Query psy3479
Match_columns 518
No_of_seqs 335 out of 2973
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 17:47:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3suz_A Amyloid beta A4 precurs 100.0 2.9E-35 9.8E-40 303.6 7.6 225 4-256 79-370 (388)
2 2xkx_A Disks large homolog 4; 100.0 1.6E-28 5.6E-33 272.5 30.6 326 60-433 57-389 (721)
3 3suz_A Amyloid beta A4 precurs 100.0 1.1E-30 3.8E-35 269.4 6.4 297 207-516 58-364 (388)
4 2xkx_A Disks large homolog 4; 99.9 3E-25 1E-29 246.3 24.9 259 155-516 61-381 (721)
5 3gsl_A Disks large homolog 4; 99.9 1.2E-22 4.1E-27 189.7 19.2 167 348-516 6-180 (196)
6 3r0h_A INAD, inactivation-NO-a 99.9 2.2E-22 7.6E-27 189.7 18.4 163 348-516 19-186 (206)
7 2qt5_A Glutamate receptor-inte 99.9 8.7E-21 3E-25 178.0 19.4 164 348-515 8-184 (200)
8 1p1d_A PDZ45, glutamate recept 99.9 7E-21 2.4E-25 178.1 18.2 169 348-516 7-185 (196)
9 3gsl_A Disks large homolog 4; 99.9 7.2E-21 2.5E-25 177.6 15.8 170 61-250 4-180 (196)
10 3r0h_A INAD, inactivation-NO-a 99.8 7.7E-20 2.6E-24 172.3 17.0 160 65-250 21-186 (206)
11 1p1d_A PDZ45, glutamate recept 99.8 5.5E-19 1.9E-23 165.1 17.1 168 62-248 6-183 (196)
12 2qt5_A Glutamate receptor-inte 99.8 5.8E-19 2E-23 165.5 16.1 162 65-248 10-183 (200)
13 1w9e_A Syntenin 1; cell adhesi 99.8 4.9E-18 1.7E-22 154.4 19.2 151 347-516 4-156 (166)
14 3gge_A PDZ domain-containing p 99.8 5.5E-18 1.9E-22 136.8 11.7 83 64-151 7-89 (95)
15 2yt7_A Amyloid beta A4 precurs 99.7 3.6E-16 1.2E-20 129.8 12.6 91 64-154 11-101 (101)
16 1w9e_A Syntenin 1; cell adhesi 99.7 1.6E-15 5.5E-20 137.7 17.4 151 62-248 4-154 (166)
17 1r6j_A Syntenin 1; PDZ, membra 99.7 4.4E-16 1.5E-20 123.2 10.5 77 63-151 5-81 (82)
18 3rle_A Golgi reassembly-stacki 99.6 5.3E-15 1.8E-19 139.3 12.9 134 375-514 16-157 (209)
19 3cbz_A Dishevelled-2; PDZ doma 99.6 5.3E-15 1.8E-19 124.2 9.4 90 62-152 5-96 (108)
20 3b76_A E3 ubiquitin-protein li 99.6 1.1E-14 3.7E-19 124.2 11.4 89 63-153 25-114 (118)
21 2qg1_A Multiple PDZ domain pro 99.5 3.7E-14 1.3E-18 115.4 11.7 86 62-152 4-89 (92)
22 2vwr_A Ligand of NUMB protein 99.5 5.2E-14 1.8E-18 115.2 12.2 86 62-152 3-89 (95)
23 1kwa_A Hcask/LIN-2 protein; PD 99.5 2.7E-14 9.1E-19 115.2 10.2 82 64-151 3-84 (88)
24 1wi4_A Synip, syntaxin binding 99.5 3.5E-14 1.2E-18 119.4 10.5 85 65-151 18-104 (109)
25 2d92_A INAD-like protein; PDZ 99.5 4.1E-14 1.4E-18 118.7 11.0 88 64-153 17-106 (108)
26 2q9v_A Membrane-associated gua 99.5 3.6E-14 1.2E-18 114.9 9.9 88 61-151 1-88 (90)
27 2i04_A Membrane-associated gua 99.5 1.1E-13 3.7E-18 110.8 12.5 85 63-150 1-85 (85)
28 2ejy_A 55 kDa erythrocyte memb 99.5 5.2E-14 1.8E-18 115.4 10.6 81 65-151 15-95 (97)
29 1i16_A Interleukin 16, LCF; cy 99.5 5.6E-14 1.9E-18 122.0 11.4 90 61-152 28-118 (130)
30 2la8_A Inactivation-NO-after-p 99.5 3.5E-14 1.2E-18 118.7 9.7 85 62-153 2-86 (106)
31 2dc2_A GOPC, golgi associated 99.5 5.8E-14 2E-18 116.8 10.8 88 63-154 10-97 (103)
32 2iwo_A Multiple PDZ domain pro 99.5 2.5E-14 8.7E-19 122.4 8.6 91 61-153 23-114 (120)
33 2qkv_A Inactivation-NO-after-p 99.5 9.1E-14 3.1E-18 114.0 11.7 88 60-154 6-93 (96)
34 2i1n_A Discs, large homolog 3; 99.5 1.3E-13 4.4E-18 114.4 12.2 90 61-153 3-95 (102)
35 1wfg_A Regulating synaptic mem 99.5 3.4E-14 1.1E-18 123.6 9.0 88 66-153 40-128 (131)
36 3o46_A Maguk P55 subfamily mem 99.5 1.3E-13 4.4E-18 112.4 11.8 82 65-152 7-88 (93)
37 4a8c_A Periplasmic PH-dependen 99.5 1.4E-13 4.8E-18 143.9 14.8 151 359-515 240-409 (436)
38 1ufx_A KIAA1526 protein; PDZ d 99.5 5E-14 1.7E-18 117.1 9.1 86 65-152 9-97 (103)
39 1ujd_A KIAA0559 protein; PDZ d 99.5 9.1E-14 3.1E-18 118.4 10.6 91 61-153 11-110 (117)
40 3hpk_A Protein interacting wit 99.5 1.6E-13 5.3E-18 118.4 12.2 87 61-151 18-104 (125)
41 3egg_C Spinophilin; PP1, serin 99.5 1.2E-13 4.1E-18 125.3 11.9 84 64-150 82-169 (170)
42 3pv2_A DEGQ; trypsin fold, PDZ 99.5 1.4E-13 4.8E-18 144.3 14.1 151 359-515 258-432 (451)
43 2byg_A Channel associated prot 99.5 2E-13 7E-18 116.2 12.6 87 62-151 24-113 (117)
44 1qav_A Alpha-1 syntrophin (res 99.5 1.6E-13 5.5E-18 111.1 11.3 85 63-151 5-89 (90)
45 1v62_A KIAA1719 protein; struc 99.5 1.1E-13 3.7E-18 117.9 10.7 87 64-153 17-103 (117)
46 2fe5_A Presynaptic protein SAP 99.5 3.1E-13 1.1E-17 110.3 12.5 87 62-151 3-92 (94)
47 4e34_A Golgi-associated PDZ an 99.5 1.8E-13 6E-18 110.1 10.8 83 64-150 4-86 (87)
48 2db5_A INAD-like protein; PDZ 99.5 9.3E-14 3.2E-18 120.3 9.6 88 65-154 28-117 (128)
49 1g9o_A NHE-RF; PDZ domain, com 99.5 4.3E-13 1.5E-17 108.8 13.0 83 61-150 2-84 (91)
50 2csj_A TJP2 protein; PDZ domai 99.5 8.6E-14 3E-18 118.5 9.2 103 56-162 8-114 (117)
51 1wf8_A Neurabin-I; PDZ domain, 99.5 1.8E-13 6.3E-18 114.5 11.0 89 62-153 9-101 (107)
52 2awx_A Synapse associated prot 99.5 3.3E-13 1.1E-17 112.6 12.5 88 65-155 6-96 (105)
53 1uhp_A Hypothetical protein KI 99.5 2.4E-13 8E-18 113.9 11.6 89 62-153 8-102 (107)
54 3l4f_D SH3 and multiple ankyri 99.5 2.5E-13 8.6E-18 118.1 12.1 88 63-153 28-125 (132)
55 2fne_A Multiple PDZ domain pro 99.5 1.3E-13 4.6E-18 117.3 9.9 86 64-152 27-113 (117)
56 2jik_A Synaptojanin-2 binding 99.5 4.8E-13 1.6E-17 110.7 12.7 88 63-153 8-98 (101)
57 1wg6_A Hypothetical protein (r 99.5 1.8E-13 6E-18 118.3 10.5 88 66-153 29-123 (127)
58 2ehr_A INAD-like protein; PDZ 99.5 1.9E-13 6.4E-18 116.5 10.5 88 64-153 17-111 (117)
59 2jil_A GRIP1 protein, glutamat 99.5 2.6E-13 8.8E-18 111.5 10.9 89 62-153 3-93 (97)
60 1ueq_A Membrane associated gua 99.5 7.2E-13 2.5E-17 113.8 14.1 87 65-154 22-108 (123)
61 2he4_A Na(+)/H(+) exchange reg 99.5 5.2E-13 1.8E-17 108.0 12.4 83 63-152 5-87 (90)
62 1m5z_A GRIP, AMPA receptor int 99.5 5.9E-13 2E-17 107.9 12.6 84 63-152 7-91 (91)
63 1d5g_A Human phosphatase HPTP1 99.5 5.7E-13 2E-17 109.2 12.6 87 64-153 7-94 (96)
64 4amh_A Disks large homolog 1; 99.5 7.6E-13 2.6E-17 110.6 13.2 82 69-152 8-92 (106)
65 2ego_A General receptor for ph 99.5 4.3E-13 1.5E-17 110.0 11.5 86 63-151 5-95 (96)
66 1uep_A Membrane associated gua 99.5 1E-13 3.4E-18 115.3 7.6 89 61-152 8-96 (103)
67 3e17_A Tight junction protein 99.5 3.7E-13 1.3E-17 108.4 10.7 78 66-153 4-82 (88)
68 2opg_A Multiple PDZ domain pro 99.5 7.8E-13 2.7E-17 108.8 12.9 85 65-153 7-91 (98)
69 1wi2_A Riken cDNA 2700099C19; 99.5 5.6E-13 1.9E-17 111.0 12.1 87 61-153 14-100 (104)
70 1ihj_A INAD; intermolecular di 99.4 3.9E-13 1.3E-17 110.6 10.8 85 65-151 8-96 (98)
71 3soe_A Membrane-associated gua 99.4 6.6E-13 2.3E-17 111.2 12.1 82 64-154 14-95 (113)
72 3qe1_A Sorting nexin-27, G pro 99.4 6.4E-13 2.2E-17 111.2 11.9 86 64-153 8-103 (107)
73 3i4w_A Disks large homolog 4; 99.4 7.2E-13 2.5E-17 110.2 12.1 83 64-152 13-95 (104)
74 2fcf_A Multiple PDZ domain pro 99.4 7.1E-13 2.4E-17 110.1 11.7 91 61-153 3-100 (103)
75 1wha_A KIAA0147 protein, scrib 99.4 3.8E-13 1.3E-17 112.2 9.9 85 65-152 10-98 (105)
76 1va8_A Maguk P55 subfamily mem 99.4 1.5E-12 5.1E-17 110.1 13.7 81 65-152 28-108 (113)
77 3gge_A PDZ domain-containing p 99.4 6.5E-13 2.2E-17 107.1 10.8 78 347-429 5-82 (95)
78 1q3o_A Shank1; PDZ, GKAP, pept 99.4 7.3E-13 2.5E-17 111.3 11.7 89 62-153 7-105 (109)
79 1uju_A Scribble; PDZ domain, c 99.4 1.3E-13 4.5E-18 116.2 7.1 87 64-152 11-104 (111)
80 2iwq_A Multiple PDZ domain pro 99.4 7.3E-13 2.5E-17 113.7 11.8 93 59-153 21-120 (123)
81 2eno_A Synaptojanin-2-binding 99.4 1.2E-12 3.9E-17 112.0 12.8 91 60-153 15-108 (120)
82 2kpk_A Membrane-associated gua 99.4 5.6E-13 1.9E-17 115.5 10.9 86 65-153 21-106 (129)
83 2g5m_B Neurabin-2; spinophilin 99.4 2.5E-13 8.6E-18 114.9 8.4 90 62-154 4-97 (113)
84 2dkr_A LIN-7 homolog B; LIN-7B 99.4 9E-13 3.1E-17 107.2 11.3 84 64-152 7-90 (93)
85 1x6d_A Interleukin-16; PDZ dom 99.4 8.2E-13 2.8E-17 112.8 11.4 86 65-152 18-103 (119)
86 2dmz_A INAD-like protein; PDZ 99.4 8.7E-13 3E-17 114.3 11.5 93 58-152 11-106 (129)
87 2o2t_A Multiple PDZ domain pro 99.4 4.8E-13 1.7E-17 113.9 9.6 88 63-152 21-110 (117)
88 1um1_A KIAA1849 protein, RSGI 99.4 1.4E-12 4.6E-17 109.8 12.1 87 65-154 11-98 (110)
89 2e7k_A Maguk P55 subfamily mem 99.4 4.1E-13 1.4E-17 108.9 8.6 80 65-152 9-88 (91)
90 1v6b_A Harmonin isoform A1; st 99.4 3.1E-13 1E-17 115.3 8.2 86 66-154 22-109 (118)
91 2v90_A PDZ domain-containing p 99.4 1.2E-12 4.1E-17 107.2 11.3 87 62-152 3-89 (96)
92 3axa_A Afadin, nectin-3, prote 99.4 1.5E-12 5.1E-17 108.7 12.1 84 65-152 14-98 (106)
93 3nfk_A Tyrosine-protein phosph 99.4 6.3E-13 2.1E-17 111.2 9.7 84 65-150 20-106 (107)
94 2r4h_A Membrane-associated gua 99.4 1.7E-12 6E-17 109.5 12.3 86 61-151 23-108 (112)
95 2daz_A INAD-like protein; PDZ 99.4 1E-12 3.5E-17 113.1 10.8 86 65-154 28-113 (124)
96 1r6j_A Syntenin 1; PDZ, membra 99.4 9.1E-13 3.1E-17 104.1 9.6 75 348-432 5-79 (82)
97 2dlu_A INAD-like protein; PDZ 99.4 1.2E-12 4.2E-17 110.2 11.0 84 64-154 17-100 (111)
98 2koj_A Partitioning defective 99.4 2.5E-12 8.4E-17 108.3 12.8 92 60-152 9-101 (111)
99 1n7e_A AMPA receptor interacti 99.4 2.1E-12 7.1E-17 106.0 11.9 83 65-152 8-90 (97)
100 1mfg_A ERB-B2 interacting prot 99.4 2E-12 6.9E-17 105.7 11.8 81 66-152 7-93 (95)
101 2gzv_A PRKCA-binding protein; 99.4 2.7E-12 9.2E-17 108.7 12.8 92 56-151 18-109 (114)
102 1nf3_C PAR-6B; semi-CRIB motif 99.4 7.8E-13 2.7E-17 114.5 9.6 87 64-152 31-125 (128)
103 2pa1_A PDZ and LIM domain prot 99.4 1.7E-12 5.8E-17 104.3 10.9 82 66-152 4-85 (87)
104 2f5y_A Regulator of G-protein 99.4 2E-12 6.7E-17 104.9 11.4 82 63-154 4-85 (91)
105 1wif_A RSGI RUH-020, riken cDN 99.4 1.4E-12 4.7E-17 112.0 10.7 81 65-151 30-110 (126)
106 3r68_A Na(+)/H(+) exchange reg 99.4 1.6E-12 5.6E-17 106.2 10.7 83 63-152 6-88 (95)
107 3ngh_A PDZ domain-containing p 99.4 1.4E-12 4.9E-17 108.8 10.4 83 64-152 3-85 (106)
108 2jre_A C60-1 PDZ domain peptid 99.4 1.8E-12 6.1E-17 108.7 10.6 91 60-152 10-104 (108)
109 2vsp_A PDZ domain-containing p 99.4 5.5E-13 1.9E-17 108.2 7.2 83 63-152 4-86 (91)
110 2q3g_A PDZ and LIM domain prot 99.4 2.2E-12 7.5E-17 104.1 10.5 81 65-152 6-86 (89)
111 1q7x_A PDZ2B domain of PTP-BAS 99.4 1.3E-12 4.3E-17 109.6 9.4 89 62-153 9-103 (108)
112 2djt_A Unnamed protein product 99.4 1.7E-12 5.7E-17 108.1 10.0 87 63-152 12-98 (104)
113 2jxo_A Ezrin-radixin-moesin-bi 99.4 3E-12 1E-16 105.2 11.1 83 62-150 9-91 (98)
114 1uew_A Membrane associated gua 99.4 2.6E-12 8.8E-17 108.8 10.9 89 61-152 9-103 (114)
115 2z17_A Pleckstrin homology SEC 99.4 2.4E-12 8E-17 107.2 10.3 86 60-148 13-103 (104)
116 2cs5_A Tyrosine-protein phosph 99.4 1E-12 3.5E-17 112.2 7.6 87 65-153 18-107 (119)
117 1n7t_A 99-MER peptide of densi 99.4 3.5E-12 1.2E-16 105.9 10.6 82 65-152 14-101 (103)
118 2uzc_A Human pdlim5, PDZ and L 99.4 5.3E-12 1.8E-16 101.5 11.2 81 65-152 6-86 (88)
119 2kv8_A RGS12, regulator of G-p 99.4 8.4E-13 2.9E-17 105.1 6.4 80 63-152 3-82 (83)
120 2h2b_A Tight junction protein 99.4 7.1E-12 2.4E-16 104.8 12.3 88 61-152 6-97 (107)
121 1tp5_A Presynaptic density pro 99.4 5.3E-12 1.8E-16 107.7 11.7 83 64-152 16-98 (119)
122 1v5q_A GRIP1 homolog, glutamat 99.3 3.2E-12 1.1E-16 109.6 10.1 90 63-152 16-107 (122)
123 2w4f_A Protein LAP4; structura 99.3 9.5E-12 3.3E-16 102.0 12.6 87 62-152 3-93 (97)
124 2dm8_A INAD-like protein; PDZ 99.3 3.6E-12 1.2E-16 108.2 10.2 86 64-153 19-104 (116)
125 2iwn_A Multiple PDZ domain pro 99.3 6.6E-12 2.3E-16 102.8 11.3 87 62-151 4-92 (97)
126 2kom_A Partitioning defective 99.3 8.3E-12 2.8E-16 106.8 12.1 90 61-151 29-119 (121)
127 3bpu_A Membrane-associated gua 99.3 7.5E-12 2.6E-16 100.7 11.2 80 65-151 6-85 (88)
128 3kzd_A TIAM-1, T-lymphoma inva 99.3 6.8E-12 2.3E-16 101.6 10.9 83 65-153 9-93 (94)
129 2d90_A PDZ domain containing p 99.3 4.3E-12 1.5E-16 105.2 9.9 83 63-152 7-89 (102)
130 3b76_A E3 ubiquitin-protein li 99.3 5.2E-12 1.8E-16 107.5 10.5 87 348-434 25-112 (118)
131 2yt7_A Amyloid beta A4 precurs 99.3 8.1E-12 2.8E-16 103.3 11.3 86 346-431 8-95 (101)
132 1z87_A Alpha-1-syntrophin; pro 99.3 1.4E-12 4.8E-17 126.0 7.4 88 63-154 78-165 (263)
133 3rle_A Golgi reassembly-stacki 99.3 6.9E-11 2.4E-15 111.1 18.8 60 89-151 15-75 (209)
134 1rgw_A ZAsp protein; PDZ, cyph 99.3 5.5E-12 1.9E-16 100.7 9.0 80 65-151 4-83 (85)
135 1qau_A Neuronal nitric oxide s 99.3 2E-11 6.9E-16 102.9 12.6 91 65-159 4-94 (112)
136 3sfj_A TAX1-binding protein 3; 99.3 1.6E-11 5.4E-16 102.1 11.7 84 65-150 7-103 (104)
137 1wfv_A Membrane associated gua 99.3 1.9E-12 6.5E-17 107.4 6.0 87 61-152 10-96 (103)
138 3cbz_A Dishevelled-2; PDZ doma 99.3 4.5E-12 1.5E-16 106.2 8.4 86 348-433 6-94 (108)
139 2eei_A PDZ domain-containing p 99.3 3.4E-12 1.2E-16 106.5 7.5 83 63-152 9-91 (106)
140 2vsv_A Rhophilin-2; scaffold p 99.3 1E-11 3.5E-16 104.0 10.3 82 64-154 25-106 (109)
141 2dls_A PDZ-rhogef, RHO guanine 99.3 1.8E-11 6.2E-16 99.5 11.4 77 65-152 11-87 (93)
142 2ejy_A 55 kDa erythrocyte memb 99.3 7.2E-12 2.4E-16 102.6 9.0 81 346-430 11-91 (97)
143 3khf_A Microtubule-associated 99.3 1.2E-11 4.2E-16 101.7 10.3 84 65-152 5-93 (99)
144 2vwr_A Ligand of NUMB protein 99.3 1.9E-11 6.4E-16 99.8 11.3 83 348-433 4-87 (95)
145 2iwo_A Multiple PDZ domain pro 99.3 6.1E-12 2.1E-16 107.5 8.4 88 346-433 23-111 (120)
146 1ujv_A Membrane associated gua 99.3 2.8E-11 9.5E-16 99.1 12.0 81 63-152 11-91 (96)
147 2pkt_A PDZ and LIM domain prot 99.3 1.8E-11 6.1E-16 99.1 10.8 81 65-152 6-86 (91)
148 2eeh_A PDZ domain-containing p 99.3 1.8E-11 6.1E-16 101.0 10.8 82 65-152 13-94 (100)
149 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.1E-11 3.8E-16 99.7 9.2 79 348-431 2-81 (88)
150 1ufx_A KIAA1526 protein; PDZ d 99.3 4.3E-12 1.5E-16 105.3 7.0 68 446-514 13-80 (103)
151 3k1r_A Harmonin; protein-prote 99.3 1.3E-11 4.5E-16 114.5 11.0 84 64-153 86-169 (192)
152 1x5q_A LAP4 protein; PDZ domai 99.3 3.8E-11 1.3E-15 100.9 12.8 84 65-152 18-105 (110)
153 2qg1_A Multiple PDZ domain pro 99.3 1.6E-11 5.5E-16 99.6 10.1 83 348-433 5-87 (92)
154 3o46_A Maguk P55 subfamily mem 99.3 1.7E-11 6E-16 99.6 10.1 82 347-432 4-85 (93)
155 1um7_A Synapse-associated prot 99.3 7.9E-12 2.7E-16 105.5 8.2 84 63-152 16-99 (113)
156 2eaq_A LIM domain only protein 99.3 1.4E-11 4.7E-16 99.5 9.3 85 61-151 2-88 (90)
157 1qav_A Alpha-1 syntrophin (res 99.3 2.1E-11 7.2E-16 98.5 10.2 83 348-433 5-88 (90)
158 1vb7_A PDZ and LIM domain 2; P 99.3 7.1E-12 2.4E-16 102.2 7.3 82 66-152 8-89 (94)
159 2edz_A PDZ domain-containing p 99.3 2.3E-11 7.8E-16 102.9 10.7 85 62-152 13-97 (114)
160 4e34_A Golgi-associated PDZ an 99.3 2.2E-11 7.5E-16 97.7 10.1 81 348-431 3-84 (87)
161 2dc2_A GOPC, golgi associated 99.3 2E-11 6.7E-16 101.4 9.9 85 346-434 8-94 (103)
162 1wi4_A Synip, syntaxin binding 99.3 2.6E-11 8.9E-16 101.7 10.6 76 347-424 15-90 (109)
163 1whd_A RGS3, regulator of G-pr 99.3 6.5E-12 2.2E-16 103.7 6.7 83 61-153 14-96 (100)
164 2eeg_A PDZ and LIM domain prot 99.3 1.8E-11 6.1E-16 99.8 9.1 82 63-151 9-90 (94)
165 3l4f_D SH3 and multiple ankyri 99.2 2.8E-11 9.4E-16 105.2 10.4 85 348-433 28-122 (132)
166 3tsv_A Tight junction protein 99.2 4.6E-11 1.6E-15 102.6 11.5 78 71-153 36-113 (124)
167 1g9o_A NHE-RF; PDZ domain, com 99.2 3.6E-11 1.2E-15 97.2 10.2 74 348-426 4-77 (91)
168 1ihj_A INAD; intermolecular di 99.2 3.5E-11 1.2E-15 98.7 10.2 88 346-433 4-95 (98)
169 2he4_A Na(+)/H(+) exchange reg 99.2 3.4E-11 1.2E-15 97.2 9.9 80 348-432 5-84 (90)
170 2awx_A Synapse associated prot 99.2 3.1E-11 1.1E-15 100.5 9.9 86 347-433 3-91 (105)
171 2kjd_A Sodium/hydrogen exchang 99.2 6.1E-11 2.1E-15 102.4 11.9 83 64-152 11-93 (128)
172 1m5z_A GRIP, AMPA receptor int 99.2 5.2E-11 1.8E-15 96.3 10.8 81 348-432 7-88 (91)
173 1ky9_A Protease DO, DEGP, HTRA 99.2 1.4E-12 4.8E-17 136.6 1.7 131 375-514 286-428 (448)
174 2jik_A Synaptojanin-2 binding 99.2 5.3E-11 1.8E-15 98.3 10.8 86 347-433 7-95 (101)
175 1wf7_A Enigma homologue protei 99.2 2.2E-11 7.5E-16 101.0 8.4 84 64-154 7-90 (103)
176 2byg_A Channel associated prot 99.2 4.4E-11 1.5E-15 101.6 10.3 87 346-433 23-112 (117)
177 2i1n_A Discs, large homolog 3; 99.2 5.6E-11 1.9E-15 98.3 10.7 85 348-433 5-92 (102)
178 1y7n_A Amyloid beta A4 precurs 99.2 4.7E-11 1.6E-15 96.4 10.0 73 66-150 15-88 (90)
179 2ego_A General receptor for ph 99.2 5.2E-11 1.8E-15 97.4 10.3 83 348-431 5-92 (96)
180 3hpk_A Protein interacting wit 99.2 6.4E-11 2.2E-15 101.9 11.3 85 348-434 20-104 (125)
181 3i4w_A Disks large homolog 4; 99.2 5.2E-11 1.8E-15 98.9 10.3 83 347-433 11-93 (104)
182 2e7k_A Maguk P55 subfamily mem 99.2 3.1E-11 1.1E-15 97.7 8.5 82 346-433 5-86 (91)
183 2fe5_A Presynaptic protein SAP 99.2 6.6E-11 2.2E-15 96.3 10.5 83 348-431 4-89 (94)
184 2edp_A Fragment, shroom family 99.2 2E-11 6.9E-16 100.7 7.3 83 65-152 12-94 (100)
185 2d8i_A T-cell lymphoma invasio 99.2 2.6E-11 8.9E-16 102.4 8.1 86 63-154 16-103 (114)
186 2q9v_A Membrane-associated gua 99.2 7.1E-11 2.4E-15 95.3 10.4 83 348-433 3-87 (90)
187 2lob_A Golgi-associated PDZ an 98.8 1.3E-12 4.4E-17 110.2 0.0 81 65-149 30-110 (112)
188 1q3o_A Shank1; PDZ, GKAP, pept 99.2 9.7E-11 3.3E-15 98.2 11.6 86 348-434 8-103 (109)
189 2fne_A Multiple PDZ domain pro 99.2 4E-11 1.4E-15 101.9 9.1 86 347-433 25-111 (117)
190 2ehr_A INAD-like protein; PDZ 99.2 4.1E-11 1.4E-15 101.8 9.2 86 348-433 16-108 (117)
191 3r68_A Na(+)/H(+) exchange reg 99.2 4.5E-11 1.5E-15 97.5 9.1 81 347-432 5-85 (95)
192 1wg6_A Hypothetical protein (r 99.2 2.8E-11 9.5E-16 104.5 8.2 85 349-433 27-120 (127)
193 1b8q_A Protein (neuronal nitri 99.2 3.2E-11 1.1E-15 104.1 8.4 92 64-159 10-101 (127)
194 2d92_A INAD-like protein; PDZ 99.2 4.6E-11 1.6E-15 100.0 8.8 84 348-432 16-102 (108)
195 1d5g_A Human phosphatase HPTP1 99.2 9.3E-11 3.2E-15 95.8 10.4 83 348-431 6-89 (96)
196 3e17_A Tight junction protein 99.2 6.5E-11 2.2E-15 95.2 9.2 62 447-516 10-71 (88)
197 2db5_A INAD-like protein; PDZ 99.2 4.6E-11 1.6E-15 103.2 9.0 87 347-433 25-113 (128)
198 1uez_A KIAA1526 protein; PDZ d 99.2 3.2E-11 1.1E-15 99.7 7.5 81 65-151 11-92 (101)
199 1x5n_A Harmonin; PDZ domain, u 99.2 8.6E-11 2.9E-15 99.3 10.4 82 64-151 17-98 (114)
200 1ujd_A KIAA0559 protein; PDZ d 99.2 4.2E-11 1.4E-15 101.8 8.4 86 348-433 13-107 (117)
201 1uit_A Human discs large 5 pro 99.2 1.2E-10 4E-15 99.0 11.2 82 65-154 22-103 (117)
202 1v62_A KIAA1719 protein; struc 99.2 5.1E-11 1.8E-15 101.2 8.9 85 347-432 15-99 (117)
203 1uhp_A Hypothetical protein KI 99.2 9.7E-11 3.3E-15 97.8 10.4 85 348-433 9-99 (107)
204 3egg_C Spinophilin; PP1, serin 99.2 7.4E-11 2.5E-15 106.8 10.2 85 348-433 81-169 (170)
205 1i16_A Interleukin 16, LCF; cy 99.2 4E-11 1.4E-15 103.9 8.0 85 348-433 30-116 (130)
206 2yuy_A RHO GTPase activating p 99.2 9.7E-12 3.3E-16 107.2 4.0 84 64-151 10-119 (126)
207 2qbw_A PDZ-fibronectin fusion 99.2 1.8E-10 6.1E-15 106.9 13.0 73 74-150 2-80 (195)
208 3ngh_A PDZ domain-containing p 99.2 7.2E-11 2.5E-15 98.4 9.1 82 348-433 2-83 (106)
209 1wf8_A Neurabin-I; PDZ domain, 99.2 1.1E-10 3.6E-15 97.6 10.0 85 348-433 10-98 (107)
210 2rcz_A Tight junction protein 99.2 1.7E-10 5.8E-15 90.9 10.6 73 68-150 7-79 (81)
211 2v90_A PDZ domain-containing p 99.2 8.8E-11 3E-15 96.0 9.2 84 347-433 3-87 (96)
212 1x6d_A Interleukin-16; PDZ dom 99.2 1.4E-10 4.7E-15 98.8 10.8 82 346-428 14-95 (119)
213 1wi2_A Riken cDNA 2700099C19; 99.2 1.3E-10 4.3E-15 96.6 10.1 81 348-432 16-96 (104)
214 2jil_A GRIP1 protein, glutamat 99.2 1.2E-10 4.3E-15 95.2 9.9 84 349-433 5-90 (97)
215 2opg_A Multiple PDZ domain pro 99.2 1.7E-10 5.7E-15 94.7 10.7 84 348-433 5-88 (98)
216 3qe1_A Sorting nexin-27, G pro 99.2 1.6E-10 5.4E-15 96.5 10.7 85 347-433 6-100 (107)
217 2la8_A Inactivation-NO-after-p 99.2 7.7E-11 2.6E-15 98.2 8.7 80 349-433 4-83 (106)
218 2eno_A Synaptojanin-2-binding 99.2 2.3E-10 8E-15 97.6 11.9 86 348-434 18-106 (120)
219 1nf3_C PAR-6B; semi-CRIB motif 99.2 9.1E-11 3.1E-15 101.3 9.4 88 346-433 28-123 (128)
220 2i04_A Membrane-associated gua 99.2 1.5E-10 5.3E-15 92.2 10.0 71 350-423 3-73 (85)
221 2dkr_A LIN-7 homolog B; LIN-7B 99.2 1E-10 3.6E-15 94.9 9.1 81 348-431 6-86 (93)
222 2vz5_A TAX1-binding protein 3; 99.2 2.1E-10 7.2E-15 100.5 11.6 93 65-159 26-131 (139)
223 2pa1_A PDZ and LIM domain prot 99.2 1.5E-10 5.1E-15 92.8 9.7 79 351-433 4-83 (87)
224 3nfk_A Tyrosine-protein phosph 99.2 1.4E-10 4.9E-15 96.7 10.0 76 347-425 17-94 (107)
225 2r4h_A Membrane-associated gua 99.1 1.5E-10 5.3E-15 97.4 10.1 84 346-432 23-106 (112)
226 2edv_A FERM and PDZ domain-con 99.1 2.3E-11 7.8E-16 99.6 4.8 78 65-152 11-89 (96)
227 3pv2_A DEGQ; trypsin fold, PDZ 99.1 2.6E-10 8.8E-15 119.5 13.9 139 90-248 282-431 (451)
228 3qik_A Phosphatidylinositol 3, 99.1 1.5E-10 5.2E-15 94.1 9.4 80 65-151 20-100 (101)
229 1wha_A KIAA0147 protein, scrib 99.1 8.2E-11 2.8E-15 97.9 8.1 85 348-433 8-96 (105)
230 1vae_A Rhophilin 2, rhophilin, 99.1 2.8E-11 9.7E-16 101.7 5.1 80 64-152 17-96 (111)
231 2o2t_A Multiple PDZ domain pro 99.1 6.3E-11 2.1E-15 100.6 7.3 87 347-433 20-108 (117)
232 2daz_A INAD-like protein; PDZ 99.1 1.8E-10 6.3E-15 98.8 10.3 84 348-433 26-109 (124)
233 4amh_A Disks large homolog 1; 99.1 1.1E-10 3.7E-15 97.4 8.5 78 355-433 9-90 (106)
234 1uep_A Membrane associated gua 99.1 1.1E-10 3.6E-15 96.9 8.4 83 348-433 10-94 (103)
235 2q3g_A PDZ and LIM domain prot 99.1 1.5E-10 5.2E-15 93.1 9.1 79 349-433 5-84 (89)
236 2d90_A PDZ domain containing p 99.1 1.2E-10 4.2E-15 96.3 8.7 80 347-431 6-85 (102)
237 2vsp_A PDZ domain-containing p 99.1 3.2E-11 1.1E-15 97.6 4.9 80 348-432 4-83 (91)
238 1uju_A Scribble; PDZ domain, c 99.1 3E-11 1E-15 101.6 4.9 83 348-430 10-99 (111)
239 4a8c_A Periplasmic PH-dependen 99.1 4.2E-10 1.4E-14 117.5 14.6 138 90-248 263-408 (436)
240 1n7e_A AMPA receptor interacti 99.1 2.2E-10 7.6E-15 93.8 10.0 82 348-432 6-87 (97)
241 2dlu_A INAD-like protein; PDZ 99.1 2.2E-10 7.5E-15 96.3 10.1 81 348-433 16-96 (111)
242 2cs5_A Tyrosine-protein phosph 99.1 1.7E-10 5.7E-15 98.3 9.4 76 347-425 15-92 (119)
243 3cyy_A Tight junction protein 99.1 3.5E-10 1.2E-14 91.5 10.8 79 65-153 5-84 (92)
244 1v5l_A PDZ and LIM domain 3; a 99.1 3.8E-11 1.3E-15 99.6 4.9 76 72-152 13-88 (103)
245 3axa_A Afadin, nectin-3, prote 99.1 2.1E-10 7.1E-15 95.6 9.4 84 348-433 12-96 (106)
246 1uf1_A KIAA1526 protein; PDZ d 99.1 4E-10 1.4E-14 97.2 11.5 84 65-154 23-106 (128)
247 2g5m_B Neurabin-2; spinophilin 99.1 2.5E-10 8.4E-15 96.3 9.9 84 349-433 6-93 (113)
248 2qkv_A Inactivation-NO-after-p 99.1 2.1E-10 7.2E-15 93.8 9.1 81 348-433 9-89 (96)
249 1um1_A KIAA1849 protein, RSGI 99.1 3.6E-10 1.2E-14 94.8 10.8 85 348-433 9-94 (110)
250 1va8_A Maguk P55 subfamily mem 99.1 2.5E-10 8.7E-15 96.3 9.7 81 347-432 25-105 (113)
251 2iwq_A Multiple PDZ domain pro 99.1 3.6E-10 1.2E-14 96.8 10.7 87 347-433 24-117 (123)
252 2csj_A TJP2 protein; PDZ domai 99.1 2E-10 6.8E-15 97.6 9.0 84 348-433 15-102 (117)
253 2gzv_A PRKCA-binding protein; 99.1 4E-10 1.4E-14 95.2 10.8 83 347-431 24-106 (114)
254 1wfg_A Regulating synaptic mem 99.1 2.8E-10 9.7E-15 98.6 10.1 81 353-433 42-125 (131)
255 2f5y_A Regulator of G-protein 99.1 2.9E-10 9.8E-15 92.0 9.3 78 348-433 4-81 (91)
256 2uzc_A Human pdlim5, PDZ and L 99.1 3E-10 1E-14 91.2 9.3 77 349-431 5-82 (88)
257 2fcf_A Multiple PDZ domain pro 99.1 3.3E-10 1.1E-14 93.8 9.8 86 348-433 5-97 (103)
258 1tp5_A Presynaptic density pro 99.1 3.8E-10 1.3E-14 96.0 10.4 83 347-433 14-96 (119)
259 1v6b_A Harmonin isoform A1; st 99.1 1.1E-10 3.7E-15 99.4 6.9 64 450-514 28-91 (118)
260 2eei_A PDZ domain-containing p 99.1 1.1E-10 3.6E-15 97.4 6.7 80 347-431 8-87 (106)
261 1q7x_A PDZ2B domain of PTP-BAS 99.1 2.5E-10 8.5E-15 95.5 9.0 85 348-433 10-100 (108)
262 2h2b_A Tight junction protein 99.1 4.6E-10 1.6E-14 93.6 10.6 84 348-433 8-95 (107)
263 1mfg_A ERB-B2 interacting prot 99.1 5.6E-10 1.9E-14 91.0 10.7 81 349-433 5-91 (95)
264 1uew_A Membrane associated gua 99.1 3.2E-10 1.1E-14 95.8 9.6 83 348-431 11-99 (114)
265 2jre_A C60-1 PDZ domain peptid 99.1 5.1E-10 1.7E-14 93.5 10.5 86 348-433 13-102 (108)
266 2dmz_A INAD-like protein; PDZ 99.1 3.9E-10 1.3E-14 97.5 10.0 86 348-433 16-104 (129)
