLNQVVSIYP 1113
Score = 74 (31.1 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK--CLLHSTVEV 311
L VL++DE HER LH D +L ++K C + V
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRV 586
Score = 67 (28.6 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 971
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 67 (28.6 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 1021
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 62 (26.9 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L +LI+DE HER L+ D +L ++
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIV 574
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 341 (125.1 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 78/221 (35%), Positives = 130/221 (58%)
Query: 481 RKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAG 540
RK I+STNI ETSITID I +V+DSG K+ Y+ + + +L SKAS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 541 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 600
R G C+RL++++ + L++ S PEI+R I S++L L +G+ D+ F FL+ P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTVLSLAAVL 659
I + L GA++ + +T GR +++ P D+ KM++ + ++ +D +L++A++L
Sbjct: 923 IIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASML 982
Query: 660 S-VQSPFTNRAFRDPDCETARKE-LESNHGDPLTVLNAYKE 698
+ + F + ++ + E +K + GD L LN YK+
Sbjct: 983 THANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQ 1023
Score = 259 (96.2 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 54/135 (40%), Positives = 83/135 (61%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ K L + + D K K K + KI + + LP+ Y+ +I+ + +++I+ G+TG G
Sbjct: 408 EKEKELEKLFEDIK-KRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSG 466
Query: 67 KSTQIPQYLVQAGFQ---RIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRR 123
KSTQ+ QYL + + I CTQPRRIACI+++ RVA E + VGY IRF+
Sbjct: 467 KSTQLTQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTS 526
Query: 124 EKTKIVFITEGLLLR 138
E TKI+++T+G+ LR
Sbjct: 527 EATKIMYMTDGMFLR 541
Score = 203 (76.5 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 54/166 (32%), Positives = 90/166 (54%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKI 376
L VL++DE HER LH D +L ++K + + +++++ SAT++ E TYFN A I
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN-CAPI 607
Query: 377 IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGIS 436
VPGR Y + + Y+ I +S + I IL I + +GD+L+F+ G
Sbjct: 608 FYVPGRKYNVDI-YYTI----NNESNYIS-AIVITILQI----HITQGKGDILVFLPGQY 657
Query: 437 EISSIVRAAQ-EYNE---KSQGWIVLPLHSTLSLEEQDRVFHYAPE 478
EI + + + + NE K + ++LP++S+L +E Q R+F E
Sbjct: 658 EIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFEDVTE 703
Score = 160 (61.4 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 34/114 (29%), Positives = 65/114 (57%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G C+RL++++ + L++ S PEI+R I S++L L +G+ D+ F FL+ P
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 921
I + L GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 923 IIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 120 (47.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFN 1176
L VL++DE HER LH D +L ++K + + +++++ SAT++ E TYFN
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYFN 603
Score = 77 (32.2 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 47/198 (23%), Positives = 90/198 (45%)
Query: 1023 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTMLLLDLALNFVH 1081
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L++A + +
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDE--ILNVA-SMLT 983
Query: 1082 HSXXXXXXXAGERLESMDANEV-------EFRLKHDPKQVQVAADNFLSSYDVLVLDEIH 1134
H+ G+ E+ + ++ +F L + + Q +NF +S+ D H
Sbjct: 984 HANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYK-QCEENNFSTSF---CYD--H 1037
Query: 1135 ERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSG--STARSHK 1192
H + +K L S E KI + T IE H N I K ++S + A
Sbjct: 1038 FLQYHTLIKVKDVKTQLLSICE-KIDIPITTCGIEN-HESINNIKKSIVSAFFTNAALPV 1095
Query: 1193 DVTILKVILAS---GLYP 1207
+ T LK+I + +YP
Sbjct: 1096 NKTELKIIKLNQVVSIYP 1113
Score = 74 (31.1 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIK--CLLHSTVEV 311
L VL++DE HER LH D +L ++K C + V
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRV 586
Score = 67 (28.6 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 923 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 971
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 67 (28.6 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 973 LDLALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS-MFHQIDTML 1021
L+L + GA++ + +T GR +++ P D+ KM++ + ++ +D +L
Sbjct: 927 LELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEIL 976
Score = 62 (26.9 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 234 LSSYDILILDEVHERHLYGDFLLGVI 259
L +LI+DE HER L+ D +L ++
Sbjct: 549 LEDISVLIIDEAHERALHTDVILPIV 574
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 432 (157.1 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 106/342 (30%), Positives = 180/342 (52%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
G VL+F+ G + I ++ + E N S + +LPLHS + EEQ +VF P G+ K
Sbjct: 648 GAVLVFLPGWNLIYTMQKHL-EMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKI 706
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAETSITI+ + +V+DS K K + M+ W SK + EQRKGRAGR
Sbjct: 707 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 766
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENI 601
PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP + +
Sbjct: 767 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAV 826
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
+ +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + +++A
Sbjct: 827 IEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Query: 662 QSPFTNRAFRDPDCETARKELESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIE 719
PF + R + N D + +L+ ++ W + ++ ++C+ + +
Sbjct: 887 PEPFISEGKR---LGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLN 943
Query: 720 EQRFYEVTKLRSQFKQVLGDSG-----LITDI---PGPDASL 753
+ + Q K++L +SG L+T + GPD +L
Sbjct: 944 MATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNL 985
Score = 220 (82.5 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L + + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 355 EQISMDLKNELMY-QLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQ+++ Q I TQPRRI+ +S+++RVAYE + GY +RFE
Sbjct: 414 KTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFE 473
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 474 SILPRPHASIMFCTVGVLLRKLEAGI 499
Score = 179 (68.1 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 764 RVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 823
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 824 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAA 883
Query: 927 LNF 929
F
Sbjct: 884 TCF 886
Score = 149 (57.5 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 563
Query: 383 LYPIQLEY 390
+P+Q EY
Sbjct: 564 TFPVQ-EY 570
Score = 121 (47.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 552
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 68 (29.0 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 534
Score = 58 (25.5 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 505 VIVDEIHERDINTDFLLVVL 524
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 432 (157.1 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 106/342 (30%), Positives = 180/342 (52%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
G VL+F+ G + I ++ + E N S + +LPLHS + EEQ +VF P G+ K
Sbjct: 648 GAVLVFLPGWNLIYTMQKHL-EMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKI 706
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAETSITI+ + +V+DS K K + M+ W SK + EQRKGRAGR
Sbjct: 707 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 766
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENI 601
PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP + +
Sbjct: 767 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAV 826
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
+ +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + +++A
Sbjct: 827 IEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Query: 662 QSPFTNRAFRDPDCETARKELESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIE 719
PF + R + N D + +L+ ++ W + ++ ++C+ + +
Sbjct: 887 PEPFISEGKR---LGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLN 943
Query: 720 EQRFYEVTKLRSQFKQVLGDSG-----LITDI---PGPDASL 753
+ + Q K++L +SG L+T + GPD +L
Sbjct: 944 MATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNL 985
Score = 220 (82.5 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 53/146 (36%), Positives = 86/146 (58%)
Query: 7 EEWKLLLRTYLDFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCG 66
E+ + L+ L + Q E+ L + + + LPV +++ EI++ + + VVII G TGCG
Sbjct: 355 EQISMDLKNELMY-QLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Query: 67 KSTQIPQYLVQAGFQR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE 119
K+TQ+PQ+++ Q I TQPRRI+ +S+++RVAYE + GY +RFE
Sbjct: 414 KTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFE 473
Query: 120 KHR-REKTKIVFITEGLLLRQ-DSGL 143
R I+F T G+LLR+ ++G+
Sbjct: 474 SILPRPHASIMFCTVGVLLRKLEAGI 499
Score = 179 (68.1 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 764 RVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 823
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 824 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAA 883
Query: 927 LNF 929
F
Sbjct: 884 TCF 886
Score = 149 (57.5 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 563
Query: 383 LYPIQLEY 390
+P+Q EY
Sbjct: 564 TFPVQ-EY 570
Score = 121 (47.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 552
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 91 (37.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 838 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 886
Score = 68 (29.0 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 505 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 534
Score = 58 (25.5 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 505 VIVDEIHERDINTDFLLVVL 524
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 463 (168.0 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 120/360 (33%), Positives = 198/360 (55%)
Query: 411 RILSIIDKKYPRT-ERGDVLIFMSGISEISSIVRA-AQEYNEKSQGWIVLPLHSTLSLEE 468
+++ + K+ + G +++F+ G+ EI+ A + NE ++VLPLHS L+ E+
Sbjct: 848 QVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEAD--FMVLPLHSALTPED 905
Query: 469 QDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWIS 528
Q RVF G RK +VSTNIAETSITID +D+G+ K M Y+ + L E +IS
Sbjct: 906 QKRVFKKY-HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFIS 964
Query: 529 KASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDV 587
KA +QR+GRAGR G+ Y+L+S+ Y + PEI+R+ ++SL LS+ MG+ DV
Sbjct: 965 KAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDV 1024
Query: 588 RKF--PFLEAPPAENIESSVRSLTQHGAIDSKER-VTSLGRFLSDLPV-DIPLGKMLVFG 643
+ F L+APP ++ + R LT G +D ++ +T LG+F+S +PV D GK+L++G
Sbjct: 1025 KAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYG 1084
Query: 644 SMFHQIDTVLSLAAVLSVQS-PFTNRAFRDPDCETARKEL--ESNHGDPLTVLNAYKEWL 700
+F D + L ++L + PF F + E +K L + GD VL +++
Sbjct: 1085 ILFGCTDISVLLVSILGIGVLPFIG-GFENR--EKIKKLLCKYESRGDLFAVLEIVRDYF 1141
Query: 701 GVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLIT-DIP-GPDASLSSRER 758
+K ++ +K+ + + + E+ +Q+ +L D G + D G + L+ ER
Sbjct: 1142 KIKDSSIK-RKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNER 1200
Score = 193 (73.0 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 46/129 (35%), Positives = 73/129 (56%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
++ ++ K S ++ + LP + ++ IID + K VV+I G+TG GKSTQ+ Q+++
Sbjct: 584 EYTKRIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILD 643
Query: 78 A--------GFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIV 129
G +I CTQPRRI+ I L++RV+ E VGY IR + T+I
Sbjct: 644 FLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIK 703
Query: 130 FITEGLLLR 138
F+T G+L+R
Sbjct: 704 FMTTGVLVR 712
Score = 193 (73.0 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
Identities = 46/129 (35%), Positives = 75/129 (58%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G+ Y+L+S+ Y + PEI+R+ ++SL LS+ MG+ DV+ F L+APP
Sbjct: 977 RVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPP 1036
Query: 866 AENIESSVRSLTQHGAIDSKER-VTTLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLL 923
++ + R LT G +D ++ +T LG+F+S +PV D GK+L++G +F D +LL
Sbjct: 1037 LPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLL 1096
Query: 924 DLALNFGAI 932
L G +
Sbjct: 1097 VSILGIGVL 1105
Score = 146 (56.5 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 34/86 (39%), Positives = 56/86 (65%)
Query: 322 VLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPG 381
++V+DE+HER + D ++ ++K LLH +KI+LMSAT+N++LF +F +A + G
Sbjct: 725 IVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATC-HIEG 783
Query: 382 RLYPIQLEY--HPIV-ELD-RTKSEK 403
R +PI +Y I+ +LD + K EK
Sbjct: 784 RTFPIT-DYFLEDILSDLDFKIKREK 808
Score = 136 (52.9 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 1127 VLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGS 1186
++V+DE+HER + D ++ ++K LLH +KI+LMSAT+N++LF +F +A + G
Sbjct: 725 IVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGR 784
Query: 1187 T 1187
T
Sbjct: 785 T 785
Score = 86 (35.3 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 930 GAIDSKER-VTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
G +D ++ +T LG+F+S +PV D GK+L++G +F D +LL L G +
Sbjct: 1051 GLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVL 1105
Score = 86 (35.3 bits), Expect = 2.0e-23, Sum P(4) = 2.0e-23
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 980 GAIDSKER-VTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
G +D ++ +T LG+F+S +PV D GK+L++G +F D +LL L G +
Sbjct: 1051 GLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVL 1105
Score = 80 (33.2 bits), Expect = 8.1e-23, Sum P(4) = 8.1e-23
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 1030 GAIDSKER-VTSLGRFLSDLPV-DIPLGKMLVFGSMFHQIDTMLLL 1073
G +D ++ +T LG+F+S +PV D GK+L++G +F D +LL
Sbjct: 1051 GLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLL 1096
Score = 67 (28.6 bits), Expect = 1.8e-55, Sum P(4) = 1.8e-55
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 281 VLVLDEIHERHLHGDFLLGVIKCLLH 306
++V+DE+HER + D ++ ++K LLH
Sbjct: 725 IVVIDEVHERSIDTDLIVTLMKNLLH 750
Score = 55 (24.4 bits), Expect = 3.3e-54, Sum P(4) = 3.3e-54
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 239 ILILDEVHERHLYGDFLLGVISPPLH 264
I+++DEVHER + D ++ ++ LH
Sbjct: 725 IVVIDEVHERSIDTDLIVTLMKNLLH 750
Score = 53 (23.7 bits), Expect = 7.3e-38, Sum P(4) = 7.3e-38
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 277 SSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGD 336
S Y+ V+D + H + L +I+ L N+ +S +V+ + + D
Sbjct: 437 SIYEGCVMDAKEDSH----YTLNLIEKLKIKLKVYRTKNYPASLPGIVVSTFDKNYKLPD 492
Query: 337 FLLG-VIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYP 385
++ ++ LLH E +I + ++ I+KII PG L P
Sbjct: 493 YIKKQILTRLLHYLQEGNLI--GDMLVYHIYEWLKENISKIIDNPGPLIP 540
Score = 46 (21.3 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1189 RSHKDVTILKVILASGLYPQVA 1210
R+ ++ IL+ IL YP +A
Sbjct: 1197 RNERNFDILRAILTGAFYPHIA 1218
Score = 40 (19.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 548 YRLYSEEQYSLLAEYSTP---EIRRVSIDSLLL 577
Y + SEE L EY T E ++V ++ L L
Sbjct: 1246 YWIRSEEYQDKLEEYKTKISQETQKVDLEDLPL 1278
Score = 37 (18.1 bits), Expect = 1.8e-47, Sum P(4) = 1.8e-47
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERV 56
K+ E + + + +++I+T LKE++
Sbjct: 261 KVWENSIFVDLDESSRQLIETSLKEKI 287
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 430 (156.4 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 109/361 (30%), Positives = 188/361 (52%)
Query: 389 EYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTER--GDVLIFMSGISEISSIVRAAQ 446
+Y P E R+ S+ + + ++ + KY T G VL+F+ G + I ++ +
Sbjct: 617 DYGP--ETRRSMSQLSEKETPLELIEAL-LKYIETLNVPGAVLVFLPGWNLIYAMQKHL- 672
Query: 447 EYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVD 504
E N S + +LPLHS + +EQ +VF P+G+ K I+STNIAETSITI+ + +V+D
Sbjct: 673 EMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVID 732
Query: 505 SGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYST 564
S K K + M+ W SK + EQRKGRAGR PG C+ L S+ ++ L + T
Sbjct: 733 SCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLT 792
Query: 565 PEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTS 622
PEI R + + LS+ + LG + F +E PP + + + +L + A+DS + +T
Sbjct: 793 PEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTP 852
Query: 623 LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKEL 682
LGR L+ LP++ LGKM++ G +F+ D + +++A PF + R +
Sbjct: 853 LGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFISEGRR---LGYVHRNF 909
Query: 683 ESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDS 740
N D + +L+ ++ W + ++ ++C+ + + + + Q K +L ++
Sbjct: 910 AGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNA 969
Query: 741 G 741
G
Sbjct: 970 G 970
Score = 214 (80.4 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 49/118 (41%), Positives = 74/118 (62%)
Query: 35 QNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV-------QAGFQRIACTQ 87
+ SLPV ++++EI+ V VVII G TGCGK+TQ+PQY++ +A I TQ
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQ 446
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKIVFITEGLLLRQ-DSGL 143
PRRI+ +S+++RVA+E + GY +RFE R ++F T G+LLR+ +SG+
Sbjct: 447 PRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLESGI 504
Score = 187 (70.9 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 40/123 (32%), Positives = 68/123 (55%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S+ ++ L + TPEI R + + LS+ + LG + F +E PP
Sbjct: 769 RVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPL 828
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A
Sbjct: 829 DAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAA 888
Query: 927 LNF 929
F
Sbjct: 889 TCF 891
Score = 150 (57.9 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 31/69 (44%), Positives = 50/69 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + E+++ILMSATI+ +F YF II+V GR
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFN-CPIIEVFGR 568
Query: 383 LYPIQLEYH 391
+P+Q EY+
Sbjct: 569 TFPVQ-EYY 576
Score = 121 (47.7 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 22/48 (45%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + E+++ILMSATI+ +F YF
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYF 557
Score = 108 (43.1 bits), Expect = 8.6e-29, Sum P(3) = 8.6e-29
Identities = 53/202 (26%), Positives = 83/202 (41%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHHSXXXXXXX 1090
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 843 ALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEP-----FIS 897
Query: 1091 AGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHL--HGDFLLGVIK 1148
G RL + N R + V F + D + E E H + ++
Sbjct: 898 EGRRLGYVHRNFAGNRFSDHVALLSV----FQAWDDARMGGEDAETRFCEHKRLNMATLR 953
Query: 1149 CLLHSTAEVKIILMSATINIE-LFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYP 1207
+ ++K IL++A E L + FN D ++ DV I +LA G+YP
Sbjct: 954 MTWEAKVQLKDILVNAGFPEECLMNQVFNNTGPD--------NNLDVVIS--LLAFGVYP 1003
Query: 1208 QVAIGDEFNTSETV--KEALFH 1227
V E T + AL H
Sbjct: 1004 NVCYHKEKRKILTTEGRNALIH 1025
Score = 99 (39.9 bits), Expect = 7.4e-28, Sum P(3) = 7.4e-28
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 843 ALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCF 891
Score = 99 (39.9 bits), Expect = 7.4e-28, Sum P(3) = 7.4e-28
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 843 ALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCF 891
Score = 68 (29.0 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + E+
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
Score = 60 (26.2 bits), Expect = 8.3e-54, Sum P(3) = 8.3e-54
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 240 LILDEVHERHLYGDFLLGVISPPLHCGGEI 269
+I+DE+HER + DFLL V+ + EI
Sbjct: 510 VIVDEIHERDINTDFLLVVLRDVIQAFPEI 539
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 428 (155.7 bits), Expect = 4.2e-63, Sum P(4) = 4.2e-63
Identities = 105/342 (30%), Positives = 180/342 (52%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYNEK--SQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
G VL+F+ G + I ++ + E N + + +LPLHS + EEQ +VF P G+ K
Sbjct: 643 GAVLVFLPGWNLIYTMQKHL-EMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAGVTKV 701
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAETSITI+ + +V+DS K K + M+ W SK + EQRKGRAGR
Sbjct: 702 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 761
Query: 544 PGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENI 601
PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP + +
Sbjct: 762 PGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAV 821
Query: 602 ESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSV 661
+ +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + +++A
Sbjct: 822 IEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 881
Query: 662 QSPFTNRAFRDPDCETARKELESNH-GDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIE 719
PF + R + N D + +L+ ++ W + ++ ++C+ + +
Sbjct: 882 PEPFISEGKR---LGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLN 938
Query: 720 EQRFYEVTKLRSQFKQVLGDSG-----LITDI---PGPDASL 753
+ + Q K++L +SG L+T + GPD +L
Sbjct: 939 MATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNL 980
Score = 219 (82.2 bits), Expect = 4.2e-63, Sum P(4) = 4.2e-63
Identities = 50/132 (37%), Positives = 79/132 (59%)
Query: 21 QKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF 80
Q E+ L I + + LPV +++ EI++ + + VVI+ G TGCGK+TQ+PQ+++
Sbjct: 367 QLEQDRDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFI 426
Query: 81 QR-------IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKIVFIT 132
Q I TQPRRI+ +S+++RVAYE + GY +RFE R I+F T
Sbjct: 427 QNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCT 486
Query: 133 EGLLLRQ-DSGL 143
G+LLR+ ++G+
Sbjct: 487 VGVLLRKLEAGI 498
Score = 179 (68.1 bits), Expect = 3.5e-36, Sum P(4) = 3.5e-36
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + LS+ + LG + +F +E PP
Sbjct: 759 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 818
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A
Sbjct: 819 DAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAA 878
Query: 927 LNF 929
F
Sbjct: 879 TCF 881
Score = 153 (58.9 bits), Expect = 4.2e-63, Sum P(4) = 4.2e-63
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF II+V GR
Sbjct: 504 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN-CPIIEVYGR 562
Query: 383 LYPIQLEY 390
YP+Q EY
Sbjct: 563 TYPVQ-EY 569
Score = 121 (47.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + EV+I+LMSATI+ +F YF
Sbjct: 504 VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYF 551
Score = 91 (37.1 bits), Expect = 3.7e-27, Sum P(4) = 3.7e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 833 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 881
Score = 91 (37.1 bits), Expect = 3.7e-27, Sum P(4) = 3.7e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 833 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 881
Score = 91 (37.1 bits), Expect = 3.7e-27, Sum P(4) = 3.7e-27
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+D+ + +T LGR L+ LP++ GKM++ G +F+ D + + A F
Sbjct: 833 ALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCF 881
Score = 68 (29.0 bits), Expect = 2.9e-54, Sum P(4) = 2.9e-54