267 3shw_A Tight junction protein 99.1 3.3E-10 1.1E-14 118.0 11.3 81 65-152 4-84 (468)
268 2djt_A Unnamed protein product 99.1 2.9E-10 1E-14 94.3 8.7 83 348-431 12-94 (104)
269 1wh1_A KIAA1095 protein; PDZ d 99.1 4.2E-10 1.4E-14 96.6 9.9 87 64-153 21-108 (124)
270 3kzd_A TIAM-1, T-lymphoma inva 99.1 2.2E-10 7.6E-15 92.6 7.6 62 450-513 20-81 (94)
271 1ueq_A Membrane associated gua 99.1 5.7E-10 1.9E-14 95.6 10.3 83 348-433 20-104 (123)
272 1rgw_A ZAsp protein; PDZ, cyph 99.1 2.5E-10 8.7E-15 90.9 7.2 77 349-431 3-80 (85)
273 2eeh_A PDZ domain-containing p 99.1 6.1E-10 2.1E-14 91.7 9.5 83 347-433 10-92 (100)
274 1z87_A Alpha-1-syntrophin; pro 99.1 2.7E-10 9.3E-15 110.0 8.4 84 348-434 78-162 (263)
275 4fln_A Protease DO-like 2, chl 99.0 1E-09 3.6E-14 116.2 13.5 153 359-516 253-462 (539)
276 2kpk_A Membrane-associated gua 99.0 5.9E-10 2E-14 96.4 9.4 83 348-433 19-103 (129)
277 3khf_A Microtubule-associated 99.0 4.7E-10 1.6E-14 92.1 8.3 82 350-433 5-91 (99)
278 2z17_A Pleckstrin homology SEC 99.0 5.1E-10 1.7E-14 92.9 8.5 78 348-426 16-98 (104)
279 2pkt_A PDZ and LIM domain prot 99.0 9.4E-10 3.2E-14 88.8 9.9 79 349-433 5-84 (91)
280 1v5q_A GRIP1 homolog, glutamat 99.0 1.1E-09 3.7E-14 93.7 10.7 86 348-433 16-105 (122)
281 2vsv_A Rhophilin-2; scaffold p 99.0 6.9E-10 2.4E-14 92.7 8.5 79 347-433 23-102 (109)
282 3tsz_A Tight junction protein 99.0 9.9E-10 3.4E-14 112.7 11.3 80 66-152 13-92 (391)
283 3soe_A Membrane-associated gua 99.0 1.3E-09 4.5E-14 91.1 10.0 77 348-433 13-91 (113)
284 2edz_A PDZ domain-containing p 99.0 7.6E-10 2.6E-14 93.5 8.7 82 348-433 14-95 (114)
285 2krg_A Na(+)/H(+) exchange reg 99.0 3E-10 1E-14 106.8 6.7 82 63-151 10-92 (216)
286 2w4f_A Protein LAP4; structura 99.0 1.3E-09 4.6E-14 89.0 9.9 83 349-433 5-91 (97)
287 2koj_A Partitioning defective 99.0 1.7E-09 5.9E-14 90.7 10.8 84 349-433 13-99 (111)
288 2kv8_A RGS12, regulator of G-p 99.0 1.7E-10 5.7E-15 91.6 4.2 76 348-431 3-78 (83)
289 3sfj_A TAX1-binding protein 3; 99.0 9.2E-10 3.1E-14 91.2 8.7 63 450-514 19-92 (104)
290 2edp_A Fragment, shroom family 99.0 7.8E-10 2.7E-14 91.1 8.2 81 348-433 10-92 (100)
291 2jxo_A Ezrin-radixin-moesin-bi 99.0 1.1E-09 3.8E-14 89.7 9.0 73 348-425 10-82 (98)
292 2dls_A PDZ-rhogef, RHO guanine 99.0 1.4E-09 4.6E-14 88.3 9.3 78 347-433 8-85 (93)
293 3bpu_A Membrane-associated gua 99.0 1.3E-09 4.6E-14 87.3 9.1 78 348-432 4-83 (88)
294 1n7t_A 99-MER peptide of densi 99.0 6.6E-10 2.3E-14 92.0 7.4 81 349-433 13-99 (103)
295 1qau_A Neuronal nitric oxide s 99.0 2.9E-09 9.7E-14 89.5 11.2 82 348-433 2-85 (112)
296 2dm8_A INAD-like protein; PDZ 99.0 5.1E-10 1.8E-14 94.8 6.5 83 348-432 18-100 (116)
297 2iwn_A Multiple PDZ domain pro 99.0 1.9E-09 6.4E-14 88.0 9.6 84 349-433 6-91 (97)
298 3qik_A Phosphatidylinositol 3, 99.0 9E-10 3.1E-14 89.6 7.5 62 447-514 25-86 (101)
299 1vb7_A PDZ and LIM domain 2; P 99.0 4E-10 1.4E-14 91.7 5.4 81 350-433 7-87 (94)
300 3k1r_A Harmonin; protein-prote 99.0 1.3E-09 4.6E-14 100.8 9.6 83 347-433 84-166 (192)
301 1x5q_A LAP4 protein; PDZ domai 99.0 2.6E-09 8.8E-14 89.5 10.4 83 349-433 17-103 (110)
302 2eeg_A PDZ and LIM domain prot 99.0 8.4E-10 2.9E-14 89.8 7.1 80 348-432 9-88 (94)
303 2lob_A Golgi-associated PDZ an 98.5 6.5E-11 2.2E-15 99.7 0.0 81 348-431 28-109 (112)
304 1wfv_A Membrane associated gua 99.0 8.6E-10 2.9E-14 91.2 6.5 82 349-433 13-94 (103)
305 1wf7_A Enigma homologue protei 99.0 1.1E-09 3.7E-14 90.7 7.0 79 348-431 6-84 (103)
306 2kom_A Partitioning defective 98.9 4.5E-09 1.5E-13 89.7 10.8 83 349-432 32-117 (121)
307 2yub_A LIMK-2, LIM domain kina 98.9 1.8E-09 6E-14 91.7 8.1 80 71-153 24-106 (118)
308 1um7_A Synapse-associated prot 98.9 5.4E-10 1.9E-14 94.1 4.9 81 348-432 16-96 (113)
309 1y7n_A Amyloid beta A4 precurs 98.9 5.7E-09 2E-13 84.0 9.6 72 350-431 14-86 (90)
310 1uez_A KIAA1526 protein; PDZ d 98.9 2.9E-09 9.9E-14 87.7 7.9 66 448-516 19-84 (101)
311 1x5n_A Harmonin; PDZ domain, u 98.9 5.4E-09 1.8E-13 88.1 9.4 73 348-423 16-88 (114)
312 2edv_A FERM and PDZ domain-con 98.9 9.6E-10 3.3E-14 89.8 4.5 78 348-433 9-87 (96)
313 2vz5_A TAX1-binding protein 3; 98.9 3.5E-09 1.2E-13 92.6 8.4 62 450-513 38-110 (139)
314 1v5l_A PDZ and LIM domain 3; a 98.9 1E-09 3.5E-14 90.8 4.4 66 447-515 12-77 (103)
315 2d8i_A T-cell lymphoma invasio 98.9 2.9E-09 9.9E-14 89.7 6.4 73 348-422 16-90 (114)
316 1wif_A RSGI RUH-020, riken cDN 98.9 2.3E-09 7.9E-14 91.8 5.9 80 348-433 28-109 (126)
317 2yuy_A RHO GTPase activating p 98.9 6.5E-10 2.2E-14 95.6 2.4 82 348-431 9-116 (126)
318 1uit_A Human discs large 5 pro 98.8 4.7E-09 1.6E-13 88.9 7.4 77 348-430 20-96 (117)
319 2eaq_A LIM domain only protein 98.8 1.8E-08 6.2E-13 80.9 10.5 78 350-433 6-87 (90)
320 1whd_A RGS3, regulator of G-pr 98.8 2.4E-09 8.3E-14 88.1 5.4 77 349-433 17-93 (100)
321 3tsv_A Tight junction protein 98.8 1.5E-08 5E-13 86.8 10.3 77 349-432 31-109 (124)
322 3cyy_A Tight junction protein 98.8 1.1E-08 3.8E-13 82.5 9.0 60 448-515 13-72 (92)
323 2kjd_A Sodium/hydrogen exchang 98.8 1.9E-08 6.5E-13 86.6 10.7 73 348-425 10-82 (128)
324 1ujv_A Membrane associated gua 98.8 2.7E-08 9.4E-13 81.1 10.4 76 348-432 11-88 (96)
325 2qbw_A PDZ-fibronectin fusion 98.8 1.4E-08 4.9E-13 93.9 9.7 73 359-433 2-80 (195)
326 1b8q_A Protein (neuronal nitri 98.8 6.3E-09 2.1E-13 89.5 6.7 73 347-423 8-81 (127)
327 1uf1_A KIAA1526 protein; PDZ d 98.8 1.1E-08 3.8E-13 88.1 8.3 64 449-515 31-94 (128)
328 1aqc_A X11; PTB domain; 2.30A 98.8 9.2E-10 3.2E-14 99.6 1.0 62 4-65 77-145 (172)
329 1vae_A Rhophilin 2, rhophilin, 98.8 3.7E-09 1.3E-13 88.7 4.6 79 348-434 16-95 (111)
330 1ky9_A Protease DO, DEGP, HTRA 98.8 1.7E-09 5.7E-14 113.2 2.8 132 90-248 286-428 (448)
331 2rcz_A Tight junction protein 98.8 3E-08 1E-12 77.8 9.4 72 352-431 6-77 (81)
332 3shw_A Tight junction protein 98.7 3E-08 1E-12 103.2 9.9 79 348-433 2-82 (468)
333 2krg_A Na(+)/H(+) exchange reg 98.7 1.5E-08 5.1E-13 95.2 6.1 75 348-427 10-84 (216)
334 3tsz_A Tight junction protein 98.7 5.4E-08 1.8E-12 99.8 9.9 80 347-433 9-90 (391)
335 1wh1_A KIAA1095 protein; PDZ d 98.6 8.1E-08 2.8E-12 82.2 8.0 82 350-433 22-105 (124)
336 2kjp_A Uncharacterized protein 98.6 3.2E-08 1.1E-12 79.8 4.6 65 91-159 2-66 (91)
337 2yub_A LIMK-2, LIM domain kina 98.6 1.1E-07 3.8E-12 80.5 7.5 82 351-433 19-103 (118)
338 2kl1_A YLBL protein; structure 98.5 2E-07 6.9E-12 75.5 7.3 68 89-160 4-71 (94)
339 3i18_A LMO2051 protein; alpha- 98.5 4.9E-07 1.7E-11 74.1 9.6 67 89-159 6-72 (100)
340 1fc6_A Photosystem II D1 prote 98.5 8.9E-07 3E-11 90.9 12.5 84 74-161 85-171 (388)
341 2pzd_A Serine protease HTRA2; 98.4 8.8E-07 3E-11 74.2 9.5 66 89-160 34-99 (113)
342 2i6v_A General secretion pathw 98.4 8.8E-07 3E-11 70.6 8.9 75 76-155 7-81 (87)
343 2l97_A HTRA, putative serine p 98.4 1.2E-06 4.3E-11 75.8 9.5 68 89-160 56-123 (134)
344 3id1_A Regulator of sigma E pr 98.4 1E-06 3.5E-11 71.5 7.8 58 92-152 4-61 (95)
345 2zpm_A Regulator of sigma E pr 98.3 1.5E-06 5E-11 69.8 7.3 65 92-160 6-70 (91)
346 2p3w_A Probable serine proteas 98.3 2.7E-06 9.3E-11 71.1 9.1 66 89-160 34-99 (112)
347 3id1_A Regulator of sigma E pr 98.2 1.5E-06 5.1E-11 70.5 5.8 44 468-514 4-47 (95)
348 2i4s_A General secretion pathw 98.2 3.9E-06 1.3E-10 69.3 7.9 63 90-155 37-99 (105)
349 1y8t_A Hypothetical protein RV 98.2 8E-06 2.7E-10 81.6 11.4 79 75-159 230-309 (324)
350 1te0_A Protease DEGS; two doma 98.2 9.1E-06 3.1E-10 81.0 11.7 84 74-160 221-311 (318)
351 2pzd_A Serine protease HTRA2; 98.2 2.6E-06 8.8E-11 71.3 6.5 45 466-513 35-79 (113)
352 4fgm_A Aminopeptidase N family 98.2 5.2E-06 1.8E-10 89.6 10.2 77 75-160 486-562 (597)
353 2hga_A Conserved protein MTH13 98.2 1.2E-05 3.9E-10 68.7 10.3 66 89-160 24-89 (125)
354 2kjp_A Uncharacterized protein 98.1 6.3E-07 2.2E-11 72.1 2.1 44 467-514 2-45 (91)
355 3k50_A Putative S41 protease; 98.1 2.8E-06 9.6E-11 87.1 7.4 74 73-152 73-146 (403)
356 3i18_A LMO2051 protein; alpha- 98.1 3.2E-06 1.1E-10 69.1 6.4 44 466-513 7-50 (100)
357 2i6v_A General secretion pathw 98.1 2.4E-06 8.1E-11 68.0 5.0 44 467-513 20-63 (87)
358 3stj_A Protease DEGQ; serine p 98.1 8.6E-06 2.9E-10 82.1 9.8 68 90-160 263-330 (345)
359 2zpm_A Regulator of sigma E pr 98.1 2.6E-06 8.9E-11 68.3 4.6 44 468-514 6-49 (91)
360 2kl1_A YLBL protein; structure 98.1 2.2E-06 7.5E-11 69.3 4.0 45 466-514 5-49 (94)
361 4fln_A Protease DO-like 2, chl 98.1 1.9E-05 6.5E-10 83.6 12.2 167 74-248 253-460 (539)
362 2p3w_A Probable serine proteas 98.1 5.6E-06 1.9E-10 69.2 6.5 45 466-513 35-79 (112)
363 2l97_A HTRA, putative serine p 98.0 5E-06 1.7E-10 71.9 5.9 45 466-514 57-101 (134)
364 1fc6_A Photosystem II D1 prote 97.9 1.5E-05 5.1E-10 81.8 8.2 61 450-513 85-145 (388)
365 2i4s_A General secretion pathw 97.9 8.2E-06 2.8E-10 67.3 4.8 44 467-513 38-81 (105)
366 4dbb_A Amyloid beta A4 precurs 97.9 2.5E-06 8.6E-11 76.2 1.6 52 4-65 66-117 (162)
367 3qo6_A Protease DO-like 1, chl 97.9 3.3E-05 1.1E-09 77.9 8.9 68 90-160 251-329 (348)
368 1lcy_A HTRA2 serine protease; 97.8 4.4E-05 1.5E-09 76.2 9.3 65 90-160 256-320 (325)
369 2hga_A Conserved protein MTH13 97.7 6.2E-05 2.1E-09 64.1 6.8 44 466-513 25-68 (125)
370 3k50_A Putative S41 protease; 97.7 3.6E-05 1.2E-09 78.9 5.7 61 449-513 73-133 (403)
371 2ej8_A DCC-interacting protein 97.6 1.3E-05 4.4E-10 71.5 1.8 54 3-64 69-125 (160)
372 3stj_A Protease DEGQ; serine p 97.6 7.8E-05 2.7E-09 75.0 7.1 72 359-433 240-320 (345)
373 1lcy_A HTRA2 serine protease; 97.6 7.9E-05 2.7E-09 74.4 6.5 46 466-514 256-301 (325)
374 1y8t_A Hypothetical protein RV 97.6 0.00013 4.4E-09 72.8 8.0 67 359-431 229-297 (324)
375 2ela_A Adapter protein contain 97.6 1.9E-05 6.7E-10 71.3 1.7 54 3-64 82-138 (175)
376 1te0_A Protease DEGS; two doma 97.5 0.00017 5.7E-09 71.8 8.2 70 359-431 221-299 (318)
377 4fgm_A Aminopeptidase N family 97.4 9.2E-05 3.2E-09 79.8 5.5 55 450-513 485-539 (597)
378 1k32_A Tricorn protease; prote 97.4 0.00055 1.9E-08 79.0 11.5 78 74-160 737-824 (1045)
379 3qo6_A Protease DO-like 1, chl 97.3 0.00016 5.6E-09 72.8 5.1 45 466-513 251-306 (348)
380 3num_A Serine protease HTRA1; 97.3 3.6E-05 1.2E-09 77.2 0.0 64 90-159 254-317 (332)
381 3num_A Serine protease HTRA1; 97.1 6.4E-05 2.2E-09 75.3 0.0 45 466-513 254-298 (332)
382 4dbb_A Amyloid beta A4 precurs 96.0 0.00093 3.2E-08 59.4 -0.6 124 200-335 39-162 (162)
383 1n3h_A SHC transforming protei 95.9 0.0017 5.8E-08 60.0 0.6 45 4-62 133-181 (207)
384 1k32_A Tricorn protease; prote 95.8 0.0088 3E-07 68.9 6.3 56 450-513 737-801 (1045)
385 3f0w_A NUMB-R, NUMB-like prote 95.7 0.0033 1.1E-07 56.2 1.9 49 3-64 90-141 (168)
386 1p3r_A Disabled homolog 2; PTB 95.2 0.0047 1.6E-07 54.7 1.1 47 3-64 72-121 (160)
387 1aqc_A X11; PTB domain; 2.30A 95.2 0.0036 1.2E-07 56.1 0.4 109 207-315 56-171 (172)
388 3so6_A LDL receptor adaptor pr 94.9 0.0099 3.4E-07 51.0 2.1 48 4-64 57-107 (137)
389 1ntv_A Disabled homolog 1; bet 92.6 0.032 1.1E-06 48.8 1.2 34 4-37 74-110 (152)
390 3d8d_A Amyloid beta A4 precurs 51.3 6.3 0.00022 33.7 1.9 49 2-63 66-119 (148)
391 1pqh_A Aspartate 1-decarboxyla 42.4 60 0.002 27.2 6.4 47 63-118 58-105 (143)
392 1vc3_B L-aspartate-alpha-decar 40.2 42 0.0014 26.2 4.8 48 63-119 17-65 (96)
393 3oug_A Aspartate 1-decarboxyla 38.3 55 0.0019 26.4 5.3 46 64-118 45-91 (114)
394 1wgu_A APBB2, amyloid beta (A4 37.2 4.2 0.00014 34.4 -1.4 45 5-64 68-116 (136)
395 3dor_A Protein CT_858, CPAF; m 32.8 50 0.0017 34.8 5.5 41 75-124 85-125 (583)
396 2ej8_A DCC-interacting protein 32.7 9 0.00031 33.2 -0.1 88 217-312 59-150 (160)
397 2ela_A Adapter protein contain 30.1 11 0.00037 33.3 0.0 36 277-312 127-163 (175)
398 3plx_B Aspartate 1-decarboxyla 29.5 69 0.0023 25.3 4.5 57 63-132 17-74 (102)
399 2j3t_D Trafficking protein par 28.1 41 0.0014 30.7 3.5 63 66-140 26-91 (219)
400 2c45_A Aspartate 1-decarboxyla 27.8 70 0.0024 26.7 4.5 56 64-131 42-98 (139)
401 3dor_A Protein CT_858, CPAF; m 24.7 65 0.0022 33.9 4.7 28 467-499 97-124 (583)
402 2ysz_A Amyloid beta A4 precurs 24.7 11 0.00038 33.6 -1.0 46 5-64 68-116 (185)
No 1
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=100.00 E-value=2.9e-35 Score=303.57 Aligned_cols=225 Identities=51% Similarity=0.772 Sum_probs=131.0
Q ss_pred cccchhhhhhhhccccccceeeecCcEEEEEEeecCCCCCC---C----CCCCCCCCCccccccccce------------
Q psy3479 4 FNDRVHKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEA---D----EPPKISRTPKMICHVFESD------------ 64 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~---~----~~~~~~~~~~~~~~vf~s~------------ 64 (518)
+-+.-|||+||+|+||+|||+||+++++++|||++...... . .+...+++++|+||||+++
T Consensus 79 v~~~~t~~~~~~~~l~~IS~~~d~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ChvF~s~~a~~i~~ti~qa 158 (388)
T 3suz_A 79 VLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQA 158 (388)
T ss_dssp EEETTTCCEEEEEEGGGEEEEEECSSEEEEEEEECCCCCC-------------CCCCEEEEEEEEECTTHHHHHHHHHHH
T ss_pred EEecCCcChhhhccccceeEEeecCceEEEEEecCCCccccccccccCccccccccccceEEEEecccCHHHHHHHHHHH
Confidence 34455899999999999999999999999999998865432 1 1134678999999999987
Q ss_pred ------------------------------------------------eEEEEccCCcceeEEEEecCCcCCCCcEEEEE
Q psy3479 65 ------------------------------------------------EVVVPKAKGEILGVVIVESGWGSMLPTVVIAN 96 (518)
Q Consensus 65 ------------------------------------------------~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~ 96 (518)
+|+|.|.+|++|||+|.+.++|...++++|.+
T Consensus 159 f~~~y~~~l~~~gi~~~~~~~~~y~~~~~~~~~~~d~~~~~~~~~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~ 238 (388)
T 3suz_A 159 FSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILAN 238 (388)
T ss_dssp HHHHHHHHHHHHTCCTTTSCHHHHHHHHHHHHHHHHHHHHTCCSSCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCC
T ss_pred HHHHhhhhccccCcCccccchhhhcccccccccccchhhhhcccccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEe
Confidence 38999998999999999888877788899999
Q ss_pred ecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEeeCCCCccccceEecCCC
Q psy3479 97 LAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIKRPDTKYQLGFSVQNGV 176 (518)
Q Consensus 97 v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~rp~~~~~~g~~v~~~~ 176 (518)
|.|||||+++|+|++||+|++|||+++.+++|.+++.+|+..+.+..|+|+|.|.++..++.+.+++...++||++.++
T Consensus 239 V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g- 317 (388)
T 3suz_A 239 MMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNG- 317 (388)
T ss_dssp CCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC---------------------
T ss_pred eCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeEeecCCCCccceEEecC-
Confidence 9999999999999999999999999999999999999999987667899999999888888887777777788876542
Q ss_pred CCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcccccccEEE
Q psy3479 177 APEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVV 256 (518)
Q Consensus 177 ~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~lvv 256 (518)
+|..|. |+++|+.. +|+.||+|++|||.++.+.+|+++++.++.......+.+
T Consensus 318 -----------------------~I~~V~-~gs~A~~a---GL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V 370 (388)
T 3suz_A 318 -----------------------IICSLM-RGGIAERG---GVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKT 370 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------EEEEee-cCCHHHHc---CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 566676 89999887 499999999999999999999999999987644443333
No 2
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.97 E-value=1.6e-28 Score=272.49 Aligned_cols=326 Identities=24% Similarity=0.370 Sum_probs=217.9
Q ss_pred cccceeEEEEccCCcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy3479 60 VFESDEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 136 (518)
Q Consensus 60 vf~s~~v~l~k~~~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~ 136 (518)
.++..+|.|.|..+ +|||+|.++... ....+++|..|.+||||+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 57 ~~~~~~v~l~k~~~-glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 135 (721)
T 2xkx_A 57 EMEYEEITLERGNS-GLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 135 (721)
T ss_pred CceEEEEEEEeCCC-CCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 45556799999886 599999964321 12568999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEeCCce----eEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCC
Q psy3479 137 NSKNQTVVKLTVVPCAPV----VEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQ 212 (518)
Q Consensus 137 ~~~~~~~v~l~v~~~~~~----~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~ 212 (518)
.++. .|+|+|.|..+. .++.+.+ ...++||++.++....+. |+ ..|++|+.|. ++++|+
T Consensus 136 ~~g~--~v~l~v~R~~~~~~~~~~v~l~k--~~~~lG~~i~~~~~~~~~--~~----------~~gv~V~~V~-~gs~A~ 198 (721)
T 2xkx_A 136 EAGS--IVRLYVMRRKPPAEKVMEIKLIK--GPKGLGFSIAGGVGNQHI--PG----------DNSIYVTKII-EGGAAH 198 (721)
T ss_pred cccc--ccceEEEecccccccceeeeeee--ecCCCceeeccCCCcccc--CC----------CCceEEEEeC-CCCchh
Confidence 9874 899999887543 4566653 345699999876554331 21 1689999998 999998
Q ss_pred CCCccceeeeceEEEEcccchhhhhHHHHHHHhhcccccccEEEEEeecccCCCCCCCCCCCCCCCccccccccCchhhh
Q psy3479 213 PSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQF 292 (518)
Q Consensus 213 ~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (518)
.. |+|+.||.|++|||.++.+.+|.+++..++...+...+.+.+...... .+...++........ . .......
T Consensus 199 ~a--G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~-~~~~~~p~~~~~~s~--~-~~~~~~~- 271 (721)
T 2xkx_A 199 KD--GRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYL-SDSYAPPDITTSYSQ--H-LDNEISH- 271 (721)
T ss_pred hc--CCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccc-cCCCCCCCcccCCCC--C-cccccCC-
Confidence 88 679999999999999999999999999998764434444433221110 000001100000000 0 0000000
Q ss_pred HhhhccchhhhhhHHHHhhCCCCCCCCccccchhhhcccccccccccccccccCccEEEEEeCCCCCceeEEEEeCCCCC
Q psy3479 293 IAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWGS 372 (518)
Q Consensus 293 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~k~~~~~lG~~i~~~~~g~ 372 (518)
....++ .+. ...++. .+..+.+.. ........ + ....+.|.|.+. ..+|||++.+ +.
T Consensus 272 -~~~~~~----~~~-----~~~~~~---~~~~~~p~~--~~~~~~~~--~--~~~~~~v~l~~~-~~~lG~~i~~---~~ 328 (721)
T 2xkx_A 272 -SSYLGT----DYP-----TAMTPT---SPRRYSPVA--KDLLGEED--I--PREPRRIVIHRG-STGLGFNIVG---GE 328 (721)
T ss_pred -cccccc----ccc-----ccCCCC---CCcccCCcc--cccccccc--c--ccceEEEEEEEC-CCCccEEEec---cC
Confidence 000000 000 000000 000011100 00000000 0 112467888884 5689999975 22
Q ss_pred cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCeeEEE
Q psy3479 373 MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPTSMFR 433 (518)
Q Consensus 373 ~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~~v~r 433 (518)
...|++|..|.++|+|+++|+|++||+|++|||.++.+++++++..+|+..++.+.+.+.|
T Consensus 329 ~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r 389 (721)
T 2xkx_A 329 DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY 389 (721)
T ss_pred CCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEe
Confidence 2458999999999999999999999999999999999999999999999887765555543
No 3
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.96 E-value=1.1e-30 Score=269.35 Aligned_cols=297 Identities=49% Similarity=0.770 Sum_probs=185.0
Q ss_pred CCCCCCCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcccccccEEEEEeecccCCCCC-------CCCCCCCCCCc
Q psy3479 207 PEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEA-------DEPPKISRTPK 279 (518)
Q Consensus 207 p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~lvv~~~~~~~~~~~~-------~~~~~~~~~~~ 279 (518)
|.+...+..+..|.+..+-+.|...+.+...+++.++.+.++.+..+....+++++...... +........++
T Consensus 58 ~~~~~~~~~~v~l~IS~~gi~v~~~~t~~~~~~~~l~~IS~~~d~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (388)
T 3suz_A 58 SEGDAQTLTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYK 137 (388)
T ss_dssp SSCCCCSSEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSEEEEEEEECCCCCC-------------CCCCEE
T ss_pred CcccccccceEEEEEEeceEEEEecCCcChhhhccccceeEEeecCceEEEEEecCCCccccccccccCccccccccccc
Confidence 56666666677899999999998888888888889999999999999999988865332110 01122345678
Q ss_pred cccccccCchhhhHhhhccchhhhhhHHHHhhCCCCCCCCccccchhhhcccccccccccccccccCccEEEEEeCCCCC
Q psy3479 280 MICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGE 359 (518)
Q Consensus 280 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~k~~~~ 359 (518)
+.||+|.+++++.++.+++++|+..|++|++.+++.+... ....|..+...+.++.+++..|..++..++|.+.|..++
T Consensus 138 ~~ChvF~s~~a~~i~~ti~qaf~~~y~~~l~~~gi~~~~~-~~~~y~~~~~~~~~~~d~~~~~~~~~~~~~V~i~k~~ge 216 (388)
T 3suz_A 138 MICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDL-SQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGE 216 (388)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHHHHHHHHTCCTTTS-CHHHHHHHHHHHHHHHHHHHHTCCSSCCEEEEECCCSSC
T ss_pred eEEEEecccCHHHHHHHHHHHHHHHhhhhccccCcCcccc-chhhhcccccccccccchhhhhcccccceEEEEECCCCC
Confidence 8999999999999999999999999999999988886555 667899888888888888888888888999999998788
Q ss_pred ceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc--CCeeEEEeeee
Q psy3479 360 ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT--MPTSMFRLLTG 437 (518)
Q Consensus 360 ~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~--v~~~v~r~~~~ 437 (518)
+|||+|.+..+|...++++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++..... +.+.+.|- .
T Consensus 217 ~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~--~ 294 (388)
T 3suz_A 217 ILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC--P 294 (388)
T ss_dssp CCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEEC--C
T ss_pred ceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccc--c
Confidence 9999999866666677899999999999999999999999999999999999999999999876332 44444331 1
Q ss_pred cccceec-cCCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcCC
Q psy3479 438 QETPVVV-PKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 438 ~~~~~~~-~~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~~ 516 (518)
....+.+ .......|||.+. + .+|.+|.++|+|+++| |++||+|++|||+++.+++|++++++|++++.
T Consensus 295 ~~~~v~l~~~~~~~~lG~~i~-~--------g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~ 364 (388)
T 3suz_A 295 PVTTVLIKRPDLKYQLGFSVQ-N--------GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVG 364 (388)
T ss_dssp SCC-----------------------------------------------------------------------------
T ss_pred ccceeeEeecCCCCccceEEe-c--------CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 1111222 1223356888775 1 2899999999999999 99999999999999999999999999998764
No 4
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.94 E-value=3e-25 Score=246.28 Aligned_cols=259 Identities=24% Similarity=0.306 Sum_probs=191.2
Q ss_pred eEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchh
Q psy3479 155 VEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLK 234 (518)
Q Consensus 155 ~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~ 234 (518)
.++.+.|. ..+|||++.+|..+.+.. ...+++|..|. |+++|+.+ |+|+.||.|++|||.++.
T Consensus 61 ~~v~l~k~--~~glGf~i~gg~~~~~~~------------~~~g~~V~~v~-~gspA~~a--G~L~~GD~Il~Vng~~v~ 123 (721)
T 2xkx_A 61 EEITLERG--NSGLGFSIAGGTDNPHIG------------DDPSIFITKII-PGGAAAQD--GRLRVNDSILFVNEVDVR 123 (721)
T ss_pred EEEEEEeC--CCCCCEEEeCCcCCcccC------------CCCCeEEEEeC-CCCHHHhc--CCCCCCCEEEEECCEECC
Confidence 34566642 359999999987643310 01579999998 99999888 679999999999999999
Q ss_pred hhhHHHHHHHhhcccccccEEEEEeecccCCCCCCCCCCCCCCCccccccccCchhhhHhhhccchhhhhhHHHHhhCCC
Q psy3479 235 EIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGI 314 (518)
Q Consensus 235 ~~~~~eav~~lk~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 314 (518)
+++|.+++.+++...+...+.+.+.. + .