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEV 311
+++DEIHER ++ DFLL V++ ++ + EV
Sbjct: 504 VIVDEIHERDINTDFLLVVLRDVVQAYPEV 533
Score = 58 (25.5 bits), Expect = 3.2e-53, Sum P(4) = 3.2e-53
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 504 VIVDEIHERDINTDFLLVVL 523
Score = 41 (19.5 bits), Expect = 4.2e-63, Sum P(4) = 4.2e-63
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 1151 LHSTAEVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVA 1210
L T E K+ L IN + + + + + ++ DV I +LA G+YP V
Sbjct: 942 LRMTWEAKVQLKEILINSGFPE---DCLLTQVFTNTGPDNNLDVVIS--LLAFGVYPNVC 996
Query: 1211 IGDEFNTSETV--KEALFHCKDKGFVSLHPFS 1240
E T + AL H K V+ PFS
Sbjct: 997 YHKEKRKILTTEGRNALIH---KSSVNC-PFS 1024
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 404 (147.3 bits), Expect = 8.4e-63, Sum P(4) = 8.4e-63
Identities = 100/323 (30%), Positives = 167/323 (51%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYN---EKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
G +L+F+ G + I ++++ Q N + SQ + +LP HS + +EQ +VF PEG+ K
Sbjct: 654 GAILVFLPGWNLIFALMKFLQNTNIFGDTSQ-YQILPCHSQIPRDEQRKVFEPVPEGVTK 712
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
I+STNIAETSITID I FV+D K + + +++ W SK + EQRKGRAGR
Sbjct: 713 IILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRV 772
Query: 543 GPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAEN 600
PG C+ L S ++ L + TPE+ R + + L++ + LG + F LE PP +
Sbjct: 773 RPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDA 832
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
+ + L + +D+ + +T LGR L+ LP++ LGKM+V G++F D + +A+ S
Sbjct: 833 VIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSS 892
Query: 661 VQSPFTNRAFRDPDCETARKELESNH-GDPLTVLNAYKEWLGVK-KDRVRSKKWCKRRGI 718
S + +K L D + ++ A + W K + ++C +G+
Sbjct: 893 TFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGL 952
Query: 719 EEQRFYEVTKLRSQFKQVLGDSG 741
+ + + Q +L +G
Sbjct: 953 QMSTMNVIWDAKQQLLDLLQQAG 975
Score = 230 (86.0 bits), Expect = 8.4e-63, Sum P(4) = 8.4e-63
Identities = 57/140 (40%), Positives = 84/140 (60%)
Query: 14 RTYLDFKQKE-KFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIP 72
R+ D +Q + ++ ++ RE LP+A + EI+ + VVII G+TGCGK+TQI
Sbjct: 362 RSLRDRRQNDNEYRQFLEFRE---KLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIA 418
Query: 73 QYLV-------QAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEK-HRRE 124
QY++ Q G+ I TQPRRI+ IS+++RVA E Q + VGY +RFE R
Sbjct: 419 QYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRP 478
Query: 125 KTKIVFITEGLLLRQ-DSGL 143
I+F T G+LLR+ ++GL
Sbjct: 479 YGAILFCTVGVLLRKLEAGL 498
Score = 173 (66.0 bits), Expect = 5.9e-38, Sum P(4) = 5.9e-38
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPE+ R + + L++ + LG + F LE PP
Sbjct: 771 RVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPV 830
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ + + L + +D+ + +T LGR L+ LP++ LGKM+V G++F D M ++
Sbjct: 831 DAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIM 887
Score = 149 (57.5 bits), Expect = 8.4e-63, Sum P(4) = 8.4e-63
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL +++ ++ + ++ +ILMSATI+ F YF I +++VPGR
Sbjct: 504 IIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFG-ICPVLEVPGR 562
Query: 383 LYPIQ 387
+P+Q
Sbjct: 563 AFPVQ 567
Score = 110 (43.8 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL +++ ++ + ++ +ILMSATI+ F YF
Sbjct: 504 IIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYF 551
Score = 95 (38.5 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 917 IDTMLLLDLALN-FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
+D ++ ++ L +D+ + +T LGR L+ LP++ LGKM+V G++F D M ++
Sbjct: 830 VDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIM 887
Score = 95 (38.5 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 967 IDTMLLLDLALN-FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
+D ++ ++ L +D+ + +T LGR L+ LP++ LGKM+V G++F D M ++
Sbjct: 830 VDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIM 887
Score = 95 (38.5 bits), Expect = 6.2e-30, Sum P(4) = 6.2e-30
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 1017 IDTMLLLDLALN-FGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
+D ++ ++ L +D+ + +T LGR L+ LP++ LGKM+V G++F D M ++
Sbjct: 830 VDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIM 887
Score = 64 (27.6 bits), Expect = 5.8e-54, Sum P(4) = 5.8e-54
Identities = 10/21 (47%), Positives = 18/21 (85%)
Query: 282 LVLDEIHERHLHGDFLLGVIK 302
+++DEIHER ++ DFLL +++
Sbjct: 504 IIVDEIHERDVNSDFLLVILR 524
Score = 59 (25.8 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL ++
Sbjct: 504 IIVDEIHERDVNSDFLLVIL 523
Score = 57 (25.1 bits), Expect = 8.4e-63, Sum P(4) = 8.4e-63
Identities = 36/141 (25%), Positives = 62/141 (43%)
Query: 1193 DVTILKVILASGLYPQVAIGDEFN---TSETVKEALFH-----CKDKGFVSLHPFSVFTS 1244
DV++ +L GLYP + + E T+E+ K AL H C + +PF VF
Sbjct: 998 DVSL--ALLCLGLYPNICVHKEKRKVLTTES-KAALLHKTSVNCSNLAVTFPYPFFVFGE 1054
Query: 1245 QPDVLRIS--EDDIVDPPPGLKLPGRNVISSKHQLLVYMSLLETS-KPFL---VNCLRMP 1298
+ +S + +V P + R + + + ++ + L +P L + L+ P
Sbjct: 1055 KIRTRAVSCKQLSMVSPLQVILFGSRKIDLAANNIVRVDNWLNFDIEPELAAKIGALK-P 1113
Query: 1299 ALQTLLLFSSAIHTNSDFTRL 1319
AL+ L+ + A SD RL
Sbjct: 1114 ALEDLI--TVACDNPSDILRL 1132
Score = 41 (19.5 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 298 LGVIKCLLHSTVEVAADNFLSSYDVLVLDE 327
+G +K L + VA DN D+L L+E
Sbjct: 1108 IGALKPALEDLITVACDN---PSDILRLEE 1134
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 405 (147.6 bits), Expect = 3.1e-62, Sum P(4) = 3.1e-62
Identities = 88/210 (41%), Positives = 125/210 (59%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L +EQ RVF P+G R +++TN+AETS+TI GIR+V DSG+ KE YD
Sbjct: 677 VLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQL 736
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSL 575
+ + + WISKASA QR+GRAGRTGPG C+RLYS Y L E++ PE+ R S++ +
Sbjct: 737 TGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGV 796
Query: 576 LLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIP 635
+L L M L V FPF P +++ S + L A+ + RVT +G +S P+
Sbjct: 797 VLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPR 856
Query: 636 LGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
++L+ G + ++L A LS F
Sbjct: 857 FSRILLLGHQHDCLHYTVTLVAALSAAEIF 886
Score = 238 (88.8 bits), Expect = 3.1e-62, Sum P(4) = 3.1e-62
Identities = 51/118 (43%), Positives = 76/118 (64%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR------- 82
+I+ + +LPV +Q I++ + +V++ G TG GK+TQIPQ+L +AG+
Sbjct: 349 EIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPG 408
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I TQPRR+A +S+SKRVA E L +S VGYQIRFE + T + F+T+G+LLR+
Sbjct: 409 MIGITQPRRVAAVSMSKRVA-EELGDHSQKVGYQIRFEGTVNKDTAVKFMTDGVLLRE 465
Score = 168 (64.2 bits), Expect = 1.9e-36, Sum P(3) = 1.9e-36
Identities = 40/113 (35%), Positives = 61/113 (53%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG C+RLYS Y L E++ PE+ R S++ ++L L M L V FPF P +
Sbjct: 761 RTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERD 820
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTM 920
++ S + L A+ + RVT +G +S P+ ++L+ G HQ D +
Sbjct: 821 SLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLG---HQHDCL 870
Score = 138 (53.6 bits), Expect = 3.1e-62, Sum P(4) = 3.1e-62
Identities = 45/154 (29%), Positives = 80/154 (51%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV----------KIILMSA 359
EVA D L Y +V+DE HER ++ D L+G++ ++ AE+ K+++MSA
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSA 524
Query: 360 TINIELFHTYFNRIAK---IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSII 416
T+ IE N A +++V GR YP+ L + +T + ++ R +S
Sbjct: 525 TLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHF-----ARKTHHDYVEEA--FRKISRG 577
Query: 417 DKKYPRTERGDVLIFMSGISEISSIVRAAQ-EYN 449
KK P G +L+F++G +EI+ + + + ++N
Sbjct: 578 HKKLPP---GGMLVFLTGQNEITQLSKRLKLQFN 608
Score = 96 (38.9 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEV----------KIILMSA 1164
+VA D L Y +V+DE HER ++ D L+G++ ++ AE+ K+++MSA
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSA 524
Query: 1165 TINIE 1169
T+ IE
Sbjct: 525 TLRIE 529
Score = 84 (34.6 bits), Expect = 1.3e-56, Sum P(4) = 1.3e-56
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADN 315
VA D L Y +V+DE HER ++ D L+G++ ++ E+A ++
Sbjct: 466 VAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQED 511
Score = 78 (32.5 bits), Expect = 5.3e-56, Sum P(4) = 5.3e-56
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIVAAD 273
+VA D L Y +++DE HER + D L+G++S + E+ D
Sbjct: 465 EVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQED 511
Score = 63 (27.2 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 51/238 (21%), Positives = 91/238 (38%)
Query: 1018 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSM---FHQIDTMLL- 1072
D+++ + L + A+ + RVT +G +S P+ ++L+ G H T++
Sbjct: 820 DSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAA 879
Query: 1073 LDLALNFVHHSXXXXXXXAGE--RLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVL 1130
L A F+ + A E + + D + E + +Q NF D
Sbjct: 880 LSAAEIFIPENQAIPQLAAKEDDAIRTNDDIQAETKQAAIRRQFNAVNKNFCFLDDKS-- 937
Query: 1131 DEIHERHLHGDFLLGVIK--CLLHSTAEVKIILMSATIN---IELFHTYFNRIAK-DLLS 1184
D I + G+F + C H K++ + + ++L T A +
Sbjct: 938 DAIKMLQVLGEFAHEPTEKWCESHFV-RFKVLKEAQKLRQQIVQLLKTNIPSFANINFQD 996
Query: 1185 GSTARSHKDVTILKVILASGLYPQVAI-GDEFNTSETVKEALFHCKDKGFVSLHPFSV 1241
A + K V LK ++A+G +VAI D+ T T D ++ L P V
Sbjct: 997 KLDAPTEKQVKALKQMVAAGFIDRVAIRADKAPTPPTQFRPPRRAIDVPYIPLSPLVV 1054
Score = 51 (23.0 bits), Expect = 3.1e-62, Sum P(4) = 3.1e-62
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 709 SKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
++KWC+ + + E KLR Q Q+L
Sbjct: 954 TEKWCESHFVRFKVLKEAQKLRQQIVQLL 982
Score = 50 (22.7 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 918 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTM 970
D+++ + L + A+ + RVT +G +S P+ ++L+ G HQ D +
Sbjct: 820 DSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLG---HQHDCL 870
Score = 50 (22.7 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 968 DTMLLLDLALNF-GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTM 1020
D+++ + L + A+ + RVT +G +S P+ ++L+ G HQ D +
Sbjct: 820 DSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLG---HQHDCL 870
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 389 (142.0 bits), Expect = 6.6e-62, Sum P(3) = 6.6e-62
Identities = 93/230 (40%), Positives = 127/230 (55%)
Query: 455 WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYD 514
W VLPL+S LS E+Q+R+F P+G R C+VSTN+AETS+TI I++VVD G+ K YD
Sbjct: 618 W-VLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 515 VTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSID 573
+S + SKASA+QR GRAGR G CYRLYS Y+ ++S P+I++ ++
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 574 SLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAI--------DSKERVTSLGR 625
L+L + CMG+ V FPF P ++++ R L GA+ D VT LG
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGH 796
Query: 626 FLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF-RDPD 674
+S PV GKML + + + L A LSVQ RD D
Sbjct: 797 VISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDED 846
Score = 233 (87.1 bits), Expect = 6.6e-62, Sum P(3) = 6.6e-62
Identities = 48/113 (42%), Positives = 81/113 (71%)
Query: 33 ETQNS---LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR---IACT 86
E QN+ LP+ +Q++++T+ + +VI+AG+TG GK+TQ+PQ+L +AG+ + I T
Sbjct: 252 EVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVT 311
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+PRR+A I++SKRVA+E ++ + V Y IRFE + T+I F+T+G+LL++
Sbjct: 312 EPRRVAAIAMSKRVAHE-MNLPESEVSYLIRFEGNVTPATRIKFMTDGVLLKE 363
Score = 160 (61.4 bits), Expect = 6.6e-62, Sum P(3) = 6.6e-62
Identities = 46/142 (32%), Positives = 77/142 (54%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL---HSTAE-VKIILMSATINIEL 365
E+ D LS Y V++LDE HER ++ D L+G++ ++ H + +K+I+MSAT+ +
Sbjct: 363 EIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSD 422
Query: 366 FHTYFNRIAKI----IKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYP 421
F T R+ KI +KV R +P+ + + RT + + Y + L I K P
Sbjct: 423 F-TENTRLFKIPPPLLKVEARQFPVTIHFQK-----RTPDDYVAEA-YRKTLKI-HNKLP 474
Query: 422 RTERGDVLIFMSGISEISSIVR 443
G +LIF++G E++ +VR
Sbjct: 475 E---GGILIFVTGQQEVNQLVR 493
Score = 151 (58.2 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 41/129 (31%), Positives = 62/129 (48%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G CYRLYS Y+ ++S P+I++ ++ L+L + CMG+ V FPF P
Sbjct: 703 RISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQV 762
Query: 868 NIESSVRSLTQHGAI--------DSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDT 919
++++ R L GA+ D VT LG +S PV GKML + +
Sbjct: 763 QLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPY 822
Query: 920 MLLLDLALN 928
+ L AL+
Sbjct: 823 TVCLVAALS 831
Score = 110 (43.8 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL---HSTAE-VKIILMSATINIEL 1170
++ D LS Y V++LDE HER ++ D L+G++ ++ H + +K+I+MSAT+ +
Sbjct: 363 EIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSD 422
Query: 1171 FHTYFNRIAK 1180
F T R+ K
Sbjct: 423 F-TENTRLFK 431
Score = 98 (39.6 bits), Expect = 2.0e-55, Sum P(3) = 2.0e-55
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ TD LS Y ++ILDE HER +Y D L+G++S
Sbjct: 363 EIETDFLLSKYSVIILDEAHERSVYTDILVGLLS 396
Score = 95 (38.5 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 44/155 (28%), Positives = 63/155 (40%)
Query: 615 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAF-RDP 673
D VT LG +S PV GKML + + + L A LSVQ RD
Sbjct: 786 DLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDE 845
Query: 674 DCETA-----RKE----LESNH---GDPLTVLNAY--KEWLGVKKDRVRSKKWCKRRGIE 719
D RK N+ GDP+ +L A E+ G + R ++C G+
Sbjct: 846 DVAPGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAG---SQGRLPEFCAANGLR 902
Query: 720 EQRFYEVTKLRSQFKQVLGDSGLITDIP-GPDASL 753
++ EV KLR Q + + ++D+ G D L
Sbjct: 903 QKAMSEVRKLRVQLTNEINLN--VSDVELGVDPEL 935
Score = 87 (35.7 bits), Expect = 2.9e-54, Sum P(3) = 2.9e-54
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ LS Y V++LDE HER ++ D L+G++
Sbjct: 364 IETDFLLSKYSVIILDEAHERSVYTDILVGLL 395
Score = 48 (22.0 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 933 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
D VT LG +S PV GKML + + + L AL+
Sbjct: 786 DLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALS 831
Score = 48 (22.0 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 983 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
D VT LG +S PV GKML + + + L AL+
Sbjct: 786 DLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALS 831
Score = 48 (22.0 bits), Expect = 9.6e-26, Sum P(3) = 9.6e-26
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 1033 DSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
D VT LG +S PV GKML + + + L AL+
Sbjct: 786 DLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALS 831
Score = 39 (18.8 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 427 DVLIFMSGISEISSIVRAAQEYNEKSQGW 455
+VLI +G+ + A ++ K Q W
Sbjct: 834 EVLI-ETGVQRDEDVAPGANRFHRKRQSW 861
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 587 (211.7 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 144/427 (33%), Positives = 233/427 (54%)
Query: 318 SSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKII 377
S V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+ A +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDG-APVF 89
Query: 378 KVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISE 437
++PGR +P+ + Y E D ++ + +L I + P GD+L+F++G E
Sbjct: 90 RIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDILVFLTGQEE 139
Query: 438 ISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETS 493
I + Q+ K + +VLP+++ L + Q R+F P G RK +V+TNIAETS
Sbjct: 140 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETS 199
Query: 494 ITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSE 553
+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G C+RLY+
Sbjct: 200 LTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTA 259
Query: 554 EQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHG 612
Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + ++ L G
Sbjct: 260 WAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALG 319
Query: 613 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRD 672
A++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV + R +D
Sbjct: 320 ALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP-KD 378
Query: 673 P--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
+ AR GD L +LN Y +W + S +WC ++ + +R
Sbjct: 379 KVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRSMRRARDVR 434
Query: 731 SQFKQVL 737
Q + +L
Sbjct: 435 EQLEGLL 441
Score = 174 (66.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 306
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 307 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 366
Query: 928 N 928
+
Sbjct: 367 S 367
Score = 71 (30.1 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 277 SSYDVLVLDEIHERHLHGDFLLGVIK 302
S V+++DE HER LH D L G+IK
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIK 56
Score = 60 (26.2 bits), Expect = 1.6e-60, Sum P(3) = 1.6e-60
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 235 SSYDILILDEVHERHLYGDFLLGVI 259
S ++++DE HER L+ D L G+I
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLI 55
Score = 37 (18.1 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 491 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEI 522
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 587 (211.7 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 144/427 (33%), Positives = 233/427 (54%)
Query: 318 SSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKII 377
S V+++DE HER LH D L G+IK + E+K+++ SAT++ F T+F+ A +
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD-APVF 89
Query: 378 KVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISE 437
++PGR +P+ + Y E D ++ + +L I + P GD+L+F++G E
Sbjct: 90 RIPGRRFPVDIFYTKAPEADYLEA------CVVSVLQIHVTQPP----GDILVFLTGQEE 139
Query: 438 ISSIVRAAQE----YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETS 493
I + Q+ K + +VLP+++ L + Q R+F P G RK +V+TNIAETS
Sbjct: 140 IEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETS 199
Query: 494 ITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSE 553
+TI+GI +V+D G K+ SY+ M +L SKASA QR GRAGR G C+RLY+
Sbjct: 200 LTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTA 259
Query: 554 EQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHG 612
Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E + ++ L G
Sbjct: 260 WAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALG 319
Query: 613 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRD 672
A++ +T+ GR +++LPVD L KM++ + + +L++AA+LSV + R +D
Sbjct: 320 ALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRP-KD 378
Query: 673 P--DCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
+ AR GD L +LN Y +W + S +WC ++ + +R
Sbjct: 379 KVVHADNARVNFFLPGGDHLVLLNVYTQWA----ESGYSSQWCYENFVQFRSMRRARDVR 434
Query: 731 SQFKQVL 737
Q + +L
Sbjct: 435 EQLEGLL 441
Score = 174 (66.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
R G C+RLY+ Y L E + PEI+R S+ +++L L +G+ D+ F FL+ PP E
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYE 306
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL 927
+ ++ L GA++ +TT GR +++LPVD L KM++ + + +L + L
Sbjct: 307 TLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAML 366
Query: 928 N 928
+
Sbjct: 367 S 367
Score = 71 (30.1 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 277 SSYDVLVLDEIHERHLHGDFLLGVIK 302
S V+++DE HER LH D L G+IK
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIK 56
Score = 60 (26.2 bits), Expect = 1.6e-60, Sum P(3) = 1.6e-60
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 235 SSYDILILDEVHERHLYGDFLLGVI 259
S ++++DE HER L+ D L G+I
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLI 55
Score = 37 (18.1 bits), Expect = 1.1e-61, Sum P(3) = 1.1e-61
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1266 PGRNVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
P ++ + + L+Y L+ T+K F+ L +
Sbjct: 491 PNSSLFEQQPRWLLYHELVLTTKEFMRQVLEI 522
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 413 (150.4 bits), Expect = 2.2e-61, Sum P(4) = 2.2e-61
Identities = 105/338 (31%), Positives = 174/338 (51%)
Query: 408 PYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQG--WIVLPLHSTLS 465
P+ I +I++ R G VL+F+ G +EI ++ E+ E Q + +LPLHS L+
Sbjct: 642 PFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLT 701
Query: 466 LEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEF 525
+EQ +VF++ P G RK IVSTNIAETSITID + +V+DS K KE Y M
Sbjct: 702 SQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATV 760
Query: 526 WISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLG 585
W SK + QR+GRAGR G + L S+ ++ L ++ T E+ R+ + + L++ + LG
Sbjct: 761 WASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLG 820
Query: 586 DVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
V +F L+ PP + + S L GA+D +TSLG+ L+ +P++ + K+L+ G
Sbjct: 821 SVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILG 880
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESN----HGDPLTVLNAYKEW 699
+ + +A+ +S +PF R +++ N H ++V+ Y+E
Sbjct: 881 TALGAGSVMCDVASAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREA 940
Query: 700 LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
+ + +++C+R + R Q VL
Sbjct: 941 VQMGASAAE-REFCERYSLSNPVLKMTDGARRQLIDVL 977
Score = 237 (88.5 bits), Expect = 2.2e-61, Sum P(4) = 2.2e-61
Identities = 58/136 (42%), Positives = 82/136 (60%)
Query: 18 DFKQKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ 77
DFK+ E L KI + LPVAQY++ I+ TV + RV +I G+TGCGKSTQ+ Q+L++
Sbjct: 364 DFKRGE---ALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLE 420
Query: 78 --------AGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKI 128
A F + +QPRRI+ ISL++RVA E + GY +RF+ R I
Sbjct: 421 SFLENSNGASFNAVV-SQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSI 479
Query: 129 VFITEGLLLRQ-DSGL 143
+F T G+LLR ++GL
Sbjct: 480 MFCTVGVLLRMMENGL 495
Score = 136 (52.9 bits), Expect = 2.2e-61, Sum P(4) = 2.2e-61
Identities = 35/109 (32%), Positives = 61/109 (55%)
Query: 314 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 373
+N L +++DEIHER + DF+L V++ ++ + +++++LMSATI+ +LF +F+ I
Sbjct: 492 ENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSI 551
Query: 374 -----AKIIKVPGRLYPIQLEY---------HPIVELDRTKSEKLDPGP 408
+I + GR +P+Q Y H E D+ K +K P P
Sbjct: 552 PDVGPTPVITMHGRTFPVQSFYLEDILHNLQHMPEEPDQKKRKKGGPPP 600
Score = 136 (52.9 bits), Expect = 8.5e-32, Sum P(4) = 8.5e-32
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R G + L S+ ++ L ++ T E+ R+ + + L++ + LG V +F L+ PP
Sbjct: 776 RVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPY 835
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + S L GA+D +T+LG+ L+ +P++ + K+L+ G+ M + A
Sbjct: 836 DMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASA 895
Query: 927 LNF 929
++F
Sbjct: 896 MSF 898
Score = 118 (46.6 bits), Expect = 7.2e-21, Sum P(3) = 7.2e-21
Identities = 22/60 (36%), Positives = 42/60 (70%)
Query: 1119 DNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRI 1178
+N L +++DEIHER + DF+L V++ ++ + +++++LMSATI+ +LF +F+ I
Sbjct: 492 ENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSI 551
Score = 72 (30.4 bits), Expect = 3.0e-25, Sum P(4) = 3.0e-25
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
GA+D +TSLG+ L+ +P++ + K+L+ G+ M + A++F
Sbjct: 849 GALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSF 898
Score = 72 (30.4 bits), Expect = 3.0e-25, Sum P(4) = 3.0e-25
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
GA+D +TSLG+ L+ +P++ + K+L+ G+ M + A++F
Sbjct: 849 GALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSF 898
Score = 72 (30.4 bits), Expect = 3.0e-25, Sum P(4) = 3.0e-25
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
GA+D +TSLG+ L+ +P++ + K+L+ G+ M + A++F
Sbjct: 849 GALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSF 898
Score = 57 (25.1 bits), Expect = 3.6e-53, Sum P(4) = 3.6e-53
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 282 LVLDEIHERHLHGDFLLGVIK 302
+++DEIHER + DF+L V++
Sbjct: 501 VIIDEIHERDVDTDFVLIVLR 521
Score = 57 (25.1 bits), Expect = 3.6e-53, Sum P(4) = 3.6e-53
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
+N L +I+DE+HER + DF+L V+
Sbjct: 492 ENGLRGISHVIIDEIHERDVDTDFVLIVL 520
Score = 40 (19.1 bits), Expect = 2.2e-61, Sum P(4) = 2.2e-61
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 1192 KDVTILKVILASGLYPQVA 1210
+++ +++ +L LYP VA
Sbjct: 1000 RELNLMRSLLVMALYPNVA 1018
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 436 (158.5 bits), Expect = 4.5e-61, Sum P(4) = 4.5e-61
Identities = 99/277 (35%), Positives = 161/277 (58%)
Query: 447 EYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDS 505
E +EK G + VLPL+STL +Q RVF P G R +V+TN+AETS+TI I++VVD+
Sbjct: 837 EDDEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDT 896
Query: 506 GKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYST 564
G+VK+ Y+ +S+ + W SKASA+QR GRAGRTGPG CYR+YS ++ ++S
Sbjct: 897 GRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSK 956
Query: 565 PEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKE-RVTSL 623
PEI + ID ++L + MG+ + FPF P +++ ++R+L GA++ K +T L
Sbjct: 957 PEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITEL 1016
Query: 624 GRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFR------DPDCET 677
G +S PV KML+ G + + ++++ ++L+V+ PF A+ + D
Sbjct: 1017 GMKMSQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLKEAYEANQNNDENDDNN 1076
Query: 678 ARKELESNHGDPLTVLNAYKEWLGVKKDRVRS--KKW 712
+++++S+ + KE R+R+ +KW
Sbjct: 1077 EKQQIDSSSQSEKEFIEKEKEERQKHLQRLRNSMRKW 1113
Score = 216 (81.1 bits), Expect = 4.5e-61, Sum P(4) = 4.5e-61
Identities = 47/120 (39%), Positives = 74/120 (61%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR------- 82
+I +++LP+ + I++ + VVII G+TG GK+TQ+PQ+L ++GF
Sbjct: 397 EIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFP 456
Query: 83 --IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKT-KIVFITEGLLLRQ 139
I TQPRR+A +S +KRVA E ++ VGYQIR++K KI F+T+G+L+R+
Sbjct: 457 GIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMRE 516
Score = 176 (67.0 bits), Expect = 2.1e-33, Sum P(4) = 2.1e-33
Identities = 38/105 (36%), Positives = 60/105 (57%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYR+YS ++ ++S PEI + ID ++L + MG+ + FPF P
Sbjct: 932 RTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDES 991
Query: 868 NIESSVRSLTQHGAIDSKE-RVTTLGRFLSDLPVDIPLGKMLVFG 911
+++ ++R+L GA++ K +T LG +S PV KML+ G
Sbjct: 992 SLKLALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLG 1036
Score = 129 (50.5 bits), Expect = 4.5e-61, Sum P(4) = 4.5e-61
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVI--------KCLLHSTAE---------- 351
EV D LS Y +++DE HER+L+ D L+G++ K L S A
Sbjct: 516 EVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYLKSLATNKANGTIGVD 575
Query: 352 ----VKIILMSATINIELF---HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKL 404
+K+++MSAT+ +E F T F+R +I +P R +P+ + ++ EL E
Sbjct: 576 MIYPLKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDEC- 634
Query: 405 DPGPYIRILSIIDKKYPRTERGDVLIFMSGISEI 438
Y +++ I K P G +L+F++G EI
Sbjct: 635 ----YKKVVKI-HKNLPS---GGILVFVTGKQEI 660
Score = 95 (38.5 bits), Expect = 3.1e-57, Sum P(5) = 3.1e-57
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIH 329
V D+ LS Y +++DE HER+L+ D L+G LL V + +L S L ++ +
Sbjct: 517 VQTDFLLSQYSSILIDEAHERNLNTDILIG----LLSRIVPLRKKLYLKS---LATNKAN 569
Query: 330 ERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGRLYPIQLE 389
+ D + + ++ +T V+ + T+ F+R +I +P R +P+ +
Sbjct: 570 GT-IGVDMIYPLKLVVMSATLRVEDFTKNKTL--------FSRPPPVINIPTRQFPVTIH 620
Query: 390 YHPIVEL 396
++ EL
Sbjct: 621 FNKKTEL 627
Score = 87 (35.7 bits), Expect = 2.0e-56, Sum P(5) = 2.0e-56
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
+V TD LS Y +++DE HER+L D L+G++S
Sbjct: 516 EVQTDFLLSQYSSILIDEAHERNLNTDILIGLLS 549
Score = 62 (26.9 bits), Expect = 9.4e-22, Sum P(4) = 9.4e-22
Identities = 35/142 (24%), Positives = 57/142 (40%)
Query: 1021 LLLDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
L L +N GA++ K +T LG +S PV KML+ G H ++ +++
Sbjct: 995 LALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLGQE-HNCLPYIIAIVSILT 1053
Query: 1080 VHHSXXXXXXXAGERLESMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHLH 1139
V A + + D N + KQ Q+ D+ S + E ER H
Sbjct: 1054 VKDPFLKEAYEANQNNDENDDN--------NEKQ-QI--DSSSQSEKEFIEKEKEERQKH 1102
Query: 1140 GDFLLGVIKCLLHSTAEVKIIL 1161
L ++ LH +++ IL
Sbjct: 1103 LQRLRNSMRKWLHKESDLLSIL 1124
Score = 61 (26.5 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 921 LLLDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFG 961
L L +N GA++ K +T LG +S PV KML+ G
Sbjct: 995 LALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLG 1036
Score = 61 (26.5 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 971 LLLDLALNFGAIDSKE-RVTSLGRFLSDLPVDIPLGKMLVFG 1011
L L +N GA++ K +T LG +S PV KML+ G
Sbjct: 995 LALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLLLG 1036
Score = 47 (21.6 bits), Expect = 9.4e-61, Sum P(5) = 9.4e-61
Identities = 5/21 (23%), Positives = 17/21 (80%)
Query: 1271 ISSKHQLLVYMSLLETSKPFL 1291
++++ + ++Y ++ETS+P++
Sbjct: 1269 VNTQAEYVIYCDIIETSRPYM 1289
Score = 44 (20.5 bits), Expect = 4.5e-61, Sum P(4) = 4.5e-61
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 1335 KSTADVNQLEHSLTRDLVQFMSSATH 1360
KS +++++L H LT ++V ++ H
Sbjct: 1153 KSMSEIHKLRHQLT-EIVNSINQTNH 1177
Score = 44 (20.5 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 361 INIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIVE 395
I +F+ R +I V L PI LE H IVE
Sbjct: 383 IEYNVFNVKVERKPEIDAVRDNL-PIMLEEHSIVE 416
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 1157 VKIILMSATINIELF---HTYFNR 1177
+K+++MSAT+ +E F T F+R
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSR 603
Score = 40 (19.1 bits), Expect = 9.4e-61, Sum P(5) = 9.4e-61
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 690 LTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
L V+ AY ++K +C + + + E+ KLR Q +++
Sbjct: 1124 LKVVGAYD--YQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQLTEIV 1169
Score = 39 (18.8 bits), Expect = 7.6e-34, Sum P(4) = 7.6e-34
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 22 KEKFSTL-MKIRETQNSLPVAQYKQEIID 49
K KF T + +RE Q ++QY +ID
Sbjct: 504 KIKFMTDGILMREVQTDFLLSQYSSILID 532
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 378 (138.1 bits), Expect = 2.1e-60, Sum P(5) = 2.1e-60
Identities = 87/200 (43%), Positives = 120/200 (60%)
Query: 444 AAQEYNEKSQGWI-VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFV 502
A Q N+ S G + VLPL++ LS Q RVF + R +V+TN+AETS+TI GI++V
Sbjct: 635 AEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYV 694
Query: 503 VDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAE 561
VD+G+VK +YD M + + WIS+ASA QR GRAGRTGPG CYRLYS +S + E
Sbjct: 695 VDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEE 754
Query: 562 YSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVT 621
S PEI +V +D ++L + M + V FPF P I + R L A+DS +T
Sbjct: 755 SSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLT 814
Query: 622 SLGRFLSDLPVDIPLGKMLV 641
LG+ +S P+ +ML+
Sbjct: 815 PLGKAMSHYPMSPRHSRMLL 834
Score = 249 (92.7 bits), Expect = 2.1e-60, Sum P(5) = 2.1e-60
Identities = 50/119 (42%), Positives = 79/119 (66%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF------QR- 82
++ ET+ LP+ +QEI++ + + VII+G TGCGK+TQ+PQ+L +AGF R
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 83 --IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
I TQPRR+A ++ +KRVA+E + VG+Q+R++K E + I F+T+G+LLR+
Sbjct: 293 GIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLRE 351
Score = 169 (64.5 bits), Expect = 1.5e-38, Sum P(4) = 1.5e-38
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLYS +S + E S PEI +V +D ++L + M + V FPF P
Sbjct: 733 RTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPS 792
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLV 909
I + R L A+DS +T LG+ +S P+ +ML+
Sbjct: 793 AIREAERCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
Score = 140 (54.3 bits), Expect = 2.1e-60, Sum P(5) = 2.1e-60
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERH 332
D+ L Y V++LDE HER L+ D L+G +L +++ + + E ++
Sbjct: 355 DFLLRRYSVIILDEAHERSLNTDILIG----MLTRVIKIRQEYY----------EEQQKS 400
Query: 333 LHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHT---YFNRIAKIIKVPGRLYPIQLE 389
L G + T +K+ILMSAT+ +E F + F I +I+VP R YP+ +
Sbjct: 401 LQSG---GTVTSECQITP-LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIH 456
Query: 390 YHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEI 438
+ E+ E Y +++SI KK P+ G +L+F++G E+
Sbjct: 457 FSKKTEIVDYIGEA-----YKKVMSI-HKKLPQ---GGILVFVTGQREV 496
Score = 81 (33.6 bits), Expect = 2.5e-54, Sum P(5) = 2.5e-54
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVI 342
E+ D L Y V++LDE HER L+ D L+G++
Sbjct: 351 EIQNDFLLRRYSVIILDEAHERSLNTDILIGML 383
Score = 79 (32.9 bits), Expect = 4.0e-54, Sum P(5) = 4.0e-54
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++ILDE HER L D L+G+++
Sbjct: 351 EIQNDFLLRRYSVIILDEAHERSLNTDILIGMLT 384
Score = 55 (24.4 bits), Expect = 2.1e-60, Sum P(5) = 2.1e-60
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 1269 NVISSKHQLLVYMSLLETSKPFLVNCLRM 1297
++I+S +LLVY LL T++P++ R+
Sbjct: 1045 SLINSAPELLVYSELLLTNRPYMHGATRV 1073
Score = 50 (22.7 bits), Expect = 3.9e-51, Sum P(5) = 3.9e-51
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 415 IIDKKYPRTERGDVLIFMSGISEISSIVRAAQEYNEKSQ 453
I+D+ + R+ D+LI M ++ +++ QEY E+ Q
Sbjct: 365 ILDEAHERSLNTDILIGM-----LTRVIKIRQEYYEEQQ 398
Score = 46 (21.3 bits), Expect = 6.3e-20, Sum P(4) = 6.3e-20
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 1157 VKIILMSATINIELF 1171
+K+ILMSAT+ +E F
Sbjct: 416 LKLILMSATLRVEDF 430
Score = 43 (20.2 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 959
A+DS +T LG+ +S P+ +ML+
Sbjct: 806 ALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
Score = 43 (20.2 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1009
A+DS +T LG+ +S P+ +ML+
Sbjct: 806 ALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
Score = 43 (20.2 bits), Expect = 1.3e-25, Sum P(4) = 1.3e-25
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLV 1059
A+DS +T LG+ +S P+ +ML+
Sbjct: 806 ALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
Score = 41 (19.5 bits), Expect = 2.1e-60, Sum P(5) = 2.1e-60
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 671 RDPDCETARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLR 730
R + AR + D LTV A + V ++ + +C+ G+ + E++KL+
Sbjct: 899 RKEKIKAARDRFSNPSSDALTVAYALHSF-EVSENGMG---FCEANGLHLKTMDEMSKLK 954
Query: 731 SQFKQVL 737
Q +++
Sbjct: 955 DQLLRLV 961
Score = 37 (18.1 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 458 LPLHSTLSLEEQDR 471
LP HS E++DR
Sbjct: 1121 LPAHSVAITEDRDR 1134
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 429 (156.1 bits), Expect = 2.8e-60, Sum P(3) = 2.8e-60
Identities = 87/211 (41%), Positives = 132/211 (62%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L ++Q +VF P G R CIV+TN+AETS+TI GIR+VVD G+ KE Y+
Sbjct: 773 VLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQE 832
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSL 575
+ + + W+SKASA QR GRAGRTGPG CYRLYS + ++S PEI R+ +S+
Sbjct: 833 NGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESI 892
Query: 576 LLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKER-VTSLGRFLSDLPVDI 634
+LS+ MG+ + FPF P +++ + L GA+D +++ +T LG+ +S P+
Sbjct: 893 VLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFPLSP 952
Query: 635 PLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
K+L+ G+ + ++++ + LSV PF
Sbjct: 953 RFAKILIIGNQQECLSYIIAIVSALSVGDPF 983
Score = 199 (75.1 bits), Expect = 2.8e-60, Sum P(3) = 2.8e-60
Identities = 49/130 (37%), Positives = 80/130 (61%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-------- 82
I++ + LPV + I++ V +I+ G+TG GK+TQ+PQ+L +AGF
Sbjct: 436 IQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG 495
Query: 83 -IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE---KHRREK--TKIVFITEGLL 136
I TQPRR+A +S+++RV E L + + VGYQIRF+ K+ ++ T + F+T+G+L
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSE-LGDHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 137 LRQDSGLITD 146
LR+ ++TD
Sbjct: 555 LRE---MMTD 561
Score = 187 (70.9 bits), Expect = 4.0e-34, Sum P(3) = 4.0e-34
Identities = 40/124 (32%), Positives = 70/124 (56%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RTGPG CYRLYS + ++S PEI R+ +S++LS+ MG+ + FPF P
Sbjct: 857 RTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRF 916
Query: 868 NIESSVRSLTQHGAIDSKER-VTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+++ + L GA+D +++ +T LG+ +S P+ K+L+ G+ + ++ + A
Sbjct: 917 SLKKAEELLVILGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSA 976
Query: 927 LNFG 930
L+ G
Sbjct: 977 LSVG 980
Score = 138 (53.6 bits), Expect = 2.8e-60, Sum P(3) = 2.8e-60
Identities = 46/174 (26%), Positives = 85/174 (48%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL------HST-----AEVKIILMS 358
E+ D L+ Y +++DE HER+++ D L+G++ ++ H +K+I+MS
Sbjct: 557 EMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMS 616
Query: 359 ATINIELFH---TYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSI 415
AT+ + F F II V R YP+ + ++ +T + L+ +
Sbjct: 617 ATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNK-----KTNYDYLEEA--FKKTCK 669
Query: 416 IDKKYPRTERGDVLIFMSGISEISSIVRAA-QEYNEKSQGWIVLPLHSTLSLEE 468
I +K P G +LIF++G +EI+++V+ QE+ K + I + + L E
Sbjct: 670 IHRKLPE---GGILIFLTGQNEITTLVKKLRQEFPFKKKSTIQYDENIDVKLSE 720
Score = 81 (33.6 bits), Expect = 6.4e-13, Sum P(3) = 6.4e-13
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL------HST-----AEVKIILMS 1163
++ D L+ Y +++DE HER+++ D L+G++ ++ H +K+I+MS
Sbjct: 557 EMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMS 616
Query: 1164 ATINIELF 1171
AT+ + F
Sbjct: 617 ATLRVSDF 624
Score = 79 (32.9 bits), Expect = 4.1e-54, Sum P(3) = 4.1e-54
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
D+ L+ Y +++DE HER+++ D L+G++
Sbjct: 561 DFLLAKYSAIIIDEAHERNINTDILIGML 589
Score = 79 (32.9 bits), Expect = 4.1e-54, Sum P(3) = 4.1e-54
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ TD L+ Y +I+DE HER++ D L+G+++
Sbjct: 557 EMMTDFLLAKYSAIIIDEAHERNINTDILIGMLT 590
Score = 73 (30.8 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 57/244 (23%), Positives = 101/244 (41%)
Query: 1024 DLALNFGAIDSKER-VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHH 1082
+L + GA+D +++ +T LG+ +S P+ K+L+ G+ + ++ + AL
Sbjct: 923 ELLVILGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSAL----- 977
Query: 1083 SXXXXXXXAGERLESM-DANEVEFRLK--HDP---KQVQVAADNFLSSYDVLVLDEIHER 1136
S E + +M D EFR K H ++ +++ + V D + +
Sbjct: 978 SVGDPFIGENELVGNMNDEARREFRTKFYHSRALFSKLDASSNCMMLLSAVCAYDHVPKE 1037
Query: 1137 HLHGDFLLGVIKCLLHSTAEVKIILMSATINI-ELFHTYFNRIAKDLLSGSTARSHKDVT 1195
+G FL L H E L NI E + + + + K V+
Sbjct: 1038 EQNG-FLQK--HYLRHKMMEEIQKLRKQVGNIVENMIMSADGLQLEQKVKLPIPNKKQVS 1094
Query: 1196 ILKVILASGLYPQVAI-GDEFNTSETV--KEALF---HC-----KDKGFVSLHPFSVFTS 1244
+K ++ASG QVAI GD ++ V K ++ +C +D FV LHP S+
Sbjct: 1095 AMKQMIASGFIDQVAIRGDLISSEVKVANKTSIINIPYCPVMPIEDGPFVYLHPNSLIAE 1154
Query: 1245 QPDV 1248
+
Sbjct: 1155 SGQI 1158
Score = 66 (28.3 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 924 DLALNFGAIDSKER-VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 980
+L + GA+D +++ +T LG+ +S P+ K+L+ G+ + ++ + AL+ G
Sbjct: 923 ELLVILGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVG 980
Score = 66 (28.3 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 974 DLALNFGAIDSKER-VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFG 1030
+L + GA+D +++ +T LG+ +S P+ K+L+ G+ + ++ + AL+ G
Sbjct: 923 ELLVILGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVG 980
Score = 38 (18.4 bits), Expect = 9.7e-19, Sum P(3) = 9.7e-19
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 1203 SGLYPQVAIGDEFNTSETVKEALFHCKDKGFVSLHPFSVFTSQPDVLRISEDDIVDPPPG 1262
+G+ G+E E E K+ L+ +++ P ++ + DPPPG
Sbjct: 738 AGILDDYEEGEENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFE--DPPPG 795
Query: 1263 LKL 1265
++
Sbjct: 796 SRI 798
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 564 (203.6 bits), Expect = 1.0e-59, Sum P(3) = 1.0e-59
Identities = 143/470 (30%), Positives = 255/470 (54%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 76 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 132
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 133 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 185
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 186 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 245
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQE 524
+ ++Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 246 TTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEV 305
Query: 525 FWISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMG 583
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+
Sbjct: 306 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 365
Query: 584 LGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFG 643
+ DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++
Sbjct: 366 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 425
Query: 644 SMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LG 701
+ D +L +AA+LSV++ F DP+ + KE E H + + ++ L
Sbjct: 426 ASLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLA 480
Query: 702 VKKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
V ++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 481 VIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 530
Score = 164 (62.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 322 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 381
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 382 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 414
Score = 74 (31.1 bits), Expect = 1.0e-59, Sum P(3) = 1.0e-59
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 81 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 115
Score = 68 (29.0 bits), Expect = 4.4e-59, Sum P(3) = 4.4e-59
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 84 DPNLTKFSVIILDEAHERTLTTDILFGLL 112
Score = 40 (19.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 161 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 197
Score = 39 (18.8 bits), Expect = 1.0e-59, Sum P(3) = 1.0e-59
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 87 QPRRIACISLSKRVAYETLSQYSNLVG-YQIRFEKHR--REKTKIVFITEGLLLRQDSG 142
Q R++ + ++ R SQ + I+ ++ + + +T I ++T+G LL+ G
Sbjct: 25 QEERLSAVCIADREEKGCTSQEGGTTPTFPIQKQRKKIIQAETAIKYMTDGCLLKHILG 83
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 357 (130.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 84/225 (37%), Positives = 126/225 (56%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
+L L+S+L ++Q +F P RK I+STNIAETS+TI I++V+DSGKVK +DV
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+ L+ ISK SA QR GRAGR PG YR+Y++E+Y + + PEI R + +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPL 636
L L M + + +F F E P E S + L + AID +T LG+ L P++
Sbjct: 522 LELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIY 581
Query: 637 GKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
+L+ F+ ID + ++ A+L+ S F N F + D +T +
Sbjct: 582 ANILLCSIEFNCIDEIATIVALLNCDSIFLNYNFYE-DLDTLNND 625
Score = 178 (67.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L Y L+LDEIHER + D LLG K LL ++KIILMSAT +I +F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 370 FNRIAKIIKVPGRLYPIQLEYHP 392
FN II +P +L+ I + Y+P
Sbjct: 189 FNN-PPIITIPHKLHKITI-YYP 209
Score = 152 (58.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L Y L+LDEIHER + D LLG K LL ++KIILMSAT +I +F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 1175 FN 1176
FN
Sbjct: 189 FN 190
Score = 143 (55.4 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG YR+Y++E+Y + + PEI R + + L L M + + +F F E P E
Sbjct: 486 REAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKEL 545
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
S + L + AID +T LG+ L P++ +L+ F+ ID + + LN
Sbjct: 546 FVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLN 605
Query: 929 FGAI 932
+I
Sbjct: 606 CDSI 609
Score = 116 (45.9 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR 82
LP+ +YK EI + K ++II G+TGCGK+TQ+PQ + + F +
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDK 48
Score = 115 (45.5 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 81 QRIACTQPRRIACISLSKRVAYETL-SQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+++ + PRR+A I++++RV+ E N VGY IRF+ +KT+I F+T+G+L+R+
Sbjct: 70 KKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIRE 129
Score = 92 (37.4 bits), Expect = 1.8e-50, Sum P(6) = 1.8e-50
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDE 327
D L Y L+LDEIHER + D LLG K LL ++ +++D+ + ++
Sbjct: 133 DPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQ 187
Score = 78 (32.5 bits), Expect = 4.8e-49, Sum P(6) = 4.8e-49
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLG 257
++ D L Y LILDE+HER + D LLG
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLG 159
Score = 63 (27.2 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 678 ARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
AR++L GD LT+L+ + W + D K +C + + +V K++ Q +++
Sbjct: 704 ARRKLIHPDGDHLTLLHIFYLWQ--EADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIM 761
Query: 738 GDSGLITDIP 747
+ I +IP
Sbjct: 762 KNKMKI-EIP 770
Score = 51 (23.0 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 391 HPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSI 441
H I E+D + + D I I KK GD+L+F+ G EI +
Sbjct: 283 HDINEIDEQNNLQTDNISMNNINEDI-KKTEDKSLGDILVFLPGQEEIEMV 332
Score = 51 (23.0 bits), Expect = 3.7e-24, Sum P(5) = 3.7e-24
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
+ AID +T LG+ L P++ +L+ F+ ID + + LN +I
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSI 609
Score = 51 (23.0 bits), Expect = 3.7e-24, Sum P(5) = 3.7e-24
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
+ AID +T LG+ L P++ +L+ F+ ID + + LN +I
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSI 609
Score = 49 (22.3 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+ AID +T LG+ L P++ +L+ F+ ID + + LN
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLN 605
Score = 39 (18.8 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 6 YEEWKLLLRTYLDFKQKEKFSTL-MKIRETQNSLPVAQYKQEIIDTVLKERVV 57
Y + + + K + KF T + IRE N + +YK I+D + ER +
Sbjct: 101 YVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEI-HERSI 152
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 357 (130.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 84/225 (37%), Positives = 126/225 (56%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
+L L+S+L ++Q +F P RK I+STNIAETS+TI I++V+DSGKVK +DV
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+ L+ ISK SA QR GRAGR PG YR+Y++E+Y + + PEI R + +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPL 636