T Consensus 124 ~~~~~~~~~~l~~~g~~v~l~v~R~~---~------~------------------------------------------- 151 (721)
T 2xkx_A 124 EVTHSAAVEALKEAGSIVRLYVMRRK---P------P------------------------------------------- 151 (721)
T ss_pred CCCHHHHHHHhhccccccceEEEecc---c------c-------------------------------------------
Confidence 99999999999876443344432110 0 0
Q ss_pred CCCCCccccchhhhcccccccccccccccccCccEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhc
Q psy3479 315 EDHSFVKEMDYQEVLNSQEIFGDELQMFAKKELQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARC 391 (518)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~ 391 (518)
.+...+|.|.+. ..+|||++.++... ....|++|..|.++|+|+++
T Consensus 152 ------------------------------~~~~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~a 200 (721)
T 2xkx_A 152 ------------------------------AEKVMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKD 200 (721)
T ss_pred ------------------------------cccceeeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhc
Confidence 000125666663 45799999862111 11348999999999999999
Q ss_pred CCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCeeEEEeeeec----------c----------------------
Q psy3479 392 GQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPTSMFRLLTGQ----------E---------------------- 439 (518)
Q Consensus 392 G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~~v~r~~~~~----------~---------------------- 439 (518)
|+|+.||+|++|||+++.+++|.++..+++..+..+.+.+.|-.... .
T Consensus 201 G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~ 280 (721)
T 2xkx_A 201 GRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYP 280 (721)
T ss_pred CCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCccccccccc
Confidence 99999999999999999999999999999887776666665421100 0
Q ss_pred -----------cc----------------eeccCCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEE
Q psy3479 440 -----------TP----------------VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQII 492 (518)
Q Consensus 440 -----------~~----------------~~~~~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il 492 (518)
.+ .+...+...+|||.+. ++. ...+++|.+|.++|+|+++|+|++||+|+
T Consensus 281 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~-~~~--~~~gv~V~~V~~gs~A~~aG~L~~GD~Il 357 (721)
T 2xkx_A 281 TAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIV-GGE--DGEGIFISFILAGGPADLSGELRKGDQIL 357 (721)
T ss_pred ccCCCCCCcccCCcccccccccccccceEEEEEEECCCCccEEEe-ccC--CCCCeEEEEeCCCChHHhcCCCccCCEEE
Confidence 00 0000112356899886 221 23579999999999999999999999999
Q ss_pred EECCEeCCCCCHHHHHHHhhhcCC
Q psy3479 493 AVNGVSLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 493 ~VNg~~v~~~s~~e~v~~lk~~~~ 516 (518)
+|||+++.++++++++++|++.+.
T Consensus 358 ~VNg~~v~~~~~~e~~~~l~~~~~ 381 (721)
T 2xkx_A 358 SVNGVDLRNASHEQAAIALKNAGQ 381 (721)
T ss_pred EECCEECCCCCHHHHHHHHHhcCC
Confidence 999999999999999999998764
No 5
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.90 E-value=1.2e-22 Score=189.73 Aligned_cols=167 Identities=25% Similarity=0.307 Sum_probs=131.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
.++|+|.|. +.+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+
T Consensus 6 ~~~v~l~~~-~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 6 YEEITLERG-NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEECB-TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEEC-CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 468999995 67899999973221 12458999999999999999999999999999999999999999999998887
Q ss_pred CcCCeeEEEeeeecccceec-cCCCCccccEEEEecCCCC----CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy3479 425 KTMPTSMFRLLTGQETPVVV-PKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 499 (518)
Q Consensus 425 ~~v~~~v~r~~~~~~~~~~~-~~~~~~~lG~~i~~~g~~~----~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v 499 (518)
..+.+.+.|-....+....+ .......|||.+... ... ...+++|.+|.|+|||+++|+|++||+|++|||+++
T Consensus 85 ~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~-~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v 163 (196)
T 3gsl_A 85 SIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGG-VGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGL 163 (196)
T ss_dssp SEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEES-BTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC
T ss_pred CcEEEEEEecCCCccccEEEEEecCCCCceEEEEcc-CCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcC
Confidence 77666665532211111111 122234899999732 222 124789999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCC
Q psy3479 500 VGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 500 ~~~s~~e~v~~lk~~~~ 516 (518)
.+++|++++++|+++++
T Consensus 164 ~~~~~~~~~~~l~~~~~ 180 (196)
T 3gsl_A 164 EDVMHEDAVAALKNTYD 180 (196)
T ss_dssp SSCBHHHHHHHHHSCCE
T ss_pred CCCCHHHHHHHHHcCCC
Confidence 99999999999987653
No 6
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.89 E-value=2.2e-22 Score=189.71 Aligned_cols=163 Identities=21% Similarity=0.276 Sum_probs=130.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccC--CChHHHHHHHHHhcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG--LPLSTCQTYIKILMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~--~s~~~~~~~l~~~~~ 425 (518)
...|+|.| .+.+|||+|.++.......+++|..|.++|||+++|+|+.||+|++|||+++.+ ++|.++..+++..+.
T Consensus 19 ~~~v~~~~-~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~ 97 (206)
T 3r0h_A 19 KILIELKV-EKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYE 97 (206)
T ss_dssp CEEEEEEC-TTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCS
T ss_pred EEEEEEEe-CCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCC
Confidence 45788988 478999999873221112489999999999999998899999999999999999 889999999988777
Q ss_pred c-CCeeEEEeeeecc--cceeccCCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCC
Q psy3479 426 T-MPTSMFRLLTGQE--TPVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGL 502 (518)
Q Consensus 426 ~-v~~~v~r~~~~~~--~~~~~~~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~ 502 (518)
. +.+.+.|-..... ..+.+.+.....|||.+.. ...+++|.+|.++|+|+++|+|++||+|++|||+++.++
T Consensus 98 ~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~-----~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~ 172 (206)
T 3r0h_A 98 KAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSP-----NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGL 172 (206)
T ss_dssp SEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEE-----CSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTC
T ss_pred CceEEEEEecccCCCcEEEEEEecCCCCccCeEEEc-----CCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 6 6666654321111 1122233445689999973 224799999999999999998999999999999999999
Q ss_pred CHHHHHHHhhhcCC
Q psy3479 503 PLSTCQTYIKVNHH 516 (518)
Q Consensus 503 s~~e~v~~lk~~~~ 516 (518)
++++++.+|++.+.
T Consensus 173 ~~~~~~~~l~~~~~ 186 (206)
T 3r0h_A 173 PFQVCYALFKGANG 186 (206)
T ss_dssp CHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998653
No 7
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.86 E-value=8.7e-21 Score=177.98 Aligned_cols=164 Identities=27% Similarity=0.366 Sum_probs=129.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|..+.+|||+|.++.. ...+++|..|.++|||++++.|+.||+|++|||+++.+++|.++..+++..+..+
T Consensus 8 ~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 8 STVVELMKKEGTTLGLTVSGGID--KDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp EEEEEEECCTTCCCCEEEECCTT--SSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEeCCCCCCCEEEecccC--CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46789988788999999986221 1236899999999999999339999999999999999999999999998877776
Q ss_pred CeeEEEeeee----------cccceeccCCCCccccEEEEecCCCCC---CCcEEEEEECCCChhhhcCCCCCCCEEEEE
Q psy3479 428 PTSMFRLLTG----------QETPVVVPKAKGEILGVVIVESGWGSM---LPTVVIANLAPAGAAARCGQLNIGDQIIAV 494 (518)
Q Consensus 428 ~~~v~r~~~~----------~~~~~~~~~~~~~~lG~~i~~~g~~~~---~~~i~I~~V~~gs~A~~aG~L~~GD~Il~V 494 (518)
.+.+.|-... ....+.+ ......|||.+.. +.... ..+++|.+|.++|+|+++|+|++||+|++|
T Consensus 86 ~l~v~R~~~~~~~~g~~~~~~~~~v~l-~~~~~~lG~~l~~-g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~i 163 (200)
T 2qt5_A 86 VLEVEYELPPVSIQGSSVMFRTVEVTL-HKEGNTFGFVIRG-GAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSV 163 (200)
T ss_dssp EEEEEEECCCCCCCCSSEEEEEEEEEE-ECBTTBCSEEEEE-ECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEE
T ss_pred EEEEeccCCCcccCCCccceeEEEEEE-ecCCCCeEEEEEC-CCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 6666553210 1111122 2345779999873 32211 247899999999999999999999999999
Q ss_pred CCEeCCCCCHHHHHHHhhhcC
Q psy3479 495 NGVSLVGLPLSTCQTYIKVNH 515 (518)
Q Consensus 495 Ng~~v~~~s~~e~v~~lk~~~ 515 (518)
||+++.++++++++++|+..+
T Consensus 164 ng~~v~~~~~~~~~~~l~~~~ 184 (200)
T 2qt5_A 164 DGIRLLGTTHAEAMSILKQCG 184 (200)
T ss_dssp TTEECTTCCHHHHHHHHHTTC
T ss_pred CCEECCCCCHHHHHHHHHcCC
Confidence 999999999999999999754
No 8
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.86 E-value=7e-21 Score=178.08 Aligned_cols=169 Identities=20% Similarity=0.336 Sum_probs=131.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC--cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL-- 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~--~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~-- 423 (518)
.++|.|.|....+|||++.++.... ...+++|..|.++|||+++|+|+.||+|++|||+++.+++|.++..+++..
T Consensus 7 ~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 7 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp EEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3578999987799999999842211 245799999999999999999999999999999999998999999999876
Q ss_pred cCcCCeeEEEeeeec------ccceeccCCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCE
Q psy3479 424 MKTMPTSMFRLLTGQ------ETPVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 497 (518)
Q Consensus 424 ~~~v~~~v~r~~~~~------~~~~~~~~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~ 497 (518)
+..+.+.+.|-.... ...+.+.......|||.+..........+++|.+|.++|||+++|+|++||+|++|||+
T Consensus 87 g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~ 166 (196)
T 1p1d_A 87 TSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNI 166 (196)
T ss_dssp SSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTE
T ss_pred CCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCE
Confidence 455555554422110 11122233345679999973211112357899999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHhhhcCC
Q psy3479 498 SLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 498 ~v~~~s~~e~v~~lk~~~~ 516 (518)
++.+++++++.++|++++.
T Consensus 167 ~v~~~~~~~~~~~l~~~~~ 185 (196)
T 1p1d_A 167 RLDSCSMEDAVQILQQCED 185 (196)
T ss_dssp EGGGCCHHHHHHHHHHCTT
T ss_pred ECCCCCHHHHHHHHHhCCC
Confidence 9999999999999998643
No 9
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.85 E-value=7.2e-21 Score=177.59 Aligned_cols=170 Identities=25% Similarity=0.403 Sum_probs=136.0
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
++.++|+|.|..++ |||+|.++.... ..++++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~~v~l~~~~~~-lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 4 MEYEEITLERGNSG-LGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEEECBTTB-SSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cEEEEEEEEECCCC-CCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34567999998655 999999644211 25689999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeCCce----eEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCC
Q psy3479 138 SKNQTVVKLTVVPCAPV----VEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQP 213 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~~~----~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~ 213 (518)
.++ .|+|+|.|..+. ..+.+.+ ...++||++.++...... +. ..+++|..|. |+++|+.
T Consensus 83 ~g~--~v~l~v~r~~~~~~~~~~v~l~~--~~~~lG~~~~~~~~~~~~--~~----------~~gv~V~~V~-~gs~A~~ 145 (196)
T 3gsl_A 83 AGS--IVRLYVMRRKPPAEKVMEIKLIK--GPKGLGFSIAGGVGNQHI--PG----------DNSIYVTKII-EGGAAHK 145 (196)
T ss_dssp SCS--EEEEEEEEECCCCEEEEEEEEEE--BTTBSCEEEEESBTSCSB--TT----------BCCEEEEEEC-TTSHHHH
T ss_pred CCC--cEEEEEEecCCCccccEEEEEec--CCCCceEEEEccCCCcCC--CC----------CCCEEEEEEC-CCChHHh
Confidence 874 899999886532 2344442 334789998765432221 11 1578999998 9999988
Q ss_pred CCccceeeeceEEEEcccchhhhhHHHHHHHhhcccc
Q psy3479 214 STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIAD 250 (518)
Q Consensus 214 ~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~ 250 (518)
. |.|+.||.|++|||.++.+++++++++.++....
T Consensus 146 a--G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 180 (196)
T 3gsl_A 146 D--GRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYD 180 (196)
T ss_dssp H--CCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCE
T ss_pred c--CCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCC
Confidence 7 5699999999999999999999999999987633
No 10
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.83 E-value=7.7e-20 Score=172.26 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=129.5
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCC--CCHHHHHHHHhcCCCCc
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG--LPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~--~~~~~~~~~l~~~~~~~ 142 (518)
.|+|.|.. ++|||+|.++.......+++|..|.++|||+++|+|+.||+|++|||+++.+ +++.+++.+++..++ .
T Consensus 21 ~v~~~~~~-~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~-~ 98 (206)
T 3r0h_A 21 LIELKVEK-KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYE-K 98 (206)
T ss_dssp EEEEECTT-SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCS-S
T ss_pred EEEEEeCC-CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCC-C
Confidence 47888864 5599999954322222589999999999999999999999999999999999 999999999999885 3
Q ss_pred EEEEEEEeCCce----eEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccc
Q psy3479 143 VVKLTVVPCAPV----VEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVD 218 (518)
Q Consensus 143 ~v~l~v~~~~~~----~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~ 218 (518)
.|+|+|.|.... .++.+.+ .....+||++..+. .+++|..|. |+++|+.. |+
T Consensus 99 ~v~l~v~R~~~~~~~~~~v~l~~-~~~~~lG~~~~~~~--------------------~gv~V~~V~-~gs~A~~a--G~ 154 (206)
T 3r0h_A 99 AVTLTVFRADPPELEKFNVDLMK-KAGKELGLSLSPNE--------------------IGCTIADLI-QGQYPEID--SK 154 (206)
T ss_dssp EEEEEEECCSSCCEEEEEEEEEC-CTTCCCCEEEEECS--------------------SCEEEEEEC-TTSCHHHH--HH
T ss_pred ceEEEEEecccCCCcEEEEEEec-CCCCccCeEEEcCC--------------------ceEEEEEEC-CCChHHHc--CC
Confidence 499999987542 2344442 34457888876210 468999998 99999887 56
Q ss_pred eeeeceEEEEcccchhhhhHHHHHHHhhcccc
Q psy3479 219 LFISTEKIMVLNTDLKEIMMDHALRTISYIAD 250 (518)
Q Consensus 219 L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~ 250 (518)
|+.||.|++|||.++.+.++.+++..++....
T Consensus 155 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 186 (206)
T 3r0h_A 155 LQRGDIITKFNGDALEGLPFQVCYALFKGANG 186 (206)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999987633
No 11
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.81 E-value=5.5e-19 Score=165.13 Aligned_cols=168 Identities=20% Similarity=0.337 Sum_probs=135.8
Q ss_pred cceeEEEEccCCcceeEEEEecCCc--CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~--~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
+..+|+|.|.+.++|||++.++... ....+++|..|.|+|||+++|+|++||+|++|||+.+.++++.++..+|+...
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5567999999888899999975321 12567999999999999999999999999999999999999999999999986
Q ss_pred CCcEEEEEEEeCCc--------eeEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCC
Q psy3479 140 NQTVVKLTVVPCAP--------VVEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGET 211 (518)
Q Consensus 140 ~~~~v~l~v~~~~~--------~~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a 211 (518)
.+..|+|+|.|... ...+.+.+ .....+||.+....... + ..+++|..+. |+++|
T Consensus 86 ~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~-~~~~~lG~~~~~~~~~~----~-----------~~gv~V~~V~-~~s~A 148 (196)
T 1p1d_A 86 ITSKVTLEIEFDVAESVIPSSGTFHVKLPK-KHSVELGITISSPSSRK----P-----------GDPLVISDIK-KGSVA 148 (196)
T ss_dssp SSSEEEEEEEECSCSCCBCCSSCEEEEECC-CSSCCCCCEEECSCSSS----T-----------TCCCEEEECC-SSSHH
T ss_pred CCCeEEEEEEecCCCCCCCCCCcEEEEecC-CCCCCcCEEEECCCCCC----C-----------CCCEEEEEEC-CCCcH
Confidence 44689999988752 23344543 34456888886532110 0 1578999998 99999
Q ss_pred CCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcc
Q psy3479 212 QPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI 248 (518)
Q Consensus 212 ~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~ 248 (518)
+.. |+|+.||.|++|||..+.+.+++++.+.++..
T Consensus 149 ~~a--G~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 183 (196)
T 1p1d_A 149 HRT--GTLELGDKLLAIDNIRLDSCSMEDAVQILQQC 183 (196)
T ss_dssp HHT--SCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC
T ss_pred Hhc--CCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 887 45999999999999999998899999999876
No 12
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.80 E-value=5.8e-19 Score=165.51 Aligned_cols=162 Identities=25% Similarity=0.284 Sum_probs=131.6
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|+|.|..+++|||+|.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.+++|.+++.+++..++ .|
T Consensus 10 ~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~--~v 85 (200)
T 2qt5_A 10 VVELMKKEGTTLGLTVSGGID--KDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGE--RV 85 (200)
T ss_dssp EEEEECCTTCCCCEEEECCTT--SSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS--EE
T ss_pred EEEEEeCCCCCCCEEEecccC--CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--eE
Confidence 588888888889999986432 23468999999999999995599999999999999999999999999998874 89
Q ss_pred EEEEEeCCc------------eeEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCC
Q psy3479 145 KLTVVPCAP------------VVEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQ 212 (518)
Q Consensus 145 ~l~v~~~~~------------~~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~ 212 (518)
+|+|.|..+ ...+.+. .....+||.+.++..... +. ..+++|..+. ++++|+
T Consensus 86 ~l~v~R~~~~~~~~g~~~~~~~~~v~l~--~~~~~lG~~l~~g~~~~~---~~----------~~g~~V~~v~-~~s~A~ 149 (200)
T 2qt5_A 86 VLEVEYELPPVSIQGSSVMFRTVEVTLH--KEGNTFGFVIRGGAHDDR---NK----------SRPVVITCVR-PGGPAD 149 (200)
T ss_dssp EEEEEEECCCCCCCCSSEEEEEEEEEEE--CBTTBCSEEEEEECCSST---TT----------CEEEEEEEEC-TTSHHH
T ss_pred EEEEeccCCCcccCCCccceeEEEEEEe--cCCCCeEEEEECCCCCCc---cC----------CCCEEEEEEC-CCChHH
Confidence 999988543 2334444 345678999886543211 10 1688999998 999988
Q ss_pred CCCccceeeeceEEEEcccchhhhhHHHHHHHhhcc
Q psy3479 213 PSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI 248 (518)
Q Consensus 213 ~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~ 248 (518)
.. |.|+.||.|++|||..+.+++++++.+.++..
T Consensus 150 ~a--G~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 183 (200)
T 2qt5_A 150 RE--GTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 183 (200)
T ss_dssp HH--CCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred Hc--CCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 76 45999999999999999999999999999873
No 13
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.79 E-value=4.9e-18 Score=154.37 Aligned_cols=151 Identities=19% Similarity=0.300 Sum_probs=119.9
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC-
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK- 425 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~- 425 (518)
.+++|.|.|....+|||++... ..+++|..|.++|||+++| |+.||+|++|||+++.+++++.+..+++...+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~-----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~ 77 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI-----DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE 77 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEEeCCCCcEeEEEEeC-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC
Confidence 3578999997778999999852 2479999999999999999 99999999999999999877667777766544
Q ss_pred cCCeeEEEeeee-cccceeccCCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCH
Q psy3479 426 TMPTSMFRLLTG-QETPVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPL 504 (518)
Q Consensus 426 ~v~~~v~r~~~~-~~~~~~~~~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~ 504 (518)
.+.+.+.+ . ....+.+.......|||.+. .+ +|.+|.++|||+++| |++||+|++|||+++.++++
T Consensus 78 ~v~l~vr~---~~~~~~v~l~~~~~~~lG~~~~--------~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~ 144 (166)
T 1w9e_A 78 KITMTIRD---RPFERTITMHKDSTGHVGFIFK--------NG-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKD 144 (166)
T ss_dssp EEEEEEEC---CTTCEEEEEECCTTSCCSEEEE--------TT-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCH
T ss_pred EEEEEEEc---CCCcEEEEEecCCCCcEeEEEe--------CC-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCCh
Confidence 44444411 1 11122333234567899886 13 899999999999999 99999999999999999999
Q ss_pred HHHHHHhhhcCC
Q psy3479 505 STCQTYIKVNHH 516 (518)
Q Consensus 505 ~e~v~~lk~~~~ 516 (518)
.++.-.++.++.
T Consensus 145 ~~v~~~v~r~g~ 156 (166)
T 1w9e_A 145 SQIADILSTSGT 156 (166)
T ss_dssp HHHHHHHHHSCS
T ss_pred HHHHHHHhhCCC
Confidence 999888887764
No 14
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.75 E-value=5.5e-18 Score=136.77 Aligned_cols=83 Identities=23% Similarity=0.388 Sum_probs=74.8
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
++|+|.|.+ ++|||+|.++++ ..+||++|.+||+|+++|+|++||+|++|||+++.|++|.+++++||+++.+..
T Consensus 7 k~V~l~K~~-~~LG~tI~~~g~----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~ 81 (95)
T 3gge_A 7 KEVNVYKSE-DSLGLTITDNGV----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEEL 81 (95)
T ss_dssp EEEEEECCS-SCCCEEEECSSS----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCE
T ss_pred EEEEEEECC-CCceEEEEcCCC----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCE
Confidence 479999976 669999996544 358999999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEeC
Q psy3479 144 VKLTVVPC 151 (518)
Q Consensus 144 v~l~v~~~ 151 (518)
++|++++.
T Consensus 82 ~~L~lv~p 89 (95)
T 3gge_A 82 FTMKLIEP 89 (95)
T ss_dssp EEEEEEEE
T ss_pred EEEEEECc
Confidence 99988754
No 15
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.68 E-value=3.6e-16 Score=129.76 Aligned_cols=91 Identities=57% Similarity=0.972 Sum_probs=80.8
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
++|++.|.++++|||++.+.+.+...++++|..|.++|||+++|.|++||+|++|||+++.++++++++++|+..+.+..
T Consensus 11 ~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~ 90 (101)
T 2yt7_A 11 REVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTS 90 (101)
T ss_dssp EEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSE
T ss_pred EEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 36889998888899999976655556789999999999999988899999999999999999999999999999644469
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|+|+|.|++|+
T Consensus 91 v~l~v~R~~p~ 101 (101)
T 2yt7_A 91 VTLSIVHCPPV 101 (101)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEEEeCCCC
Confidence 99999999985
No 16
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.67 E-value=1.6e-15 Score=137.66 Aligned_cols=151 Identities=15% Similarity=0.242 Sum_probs=121.8
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
+.+.|.|.|...+.|||.+.... .+++|..|.|+|||+++| |++||+|++|||+.+.+++++.+..+++....
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~-----~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~- 76 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID-----NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFG- 76 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET-----TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC-----CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-
Confidence 44679999987777999998643 479999999999999999 99999999999999999999888899987763
Q ss_pred cEEEEEEEeCCceeEEEeeCCCCccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceee
Q psy3479 142 TVVKLTVVPCAPVVEVKIKRPDTKYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFI 221 (518)
Q Consensus 142 ~~v~l~v~~~~~~~~~~~~rp~~~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~ 221 (518)
..|+|+|.+.+...++.+.+ +....+||.+.. + +|..+. |+++|+.. +|+.
T Consensus 77 ~~v~l~vr~~~~~~~v~l~~-~~~~~lG~~~~~-----------------------g-~v~~v~-~~s~a~~a---Gl~~ 127 (166)
T 1w9e_A 77 EKITMTIRDRPFERTITMHK-DSTGHVGFIFKN-----------------------G-KITSIV-KDSSAARN---GLLT 127 (166)
T ss_dssp SEEEEEEECCTTCEEEEEEC-CTTSCCSEEEET-----------------------T-EEEEEC-TTSHHHHT---TCCS
T ss_pred CEEEEEEEcCCCcEEEEEec-CCCCcEeEEEeC-----------------------C-EEEEEc-cCCHHHHc---CCCC
Confidence 58999996654556666663 334556766541 2 667787 88988876 5999
Q ss_pred eceEEEEcccchhhhhHHHHHHHhhcc
Q psy3479 222 STEKIMVLNTDLKEIMMDHALRTISYI 248 (518)
Q Consensus 222 gD~il~Vng~~~~~~~~~eav~~lk~~ 248 (518)
||.|++|||..+.+..++++.-.++..
T Consensus 128 GD~I~~ing~~v~~~~~~~v~~~v~r~ 154 (166)
T 1w9e_A 128 EHNICEINGQNVIGLKDSQIADILSTS 154 (166)
T ss_dssp SEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCEEEEECCEECCCCChHHHHHHHhhC
Confidence 999999999999999888776655443
No 17
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.66 E-value=4.4e-16 Score=123.19 Aligned_cols=77 Identities=27% Similarity=0.443 Sum_probs=68.8
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
++.|+|.|++.++|||++.+ + +|..+.++|||+++| |++||+|++|||+++.+++|++++++||+++ .
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~~-g--------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g--~ 72 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFKN-G--------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG--T 72 (82)
T ss_dssp CEEEEEECCTTSCCCEEEET-T--------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC--S
T ss_pred eEEEEEEECCCCCeEEEEEC-C--------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCC--C
Confidence 35699999998889999973 1 378999999999999 9999999999999999999999999999877 4
Q ss_pred EEEEEEEeC
Q psy3479 143 VVKLTVVPC 151 (518)
Q Consensus 143 ~v~l~v~~~ 151 (518)
.|+|+|.+.
T Consensus 73 ~V~L~v~p~ 81 (82)
T 1r6j_A 73 VVTITIMPA 81 (82)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 899999753
No 18
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.60 E-value=5.3e-15 Score=139.35 Aligned_cols=134 Identities=19% Similarity=0.173 Sum_probs=93.7
Q ss_pred CcEEEEEecCCChhhhcCCCCCC-CEEEEEcCeeccCCChHHHHHHHHH-hcCcCCeeEEEeeeecccceeccC----CC
Q psy3479 375 PTVVIANLAPAGAAARCGQLNIG-DQIIAVNGVSLVGLPLSTCQTYIKI-LMKTMPTSMFRLLTGQETPVVVPK----AK 448 (518)
Q Consensus 375 ~g~~I~~V~~~s~A~~~G~l~~G-D~Il~Vng~~v~~~s~~~~~~~l~~-~~~~v~~~v~r~~~~~~~~~~~~~----~~ 448 (518)
.|++|..|.++|||+++| |+.| |+|++|||+.+.++..... .++.. .+..+.+.+.|-.......+.+.. ..
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~ 93 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGG 93 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSS
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecCCceEEEEEEcccccccc
Confidence 389999999999999999 9999 9999999999997654332 33333 345555555442111111122211 12
Q ss_pred CccccEEEEecCCC-CCCCcEEEEEECCCChhhhcCCCCC-CCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 449 GEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNI-GDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 449 ~~~lG~~i~~~g~~-~~~~~i~I~~V~~gs~A~~aG~L~~-GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
...||+.+...... ....+++|.+|.++|||+++| |++ ||+|++|||. +.+ ++++.++|++.
T Consensus 94 ~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~ 157 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETH 157 (209)
T ss_dssp SSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHT
T ss_pred cCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhC
Confidence 35789988632111 112578999999999999999 999 9999999998 754 47788888764
No 19
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.58 E-value=5.3e-15 Score=124.23 Aligned_cols=90 Identities=21% Similarity=0.267 Sum_probs=76.5
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--C
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS--K 139 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~--~ 139 (518)
+...|.|.|.++++|||+|.++.......+++|.+|.++|||+++|+|++||+|++|||+++.+++|++++++|+++ .
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 34568899877777999999754322357899999999999999999999999999999999999999999999988 3
Q ss_pred CCcEEEEEEEeCC
Q psy3479 140 NQTVVKLTVVPCA 152 (518)
Q Consensus 140 ~~~~v~l~v~~~~ 152 (518)
. ..|+|+|.|+.
T Consensus 85 ~-~~v~l~v~R~~ 96 (108)
T 3cbz_A 85 P-GPIVLTVAKSG 96 (108)
T ss_dssp S-SCEEEEEECCC
T ss_pred C-CeEEEEEEeCC
Confidence 2 36999988763
No 20
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.57 E-value=1.1e-14 Score=124.18 Aligned_cols=89 Identities=21% Similarity=0.381 Sum_probs=76.8
Q ss_pred ceeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
.+.|.|.|.++++|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+++++
T Consensus 25 ~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~- 103 (118)
T 3b76_A 25 EKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSS- 103 (118)
T ss_dssp EEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCS-
T ss_pred cEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-
Confidence 346888998878899999965321 124579999999999999999999999999999999999999999999999874
Q ss_pred cEEEEEEEeCCc
Q psy3479 142 TVVKLTVVPCAP 153 (518)
Q Consensus 142 ~~v~l~v~~~~~ 153 (518)
.|+|+|.|..+
T Consensus 104 -~v~L~v~R~~~ 114 (118)
T 3b76_A 104 -SIVLKALEVKE 114 (118)
T ss_dssp -EEEEEEEEEEE
T ss_pred -eEEEEEEECCC
Confidence 89999987653
No 21
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.55 E-value=3.7e-14 Score=115.37 Aligned_cols=86 Identities=27% Similarity=0.322 Sum_probs=75.7
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
+...|+|.|.++++|||++.+... ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..++
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~- 79 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN---DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLG- 79 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS---SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-
T ss_pred eEEEEEEEeCCCCcccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-
Confidence 445699999888889999986432 4689999999999999999999999999999999999999999999998774
Q ss_pred cEEEEEEEeCC
Q psy3479 142 TVVKLTVVPCA 152 (518)
Q Consensus 142 ~~v~l~v~~~~ 152 (518)
.|+|+|.|..
T Consensus 80 -~v~l~v~R~~ 89 (92)
T 2qg1_A 80 -TVTLEVGRIS 89 (92)
T ss_dssp -EEEEEEECCC
T ss_pred -eEEEEEEccc
Confidence 7999998764
No 22
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.54 E-value=5.2e-14 Score=115.20 Aligned_cols=86 Identities=31% Similarity=0.363 Sum_probs=75.0
Q ss_pred cceeEEEEcc-CCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 62 ESDEVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 62 ~s~~v~l~k~-~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
+..+|.|.|. ++++|||++.+... .++++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g- 78 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD---EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG- 78 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS---SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-
T ss_pred EEEEEEEEECCCCCcccEEEEeccC---CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 3446999986 56789999986443 568999999999999999999999999999999999999999999999876
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 79 -~~v~l~v~R~~ 89 (95)
T 2vwr_A 79 -ERVNLTIARPG 89 (95)
T ss_dssp -SEEEEEEEEES
T ss_pred -CEEEEEEEcCC
Confidence 48999998753
No 23
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=2.7e-14 Score=115.23 Aligned_cols=82 Identities=23% Similarity=0.461 Sum_probs=72.1
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|+|.|.++++|||++...+ ..+++|..|.++|||++++.|++||+|++|||+++.++++++++++|++.+. .
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~----~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~--~ 76 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNE----LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG--S 76 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSC----GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE--E
T ss_pred EEEEEEeCCCCceeEEEEeCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC--c
Confidence 358899998888999998643 2368999999999999966699999999999999999999999999999984 8
Q ss_pred EEEEEEeC
Q psy3479 144 VKLTVVPC 151 (518)
Q Consensus 144 v~l~v~~~ 151 (518)
|+|+|.|.
T Consensus 77 v~l~v~r~ 84 (88)
T 1kwa_A 77 ITFKIVPS 84 (88)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 88888764
No 24
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.53 E-value=3.5e-14 Score=119.35 Aligned_cols=85 Identities=24% Similarity=0.405 Sum_probs=71.6
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC--CCc
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK--NQT 142 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~--~~~ 142 (518)
.|++.|. .+|||+|.++......++++|..|.++|||+++|+|++||+|++|||+++.+++|++++++||+++ .+.
T Consensus 18 ~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~ 95 (109)
T 1wi4_A 18 VITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSES 95 (109)
T ss_dssp EEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSS
T ss_pred EEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCc
Confidence 5777775 569999997543223457999999999999999999999999999999999999999999999988 335
Q ss_pred EEEEEEEeC
Q psy3479 143 VVKLTVVPC 151 (518)
Q Consensus 143 ~v~l~v~~~ 151 (518)
.++|.+.|.
T Consensus 96 ~~~l~v~R~ 104 (109)
T 1wi4_A 96 PWEIAFIRS 104 (109)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEEeC
Confidence 777777664
No 25
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.53 E-value=4.1e-14 Score=118.74 Aligned_cols=88 Identities=25% Similarity=0.293 Sum_probs=74.8
Q ss_pred eeEEEEccCCcceeEEEEecCC--cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 64 DEVVVPKAKGEILGVVIVESGW--GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~--~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
+.|.|.|.+. +|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|+.++.
T Consensus 17 ~~v~l~k~~~-glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~- 94 (108)
T 2d92_A 17 KIVELVKDCK-GLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPP- 94 (108)
T ss_dssp EEEEEEECSS-CCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCS-
T ss_pred EEEEEEECCC-ccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-
Confidence 4699999865 59999986322 0124689999999999999999999999999999999999999999999999764
Q ss_pred cEEEEEEEeCCc
Q psy3479 142 TVVKLTVVPCAP 153 (518)
Q Consensus 142 ~~v~l~v~~~~~ 153 (518)
..|+|+|.|.+.
T Consensus 95 ~~v~l~v~R~~~ 106 (108)
T 2d92_A 95 GLVHLGICSGPS 106 (108)
T ss_dssp EEEEEEEECCCC
T ss_pred CeEEEEEEcCCC
Confidence 489999987653
No 26
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.52 E-value=3.6e-14 Score=114.91 Aligned_cols=88 Identities=23% Similarity=0.364 Sum_probs=75.1
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
|+..+|.|.|...+ |||++.++.. . ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|++++.
T Consensus 1 ~~~~~v~l~~~~~g-~G~~~~~g~~-~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 1 SMEQDIFLWRKETG-FGFRILGGNE-P-GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp CEEEEEEEECBTTB-CCEEEEECSS-T-TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEEEECCCc-cCEEEEcccc-C-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 35567999998765 9999986432 1 2359999999999999999999999999999999999999999999999864
Q ss_pred CcEEEEEEEeC
Q psy3479 141 QTVVKLTVVPC 151 (518)
Q Consensus 141 ~~~v~l~v~~~ 151 (518)
+..|+|+|.|.