L L M + + +F F E P E S + L + AID +T LG+ L P++
Sbjct: 522 LELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIY 581
Query: 637 GKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKE 681
+L+ F+ ID + ++ A+L+ S F N F + D +T +
Sbjct: 582 ANILLCSIEFNCIDEIATIVALLNCDSIFLNYNFYE-DLDTLNND 625
Score = 178 (67.7 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 369
E+ D L Y L+LDEIHER + D LLG K LL ++KIILMSAT +I +F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 370 FNRIAKIIKVPGRLYPIQLEYHP 392
FN II +P +L+ I + Y+P
Sbjct: 189 FNN-PPIITIPHKLHKITI-YYP 209
Score = 152 (58.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTY 1174
++ D L Y L+LDEIHER + D LLG K LL ++KIILMSAT +I +F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 1175 FN 1176
FN
Sbjct: 189 FN 190
Score = 143 (55.4 bits), Expect = 1.8e-33, Sum P(5) = 1.8e-33
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R PG YR+Y++E+Y + + PEI R + + L L M + + +F F E P E
Sbjct: 486 REAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKEL 545
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 928
S + L + AID +T LG+ L P++ +L+ F+ ID + + LN
Sbjct: 546 FVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLN 605
Query: 929 FGAI 932
+I
Sbjct: 606 CDSI 609
Score = 116 (45.9 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR 82
LP+ +YK EI + K ++II G+TGCGK+TQ+PQ + + F +
Sbjct: 4 LPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDK 48
Score = 115 (45.5 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 81 QRIACTQPRRIACISLSKRVAYETL-SQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
+++ + PRR+A I++++RV+ E N VGY IRF+ +KT+I F+T+G+L+R+
Sbjct: 70 KKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIRE 129
Score = 92 (37.4 bits), Expect = 1.8e-50, Sum P(6) = 1.8e-50
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDE 327
D L Y L+LDEIHER + D LLG K LL ++ +++D+ + ++
Sbjct: 133 DPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQ 187
Score = 78 (32.5 bits), Expect = 4.8e-49, Sum P(6) = 4.8e-49
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLG 257
++ D L Y LILDE+HER + D LLG
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLG 159
Score = 63 (27.2 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 678 ARKELESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
AR++L GD LT+L+ + W + D K +C + + +V K++ Q +++
Sbjct: 704 ARRKLIHPDGDHLTLLHIFYLWQ--EADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIM 761
Query: 738 GDSGLITDIP 747
+ I +IP
Sbjct: 762 KNKMKI-EIP 770
Score = 51 (23.0 bits), Expect = 2.9e-59, Sum P(6) = 2.9e-59
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 391 HPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSI 441
H I E+D + + D I I KK GD+L+F+ G EI +
Sbjct: 283 HDINEIDEQNNLQTDNISMNNINEDI-KKTEDKSLGDILVFLPGQEEIEMV 332
Score = 51 (23.0 bits), Expect = 3.7e-24, Sum P(5) = 3.7e-24
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 982
+ AID +T LG+ L P++ +L+ F+ ID + + LN +I
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSI 609
Score = 51 (23.0 bits), Expect = 3.7e-24, Sum P(5) = 3.7e-24
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAI 1032
+ AID +T LG+ L P++ +L+ F+ ID + + LN +I
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSI 609
Score = 49 (22.3 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+ AID +T LG+ L P++ +L+ F+ ID + + LN
Sbjct: 552 MLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLN 605
Score = 39 (18.8 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 6 YEEWKLLLRTYLDFKQKEKFSTL-MKIRETQNSLPVAQYKQEIIDTVLKERVV 57
Y + + + K + KF T + IRE N + +YK I+D + ER +
Sbjct: 101 YVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEI-HERSI 152
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 379 (138.5 bits), Expect = 7.6e-59, Sum P(5) = 7.6e-59
Identities = 87/235 (37%), Positives = 132/235 (56%)
Query: 446 QEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDS 505
+E ++ S VLPL+S L+ E+Q +VF P G R C+V+TN+AETS+TI GI++VVD
Sbjct: 568 EEKSDSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDC 627
Query: 506 GKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTP 565
GKVK+ YD +S+ + WIS+ASA QR GRAGRT PG CYRLYS + ++S P
Sbjct: 628 GKVKKRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAP 687
Query: 566 EIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDS-------KE 618
EI + ++ L+L + + + V FPF PP E + ++ L GA+ KE
Sbjct: 688 EITKRPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKE 747
Query: 619 R--------VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+ ++ LGR ++ PV KML + +++ + ++V+ F
Sbjct: 748 QQAAKLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 230 (86.0 bits), Expect = 7.6e-59, Sum P(5) = 7.6e-59
Identities = 45/114 (39%), Positives = 80/114 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+I+E + LP+ +Q I++ + + +V+I G+TG GK+TQ+PQ+L +AG+ I
Sbjct: 234 EIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGI 293
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +S+S+RVA E ++ +V YQIR+E + ++T+I F+T+G+LL++
Sbjct: 294 TEPRRVAAVSMSQRVAKE-MNLSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKE 346
Score = 147 (56.8 bits), Expect = 7.6e-59, Sum P(5) = 7.6e-59
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 365
EV D LS Y V+++DE HER ++ D L+G++ ++ + +K+I+MSAT+ +E
Sbjct: 346 EVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVED 405
Query: 366 F--HT-YFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F +T F +++V R +P+ + ++ LD E R + I + P
Sbjct: 406 FTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGE------CFRKVCKIHRMLPS 459
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ S+ R
Sbjct: 460 ---GGILVFLTGQAEVHSLCR 477
Score = 130 (50.8 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + ++S PEI + ++ L+L + + + V FPF PP E
Sbjct: 663 RTEPGHCYRLYSSAVFMDFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTEA 722
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRF----LSDLPVDI-PLGKML 908
+ ++ L GA+ KE T GR + L I PLG+++
Sbjct: 723 LAAAEELLIALGAL--KEPPMT-GRLKEQQAAKLSCPISPLGRVM 764
Score = 92 (37.4 bits), Expect = 3.6e-53, Sum P(5) = 3.6e-53
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
+V D LS Y ++I+DE HER +Y D L+G++S
Sbjct: 346 EVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLS 379
Score = 86 (35.3 bits), Expect = 1.5e-52, Sum P(5) = 1.5e-52
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
V D+ LS Y V+++DE HER ++ D L+G++
Sbjct: 347 VQKDFLLSKYKVIIIDEAHERSMYTDILIGLL 378
Score = 52 (23.4 bits), Expect = 7.6e-59, Sum P(5) = 7.6e-59
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 711 KWCKRRGIEEQRFYEVTKLRSQF----KQVLGDSGLITD 745
K+C+ G+ + E+ +LR Q V D+GL D
Sbjct: 862 KFCEENGLRYKAMLEIRRLRGQLTTAVNSVCTDAGLYVD 900
Score = 37 (18.1 bits), Expect = 7.6e-59, Sum P(5) = 7.6e-59
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
++D P + P + + +VY ++ET+K ++
Sbjct: 948 LLDDPVFIH-PSSVLFKQLPEFVVYQEIVETTKLYM 982
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 380 (138.8 bits), Expect = 7.8e-59, Sum P(4) = 7.8e-59
Identities = 88/224 (39%), Positives = 127/224 (56%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L+ E+Q +VF PEG R C+V+TN+AETS+TI GI++VVD GKVK+ YD
Sbjct: 588 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 647
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+S+ + W+S+ASA+QR GRAGRT PG CYRLYS + +Y PEI R ++ L+
Sbjct: 648 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVEDLI 707
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSK---ERV------------T 621
L + + + V FPF P E + ++ L GA+ + ERV T
Sbjct: 708 LQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSCPIT 767
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
LGR ++ PV KML + +++ A ++V+ F
Sbjct: 768 ELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF 811
Score = 231 (86.4 bits), Expect = 7.8e-59, Sum P(4) = 7.8e-59
Identities = 46/114 (40%), Positives = 80/114 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+++E + LP+ +Q I++ V + +VII G+TG GK+TQ+PQ+L +AG+ I
Sbjct: 242 EMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGV 301
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +++S+RVA E ++ +V YQIR+E + E+T+I F+T+G+LL++
Sbjct: 302 TEPRRVAAVAMSQRVAKE-MNLSPRVVSYQIRYEGNVTEETRIKFMTDGVLLKE 354
Score = 149 (57.5 bits), Expect = 7.8e-59, Sum P(4) = 7.8e-59
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK---CLLHST-AEVKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ CL +K+++MSAT+ +E
Sbjct: 354 EIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVED 413
Query: 366 F---HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F F + +IKV R +P+ + ++ RT E G R + I + P
Sbjct: 414 FTQNQRLFTQPPPVIKVESRQFPVTVHFNK-----RTPLEDYS-GECFRKVCKIHRMLPA 467
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ ++ R
Sbjct: 468 ---GGILVFLTGQAEVHALCR 485
Score = 130 (50.8 bits), Expect = 1.1e-31, Sum P(5) = 1.1e-31
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + +Y PEI R ++ L+L + + + V FPF P E
Sbjct: 672 RTEPGHCYRLYSSAVFGDFEKYPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEA 731
Query: 869 IESSVRSLTQHGAIDSK---ERVTTLGRFLSDLPVDIPLGKML 908
+ ++ L GA+ + ERV L R P+ LG+ +
Sbjct: 732 LIAAEELLIALGALQAPPKTERVKQLQRSRLSCPIT-ELGRTM 773
Score = 101 (40.6 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIK---CLLHST-AEVKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ CL +K+++MSAT+ +E
Sbjct: 354 EIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVED 413
Query: 1171 F 1171
F
Sbjct: 414 F 414
Score = 83 (34.3 bits), Expect = 5.6e-52, Sum P(4) = 5.6e-52
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++I+DE HER +Y D L+G++S
Sbjct: 354 EIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLS 387
Score = 77 (32.2 bits), Expect = 2.3e-51, Sum P(4) = 2.3e-51
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D L+G++
Sbjct: 355 IQKDFLLLKYKVVIIDEAHERSVYTDILIGLL 386
Score = 56 (24.8 bits), Expect = 1.4e-24, Sum P(4) = 1.4e-24
Identities = 39/171 (22%), Positives = 69/171 (40%)
Query: 593 LEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTV 652
L+APP V+ L Q + +T LGR ++ PV KML +
Sbjct: 745 LQAPPKTE---RVKQL-QRSRLSCP--ITELGRTMATFPVAPRYAKMLALSRQHGCLPYT 798
Query: 653 LSLAAVLSVQSPFT--NR-AFRDPDC-----ETAR----KELESNHGDPLTV--LNAYKE 698
+++ A ++V+ F +R A D + + AR K + + G L + L
Sbjct: 799 ITIVAAMTVRELFEELDRPAASDEELARLKGKRARVAQMKRIWAGQGASLKLGDLMVLLG 858
Query: 699 WLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLG----DSGLITD 745
+G + S ++C+ G+ + E+ +LR Q ++GL D
Sbjct: 859 AVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQLTTAANTMCPEAGLFVD 909
Score = 42 (19.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 1270 VISSKHQLLVYMSLLETSKPFLVNCLRMPA-LQTLLLFSSAIHTNSDFTR 1318
+I H+ VY +L +V CLR L LL SA DFT+
Sbjct: 368 IIDEAHERSVYTDILIGLLSRIV-CLREKRHLPLKLLIMSATLRVEDFTQ 416
Score = 40 (19.1 bits), Expect = 7.8e-59, Sum P(4) = 7.8e-59
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL--VNCLRMPALQTLL 1304
++D P + P + + +VY ++ET+K ++ V+ + M + LL
Sbjct: 957 LLDDPVFIH-PSSVLFKELPEFVVYQEIVETTKMYMKGVSTVDMQWIPVLL 1006
Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(5) = 1.1e-31
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 938 VTSLGRFLSDLPVDIPLGKML 958
+T LGR ++ PV KML
Sbjct: 766 ITELGRTMATFPVAPRYAKML 786
Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(5) = 1.1e-31
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 988 VTSLGRFLSDLPVDIPLGKML 1008
+T LGR ++ PV KML
Sbjct: 766 ITELGRTMATFPVAPRYAKML 786
Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(5) = 1.1e-31
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1038 VTSLGRFLSDLPVDIPLGKML 1058
+T LGR ++ PV KML
Sbjct: 766 ITELGRTMATFPVAPRYAKML 786
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 382 (139.5 bits), Expect = 9.3e-59, Sum P(4) = 9.3e-59
Identities = 85/224 (37%), Positives = 129/224 (57%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L+ E+Q +VF PEG R C+V+TN+AETS+TI GI++VVD GKVK+ YD
Sbjct: 584 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 643
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+S+ + W+S+ASA+QR GRAGRT PG CYRLYS +S ++ PEI R ++ L+
Sbjct: 644 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEITRRPVEDLI 703
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKER---------------VT 621
L + + + V FPF P E + ++ L GA+ + ++ +T
Sbjct: 704 LQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGCPIT 763
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+LGR ++ PV KML + +++ A ++V+ F
Sbjct: 764 ALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 807
Score = 233 (87.1 bits), Expect = 9.3e-59, Sum P(4) = 9.3e-59
Identities = 48/115 (41%), Positives = 81/115 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+++E + LP+ +Q I++ V + +VI+ G+TG GK+TQ+PQ+L +AG+ I
Sbjct: 238 EMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGI 297
Query: 86 TQPRRIACISLSKRVAYE-TLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +++S+RVA E LSQ +V YQIR+E + E+T+I F+T+G+LL++
Sbjct: 298 TEPRRVAAVAMSQRVAKEMNLSQ--RVVSYQIRYEGNVTEETRIKFMTDGVLLKE 350
Score = 144 (55.7 bits), Expect = 9.3e-59, Sum P(4) = 9.3e-59
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 350 EIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVED 409
Query: 366 F---HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F F + +IKV R +P+ + ++ RT E G R + I + P
Sbjct: 410 FTQNQRLFPQPPPVIKVESRQFPVTVHFNK-----RTPLEDYS-GECFRKVCKIHRMLPA 463
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ ++ R
Sbjct: 464 ---GGILVFLTGQAEVHALCR 481
Score = 127 (49.8 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS +S ++ PEI R ++ L+L + + + V FPF P E
Sbjct: 668 RTEPGHCYRLYSSAVFSDFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEA 727
Query: 869 IESSVRSLTQHGAIDSKER---------------VTTLGRFLSDLPVDIPLGKML 908
+ ++ L GA+ + ++ +T LGR ++ PV KML
Sbjct: 728 LIAAEELLIALGALQAPQKTESVKQLQRSWLGCPITALGRTMATFPVAPRYAKML 782
Score = 98 (39.6 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 350 EIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVED 409
Query: 1171 F 1171
F
Sbjct: 410 F 410
Score = 80 (33.2 bits), Expect = 4.1e-52, Sum P(4) = 4.1e-52
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++++DE HER +Y D L+G++S
Sbjct: 350 EIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLS 383
Score = 74 (31.1 bits), Expect = 1.7e-51, Sum P(4) = 1.7e-51
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D L+G++
Sbjct: 351 IQKDFLLLRYKVVLIDEAHERSVYTDILIGLL 382
Score = 63 (27.2 bits), Expect = 5.3e-25, Sum P(4) = 5.3e-25
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFT--NRA-------- 669
+T+LGR ++ PV KML + +++ A ++V+ F +R
Sbjct: 762 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELFEELDRPAASDEELG 821
Query: 670 -FRDPDCETAR-KELESNHGDPLTV--LNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+D A+ K + + G L + + +G + RS ++C+ G+ + E
Sbjct: 822 QLKDKRARVAQMKRIWAGQGASLKLGDIMVLLGAVGACEYSGRSPQFCEANGLRYKAMME 881
Query: 726 VTKLRSQF----KQVLGDSGLITD 745
+ +LR Q V ++GL D
Sbjct: 882 IRRLRGQLTTAVNTVCPEAGLFMD 905
Score = 41 (19.5 bits), Expect = 9.3e-23, Sum P(4) = 9.3e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 938 VTSLGRFLSDLPVDIPLGKML 958
+T+LGR ++ PV KML
Sbjct: 762 ITALGRTMATFPVAPRYAKML 782
Score = 41 (19.5 bits), Expect = 9.3e-23, Sum P(4) = 9.3e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 988 VTSLGRFLSDLPVDIPLGKML 1008
+T+LGR ++ PV KML
Sbjct: 762 ITALGRTMATFPVAPRYAKML 782
Score = 41 (19.5 bits), Expect = 9.3e-23, Sum P(4) = 9.3e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1038 VTSLGRFLSDLPVDIPLGKML 1058
+T+LGR ++ PV KML
Sbjct: 762 ITALGRTMATFPVAPRYAKML 782
Score = 40 (19.1 bits), Expect = 9.3e-59, Sum P(4) = 9.3e-59
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL--VNCLRMPALQTLL 1304
++D P + P + + +VY ++ET+K ++ V+ + + + LL
Sbjct: 953 LLDDPVFIH-PSSVLFKELPEFVVYQEIMETTKMYMKGVSAVEVQWIPVLL 1002
Score = 40 (19.1 bits), Expect = 9.3e-59, Sum P(4) = 9.3e-59
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 1190 SHKDVTILKVILASGLYPQVA--IGDEFNTSETVKEALFHCKDKGFVSLHPFSV-FTSQP 1246
S VT L+ I+A+GL +A + E + K A V +HP SV F P
Sbjct: 912 SESQVTYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVFIHPSSVLFKELP 971
Query: 1247 DVLRISE 1253
+ + E
Sbjct: 972 EFVVYQE 978
Score = 39 (18.8 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 1227 HCKDKGFVSLHPFSVF 1242
+C +KG V H SVF
Sbjct: 1019 YCPEKGRVLCHRASVF 1034
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 383 (139.9 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 94/261 (36%), Positives = 140/261 (53%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L+ E+Q +VF PEG R C+++TN+AETS+TI GI++VVD GKVK+ YD
Sbjct: 583 VLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 642
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+S+ + W+S+ASA+QR GRAGRT PG CYRLYS + ++ PEI R ++ L+
Sbjct: 643 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 702
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAIDS---KER------------VT 621
L + + + V FPF P E + ++ L GA+ + +ER +T
Sbjct: 703 LQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSCPIT 762
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETA-RK 680
+LGR +S PV KML + +++ A ++V+ F + D A +
Sbjct: 763 ALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRE-----LFEELDRPAASEE 817
Query: 681 ELESNHGDPLTVLNAYKEWLG 701
EL G V + W G
Sbjct: 818 ELAELKGRRTRVAQMKRTWAG 838
Score = 230 (86.0 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 45/114 (39%), Positives = 80/114 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+++E + LP+ +Q I++ V + +VI+ G+TG GK+TQ+PQ+L +AG+ I
Sbjct: 240 EMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGV 299
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +++S+RVA E ++ +V YQIR+E + E+T+I F+T+G+LL++
Sbjct: 300 TEPRRVAAVAMSQRVAKE-MNLSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKE 352
Score = 147 (56.8 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D LLG++ ++ A+ +K+++MSAT+ +E
Sbjct: 352 EIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVED 411
Query: 366 F---HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F F +IKV R +P+ + ++ LD E R + I + P
Sbjct: 412 FTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGE------CFRKVCKIHRMLPA 465
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ ++ R
Sbjct: 466 ---GGILVFLTGQAEVHALCR 483
Score = 127 (49.8 bits), Expect = 2.5e-31, Sum P(4) = 2.5e-31
Identities = 37/115 (32%), Positives = 54/115 (46%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + ++ PEI R ++ L+L + + + V FPF P E
Sbjct: 667 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEA 726
Query: 869 IESSVRSLTQHGAIDS---KER------------VTTLGRFLSDLPVDIPLGKML 908
+ ++ L GA+ + +ER +T LGR +S PV KML
Sbjct: 727 LIAAEELLIALGALQAPPKQERMKKLQMSQLSCPITALGRTMSTFPVAPRYAKML 781
Score = 102 (41.0 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D LLG++ ++ A+ +K+++MSAT+ +E
Sbjct: 352 EIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVED 411
Query: 1171 F 1171
F
Sbjct: 412 F 412
Score = 85 (35.0 bits), Expect = 3.2e-52, Sum P(4) = 3.2e-52
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++I+DE HER +Y D LLG++S
Sbjct: 352 EIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLS 385
Score = 79 (32.9 bits), Expect = 1.3e-51, Sum P(4) = 1.3e-51
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D LLG++
Sbjct: 353 IQKDFLLLKYKVVIIDEAHERSVYTDILLGLL 384
Score = 54 (24.1 bits), Expect = 7.3e-24, Sum P(4) = 7.3e-24
Identities = 33/149 (22%), Positives = 57/149 (38%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETAR 679
+T+LGR +S PV KML + +++ A ++V+ F R E
Sbjct: 761 ITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF-EELDRPAASEEEL 819
Query: 680 KELESNH-------------------GDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEE 720
EL+ GD + +L A +G + S ++C+ G+
Sbjct: 820 AELKGRRTRVAQMKRTWAGQGASLKLGDLMVLLGA----VGACEYAGCSPQFCQANGLRY 875
Query: 721 QRFYEVTKLRSQF----KQVLGDSGLITD 745
+ E+ +LR Q V ++GL D
Sbjct: 876 KAMLEIRRLRGQLTTAVNAVCPEAGLFLD 904
Score = 44 (20.5 bits), Expect = 7.6e-23, Sum P(4) = 7.6e-23
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 938 VTSLGRFLSDLPVDIPLGKML 958
+T+LGR +S PV KML
Sbjct: 761 ITALGRTMSTFPVAPRYAKML 781
Score = 44 (20.5 bits), Expect = 7.6e-23, Sum P(4) = 7.6e-23
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 988 VTSLGRFLSDLPVDIPLGKML 1008
+T+LGR +S PV KML
Sbjct: 761 ITALGRTMSTFPVAPRYAKML 781
Score = 44 (20.5 bits), Expect = 7.6e-23, Sum P(4) = 7.6e-23
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 1038 VTSLGRFLSDLPVDIPLGKML 1058
+T+LGR +S PV KML
Sbjct: 761 ITALGRTMSTFPVAPRYAKML 781
Score = 38 (18.4 bits), Expect = 1.2e-58, Sum P(4) = 1.2e-58
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL--VNCLRMPALQTLL 1304
++D P + P + + +VY ++ET+K ++ V+ + + + +LL
Sbjct: 952 LLDDPVFIH-PSSVLFRELPEFVVYQEIVETTKMYMKGVSTVEIQWIPSLL 1001
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 495 (179.3 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 124/400 (31%), Positives = 216/400 (54%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+V+DE+HER ++ DFLL ++K + +++++LMSAT + + F YF ++KVPG
Sbjct: 600 VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGD-CPVVKVPGF 658
Query: 383 LYPIQLEYHP---IVELDRTKSE----KLDPGPYIRILSIIDKKYPRT----ERGDVLIF 431
+YP++ EY+ + +L R + K + L +I + E G +L F
Sbjct: 659 MYPVK-EYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCF 717
Query: 432 MSGISEISSIV-RAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIA 490
+ G EI + R + ++ ++VLP+HS + + +Q +F P G+RK +++TNIA
Sbjct: 718 LPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIA 777
Query: 491 ETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRL 550
ETSITI+ I VVDSG KE YD+ K+S L+ W+SK++ QR+GRAGR G Y L
Sbjct: 778 ETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHL 837
Query: 551 YSEEQYSLLAEYSTPEIRRVSIDSLLLSL-VCMGLGDVRKF--PFLEAPPAENIESSVRS 607
+ + + Y PEI R +++L++ + M +F L++P + ++ +V
Sbjct: 838 FPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVIL 897
Query: 608 LTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTN 667
L + G +D +E +T+LG+ L+ + D L K +V S++ + +L + + L+ + PF++
Sbjct: 898 LQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSS 956
Query: 668 RAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDR 706
+ + A+ L G D L + A W V + R
Sbjct: 957 SLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRR 996
Score = 199 (75.1 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 33 ETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQ-----YLVQAGFQR--IAC 85
+ + LPV +K I+ + + VV+IAGDTGCGK+T+IPQ Y+++ R +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQDSG 142
TQPRRI+ IS+++RVA E VGYQ+R E K ++F T G+LLR+ G
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQG 590
Score = 123 (48.4 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSL-VCMGLGDVRKF--PFLEAPP 865
R G Y L+ + + Y PEI R +++L++ + M +F L++P
Sbjct: 828 RCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPD 887
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V S++ + +L++
Sbjct: 888 IKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 96 (38.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+V+DE+HER ++ DFLL ++K + +++++LMSAT + + F YF
Sbjct: 600 VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYF 647
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 61 (26.5 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 282 LVLDEIHERHLHGDFLLGVIK 302
+V+DE+HER ++ DFLL ++K
Sbjct: 600 VVVDEVHERDVNTDFLLILLK 620
Score = 54 (24.1 bits), Expect = 7.5e-58, Sum P(4) = 7.5e-58
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+++DEVHER + DFLL
Sbjct: 600 VVVDEVHERDVNTDFLL 616
Score = 37 (18.1 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 1196 ILKVILASGLYPQV 1209
++K +L +GLYP +
Sbjct: 1057 LVKGVLMAGLYPNL 1070
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 495 (179.3 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 124/400 (31%), Positives = 216/400 (54%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+V+DE+HER ++ DFLL ++K + +++++LMSAT + + F YF ++KVPG
Sbjct: 600 VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGG-CPVVKVPGF 658
Query: 383 LYPIQLEYHP---IVELDRTKSE----KLDPGPYIRILSIIDKKYPRT----ERGDVLIF 431
+YP++ EY+ + +L R + K + L +I + E G +L F
Sbjct: 659 MYPVK-EYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCF 717
Query: 432 MSGISEISSIV-RAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIA 490
+ G EI + R + ++ ++VLP+HS + + +Q +F P G+RK +++TNIA
Sbjct: 718 LPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIA 777
Query: 491 ETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRL 550
ETSITI+ I VVDSG KE YD+ K+S L+ W+SK++ QR+GRAGR G Y L
Sbjct: 778 ETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHL 837
Query: 551 YSEEQYSLLAEYSTPEIRRVSIDSLLLSL-VCMGLGDVRKF--PFLEAPPAENIESSVRS 607
+ + + Y PEI R +++L++ + M +F L++P + ++ +V
Sbjct: 838 FPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVIL 897
Query: 608 LTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTN 667
L + G +D +E +T+LG+ L+ + D L K +V S++ + +L + + L+ + PF++
Sbjct: 898 LQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSS 956
Query: 668 RAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDR 706
+ + A+ L G D L + A W V + R
Sbjct: 957 SLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRR 996
Score = 199 (75.1 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 33 ETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQ-----YLVQAGFQR--IAC 85
+ + LPV +K I+ + + VV+IAGDTGCGK+T+IPQ Y+++ R +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVI 532
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQDSG 142
TQPRRI+ IS+++RVA E VGYQ+R E K ++F T G+LLR+ G
Sbjct: 533 TQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQG 590
Score = 123 (48.4 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSL-VCMGLGDVRKF--PFLEAPP 865
R G Y L+ + + Y PEI R +++L++ + M +F L++P
Sbjct: 828 RCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPD 887
Query: 866 AENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V S++ + +L++
Sbjct: 888 IKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 96 (38.9 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+V+DE+HER ++ DFLL ++K + +++++LMSAT + + F YF
Sbjct: 600 VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYF 647
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 72 (30.4 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V S++ + +L++
Sbjct: 897 LLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVI 945
Score = 61 (26.5 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 282 LVLDEIHERHLHGDFLLGVIK 302
+V+DE+HER ++ DFLL ++K
Sbjct: 600 VVVDEVHERDVNTDFLLILLK 620
Score = 54 (24.1 bits), Expect = 7.5e-58, Sum P(4) = 7.5e-58
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+++DEVHER + DFLL
Sbjct: 600 VVVDEVHERDVNTDFLL 616
Score = 37 (18.1 bits), Expect = 1.4e-58, Sum P(4) = 1.4e-58
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 1196 ILKVILASGLYPQV 1209
++K +L +GLYP +
Sbjct: 1057 LVKGVLMAGLYPNL 1070
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 372 (136.0 bits), Expect = 1.5e-58, Sum P(4) = 1.5e-58
Identities = 87/224 (38%), Positives = 127/224 (56%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L+ E+Q +VF PEG R C+V+TN+AETS+TI GI++VVD GKVK+ YD
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+S+ + W+S+ASA+QR GRAGRT PG CYRLYS + ++ PEI R ++ L+
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 496
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAID---SKERV------------T 621
L + + + V FPF P E + ++ L GA+ ERV T
Sbjct: 497 LQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSCPIT 556
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+LGR ++ PV KML + +++ A ++V+ F
Sbjct: 557 ALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
Score = 237 (88.5 bits), Expect = 1.5e-58, Sum P(4) = 1.5e-58
Identities = 49/115 (42%), Positives = 81/115 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+++E + LP+ +Q I++ V + +VI+ G+TG GK+TQ+PQ+L +AGF I
Sbjct: 31 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGV 90
Query: 86 TQPRRIACISLSKRVAYE-TLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +++S+RVA E LSQ +V YQIR+E + E+T+I F+T+G+LL++
Sbjct: 91 TEPRRVAAVAMSQRVAKEMNLSQ--RVVSYQIRYEGNVTEETRIKFMTDGVLLKE 143
Score = 145 (56.1 bits), Expect = 1.5e-58, Sum P(4) = 1.5e-58
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 143 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVED 202
Query: 366 FHTYFNRIAK---IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F AK +IKV R +P+ + ++ RT E G R + I + P
Sbjct: 203 FTQNPRLFAKPPPVIKVESRQFPVTVHFNK-----RTPLEDYS-GECFRKVCKIHRMLPA 256
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ ++ R
Sbjct: 257 ---GGILVFLTGQAEVHALCR 274
Score = 121 (47.7 bits), Expect = 1.1e-31, Sum P(4) = 1.1e-31
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + ++ PEI R ++ L+L + + + V FPF P E
Sbjct: 461 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEA 520
Query: 869 IESSVRSLTQHGAID---SKERV------------TTLGRFLSDLPVDIPLGKML 908
+ ++ L GA+ ERV T LGR ++ PV KML
Sbjct: 521 LLAAEELLIALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKML 575
Score = 99 (39.9 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 143 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVED 202
Query: 1171 F 1171
F
Sbjct: 203 F 203
Score = 82 (33.9 bits), Expect = 5.2e-52, Sum P(4) = 5.2e-52
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++I+DE HER +Y D L+G++S
Sbjct: 143 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLS 176
Score = 76 (31.8 bits), Expect = 2.2e-51, Sum P(4) = 2.2e-51
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D L+G++
Sbjct: 144 IQKDFLLLRYKVVIIDEAHERSVYTDILIGLL 175
Score = 47 (21.6 bits), Expect = 4.0e-24, Sum P(4) = 4.0e-24
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFT--NR-AFRDPDC- 675
+T+LGR ++ PV KML + +++ A ++V+ F +R A D +
Sbjct: 555 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 614
Query: 676 ----ETAR----KELESNHGDPLTV--LNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+ AR K + G L + L +G + + ++C+ G+ + E
Sbjct: 615 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 674
Query: 726 VTKLRSQ 732
+ +LR Q
Sbjct: 675 IRRLRGQ 681
Score = 41 (19.5 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 938 VTSLGRFLSDLPVDIPLGKML 958
+T+LGR ++ PV KML
Sbjct: 555 ITALGRTMATFPVAPRYAKML 575
Score = 41 (19.5 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 988 VTSLGRFLSDLPVDIPLGKML 1008
+T+LGR ++ PV KML
Sbjct: 555 ITALGRTMATFPVAPRYAKML 575
Score = 41 (19.5 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1038 VTSLGRFLSDLPVDIPLGKML 1058
+T+LGR ++ PV KML
Sbjct: 555 ITALGRTMATFPVAPRYAKML 575
Score = 38 (18.4 bits), Expect = 1.5e-58, Sum P(4) = 1.5e-58
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
++D P + P + + +VY ++ET+K ++
Sbjct: 746 LLDDPVFIH-PSSVLFKELPEFVVYQEIVETTKMYM 780
Score = 37 (18.1 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 1270 VISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
+I H+ VY +L +V L LL SA DFT+
Sbjct: 157 IIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 205
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 372 (136.0 bits), Expect = 6.0e-58, Sum P(4) = 6.0e-58
Identities = 87/224 (38%), Positives = 127/224 (56%)
Query: 457 VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVT 516
VLPL+S L+ E+Q +VF PEG R C+V+TN+AETS+TI GI++VVD GKVK+ YD
Sbjct: 590 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 649
Query: 517 AKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLL 576
+S+ + W+S+ASA+QR GRAGRT PG CYRLYS + ++ PEI R ++ L+
Sbjct: 650 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLI 709
Query: 577 LSLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAID---SKERV------------T 621
L + + + V FPF P E + ++ L GA+ ERV T
Sbjct: 710 LQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSCPIT 769
Query: 622 SLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
+LGR ++ PV KML + +++ A ++V+ F
Sbjct: 770 ALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 813
Score = 237 (88.5 bits), Expect = 6.0e-58, Sum P(4) = 6.0e-58
Identities = 49/115 (42%), Positives = 81/115 (70%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----IAC 85
+++E + LP+ +Q I++ V + +VI+ G+TG GK+TQ+PQ+L +AGF I
Sbjct: 244 EMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGV 303
Query: 86 TQPRRIACISLSKRVAYE-TLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A +++S+RVA E LSQ +V YQIR+E + E+T+I F+T+G+LL++
Sbjct: 304 TEPRRVAAVAMSQRVAKEMNLSQ--RVVSYQIRYEGNVTEETRIKFMTDGVLLKE 356
Score = 145 (56.1 bits), Expect = 6.0e-58, Sum P(4) = 6.0e-58
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 356 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVED 415
Query: 366 FHTYFNRIAK---IIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F AK +IKV R +P+ + ++ RT E G R + I + P
Sbjct: 416 FTQNPRLFAKPPPVIKVESRQFPVTVHFNK-----RTPLEDYS-GECFRKVCKIHRMLPA 469
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ ++ R
Sbjct: 470 ---GGILVFLTGQAEVHALCR 487
Score = 121 (47.7 bits), Expect = 3.0e-31, Sum P(4) = 3.0e-31
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + ++ PEI R ++ L+L + + + V FPF P E
Sbjct: 674 RTEPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEA 733
Query: 869 IESSVRSLTQHGAID---SKERV------------TTLGRFLSDLPVDIPLGKML 908
+ ++ L GA+ ERV T LGR ++ PV KML
Sbjct: 734 LLAAEELLIALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKML 788
Score = 99 (39.9 bits), Expect = 6.5e-19, Sum P(3) = 6.5e-19
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE----VKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ ++ A+ +K+++MSAT+ +E
Sbjct: 356 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVED 415
Query: 1171 F 1171
F
Sbjct: 416 F 416
Score = 82 (33.9 bits), Expect = 2.1e-51, Sum P(4) = 2.1e-51
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++I+DE HER +Y D L+G++S
Sbjct: 356 EIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLS 389
Score = 76 (31.8 bits), Expect = 8.8e-51, Sum P(4) = 8.8e-51
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D L+G++
Sbjct: 357 IQKDFLLLRYKVVIIDEAHERSVYTDILIGLL 388
Score = 47 (21.6 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFT--NR-AFRDPDC- 675
+T+LGR ++ PV KML + +++ A ++V+ F +R A D +
Sbjct: 768 ITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEELT 827
Query: 676 ----ETAR----KELESNHGDPLTV--LNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+ AR K + G L + L +G + + ++C+ G+ + E
Sbjct: 828 RLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEYASCTPQFCEANGLRYKAMME 887
Query: 726 VTKLRSQ 732
+ +LR Q
Sbjct: 888 IRRLRGQ 894
Score = 41 (19.5 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 938 VTSLGRFLSDLPVDIPLGKML 958
+T+LGR ++ PV KML
Sbjct: 768 ITALGRTMATFPVAPRYAKML 788
Score = 41 (19.5 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 988 VTSLGRFLSDLPVDIPLGKML 1008
+T+LGR ++ PV KML
Sbjct: 768 ITALGRTMATFPVAPRYAKML 788
Score = 41 (19.5 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1038 VTSLGRFLSDLPVDIPLGKML 1058
+T+LGR ++ PV KML
Sbjct: 768 ITALGRTMATFPVAPRYAKML 788
Score = 38 (18.4 bits), Expect = 6.0e-58, Sum P(4) = 6.0e-58
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
++D P + P + + +VY ++ET+K ++
Sbjct: 959 LLDDPVFIH-PSSVLFKELPEFVVYQEIVETTKMYM 993
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 1270 VISSKHQLLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
+I H+ VY +L +V L LL SA DFT+
Sbjct: 370 IIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ 418
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 413 (150.4 bits), Expect = 7.2e-58, Sum P(3) = 7.2e-58
Identities = 107/301 (35%), Positives = 165/301 (54%)
Query: 424 ERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
ERG VL+F+ G++EI + A + K V PLHST++LEEQ+ VF G RK
Sbjct: 345 ERGSVLVFLPGLAEIQYMKEALSKLVRKRLQ--VYPLHSTVTLEEQNGVFLVPVPGYRKI 402
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAE+S+T+ +++V+D V++++ D L+ W SK S QR+GRAGR
Sbjct: 403 ILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVS 462
Query: 544 PGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAEN 600
G CYRL + + + + +S PE+ R + S LL + + +GD R L P +
Sbjct: 463 KGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGD 522
Query: 601 IESSVRSLTQHGAID---SKER-----VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTV 652
IE +V L Q GA+ + +R +T LGR L+ LPVD+ LGK++V G +F ++
Sbjct: 523 IERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEEC 582
Query: 653 LSLAAVLSVQSPFTNRAFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVK-KDRVRSK 710
L +AA LS++S F + + ++ N D + +NA+K W + K +R
Sbjct: 583 LIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHP 642
Query: 711 K 711
K
Sbjct: 643 K 643
Score = 205 (77.2 bits), Expect = 7.2e-58, Sum P(3) = 7.2e-58
Identities = 43/107 (40%), Positives = 68/107 (63%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR-IAC----TQPRRIA 92
LP+ + +QE++ + VVII G TG GK+TQ+PQ+++ +R I C TQPR+I
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPCNLVVTQPRKIG 148
Query: 93 CISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
S+++ VA E +LVGYQ+ EK E TK++++T G+LL++
Sbjct: 149 ATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQK 195
Score = 179 (68.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 59/193 (30%), Positives = 95/193 (49%)
Query: 559 LAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAID- 615
+ +S PE+ R + S LL + + +GD R L P +IE +V L Q GA+
Sbjct: 479 IPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGDIERTVLQLKQIGALSV 538
Query: 616 --SKER-----VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
+ +R +T LGR L+ LPVD+ LGK++V G +F ++ L +AA LS++S F
Sbjct: 539 QSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMP 598
Query: 669 AFRDPDCETARKELESN-HGDPLTVLNAYKEWLGVK-KDRVRSKK----WCKRRGIEEQR 722
+ + ++ N D + +NA+K W + K +R K W K I+ +R
Sbjct: 599 SLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDELEWGKENCIQIKR 658
Query: 723 FYEVTKLRSQFKQ 735
EV +L K+
Sbjct: 659 IREVAELFEDLKK 671
Score = 156 (60.0 bits), Expect = 2.6e-30, Sum P(3) = 2.6e-30
Identities = 46/151 (30%), Positives = 77/151 (50%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G CYRL + + + + +S PE+ R + S LL + + +GD R L P
Sbjct: 460 RVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPI 519
Query: 866 AENIESSVRSLTQHGAID---SKER-----VTTLGRFLSDLPVDIPLGKMLVFGSMFHQI 917
+IE +V L Q GA+ + +R +T LGR L+ LPVD+ LGK++V G +F +
Sbjct: 520 LGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCL 579
Query: 918 DTMLLLDLALNFGAIDSKERVTSLGRFLSDL 948
+ L++ +L+ + + + L + S L
Sbjct: 580 EECLIIAASLSLKSFFAMPSLQQLAGYRSKL 610
Score = 127 (49.8 bits), Expect = 7.2e-58, Sum P(3) = 7.2e-58
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 368
++ + L+ Y + +DE+HER DFLL V++ LL S + VK+ILMSATIN F
Sbjct: 195 KLVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAE 254
Query: 369 YF-----NRI--AKIIKVPGRLYPIQLEYH 391
YF N++ A + +V G Y ++ EY+
Sbjct: 255 YFGSPIRNQMNPAYVFEVEGAPYAVE-EYY 283
Score = 120 (47.3 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 1173
++ + L+ Y + +DE+HER DFLL V++ LL S + VK+ILMSATIN F
Sbjct: 195 KLVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAE 254
Query: 1174 YF 1175
YF
Sbjct: 255 YF 256
Score = 100 (40.3 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 45/188 (23%), Positives = 78/188 (41%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFVHH-SXXXXXXXAGERLE 1096
+T LGR L+ LPVD+ LGK++V G +F ++ L++ +L+ + AG R +
Sbjct: 550 LTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAGYRSK 609
Query: 1097 SMDANEVEFRLKHDPKQVQVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL-LHSTA 1155
A V P + F + Y E+ RH + G C+ +
Sbjct: 610 LSFAQNV-------PSDFIAYVNAFKAWYTSRAKGEL--RHPKDELEWGKENCIQIKRIR 660
Query: 1156 EVKIILMSATINIELFHTYFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEF 1215
EV + + F+ + + + + T+ HK IL+V++A L+P E
Sbjct: 661 EVAELFEDLKKRVSRFNMHISSSSNP--TDYTSL-HKQRFILQVVIAGALFPNYFSQGEI 717
Query: 1216 NTSETVKE 1223
+ KE
Sbjct: 718 DEQLASKE 725
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSD 997
+T LGR L+ LPVD+ LGK++V G +F ++ L++ +L+ + + + L + S
Sbjct: 550 LTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAGYRSK 609
Query: 998 L 998
L
Sbjct: 610 L 610
Score = 92 (37.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSKERVTSLGRFLSD 1047
+T LGR L+ LPVD+ LGK++V G +F ++ L++ +L+ + + + L + S
Sbjct: 550 LTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAGYRSK 609
Query: 1048 L 1048
L
Sbjct: 610 L 610
Score = 70 (29.7 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
L+ Y + +DE+HER DFLL V++ LL S
Sbjct: 202 LTEYSHIFIDEVHERSEELDFLLLVVRKLLRS 233
Score = 61 (26.5 bits), Expect = 5.7e-51, Sum P(3) = 5.7e-51
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIV 270
++ + L+ Y + +DEVHER DFLL V+ L V
Sbjct: 195 KLVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYV 238
Score = 50 (22.7 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 77 QAGFQRIACTQPRRIAC---ISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITE 133
Q G +++A + I + L K V+ +TL++YS++ ++ R E+ + +
Sbjct: 171 QVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYSHIFIDEVH---ERSEELDFLLLVV 227
Query: 134 GLLLRQDS 141
LLR +S
Sbjct: 228 RKLLRSNS 235
Score = 42 (19.8 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISK 529
I+ +N+ E G VV S ++E+ D+ QEF I++
Sbjct: 931 ILGSNV-EVFFVDFGNTTVVPSSSLRELPSDLMTPAFQAQEFCIAR 975
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 276 (102.2 bits), Expect = 2.4e-57, Sum P(5) = 2.4e-57
Identities = 63/145 (43%), Positives = 88/145 (60%)
Query: 425 RGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
RG VL+F+ G++EI+++ + + W VLPLHST++ EEQ +VF RK I
Sbjct: 391 RGTVLVFLPGLAEINTLDELLAHETTRYKLW-VLPLHSTITSEEQAQVFVPPRPHQRKVI 449
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
+STNIAE+SIT+ I++V+D K M D +LQ W S+A+ QRKGRAGR
Sbjct: 450 LSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRVSS 509
Query: 545 GVCYRLYSEEQYSL-LAEYSTPEIR 568
G YR+ S E Y + L EY PE++
Sbjct: 510 GRAYRMVSREFYDIHLPEYGIPEMQ 534
Score = 232 (86.7 bits), Expect = 2.4e-57, Sum P(5) = 2.4e-57
Identities = 51/112 (45%), Positives = 74/112 (66%)
Query: 34 TQN-SLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQ--AGFQR---IACTQ 87
T N +LP+ Y++EII TV V +I GDTG GK+TQ+PQY++ A R I TQ
Sbjct: 137 TYNPTLPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRWCNIVVTQ 196
Query: 88 PRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
PRRIA IS+++RVA E + +VGYQ+ +K + E T++ F+T G+LL++
Sbjct: 197 PRRIAAISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQK 248
Score = 169 (64.5 bits), Expect = 2.4e-57, Sum P(5) = 2.4e-57
Identities = 50/163 (30%), Positives = 85/163 (52%)
Query: 588 RKFPFLEAPPAENIESSVRSL---TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
R+F + P E V +L T G +T +GR L+ LPVD+ +GK+L+ G
Sbjct: 518 REFYDIHLPEYGIPEMQVGALSTDTSEGINPHDGDLTFIGRVLAALPVDVRVGKLLLLGH 577
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKEL---ESNHGDPLTVLNAYKEW-- 699
+F + VL + A LS++S F + FR D E+ R ++ E D L +LNAYK+W
Sbjct: 578 VFGYLKEVLVIGASLSLKSFFA-KPFRG-DLESYRSKMAWSEGTFSDCLAMLNAYKKWQD 635
Query: 700 ---LGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVLGD 739
G+ ++R + +W KR ++ +R E++ + + + L +
Sbjct: 636 CCQAGMFRNRQQELEWAKRNMLQLKRMKEMSAVAKELQDRLAN 678
Score = 124 (48.7 bits), Expect = 2.4e-57, Sum P(5) = 2.4e-57
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 317 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHTYFN---- 371
++ + ++LDE+HER DF L V + LL S + VK++LMSAT++ +F YF+
Sbjct: 255 MNQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVR 314
Query: 372 ---RIAKIIKVPGRLYPI 386
A ++ V GRL+P+
Sbjct: 315 GELAPAPVVTVEGRLFPV 332
Score = 110 (43.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 1122 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHTYFN 1176
++ + ++LDE+HER DF L V + LL S + VK++LMSAT++ +F YF+
Sbjct: 255 MNQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFS 310
Score = 84 (34.6 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 856 RKFPFLEAPPAENIESSVRSL---TQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGS 912
R+F + P E V +L T G +T +GR L+ LPVD+ +GK+L+ G
Sbjct: 518 REFYDIHLPEYGIPEMQVGALSTDTSEGINPHDGDLTFIGRVLAALPVDVRVGKLLLLGH 577
Query: 913 MFHQIDTMLLLDLALNFGAIDSK 935
+F + +L++ +L+ + +K
Sbjct: 578 VFGYLKEVLVIGASLSLKSFFAK 600
Score = 83 (34.3 bits), Expect = 1.7e-48, Sum P(5) = 1.7e-48
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSK 985
+T +GR L+ LPVD+ +GK+L+ G +F + +L++ +L+ + +K
Sbjct: 553 LTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKSFFAK 600
Score = 83 (34.3 bits), Expect = 1.7e-48, Sum P(5) = 1.7e-48
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNFGAIDSK 1035
+T +GR L+ LPVD+ +GK+L+ G +F + +L++ +L+ + +K
Sbjct: 553 LTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKSFFAK 600
Score = 81 (33.6 bits), Expect = 2.7e-48, Sum P(5) = 2.7e-48
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T +GR L+ LPVD+ +GK+L+ G +F + +L++ +L+
Sbjct: 553 LTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLS 593
Score = 62 (26.9 bits), Expect = 5.8e-51, Sum P(5) = 5.8e-51
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 276 LSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
++ + ++LDE+HER DF L V + LL S
Sbjct: 255 MNQFTHVILDEVHERDQETDFALLVARKLLRS 286
Score = 55 (24.4 bits), Expect = 3.1e-50, Sum P(5) = 3.1e-50
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 225 QVQVATDNFLSSYDILILDEVHERHLYGDFLL 256
Q + T N ++ + +ILDEVHER DF L
Sbjct: 247 QKLINTKN-MNQFTHVILDEVHERDQETDFAL 277
Score = 54 (24.1 bits), Expect = 1.2e-25, Sum P(5) = 1.2e-25
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 809 RTGPGVCYRLYSEEQYSL-LAEYSTPEIR 836
R G YR+ S E Y + L EY PE++
Sbjct: 506 RVSSGRAYRMVSREFYDIHLPEYGIPEMQ 534
Score = 44 (20.5 bits), Expect = 2.4e-57, Sum P(5) = 2.4e-57
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1192 KDVTILKVILASGLYPQVAIGDEFNTSETVKE 1223
+D ILK++LA YP + +E V++
Sbjct: 699 QDNLILKMVLAGAFYPNYFTCAASDEAEAVRD 730
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 317 (116.6 bits), Expect = 2.7e-57, Sum P(4) = 2.7e-57
Identities = 74/195 (37%), Positives = 113/195 (57%)
Query: 426 GDVLIFMSGISEISSIVRAAQEYNEKSQGW---IVLPLHSTLSLEEQDRVFHYAPEGLRK 482
G +L+F+ G +I +++A + + IVLPLHS ++ +F P+ RK
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRK 704
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
I++TNIAE SITI+ + FVVD+GKVKE S+D AK+STL I++++A+QR GRAGR
Sbjct: 705 IILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRV 764
Query: 543 GPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPA 598
G C RLY+E++Y+ + E E++R +I + L ++ FL E P
Sbjct: 765 ANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEK 824
Query: 599 ENIESSVRSLTQHGA 613
E+I ++ L Q GA
Sbjct: 825 ESILQAITFLEQIGA 839
Score = 234 (87.4 bits), Expect = 2.7e-57, Sum P(4) = 2.7e-57
Identities = 45/114 (39%), Positives = 74/114 (64%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIA 84
++++ +NSLP ++Y +++ ++ VVII+G TGCGK+TQ+PQ+++ + R+
Sbjct: 173 ELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVM 232
Query: 85 CTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
TQPRRIA IS+++RVA E VGYQ+R + R + T + + T G+LLR
Sbjct: 233 VTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLR 286
Score = 137 (53.3 bits), Expect = 2.7e-57, Sum P(4) = 2.7e-57