T Consensus 78 ~~~v~l~v~R~ 88 (90)
T 2q9v_A 78 QGHVNLTVRQT 88 (90)
T ss_dssp HTEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 34899999774
No 27
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.52 E-value=1.1e-13 Score=110.82 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=72.9
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
|.+|+|.|...+ |||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++.++|+..+.+.
T Consensus 1 s~~v~l~k~~~g-~G~~i~~~~~--~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 77 (85)
T 2i04_A 1 SIHTKLRKSSRG-FGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 77 (85)
T ss_dssp CEEEEEECBTTB-SSEEEEECCS--TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTC
T ss_pred CEEEEEEECCCC-CCEEEEcccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 346888887765 9999986443 2457999999999999999999999999999999999999999999999985445
Q ss_pred EEEEEEEe
Q psy3479 143 VVKLTVVP 150 (518)
Q Consensus 143 ~v~l~v~~ 150 (518)
.|+|+|.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 89998864
No 28
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.52 E-value=5.2e-14 Score=115.41 Aligned_cols=81 Identities=23% Similarity=0.447 Sum_probs=73.2
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|.++++|||++.... ..+++|..|.|+|||+++|+|++||+|++|||+++.++++++++++|++.+ ..|
T Consensus 15 ~v~l~K~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~--~~v 88 (97)
T 2ejy_A 15 LIQFEKVTEEPMGICLKLNE----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK--GMI 88 (97)
T ss_dssp EEEEEECSSSCCSEEEEECT----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC--EEE
T ss_pred EEEEEeCCCCCeeEEEEeCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeE
Confidence 68999999999999998533 247999999999999999999999999999999999999999999999876 489
Q ss_pred EEEEEeC
Q psy3479 145 KLTVVPC 151 (518)
Q Consensus 145 ~l~v~~~ 151 (518)
+|+|.+.
T Consensus 89 ~L~V~~~ 95 (97)
T 2ejy_A 89 SLKVIPN 95 (97)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9998764
No 29
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.52 E-value=5.6e-14 Score=122.02 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=74.4
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcC-CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~-~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
.+.++|+|.|..+ +|||+|.++.... ...+++|..|.++|||+++|.|++||+|++|||+++.+++|++++++||.++
T Consensus 28 ~~~~~v~l~k~~~-glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 28 ATVCTVTLEKMSA-GLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp EEEEEEEEETTSS-STTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CcEEEEEEEcCCC-ccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3444689998754 5999999643200 2346999999999999999669999999999999999999999999999997
Q ss_pred CCcEEEEEEEeCC
Q psy3479 140 NQTVVKLTVVPCA 152 (518)
Q Consensus 140 ~~~~v~l~v~~~~ 152 (518)
+ ..|.|+|.|..
T Consensus 107 ~-~~v~l~v~r~~ 118 (130)
T 1i16_A 107 D-GPVTIVIRRKS 118 (130)
T ss_dssp S-SEEEEEEEEES
T ss_pred C-ceEEEEEEeCC
Confidence 5 57899988754
No 30
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.52 E-value=3.5e-14 Score=118.69 Aligned_cols=85 Identities=28% Similarity=0.371 Sum_probs=75.3
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
+..+|.|.|..+.+|||++.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++..++
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~- 75 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANG- 75 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEEC-----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBS-
T ss_pred eEEEEEEEeCCCCccCEEEEeC-----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC-
Confidence 4456999988888899999862 3479999999999999999999999999999999999999999999999874
Q ss_pred cEEEEEEEeCCc
Q psy3479 142 TVVKLTVVPCAP 153 (518)
Q Consensus 142 ~~v~l~v~~~~~ 153 (518)
.|.|+|.|..+
T Consensus 76 -~v~l~v~R~~~ 86 (106)
T 2la8_A 76 -KVSMEVTRPKP 86 (106)
T ss_dssp -CEEEEEEECCS
T ss_pred -eEEEEEEeCCC
Confidence 69999988654
No 31
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.52 E-value=5.8e-14 Score=116.76 Aligned_cols=88 Identities=30% Similarity=0.425 Sum_probs=75.2
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
...|+|.|..+++|||+|.++.. ...+++|..|.++|||++++.|++||+|++|||+++.++++.+++.+|+++++
T Consensus 10 ~~~v~l~~~~~~~lG~~l~~g~~--~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~-- 85 (103)
T 2dc2_A 10 IRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG-- 85 (103)
T ss_dssp EEEEEEECCSSSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCS--
T ss_pred cEEEEEEeCCCCccCEEEEeccC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--
Confidence 35689999888889999996432 13478999999999999974499999999999999999999999999999985
Q ss_pred EEEEEEEeCCce
Q psy3479 143 VVKLTVVPCAPV 154 (518)
Q Consensus 143 ~v~l~v~~~~~~ 154 (518)
.|+|+|.+..+.
T Consensus 86 ~v~l~v~~~~~~ 97 (103)
T 2dc2_A 86 EIEFEVVYVALE 97 (103)
T ss_dssp EEEEEEEECC--
T ss_pred cEEEEEEecCCc
Confidence 899999987643
No 32
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.51 E-value=2.5e-14 Score=122.36 Aligned_cols=91 Identities=24% Similarity=0.361 Sum_probs=72.4
Q ss_pred ccceeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
.+.+.|+|.|.++++|||+|.++... ....+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+|+.++
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34457999999887799999964310 01347999999999999999669999999999999999999999999999998
Q ss_pred CCcEEEEEEEeCCc
Q psy3479 140 NQTVVKLTVVPCAP 153 (518)
Q Consensus 140 ~~~~v~l~v~~~~~ 153 (518)
+ .|+|+|.|...
T Consensus 103 ~--~v~l~v~r~g~ 114 (120)
T 2iwo_A 103 G--SIEMQVVAGGD 114 (120)
T ss_dssp S--EEEEEEECCTT
T ss_pred C--eEEEEEEECCc
Confidence 5 79999987643
No 33
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.51 E-value=9.1e-14 Score=114.01 Aligned_cols=88 Identities=26% Similarity=0.320 Sum_probs=77.0
Q ss_pred cccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 60 VFESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 60 vf~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
-|+..++.|.|..+.+|||++... ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN-----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC-----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred HCceEEEEEEeCCCCCccEEEEeC-----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 455567999888888899999862 347999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEEeCCce
Q psy3479 140 NQTVVKLTVVPCAPV 154 (518)
Q Consensus 140 ~~~~v~l~v~~~~~~ 154 (518)
. .|.|+|.|..|.
T Consensus 81 ~--~v~l~v~R~~p~ 93 (96)
T 2qkv_A 81 G--KVSMEVTRPKPA 93 (96)
T ss_dssp S--EEEEEEECCCC-
T ss_pred C--cEEEEEEeCCcc
Confidence 4 799999987653
No 34
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.51 E-value=1.3e-13 Score=114.44 Aligned_cols=90 Identities=29% Similarity=0.404 Sum_probs=76.5
Q ss_pred ccceeEEEEccCCcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
|+.++|.|.|..+ +|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 3 ~~~~~v~l~k~~~-glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 3 FKYEEIVLERGNS-GLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEEEECBTT-BTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCC-cCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5556799999755 599999964321 124689999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeCCc
Q psy3479 138 SKNQTVVKLTVVPCAP 153 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~~ 153 (518)
.+ ..|.|+|.|...
T Consensus 82 ~g--~~v~l~v~R~~~ 95 (102)
T 2i1n_A 82 AG--PVVRLVVRRRQP 95 (102)
T ss_dssp SC--SEEEEEEEEECC
T ss_pred CC--CeEEEEEEeCCC
Confidence 76 489999988653
No 35
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.51 E-value=3.4e-14 Score=123.56 Aligned_cols=88 Identities=27% Similarity=0.379 Sum_probs=74.3
Q ss_pred EEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 66 VVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+.+.|..+++|||+|.++... ....++||..|.++|||+++|+|++||+|++|||+++.+++|++++++|+.++.+..|
T Consensus 40 ~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v 119 (131)
T 1wfg_A 40 GSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQV 119 (131)
T ss_dssp SCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEE
T ss_pred EEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 555566788899999864321 2245899999999999999999999999999999999999999999999998645689
Q ss_pred EEEEEeCCc
Q psy3479 145 KLTVVPCAP 153 (518)
Q Consensus 145 ~l~v~~~~~ 153 (518)
+|+|.|..+
T Consensus 120 ~l~v~R~g~ 128 (131)
T 1wfg_A 120 ELVVSRSGP 128 (131)
T ss_dssp EEEEEEECS
T ss_pred EEEEEcCCC
Confidence 999987644
No 36
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.50 E-value=1.3e-13 Score=112.38 Aligned_cols=82 Identities=22% Similarity=0.426 Sum_probs=72.0
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|+|.|.. ++|||++.+.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|+++++ .|
T Consensus 7 ~v~l~k~~-~~lG~~i~~~~---~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~--~v 80 (93)
T 3o46_A 7 IIRLVKNR-EPLGATIKKDE---QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG--AI 80 (93)
T ss_dssp EEEEEESS-SCCCEEEEECT---TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE--EE
T ss_pred EEEEEeCC-CCccEEEEecC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--eE
Confidence 58888874 57999998652 24579999999999999999999999999999999999999999999999884 89
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.+..
T Consensus 81 ~l~v~~~~ 88 (93)
T 3o46_A 81 TFKIIPGS 88 (93)
T ss_dssp EEEEECC-
T ss_pred EEEEEeCC
Confidence 99998653
No 37
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.50 E-value=1.4e-13 Score=143.87 Aligned_cols=151 Identities=17% Similarity=0.205 Sum_probs=103.4
Q ss_pred CceeEEEEeC------CCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCcCCe
Q psy3479 359 EILGVVIVES------GWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKTMPT 429 (518)
Q Consensus 359 ~~lG~~i~~~------~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~v~~ 429 (518)
.+||+.+..- .++.. ..|++|..|.++|||+++| |+.||+|++|||+.+. ++.+....+.. .+..+.+
T Consensus 240 ~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l 316 (436)
T 4a8c_A 240 GLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKL 316 (436)
T ss_pred ccCceEecccCHHHHHHhCCCCCcceEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEE
Confidence 4788887641 12222 2489999999999999999 9999999999999999 45666666654 3455556
Q ss_pred eEEEeeeecccceeccCCC-------CccccEEEEecC---CCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy3479 430 SMFRLLTGQETPVVVPKAK-------GEILGVVIVESG---WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 499 (518)
Q Consensus 430 ~v~r~~~~~~~~~~~~~~~-------~~~lG~~i~~~g---~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v 499 (518)
.+.|-.......+.+...+ ...+|+...... ......+++|.+|.++|||+++| |++||+|++|||+++
T Consensus 317 ~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 395 (436)
T 4a8c_A 317 GLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRV 395 (436)
T ss_pred EEEECCEEEEEEEEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 6555222111111111111 112455443211 00112478999999999999999 999999999999999
Q ss_pred CCCCHHHHHHHhhhcC
Q psy3479 500 VGLPLSTCQTYIKVNH 515 (518)
Q Consensus 500 ~~~s~~e~v~~lk~~~ 515 (518)
. +++++.++|++.+
T Consensus 396 ~--~~~~~~~~l~~~~ 409 (436)
T 4a8c_A 396 N--SIAEMRKVLAAKP 409 (436)
T ss_pred C--CHHHHHHHHHhCC
Confidence 6 4699999998754
No 38
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=5e-14 Score=117.09 Aligned_cols=86 Identities=27% Similarity=0.414 Sum_probs=70.2
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC---CC
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK---NQ 141 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~---~~ 141 (518)
.|.|.|.. .+|||+|.++.. ...|.++|..|.++|||+++|+|++||+|++|||+++.+++|++++++|+.+. ..
T Consensus 9 ~v~l~k~~-~glG~~i~gg~~-~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~ 86 (103)
T 1ufx_A 9 LVRVKKSA-ATLGIAIEGGAN-TRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDR 86 (103)
T ss_dssp EEEEECCS-SSCCEEEECBTT-SSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSC
T ss_pred EEEEEcCC-CcCCeEEECCCC-CCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCC
Confidence 47776654 559999996443 33466799999999999999999999999999999999999999999999851 12
Q ss_pred cEEEEEEEeCC
Q psy3479 142 TVVKLTVVPCA 152 (518)
Q Consensus 142 ~~v~l~v~~~~ 152 (518)
..++|+|.|..
T Consensus 87 ~~i~l~v~r~~ 97 (103)
T 1ufx_A 87 DYIDFLVTEFN 97 (103)
T ss_dssp SEEEEEECCCC
T ss_pred CeEEEEEEEcc
Confidence 47788777653
No 39
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=9.1e-14 Score=118.40 Aligned_cols=91 Identities=24% Similarity=0.297 Sum_probs=76.3
Q ss_pred ccceeEEEEccC------CcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 61 FESDEVVVPKAK------GEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 61 f~s~~v~l~k~~------~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
|...+|.|.|.. +.+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.+++|.++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 444578898887 56799999864421 123479999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEeCCc
Q psy3479 132 QTYIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~~~~ 153 (518)
+.+|+..+ ..|+|+|.|...
T Consensus 91 ~~~l~~~~--~~v~l~v~R~~~ 110 (117)
T 1ujd_A 91 QSIISQQS--GEAEICVRLDLN 110 (117)
T ss_dssp HHHHSCCS--SCEEEEEESSCC
T ss_pred HHHHhcCC--CEEEEEEEECCc
Confidence 99999976 479999987653
No 40
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.50 E-value=1.6e-13 Score=118.38 Aligned_cols=87 Identities=23% Similarity=0.283 Sum_probs=77.3
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
+...+|+|.|...++|||++.++.. ..++++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++.++
T Consensus 18 ~~~~~v~l~k~~~~~lG~~i~gg~~--~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 95 (125)
T 3hpk_A 18 TVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 95 (125)
T ss_dssp EEEEEEEEECCTTSCCCEEEEECSS--CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CCCeEEEEEeCCCCCcCEEEeccCC--CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4566799999988889999997543 24679999999999999999999999999999999999999999999999885
Q ss_pred CcEEEEEEEeC
Q psy3479 141 QTVVKLTVVPC 151 (518)
Q Consensus 141 ~~~v~l~v~~~ 151 (518)
.|+|+|.|.
T Consensus 96 --~v~l~v~r~ 104 (125)
T 3hpk_A 96 --EVTIHYNKL 104 (125)
T ss_dssp --EEEEEEEEE
T ss_pred --eEEEEEEEC
Confidence 699998774
No 41
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.49 E-value=1.2e-13 Score=125.26 Aligned_cols=84 Identities=27% Similarity=0.430 Sum_probs=73.2
Q ss_pred eeEEEEccCCcceeEEEEecCCcC----CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~----~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
..|+|.|..+ +|||+|.+.+.+. ...+++|..|.+||||+++|+|++||+|++|||+++.+++|.+++.+|++++
T Consensus 82 ~~v~l~k~~~-glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g 160 (170)
T 3egg_C 82 FPVELEKDSE-GLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 160 (170)
T ss_dssp EEEEEECBTT-BSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCC
T ss_pred EEEEEEeCCC-eEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3588888875 5999999743322 2468999999999999999999999999999999999999999999999987
Q ss_pred CCcEEEEEEEe
Q psy3479 140 NQTVVKLTVVP 150 (518)
Q Consensus 140 ~~~~v~l~v~~ 150 (518)
..|+|+|.|
T Consensus 161 --~~v~L~V~R 169 (170)
T 3egg_C 161 --GRVRFMIGR 169 (170)
T ss_dssp --SEEEEEEEE
T ss_pred --CEEEEEEEe
Confidence 499999987
No 42
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.49 E-value=1.4e-13 Score=144.29 Aligned_cols=151 Identities=19% Similarity=0.250 Sum_probs=104.5
Q ss_pred CceeEEEEeC------CCCCcC--CcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCcCC
Q psy3479 359 EILGVVIVES------GWGSML--PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKTMP 428 (518)
Q Consensus 359 ~~lG~~i~~~------~~g~~~--~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~v~ 428 (518)
.+||+.+..- .+|... .|++|..|.++|||+++| |+.||+|++|||+.+. ++.+....+.. .+..+.
T Consensus 258 ~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~ 334 (451)
T 3pv2_A 258 GLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQINDTKIT--QATQVKTTISLLRVGSTVK 334 (451)
T ss_dssp CBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEE
T ss_pred ccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEE
Confidence 5789988751 122222 589999999999999999 9999999999999998 56777777764 345555
Q ss_pred eeEEEeeeecccceeccCC----------CCccccEEEEecCCCC----CCCcEEEEEECCCChhhhcCCCCCCCEEEEE
Q psy3479 429 TSMFRLLTGQETPVVVPKA----------KGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAV 494 (518)
Q Consensus 429 ~~v~r~~~~~~~~~~~~~~----------~~~~lG~~i~~~g~~~----~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~V 494 (518)
+.+.|-.......+.+... ....+|+.+....... ...|++|.+|.++|||+++| |++||+|++|
T Consensus 335 l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~V 413 (451)
T 3pv2_A 335 IIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISA 413 (451)
T ss_dssp EEEEETTEEEEEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEE
T ss_pred EEEEECCEEEEEEEEEccCCccccccccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEE
Confidence 5555421111111111111 0123455554211000 11378999999999999999 9999999999
Q ss_pred CCEeCCCCCHHHHHHHhhhcC
Q psy3479 495 NGVSLVGLPLSTCQTYIKVNH 515 (518)
Q Consensus 495 Ng~~v~~~s~~e~v~~lk~~~ 515 (518)
||+++.+ ++++.++|++.+
T Consensus 414 ng~~v~~--~~~~~~~l~~~~ 432 (451)
T 3pv2_A 414 NKKPVTD--VKSLQTIAQEKK 432 (451)
T ss_dssp TTEECCS--HHHHHHHTTSSC
T ss_pred CCEECCC--HHHHHHHHhcCC
Confidence 9999965 599999998754
No 43
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.49 E-value=2e-13 Score=116.17 Aligned_cols=87 Identities=25% Similarity=0.296 Sum_probs=74.1
Q ss_pred cceeEEEEccCCcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS 138 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~ 138 (518)
+..+|+|.|.. .+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+++
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 33468888887 5699999964321 1245899999999999999999999999999999999999999999999988
Q ss_pred CCCcEEEEEEEeC
Q psy3479 139 KNQTVVKLTVVPC 151 (518)
Q Consensus 139 ~~~~~v~l~v~~~ 151 (518)
+ ..|+|+|.|.
T Consensus 103 g--~~v~l~v~R~ 113 (117)
T 2byg_A 103 S--EVVYLKVGKP 113 (117)
T ss_dssp C--SEEEEEEEEE
T ss_pred C--CeEEEEEEeC
Confidence 6 4899999875
No 44
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.49 E-value=1.6e-13 Score=111.07 Aligned_cols=85 Identities=26% Similarity=0.251 Sum_probs=73.6
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
...|+|.|..+++|||++.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..++
T Consensus 5 ~~~v~l~k~~~~~lG~~i~~~~~--~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~-- 80 (90)
T 1qav_A 5 RRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGK-- 80 (90)
T ss_dssp CEEEEEECCTTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCS--
T ss_pred cEEEEEEeCCCCCcCEEEEcccC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--
Confidence 34689999888889999986432 13579999999999999995599999999999999999999999999999874
Q ss_pred EEEEEEEeC
Q psy3479 143 VVKLTVVPC 151 (518)
Q Consensus 143 ~v~l~v~~~ 151 (518)
.|+|+|.|.
T Consensus 81 ~v~l~v~r~ 89 (90)
T 1qav_A 81 EVVLEVKYM 89 (90)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEe
Confidence 799998875
No 45
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.49 E-value=1.1e-13 Score=117.94 Aligned_cols=87 Identities=23% Similarity=0.422 Sum_probs=75.5
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
..|.|.|..+++|||++.+... ....+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|++.+ ..
T Consensus 17 ~~v~l~k~~~~~lG~~i~~~~~-~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g--~~ 93 (117)
T 1v62_A 17 LMVEIVKTPGSALGISLTTTSL-RNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASIS--EK 93 (117)
T ss_dssp EEEEEECCTTCCCCCEEEEECC-SSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCS--SE
T ss_pred EEEEEEcCCCCcccEEEEccCC-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--Ce
Confidence 4599999998789999986432 22345999999999999999999999999999999999999999999999766 59
Q ss_pred EEEEEEeCCc
Q psy3479 144 VKLTVVPCAP 153 (518)
Q Consensus 144 v~l~v~~~~~ 153 (518)
|+|+|.|...
T Consensus 94 v~l~v~r~~~ 103 (117)
T 1v62_A 94 VRLEILPVPQ 103 (117)
T ss_dssp EEEEECCBTT
T ss_pred EEEEEEECCC
Confidence 9999987653
No 46
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.48 E-value=3.1e-13 Score=110.28 Aligned_cols=87 Identities=28% Similarity=0.329 Sum_probs=73.5
Q ss_pred cceeEEEEccCCcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS 138 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~ 138 (518)
+-.+|+|.|...+ |||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 3 ~~~~v~l~k~~~g-~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 3 TIMEVNLLKGPKG-LGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CEEEEEEECCTTC-SCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred EEEEEEEEECCCC-CCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456999998655 99999964321 1234899999999999999999999999999999999999999999999988
Q ss_pred CCCcEEEEEEEeC
Q psy3479 139 KNQTVVKLTVVPC 151 (518)
Q Consensus 139 ~~~~~v~l~v~~~ 151 (518)
++ .|+|+|.|.
T Consensus 82 ~~--~v~l~v~R~ 92 (94)
T 2fe5_A 82 SD--MVYLKVAKP 92 (94)
T ss_dssp CS--EEEEEEECC
T ss_pred CC--eEEEEEEcC
Confidence 74 899988764
No 47
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.48 E-value=1.8e-13 Score=110.05 Aligned_cols=83 Identities=30% Similarity=0.464 Sum_probs=71.5
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
..|.|.|.++++|||++.++.. ...+++|..|.|+|||++++.|++||+|++|||+++.++++.+++.+|+++++ .
T Consensus 4 ~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~ 79 (87)
T 4e34_A 4 RKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG--E 79 (87)
T ss_dssp EEEEEECCTTBCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCS--E
T ss_pred EEEEEEECCCCcccEEEEccCC--CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--e
Confidence 4689999988889999986532 13469999999999999953399999999999999999999999999998874 7
Q ss_pred EEEEEEe
Q psy3479 144 VKLTVVP 150 (518)
Q Consensus 144 v~l~v~~ 150 (518)
++|+|.+
T Consensus 80 v~l~v~~ 86 (87)
T 4e34_A 80 IEFEVVY 86 (87)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888864
No 48
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.48 E-value=9.3e-14 Score=120.32 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=76.0
Q ss_pred eEEEEccCCcceeEEEEecCC-cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCCCc
Q psy3479 65 EVVVPKAKGEILGVVIVESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-GLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~-~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~-~~~~~~~~~~l~~~~~~~ 142 (518)
.|.|.|..+++|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||+++. ++++.+++.+|+..+ .
T Consensus 28 ~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~--~ 105 (128)
T 2db5_A 28 YIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTT--G 105 (128)
T ss_dssp EEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCC--S
T ss_pred EEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC--C
Confidence 589999887779999986432 112348999999999999999999999999999999997 999999999999976 4
Q ss_pred EEEEEEEeCCce
Q psy3479 143 VVKLTVVPCAPV 154 (518)
Q Consensus 143 ~v~l~v~~~~~~ 154 (518)
.|+|+|.|.++.
T Consensus 106 ~v~l~v~r~~~~ 117 (128)
T 2db5_A 106 SLRLIVAREPVH 117 (128)
T ss_dssp EEEEEEEECCCS
T ss_pred eEEEEEEcCCCC
Confidence 899999987654
No 49
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.48 E-value=4.3e-13 Score=108.76 Aligned_cols=83 Identities=22% Similarity=0.257 Sum_probs=71.0
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
|+++.|+|.|.+++ |||++.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|++.+.
T Consensus 2 ~~~r~v~l~r~~~g-~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 76 (91)
T 1g9o_A 2 MLPRLCCLEKGPNG-YGFHLHGEKG---KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALN 76 (91)
T ss_dssp CCCEEEEEECBTTB-CCEEEEECTT---CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred CccEEEEEEeCCCc-ccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45677999998875 9999986553 4689999999999999999 99999999999999999999999999999874
Q ss_pred CcEEEEEEEe
Q psy3479 141 QTVVKLTVVP 150 (518)
Q Consensus 141 ~~~v~l~v~~ 150 (518)
.+.+.+.+
T Consensus 77 --~~~~~~~~ 84 (91)
T 1g9o_A 77 --AVRLLVVD 84 (91)
T ss_dssp --EEEEEEEC
T ss_pred --cEEEEEEc
Confidence 45554443
No 50
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.48 E-value=8.6e-14 Score=118.55 Aligned_cols=103 Identities=19% Similarity=0.255 Sum_probs=82.1
Q ss_pred cccccccceeEEEEccCCcceeEEEEecCCcC----CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 56 MICHVFESDEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 56 ~~~~vf~s~~v~l~k~~~~~lG~~l~~~~~~~----~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
|.-..|+...|.|.|.++++|||+|.++.... ...+++|..|.++|||+ .| |++||+|++|||+++.++++.++
T Consensus 8 ~~~~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~ 85 (117)
T 2csj_A 8 MEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFA 85 (117)
T ss_dssp CSCEEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHH
T ss_pred cccccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHH
Confidence 33345566679999998778999999643210 24579999999999996 55 99999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEeCCceeEEEeeCC
Q psy3479 132 QTYIKNSKNQTVVKLTVVPCAPVVEVKIKRP 162 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~~~~~~~~~~~rp 162 (518)
+.+|+.++ ..|.|+|.|........++||
T Consensus 86 ~~~l~~~~--~~v~l~v~R~~~~~~~~~~~p 114 (117)
T 2csj_A 86 VQQLRKSG--KIAAIVVKRPRKVQVAPLSGP 114 (117)
T ss_dssp HHHHHHSC--SEEEEEEEEEEECCCCCCCCC
T ss_pred HHHHhcCC--CeEEEEEEECCcccccccCCC
Confidence 99999976 499999998765554445443
No 51
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.48 E-value=1.8e-13 Score=114.53 Aligned_cols=89 Identities=30% Similarity=0.461 Sum_probs=74.8
Q ss_pred cceeEEEEccCCcceeEEEEecCCc----CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~----~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
+...|.|.|... +|||+|.+.+.+ ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 9 ~~~~v~l~k~~~-glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 9 ELFPVELEKDED-GLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEEECBTT-BSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred eEEEEEEEECCC-cccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 334588888765 599999973111 124589999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeCCc
Q psy3479 138 SKNQTVVKLTVVPCAP 153 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~~ 153 (518)
.+ ..|+|+|.|..+
T Consensus 88 ~~--~~v~l~v~R~~~ 101 (107)
T 1wf8_A 88 TK--GNVRFVIGREKP 101 (107)
T ss_dssp CC--SEEEEEEEEECC
T ss_pred CC--CeEEEEEEeCCC
Confidence 86 489999988654
No 52
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.48 E-value=3.3e-13 Score=112.58 Aligned_cols=88 Identities=28% Similarity=0.356 Sum_probs=74.5
Q ss_pred eEEEEccCCcceeEEEEecCCc---CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 65 EVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~---~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
+|+|.|.+++ |||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~v~l~k~~~g-lG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-- 82 (105)
T 2awx_A 6 EIKLIKGPKG-LGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS-- 82 (105)
T ss_dssp EEEEECBTTB-SSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC--
T ss_pred EEEEEECCCC-CCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 5889998764 99999964321 12358999999999999999999999999999999999999999999999886
Q ss_pred cEEEEEEEeCCcee
Q psy3479 142 TVVKLTVVPCAPVV 155 (518)
Q Consensus 142 ~~v~l~v~~~~~~~ 155 (518)
..|+|+|.|.....
T Consensus 83 ~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 83 DFVYLKVAKPTSMY 96 (105)
T ss_dssp SEEEEEEECCCC--
T ss_pred CeEEEEEEcCCCCC
Confidence 48999999876543
No 53
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.48 E-value=2.4e-13 Score=113.89 Aligned_cols=89 Identities=26% Similarity=0.343 Sum_probs=74.1
Q ss_pred cceeEEEEccCCcceeEEEEecCC------cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGW------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 135 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~------~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l 135 (518)
+...|+|.|. +++|||+|.++.. .....+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+|
T Consensus 8 ~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~ 86 (107)
T 1uhp_A 8 KSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAF 86 (107)
T ss_dssp EEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3446899987 4559999996431 11356899999999999999955999999999999999999999999999
Q ss_pred hcCCCCcEEEEEEEeCCc
Q psy3479 136 KNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 136 ~~~~~~~~v~l~v~~~~~ 153 (518)
+..++ .|.|+|.|..|
T Consensus 87 ~~~~~--~v~l~v~R~~~ 102 (107)
T 1uhp_A 87 KTAKE--PIVVQVLRRTS 102 (107)
T ss_dssp HHCCS--SEEEEEEECCS
T ss_pred HcCCC--cEEEEEEeCCC
Confidence 98874 88999887654
No 54
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.48 E-value=2.5e-13 Score=118.14 Aligned_cols=88 Identities=24% Similarity=0.345 Sum_probs=75.4
Q ss_pred ceeEEEEccCCcceeEEEEecCCcC----------CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQ 132 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~----------~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~ 132 (518)
.+.|+|.|...++|||+|.++.... ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++
T Consensus 28 ~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~ 106 (132)
T 3l4f_D 28 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 106 (132)
T ss_dssp CCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHH
T ss_pred CEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 3469999987778999999765311 12379999999999999999 999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEEEeCCc
Q psy3479 133 TYIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 133 ~~l~~~~~~~~v~l~v~~~~~ 153 (518)
.+|+++++ .|.|+|.+..+
T Consensus 107 ~~l~~~g~--~v~l~v~~~~~ 125 (132)
T 3l4f_D 107 NMIRQGGN--TLMVKVVMVTR 125 (132)
T ss_dssp HHHHHTTT--EEEEEEECCCC
T ss_pred HHHHcCCC--EEEEEEEECCC
Confidence 99999774 89999987653
No 55
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=1.3e-13 Score=117.29 Aligned_cols=86 Identities=30% Similarity=0.394 Sum_probs=73.3
Q ss_pred eeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
++|+|.|...+ |||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..++
T Consensus 27 ~~v~L~k~~~g-lGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-- 103 (117)
T 2fne_A 27 KSITLERGPDG-LGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG-- 103 (117)
T ss_dssp EEEEECCBTTB-TSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS--
T ss_pred EEEEEEeCCCc-ccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--
Confidence 46999998754 99999964210 113479999999999999999999999999999999999999999999999875
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|+|+|.|..
T Consensus 104 ~v~l~v~R~g 113 (117)
T 2fne_A 104 TVTLMVLSSD 113 (117)
T ss_dssp SEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 5999998754
No 56
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.47 E-value=4.8e-13 Score=110.74 Aligned_cols=88 Identities=26% Similarity=0.308 Sum_probs=74.6
Q ss_pred ceeEEEEccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
.++|+|.|.+ .+|||+|.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 8 ~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 86 (101)
T 2jik_A 8 EEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG 86 (101)
T ss_dssp EEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCC
T ss_pred cEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3469999987 55999999743211 1458999999999999999999999999999999999999999999999876
Q ss_pred CCcEEEEEEEeCCc
Q psy3479 140 NQTVVKLTVVPCAP 153 (518)
Q Consensus 140 ~~~~v~l~v~~~~~ 153 (518)
..|+|+|.|..+
T Consensus 87 --~~v~l~v~R~~~ 98 (101)
T 2jik_A 87 --YAVSLRVQHRLE 98 (101)
T ss_dssp --SEEEEEEEEESC
T ss_pred --CeEEEEEEeCCC
Confidence 489999987643
No 57
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.47 E-value=1.8e-13 Score=118.34 Aligned_cols=88 Identities=23% Similarity=0.317 Sum_probs=72.3
Q ss_pred EEEEccCCcceeEEEEecCCc--CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC----
Q psy3479 66 VVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK---- 139 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~--~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~---- 139 (518)
|.|.|....+|||+|.+.... ....+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|+++.
T Consensus 29 v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 29 IPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp EECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcccc
Confidence 555656667799999864311 01347999999999999999999999999999999999999999999999871
Q ss_pred -CCcEEEEEEEeCCc
Q psy3479 140 -NQTVVKLTVVPCAP 153 (518)
Q Consensus 140 -~~~~v~l~v~~~~~ 153 (518)
.+..|+|+|.|..+
T Consensus 109 ~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 109 NIRGMIQLVILRRSG 123 (127)
T ss_dssp HHTCEEEEEEEECSC
T ss_pred CCCCEEEEEEEeCCC
Confidence 12589999988753
No 58
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=116.45 Aligned_cols=88 Identities=26% Similarity=0.323 Sum_probs=75.4
Q ss_pred eeEEEEccCCcceeEEEEecCC-------cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy3479 64 DEVVVPKAKGEILGVVIVESGW-------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 136 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~-------~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~ 136 (518)
..|.|.|.++++|||+|.++.. +....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 17 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 96 (117)
T 2ehr_A 17 RIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIK 96 (117)
T ss_dssp EEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4689999887789999986431 122468999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEeCCc
Q psy3479 137 NSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 137 ~~~~~~~v~l~v~~~~~ 153 (518)
..+ ..|+|+|.|...
T Consensus 97 ~~g--~~v~l~v~r~~~ 111 (117)
T 2ehr_A 97 NAG--NPVVFIVQSLSS 111 (117)
T ss_dssp TSC--SSEEEEECCBSC
T ss_pred cCC--CeEEEEEEECCC
Confidence 976 488888877643
No 59
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.47 E-value=2.6e-13 Score=111.46 Aligned_cols=89 Identities=25% Similarity=0.398 Sum_probs=74.0
Q ss_pred cceeEEEEccCCcceeEEEEecCCc--CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~--~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
+..+|.|.|.. .+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+..+
T Consensus 3 ~~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 3 RTVEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEEECBT-TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEeCC-CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34568888865 4599999864321 12458999999999999999999999999999999999999999999999955
Q ss_pred CCcEEEEEEEeCCc
Q psy3479 140 NQTVVKLTVVPCAP 153 (518)
Q Consensus 140 ~~~~v~l~v~~~~~ 153 (518)
..++|+|.|...