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 311 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATI--NIELFHT 368
+ +D S +V+DEIHER ++ D+LL ++ L ++K+ILMSATI N++LF
Sbjct: 288 LTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSN 347
Query: 369 YF-NRIAKIIKVPGRLYPIQLEY 390
YF N +I++ R + +++ Y
Sbjct: 348 YFENHSMDVIRIESRAFDVKVFY 370
Score = 132 (51.5 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 1116 VAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATI--NIELFHT 1173
+ +D S +V+DEIHER ++ D+LL ++ L ++K+ILMSATI N++LF
Sbjct: 288 LTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSN 347
Query: 1174 YFNRIAKDLLSGSTARSHKDVTILKVILASGLYPQVAIGDEFNTSETVKE 1223
YF + D++ + V L ILA Y F+T+E +E
Sbjct: 348 YFENHSMDVIRIESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEE 397
Score = 106 (42.4 bits), Expect = 2.7e-57, Sum P(4) = 2.7e-57
Identities = 33/133 (24%), Positives = 62/133 (46%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETAR 679
+T LGR ++ LP+D L +ML+FG + +++L A+L+ + P+ D D ++
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSKM 932
Query: 680 K-EL-ESNHGDPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYEVTKLRSQFKQVL 737
K E+ + + D L + E+ K+ + ++C+ + V R Q + L
Sbjct: 933 KFEMAQQDLSDHLLYIRLCNEFCS--KNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLREL 990
Query: 738 GDSGLITDIPGPD 750
+ LI P D
Sbjct: 991 VRAKLINISPNRD 1003
Score = 82 (33.9 bits), Expect = 7.0e-29, Sum P(5) = 7.0e-29
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G C RLY+E++Y+ + E E++R +I + L ++ FL E P
Sbjct: 763 RVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPP 822
Query: 865 PAENIESSVRSLTQHGA 881
E+I ++ L Q GA
Sbjct: 823 EKESILQAITFLEQIGA 839
Score = 66 (28.3 bits), Expect = 6.4e-50, Sum P(4) = 6.4e-50
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 269 IVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIK-CL 304
++ +D S +V+DEIHER ++ D+LL ++ CL
Sbjct: 287 MLTSDPVASGITHIVMDEIHEREINTDYLLIALRECL 323
Score = 64 (27.6 bits), Expect = 6.3e-53, Sum P(4) = 6.3e-53
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFG 961
+T LGR ++ LP+D L +ML+FG
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFG 896
Score = 64 (27.6 bits), Expect = 6.3e-53, Sum P(4) = 6.3e-53
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFG 1011
+T LGR ++ LP+D L +ML+FG
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFG 896
Score = 64 (27.6 bits), Expect = 6.3e-53, Sum P(4) = 6.3e-53
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFG 1061
+T LGR ++ LP+D L +ML+FG
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFG 896
Score = 63 (27.2 bits), Expect = 8.0e-53, Sum P(4) = 8.0e-53
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 888 VTTLGRFLSDLPVDIPLGKMLVFG 911
+T LGR ++ LP+D L +ML+FG
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFG 896
Score = 57 (25.1 bits), Expect = 5.5e-49, Sum P(4) = 5.5e-49
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 228 VATDNFLSSYDILILDEVHERHLYGDFLL 256
+ +D S +++DE+HER + D+LL
Sbjct: 288 LTSDPVASGITHIVMDEIHEREINTDYLL 316
Score = 55 (24.4 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 845 LSLVCMGLGDVRKFPFLEAP-PAENIESSVRSLTQHGAIDSKERVTTL--GRFLSDLPVD 901
L+ C K P +P P I S + T G K+R++TL +F +L
Sbjct: 527 LTFTCENPASTTKSP--PSPTPTLGISSGLAKFTPFGGFGEKQRISTLLEKKFKEELKTA 584
Query: 902 IP 903
+P
Sbjct: 585 LP 586
Score = 51 (23.0 bits), Expect = 7.0e-29, Sum P(5) = 7.0e-29
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 577 LSLVCMGLGDVRKFPFLEAP-PAENIESSVRSLTQHGAIDSKERVTSL--GRFLSDLPVD 633
L+ C K P +P P I S + T G K+R+++L +F +L
Sbjct: 527 LTFTCENPASTTKSP--PSPTPTLGISSGLAKFTPFGGFGEKQRISTLLEKKFKEELKTA 584
Query: 634 IP 635
+P
Sbjct: 585 LP 586
Score = 37 (18.1 bits), Expect = 6.8e-37, Sum P(4) = 6.8e-37
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 283 VLDEIHERHLH 293
+LDE HE + H
Sbjct: 218 ILDEAHENNKH 228
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 324 VLDEIHERHLH 334
+LDE HE + H
Sbjct: 218 ILDEAHENNKH 228
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 445 (161.7 bits), Expect = 4.2e-57, Sum P(3) = 4.2e-57
Identities = 116/359 (32%), Positives = 184/359 (51%)
Query: 389 EYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTE-RGDVLIFMSGISEISSIVRAAQE 447
EY P E R S+ + ++ + K E G VL+F+ G + I ++ E
Sbjct: 621 EYSP--ETKRAMSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIY-FMQKHLE 677
Query: 448 YNEKSQG--WIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDS 505
N G + +LPLHS + EEQ RVF P+G+ K I+STNIAETSITI+ + FV+DS
Sbjct: 678 MNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDS 737
Query: 506 GKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTP 565
K K + M+ W SK + EQRKGRAGR PG C+ L S ++ L + TP
Sbjct: 738 CKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTP 797
Query: 566 EIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAENIESSVRSLTQHGAIDSKERVTSL 623
EI R + + LS+ + LG + F +E PP + + + +L + A+DS + +T L
Sbjct: 798 EIFRTPLHEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPL 857
Query: 624 GRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELE 683
GR L+ LP++ LGKM++ G +F+ D V +++A PF N R R
Sbjct: 858 GRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFINEGKRLGFVH--RNFAG 915
Query: 684 SNHGDPLTVLNAYKEWLGVKKDRVRSK-KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSG 741
S D + +L+ ++ W V+ ++ ++C+ + + + + Q K++L + G
Sbjct: 916 SRFSDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVG 974
Score = 223 (83.6 bits), Expect = 4.2e-57, Sum P(3) = 4.2e-57
Identities = 51/132 (38%), Positives = 78/132 (59%)
Query: 21 QKEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV---- 76
Q E+ L I ++ LPV ++++I+ T+ VVII G TGCGK+TQ+PQY++
Sbjct: 378 QLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFI 437
Query: 77 ---QAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHR-REKTKIVFIT 132
+A I TQPRRI+ +S+++RV++E GY +RFE R I+F T
Sbjct: 438 KGGRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCT 497
Query: 133 EGLLLRQ-DSGL 143
G+LLR+ +SG+
Sbjct: 498 VGVLLRKLESGI 509
Score = 186 (70.5 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 40/123 (32%), Positives = 67/123 (54%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPA 866
R PG C+ L S ++ L + TPEI R + + LS+ + LG + F +E PP
Sbjct: 773 RVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGGIGNFLSKAIEPPPL 832
Query: 867 ENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLA 926
+ + + +L + A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A
Sbjct: 833 DAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAA 892
Query: 927 LNF 929
F
Sbjct: 893 TCF 895
Score = 150 (57.9 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DEIHER ++ DFLL V++ ++ + +V++ILMSATI+ +F YF +I+V GR
Sbjct: 515 VIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFN-CPVIEVHGR 573
Query: 383 LYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGI--SEIS- 439
+P+Q EY +E D + + P P R +K E GD + + I SE S
Sbjct: 574 AHPVQ-EY--FLE-DCIQMTQFVPPPMDR-----KRKDKDDEGGDEDVNCNVICGSEYSP 624
Query: 440 SIVRAAQEYNEK 451
RA + NEK
Sbjct: 625 ETKRAMSQLNEK 636
Score = 119 (46.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 22/48 (45%), Positives = 37/48 (77%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DEIHER ++ DFLL V++ ++ + +V++ILMSATI+ +F YF
Sbjct: 515 VIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYF 562
Score = 97 (39.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 931 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 979
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 847 ALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCF 895
Score = 97 (39.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 981 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1029
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 847 ALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCF 895
Score = 97 (39.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 1031 AIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALNF 1079
A+DS + +T LGR L+ LP++ LGKM++ G +F+ D + + A F
Sbjct: 847 ALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAATCF 895
Score = 67 (28.6 bits), Expect = 4.2e-57, Sum P(3) = 4.2e-57
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDE 327
+++DEIHER ++ DFLL V++ ++ + +V ++ D + E
Sbjct: 515 VIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKE 560
Score = 58 (25.5 bits), Expect = 3.6e-56, Sum P(3) = 3.6e-56
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 240 LILDEVHERHLYGDFLLGVI 259
+I+DE+HER + DFLL V+
Sbjct: 515 VIVDEIHERDINTDFLLVVL 534
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 489 (177.2 bits), Expect = 8.4e-57, Sum P(4) = 8.4e-57
Identities = 141/460 (30%), Positives = 238/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+V+DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 582 VVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 640
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 641 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 697
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 698 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLAT 757
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSITI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 758 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 817
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + +A + PEI R +++L+L + + + FL ++P + ++
Sbjct: 818 YHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 876
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 877 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 935
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 936 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSR---ENYLEENL 992
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 993 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1030
Score = 187 (70.9 bits), Expect = 8.4e-57, Sum P(4) = 8.4e-57
Identities = 43/110 (39%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+IAGDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 520 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 569
Score = 119 (46.9 bits), Expect = 4.7e-17, Sum P(4) = 4.7e-17
Identities = 30/119 (25%), Positives = 61/119 (51%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + +A + PEI R +++L+L + + + FL ++P
Sbjct: 811 RCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 869
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 870 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 100 (40.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+V+DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 582 VVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 629
Score = 68 (29.0 bits), Expect = 6.0e-12, Sum P(4) = 6.0e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 68 (29.0 bits), Expect = 6.0e-12, Sum P(4) = 6.0e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 68 (29.0 bits), Expect = 6.0e-12, Sum P(4) = 6.0e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 62 (26.9 bits), Expect = 8.4e-57, Sum P(4) = 8.4e-57
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+V+DE+HER ++ DFLL ++K L
Sbjct: 582 VVVDEVHERDVNTDFLLILLKGL 604
Score = 54 (24.1 bits), Expect = 5.7e-56, Sum P(4) = 5.7e-56
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+++DEVHER + DFLL
Sbjct: 582 VVVDEVHERDVNTDFLL 598
Score = 37 (18.1 bits), Expect = 8.4e-57, Sum P(4) = 8.4e-57
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1100 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1141
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 487 (176.5 bits), Expect = 2.4e-56, Sum P(4) = 2.4e-56
Identities = 139/460 (30%), Positives = 238/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 528 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 586
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H + R +SE LD ++ ID R E G +
Sbjct: 587 MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 643
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 644 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 703
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSITI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 704 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 763
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 764 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 822
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 823 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 881
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 882 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLEENL 938
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 939 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 976
Score = 184 (69.8 bits), Expect = 2.4e-56, Sum P(4) = 2.4e-56
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 406 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 465
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 466 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRK 515
Score = 115 (45.5 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 757 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 815
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 816 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 874
Score = 99 (39.9 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 528 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 575
Score = 68 (29.0 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 826 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 874
Score = 68 (29.0 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 826 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 874
Score = 68 (29.0 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 826 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 874
Score = 61 (26.5 bits), Expect = 2.4e-56, Sum P(4) = 2.4e-56
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 528 VIVDEVHERDVNTDFLLILLKGL 550
Score = 55 (24.4 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 528 VIVDEVHERDVNTDFLL 544
Score = 37 (18.1 bits), Expect = 2.4e-56, Sum P(4) = 2.4e-56
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1046 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1087
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 485 (175.8 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 139/460 (30%), Positives = 237/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 642
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 643 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 699
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 700 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 759
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSITI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 760 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 819
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 820 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 878
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 879 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 937
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 938 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSR---ENYLEENL 994
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 995 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1032
Score = 187 (70.9 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 43/110 (39%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+IAGDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 571
Score = 115 (45.5 bits), Expect = 1.5e-16, Sum P(4) = 1.5e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 813 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 871
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 872 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 99 (39.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 68 (29.0 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 7.6e-12, Sum P(4) = 7.6e-12
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 61 (26.5 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGL 606
Score = 55 (24.4 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 584 VIVDEVHERDVNTDFLL 600
Score = 37 (18.1 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1102 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1143
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 487 (176.5 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 139/460 (30%), Positives = 238/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 614
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H + R +SE LD ++ ID R E G +
Sbjct: 615 MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 671
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 672 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 731
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSITI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 732 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 791
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 792 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLEENL 966
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 967 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1004
Score = 184 (69.8 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRK 543
Score = 115 (45.5 bits), Expect = 2.8e-16, Sum P(4) = 2.8e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 785 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 843
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 844 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 99 (39.9 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 68 (29.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 61 (26.5 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGL 578
Score = 55 (24.4 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 556 VIVDEVHERDVNTDFLL 572
Score = 37 (18.1 bits), Expect = 3.0e-56, Sum P(4) = 3.0e-56
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1074 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1115
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 483 (175.1 bits), Expect = 5.4e-56, Sum P(4) = 5.4e-56
Identities = 138/460 (30%), Positives = 237/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 614
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 615 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 671
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 672 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 731
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 732 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 791
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 792 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLEENL 966
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 967 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1004
Score = 184 (69.8 bits), Expect = 5.4e-56, Sum P(4) = 5.4e-56
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 493
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 543
Score = 115 (45.5 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 785 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 843
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 844 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 99 (39.9 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 68 (29.0 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 61 (26.5 bits), Expect = 5.4e-56, Sum P(4) = 5.4e-56
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGL 578
Score = 55 (24.4 bits), Expect = 2.3e-55, Sum P(4) = 2.3e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 556 VIVDEVHERDVNTDFLL 572
Score = 37 (18.1 bits), Expect = 5.4e-56, Sum P(4) = 5.4e-56
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1074 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1115
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 364 (133.2 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 88/237 (37%), Positives = 135/237 (56%)
Query: 447 EYNEKSQGWI---VLPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVV 503
++ EK+ I VLPL+S L+ E+Q +VF P G R C+V+TN+AETS+TI GI++VV
Sbjct: 569 DHEEKADPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVV 628
Query: 504 DSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYS 563
D G+VK+ YD +S+ + WIS+ASA QR GRAGRT PG CYRLYS + + +S
Sbjct: 629 DCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFS 688
Query: 564 TPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAENI---ESSVRSL------TQHGAI 614
EI R ++ L+L + + + V FPF P +E + E + SL +HG +
Sbjct: 689 EAEITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRL 748
Query: 615 DSKER------VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPF 665
E+ ++ LGR ++ PV KML G + ++++ + ++V+ F
Sbjct: 749 SEMEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 231 (86.4 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 51/116 (43%), Positives = 77/116 (66%)
Query: 28 LMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQR----I 83
L +I+E + LPV +Q I++ V V++ G+TG GK+TQ+PQ+L +AGF I
Sbjct: 242 LPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGII 301
Query: 84 ACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A IS+S RVA E ++ S +V YQIR+E + E TKI +T+G+LL++
Sbjct: 302 GVTEPRRVAAISMSHRVATE-MNLSSGVVSYQIRYEGNVTENTKIKVMTDGVLLKE 356
Score = 140 (54.3 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL----HSTAEVKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ ++ +K+I+MSAT+ +E
Sbjct: 356 EIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVED 415
Query: 366 F---HTYFNRIAKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F F+ +IKV R + + + ++ +D E R + I + P
Sbjct: 416 FTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETF------RKICKIHRMLPP 469
Query: 423 TERGDVLIFMSGISEISSIVR 443
G +L+F++G +E+ S+ R
Sbjct: 470 ---GGILVFLTGQAEVHSVCR 487
Score = 121 (47.7 bits), Expect = 4.2e-30, Sum P(4) = 4.2e-30
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
RT PG CYRLYS + + +S EI R ++ L+L + + + V FPF P +E
Sbjct: 666 RTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPTPPSSEA 725
Query: 869 I---ESSVRSL------TQHGAIDSKER------VTTLGRFLSDLPVDIPLGKMLVFG 911
+ E + SL +HG + E+ ++ LGR ++ PV KML G
Sbjct: 726 LIAAEELLISLGALEKPARHGRLSEMEKARLSCPISPLGRAMAAFPVAPRYAKMLALG 783
Score = 101 (40.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLL----HSTAEVKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ ++ +K+I+MSAT+ +E
Sbjct: 356 EIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVED 415
Query: 1171 F 1171
F
Sbjct: 416 F 416
Score = 87 (35.7 bits), Expect = 2.0e-50, Sum P(4) = 2.0e-50
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++I+DE HER +Y D L+G++S
Sbjct: 356 EIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLS 389
Score = 81 (33.6 bits), Expect = 8.2e-50, Sum P(4) = 8.2e-50
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
+ D+ L Y V+++DE HER ++ D L+G++
Sbjct: 357 IQRDFLLQKYSVIIIDEAHERSVYTDILIGLL 388
Score = 44 (20.5 bits), Expect = 3.1e-22, Sum P(4) = 3.1e-22
Identities = 27/127 (21%), Positives = 51/127 (40%)
Query: 620 VTSLGRFLSDLPVDIPLGKMLVFGSM---FHQIDTVLSLAAVLSVQSPFTNRAFRDPDC- 675
++ LGR ++ PV KML G I T++S V + + A + +
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRPAGSEEENV 819
Query: 676 ----ETAR----KELESNHGDPLTV--LNAYKEWLGVKKDRVRSKKWCKRRGIEEQRFYE 725
+ AR + L + G L + L +G + + ++C+ G+ + E
Sbjct: 820 KMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLE 879
Query: 726 VTKLRSQ 732
+ +LR Q
Sbjct: 880 IRRLRGQ 886
Score = 40 (19.1 bits), Expect = 7.9e-22, Sum P(4) = 7.9e-22
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFG 961
++ LGR ++ PV KML G