T Consensus 82 --~~v~l~v~R~~~ 93 (97)
T 2jil_A 82 --QEAALLIEYDVS 93 (97)
T ss_dssp --SEEEEEEEEECC
T ss_pred --CeEEEEEEeCCC
Confidence 589999988654
No 60
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=7.2e-13 Score=113.83 Aligned_cols=87 Identities=20% Similarity=0.306 Sum_probs=74.9
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+|.|.|...+ |||+|.++.. ...+++|..|.++|||+++|+|++||+|++|||+.+.++++++++++|++.+.+..|
T Consensus 22 ~v~l~~~~~g-lG~~~~~g~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v 98 (123)
T 1ueq_A 22 STTLKKSNMG-FGFTIIGGDE--PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSV 98 (123)
T ss_dssp EEEEECCTTS-CSEEEECCSS--SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEeCCCc-eeEEEecccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 5888887555 9999986432 245799999999999999999999999999999999999999999999997544699
Q ss_pred EEEEEeCCce
Q psy3479 145 KLTVVPCAPV 154 (518)
Q Consensus 145 ~l~v~~~~~~ 154 (518)
+|+|.|..+.
T Consensus 99 ~l~v~R~~~~ 108 (123)
T 1ueq_A 99 NLVLCRGYPL 108 (123)
T ss_dssp EEEEEESCCC
T ss_pred EEEEEeCCCC
Confidence 9999987654
No 61
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.46 E-value=5.2e-13 Score=108.04 Aligned_cols=83 Identities=27% Similarity=0.326 Sum_probs=73.0
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|.|.|..++ |||++.+... ..+++|..|.++|||+++| |++||+|++|||+++.+++|.++.++|+..+ .
T Consensus 5 ~r~v~l~k~~~g-~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~ 77 (90)
T 2he4_A 5 PRLCHLRKGPQG-YGFNLHSDKS---RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKARE--D 77 (90)
T ss_dssp CEEEEEECBTTB-CCEEEEECSS---SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSS--S
T ss_pred cEEEEEEECCCC-ccEEEEccCC---CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 446889998765 9999986553 4689999999999999999 9999999999999999999999999999985 5
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|.|+|.|..
T Consensus 78 ~v~l~v~r~~ 87 (90)
T 2he4_A 78 EARLLVVGPS 87 (90)
T ss_dssp EEEEEEECCC
T ss_pred cEEEEEEccC
Confidence 8999988753
No 62
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.46 E-value=5.9e-13 Score=107.91 Aligned_cols=84 Identities=23% Similarity=0.276 Sum_probs=72.8
Q ss_pred ceeEEEEccCC-cceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 63 SDEVVVPKAKG-EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 63 s~~v~l~k~~~-~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
..+|+|.|..+ .+|||+|.++.. ..+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+++..+
T Consensus 7 ~~~v~l~k~~~~~~~G~~~~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g-- 80 (91)
T 1m5z_A 7 LHKVTLYKDSGMEDFGFSVADGLL---EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG-- 80 (91)
T ss_dssp EEEEEEECCTTCSSSSEEEEECTT---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST--
T ss_pred eEEEEEEECCCCCCccEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 34688998766 579999986443 4689999999999999999 9999999999999999999999999999876
Q ss_pred cEEEEEEEeCC
Q psy3479 142 TVVKLTVVPCA 152 (518)
Q Consensus 142 ~~v~l~v~~~~ 152 (518)
..|.|+|.|.+
T Consensus 81 ~~v~l~v~R~p 91 (91)
T 1m5z_A 81 NKLDLVISRNP 91 (91)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEEeCc
Confidence 48999998753
No 63
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.46 E-value=5.7e-13 Score=109.15 Aligned_cols=87 Identities=28% Similarity=0.370 Sum_probs=73.3
Q ss_pred eeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
..|.|.|... +|||++.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+ .
T Consensus 7 ~~v~l~k~~~-~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g--~ 83 (96)
T 1d5g_A 7 FEVELAKNDN-SLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG--Q 83 (96)
T ss_dssp EEEEEECSSS-SCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC--S
T ss_pred EEEEEEeCCC-CCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 3588888764 599999954321 12458999999999999999999999999999999999999999999999876 4
Q ss_pred EEEEEEEeCCc
Q psy3479 143 VVKLTVVPCAP 153 (518)
Q Consensus 143 ~v~l~v~~~~~ 153 (518)
.|+|+|.|...
T Consensus 84 ~v~l~v~R~~~ 94 (96)
T 1d5g_A 84 VVHLLLEKGQS 94 (96)
T ss_dssp EEEEEEECCSC
T ss_pred eEEEEEEcCCC
Confidence 89999987643
No 64
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.46 E-value=7.6e-13 Score=110.57 Aligned_cols=82 Identities=27% Similarity=0.331 Sum_probs=68.4
Q ss_pred EccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEE
Q psy3479 69 PKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVK 145 (518)
Q Consensus 69 ~k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~ 145 (518)
....+.+|||+|.++..-. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|++.+. .|+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~--~v~ 85 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSD--FVY 85 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCS--EEE
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC--eEE
Confidence 4455566999999754211 23489999999999999999999999999999999999999999999999874 999
Q ss_pred EEEEeCC
Q psy3479 146 LTVVPCA 152 (518)
Q Consensus 146 l~v~~~~ 152 (518)
|+|.|..
T Consensus 86 l~v~R~~ 92 (106)
T 4amh_A 86 LKVAKPG 92 (106)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9999875
No 65
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.46 E-value=4.3e-13 Score=109.97 Aligned_cols=86 Identities=24% Similarity=0.329 Sum_probs=72.9
Q ss_pred ceeEEEEccCCcceeEEEEecC-----CcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESG-----WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~-----~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
.+.|.|.|.++++|||+|.+.+ ......+++|..|.++|||+++| |++||+|++|||+++.+++++++.++|+.
T Consensus 5 ~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 5 RKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp EEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3468999998878999999611 11124589999999999999999 99999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeC
Q psy3479 138 SKNQTVVKLTVVPC 151 (518)
Q Consensus 138 ~~~~~~v~l~v~~~ 151 (518)
.++ .|+|+|.+.
T Consensus 84 ~~~--~v~l~v~~~ 95 (96)
T 2ego_A 84 SGN--VLRLETLYG 95 (96)
T ss_dssp TTT--EEEEEEECC
T ss_pred CCC--eEEEEEEEC
Confidence 864 899998753
No 66
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=1e-13 Score=115.33 Aligned_cols=89 Identities=20% Similarity=0.331 Sum_probs=73.8
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
|+...|.|.|...+ |||+|.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.++.
T Consensus 8 ~~~~~v~l~~~~~g-~G~~i~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 84 (103)
T 1uep_A 8 YKELDVHLRRMESG-FGFRILGGDE--PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAAR 84 (103)
T ss_dssp EEEECCEEESSSSS-CCEEECCCCS--TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCc-cCEEEeeecC--CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34446888986555 9999985332 24578999999999999999999999999999999999999999999999832
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
+..|+|+|.|..
T Consensus 85 g~~v~l~v~R~~ 96 (103)
T 1uep_A 85 NGQVNLTVRRKV 96 (103)
T ss_dssp HTEEEEEEEEEC
T ss_pred CCcEEEEEEeCC
Confidence 248999998764
No 67
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.45 E-value=3.7e-13 Score=108.45 Aligned_cols=78 Identities=23% Similarity=0.405 Sum_probs=67.3
Q ss_pred EEEEc-cCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 66 VVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 66 v~l~k-~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+.|.| ..++.|||.+.+ +++|.+|.++|||+++|+|++||+|++|||+++.++++++++++|+++++ .|
T Consensus 4 v~l~~~~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~--~v 73 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG--KL 73 (88)
T ss_dssp EEEECBTTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT--EE
T ss_pred EEEEeCCCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--eE
Confidence 45555 344679999863 68999999999999999999999999999999999999999999999985 89
Q ss_pred EEEEEeCCc
Q psy3479 145 KLTVVPCAP 153 (518)
Q Consensus 145 ~l~v~~~~~ 153 (518)
+|++.+.++
T Consensus 74 ~L~v~~~~~ 82 (88)
T 3e17_A 74 QLVVLRDLE 82 (88)
T ss_dssp EEEECCC--
T ss_pred EEEEeCCCc
Confidence 999976654
No 68
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.45 E-value=7.8e-13 Score=108.76 Aligned_cols=85 Identities=27% Similarity=0.423 Sum_probs=73.7
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|...+ |||++.++.. ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+ ..|
T Consensus 7 ~v~l~~~~~~-lG~~l~~~~~-~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~--~~v 82 (98)
T 2opg_A 7 TIEISKGRTG-LGLSIVGGSD-TLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP--QRV 82 (98)
T ss_dssp EEEEECBTTB-TCEEEEECTT-STTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SEE
T ss_pred EEEEEECCCc-ccEEEecCCC-CCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CeE
Confidence 5888888655 9999986442 22358999999999999999999999999999999999999999999999887 489
Q ss_pred EEEEEeCCc
Q psy3479 145 KLTVVPCAP 153 (518)
Q Consensus 145 ~l~v~~~~~ 153 (518)
.|+|.|...
T Consensus 83 ~l~v~R~~~ 91 (98)
T 2opg_A 83 RLTLYRDEA 91 (98)
T ss_dssp EEEEEECSS
T ss_pred EEEEEcCCC
Confidence 999988654
No 69
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.45 E-value=5.6e-13 Score=110.97 Aligned_cols=87 Identities=26% Similarity=0.334 Sum_probs=75.3
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
+..+.|+|.|.++++|||++.++.. ...+++|..|.+++||+++| |++||+|++|||+.+.++++++++++|+. +
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~- 88 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKA--SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-A- 88 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSS--SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-S-
T ss_pred CCCEEEEEEeCCCCCccEEEEcccC--CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-C-
Confidence 4456799999987789999986432 24579999999999999999 99999999999999999999999999999 3
Q ss_pred CcEEEEEEEeCCc
Q psy3479 141 QTVVKLTVVPCAP 153 (518)
Q Consensus 141 ~~~v~l~v~~~~~ 153 (518)
..|+|+|.|.+.
T Consensus 89 -~~v~l~v~r~~~ 100 (104)
T 1wi2_A 89 -REISMRVRFFSG 100 (104)
T ss_dssp -SSEEEEEECCCC
T ss_pred -CEEEEEEEECCC
Confidence 379999988754
No 70
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.45 E-value=3.9e-13 Score=110.60 Aligned_cols=85 Identities=22% Similarity=0.400 Sum_probs=73.2
Q ss_pred eEEEEccCCcceeEEEEecCCcC----CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~----~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
.|+|.|..+++|||+|.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+..+
T Consensus 8 ~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g- 86 (98)
T 1ihj_A 8 MVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEAD- 86 (98)
T ss_dssp EEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSC-
T ss_pred EEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence 58899977778999998643211 1348999999999999999999999999999999999999999999999865
Q ss_pred CcEEEEEEEeC
Q psy3479 141 QTVVKLTVVPC 151 (518)
Q Consensus 141 ~~~v~l~v~~~ 151 (518)
..|+|+|.|.
T Consensus 87 -~~v~l~v~R~ 96 (98)
T 1ihj_A 87 -FKIELEIQTF 96 (98)
T ss_dssp -SEEEEEEEEC
T ss_pred -CeEEEEEEeC
Confidence 5899999874
No 71
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.45 E-value=6.6e-13 Score=111.24 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=69.1
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.+|+|.|.+.+ |||+|.++. .+.+|+.|.+ +|..+| |++||+|++|||+++.+++|++++++||+++.+..
T Consensus 14 ~~V~L~Kg~~G-~GFsI~~~~-----~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~ 84 (113)
T 3soe_A 14 VTIPLIKGPKG-FGFAIADSP-----TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGAD 84 (113)
T ss_dssp EEEEEECBTTB-SSEEEEEET-----TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCE
T ss_pred EEEEEEECCCc-ccEEEeCCC-----CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCE
Confidence 36999998665 999997543 3678999988 465555 99999999999999999999999999999876679
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|+|+|.|....
T Consensus 85 v~L~V~R~g~~ 95 (113)
T 3soe_A 85 VPLLILRGGPP 95 (113)
T ss_dssp EEEEEEESSCC
T ss_pred EEEEEEECCcc
Confidence 99999998643
No 72
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.44 E-value=6.4e-13 Score=111.17 Aligned_cols=86 Identities=26% Similarity=0.384 Sum_probs=73.3
Q ss_pred eeEEEEccCCcceeEEEEecCCcC----------CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 133 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~----------~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~ 133 (518)
+.|.|.|..++ |||+|.++.... ..|+++|..|.++|||+++| |++||+|++|||+++.++++.+++.
T Consensus 8 r~v~l~k~~~g-~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~ 85 (107)
T 3qe1_A 8 RVVRIVKSESG-YGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVD 85 (107)
T ss_dssp EEEEEECBTTB-TCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHH
T ss_pred EEEEEEECCCC-CCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 46889998775 999998652211 14667899999999999999 9999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEEEeCCc
Q psy3479 134 YIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 134 ~l~~~~~~~~v~l~v~~~~~ 153 (518)
+|+..+ ..|.|+|.|..+
T Consensus 86 ~l~~~g--~~v~l~v~r~~~ 103 (107)
T 3qe1_A 86 LIRAGE--KELILTVLSVES 103 (107)
T ss_dssp HHHHCS--SEEEEEEECSSC
T ss_pred HHHcCC--CEEEEEEEcCCC
Confidence 999876 489999988754
No 73
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.44 E-value=7.2e-13 Score=110.20 Aligned_cols=83 Identities=27% Similarity=0.339 Sum_probs=73.0
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
..|+|.|... +|||++.++.. .++++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++..++ .
T Consensus 13 ~~v~l~k~~~-glG~~~~~~~~---~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~ 86 (104)
T 3i4w_A 13 RRIVIHRGST-GLGFNIVGGEX---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ--T 86 (104)
T ss_dssp EEEEEECBTT-BTSEEEEECC----CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS--E
T ss_pred EEEEEEeCCC-ccCEEEECCCC---CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--e
Confidence 4688998854 59999997553 4589999999999999999999999999999999999999999999999774 8
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|+|+|.|.+
T Consensus 87 v~l~v~r~~ 95 (104)
T 3i4w_A 87 VTIIAQYKP 95 (104)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECc
Confidence 999998764
No 74
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=7.1e-13 Score=110.08 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=74.1
Q ss_pred ccceeEEEEccCCcceeEEEEecCC-cC------CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGW-GS------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 133 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~-~~------~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~ 133 (518)
+.++.|.+.|.+.+.|||++.+... +. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++.+
T Consensus 3 ldp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 3 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp CSCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4556789999887779999986321 00 1258999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEEEeCCc
Q psy3479 134 YIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 134 ~l~~~~~~~~v~l~v~~~~~ 153 (518)
+|++.++ .|+|+|.|..+
T Consensus 83 ~l~~~~~--~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKAGN--PVVFMVQSIIS 100 (103)
T ss_dssp HHHTCCS--SEEEEEECCCC
T ss_pred HHHhCCC--cEEEEEEECCC
Confidence 9999874 89999987654
No 75
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=3.8e-13 Score=112.22 Aligned_cols=85 Identities=20% Similarity=0.357 Sum_probs=72.8
Q ss_pred eEEEEccCCcceeEEEEecCCc----CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 65 EVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~----~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
.|+|.|...+ |||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.++
T Consensus 10 ~v~l~~~~~g-lG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g- 87 (105)
T 1wha_A 10 VACLARSERG-LGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAAS- 87 (105)
T ss_dssp EEEECCCTTC-CSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCC-
T ss_pred EEEEEeCCCc-cCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4888887666 99999964321 12468999999999999999999999999999999999999999999999886
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 88 -~~v~l~v~R~~ 98 (105)
T 1wha_A 88 -PTIALLLEREA 98 (105)
T ss_dssp -SCEEEEEEECC
T ss_pred -CeEEEEEEECC
Confidence 47999998764
No 76
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=1.5e-12 Score=110.10 Aligned_cols=81 Identities=22% Similarity=0.494 Sum_probs=71.9
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|..+++|||++... ..+++|..|.++|||+++|.|++||+|++|||+.+.++++++++++|+..++ .|
T Consensus 28 ~v~l~k~~~~~lG~~i~~~-----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~--~v 100 (113)
T 1va8_A 28 IVRIEKARDIPLGATVRNE-----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHG--TL 100 (113)
T ss_dssp EEEEEECTTCCCCEEEEEC-----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCE--EE
T ss_pred EEEEEeCCCCceeEEEEeC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--eE
Confidence 4899999887799999864 3479999999999999999559999999999999999999999999998874 79
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 101 ~l~v~r~~ 108 (113)
T 1va8_A 101 TFVLIPSS 108 (113)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99888654
No 77
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.44 E-value=6.5e-13 Score=107.07 Aligned_cols=78 Identities=27% Similarity=0.375 Sum_probs=67.9
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+++|+|.|. .++|||+|.+++. ..+||++|.++|+|+++|.|++||+|++|||+++.+++|.+++.+|+++...
T Consensus 5 ~~k~V~l~K~-~~~LG~tI~~~g~----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 5 IEKEVNVYKS-EDSLGLTITDNGV----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp EEEEEEEECC-SSCCCEEEECSSS----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred eEEEEEEEEC-CCCceEEEEcCCC----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 3679999995 5899999986332 3589999999999999999999999999999999999999999999997664
Q ss_pred CCe
Q psy3479 427 MPT 429 (518)
Q Consensus 427 v~~ 429 (518)
.++
T Consensus 80 ~~~ 82 (95)
T 3gge_A 80 ELF 82 (95)
T ss_dssp CEE
T ss_pred CEE
Confidence 433
No 78
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.44 E-value=7.3e-13 Score=111.26 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=74.5
Q ss_pred cceeEEEEccCCcceeEEEEecCCcC----------CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~----------~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
+.+.|.|.|...++|||+|.++.... ...+++|..|.++|||+++| |++||+|++|||+++.+++|.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 34568898877778999999654211 12379999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEeCCc
Q psy3479 132 QTYIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~~~~ 153 (518)
+.+|++.+ ..|.|+|.+..+
T Consensus 86 ~~~l~~~~--~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQGG--NTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHHTT--TEEEEEEEEEEC
T ss_pred HHHHHhCC--CEEEEEEEECCC
Confidence 99999876 489999887643
No 79
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=1.3e-13 Score=116.24 Aligned_cols=87 Identities=29% Similarity=0.459 Sum_probs=74.7
Q ss_pred eeEEEEccCCcceeEEEEecCCc-------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWG-------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 136 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~-------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~ 136 (518)
++|.|.|.++++|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 11 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 90 (111)
T 1uju_A 11 RELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLR 90 (111)
T ss_dssp SCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHS
T ss_pred EEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35899999878899999964421 12458999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEeCC
Q psy3479 137 NSKNQTVVKLTVVPCA 152 (518)
Q Consensus 137 ~~~~~~~v~l~v~~~~ 152 (518)
..+ ..|+|+|.|..
T Consensus 91 ~~g--~~v~l~v~r~~ 104 (111)
T 1uju_A 91 SVG--DTLTVLVCDGF 104 (111)
T ss_dssp SCS--SEEEECCCCCC
T ss_pred cCC--CeEEEEEEECC
Confidence 976 48888887653
No 80
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=113.71 Aligned_cols=93 Identities=22% Similarity=0.335 Sum_probs=77.6
Q ss_pred ccccceeEEEEccCCcceeEEEEecCC-------cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 59 HVFESDEVVVPKAKGEILGVVIVESGW-------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 59 ~vf~s~~v~l~k~~~~~lG~~l~~~~~-------~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
.-+.++++.+.|...+.|||++.+... .....+++|..|.++|||+++|+|++||+|++|||+++.+++++++
T Consensus 21 ~~~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~ 100 (123)
T 2iwq_A 21 QSMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA 100 (123)
T ss_dssp --CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred ccCCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 345567899999887789999986321 0113589999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEeCCc
Q psy3479 132 QTYIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~~~~ 153 (518)
+++|++.++ .|+|+|.|.++
T Consensus 101 ~~~l~~~~~--~v~l~v~r~~~ 120 (123)
T 2iwq_A 101 VEAIRKAGN--PVVFMVQSIIS 120 (123)
T ss_dssp HHHHHHCCS--SEEEEEECCCC
T ss_pred HHHHHcCCC--eEEEEEEECCc
Confidence 999999874 89999988764
No 81
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.2e-12 Score=112.04 Aligned_cols=91 Identities=25% Similarity=0.305 Sum_probs=76.3
Q ss_pred cccceeEEEEccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy3479 60 VFESDEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 136 (518)
Q Consensus 60 vf~s~~v~l~k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~ 136 (518)
..+.++|+|.|.. .+|||+|.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 15 ~~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 15 LVTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CCceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3445579999987 45999999643211 1458999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEeCCc
Q psy3479 137 NSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 137 ~~~~~~~v~l~v~~~~~ 153 (518)
..+ ..|+|+|.|..+
T Consensus 94 ~~g--~~v~l~v~R~~~ 108 (120)
T 2eno_A 94 NAG--YAVSLRVQHRLQ 108 (120)
T ss_dssp HHC--SEEEEEEEEEEE
T ss_pred cCC--CeEEEEEEeCCc
Confidence 876 489999987653
No 82
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.43 E-value=5.6e-13 Score=115.51 Aligned_cols=86 Identities=21% Similarity=0.248 Sum_probs=74.3
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+|+|.|... +|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|++++.+..|
T Consensus 21 ~v~l~~~~~-g~G~~i~g~~~--~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v 97 (129)
T 2kpk_A 21 HTKLRKSSR-GFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 97 (129)
T ss_dssp EEEEEECSS-CCSEEEEEEEE--TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEE
T ss_pred EEEEEECCC-cccEEEeCccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 478888655 49999996432 245799999999999999999999999999999999999999999999998644689
Q ss_pred EEEEEeCCc
Q psy3479 145 KLTVVPCAP 153 (518)
Q Consensus 145 ~l~v~~~~~ 153 (518)
+|+|.|..+
T Consensus 98 ~l~v~R~~~ 106 (129)
T 2kpk_A 98 DLELCRGYP 106 (129)
T ss_dssp EEEEEECSC
T ss_pred EEEEEeCCC
Confidence 999988764
No 83
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.43 E-value=2.5e-13 Score=114.87 Aligned_cols=90 Identities=28% Similarity=0.409 Sum_probs=75.1
Q ss_pred cceeEEEEccCCcceeEEEEecCCcC----CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~----~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
+...|.|.|... +|||+|.+...+. ...+++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~~~-glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 4 ELFPVELEKDSE-GLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEEECCCCSS-CCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEeCCC-CCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 334688888765 5999999732111 24589999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEeCCce
Q psy3479 138 SKNQTVVKLTVVPCAPV 154 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~~~ 154 (518)
++ ..|+|+|.|..+.
T Consensus 83 ~g--~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 83 TK--GRVRFMIGRERPG 97 (113)
T ss_dssp SC--SSCEEEEEECCCC
T ss_pred CC--CeEEEEEEeCCCC
Confidence 86 4899999887654
No 84
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=9e-13 Score=107.24 Aligned_cols=84 Identities=33% Similarity=0.451 Sum_probs=72.2
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|+|.|.. .+|||+|.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..++ .
T Consensus 7 r~v~l~k~~-~glG~~l~~~~~--~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~ 81 (93)
T 2dkr_A 7 GVVELPKTD-EGLGFNIMGGKE--QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQG--S 81 (93)
T ss_dssp CEEEEECCT-TCCCEEEECSSS--SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCS--E
T ss_pred EEEEEEeCC-CCccEEEecccC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--c
Confidence 358899876 459999985432 24579999999999999997799999999999999999999999999998874 7
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|+|+|.|.+
T Consensus 82 v~l~v~r~~ 90 (93)
T 2dkr_A 82 VKLVVRSGP 90 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEeCC
Confidence 999998765
No 85
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.42 E-value=8.2e-13 Score=112.79 Aligned_cols=86 Identities=17% Similarity=0.327 Sum_probs=72.1
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.+.|.|..+.+|||+|.++. +....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+. ..+
T Consensus 18 ~v~l~~~~~~~lG~~i~g~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~-~~~ 95 (119)
T 1x6d_A 18 VTILHKEEGAGLGFSLAGGA-DLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE-PRQ 95 (119)
T ss_dssp EEEEECCTTSCCSEEEECCS-SSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS-SSE
T ss_pred EEEEEeCCCCccCEEEeCCC-CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-CeE
Confidence 36778877888999998543 2235689999999999999999999999999999999999999999999999885 345
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
.|++.|..
T Consensus 96 ~l~v~R~~ 103 (119)
T 1x6d_A 96 AVIVTRKL 103 (119)
T ss_dssp EEEEEECC
T ss_pred EEEEEcCC
Confidence 56666553
No 86
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.42 E-value=8.7e-13 Score=114.31 Aligned_cols=93 Identities=28% Similarity=0.437 Sum_probs=77.7
Q ss_pred cccccceeEEEEccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy3479 58 CHVFESDEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTY 134 (518)
Q Consensus 58 ~~vf~s~~v~l~k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~ 134 (518)
..-|+..+|.|.|..+.+|||++.+..... ...+++|..|.++|||+++|+|++||+|++|||+++.++++++++++
T Consensus 11 ~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 90 (129)
T 2dmz_A 11 SSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEV 90 (129)
T ss_dssp SCCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344666679998877777999999743211 24589999999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEEEeCC
Q psy3479 135 IKNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 135 l~~~~~~~~v~l~v~~~~ 152 (518)
|+..+ ..|.|+|.|..
T Consensus 91 l~~~~--~~v~l~v~R~~ 106 (129)
T 2dmz_A 91 LRNAG--QVVHLTLVRRK 106 (129)
T ss_dssp HHHCC--SSEEEEEEEES
T ss_pred HHcCC--CeEEEEEEeCC
Confidence 99954 58999998764
No 87
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.42 E-value=4.8e-13 Score=113.86 Aligned_cols=88 Identities=20% Similarity=0.252 Sum_probs=75.3
Q ss_pred ceeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcCCC
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-GLPLSTCQTYIKNSKN 140 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~-~~~~~~~~~~l~~~~~ 140 (518)
...|.|.|.++++|||++.++... ....+++|..|.++|||+++|+|++||+|++|||+++. ++++.+++.+|+..+
T Consensus 21 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~- 99 (117)
T 2o2t_A 21 VEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAK- 99 (117)
T ss_dssp EEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCC-
T ss_pred EEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC-
Confidence 346999998878899999864321 12458999999999999999999999999999999998 999999999999976
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 100 -~~v~l~v~R~~ 110 (117)
T 2o2t_A 100 -DTVQLVIARGS 110 (117)
T ss_dssp -SEEEEEEESSC
T ss_pred -CEEEEEEEeCC
Confidence 48999998764
No 88
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.4e-12 Score=109.78 Aligned_cols=87 Identities=26% Similarity=0.415 Sum_probs=74.9
Q ss_pred eEEEEccCCcceeEEEEecCCcC-CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~-~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.|+|.|...+ |||+|.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+ ..
T Consensus 11 ~v~l~~~~~g-lG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~--~~ 87 (110)
T 1um1_A 11 TVELERGPSG-LGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG--KK 87 (110)
T ss_dssp EEEEECCTTC-CCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC--SE
T ss_pred EEEEEECCCc-cCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--Ce
Confidence 4888887754 999999754321 2468999999999999999999999999999999999999999999999986 48
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|+|+|.|....
T Consensus 88 v~l~v~R~~~~ 98 (110)
T 1um1_A 88 MRFLVAKSDVE 98 (110)
T ss_dssp EEEEEECCCHH
T ss_pred EEEEEEeCCcc
Confidence 99999887644
No 89
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=4.1e-13 Score=108.95 Aligned_cols=80 Identities=31% Similarity=0.411 Sum_probs=70.4
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|..+++|||++... ..+++|..|.++|||+++|.|++||+|++|||+++ +.++++++++|++.++ .|
T Consensus 9 ~v~l~k~~~~~lG~~i~~~-----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~--~v 80 (91)
T 2e7k_A 9 MVGIRKTAGEHLGVTFRVE-----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASG--SV 80 (91)
T ss_dssp BCCBCCCTTCCCCEEEEES-----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCS--SB
T ss_pred EEEEEECCCCcEeEEEEec-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCC--eE
Confidence 3677888888899999863 34799999999999999999999999999999999 9999999999998763 78
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
.|+|.|..
T Consensus 81 ~l~v~~~~ 88 (91)
T 2e7k_A 81 ILKILSGP 88 (91)
T ss_dssp CEEEECCS
T ss_pred EEEEEECC
Confidence 88887653
No 90
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.42 E-value=3.1e-13 Score=115.28 Aligned_cols=86 Identities=27% Similarity=0.433 Sum_probs=70.2
Q ss_pred EEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC--CcE
Q psy3479 66 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN--QTV 143 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~--~~~ 143 (518)
+.+.+. + +|||+|.++. ......++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|++... +..
T Consensus 22 ~~~~~~-~-glG~~i~gg~-~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~ 98 (118)
T 1v6b_A 22 LRIKKE-G-SLDLALEGGV-DSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDW 98 (118)
T ss_dssp EEEESC-S-CCCCEEEEBT-TSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSE
T ss_pred EEECCC-C-ccCEEEEccc-CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCe
Confidence 344443 4 5999998643 2333459999999999999996699999999999999999999999999997621 358
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|+|+|.|++|.
T Consensus 99 v~l~v~r~~~~ 109 (118)
T 1v6b_A 99 IDLVVAVCPPK 109 (118)
T ss_dssp EEEEEECCCSC
T ss_pred EEEEEEeCCcc
Confidence 99999998765
No 91
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.41 E-value=1.2e-12 Score=107.25 Aligned_cols=87 Identities=24% Similarity=0.314 Sum_probs=73.4
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
.++.|.|.|...+ |||++.+........+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+..+
T Consensus 3 ~~r~v~l~k~~~~-~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-- 78 (96)
T 2v90_A 3 KPRCLHLEKGPQG-FGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQG-- 78 (96)
T ss_dssp CCEEEEEECBTTB-SCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT--
T ss_pred CCEEEEEEeCCCc-ccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 4556899998765 99999863211123479999999999999999 9999999999999999999999999999974
Q ss_pred cEEEEEEEeCC
Q psy3479 142 TVVKLTVVPCA 152 (518)
Q Consensus 142 ~~v~l~v~~~~ 152 (518)
..|.|+|.|..
T Consensus 79 ~~v~l~v~r~~ 89 (96)
T 2v90_A 79 SCVSLTVVDPE 89 (96)
T ss_dssp TEEEEEEECCC
T ss_pred CEEEEEEECCC
Confidence 58999988754
No 92
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.41 E-value=1.5e-12 Score=108.74 Aligned_cols=84 Identities=30% Similarity=0.429 Sum_probs=70.5
Q ss_pred eEEEEccCCcceeEEEEecC-CcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 65 EVVVPKAKGEILGVVIVESG-WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~-~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.|++ |. +.+|||+|.++. ......+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+ ..
T Consensus 14 ~v~l-~~-~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g--~~ 89 (106)
T 3axa_A 14 TVTL-KK-QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS--SV 89 (106)
T ss_dssp EEEE-EC-SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SE
T ss_pred EEEE-CC-CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--Ce
Confidence 4666 54 455999998632 1223568999999999999999999999999999999999999999999999976 48
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|.|+|.|..
T Consensus 90 v~l~v~R~~ 98 (106)
T 3axa_A 90 VTLEVAKQG 98 (106)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999998764
No 93
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.41 E-value=6.3e-13 Score=111.24 Aligned_cols=84 Identities=23% Similarity=0.302 Sum_probs=72.4
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcC-CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC--C
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCG-QLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN--Q 141 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G-~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~--~ 141 (518)
.|.|.|...++|||.+.++.. ...+++|..|.++|||+++| +|++||+|++|||+++.++++.+++.+|+..++ +
T Consensus 20 ~v~l~~~~~~~~G~~~~gg~~--~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~ 97 (107)
T 3nfk_A 20 LIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHS 97 (107)
T ss_dssp EEEECCCTTSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBT
T ss_pred EEEEEcCCCCCCCEEEEccCC--CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCC
Confidence 488888886779999986432 13479999999999999999 699999999999999999999999999999873 3
Q ss_pred cEEEEEEEe
Q psy3479 142 TVVKLTVVP 150 (518)
Q Consensus 142 ~~v~l~v~~ 150 (518)
..|.|+|.|
T Consensus 98 ~~v~l~v~r 106 (107)
T 3nfk_A 98 GELMLLVRP 106 (107)
T ss_dssp TBEEEEEEC
T ss_pred cEEEEEEEc
Confidence 478888876
No 94
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.41 E-value=1.7e-12 Score=109.49 Aligned_cols=86 Identities=23% Similarity=0.318 Sum_probs=73.4
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
.+.+.|.|.|...+ |||+|.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 23 ~~~~~v~l~~~~~g-lG~~l~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g- 98 (112)
T 2r4h_A 23 MDFYTVELERGAKG-FGFSLRGGRE--YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG- 98 (112)
T ss_dssp CCEEEEEEECBTTB-TSEEEEECGG--GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-
T ss_pred CceEEEEEEcCCCc-cCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 34456889887655 9999986432 2458999999999999999999999999999999999999999999999876
Q ss_pred CcEEEEEEEeC
Q psy3479 141 QTVVKLTVVPC 151 (518)
Q Consensus 141 ~~~v~l~v~~~ 151 (518)
..|+|+|.|.
T Consensus 99 -~~v~l~v~R~ 108 (112)
T 2r4h_A 99 -RRVRLFLKRG 108 (112)
T ss_dssp -TEEEEEEECC
T ss_pred -CeEEEEEEeC
Confidence 4899998764
No 95
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.41 E-value=1e-12 Score=113.09 Aligned_cols=86 Identities=23% Similarity=0.381 Sum_probs=74.6
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|... +|||+|.++. .....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..++ .|
T Consensus 28 ~v~l~k~~~-glG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~--~v 103 (124)
T 2daz_A 28 IIELEKDKN-GLGLSLAGNK-DRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPS--KV 103 (124)
T ss_dssp EEEEECCSS-CCCEEEECBS-STTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCS--EE
T ss_pred EEEEEeCCC-ccCEEEeccC-CCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--eE
Confidence 588898854 5999998643 2234689999999999999999999999999999999999999999999999874 89
Q ss_pred EEEEEeCCce
Q psy3479 145 KLTVVPCAPV 154 (518)
Q Consensus 145 ~l~v~~~~~~ 154 (518)
.|+|.|....
T Consensus 104 ~l~v~R~~~~ 113 (124)
T 2daz_A 104 KLVFIRNEDA 113 (124)
T ss_dssp EEEEEECTTH
T ss_pred EEEEEeCCCc
Confidence 9999887543
No 96
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.41 E-value=9.1e-13 Score=104.08 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=66.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|+|+|...++|||++.+ | +|..+.+++||+++| |+.||+|++|||+++.+++|++++.+|+.++..+
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~~---g------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFKN---G------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CEEEEEECCTTSCCCEEEET---T------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred eEEEEEEECCCCCeEEEEEC---C------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEE
Confidence 57899999877889999974 2 478999999999999 9999999999999999999999999999887776
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 75 ~L~v~ 79 (82)
T 1r6j_A 75 TITIM 79 (82)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66553
No 97
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.40 E-value=1.2e-12 Score=110.23 Aligned_cols=84 Identities=26% Similarity=0.414 Sum_probs=72.6
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
++|.|.|.. .+|||.|.++. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+ ..
T Consensus 17 ~~v~l~~~~-~~lG~~l~~~~----~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g--~~ 89 (111)
T 2dlu_A 17 EEVELINDG-SGLGFGIVGGK----TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG--NS 89 (111)
T ss_dssp EEEEEECCS-SCCCEEEECCS----SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC--SE
T ss_pred EEEEEEeCC-CccCEEEeccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--Ce
Confidence 458888865 45999998533 357999999999999999999999999999999999999999999999876 48
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|.|+|.|....
T Consensus 90 v~l~v~R~~~~ 100 (111)
T 2dlu_A 90 VRMLVARDPAG 100 (111)
T ss_dssp EEEEEEESCTT
T ss_pred EEEEEEeCCCC
Confidence 99999886543
No 98
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.40 E-value=2.5e-12 Score=108.33 Aligned_cols=92 Identities=27% Similarity=0.382 Sum_probs=75.6
Q ss_pred cccceeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy3479 60 VFESDEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS 138 (518)
Q Consensus 60 vf~s~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~ 138 (518)
.++...+.+.+...+ |||+|.+.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.+
T Consensus 9 ~~~~~~~~l~~~~~g-lG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 9 VGKRLNIQLKKGTEG-LGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp SCEEEEEEEECBTTB-TCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred cCcEEEEEEEECCCc-cCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 344456888887655 99999964321 1135899999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEEEEeCC
Q psy3479 139 KNQTVVKLTVVPCA 152 (518)
Q Consensus 139 ~~~~~v~l~v~~~~ 152 (518)
+.+..|.|+|.|..
T Consensus 88 ~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 88 KMEGTVSLLVFRQE 101 (111)
T ss_dssp CCSSEEEEEEEECC
T ss_pred CCCCeEEEEEEeCC
Confidence 43468999998764
No 99
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.40 E-value=2.1e-12 Score=106.02 Aligned_cols=83 Identities=30% Similarity=0.477 Sum_probs=69.8
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|. +++|||++.+... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+..+ ..|
T Consensus 8 ~v~l~~~-~~~lG~~i~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g--~~v 82 (97)
T 1n7e_A 8 TVELKRY-GGPLGITISGTEE--PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAG--ETV 82 (97)
T ss_dssp EEEEECT-TSCCCEEEECCSS--TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SEE
T ss_pred EEEEEeC-CCCcCEEEEcccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeE
Confidence 4777665 4559999985432 2357999999999999999999999999999999999999999999999655 489
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 83 ~l~v~R~~ 90 (97)
T 1n7e_A 83 TLKIKKQT 90 (97)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99987653
No 100
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.40 E-value=2e-12 Score=105.65 Aligned_cols=81 Identities=27% Similarity=0.372 Sum_probs=67.1
Q ss_pred EEEEccCCcceeEEEEecCCc------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 66 VVVPKAKGEILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
|.+.| +.+|||+|.++... ....+++|..|.++|||++ | |++||+|++|||+++.++++.+++.+++..+
T Consensus 7 v~l~~--~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (95)
T 1mfg_A 7 VRVEK--DPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ 82 (95)
T ss_dssp EEEEC--SSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred EEECC--CCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCC
Confidence 44454 44699999974321 1245899999999999999 7 9999999999999999999999999999876
Q ss_pred CCcEEEEEEEeCC
Q psy3479 140 NQTVVKLTVVPCA 152 (518)
Q Consensus 140 ~~~~v~l~v~~~~ 152 (518)
..|+|+|.|.+
T Consensus 83 --~~v~l~v~R~~ 93 (95)
T 1mfg_A 83 --NTVELIIVREV 93 (95)
T ss_dssp --SEEEEEEEEEC
T ss_pred --CeEEEEEEeCC
Confidence 48999998754
No 101
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.40 E-value=2.7e-12 Score=108.65 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=75.6
Q ss_pred cccccccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy3479 56 MICHVFESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 135 (518)
Q Consensus 56 ~~~~vf~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l 135 (518)
+.+.....+.|.|.|...++|||++.++.. ..++++|..|.++|||+++|+|++||+|++|||.++.+.++++++++|
T Consensus 18 ~~~q~~~~~~V~l~~~~~~~lG~~l~~~~~--~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l 95 (114)
T 2gzv_A 18 LYFQSMVPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 95 (114)
T ss_dssp ----CCCCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eeeccCCCEEEEEEECCCCcEeEEEEeCCC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 333344556899999988889999986543 245799999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEEEeC
Q psy3479 136 KNSKNQTVVKLTVVPC 151 (518)
Q Consensus 136 ~~~~~~~~v~l~v~~~ 151 (518)
+..++ .|+|+|.+.
T Consensus 96 ~~~~~--~v~l~v~~~ 109 (114)
T 2gzv_A 96 QEVKG--EVTIHYNKL 109 (114)
T ss_dssp HHCCS--EEEEEEECC
T ss_pred HcCCC--eEEEEEEec
Confidence 98874 688888654
No 102
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.40 E-value=7.8e-13 Score=114.45 Aligned_cols=87 Identities=26% Similarity=0.446 Sum_probs=73.4
Q ss_pred eeEEEEccC-CcceeEEEEecCC------c-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy3479 64 DEVVVPKAK-GEILGVVIVESGW------G-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 135 (518)
Q Consensus 64 ~~v~l~k~~-~~~lG~~l~~~~~------~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l 135 (518)
+.|.|.|.. +++|||+|.++.. + ...++++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|
T Consensus 31 r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 110 (128)
T 1nf3_C 31 RRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMM 110 (128)
T ss_dssp EEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHH
T ss_pred EEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 468899885 5779999986431 0 0135899999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEEEeCC
Q psy3479 136 KNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 136 ~~~~~~~~v~l~v~~~~ 152 (518)
+..+. .|+|+|.|..
T Consensus 111 ~~~~~--~v~l~v~r~~ 125 (128)
T 1nf3_C 111 IANSR--NLIITVRPAN 125 (128)
T ss_dssp HHTTT--SEEEEEECCC
T ss_pred HcCCC--eEEEEEEECC
Confidence 98874 6999988753
No 103
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.40 E-value=1.7e-12 Score=104.27 Aligned_cols=82 Identities=24% Similarity=0.314 Sum_probs=70.3
Q ss_pred EEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEE
Q psy3479 66 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVK 145 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~ 145 (518)
+++.+..+++|||++.++.. ...+++|..|.|+|||+++| |++||+|++|||+++.+++++++.++|+..+ ..|.
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~ 78 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRD--FHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP--SPLR 78 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGG--GTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC--SSEE
T ss_pred EEEEECCCCccCEEEecccC--CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeEE
Confidence 55666666779999986432 14579999999999999999 9999999999999999999999999999987 4899
Q ss_pred EEEEeCC
Q psy3479 146 LTVVPCA 152 (518)
Q Consensus 146 l~v~~~~ 152 (518)
|+|.|..
T Consensus 79 l~v~R~~ 85 (87)
T 2pa1_A 79 LQLDRIT 85 (87)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9988753
No 104
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=2e-12 Score=104.87 Aligned_cols=82 Identities=20% Similarity=0.303 Sum_probs=70.5
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|.|.|..++ |||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|+..++
T Consensus 4 ~r~v~l~~~~~g-~G~~l~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-- 73 (91)
T 2f5y_A 4 YRQITIPRGKDG-FGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPS-- 73 (91)
T ss_dssp EEEEEEECBTTB-TSEEEECS------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSS--
T ss_pred eEEEEEEeCCCC-ccEEEecC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--
Confidence 346888988766 99999742 258999999999999999 99999999999999999999999999998764
Q ss_pred EEEEEEEeCCce
Q psy3479 143 VVKLTVVPCAPV 154 (518)
Q Consensus 143 ~v~l~v~~~~~~ 154 (518)
.|.|+|.|..+.
T Consensus 74 ~v~l~v~R~~~~ 85 (91)
T 2f5y_A 74 EIILLVWRMVPQ 85 (91)
T ss_dssp EEEEEEEECC--
T ss_pred eEEEEEEeCCCC
Confidence 799999887654
No 105
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.39 E-value=1.4e-12 Score=112.02 Aligned_cols=81 Identities=27% Similarity=0.423 Sum_probs=72.0
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
++.|.|...+ |||++.+.+ .+++|..|.++|||+++|+|++||+|++|||+++.+.++++++++|++.+.+..|
T Consensus 30 ~~~l~k~~~g-lG~~i~~~~-----~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v 103 (126)
T 1wif_A 30 QTKLTVGNLG-LGLVVIQNG-----PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVL 103 (126)
T ss_dssp EEEEECCTTC-CCCCEEEET-----TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEE
T ss_pred EEEEecCCce-EeEEEEcCC-----CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEE
Confidence 5788887766 999998633 4689999999999999999999999999999999999999999999996655789
Q ss_pred EEEEEeC
Q psy3479 145 KLTVVPC 151 (518)
Q Consensus 145 ~l~v~~~ 151 (518)
+|+|.|.
T Consensus 104 ~l~V~R~ 110 (126)
T 1wif_A 104 QIKAYRG 110 (126)
T ss_dssp EEEEESS
T ss_pred EEEEEEC
Confidence 9999886
No 106
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.39 E-value=1.6e-12 Score=106.16 Aligned_cols=83 Identities=23% Similarity=0.308 Sum_probs=69.8
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
++.|.|.|..++ |||++..... ..+++|..|.++|||+++| |++||+|++|||+++.+++|++++.+|+..++
T Consensus 6 ~r~v~l~~~~~~-~G~~l~~~~~---~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-- 78 (95)
T 3r68_A 6 PRVVVIKKGSNG-YGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD-- 78 (95)
T ss_dssp CEEEEEECBTTB-CSCEEEEC-----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT--
T ss_pred cEEEEEecCCCc-ccEEEEecCC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--
Confidence 346888887655 9999986443 3589999999999999999 99999999999999999999999999999774
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.+.+++.+..
T Consensus 79 ~~~~~~~r~~ 88 (95)
T 3r68_A 79 QTTLLVLDKE 88 (95)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEECCc
Confidence 7777776543
No 107
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.39 E-value=1.4e-12 Score=108.83 Aligned_cols=83 Identities=20% Similarity=0.251 Sum_probs=73.0
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|.|.|.+++.|||.+..... ..+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+..+ ..
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g--~~ 76 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG--NS 76 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTT---CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTT--TE
T ss_pred EEEEEEeCCCCeeCEEEEEEeC---CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CE
Confidence 4588999998889999985433 4578999999999999999 9999999999999999999999999999776 48
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|+|+|.|..
T Consensus 77 v~l~v~r~~ 85 (106)
T 3ngh_A 77 VTLLVLDGD 85 (106)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEECC
Confidence 999988653
No 108
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.38 E-value=1.8e-12 Score=108.65 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=74.8
Q ss_pred cccceeEEEE-ccCCcceeEEEEecCCcC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy3479 60 VFESDEVVVP-KAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 135 (518)
Q Consensus 60 vf~s~~v~l~-k~~~~~lG~~l~~~~~~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l 135 (518)
-|+..+|.|. +....+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3555568886 355667999998643211 245899999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEEEeCC
Q psy3479 136 KNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 136 ~~~~~~~~v~l~v~~~~ 152 (518)
+..+ ..|+|+|.|..
T Consensus 90 ~~~g--~~v~l~v~R~~ 104 (108)
T 2jre_A 90 RNAG--NPVRLLLIRRL 104 (108)
T ss_dssp HHHC--SEEEEEEEECC
T ss_pred HcCC--CeEEEEEEeCC
Confidence 9855 48999998764
No 109
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.38 E-value=5.5e-13 Score=108.16 Aligned_cols=83 Identities=27% Similarity=0.307 Sum_probs=70.1
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
++.|.|.|.+++ |||++..... .++++|..|.++|||+++| |++||+|++|||+++.+++++++.++|+..+ .
T Consensus 4 pr~v~l~k~~~~-~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g--~ 76 (91)
T 2vsp_A 4 PKLCRLAKGENG-YGFHLNAIRG---LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSG--K 76 (91)
T ss_dssp EEEEEEECBTTB-TSCCCBCCTT---CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSC--S
T ss_pred cEEEEEEeCCCc-ccEEEEeccC---CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 346889998775 9999975332 4578999999999999999 9999999999999999999999999999984 5
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|+|+|.|..
T Consensus 77 ~v~l~v~r~~ 86 (91)
T 2vsp_A 77 NVTLLVCGKK 86 (91)
T ss_dssp EEEEEEEC--
T ss_pred EEEEEEEeCC
Confidence 8999988753
No 110
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.38 E-value=2.2e-12 Score=104.09 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=67.8
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|++. .+.+|||+|.++.. ...+++|..|.|+|||+++| |++||+|++|||+++.++++.+++.+++..+ ..+
T Consensus 6 ~v~~~--~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g--~~v 78 (89)
T 2q3g_A 6 KVVLE--GPAPWGFRLQGGKD--FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACG--ERL 78 (89)
T ss_dssp EEEEE--SSSCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCT--TEE
T ss_pred EEEEc--CCCcccEEEECcCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CEE
Confidence 35554 34669999986432 23478999999999999999 9999999999999999999999999999886 479
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
.|+|.|..
T Consensus 79 ~l~v~R~~ 86 (89)
T 2q3g_A 79 SLGLSRAI 86 (89)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99987753
No 111
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.3e-12 Score=109.57 Aligned_cols=89 Identities=27% Similarity=0.372 Sum_probs=74.3
Q ss_pred cceeEEEEccCCcceeEEEE-----ecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy3479 62 ESDEVVVPKAKGEILGVVIV-----ESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 135 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~-----~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l 135 (518)
+..+|+|.|...+ |||+|. ++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 9 ~~~~v~l~k~~~~-lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 87 (108)
T 1q7x_A 9 DIFEVELAKNDNS-LGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETL 87 (108)
T ss_dssp SEEEEEEESSSCS-CCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHH
T ss_pred cEEEEEEEECCCC-ccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3446889987654 999998 32211 1246899999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEEEeCCc
Q psy3479 136 KNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 136 ~~~~~~~~v~l~v~~~~~ 153 (518)
+..+ ..|+|+|.|...
T Consensus 88 ~~~g--~~v~l~v~R~~~ 103 (108)
T 1q7x_A 88 RNTG--QVVHLLLEKGQS 103 (108)
T ss_dssp HHTT--SEEEEEEECCCC
T ss_pred HcCC--CeEEEEEEeCCc
Confidence 9986 489999988643
No 112
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.7e-12 Score=108.06 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=72.4
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
...|.|.|...+ |||+|.+........+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+|+..+ .
T Consensus 12 ~~~v~l~~~~~g-~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g--~ 88 (104)
T 2djt_A 12 HFSVELVRGYAG-FGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG--P 88 (104)
T ss_dssp CEEEEEECCSSS-CCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC--S
T ss_pred eEEEEEEeCCCC-ccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 345889988765 9999985321111357899999999999999999999999999999999999999999999865 4
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|.|+|.|..
T Consensus 89 ~v~l~v~R~g 98 (104)
T 2djt_A 89 QLHLVIRRPL 98 (104)
T ss_dssp EEEEEECCCC
T ss_pred eEEEEEEECC
Confidence 8899887653
No 113
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.37 E-value=3e-12 Score=105.23 Aligned_cols=83 Identities=22% Similarity=0.265 Sum_probs=70.0
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
..+.+.+.|... +|||++..... ..+++|..|.++|||+++| |++||+|++|||+++.+++++++.++|++.+ +
T Consensus 9 ~~~~~~l~~~~~-g~G~~~~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~ 82 (98)
T 2jxo_A 9 RPRLCTMKKGPS-GYGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG-D 82 (98)
T ss_dssp CCEEEEEECTTT-CCCEEEECCCS---SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT-T
T ss_pred CcEEEEEEeCCC-cccEEEEecCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-C
Confidence 345678888765 49999986442 4589999999999999999 9999999999999999999999999999985 3
Q ss_pred cEEEEEEEe
Q psy3479 142 TVVKLTVVP 150 (518)
Q Consensus 142 ~~v~l~v~~ 150 (518)
..+.|+|.|
T Consensus 83 ~~~~l~v~R 91 (98)
T 2jxo_A 83 ETKLLVVDR 91 (98)
T ss_dssp EEEEEECCH
T ss_pred cEEEEEEEC
Confidence 566677765
No 114
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=2.6e-12 Score=108.80 Aligned_cols=89 Identities=30% Similarity=0.497 Sum_probs=73.1
Q ss_pred ccceeEEEEccCCcceeEEEEecCC----cCC-CCcEEEEEecCCChhhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGW----GSM-LPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTY 134 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~----~~~-~~~~~V~~v~~gg~A~~-~G~L~~GD~Il~VNg~~l~~~~~~~~~~~ 134 (518)
++..+|+|.|..+++|||+|.++.. +.. ...++|..|.++|||++ +| |++||+|++|||+.+.++++++++++
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3445799999888889999986421 111 12569999999999999 66 99999999999999999999999999
Q ss_pred HhcCCCCcEEEEEEEeCC
Q psy3479 135 IKNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 135 l~~~~~~~~v~l~v~~~~ 152 (518)
|+..+ ..|.|+|.|..
T Consensus 88 l~~~g--~~v~l~v~r~~ 103 (114)
T 1uew_A 88 IKDAG--LSVTLRIIPQE 103 (114)
T ss_dssp HHHTT--TEEEEEECCCS
T ss_pred HHcCC--CeEEEEEEeCC
Confidence 99855 58899887653
No 115
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.37 E-value=2.4e-12 Score=107.15 Aligned_cols=86 Identities=24% Similarity=0.292 Sum_probs=72.7
Q ss_pred cccceeEEEEccCCcceeEEEEecC-----CcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy3479 60 VFESDEVVVPKAKGEILGVVIVESG-----WGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTY 134 (518)
Q Consensus 60 vf~s~~v~l~k~~~~~lG~~l~~~~-----~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~ 134 (518)
.+..+++.|.|..+++|||+|.+.. ......+++|..|.++|||+++| |++||+|++|||+.+.++++++++++
T Consensus 13 ~~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 13 WSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp CSCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CCcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 3455678899988878999999721 11124589999999999999999 99999999999999999999999999
Q ss_pred HhcCCCCcEEEEEE
Q psy3479 135 IKNSKNQTVVKLTV 148 (518)
Q Consensus 135 l~~~~~~~~v~l~v 148 (518)
|+..++ .|+|+|
T Consensus 92 l~~~~~--~v~l~v 103 (104)
T 2z17_A 92 IRSSGN--LLTIET 103 (104)
T ss_dssp HHHTTT--EEEEEC
T ss_pred HHhCCC--cEEEEE
Confidence 999864 788775
No 116
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=1e-12 Score=112.18 Aligned_cols=87 Identities=23% Similarity=0.293 Sum_probs=73.3
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC--C
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN--Q 141 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~-G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~--~ 141 (518)
.|.|.|...++|||+|.++.. ...+++|..|.++|||+++ |.|++||+|++|||+++.+++|.+++.+|+.+++ .
T Consensus 18 ~v~l~k~~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~ 95 (119)
T 2cs5_A 18 LIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHS 95 (119)
T ss_dssp EEEECCCSSSCCSEEEEEEGG--GTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCS
T ss_pred EEEEEeCCCCCcCEEEecccC--CCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCC
Confidence 588899887789999996432 2346999999999999999 4499999999999999999999999999998852 1
Q ss_pred cEEEEEEEeCCc
Q psy3479 142 TVVKLTVVPCAP 153 (518)
Q Consensus 142 ~~v~l~v~~~~~ 153 (518)
..|.|+|.|...
T Consensus 96 ~~v~l~v~R~~~ 107 (119)
T 2cs5_A 96 GELMLLVRPNAV 107 (119)
T ss_dssp SCEEEEEECCCC
T ss_pred CEEEEEEEcccc
Confidence 378999987643
No 117
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.35 E-value=3.5e-12 Score=105.88 Aligned_cols=82 Identities=27% Similarity=0.368 Sum_probs=68.6
Q ss_pred eEEEEccCCcceeEEEEecCCc------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy3479 65 EVVVPKAKGEILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS 138 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~ 138 (518)
.|.+.|. .+|||++.++..+ ....+++|..|.++|||++ | |++||+|++|||+++.++++.+++.+++..
T Consensus 14 ~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 89 (103)
T 1n7t_A 14 RVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF 89 (103)
T ss_dssp EEEEECS--SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHHC
T ss_pred EEEEccC--CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhcC
Confidence 3666664 3699999974321 1345899999999999999 7 999999999999999999999999999987
Q ss_pred CCCcEEEEEEEeCC
Q psy3479 139 KNQTVVKLTVVPCA 152 (518)
Q Consensus 139 ~~~~~v~l~v~~~~ 152 (518)
+ ..|+|+|.|..
T Consensus 90 g--~~v~l~v~R~~ 101 (103)
T 1n7t_A 90 Q--NTVELIIVREV 101 (103)
T ss_dssp C--SEEEEEEECCC
T ss_pred C--CeEEEEEEecC
Confidence 7 48999998764
No 118
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.35 E-value=5.3e-12 Score=101.54 Aligned_cols=81 Identities=20% Similarity=0.305 Sum_probs=68.0
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|++ +.+ .+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+ ..|
T Consensus 6 ~v~l-~~~-~~~G~~l~~g~~--~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g--~~v 78 (88)
T 2uzc_A 6 SVSL-VGP-APWGFRLQGGKD--FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCT--GSL 78 (88)
T ss_dssp EEEE-ESS-SCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SEE
T ss_pred EEEE-cCC-CcccEEEECcCC--CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CeE
Confidence 4666 443 459999986432 23478999999999999999 9999999999999999999999999999875 489
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
.|+|.|..
T Consensus 79 ~l~v~R~g 86 (88)
T 2uzc_A 79 NMTLQRES 86 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99987753
No 119
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.35 E-value=8.4e-13 Score=105.06 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=69.4
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|+|.|...+ |||++.+. .+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+..++
T Consensus 3 ~r~v~l~~~~~g-~G~~~~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-- 72 (83)
T 2kv8_A 3 VRSVEVARGRAG-YGFTLSGQ------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSG-- 72 (83)
T ss_dssp EEEEEECCCSSC-CSCBCCCS------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSS--
T ss_pred cEEEEEEeCCCc-ccEEEEcC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--
Confidence 356889998755 99998632 258999999999999999 99999999999999999999999999998864
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|+|+|.|.+
T Consensus 73 ~v~l~v~R~~ 82 (83)
T 2kv8_A 73 VLHMVIAEGV 82 (83)
T ss_dssp CEEEEEECCC
T ss_pred eEEEEEEcCC
Confidence 6999988753
No 120
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.35 E-value=7.1e-12 Score=104.76 Aligned_cols=88 Identities=23% Similarity=0.289 Sum_probs=73.3
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcC----CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 136 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~----~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~ 136 (518)
++...|.|.|.++.+|||+|.++.... ...+++|..|.++|||+ +| |++||+|++|||+++.++++.+++..++
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 344569999998878999999644211 24589999999999999 77 9999999999999999999999999988
Q ss_pred cCCCCcEEEEEEEeCC
Q psy3479 137 NSKNQTVVKLTVVPCA 152 (518)
Q Consensus 137 ~~~~~~~v~l~v~~~~ 152 (518)
..+ ..|+|+|.|..
T Consensus 84 ~~g--~~v~l~v~R~~ 97 (107)
T 2h2b_A 84 KSG--KNAKITIRRKK 97 (107)
T ss_dssp TCC--SEEEEEEEEES
T ss_pred CCC--CEEEEEEEECC
Confidence 766 48999987653
No 121
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.35 E-value=5.3e-12 Score=107.72 Aligned_cols=83 Identities=27% Similarity=0.342 Sum_probs=73.3
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|.|.|...+ |||+|.+... ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+. .
T Consensus 16 ~~v~l~k~~~g-lG~~l~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~ 89 (119)
T 1tp5_A 16 RRIVIHRGSTG-LGFNIVGGED---GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ--T 89 (119)
T ss_dssp EEEEEECTTSC-CCEEEEECGG---GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS--E
T ss_pred EEEEEEECCCC-ccEEEecCCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--e
Confidence 46889987765 9999996542 3689999999999999999999999999999999999999999999998774 8
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|.|+|.|.+
T Consensus 90 v~l~v~r~~ 98 (119)
T 1tp5_A 90 VTIIAQYKP 98 (119)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECC
Confidence 999998764
No 122
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=3.2e-12 Score=109.60 Aligned_cols=90 Identities=22% Similarity=0.386 Sum_probs=75.2
Q ss_pred ceeEEEEccCCcceeEEEEecCC--cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGW--GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~--~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
..+|.|.|.+..+|||+|.+... ......++|..|.+++||+++|+|++||+|++|||+.+.++++++++++|+....
T Consensus 16 ~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 95 (122)
T 1v5q_A 16 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 95 (122)
T ss_dssp EEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTT
T ss_pred eEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34688999877779999986421 1123468999999999999999999999999999999999999999999998853
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
+..|+|+|.|..
T Consensus 96 g~~v~l~v~R~~ 107 (122)
T 1v5q_A 96 TSKVTLEIEFDV 107 (122)
T ss_dssp TTCEEEEEEEEC
T ss_pred CCeEEEEEEECC
Confidence 358999988754
No 123
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.35 E-value=9.5e-12 Score=101.96 Aligned_cols=87 Identities=25% Similarity=0.383 Sum_probs=72.2
Q ss_pred cceeEEEEccCCcceeEEEEecCC----cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKN 137 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~----~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~ 137 (518)
+...+.+.+..+ +|||+|.++.. .....+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 3 ~~~~v~~~~~~~-glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 3 EELTLTILRQTG-GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp CEEEEEEECBTT-BSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEEEeCCC-ceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 445688888855 59999986432 1124689999999999999999 99999999999999999999999999988
Q ss_pred CCCCcEEEEEEEeCC
Q psy3479 138 SKNQTVVKLTVVPCA 152 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~ 152 (518)
.+ ..|+|+|.|..
T Consensus 81 ~g--~~v~l~v~R~g 93 (97)
T 2w4f_A 81 AG--TAVQMRVWRER 93 (97)
T ss_dssp SC--SEEEEEEECCS
T ss_pred CC--CeEEEEEEeCC
Confidence 66 48999998753
No 124
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.34 E-value=3.6e-12 Score=108.18 Aligned_cols=86 Identities=33% Similarity=0.400 Sum_probs=72.8
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
..|.|.|...+ |||+|.++.. ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+ ..
T Consensus 19 ~~v~l~~~~~g-lG~~l~~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~--~~ 94 (116)
T 2dm8_A 19 MIIEISKGRSG-LGLSIVGGKD-TPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP--QK 94 (116)
T ss_dssp EEEEEECCSSC-CCCCCBCCTT-SSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC--SE
T ss_pred EEEEEEECCCc-ccEEEeCCCC-CCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--Ce
Confidence 45888887655 9999985332 22258999999999999999999999999999999999999999999999887 48
Q ss_pred EEEEEEeCCc
Q psy3479 144 VKLTVVPCAP 153 (518)
Q Consensus 144 v~l~v~~~~~ 153 (518)
|+|+|.|...
T Consensus 95 v~l~v~R~~~ 104 (116)
T 2dm8_A 95 VRLVVYRDEA 104 (116)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEeCCc
Confidence 9999987643
No 125
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.34 E-value=6.6e-12 Score=102.81 Aligned_cols=87 Identities=25% Similarity=0.351 Sum_probs=71.1
Q ss_pred cceeEEEEccCCcceeEEEEecCCc--CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~--~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
+...+.+.|...+ |||++.+.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+..+
T Consensus 4 ~~~~v~l~~~~~~-lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (97)
T 2iwn_A 4 ETFDVELTKNVQG-LGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 82 (97)
T ss_dssp EEEEEEEECBTTB-SCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEecCCCC-CcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3345778776555 99999864210 12458999999999999999999999999999999999999999999999865
Q ss_pred CCcEEEEEEEeC
Q psy3479 140 NQTVVKLTVVPC 151 (518)
Q Consensus 140 ~~~~v~l~v~~~ 151 (518)
..|.|+|.|.
T Consensus 83 --~~v~l~v~r~ 92 (97)
T 2iwn_A 83 --QTVLLTLMRR 92 (97)
T ss_dssp --SEEEEEEEEE
T ss_pred --CeEEEEEEeC
Confidence 4899988764
No 126
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.34 E-value=8.3e-12 Score=106.83 Aligned_cols=90 Identities=28% Similarity=0.391 Sum_probs=73.5
Q ss_pred ccceeEEEEccCCcceeEEEEecCCc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
++...+.+.+...+ |||+|...... ....+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|+.++
T Consensus 29 ~~~~~v~l~~~~~~-lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 107 (121)
T 2kom_A 29 GKRLNIQLKKGTEG-LGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK 107 (121)
T ss_dssp CEEEEEEEECCTTC-CCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CeEEEEEEEcCCCc-EeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 33445777876555 99999864321 11357999999999999999999999999999999999999999999999875
Q ss_pred CCcEEEEEEEeC
Q psy3479 140 NQTVVKLTVVPC 151 (518)
Q Consensus 140 ~~~~v~l~v~~~ 151 (518)
.+..|+|+|.|.
T Consensus 108 ~g~~v~l~v~R~ 119 (121)
T 2kom_A 108 MEGTVSLLVFRQ 119 (121)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 346899998764
No 127
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.34 E-value=7.5e-12 Score=100.69 Aligned_cols=80 Identities=21% Similarity=0.197 Sum_probs=66.0
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|+|.|..++ |||++..... ..+++|..+ ++|||+ +| |++||+|++|||+++.++++++++++|++...+..|
T Consensus 6 ~v~l~k~~~g-~G~~~~~~~~---~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 78 (88)
T 3bpu_A 6 TVHIVKGPMG-FGFTIADSPG---GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEV 78 (88)
T ss_dssp EEEEECBTTB-SSCEEEECTT---SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEcCCCc-eeEEEEecCC---CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEE
Confidence 5889998765 9999986432 357899887 999999 77 999999999999999999999999999975444689
Q ss_pred EEEEEeC
Q psy3479 145 KLTVVPC 151 (518)
Q Consensus 145 ~l~v~~~ 151 (518)
.|+|.|.
T Consensus 79 ~l~v~R~ 85 (88)
T 3bpu_A 79 TLLVQRQ 85 (88)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 9998764
No 128
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.34 E-value=6.8e-12 Score=101.55 Aligned_cols=83 Identities=17% Similarity=0.294 Sum_probs=67.8
Q ss_pred eEEEEccCC--cceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 65 EVVVPKAKG--EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 65 ~v~l~k~~~--~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.|+|+|.+. .+|||+|..... ....+++|..|.++|||+++| |+.||+|++|||+++.+++++++.++|++.
T Consensus 9 ~v~i~k~~~~~~~~Gf~v~~~~~-~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~~---- 82 (94)
T 3kzd_A 9 SIHIEKSDTAADTYGFSLSSVEE-DGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP---- 82 (94)
T ss_dssp EEEEEC------CCSEEEEEECS-SSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHSS----
T ss_pred EEEEEeCCCCcCCcCEEEEecCC-CCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhCC----
Confidence 588899875 469999986332 124589999999999999999 999999999999999999999999999853
Q ss_pred EEEEEEEeCCc
Q psy3479 143 VVKLTVVPCAP 153 (518)
Q Consensus 143 ~v~l~v~~~~~ 153 (518)
.++|+|...|+
T Consensus 83 ~l~ltV~~~p~ 93 (94)
T 3kzd_A 83 SLGLLVRTYPE 93 (94)
T ss_dssp EEEEEEEECCC
T ss_pred eEEEEEEecCC
Confidence 68888877654
No 129
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.33 E-value=4.3e-12 Score=105.16 Aligned_cols=83 Identities=23% Similarity=0.299 Sum_probs=71.5
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|+|.|...+ |||++..... ..+++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|++.+ .
T Consensus 7 ~r~v~l~k~~~g-~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g--~ 79 (102)
T 2d90_A 7 GRVVVIKKGSNG-YGFYLRAGPE---QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG--D 79 (102)
T ss_dssp SEEEEEECCSSS-SSCEEEECSS---SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHST--T
T ss_pred CEEEEEeeCCCC-ccEEEEeecC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 346888987765 9999986432 4589999999999999999 9999999999999999999999999999865 4
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|.|+|.|..
T Consensus 80 ~v~l~v~r~~ 89 (102)
T 2d90_A 80 QTTLLVLDKE 89 (102)
T ss_dssp EEEEEECSTT
T ss_pred EEEEEEEECC
Confidence 8999887653
No 130
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.33 E-value=5.2e-12 Score=107.46 Aligned_cols=87 Identities=22% Similarity=0.374 Sum_probs=74.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+.|.|.|..+.+|||+|.++... ....+++|..|.++|+|+++|+|++||+|++|||.++.++++.++..+++.++..
T Consensus 25 ~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 104 (118)
T 3b76_A 25 EKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSS 104 (118)
T ss_dssp EEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSE
T ss_pred cEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 578999997778999999973311 1234799999999999999999999999999999999999999999999988877
Q ss_pred CCeeEEEe
Q psy3479 427 MPTSMFRL 434 (518)
Q Consensus 427 v~~~v~r~ 434 (518)
+.+.+.|.
T Consensus 105 v~L~v~R~ 112 (118)
T 3b76_A 105 IVLKALEV 112 (118)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
Confidence 76666654
No 131
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.33 E-value=8.1e-12 Score=103.29 Aligned_cols=86 Identities=51% Similarity=0.848 Sum_probs=71.0
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--h
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--L 423 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~ 423 (518)
+..++|.+.|..+.+|||++.+.+.+...++++|..|.++|||++++.|++||+|++|||+++.+++++++..+|+. .
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45688999987778999999864444445579999999999999965699999999999999998999999999998 4
Q ss_pred cCcCCeeE
Q psy3479 424 MKTMPTSM 431 (518)
Q Consensus 424 ~~~v~~~v 431 (518)
+..+.+.+
T Consensus 88 g~~v~l~v 95 (101)
T 2yt7_A 88 QTSVTLSI 95 (101)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 45444444
No 132
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.33 E-value=1.4e-12 Score=125.97 Aligned_cols=88 Identities=26% Similarity=0.252 Sum_probs=75.7
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|+|.|.++++|||+|.++.. ...+++|..|.+||||++++.|++||+|++|||+++.+++|.+++.+|++.++
T Consensus 78 ~r~V~L~k~~~~glGf~I~gg~d--~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~-- 153 (263)
T 1z87_A 78 RRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGK-- 153 (263)
T ss_dssp SEEECCCTTTTCCCCCEEEEETT--TTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCS--
T ss_pred cEEEEEEeCCCCCEeEEEeeccC--CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCC--
Confidence 35699999887889999996542 13579999999999999965599999999999999999999999999999874
Q ss_pred EEEEEEEeCCce
Q psy3479 143 VVKLTVVPCAPV 154 (518)
Q Consensus 143 ~v~l~v~~~~~~ 154 (518)
.|+|+|.|....