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALG 783
Score = 40 (19.1 bits), Expect = 7.9e-22, Sum P(4) = 7.9e-22
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFG 1011
++ LGR ++ PV KML G
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALG 783
Score = 40 (19.1 bits), Expect = 7.9e-22, Sum P(4) = 7.9e-22
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFG 1061
++ LGR ++ PV KML G
Sbjct: 760 ISPLGRAMAAFPVAPRYAKMLALG 783
Score = 38 (18.4 bits), Expect = 6.2e-56, Sum P(4) = 6.2e-56
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 1256 IVDPPPGLKLPGRNVISSKHQLLVYMSLLETSKPFL 1291
++D P + P + + + +VY ++ET+K ++
Sbjct: 951 LLDDPVFIH-PSSALHKTLPEFVVYQEIMETTKMYM 985
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 484 (175.4 bits), Expect = 7.8e-56, Sum P(4) = 7.8e-56
Identities = 138/463 (29%), Positives = 238/463 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 642
Query: 383 LYPIQLEY----------------HPIVELDRTKSE-KLDPGPYIRILSIIDKKYPRTER 425
+YP++ Y H E R++ E LD ++ ID R E
Sbjct: 643 MYPVKEHYLEDILAKLGKHQYPHRHRHHEWPRSEDECALDLDLVTDLVLHIDA---RGEP 699
Query: 426 GDVLIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCI 484
G +L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +
Sbjct: 700 GGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIV 759
Query: 485 VSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGP 544
++TNIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR
Sbjct: 760 LATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQS 819
Query: 545 GVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAEN 600
G Y L+ + + + PEI R +++L+L + + + FL ++P +
Sbjct: 820 GFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKA 878
Query: 601 IESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLS 660
++ +V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+
Sbjct: 879 VDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 938
Query: 661 VQSPFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIE 719
+ PF++ + + + L + G D L + A W V + + RS + +E
Sbjct: 939 -RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLE 994
Query: 720 EQRFYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
E Y + L QF + + ++ L+ P D +L+S +
Sbjct: 995 ENLLYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1035
Score = 184 (69.8 bits), Expect = 7.8e-56, Sum P(4) = 7.8e-56
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 571
Score = 115 (45.5 bits), Expect = 3.1e-16, Sum P(4) = 3.1e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 816 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 874
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 875 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 933
Score = 99 (39.9 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 68 (29.0 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 885 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 933
Score = 68 (29.0 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 885 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 933
Score = 68 (29.0 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 885 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 933
Score = 61 (26.5 bits), Expect = 7.8e-56, Sum P(4) = 7.8e-56
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGL 606
Score = 55 (24.4 bits), Expect = 3.3e-55, Sum P(4) = 3.3e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 584 VIVDEVHERDVNTDFLL 600
Score = 37 (18.1 bits), Expect = 7.8e-56, Sum P(4) = 7.8e-56
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1105 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1146
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 413 (150.4 bits), Expect = 9.5e-56, Sum P(3) = 9.5e-56
Identities = 95/289 (32%), Positives = 165/289 (57%)
Query: 466 LEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEF 525
L +Q R+F P G+RKC++STNI+ TS+TIDGIR+VVD G VK+++++ + L+
Sbjct: 276 LNQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 335
Query: 526 WISKASAEQRKGRAGRTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGL 584
ISK+ A QR GRAGRT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ +
Sbjct: 336 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 395
Query: 585 GDVRKFPFLEAPPAENIESSVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGS 644
DV +FP+L+ P I +++ L Q AID VT LG + + P+ L ++ +
Sbjct: 396 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAA 455
Query: 645 MFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESNHGDPLTVLNAYKEW--LGV 702
D +L +AA+LSV++ F DP+ + KE E H + + ++ L V
Sbjct: 456 SLDCEDLLLPIAAMLSVENVFIRPV--DPEYQ---KEAEQRHRELAAKAGGFNDFATLAV 510
Query: 703 KKDRVRSK----KWCKRRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIP 747
++ +S WC++ I + + ++ +Q ++++ +D P
Sbjct: 511 IFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFP 559
Score = 172 (65.6 bits), Expect = 9.5e-56, Sum P(3) = 9.5e-56
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTA-----EVKIILM 357
CLL + D L+ + V++LDE HER L D L G++K L + +K+++M
Sbjct: 54 CLLK---HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVM 110
Query: 358 SATINIELFHTYFNRIAKIIKVPGRLYPIQLEYHPIV-ELDRTKSEKLDPGPYIRILSII 416
SAT+ + +F I +PGRLYP++ ++ ++ DR + YI+ + +
Sbjct: 111 SATMELAKLSAFFGN-CPIFDIPGRLYPVREKFCNLIGPRDRENTA------YIQAIVKV 163
Query: 417 DKKYPRTER-GDVLIFMSGISEISS----IVRAAQ--EYNEKSQ-----GWIVLPLHSTL 464
E GD+L+F++G EI + + A+ +Y+ Q G ++LP + ++
Sbjct: 164 TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSM 223
Query: 465 SLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMS 512
+ Q + + K I + T +TI GI V + + M+
Sbjct: 224 TTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGITGVSHHARPRNMT 271
Score = 164 (62.8 bits), Expect = 5.0e-28, Sum P(3) = 5.0e-28
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 809 RTGPGVCYRLYSEEQYS-LLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAE 867
RT G C+R+YS++ ++ + ++ PEI+R S+ S++L+L C+ + DV +FP+L+ P
Sbjct: 351 RTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNER 410
Query: 868 NIESSVRSLTQHGAIDSKERVTTLGRFLSDLPV 900
I +++ L Q AID VT LG + + P+
Sbjct: 411 LILEALKQLYQCDAIDRSGHVTRLGLSMVEFPL 443
Score = 121 (47.7 bits), Expect = 9.5e-56, Sum P(3) = 9.5e-56
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 83 IACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQDSG 142
I TQPR++A IS+++RVA E + VGYQ+RF+ ++T I ++T+G LL+ G
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Score = 74 (31.1 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 270 VAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCL 304
+ D L+ + V++LDE HER L D L G++K L
Sbjct: 59 ILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKL 93
Score = 68 (29.0 bits), Expect = 6.8e-45, Sum P(3) = 6.8e-45
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 231 DNFLSSYDILILDEVHERHLYGDFLLGVI 259
D L+ + ++ILDE HER L D L G++
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLL 90
Score = 40 (19.1 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 22 KEKFSTLMKIRETQNSLPVAQYKQEIIDTVLKERVVIIAGD 62
+EKF L+ R+ +N+ Y Q I+ + + +AGD
Sbjct: 139 REKFCNLIGPRDRENTA----YIQAIVKVTMDIHLNEMAGD 175
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 483 (175.1 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 138/460 (30%), Positives = 237/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 642
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 643 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 699
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 700 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 759
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 760 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 819
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 820 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 878
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 879 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 937
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 938 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLEENL 994
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 995 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1032
Score = 184 (69.8 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPRR 521
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 571
Score = 115 (45.5 bits), Expect = 3.1e-16, Sum P(4) = 3.1e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 813 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 871
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 872 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 99 (39.9 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 68 (29.0 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 61 (26.5 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGL 606
Score = 55 (24.4 bits), Expect = 4.4e-55, Sum P(4) = 4.4e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 584 VIVDEVHERDVNTDFLL 600
Score = 37 (18.1 bits), Expect = 1.0e-55, Sum P(4) = 1.0e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1102 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1143
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 482 (174.7 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 138/468 (29%), Positives = 237/468 (50%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 614
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 615 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 671
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 672 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLAT 731
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 732 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 791
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 792 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKK--DRVRSKKWCKRRGIEE 720
PF++ + + + L + G D L + A W V + DR + + + +
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYA 969
Query: 721 QRFYEVTKLRSQFKQVLGDSGLI---TDIPGPDASLS--SRERALRHG 763
+ L QF + + ++ L+ +D P A + S E L G
Sbjct: 970 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKG 1017
Score = 183 (69.5 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 42/110 (38%), Positives = 68/110 (61%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I+ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 543
Score = 115 (45.5 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 785 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 843
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 844 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 99 (39.9 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 61 (26.5 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGL 578
Score = 55 (24.4 bits), Expect = 5.8e-55, Sum P(4) = 5.8e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 556 VIVDEVHERDVNTDFLL 572
Score = 37 (18.1 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1074 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1115
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 482 (174.7 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 138/468 (29%), Positives = 237/468 (50%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 614
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 615 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 671
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 672 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLAT 731
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 732 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 791
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 792 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKK--DRVRSKKWCKRRGIEE 720
PF++ + + + L + G D L + A W V + DR + + + +
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYA 969
Query: 721 QRFYEVTKLRSQFKQVLGDSGLI---TDIPGPDASLS--SRERALRHG 763
+ L QF + + ++ L+ +D P A + S E L G
Sbjct: 970 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKG 1017
Score = 183 (69.5 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 42/110 (38%), Positives = 68/110 (61%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I+ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 543
Score = 115 (45.5 bits), Expect = 3.6e-16, Sum P(4) = 3.6e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 785 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 843
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 844 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 99 (39.9 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 902
Score = 61 (26.5 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGL 578
Score = 55 (24.4 bits), Expect = 5.8e-55, Sum P(4) = 5.8e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 556 VIVDEVHERDVNTDFLL 572
Score = 37 (18.1 bits), Expect = 1.4e-55, Sum P(4) = 1.4e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1074 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1115
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 482 (174.7 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 138/468 (29%), Positives = 237/468 (50%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 579 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 637
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 638 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 694
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 695 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLAT 754
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 755 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 814
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 815 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 873
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 874 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 932
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKK--DRVRSKKWCKRRGIEE 720
PF++ + + + L + G D L + A W V + DR + + + +
Sbjct: 933 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYA 992
Query: 721 QRFYEVTKLRSQFKQVLGDSGLI---TDIPGPDASLS--SRERALRHG 763
+ L QF + + ++ L+ +D P A + S E L G
Sbjct: 993 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKG 1040
Score = 183 (69.5 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 42/110 (38%), Positives = 68/110 (61%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I+ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 457 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 516
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 517 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 566
Score = 115 (45.5 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 808 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 866
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 867 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 925
Score = 99 (39.9 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 579 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 626
Score = 68 (29.0 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 877 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 925
Score = 68 (29.0 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 877 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 925
Score = 68 (29.0 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 877 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 925
Score = 61 (26.5 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 579 VIVDEVHERDVNTDFLLILLKGL 601
Score = 55 (24.4 bits), Expect = 6.9e-55, Sum P(4) = 6.9e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 579 VIVDEVHERDVNTDFLL 595
Score = 37 (18.1 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1097 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1138
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 482 (174.7 bits), Expect = 1.7e-55, Sum P(4) = 1.7e-55
Identities = 138/468 (29%), Positives = 237/468 (50%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 642
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 643 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 699
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 700 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLAT 759
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSIT++ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 760 NIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 819
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 820 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 878
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 879 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 937
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKK--DRVRSKKWCKRRGIEE 720
PF++ + + + L + G D L + A W V + DR + + + +
Sbjct: 938 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYA 997
Query: 721 QRFYEVTKLRSQFKQVLGDSGLI---TDIPGPDASLS--SRERALRHG 763
+ L QF + + ++ L+ +D P A + S E L G
Sbjct: 998 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKG 1045
Score = 183 (69.5 bits), Expect = 1.7e-55, Sum P(4) = 1.7e-55
Identities = 42/110 (38%), Positives = 68/110 (61%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I+ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 462 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 521
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 522 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 571
Score = 115 (45.5 bits), Expect = 4.0e-16, Sum P(4) = 4.0e-16
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 813 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 871
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 872 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 99 (39.9 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 631
Score = 68 (29.0 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 68 (29.0 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 882 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 930
Score = 61 (26.5 bits), Expect = 1.7e-55, Sum P(4) = 1.7e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 584 VIVDEVHERDVNTDFLLILLKGL 606
Score = 55 (24.4 bits), Expect = 7.1e-55, Sum P(4) = 7.1e-55
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 584 VIVDEVHERDVNTDFLL 600
Score = 37 (18.1 bits), Expect = 1.7e-55, Sum P(4) = 1.7e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1102 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1143
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 483 (175.1 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 141/460 (30%), Positives = 237/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+V+DE HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 582 VVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 640
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H R +SE LD ++ ID R E G +
Sbjct: 641 MYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 697
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 698 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLAT 757
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETSITI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 758 NIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 817
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + +A + PEI R +++L+L + + + FL ++P + ++
Sbjct: 818 YHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 876
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + D L K +V ++F + +L + + L+ +
Sbjct: 877 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 935
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 936 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGWEEVLRWQDRSSR---ENYLEENL 992
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 993 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1030
Score = 186 (70.5 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 43/110 (39%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+IAGDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 460 LPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 519
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 520 ISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 569
Score = 119 (46.9 bits), Expect = 2.4e-16, Sum P(4) = 2.4e-16
Identities = 30/119 (25%), Positives = 61/119 (51%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + +A + PEI R +++L+L + + + FL ++P
Sbjct: 811 RCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 869
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + D L K +V ++F + +L++
Sbjct: 870 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 94 (38.1 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+V+DE HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 582 VVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 629
Score = 68 (29.0 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 68 (29.0 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 68 (29.0 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + D L K +V ++F + +L++
Sbjct: 880 LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV 928
Score = 56 (24.8 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+V+DE HER ++ DFLL ++K L
Sbjct: 582 VVVDEEHERDVNTDFLLILLKGL 604
Score = 48 (22.0 bits), Expect = 1.4e-54, Sum P(4) = 1.4e-54
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 240 LILDEVHERHLYGDFLL 256
+++DE HER + DFLL
Sbjct: 582 VVVDEEHERDVNTDFLL 598
Score = 37 (18.1 bits), Expect = 2.1e-55, Sum P(4) = 2.1e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1100 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1141
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 478 (173.3 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 137/460 (29%), Positives = 237/460 (51%)
Query: 323 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYFNRIAKIIKVPGR 382
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF +IKVPG
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG-CPVIKVPGF 614
Query: 383 LYPIQLEY----------HPIVELDRT-KSEK---LDPGPYIRILSIIDKKYPRTERGDV 428
+YP++ Y H + R +SE LD ++ ID R E G +
Sbjct: 615 MYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDA---RGEPGGI 671
Query: 429 LIFMSGISEISSIVRAAQE-YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKCIVST 487
L F+ G EI + + QE +++LP+HS + + +Q +F P G+RK +++T
Sbjct: 672 LCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 731
Query: 488 NIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVC 547
NIAETS TI+ I VVDSG KE YD+ K+S L+ W+S+A+ QR+GRAGR G
Sbjct: 732 NIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFA 791
Query: 548 YRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIES 603
Y L+ + + + PEI R +++L+L + + + FL ++P + ++
Sbjct: 792 YHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 604 SVRSLTQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQS 663
+V L + G +D +E +T+LG+ L+ + + L K +V ++F + +L + + L+ +
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 664 PFTNRAFRDPDCETARKELESNHG-DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGIEEQR 722
PF++ + + + L + G D L + A W V + + RS + +EE
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSR---ENYLEENL 966
Query: 723 FYE-----VTKLRSQFKQVLGDSGLITDIPGPDASLSSRE 757
Y + L QF + + ++ L+ P D +L+S +
Sbjct: 967 LYAPSLRFIHGLIKQFSENIYEAFLVGK-PS-DCTLASAQ 1004
Score = 184 (69.8 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 42/110 (38%), Positives = 69/110 (62%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQA------GFQ-RIACTQPRR 90
LPV ++ I++ + + VV+I+GDTGCGK+T+IPQ L++ G + + TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 91 IACISLSKRVAYETLSQYSNLVGYQIRFE-KHRREKTKIVFITEGLLLRQ 139
I+ +S+++RV++E VG+Q+R E K ++F T G+LLR+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 543