T Consensus 154 ~V~L~V~R~~~~ 165 (263)
T 1z87_A 154 EVVLEVKYMKEV 165 (263)
T ss_dssp CCCEEEECCSSS
T ss_pred eEEEEEEeCccc
Confidence 799999886543
No 133
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.32 E-value=6.9e-11 Score=111.08 Aligned_cols=60 Identities=18% Similarity=0.189 Sum_probs=47.7
Q ss_pred CCcEEEEEecCCChhhhcCCCCCC-CEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeC
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIG-DQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPC 151 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~G-D~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~ 151 (518)
..|++|..|.|+|||+++| |+.| |+|++|||+.+........ .+++... +..|+|+|.|.
T Consensus 15 ~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~-g~~v~l~v~R~ 75 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANV-EKPVKMLIYSS 75 (209)
T ss_dssp SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTT-TSCEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCC-CCEEEEEEEec
Confidence 4589999999999999999 9999 9999999999998875443 4444443 24777777653
No 134
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.31 E-value=5.5e-12 Score=100.73 Aligned_cols=80 Identities=21% Similarity=0.279 Sum_probs=66.5
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|+|. . ..+|||++.++.. ...+++|..|.|+|||+++| |++||+|++|||+++.++++.++..+++..++ .|
T Consensus 4 ~v~l~-~-~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~v 76 (85)
T 1rgw_A 4 SVTLT-G-PGPWGFRLQGGKD--FNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASY--NL 76 (85)
T ss_dssp EEEEC-C-SSCCCEEECCCGG--GTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSS--CE
T ss_pred EEEEe-C-CCccCEEEEeccC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCC--eE
Confidence 46663 3 3459999985332 23468999999999999999 99999999999999999999999999998774 68
Q ss_pred EEEEEeC
Q psy3479 145 KLTVVPC 151 (518)
Q Consensus 145 ~l~v~~~ 151 (518)
.|+|.|.
T Consensus 77 ~l~v~R~ 83 (85)
T 1rgw_A 77 SLTLQKS 83 (85)
T ss_dssp EEEEESC
T ss_pred EEEEEeC
Confidence 8888764
No 135
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.31 E-value=2e-11 Score=102.87 Aligned_cols=91 Identities=25% Similarity=0.327 Sum_probs=76.7
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+|+|.|...++|||++..... ..+++|..|.++|||+++|.|++||+|++|||..+.+++++++.++|+... +..|
T Consensus 4 ~v~l~~~~~~glG~~~~~~~~---~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-g~~v 79 (112)
T 1qau_A 4 SVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA-SETH 79 (112)
T ss_dssp EEEEECBTTTBTSEEEEECSS---SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSC-SSSE
T ss_pred EEEEEcCCCCceeEEEEecCC---CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCcE
Confidence 588888877779999986542 468999999999999999944999999999999999999999999999864 3589
Q ss_pred EEEEEeCCceeEEEe
Q psy3479 145 KLTVVPCAPVVEVKI 159 (518)
Q Consensus 145 ~l~v~~~~~~~~~~~ 159 (518)
.|+|.|......+.+
T Consensus 80 ~l~v~R~g~~~~~~~ 94 (112)
T 1qau_A 80 VVLILRGPEGFTTHL 94 (112)
T ss_dssp EEEEEECCTTSEEEE
T ss_pred EEEEEeCCcccceEe
Confidence 999998765544444
No 136
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.31 E-value=1.6e-11 Score=102.06 Aligned_cols=84 Identities=25% Similarity=0.338 Sum_probs=68.0
Q ss_pred eEEEEccC---CcceeEEEEecCCc----------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 65 EVVVPKAK---GEILGVVIVESGWG----------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 65 ~v~l~k~~---~~~lG~~l~~~~~~----------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
.+++.|.. ..+|||++.++..- ....+++|..|.++|||+++| |++||+|++|||+++.+++|+++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 35555532 23699999953321 235689999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEe
Q psy3479 132 QTYIKNSKNQTVVKLTVVP 150 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~ 150 (518)
+.+|++... ..|.|+|.|
T Consensus 86 ~~~l~~~~g-~~v~l~v~R 103 (104)
T 3sfj_A 86 RKRLTKRSE-EVVRLLVTR 103 (104)
T ss_dssp HHHHTCTTC-SEEEEEEEE
T ss_pred HHHHHhCCC-CEEEEEEEc
Confidence 999987543 589998876
No 137
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=1.9e-12 Score=107.45 Aligned_cols=87 Identities=26% Similarity=0.325 Sum_probs=72.4
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
|+...+.+.|...+ |||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 10 ~~~~~v~l~~~~~g-~G~~~~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g- 85 (103)
T 1wfv_A 10 FDYFTVDMEKGAKG-FGFSIRGGRE--YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG- 85 (103)
T ss_dssp SCCEECCEECCTTS-SSBCCEEETT--TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHC-
T ss_pred ceEEEEEEecCCCc-CCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 33445777877655 9999986542 1347999999999999999999999999999999999999999999999666
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 86 -~~v~l~v~R~~ 96 (103)
T 1wfv_A 86 -RRVRLLLKRGT 96 (103)
T ss_dssp -SEECEEEECTT
T ss_pred -CeEEEEEEECC
Confidence 48888887753
No 138
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.30 E-value=4.5e-12 Score=106.20 Aligned_cols=86 Identities=17% Similarity=0.233 Sum_probs=70.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh---c
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL---M 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~---~ 424 (518)
.++|.|.|....+|||+|.++.......+++|..|.++|||+++|+|++||+|++|||+++.+++|+++..+|+.+ .
T Consensus 6 ~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 85 (108)
T 3cbz_A 6 IITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKP 85 (108)
T ss_dssp EEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSS
T ss_pred EEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCC
Confidence 4689999866789999999732212245899999999999999999999999999999999999999999999987 3
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 86 ~~v~l~v~R 94 (108)
T 3cbz_A 86 GPIVLTVAK 94 (108)
T ss_dssp SCEEEEEEC
T ss_pred CeEEEEEEe
Confidence 344444433
No 139
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=3.4e-12 Score=106.55 Aligned_cols=83 Identities=22% Similarity=0.274 Sum_probs=71.1
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|.|.|. +++|||+|..... ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..++
T Consensus 9 ~r~v~l~k~-~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~-- 81 (106)
T 2eei_A 9 PRLCYLVKE-GGSYGFSLKTVQG---KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGS-- 81 (106)
T ss_dssp SEEEEEECC-SSSCSCCEECCSS---CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCS--
T ss_pred CEEEEEEEC-CCCCCEEEEeccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC--
Confidence 346888886 5559999985432 4689999999999999999 99999999999999999999999999998764
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.+.|+|.|..
T Consensus 82 ~v~l~v~r~~ 91 (106)
T 2eei_A 82 RVMFLLVDKE 91 (106)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEEcCc
Confidence 8888887654
No 140
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.30 E-value=1e-11 Score=103.96 Aligned_cols=82 Identities=22% Similarity=0.278 Sum_probs=69.0
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|.|.|.+++ |||.+.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++++++++|++.++ ..
T Consensus 25 r~v~l~k~~~~-~G~~l~~------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~-~~ 95 (109)
T 2vsv_A 25 RSIRFTAEEGD-LGFTLRG------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE-DE 95 (109)
T ss_dssp EEEEECCGGGC-CCEEEES------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT-SC
T ss_pred EEEEEEeCCCc-eeEEEeC------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-Ce
Confidence 35888886555 9999963 2357899999999999999 99999999999999999999999999998875 35
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|+|+|.|..+.
T Consensus 96 v~l~V~~~~~~ 106 (109)
T 2vsv_A 96 IEMKVVSLLDE 106 (109)
T ss_dssp EEEEEESCC--
T ss_pred EEEEEEECCCc
Confidence 89999876543
No 141
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.30 E-value=1.8e-11 Score=99.53 Aligned_cols=77 Identities=27% Similarity=0.448 Sum_probs=66.7
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|...+ |||++.+. .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++. + ..|
T Consensus 11 ~v~l~~~~~~-~G~~l~~~------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-g--~~v 79 (93)
T 2dls_A 11 CVIIQKDQHG-FGFTVSGD------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS-G--AYV 79 (93)
T ss_dssp EEEEECSSSS-CCEEEECS------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS-S--SEE
T ss_pred EEEEEeCCCc-eeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-C--CEE
Confidence 4777877655 99999742 368999999999999999 99999999999999999999999999984 3 489
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 80 ~l~v~R~~ 87 (93)
T 2dls_A 80 ALTLLGSS 87 (93)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99998764
No 142
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.30 E-value=7.2e-12 Score=102.58 Aligned_cols=81 Identities=19% Similarity=0.337 Sum_probs=68.8
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
..++.|.|.|..+++|||++.... ..+++|..|.++|||+++|+|++||+|++|||.++.+++++++..+++..++
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 86 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNE----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKG 86 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECT----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCE
T ss_pred CccEEEEEEeCCCCCeeEEEEeCC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 457899999988899999997521 2479999999999999999999999999999999999999999999998655
Q ss_pred cCCee
Q psy3479 426 TMPTS 430 (518)
Q Consensus 426 ~v~~~ 430 (518)
.+.+.
T Consensus 87 ~v~L~ 91 (97)
T 2ejy_A 87 MISLK 91 (97)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 44433
No 143
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.29 E-value=1.2e-11 Score=101.74 Aligned_cols=84 Identities=21% Similarity=0.309 Sum_probs=68.5
Q ss_pred eEEEEccCCcceeEEEEecCC--cC---CCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy3479 65 EVVVPKAKGEILGVVIVESGW--GS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSK 139 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~--~~---~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~ 139 (518)
.|.|.|. +.+|||++..... +. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..+
T Consensus 5 ~v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 82 (99)
T 3khf_A 5 PIVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSG 82 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CEEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4777775 4459999986432 11 11267899999999999999 9999999999999999999999999999776
Q ss_pred CCcEEEEEEEeCC
Q psy3479 140 NQTVVKLTVVPCA 152 (518)
Q Consensus 140 ~~~~v~l~v~~~~ 152 (518)
..|.|+|.|..
T Consensus 83 --~~v~l~v~r~~ 93 (99)
T 3khf_A 83 --NKISLRTTALE 93 (99)
T ss_dssp --SEEEEEEECSC
T ss_pred --CEEEEEEEECC
Confidence 48999998753
No 144
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.29 E-value=1.9e-11 Score=99.82 Aligned_cols=83 Identities=28% Similarity=0.350 Sum_probs=70.7
Q ss_pred cEEEEEeCC-CCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~-~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|. .+.+|||++.+ +....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..+..
T Consensus 4 ~~~v~l~k~~~~~~lG~~~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 80 (95)
T 2vwr_A 4 ILQVALHKRDSGEQLGIKLVR---RTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGER 80 (95)
T ss_dssp EEEEEEECSSTTCCCCEEEEE---CSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEEECCCCCcccEEEEe---ccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 457999985 45789999986 33356899999999999999999999999999999999999999999999887776
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 81 v~l~v~R 87 (95)
T 2vwr_A 81 VNLTIAR 87 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 6655554
No 145
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.29 E-value=6.1e-12 Score=107.48 Aligned_cols=88 Identities=22% Similarity=0.282 Sum_probs=68.1
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCC-CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~-g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
...++|.|.|...++|||+|.++.. .....+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+++..+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4468999999777799999987211 001237999999999999999449999999999999999999999999999988
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
+.+.+.+.|
T Consensus 103 ~~v~l~v~r 111 (120)
T 2iwo_A 103 GSIEMQVVA 111 (120)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEE
Confidence 776555544
No 146
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=2.8e-11 Score=99.06 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=67.4
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
...+.|.|..++ |||+|.... .+++|..|.++ |+++| |++||+|++|||+++.+++|++++++|+..+.+.
T Consensus 11 ~~~v~l~~~~~g-~G~~i~~~~-----~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 81 (96)
T 1ujv_A 11 LMTLTIVKGAQG-FGFTIADSP-----TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGS 81 (96)
T ss_dssp CEEEEEECCSSS-SSEEEEEET-----TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTS
T ss_pred EEEEEEEeCCCc-eeEEEEcCC-----CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 345888987765 999997433 37899999983 66777 9999999999999999999999999999975346
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|+|+|.|..
T Consensus 82 ~v~l~v~R~g 91 (96)
T 1ujv_A 82 ETSLIIHRGS 91 (96)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEEECC
Confidence 8999998753
No 147
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.29 E-value=1.8e-11 Score=99.09 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=67.6
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.+.+ +++|||++.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+..+ ..|
T Consensus 6 ~v~~~~--~~~~G~~l~~~~~--~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g--~~v 78 (91)
T 2pkt_A 6 QIDLQG--PGPWGFRLVGGKD--FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCT--DNL 78 (91)
T ss_dssp EEEEES--SSCCSEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS--SEE
T ss_pred EEEECC--CCCCCEEEEccCC--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeE
Confidence 345443 4569999986432 13579999999999999999 9999999999999999999999999999954 589
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 79 ~l~v~R~g 86 (91)
T 2pkt_A 79 TLTVARSE 86 (91)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 99998753
No 148
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=101.01 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=71.1
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+|.|.|.+.+.|||++..... ...+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+++.. ..|
T Consensus 13 ~v~l~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~---~~v 86 (100)
T 2eeh_A 13 SVRVEKSPAGRLGFSVRGGSE--HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTSS---SRL 86 (100)
T ss_dssp CEEECCCSSSSCSEEEECCTT--TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHSC---SSE
T ss_pred EEEEEECCCCCccEEEEcccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcCC---CEE
Confidence 488999888789999986432 23589999999999999999 999999999999999999999999999983 378
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
.|+|.|..
T Consensus 87 ~l~v~R~g 94 (100)
T 2eeh_A 87 HMMVRRMG 94 (100)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
Confidence 99988753
No 149
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.1e-11 Score=99.74 Aligned_cols=79 Identities=20% Similarity=0.380 Sum_probs=66.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhh-cCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~-~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.|.|+|.|..+.+|||++.+.. ..+++|..|.++|||++ +| |++||+|++|||.++.+++|+++..+++...+.
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~----~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE----LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC----GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred eEEEEEEeCCCCceeEEEEeCC----CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 3689999977789999998521 23699999999999999 56 999999999999999999999999999987664
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 77 v~l~v 81 (88)
T 1kwa_A 77 ITFKI 81 (88)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44333
No 150
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=4.3e-12 Score=105.31 Aligned_cols=68 Identities=31% Similarity=0.502 Sum_probs=59.6
Q ss_pred CCCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 446 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 446 ~~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
++...+|||.|. ++.+...+.++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+++
T Consensus 13 ~k~~~glG~~i~-gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 13 KKSAATLGIAIE-GGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp ECCSSSCCEEEE-CBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred EcCCCcCCeEEE-CCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 455689999998 55444445569999999999999999999999999999999999999999999985
No 151
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.28 E-value=1.3e-11 Score=114.48 Aligned_cols=84 Identities=24% Similarity=0.321 Sum_probs=74.0
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.+|.|.|..+++|||++.++.. ...+++|..|.+||||+++| |++||+|++|||.++.++++.+++.+|+. + ..
T Consensus 86 ~~v~l~k~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~--~~ 159 (192)
T 3k1r_A 86 KEVRLDRLHPEGLGLSVRGGLE--FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-E--KT 159 (192)
T ss_dssp EEEEEETTSTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-S--SE
T ss_pred EEEEEEeCCCCceeEEEEcccc--cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-C--Ce
Confidence 3699999978789999986432 24579999999999999999 99999999999999999999999999999 4 48
Q ss_pred EEEEEEeCCc
Q psy3479 144 VKLTVVPCAP 153 (518)
Q Consensus 144 v~l~v~~~~~ 153 (518)
|.|+|.|...
T Consensus 160 v~l~v~r~g~ 169 (192)
T 3k1r_A 160 VSIKVRHIGL 169 (192)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEECCc
Confidence 9999988754
No 152
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=3.8e-11 Score=100.86 Aligned_cols=84 Identities=25% Similarity=0.419 Sum_probs=70.8
Q ss_pred eEEEEccCCcceeEEEEecCC----cCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 65 EVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~----~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
.+.+.|..++ |||+|.++.. .....+++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++..+
T Consensus 18 ~~~l~~~~~g-lG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 94 (110)
T 1x5q_A 18 TLTILRQTGG-LGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAG- 94 (110)
T ss_dssp EEEEECSSSS-CSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCC-
T ss_pred EEEEecCCCe-eeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCC-
Confidence 4777887555 9999986432 1124689999999999999999 9999999999999999999999999999866
Q ss_pred CcEEEEEEEeCC
Q psy3479 141 QTVVKLTVVPCA 152 (518)
Q Consensus 141 ~~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 95 -~~v~l~v~R~g 105 (110)
T 1x5q_A 95 -TAVQMRVWRES 105 (110)
T ss_dssp -SEEEEEEEECS
T ss_pred -CeEEEEEEECC
Confidence 48999998753
No 153
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.28 E-value=1.6e-11 Score=99.58 Aligned_cols=83 Identities=25% Similarity=0.318 Sum_probs=70.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.++|.|.|..+.+|||++.+ +....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+..+
T Consensus 5 ~~~v~l~k~~~~~lG~~~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 81 (92)
T 2qg1_A 5 TLTIGLQKKPGKGLGLSIVG---KRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTV 81 (92)
T ss_dssp EEEEEEECCTTSCCSEEEEC---CSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred EEEEEEEeCCCCcccEEEEe---ccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35899999777899999986 223458999999999999999999999999999999999999999999998877665
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 82 ~l~v~R 87 (92)
T 2qg1_A 82 TLEVGR 87 (92)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 555443
No 154
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.27 E-value=1.7e-11 Score=99.61 Aligned_cols=82 Identities=21% Similarity=0.314 Sum_probs=70.1
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|. +.+|||++.++ ....+++|..|.++|||+++|+|++||+|++|||.++.+++|+++..+++...+.
T Consensus 4 ~~r~v~l~k~-~~~lG~~i~~~---~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (93)
T 3o46_A 4 SVKIIRLVKN-REPLGATIKKD---EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGA 79 (93)
T ss_dssp CCEEEEEEES-SSCCCEEEEEC---TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEE
T ss_pred cEEEEEEEeC-CCCccEEEEec---CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4578999995 56999999873 2234799999999999999999999999999999999999999999999987776
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.+.
T Consensus 80 v~l~v~ 85 (93)
T 3o46_A 80 ITFKII 85 (93)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555544
No 155
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=7.9e-12 Score=105.52 Aligned_cols=84 Identities=23% Similarity=0.303 Sum_probs=72.5
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|.|.|... +|||+|.+... ..+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+++..+ .
T Consensus 16 ~~~v~l~k~~~-glG~~l~~~~~---~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~--~ 89 (113)
T 1um7_A 16 PRKIILHKGST-GLGFNIVGGED---GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG--Q 89 (113)
T ss_dssp EEEEEEECCSS-CSSBCCBCCST---TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC--S
T ss_pred eEEEEEEECCC-cccEEEEeccC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--C
Confidence 34688988764 59999985432 467899999999999999999999999999999999999999999999876 4
Q ss_pred EEEEEEEeCC
Q psy3479 143 VVKLTVVPCA 152 (518)
Q Consensus 143 ~v~l~v~~~~ 152 (518)
.|.|+|.|.+
T Consensus 90 ~v~l~v~r~~ 99 (113)
T 1um7_A 90 SVTIVAQYRP 99 (113)
T ss_dssp EEEEEEECCH
T ss_pred cEEEEEEECc
Confidence 8999988764
No 156
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=99.55 Aligned_cols=85 Identities=16% Similarity=0.278 Sum_probs=70.5
Q ss_pred ccceeEEEEccCCc--ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy3479 61 FESDEVVVPKAKGE--ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS 138 (518)
Q Consensus 61 f~s~~v~l~k~~~~--~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~ 138 (518)
|....+.+.+.++. .|||++... ..+++|..|.|+|||+++| |++||+|++|||+.+.+.++.++.++|+..
T Consensus 2 ~~~~~~~~~~~~~~~~~lG~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 75 (90)
T 2eaq_A 2 FSDMRISINQTPGKSLDFGFTIKWD-----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKA 75 (90)
T ss_dssp EEEEEEEEECCTTCSSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCCcccEEEEec-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 44456778877765 799999743 3479999999999999999 999999999999999999999999999864
Q ss_pred CCCcEEEEEEEeC
Q psy3479 139 KNQTVVKLTVVPC 151 (518)
Q Consensus 139 ~~~~~v~l~v~~~ 151 (518)
..+..|.|+|.|.
T Consensus 76 ~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 76 QETGHLVMDVRRY 88 (90)
T ss_dssp HHHTEEEEEEEEE
T ss_pred CCCCEEEEEEEeC
Confidence 2235899998763
No 157
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.27 E-value=2.1e-11 Score=98.46 Aligned_cols=83 Identities=25% Similarity=0.274 Sum_probs=70.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|..+.+|||++.+ +.. ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++..+++..+..
T Consensus 5 ~~~v~l~k~~~~~lG~~i~~---~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~ 81 (90)
T 1qav_A 5 RRRVTVRKADAGGLGISIKG---GRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 81 (90)
T ss_dssp CEEEEEECCTTTCCCEEEEE---EGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred cEEEEEEeCCCCCcCEEEEc---ccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 57899999778899999986 222 24799999999999999933999999999999999999999999999987776
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 82 v~l~v~r 88 (90)
T 1qav_A 82 VVLEVKY 88 (90)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665554
No 158
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=7.1e-12 Score=102.18 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=70.3
Q ss_pred EEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEE
Q psy3479 66 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVK 145 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~ 145 (518)
+.+.+..+.+|||++.++.. ...+++|..|.+++||+++| |++||+|++|||+.+.+++|.++.++|+..+ ..|+
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~ 82 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRD--FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA--SPLR 82 (94)
T ss_dssp EEEEECSSSCCSBCCEEETT--TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SSEE
T ss_pred EEEEecCCCCccEEEecccC--CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CcEE
Confidence 56666666779999986442 24579999999999999999 9999999999999999999999999999987 4788
Q ss_pred EEEEeCC
Q psy3479 146 LTVVPCA 152 (518)
Q Consensus 146 l~v~~~~ 152 (518)
|+|.|..
T Consensus 83 l~v~R~g 89 (94)
T 1vb7_A 83 LQLDRSS 89 (94)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 9888753
No 159
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.27 E-value=2.3e-11 Score=102.92 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=74.1
Q ss_pred cceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy3479 62 ESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQ 141 (518)
Q Consensus 62 ~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~ 141 (518)
.++.+.+.+...+.|||.+..... ..+++|..|.++|||+++| |++||+|++|||+.+.++++.+++++|+..+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-- 86 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD---TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG-- 86 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT---CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTC--
T ss_pred CCEEEEEeCCCCCcccEEEEEecC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 455688999888889999985332 4578999999999999999 9999999999999999999999999999875
Q ss_pred cEEEEEEEeCC
Q psy3479 142 TVVKLTVVPCA 152 (518)
Q Consensus 142 ~~v~l~v~~~~ 152 (518)
..|+|+|.|..
T Consensus 87 ~~v~l~v~R~~ 97 (114)
T 2edz_A 87 NSVTLLVLDGD 97 (114)
T ss_dssp SEEEEEEECHH
T ss_pred CEEEEEEEECC
Confidence 58999998753
No 160
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.26 E-value=2.2e-11 Score=97.68 Aligned_cols=81 Identities=27% Similarity=0.360 Sum_probs=67.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhh-cCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~-~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|....+|||++.++.. ...+++|..|.++|||++ +| |++||+|++|||.++.++++.++..+++.++..
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGG--GTEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEEECCCCcccEEEEccCC--CCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46899999778899999986211 123689999999999999 57 999999999999999999999999999987776
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 80 v~l~v 84 (87)
T 4e34_A 80 IEFEV 84 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55444
No 161
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.26 E-value=2e-11 Score=101.36 Aligned_cols=85 Identities=28% Similarity=0.437 Sum_probs=71.9
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcC-CcEEEEEecCCChhhhc-CCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSML-PTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~-~g~~I~~V~~~s~A~~~-G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
...+.|.|.|..+.+|||+|.+ +... .+++|..|.++|||+++ | |++||+|++|||.++.++++.++..+++.+
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~---g~~~~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITG---GKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEE---EGGGTEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCCCccCEEEEe---ccCCCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3457899999878899999986 2222 37899999999999996 7 999999999999999999999999999998
Q ss_pred cCcCCeeEEEe
Q psy3479 424 MKTMPTSMFRL 434 (518)
Q Consensus 424 ~~~v~~~v~r~ 434 (518)
++.+.+.+.+.
T Consensus 84 ~~~v~l~v~~~ 94 (103)
T 2dc2_A 84 RGEIEFEVVYV 94 (103)
T ss_dssp CSEEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 88766666553
No 162
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=2.6e-11 Score=101.69 Aligned_cols=76 Identities=25% Similarity=0.377 Sum_probs=65.4
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
..+.|.|.|. .+|||+|.++......++++|..|.+++||+++|+|++||+|++|||+++.+++|++++.+|+.+.
T Consensus 15 ~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 15 AFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp TEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred cEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 3568888884 689999997432223347999999999999999999999999999999999999999999999876
No 163
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=6.5e-12 Score=103.67 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=71.1
Q ss_pred ccceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 61 FESDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 61 f~s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
|+...+.+.+...+ |||.+... .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++++|+..++
T Consensus 14 ~~~~~v~l~~~~~g-~G~~~~~~------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 85 (100)
T 1whd_A 14 GEKLQITIRRGKDG-FGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPS 85 (100)
T ss_dssp CEEEEEEEECCSSS-SSCBCCCS------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSS
T ss_pred cceEEEEEECCCCe-eeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 44556888887765 99998642 358999999999999999 99999999999999999999999999999874
Q ss_pred CcEEEEEEEeCCc
Q psy3479 141 QTVVKLTVVPCAP 153 (518)
Q Consensus 141 ~~~v~l~v~~~~~ 153 (518)
.|+|+|.|..+
T Consensus 86 --~v~l~v~R~~~ 96 (100)
T 1whd_A 86 --EIILLVWRVSG 96 (100)
T ss_dssp --EEEEEEEECCS
T ss_pred --eEEEEEEECCC
Confidence 69999988643
No 164
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=99.77 Aligned_cols=82 Identities=23% Similarity=0.215 Sum_probs=67.8
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
.+.|+|.+ + .+|||.+.++.. ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++..+ .
T Consensus 9 ~~~v~l~~-~-~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g--~ 81 (94)
T 2eeg_A 9 PHSVTLRG-P-SPWGFRLVGGRD--FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCH--D 81 (94)
T ss_dssp CEEEEECC-S-SCCSCCEECCTT--TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCC--S
T ss_pred eEEEEEeC-C-CccCEEEECccC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--C
Confidence 34577733 3 469999986432 24568999999999999999 9999999999999999999999999999866 3
Q ss_pred EEEEEEEeC
Q psy3479 143 VVKLTVVPC 151 (518)
Q Consensus 143 ~v~l~v~~~ 151 (518)
.|.|+|.|.
T Consensus 82 ~v~l~v~R~ 90 (94)
T 2eeg_A 82 HLTLSVSSG 90 (94)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEEeC
Confidence 788888764
No 165
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.24 E-value=2.8e-11 Score=105.16 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=71.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----------cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQ 417 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----------~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~ 417 (518)
.+.|+|.|...++|||+|.++.... ...|++|..|.++|||+++| |+.||+|++|||.++.++++.+++
T Consensus 28 ~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~ 106 (132)
T 3l4f_D 28 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 106 (132)
T ss_dssp CCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHH
T ss_pred CEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 4689999977789999999743211 11279999999999999999 999999999999999999999999
Q ss_pred HHHHHhcCcCCeeEEE
Q psy3479 418 TYIKILMKTMPTSMFR 433 (518)
Q Consensus 418 ~~l~~~~~~v~~~v~r 433 (518)
.+++..+..+.+.+.+
T Consensus 107 ~~l~~~g~~v~l~v~~ 122 (132)
T 3l4f_D 107 NMIRQGGNTLMVKVVM 122 (132)
T ss_dssp HHHHHTTTEEEEEEEC
T ss_pred HHHHcCCCEEEEEEEE
Confidence 9999887776666554
No 166
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.24 E-value=4.6e-11 Score=102.58 Aligned_cols=78 Identities=21% Similarity=0.298 Sum_probs=66.7
Q ss_pred cCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEe
Q psy3479 71 AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVP 150 (518)
Q Consensus 71 ~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~ 150 (518)
.+++.|||.+.++. ..+++|..|.|+|||+++| |++||+|++|||+.+.++++++++.+|++...+..|+|+|.|
T Consensus 36 ~~~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 110 (124)
T 3tsv_A 36 RKGDSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQK 110 (124)
T ss_dssp ECSSCCCEEEEECT----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCceeEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 34567999998643 3589999999999999999 999999999999999999999999999864444689999987
Q ss_pred CCc
Q psy3479 151 CAP 153 (518)
Q Consensus 151 ~~~ 153 (518)
.+.
T Consensus 111 ~~~ 113 (124)
T 3tsv_A 111 KKD 113 (124)
T ss_dssp CHH
T ss_pred CCc
Confidence 643
No 167
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.24 E-value=3.6e-11 Score=97.25 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=64.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
++.|.|.|. ..+|||++.+ +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++...+.
T Consensus 4 ~r~v~l~r~-~~g~G~~~~~---~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 4 PRLCCLEKG-PNGYGFHLHG---EKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CEEEEEECB-TTBCCEEEEE---CTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred cEEEEEEeC-CCcccEEEEe---cCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 578999996 4689999987 2234589999999999999999 999999999999999999999999999877654
No 168
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.24 E-value=3.5e-11 Score=98.74 Aligned_cols=88 Identities=23% Similarity=0.349 Sum_probs=71.7
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCC----CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHH
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 421 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g----~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~ 421 (518)
+..++|+|.|....+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 34578999997778999999862211 11237999999999999999999999999999999999999999999998
Q ss_pred HhcCcCCeeEEE
Q psy3479 422 ILMKTMPTSMFR 433 (518)
Q Consensus 422 ~~~~~v~~~v~r 433 (518)
..+..+.+.+.|
T Consensus 84 ~~g~~v~l~v~R 95 (98)
T 1ihj_A 84 EADFKIELEIQT 95 (98)
T ss_dssp HSCSEEEEEEEE
T ss_pred cCCCeEEEEEEe
Confidence 866665555544
No 169
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.24 E-value=3.4e-11 Score=97.23 Aligned_cols=80 Identities=24% Similarity=0.289 Sum_probs=67.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|.|.|. ..+|||++.+. ....+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++..+..+
T Consensus 5 ~r~v~l~k~-~~g~G~~~~~~---~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 79 (90)
T 2he4_A 5 PRLCHLRKG-PQGYGFNLHSD---KSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEA 79 (90)
T ss_dssp CEEEEEECB-TTBCCEEEEEC---SSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEE
T ss_pred cEEEEEEEC-CCCccEEEEcc---CCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 578999995 46899999862 234589999999999999999 9999999999999999999999999998775555
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 80 ~l~v~ 84 (90)
T 2he4_A 80 RLLVV 84 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 170
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.24 E-value=3.1e-11 Score=100.50 Aligned_cols=86 Identities=24% Similarity=0.261 Sum_probs=69.8
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
..++|.|.|.. .+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45689999964 6899999973211 1124899999999999999999999999999999999999999999999877
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 82 ~~~v~l~v~R 91 (105)
T 2awx_A 82 SDFVYLKVAK 91 (105)
T ss_dssp CSEEEEEEEC
T ss_pred CCeEEEEEEc
Confidence 6655555443
No 171
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.23 E-value=6.1e-11 Score=102.41 Aligned_cols=83 Identities=22% Similarity=0.267 Sum_probs=71.4
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|.|.|...+ |||++..... ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+... +..
T Consensus 11 r~v~l~~~~~g-~G~~l~~~~~---~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~~ 84 (128)
T 2kjd_A 11 RLCTMKKGPSG-YGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG-DET 84 (128)
T ss_dssp EEEEEECCSSS-CCEEEEECSS---SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTC-SEE
T ss_pred EEEEEecCCCc-ccEEEEecCC---CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCE
Confidence 45788887765 9999986543 4589999999999999999 9999999999999999999999999999985 367
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
+.|+|.|..
T Consensus 85 ~~l~v~R~g 93 (128)
T 2kjd_A 85 KLLVVDRET 93 (128)
T ss_dssp EEEEECHHH
T ss_pred EEEEEEeCC
Confidence 778887653
No 172
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.23 E-value=5.2e-11 Score=96.30 Aligned_cols=81 Identities=22% Similarity=0.278 Sum_probs=67.2
Q ss_pred cEEEEEeCCCC-CceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKG-EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~-~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|..+ .+|||++.+ +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..
T Consensus 7 ~~~v~l~k~~~~~~~G~~~~~---~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 82 (91)
T 1m5z_A 7 LHKVTLYKDSGMEDFGFSVAD---GLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNK 82 (91)
T ss_dssp EEEEEEECCTTCSSSSEEEEE---CTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSTTE
T ss_pred eEEEEEEECCCCCCccEEEEe---ccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 46889998654 689999987 3334589999999999999999 999999999999999999888888888876665
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.+.
T Consensus 83 v~l~v~ 88 (91)
T 1m5z_A 83 LDLVIS 88 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 544443
No 173
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.23 E-value=1.4e-12 Score=136.55 Aligned_cols=131 Identities=18% Similarity=0.305 Sum_probs=46.4
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCcCCeeEEEeeeecccceeccCC-----
Q psy3479 375 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKTMPTSMFRLLTGQETPVVVPKA----- 447 (518)
Q Consensus 375 ~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~v~~~v~r~~~~~~~~~~~~~~----- 447 (518)
.|++|..|.++|||+++| |+.||+|++|||+.+.+ +.+...++.. .+..+.+.+.|-.......+.+...
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~ 362 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISS--FAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQV 362 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCS--SHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccc
Confidence 489999999999999999 99999999999999995 4666666653 3455556554421111111111110
Q ss_pred -----CCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 448 -----KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 448 -----~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
....+|+.+... ....+++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|+..
T Consensus 363 ~~~~~~~~~~G~~l~~~---~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~ 428 (448)
T 1ky9_A 363 DSSSIFNGIEGAEMSNK---GKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSK 428 (448)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ccccccccccceEeecc---CCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcC
Confidence 012246666421 123468999999999999999 99999999999999974 58888888764
No 174
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.23 E-value=5.3e-11 Score=98.28 Aligned_cols=86 Identities=22% Similarity=0.247 Sum_probs=70.0
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCC---cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~---~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
..++|+|.|. ..+|||++.++.... ...+++|..|.++|||+++|+|+.||+|++|||.++.++++.++..+++..