Score = 111 (44.1 bits), Expect = 7.1e-16, Sum P(4) = 7.1e-16
Identities = 28/119 (23%), Positives = 60/119 (50%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAP 864
R G Y L+ + + + PEI R +++L+L + + + FL ++P
Sbjct: 785 RCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSP 843
Query: 865 PAENIESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ ++ +V L + G +D +E +TTLG+ L+ + + L K +V ++F + +L++
Sbjct: 844 NIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVV 902
Score = 99 (39.9 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 1128 LVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+++DE+HER ++ DFLL ++K L ++++LMSAT + E F YF
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 603
Score = 64 (27.6 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 925 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
L G +D +E +T+LG+ L+ + + L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVV 902
Score = 64 (27.6 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 975 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
L G +D +E +T+LG+ L+ + + L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVV 902
Score = 64 (27.6 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 1025 LALNFGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
L G +D +E +T+LG+ L+ + + L K +V ++F + +L++
Sbjct: 854 LLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVV 902
Score = 61 (26.5 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 282 LVLDEIHERHLHGDFLLGVIKCL 304
+++DE+HER ++ DFLL ++K L
Sbjct: 556 VIVDEVHERDVNTDFLLILLKGL 578
Score = 55 (24.4 bits), Expect = 1.3e-54, Sum P(4) = 1.3e-54
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 240 LILDEVHERHLYGDFLL 256
+I+DEVHER + DFLL
Sbjct: 556 VIVDEVHERDVNTDFLL 572
Score = 37 (18.1 bits), Expect = 3.1e-55, Sum P(4) = 3.1e-55
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 1277 LLVYMSLLETSKPFLVNCLRMPALQTLLLFSSAIHTNSDFTR 1318
L +M++ F+ + ++ L LLL +H D R
Sbjct: 1074 LTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRR 1115
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 360 (131.8 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 85/235 (36%), Positives = 125/235 (53%)
Query: 458 LPLHSTLSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTA 517
LPL+S LS+ +Q RVF P G+R C++STN+AETS+TI G+++V+D G K YD
Sbjct: 578 LPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSIT 637
Query: 518 KMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLL 577
+S IS+AS +QR GRAGR G YRLYS Y +++ PEI D L+L
Sbjct: 638 GVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVL 697
Query: 578 SLVCMGLGDVRKFPFLEAPPAENIESSVRSLTQHGAID-------SKERVTSLGRFLSDL 630
L M + V FPF AP + +ES+ + L + GA+ ++ R+T LG+ L+
Sbjct: 698 HLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVF 757
Query: 631 PVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDCETARKELESN 685
P+ K + + + + L ++LSV+ P + D KEL N
Sbjct: 758 PLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKELMKN 812
Score = 216 (81.1 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 43/114 (37%), Positives = 78/114 (68%)
Query: 30 KIRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGF----QRIAC 85
+I++++ LP+ + I++ + + V ++ G+TG GK+TQIPQ+L +AG+ + I
Sbjct: 228 EIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGI 287
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
T+PRR+A I++++RV E L++ V YQIR+E R E T I+F+T+G+L+++
Sbjct: 288 TEPRRVAAIAMAQRVGVE-LAKPDE-VSYQIRYEGTRSETTNILFMTDGVLMKE 339
Score = 132 (51.5 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 809 RTGPGVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFLEAPPAEN 868
R G YRLYS Y +++ PEI D L+L L M + V FPF AP +
Sbjct: 661 RISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQM 720
Query: 869 IESSVRSLTQHGAID-------SKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTML 921
+ES+ + L + GA+ ++ R+T LG+ L+ P+ K + + + +
Sbjct: 721 LESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAI 780
Query: 922 LL 923
LL
Sbjct: 781 LL 782
Score = 131 (51.2 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 40/140 (28%), Positives = 74/140 (52%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL--LHS-TAE-VKIILMSATINIEL 365
E+ D L Y V+++DE HER ++ D L+G++ + L S TA +++++MSAT+ ++
Sbjct: 339 EMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDD 398
Query: 366 F-HT-YFNRIA-KIIKVPGRLYPIQLEYHPIVELDRTKSEKLDPGPYIRILSIIDKKYPR 422
F H F + K+IKV R +P+ + + RT + + R I + P
Sbjct: 399 FTHKKLFPLLTPKVIKVDARQFPVSVHFEK-----RTPDDYIASA--FRKTCRIHETLPP 451
Query: 423 TERGDVLIFMSGISEISSIV 442
G +L+F++G E+ ++
Sbjct: 452 ---GAILVFVTGQHEVKQLI 468
Score = 98 (39.6 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCL--LHS-TAE-VKIILMSATINIEL 1170
++ D L Y V+++DE HER ++ D L+G++ + L S TA +++++MSAT+ ++
Sbjct: 339 EMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDD 398
Query: 1171 F 1171
F
Sbjct: 399 F 399
Score = 85 (35.0 bits), Expect = 3.3e-49, Sum P(3) = 3.3e-49
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVIS 260
++ D L Y ++++DE HER +Y D L+G++S
Sbjct: 339 EMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLS 372
Score = 76 (31.8 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 273 DYFLSSYDVLVLDEIHERHLHGDFLLGVI 301
D L Y V+++DE HER ++ D L+G++
Sbjct: 343 DVMLKKYSVILIDEAHERSMYSDVLIGML 371
Score = 66 (28.3 bits), Expect = 7.3e-23, Sum P(3) = 7.3e-23
Identities = 35/160 (21%), Positives = 62/160 (38%)
Query: 609 TQHGAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNR 668
T++G ++ R+T LG+ L+ P+ K + + + + L ++LSV+ P
Sbjct: 738 TKNGKTEA--RITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPV 795
Query: 669 AFRDPDCETARKELESN----------HGDP--LTVLNAYKEWLGVKKDRVRSKKWCKRR 716
+ D KEL N H L L V + + + C++
Sbjct: 796 SSLRGDTPEETKELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKV 855
Query: 717 GIEEQRFYEVTKLRSQFKQVLGDS-------GLITDIPGP 749
G+ + E KLR Q ++ S L +D+P P
Sbjct: 856 GLRVKALVEARKLRQQLTNIVNASCKKEHAAALDSDLPPP 895
Score = 40 (19.1 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 934 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
++ R+T LG+ L+ P+ K + + + +LL
Sbjct: 743 TEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILL 782
Score = 40 (19.1 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 984 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
++ R+T LG+ L+ P+ K + + + +LL
Sbjct: 743 TEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILL 782
Score = 40 (19.1 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1034 SKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
++ R+T LG+ L+ P+ K + + + +LL
Sbjct: 743 TEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILL 782
Score = 38 (18.4 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 499 IRFVVDSGKVKEMSYDVTAK 518
I F+ D +KEM DV K
Sbjct: 328 ILFMTDGVLMKEMEQDVMLK 347
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 423 (154.0 bits), Expect = 8.0e-54, Sum P(4) = 8.0e-54
Identities = 136/459 (29%), Positives = 227/459 (49%)
Query: 275 FLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTVEVAADNFLSSYDVLVLDEIHERHLH 334
F + L++DE HER L DFLL K L + ++ D+ L +
Sbjct: 323 FFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSN----YFG 378
Query: 335 GDFLLGVIKCLLHSTAEVKIILMSATIN-IELFHTYFNRIAKIIKVP-GRLYPIQL--EY 390
G G + + + EV I + ++ H R+ K + P G+ P +L Y
Sbjct: 379 G----GTVMDVEGRSFEVSIYHLEDILSKTGYMHP---RMEKFLGKPTGKETPSELLAAY 431
Query: 391 H---PIVELDRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSGISEISSIVRAAQE 447
+ IV D +D + +L ++ ++ + G V++++ G S+++S++ +
Sbjct: 432 YGGNTIVHPD------IDNDLIVSLLELLLRQ---GDAGAVIVYLPGYSDMTSLLARLES 482
Query: 448 YNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLR-KCIVSTNIAETSITIDGIRFVVDSG 506
+ Q I+L LHS + EQ +VF P G+R K I+STNI +TSITI + +V+D+G
Sbjct: 483 SLPREQITIIL-LHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTG 540
Query: 507 KVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTGPGVCYRLYSEEQYSLLAEYSTPE 566
K +YD T S L WIS+A A+QR GRAGR G CYRLY ++ + + Y+ PE
Sbjct: 541 LAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPE 600
Query: 567 IRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAENIESSVRSLTQHGAIDSKERVTS 622
I R ++D + L L + D + FL + PP + + S L G +D ++ VT
Sbjct: 601 IMRRTLDEICL-LTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTP 659
Query: 623 LGRFLSDLPVDIPLGKMLVFGSMFHQIDTVLSLAAVLSVQSPFTNRAFRDPDC-ETARKE 681
LG +++LP+ + +GK LV+ +D+++ +AA SV+ PF R + +
Sbjct: 660 LGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRV 719
Query: 682 LESNHG--DPLTVLNAYKEWLGVKKDRVRSKKWCKRRGI 718
L + G D L V+ Y+E+ +K+ + +C+R I
Sbjct: 720 LFAGDGMSDSLAVIKLYEEFTNLKRKDIGD--FCERNFI 756
Score = 200 (75.5 bits), Expect = 8.0e-54, Sum P(4) = 8.0e-54
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 31 IRETQNSLPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQ-----RIAC 85
I+ + SLP+ + ++ I++ + +++V+II G TG GKSTQ+PQY+++ + RI
Sbjct: 202 IQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVV 261
Query: 86 TQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLR 138
+QPRRIA IS+S+R++ E VGY IR + T ++ T G LLR
Sbjct: 262 SQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLR 314
Score = 160 (61.4 bits), Expect = 1.8e-32, Sum P(4) = 1.8e-32
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 813 GVCYRLYSEEQYSLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKFPFL----EAPPAEN 868
G CYRLY ++ + + Y+ PEI R ++D + L L + D + FL + PP +
Sbjct: 579 GNCYRLYDNDRMARMNLYTIPEIMRRTLDEICL-LTKLAAPDKKIENFLALALDTPPKDA 637
Query: 869 IESSVRSLTQHGAIDSKERVTTLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 923
+ S L G +D ++ VT LG +++LP+ + +GK LV+ +D+M+++
Sbjct: 638 VMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIII 692
Score = 130 (50.8 bits), Expect = 1.8e-32, Sum P(4) = 1.8e-32
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 303 CLLHSTVEVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATIN 362
CLL + + + +F + L++DE HER L DFLL K L ++++LMSAT++
Sbjct: 311 CLLRA-LAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMD 369
Query: 363 IELFHTYFNRIAKIIKVPGRLYPIQLEYH 391
+E YF ++ V GR + + + YH
Sbjct: 370 LEALSNYFGG-GTVMDVEGRSFEVSI-YH 396
Score = 108 (43.1 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 1120 NFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAEVKIILMSATINIELFHTYF 1175
+F + L++DE HER L DFLL K L ++++LMSAT+++E YF
Sbjct: 322 SFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYF 377
Score = 90 (36.7 bits), Expect = 5.6e-25, Sum P(5) = 5.6e-25
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 930 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 973
G +D ++ VT LG +++LP+ + +GK LV+ +D+M+++
Sbjct: 649 GVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIII 692
Score = 90 (36.7 bits), Expect = 5.6e-25, Sum P(5) = 5.6e-25
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 980 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1023
G +D ++ VT LG +++LP+ + +GK LV+ +D+M+++
Sbjct: 649 GVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIII 692
Score = 90 (36.7 bits), Expect = 5.6e-25, Sum P(5) = 5.6e-25
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 1030 GAIDSKERVTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLL 1073
G +D ++ VT LG +++LP+ + +GK LV+ +D+M+++
Sbjct: 649 GVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIII 692
Score = 61 (26.5 bits), Expect = 8.0e-54, Sum P(4) = 8.0e-54
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 1191 HKDVTILKVILASGLYPQVAIGDEFNTSETVKE 1223
+ D ++++ L +GLYP++A D N ++ V E
Sbjct: 793 NNDTNMIRLALTAGLYPKLAYMDRENKNQLVAE 825
Score = 59 (25.8 bits), Expect = 8.0e-54, Sum P(4) = 8.0e-54
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 232 NFLSSYDILILDEVHERHLYGDFLL 256
+F + LI+DE HER L DFLL
Sbjct: 322 SFFKNTTHLIIDEAHERDLDTDFLL 346
Score = 43 (20.2 bits), Expect = 5.9e-52, Sum P(4) = 5.9e-52
Identities = 20/72 (27%), Positives = 29/72 (40%)
Query: 687 GDPLTVLNAYKEWLGVKKDRVRSKKWC----KRRGIEEQRFYEVTKLRSQFKQVL-GDSG 741
GDPL ++ G KK + + +W K R ++ E T L S L G
Sbjct: 826 GDPLVQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKR 885
Query: 742 LITDIPGPDASL 753
IT+ G + L
Sbjct: 886 FITEAHGSEMLL 897
Score = 40 (19.1 bits), Expect = 5.6e-25, Sum P(5) = 5.6e-25
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 715 RRGIEEQRFYEVTKLRSQFKQVLGDSGLITDIPGPDASLSSRER 758
RR ++E +TKL + K++ L D P DA + S R
Sbjct: 603 RRTLDE--ICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSR 644
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 370 (135.3 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 98/292 (33%), Positives = 158/292 (54%)
Query: 424 ERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRKC 483
ER VL+F+ G+ EI+ + K V PLHS+++LEEQ+ VF G RK
Sbjct: 384 ERSSVLVFLPGLGEINYMHELLTSLVHKRLQ--VYPLHSSVALEEQNNVFLSPVPGYRKI 441
Query: 484 IVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRTG 543
I+STNIAE+S+T+ +++V+D + + D +L+ W SK S QRKGRAGR
Sbjct: 442 ILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVS 501
Query: 544 PGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAEN 600
G CYRL ++ + + + ++ PE+ R + S +L + + +G+ R L P +
Sbjct: 502 RGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSD 561
Query: 601 IESSVRSLTQHGAID-SKER---------VTSLGRFLSDLPVDIPLGKMLVFGSMFHQID 650
IE ++ L + GA+ S +R +T LGR L+ LPV+ LGK++V G +F +D
Sbjct: 562 IERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLD 621
Query: 651 TVLSLAAVLSVQSPFTNRAFRDPDCETARKELE---SNHGDPLTVLNAYKEW 699
L +AA LS+++ F FR + R ++ S+ D + ++ A+K W
Sbjct: 622 ECLIIAAALSLKNFFA-MPFRQ-HLDGYRNKVNFSGSSKSDCIALVEAFKTW 671
Score = 209 (78.6 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 43/107 (40%), Positives = 69/107 (64%)
Query: 38 LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLVQAGFQRIA-C----TQPRRIA 92
LP+++YK+E++ + VVII G TG GKSTQ+PQY++ QR A C TQPR+I
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKIG 191
Query: 93 CISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGLLLRQ 139
S+++ ++ E +VGYQ+ EK E T+++++T G+LL++
Sbjct: 192 ASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQK 238
Score = 137 (53.3 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G CYRL ++ + + + ++ PE+ R + S +L + + +G+ R L P
Sbjct: 499 RVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPG 558
Query: 866 AENIESSVRSLTQHGAID-SKER---------VTTLGRFLSDLPVDIPLGKMLVFGSMFH 915
+IE ++ L + GA+ S +R +T LGR L+ LPV+ LGK++V G +F
Sbjct: 559 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFG 618
Query: 916 QIDTMLLLDLAL---NFGAIDSKERV 938
+D L++ AL NF A+ ++ +
Sbjct: 619 CLDECLIIAAALSLKNFFAMPFRQHL 644
Score = 130 (50.8 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 35/105 (33%), Positives = 62/105 (59%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 368
++ + L + +++DE+HER DFLL V++ LL + + VK++LMSATI+ + F
Sbjct: 238 KIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFAD 297
Query: 369 YF-----NRI--AKIIKVPGRLYPIQLEYHPIVELDRTKSEKLDP 406
YF N++ A I +V G+ + ++ EY+ + +L+ KL P
Sbjct: 298 YFAVPVQNKMNPAYIFEVEGKPHSVE-EYY-LNDLEHIHHSKLSP 340
Score = 112 (44.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 1173
++ + L + +++DE+HER DFLL V++ LL + + VK++LMSATI+ + F
Sbjct: 238 KIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFAD 297
Query: 1174 YF 1175
YF
Sbjct: 298 YF 299
Score = 87 (35.7 bits), Expect = 4.6e-23, Sum P(4) = 4.6e-23
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL---NFGAIDSKERV 988
+T LGR L+ LPV+ LGK++V G +F +D L++ AL NF A+ ++ +
Sbjct: 591 LTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHL 644
Score = 87 (35.7 bits), Expect = 4.6e-23, Sum P(4) = 4.6e-23
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLAL---NFGAIDSKERV 1038
+T LGR L+ LPV+ LGK++V G +F +D L++ AL NF A+ ++ +
Sbjct: 591 LTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMPFRQHL 644
Score = 85 (35.0 bits), Expect = 7.4e-23, Sum P(4) = 7.4e-23
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T LGR L+ LPV+ LGK++V G +F +D L++ AL+
Sbjct: 591 LTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALS 631
Score = 66 (28.3 bits), Expect = 2.5e-46, Sum P(4) = 2.5e-46
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 268 EIVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
+IV+A L + +++DE+HER DFLL V++ LL +
Sbjct: 238 KIVSAKS-LMEFTHIIIDEVHERTEEMDFLLLVVRKLLRT 276
Score = 59 (25.8 bits), Expect = 1.3e-45, Sum P(4) = 1.3e-45
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIV 270
++ + L + +I+DEVHER DFLL V+ L V
Sbjct: 238 KIVSAKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFV 281
Score = 42 (19.8 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 442 VRAAQEYNEKSQGWIVLPLHSTLSLEEQDRV-FHYAPEGLRKCIVSTNIAETSITIDGIR 500
V +A+E K QG V L +T RV + + + VS N ++ S T+ +
Sbjct: 847 VHSAEEIEGKVQGMNVSKLRNT-------RVNVDFQKQTVDPMQVSFNTSDRSQTVTDLL 899
Query: 501 FVVDSGKVKEMSY 513
+D +V E+ +
Sbjct: 900 LTIDVTEVVEVGH 912
Score = 40 (19.1 bits), Expect = 5.8e-53, Sum P(4) = 5.8e-53
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1191 HKDVTILKVILASGLYP 1207
+K IL+V+LA YP
Sbjct: 734 YKQRFILQVVLAGAFYP 750
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 1303 LLLFSSAIHTNSDFTRLVFDS-------WIEVF-VPLQEAKSTADVNQLE---HSLTRDL 1351
LL+ + TNS F ++V S + + F VP+Q + A + ++E HS+
Sbjct: 267 LLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNPAYIFEVEGKPHSVEE-- 324
Query: 1352 VQFMSSATHLAYS 1364
+++ H+ +S
Sbjct: 325 -YYLNDLEHIHHS 336
Score = 38 (18.4 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 415 IIDKKYPRTERGDVLIFM 432
IID+ + RTE D L+ +
Sbjct: 252 IIDEVHERTEEMDFLLLV 269
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 135 LLLRQDSGLITDIPGPDASLS 155
+LLR+ S L+ IPG A LS
Sbjct: 1210 MLLRETS-LMPHIPGLPALLS 1229
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 381 (139.2 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 100/293 (34%), Positives = 159/293 (54%)
Query: 423 TERGDVLIFMSGISEISSIVRAAQEYNEKSQGWIVLPLHSTLSLEEQDRVFHYAPEGLRK 482
+ER VL+F+ G+ EI+ + K V PLHS+++LEEQ+ VF G RK
Sbjct: 384 SERSSVLVFLPGLGEINYMHELLTNMIHKRLQ--VYPLHSSVTLEEQNNVFLSPVPGYRK 441
Query: 483 CIVSTNIAETSITIDGIRFVVDSGKVKEMSYDVTAKMSTLQEFWISKASAEQRKGRAGRT 542
I+STNIAE+S+T+ +++V+D + + D +L+ W SK S +QRKGRAGR
Sbjct: 442 IILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRV 501
Query: 543 GPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPPAE 599
G CYRL + + S + ++ PE+ R + S +L + + +G+ R L P
Sbjct: 502 SKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLS 561
Query: 600 NIESSVRSLTQHGAID-SKER---------VTSLGRFLSDLPVDIPLGKMLVFGSMFHQI 649
+IE ++ L + GA+ S +R +T LGR L+ LPV LGK++V G +F +
Sbjct: 562 DIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCL 621
Query: 650 DTVLSLAAVLSVQSPFTNRAFRDPDCETARKELE---SNHGDPLTVLNAYKEW 699
D L +AA LS+++ FT FR + R ++ S+ D L ++ A++ W
Sbjct: 622 DECLIIAAALSLKNFFT-MPFRQ-HLDGYRNKVHFSGSSRSDCLALVEAFRAW 672
Score = 201 (75.8 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 24 KFSTLMKIRETQNS---LPVAQYKQEIIDTVLKERVVIIAGDTGCGKSTQIPQYLV---- 76
K S + I ET LP+ + K+E+I + VVII G TG GKSTQ+PQY++
Sbjct: 117 KLSNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYT 176
Query: 77 -QAGFQRIACTQPRRIACISLSKRVAYETLSQYSNLVGYQIRFEKHRREKTKIVFITEGL 135
++ F I TQPR+I S+++ ++ E LVGYQ+ EK E T+++++T G+
Sbjct: 177 QRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGV 236
Query: 136 LLRQ 139
LL++
Sbjct: 237 LLQK 240
Score = 138 (53.6 bits), Expect = 1.7e-26, Sum P(4) = 1.7e-26
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 809 RTGPGVCYRLYSEEQY-SLLAEYSTPEIRRVSIDSLLLSLVCMGLGDVRKF--PFLEAPP 865
R G CYRL + + S + ++ PE+ R + S +L + + +G+ R L P
Sbjct: 500 RVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPS 559
Query: 866 AENIESSVRSLTQHGAID-SKER---------VTTLGRFLSDLPVDIPLGKMLVFGSMFH 915
+IE ++ L + GA+ S +R +T LGR L+ LPV LGK++V G +F
Sbjct: 560 LSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFG 619
Query: 916 QIDTMLLLDLALN 928
+D L++ AL+
Sbjct: 620 CLDECLIIAAALS 632
Score = 121 (47.7 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 32/90 (35%), Positives = 54/90 (60%)
Query: 310 EVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 368
++ + L + + +DE+HER DFLL V++ LL + + VK++LMSATIN + F
Sbjct: 240 KIVSAKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFAD 299
Query: 369 YF-----NRI--AKIIKVPGRLYPIQLEYH 391
YF N++ A + +V G+ + I+ EY+
Sbjct: 300 YFAVPVQNKMNPAYVFEVEGKPHAIE-EYY 328
Score = 114 (45.2 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 1115 QVAADNFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHSTAE-VKIILMSATINIELFHT 1173
++ + L + + +DE+HER DFLL V++ LL + + VK++LMSATIN + F
Sbjct: 240 KIVSAKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFAD 299
Query: 1174 YF 1175
YF
Sbjct: 300 YF 301
Score = 83 (34.3 bits), Expect = 6.8e-21, Sum P(4) = 6.8e-21
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 938 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 978
+T LGR L+ LPV LGK++V G +F +D L++ AL+
Sbjct: 592 LTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALS 632
Score = 83 (34.3 bits), Expect = 6.8e-21, Sum P(4) = 6.8e-21
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 988 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1028
+T LGR L+ LPV LGK++V G +F +D L++ AL+
Sbjct: 592 LTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALS 632
Score = 83 (34.3 bits), Expect = 6.8e-21, Sum P(4) = 6.8e-21
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1038 VTSLGRFLSDLPVDIPLGKMLVFGSMFHQIDTMLLLDLALN 1078
+T LGR L+ LPV LGK++V G +F +D L++ AL+
Sbjct: 592 LTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALS 632
Score = 62 (26.9 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 268 EIVAADYFLSSYDVLVLDEIHERHLHGDFLLGVIKCLLHS 307
+IV+A L + + +DE+HER DFLL V++ LL +
Sbjct: 240 KIVSAKS-LMEFTHIFIDEVHERTEEMDFLLLVVRKLLRT 278
Score = 55 (24.4 bits), Expect = 1.5e-45, Sum P(4) = 1.5e-45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 227 QVATDNFLSSYDILILDEVHERHLYGDFLLGVISPPLHCGGEIV 270
++ + L + + +DEVHER DFLL V+ L V
Sbjct: 240 KIVSAKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFV 283
Score = 43 (20.2 bits), Expect = 9.5e-17, Sum P(4) = 9.5e-17
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 442 VRAAQEYNEKSQGWIVLPLHST-LSLEEQDRVFHYAPEGLRKCIVSTNIAETSITIDGIR 500
V AA+E K QG V L +T ++++ Q + +A+ +TID +
Sbjct: 848 VHAAEEIEGKVQGGSVSKLRNTRVNVDFQKQTVDPMQVSFNTLDRPRTVADLLLTID-VT 906
Query: 501 FVVDSG 506
VV+ G
Sbjct: 907 EVVEVG 912
Score = 40 (19.1 bits), Expect = 2.1e-52, Sum P(4) = 2.1e-52
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1191 HKDVTILKVILASGLYP 1207
+K IL+V+LA YP
Sbjct: 735 YKQRFILQVVLAGAFYP 751
Score = 39 (18.8 bits), Expect = 9.5e-17, Sum P(4) = 9.5e-17
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 381 GRLYPIQLE-YHPIVEL-----DRTKSEKLDPGPYIRILSIIDKKYPRTERGDVLIFMSG 434
GRL IQ++ + EL +R + GP+ +L D++YP +R + + ++G
Sbjct: 691 GRLNYIQIKRIREVAELYEELKNRISQFNMFVGPHHPVL---DQEYPYKQRFILQVVLAG 747
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 135 LLLRQDSGLITDIPGPDASLS 155
+LLR+ S L+ IPG A LS
Sbjct: 1211 MLLRETS-LMPHIPGLPALLS 1230
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 1303 LLLFSSAIHTNSDFTRLVFDS-------WIEVF-VPLQEAKSTADVNQLE 1344
LL+ + TNS F ++V S + + F VP+Q + A V ++E
Sbjct: 269 LLVVRKLLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMNPAYVFEVE 318
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1417 1354 0.00087 124 3 11 22 0.36 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 625 (66 KB)
Total size of DFA: 503 KB (2230 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 103.74u 0.12s 103.86t Elapsed: 00:00:23
Total cpu time: 103.93u 0.13s 104.06t Elapsed: 00:00:26
Start: Thu Aug 15 12:10:09 2013 End: Thu Aug 15 12:10:35 2013
WARNINGS ISSUED: 2