T Consensus 7 ~~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRG-PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECC-TTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeC-CCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3578999995 489999999732111 134899999999999999999999999999999999999999999998877
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 86 g~~v~l~v~R 95 (101)
T 2jik_A 86 GYAVSLRVQH 95 (101)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 6655555544
No 175
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=2.2e-11 Score=101.04 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=69.6
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.+|.|. .+.+|||+|.++.. ...+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+++..+ ..
T Consensus 7 ~~v~l~--~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g--~~ 79 (103)
T 1wf7_A 7 GSVSLV--GPAPWGFRLQGGKD--FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACT--GS 79 (103)
T ss_dssp EEEEEE--SSSCCSCCEEEETT--TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCS--SE
T ss_pred EEEEEe--CCCccCEEEecccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--Ce
Confidence 356666 34569999986542 13358999999999999999 9999999999999999999999999999886 48
Q ss_pred EEEEEEeCCce
Q psy3479 144 VKLTVVPCAPV 154 (518)
Q Consensus 144 v~l~v~~~~~~ 154 (518)
|.|+|.|....
T Consensus 80 v~l~v~R~g~~ 90 (103)
T 1wf7_A 80 LNMTLQRASAA 90 (103)
T ss_dssp EEEEECCCSCC
T ss_pred EEEEEEeCCCc
Confidence 99999876543
No 176
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=4.4e-11 Score=101.65 Aligned_cols=87 Identities=20% Similarity=0.216 Sum_probs=71.3
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
+..++|.|.|.. .+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++.
T Consensus 23 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 23 MTVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 335788998864 8999999973211 123479999999999999999999999999999999999999999999998
Q ss_pred hcCcCCeeEEE
Q psy3479 423 LMKTMPTSMFR 433 (518)
Q Consensus 423 ~~~~v~~~v~r 433 (518)
.+..+.+.+.|
T Consensus 102 ~g~~v~l~v~R 112 (117)
T 2byg_A 102 TSEVVYLKVGK 112 (117)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 77666665554
No 177
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.22 E-value=5.6e-11 Score=98.34 Aligned_cols=85 Identities=25% Similarity=0.270 Sum_probs=70.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC---CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW---GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~---g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
.++|.|.|. ..+|||++.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+
T Consensus 5 ~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 5 YEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp EEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 468999995 6789999997321 112458999999999999999999999999999999999999999999998877
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 84 ~~v~l~v~R 92 (102)
T 2i1n_A 84 PVVRLVVRR 92 (102)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 766555544
No 178
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=4.7e-11 Score=96.40 Aligned_cols=73 Identities=26% Similarity=0.474 Sum_probs=62.2
Q ss_pred EEEEc-cCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 66 VVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 66 v~l~k-~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+++.+ ...+.|||.+.+ + +|.+|.++|||+++| |++||+|++|||+++.++++.+++++|+..+ ..|
T Consensus 15 ~~i~~~~~~~~lG~~~~~--------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g--~~v 82 (90)
T 1y7n_A 15 VLIRRPDLRYQLGFSVQN--------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAV--GEI 82 (90)
T ss_dssp EEEEESSTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCC--EEE
T ss_pred EEEEeCCCccccCeEecC--------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeE
Confidence 44444 334679999852 2 899999999999999 9999999999999999999999999999876 589
Q ss_pred EEEEEe
Q psy3479 145 KLTVVP 150 (518)
Q Consensus 145 ~l~v~~ 150 (518)
.|+|.+
T Consensus 83 ~l~v~p 88 (90)
T 1y7n_A 83 HMKTMP 88 (90)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998875
No 179
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.22 E-value=5.2e-11 Score=97.42 Aligned_cols=83 Identities=22% Similarity=0.288 Sum_probs=67.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC----CCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW----GSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~----g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
+++|.|.|...++|||+|.+.+. +.. ..+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++.
T Consensus 5 ~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 5 RKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp EEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 57899999877899999985110 111 2378999999999999999 99999999999999999999999999998
Q ss_pred hcCcCCeeE
Q psy3479 423 LMKTMPTSM 431 (518)
Q Consensus 423 ~~~~v~~~v 431 (518)
.++.+.+.+
T Consensus 84 ~~~~v~l~v 92 (96)
T 2ego_A 84 SGNVLRLET 92 (96)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 766544443
No 180
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.22 E-value=6.4e-11 Score=101.86 Aligned_cols=85 Identities=22% Similarity=0.293 Sum_probs=73.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.++|.|.|...++|||++.++.. ..++++|..|.++|||+++|+|+.||+|++|||.++.+++|+++..+++..++.+
T Consensus 20 ~~~v~l~k~~~~~lG~~i~gg~~--~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v 97 (125)
T 3hpk_A 20 PGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 97 (125)
T ss_dssp EEEEEEECCTTSCCCEEEEECSS--CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CeEEEEEeCCCCCcCEEEeccCC--CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 47899999878899999997322 2357999999999999999999999999999999999999999999999988876
Q ss_pred CeeEEEe
Q psy3479 428 PTSMFRL 434 (518)
Q Consensus 428 ~~~v~r~ 434 (518)
.+.+.|.
T Consensus 98 ~l~v~r~ 104 (125)
T 3hpk_A 98 TIHYNKL 104 (125)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 6666553
No 181
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.22 E-value=5.2e-11 Score=98.87 Aligned_cols=83 Identities=27% Similarity=0.322 Sum_probs=70.1
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.|.|.|. +.+|||++.+ +....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..+..
T Consensus 11 ~~~~v~l~k~-~~glG~~~~~---~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 11 EPRRIVIHRG-STGLGFNIVG---GEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp SCEEEEEECB-TTBTSEEEEE---CC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred ccEEEEEEeC-CCccCEEEEC---CCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3578999995 6689999987 33345899999999999999999999999999999999999999999999887766
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 87 v~l~v~r 93 (104)
T 3i4w_A 87 VTIIAQY 93 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555544
No 182
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=3.1e-11 Score=97.74 Aligned_cols=82 Identities=27% Similarity=0.334 Sum_probs=69.9
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
+.++.|.|.|..+.+|||++.+. ..+++|..|.++|||+++|.|++||+|++|||.++ +.+++++..+++..++
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~~-----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~ 78 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRVE-----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASG 78 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEES-----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCS
T ss_pred CCcEEEEEEECCCCcEeEEEEec-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCC
Confidence 34577889887788999999862 34799999999999999887999999999999999 8899999999998777
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.+
T Consensus 79 ~v~l~v~~ 86 (91)
T 2e7k_A 79 SVILKILS 86 (91)
T ss_dssp SBCEEEEC
T ss_pred eEEEEEEE
Confidence 66666544
No 183
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.21 E-value=6.6e-11 Score=96.30 Aligned_cols=83 Identities=24% Similarity=0.257 Sum_probs=67.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
.++|+|.|. ..+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+
T Consensus 4 ~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 4 IMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp EEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 468999995 67899999973211 12348999999999999999999999999999999999999999998888776
Q ss_pred CcCCeeE
Q psy3479 425 KTMPTSM 431 (518)
Q Consensus 425 ~~v~~~v 431 (518)
..+.+.+
T Consensus 83 ~~v~l~v 89 (94)
T 2fe5_A 83 DMVYLKV 89 (94)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 6544444
No 184
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2e-11 Score=100.69 Aligned_cols=83 Identities=23% Similarity=0.286 Sum_probs=67.7
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.+.+.+....+|||++.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++ +.+++.+++..+ ..|
T Consensus 12 ~~~v~~~~~~~~G~~~~gg~~--~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~--~~v 86 (100)
T 2edp_A 12 YVPVQLQGGAPWGFTLKGGLE--HCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSF--RIL 86 (100)
T ss_dssp EEEEECCSCSCCCCCEEEEGG--GTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCC--SSC
T ss_pred EEEEEECCCCCcCEEEeccCC--CCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCC--CeE
Confidence 455555555679999986432 134689999999999999944999999999999999997 999999999876 478
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 87 ~l~v~R~~ 94 (100)
T 2edp_A 87 KLIVRRRN 94 (100)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 88888764
No 185
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.6e-11 Score=102.37 Aligned_cols=86 Identities=16% Similarity=0.290 Sum_probs=71.7
Q ss_pred ceeEEEEccCCc--ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy3479 63 SDEVVVPKAKGE--ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKN 140 (518)
Q Consensus 63 s~~v~l~k~~~~--~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~ 140 (518)
.+.|.|.|.... +|||+|..... ....+++|..|.++|||+++| |++||+|++|||+.+..+++.+++++|++.
T Consensus 16 ~~~v~l~k~~~~~~~~G~~v~~~~~-~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-- 91 (114)
T 2d8i_A 16 TQSIHIEKSDTAADTYGFSLSSVEE-DGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP-- 91 (114)
T ss_dssp EEEEEEECSCTTTCCCCCEEEEEEE-TTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS--
T ss_pred eEEEEEEeCCCCccccCEEEEecCc-CCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC--
Confidence 347889988763 69999986221 112579999999999999999 999999999999999999999999999853
Q ss_pred CcEEEEEEEeCCce
Q psy3479 141 QTVVKLTVVPCAPV 154 (518)
Q Consensus 141 ~~~v~l~v~~~~~~ 154 (518)
.+.|+|.|.+..
T Consensus 92 --~v~l~v~R~p~~ 103 (114)
T 2d8i_A 92 --SLGLLVRTYPEL 103 (114)
T ss_dssp --EEEEEEEECCCS
T ss_pred --cEEEEEEECCCC
Confidence 789999887644
No 186
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.21 E-value=7.1e-11 Score=95.29 Aligned_cols=83 Identities=19% Similarity=0.330 Sum_probs=68.2
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC--
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK-- 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~-- 425 (518)
.++|.|.|. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++....
T Consensus 3 ~~~v~l~~~-~~g~G~~~~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 79 (90)
T 2q9v_A 3 EQDIFLWRK-ETGFGFRILGGNE--PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQG 79 (90)
T ss_dssp EEEEEEECB-TTBCCEEEEECSS--TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEC-CCccCEEEEcccc--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 357899995 4789999987321 12359999999999999999999999999999999999999999999988754
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 80 ~v~l~v~R 87 (90)
T 2q9v_A 80 HVNLTVRQ 87 (90)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 55555544
No 187
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.84 E-value=1.3e-12 Score=110.19 Aligned_cols=81 Identities=31% Similarity=0.490 Sum_probs=69.0
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.|.|..+++|||++.++.. ...+++|..|.++|||++++.|++||+|++|||+++.++++.+++.+|++.++ .|
T Consensus 30 ~v~l~k~~~~glG~~l~~g~~--~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~--~v 105 (112)
T 2lob_A 30 KVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG--EI 105 (112)
Confidence 588889888889999985432 13478999999999999943499999999999999999999999999998875 58
Q ss_pred EEEEE
Q psy3479 145 KLTVV 149 (518)
Q Consensus 145 ~l~v~ 149 (518)
+|+|.
T Consensus 106 ~l~V~ 110 (112)
T 2lob_A 106 EFEVV 110 (112)
Confidence 87775
No 188
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.21 E-value=9.7e-11 Score=98.16 Aligned_cols=86 Identities=23% Similarity=0.314 Sum_probs=70.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----------cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQ 417 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----------~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~ 417 (518)
.+.|.|.|...++|||+|.++.... ...|++|..|.++|||+++| |+.||+|++|||.++.++++.++.
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred cEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 4689998877889999998732211 01279999999999999999 999999999999999999999999
Q ss_pred HHHHHhcCcCCeeEEEe
Q psy3479 418 TYIKILMKTMPTSMFRL 434 (518)
Q Consensus 418 ~~l~~~~~~v~~~v~r~ 434 (518)
.+++..+..+.+.+.+.
T Consensus 87 ~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHTTTEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEEC
Confidence 99988776666666554
No 189
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=4e-11 Score=101.85 Aligned_cols=86 Identities=28% Similarity=0.311 Sum_probs=70.7
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
.+++|.|.|.. .+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..++
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35789999964 7899999862110 112379999999999999999999999999999999999999999999998777
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 104 ~v~l~v~R 111 (117)
T 2fne_A 104 TVTLMVLS 111 (117)
T ss_dssp SEEEEEEE
T ss_pred eEEEEEEe
Confidence 65555544
No 190
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=4.1e-11 Score=101.79 Aligned_cols=86 Identities=23% Similarity=0.264 Sum_probs=71.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC-------CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW-------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 420 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~-------g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l 420 (518)
++.|.|.|..+.+|||+|.++.. +....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.++
T Consensus 16 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~ 95 (117)
T 2ehr_A 16 PRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAI 95 (117)
T ss_dssp CEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57899999777899999986321 12235899999999999999999999999999999999999999999999
Q ss_pred HHhcCcCCeeEEE
Q psy3479 421 KILMKTMPTSMFR 433 (518)
Q Consensus 421 ~~~~~~v~~~v~r 433 (518)
+..+..+.+.+.|
T Consensus 96 ~~~g~~v~l~v~r 108 (117)
T 2ehr_A 96 KNAGNPVVFIVQS 108 (117)
T ss_dssp HTSCSSEEEEECC
T ss_pred HcCCCeEEEEEEE
Confidence 9877765555544
No 191
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.20 E-value=4.5e-11 Score=97.47 Aligned_cols=81 Identities=21% Similarity=0.262 Sum_probs=67.6
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.+.|.|. ..+|||++.++ ....+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++..++.
T Consensus 5 ~~r~v~l~~~-~~~~G~~l~~~---~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (95)
T 3r68_A 5 QPRVVVIKKG-SNGYGFYLRAG---PEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 79 (95)
T ss_dssp CCEEEEEECB-TTBCSCEEEEC-----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CcEEEEEecC-CCcccEEEEec---CCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4578999994 67899999862 223479999999999999999 999999999999999999999999999987766
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.++
T Consensus 80 ~~~~~~ 85 (95)
T 3r68_A 80 TTLLVL 85 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 544443
No 192
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.20 E-value=2.8e-11 Score=104.45 Aligned_cols=85 Identities=24% Similarity=0.300 Sum_probs=68.2
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC--CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh---
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--- 423 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g--~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--- 423 (518)
.+|.|.|....+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+
T Consensus 27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 106 (127)
T 1wg6_A 27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM 106 (127)
T ss_dssp EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence 45677655678999999862210 0123799999999999999999999999999999999999999999999976
Q ss_pred ----cCcCCeeEEE
Q psy3479 424 ----MKTMPTSMFR 433 (518)
Q Consensus 424 ----~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 107 ~g~~~~~v~l~v~R 120 (127)
T 1wg6_A 107 EGNIRGMIQLVILR 120 (127)
T ss_dssp HHHHTCEEEEEEEE
T ss_pred ccCCCCEEEEEEEe
Confidence 4555555544
No 193
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.20 E-value=3.2e-11 Score=104.08 Aligned_cols=92 Identities=25% Similarity=0.309 Sum_probs=77.3
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.+|+|.|....+|||++..... ..+++|..|.++|||+++|.|++||+|++|||+.+.++++.++.++|+... +..
T Consensus 10 ~~v~l~~~~~~glG~~~~~~~~---~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-g~~ 85 (127)
T 1b8q_A 10 ISVRLFKRKVGGLGFLVKERVS---KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA-SET 85 (127)
T ss_dssp EEEEEECTTTSCCSCCEEECTT---SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCC-SSC
T ss_pred EEEEEEeCCCCcEeEEEEecCC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CCe
Confidence 3688999886779999986542 467999999999999999944999999999999999999999999999864 368
Q ss_pred EEEEEEeCCceeEEEe
Q psy3479 144 VKLTVVPCAPVVEVKI 159 (518)
Q Consensus 144 v~l~v~~~~~~~~~~~ 159 (518)
+.|+|.|......+.+
T Consensus 86 v~l~v~R~g~~~~~~~ 101 (127)
T 1b8q_A 86 HVVLILRGPEGFTTHL 101 (127)
T ss_dssp EEEEEECCCCSEEECC
T ss_pred EEEEEEeCCceEEEEE
Confidence 9999988765544444
No 194
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.19 E-value=4.6e-11 Score=99.97 Aligned_cols=84 Identities=25% Similarity=0.286 Sum_probs=68.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC--CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc-
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW--GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM- 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~--g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~- 424 (518)
.++|.|.|. ..+|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||+++.+++|+++..+++...
T Consensus 16 ~~~v~l~k~-~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 94 (108)
T 2d92_A 16 VKIVELVKD-CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPP 94 (108)
T ss_dssp CEEEEEEEC-SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCS
T ss_pred eEEEEEEEC-CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 578999996 5799999986221 112347999999999999999999999999999999999999999999999864
Q ss_pred CcCCeeEE
Q psy3479 425 KTMPTSMF 432 (518)
Q Consensus 425 ~~v~~~v~ 432 (518)
..+.+.+.
T Consensus 95 ~~v~l~v~ 102 (108)
T 2d92_A 95 GLVHLGIC 102 (108)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 44444443
No 195
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.19 E-value=9.3e-11 Score=95.81 Aligned_cols=83 Identities=24% Similarity=0.313 Sum_probs=68.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|. ..+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..
T Consensus 6 ~~~v~l~k~-~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 84 (96)
T 1d5g_A 6 IFEVELAKN-DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQV 84 (96)
T ss_dssp EEEEEEECS-SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSE
T ss_pred EEEEEEEeC-CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 468999985 67999999863211 1234899999999999999999999999999999999999999999999876555
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 85 v~l~v 89 (96)
T 1d5g_A 85 VHLLL 89 (96)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 196
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.19 E-value=6.5e-11 Score=95.20 Aligned_cols=62 Identities=21% Similarity=0.399 Sum_probs=56.0
Q ss_pred CCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcCC
Q psy3479 447 AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 447 ~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~~ 516 (518)
.....|||.+.. +++|.+|.++|||+++|+|++||+|++|||+++.+++|++++++|+.++.
T Consensus 10 ~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 71 (88)
T 3e17_A 10 RANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG 71 (88)
T ss_dssp TTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT
T ss_pred CCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 445689999862 68999999999999999999999999999999999999999999998764
No 197
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.19 E-value=4.6e-11 Score=103.20 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=71.9
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeecc-CCChHHHHHHHHHhc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-GLPLSTCQTYIKILM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~-~~s~~~~~~~l~~~~ 424 (518)
..+.|.|.|....+|||+|.++... ....+++|..|.+++||+++|+|++||+|++|||+++. ++++.++..+++..+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~ 104 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTT 104 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCC
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC
Confidence 3578999997668999999863211 11238999999999999999999999999999999997 999999999999877
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 105 ~~v~l~v~r 113 (128)
T 2db5_A 105 GSLRLIVAR 113 (128)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEc
Confidence 666555544
No 198
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=3.2e-11 Score=99.66 Aligned_cols=81 Identities=28% Similarity=0.322 Sum_probs=66.1
Q ss_pred eEEEEcc-CCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 65 EVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 65 ~v~l~k~-~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
++.|.|. ...+|||+|.+... ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++... .
T Consensus 11 ~v~l~~~~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~---~ 84 (101)
T 1uez_A 11 LVSLRRAKAHEGLGFSIRGGSE--HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGSK---K 84 (101)
T ss_dssp EECCCCCCTTTCSSEEEEECTT--TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSSS---S
T ss_pred EEEEEECCCCCcccEEEeCCCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCCC---e
Confidence 4666663 34579999986532 13579999999999999999 9999999999999999999999888887654 5
Q ss_pred EEEEEEeC
Q psy3479 144 VKLTVVPC 151 (518)
Q Consensus 144 v~l~v~~~ 151 (518)
|.|+|.|.
T Consensus 85 v~l~v~R~ 92 (101)
T 1uez_A 85 LVLSVYSA 92 (101)
T ss_dssp CCEEECCC
T ss_pred EEEEEEEC
Confidence 77777654
No 199
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.19 E-value=8.6e-11 Score=99.30 Aligned_cols=82 Identities=28% Similarity=0.477 Sum_probs=70.3
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|.+.+....+|||+|.+... ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++... .
T Consensus 17 ~~v~~~~~~~~~lG~~l~~~~~--~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~---~ 90 (114)
T 1x5n_A 17 KKVFISLVGSRGLGCSISSGPI--QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSSR---S 90 (114)
T ss_dssp EEEEECCCSSCCCCEEEEECCS--SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHCS---S
T ss_pred EEEEEEEcCCCceeEEEeecCC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC---e
Confidence 3577777777789999986532 24589999999999999999 9999999999999999999999999999764 6
Q ss_pred EEEEEEeC
Q psy3479 144 VKLTVVPC 151 (518)
Q Consensus 144 v~l~v~~~ 151 (518)
+.|+|.|.
T Consensus 91 v~l~v~r~ 98 (114)
T 1x5n_A 91 LTISIVAA 98 (114)
T ss_dssp EEEEECSS
T ss_pred EEEEEEcC
Confidence 88888765
No 200
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=4.2e-11 Score=101.80 Aligned_cols=86 Identities=23% Similarity=0.279 Sum_probs=69.3
Q ss_pred cEEEEEeCCC------CCceeEEEEeCCC---CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHH
Q psy3479 348 QKEVVVPKAK------GEILGVVIVESGW---GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 418 (518)
Q Consensus 348 ~~~V~L~k~~------~~~lG~~i~~~~~---g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~ 418 (518)
.+.|.|.|.. +.+|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.+++|.++..
T Consensus 13 ~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 92 (117)
T 1ujd_A 13 HARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQS 92 (117)
T ss_dssp EEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred eEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHH
Confidence 4678888865 4789999986221 011237999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcCCeeEEE
Q psy3479 419 YIKILMKTMPTSMFR 433 (518)
Q Consensus 419 ~l~~~~~~v~~~v~r 433 (518)
+++..+..+.+.+.|
T Consensus 93 ~l~~~~~~v~l~v~R 107 (117)
T 1ujd_A 93 IISQQSGEAEICVRL 107 (117)
T ss_dssp HHSCCSSCEEEEEES
T ss_pred HHhcCCCEEEEEEEE
Confidence 998876665555443
No 201
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.2e-10 Score=98.99 Aligned_cols=82 Identities=22% Similarity=0.317 Sum_probs=70.2
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.|.+.|... +|||++.... ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++..+ ..|
T Consensus 22 ~v~l~~~~~-~lG~~~~~~~----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g--~~v 93 (117)
T 1uit_A 22 HVKVQKGSE-PLGISIVSGE----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQC--DTI 93 (117)
T ss_dssp EEEEECSSC-CCCEEEEECT----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCC--SEE
T ss_pred EEEEEeCCC-CccEEEEccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeE
Confidence 588888764 4999998653 3489999999999999999 9999999999999999999999998887766 488
Q ss_pred EEEEEeCCce
Q psy3479 145 KLTVVPCAPV 154 (518)
Q Consensus 145 ~l~v~~~~~~ 154 (518)
+|+|.|....
T Consensus 94 ~l~v~r~~~~ 103 (117)
T 1uit_A 94 TILAQYNPHV 103 (117)
T ss_dssp EEEECCCSCC
T ss_pred EEEEEECCch
Confidence 9998876543
No 202
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=5.1e-11 Score=101.22 Aligned_cols=85 Identities=20% Similarity=0.363 Sum_probs=70.3
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|..+.+|||++.++.. ....+++|..|.+++||+++|+|++||+|++|||+++.+++++++..+|+..+..
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~-~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSL-RNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECC-SSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CcEEEEEEcCCCCcccEEEEccCC-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 357899999777899999986321 1223599999999999999999999999999999999999999999999976665
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.+.
T Consensus 94 v~l~v~ 99 (117)
T 1v62_A 94 VRLEIL 99 (117)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 544443
No 203
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=9.7e-11 Score=97.81 Aligned_cols=85 Identities=25% Similarity=0.343 Sum_probs=70.2
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC------CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW------GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 421 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~------g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~ 421 (518)
.++|.|.|. ..+|||+|.++.. .....+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+++
T Consensus 9 ~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (107)
T 1uhp_A 9 SLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFK 87 (107)
T ss_dssp EEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 468999995 7899999986321 112458999999999999999339999999999999999999999999999
Q ss_pred HhcCcCCeeEEE
Q psy3479 422 ILMKTMPTSMFR 433 (518)
Q Consensus 422 ~~~~~v~~~v~r 433 (518)
..+..+.+.+.|
T Consensus 88 ~~~~~v~l~v~R 99 (107)
T 1uhp_A 88 TAKEPIVVQVLR 99 (107)
T ss_dssp HCCSSEEEEEEE
T ss_pred cCCCcEEEEEEe
Confidence 877766665554
No 204
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.18 E-value=7.4e-11 Score=106.84 Aligned_cols=85 Identities=26% Similarity=0.364 Sum_probs=70.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.++|.|.|.. .+|||+|.+++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+
T Consensus 81 ~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~ 159 (170)
T 3egg_C 81 LFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 159 (170)
T ss_dssp EEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHC
T ss_pred EEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3578899864 68999998732222 234799999999999999999999999999999999999999999999998
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 160 g~~v~L~V~R 169 (170)
T 3egg_C 160 KGRVRFMIGR 169 (170)
T ss_dssp CSEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 7766655544
No 205
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.18 E-value=4e-11 Score=103.90 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=68.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC-cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~-~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+.|.|.|. ..+|||+|.++.... ...+++|..|.++++|+++|.|++||+|++|||+++.+++|++++.+|+.+.+.
T Consensus 30 ~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 108 (130)
T 1i16_A 30 VCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG 108 (130)
T ss_dssp EEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSS
T ss_pred EEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 578999995 678999999632100 134799999999999999955999999999999999999999999999987654
Q ss_pred -CCeeEEE
Q psy3479 427 -MPTSMFR 433 (518)
Q Consensus 427 -v~~~v~r 433 (518)
+.+.+.|
T Consensus 109 ~v~l~v~r 116 (130)
T 1i16_A 109 PVTIVIRR 116 (130)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 4444433
No 206
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=9.7e-12 Score=107.21 Aligned_cols=84 Identities=30% Similarity=0.490 Sum_probs=69.7
Q ss_pred eeEEEEccCCcceeEEEEec-------------------CC-cC------CCCcEEEEEecCCChhhhcCCCCCCCEEEE
Q psy3479 64 DEVVVPKAKGEILGVVIVES-------------------GW-GS------MLPTVVIANLAPAGAAARCGQLNIGDQIIA 117 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~-------------------~~-~~------~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~ 117 (518)
+.|+|.|...+ |||+|.+. .. |. ...+++|..|.++|||+++| |++||+|++
T Consensus 10 r~v~l~r~~~g-~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ 87 (126)
T 2yuy_A 10 KTVTLKRTSQG-FGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIK 87 (126)
T ss_dssp CCEEEECCSSS-CSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCCE
T ss_pred EEEEEEECCCC-cceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEEE
Confidence 35889988765 99999741 00 00 12468999999999999999 999999999
Q ss_pred ECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeC
Q psy3479 118 VNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPC 151 (518)
Q Consensus 118 VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~ 151 (518)
|||+++.++++++++++|+..+ ..|+|+|.|.
T Consensus 88 ing~~v~~~~~~~~~~~l~~~g--~~v~l~v~r~ 119 (126)
T 2yuy_A 88 VNGESVIGKTYSQVIALIQNSD--TTLELSVMPK 119 (126)
T ss_dssp ETTEECSSCCHHHHHHHHHTCT--TEEEEECCCC
T ss_pred ECCEECCCCCHHHHHHHHHcCC--CEEEEEEEEC
Confidence 9999999999999999999875 5899988765
No 207
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.18 E-value=1.8e-10 Score=106.93 Aligned_cols=73 Identities=27% Similarity=0.407 Sum_probs=64.8
Q ss_pred cceeEEEEecCCc------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEE
Q psy3479 74 EILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLT 147 (518)
Q Consensus 74 ~~lG~~l~~~~~~------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~ 147 (518)
.+|||+|.++..+ ....+++|..|.++|||++ | |++||+|++|||+++.+++|.+++.+++..+. .|.|+
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~--~v~l~ 77 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQN--TVELI 77 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS--EEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--eEEEE
Confidence 3599999975432 1356899999999999999 7 99999999999999999999999999999985 89999
Q ss_pred EEe
Q psy3479 148 VVP 150 (518)
Q Consensus 148 v~~ 150 (518)
|.|
T Consensus 78 v~r 80 (195)
T 2qbw_A 78 IVR 80 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 208
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.17 E-value=7.2e-11 Score=98.40 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=69.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|.|.|..+.+|||.+.. +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~---~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 77 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRI---EKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 77 (106)
T ss_dssp CEEEEEECCTTCCCCCEEEC---CTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEE
T ss_pred CEEEEEEeCCCCeeCEEEEE---EeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 46789999877899999985 2234578999999999999999 9999999999999999999999999998777765
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 78 ~l~v~r 83 (106)
T 3ngh_A 78 TLLVLD 83 (106)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 555543
No 209
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.1e-10 Score=97.60 Aligned_cols=85 Identities=27% Similarity=0.400 Sum_probs=70.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.+.|.|.|. ..+|||+|.++..+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..
T Consensus 10 ~~~v~l~k~-~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 88 (107)
T 1wf8_A 10 LFPVELEKD-EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT 88 (107)
T ss_dssp EEEEEEECB-TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC
T ss_pred EEEEEEEEC-CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 357888885 578999998721111 234899999999999999999999999999999999999999999999987
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 89 ~~~v~l~v~R 98 (107)
T 1wf8_A 89 KGNVRFVIGR 98 (107)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 7766666554
No 210
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.17 E-value=1.7e-10 Score=90.89 Aligned_cols=73 Identities=26% Similarity=0.442 Sum_probs=64.0
Q ss_pred EEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEE
Q psy3479 68 VPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLT 147 (518)
Q Consensus 68 l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~ 147 (518)
+.+...+.|||.+. .+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|++..+ .+.|+
T Consensus 7 ~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~--~v~l~ 76 (81)
T 2rcz_A 7 VKSRKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG--KLKMV 76 (81)
T ss_dssp ECCSTTCCCCEEEE--------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT--EEEEE
T ss_pred EECCCCCCCCEEEe--------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCC--eEEEE
Confidence 44555667999885 268999999999999999999999999999999999999999999998764 88888
Q ss_pred EEe
Q psy3479 148 VVP 150 (518)
Q Consensus 148 v~~ 150 (518)
|.|
T Consensus 77 v~R 79 (81)
T 2rcz_A 77 VQR 79 (81)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
No 211
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.17 E-value=8.8e-11 Score=95.98 Aligned_cols=84 Identities=20% Similarity=0.285 Sum_probs=67.9
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
.++.|.|.|. ..+|||++.+.. +.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+.
T Consensus 3 ~~r~v~l~k~-~~~~G~~l~~~~-~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 3 KPRCLHLEKG-PQGFGFLLREEK-GLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCEEEEEECB-TTBSCEEEEEEE-CTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEeC-CCcccEEEEecc-CCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3578999995 458999998621 112 2379999999999999999 99999999999999999999999999988655
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 80 ~v~l~v~r 87 (96)
T 2v90_A 80 CVSLTVVD 87 (96)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 54444433
No 212
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.17 E-value=1.4e-10 Score=98.82 Aligned_cols=82 Identities=17% Similarity=0.304 Sum_probs=69.5
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
+..+.+.|.|....+|||+|.++. .....+++|..|.+++||+++|+|++||+|++|||+++.+++|.++..+++..+.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGA-DLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCS-SSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCeEEEEEEeCCCCccCEEEeCCC-CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345678888877889999998622 2224589999999999999999999999999999999999999999999998877
Q ss_pred cCC
Q psy3479 426 TMP 428 (518)
Q Consensus 426 ~v~ 428 (518)
.+.
T Consensus 93 ~~~ 95 (119)
T 1x6d_A 93 PRQ 95 (119)
T ss_dssp SSE
T ss_pred CeE
Confidence 543
No 213
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=1.3e-10 Score=96.61 Aligned_cols=81 Identities=26% Similarity=0.358 Sum_probs=67.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|.|.|..+.+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++. +..+
T Consensus 16 ~~~v~l~k~~~~~lG~~~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v 91 (104)
T 1wi2_A 16 PRIVTLKKPPGAQLGFNIRGGKA--SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREI 91 (104)
T ss_dssp CEEEEECCCTTCCCSEEEECCSS--SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSE
T ss_pred CEEEEEEeCCCCCccEEEEcccC--CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEE
Confidence 57899999877899999986221 12479999999999999999 99999999999999999999999999987 5554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 92 ~l~v~ 96 (104)
T 1wi2_A 92 SMRVR 96 (104)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 214
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.16 E-value=1.2e-10 Score=95.25 Aligned_cols=84 Identities=26% Similarity=0.422 Sum_probs=67.9
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC--CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g--~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+|.|.| ...+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.+++++++..+++..+..
T Consensus 5 ~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 83 (97)
T 2jil_A 5 VEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE 83 (97)
T ss_dssp EEEEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred EEEEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5788888 467999999873211 1134899999999999999999999999999999999999999999999886665
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 84 v~l~v~R 90 (97)
T 2jil_A 84 AALLIEY 90 (97)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555544
No 215
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.16 E-value=1.7e-10 Score=94.65 Aligned_cols=84 Identities=25% Similarity=0.431 Sum_probs=68.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. ..+|||++.++. .....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..+..+
T Consensus 5 ~~~v~l~~~-~~~lG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 5 ETTIEISKG-RTGLGLSIVGGS-DTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp EEEEEEECB-TTBTCEEEEECT-TSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEEEEC-CCcccEEEecCC-CCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 357899985 678999998632 112248999999999999999999999999999999999999999999988776655
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 83 ~l~v~R 88 (98)
T 2opg_A 83 RLTLYR 88 (98)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 555443
No 216
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.16 E-value=1.6e-10 Score=96.45 Aligned_cols=85 Identities=24% Similarity=0.329 Sum_probs=68.7
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCC----------cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHH
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGS----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 416 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~----------~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~ 416 (518)
.++.|.|.|.. .+|||+|.++.... ..++++|..|.++|||+++| |+.||+|++|||.++.+++++++
T Consensus 6 ~~r~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp CCEEEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 35789999964 48999998632110 13456899999999999999 99999999999999999999999
Q ss_pred HHHHHHhcCcCCeeEEE
Q psy3479 417 QTYIKILMKTMPTSMFR 433 (518)
Q Consensus 417 ~~~l~~~~~~v~~~v~r 433 (518)
..+++..+..+.+.+.|
T Consensus 84 ~~~l~~~g~~v~l~v~r 100 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLS 100 (107)
T ss_dssp HHHHHHCSSEEEEEEEC
T ss_pred HHHHHcCCCEEEEEEEc
Confidence 99999877665555544
No 217
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.16 E-value=7.7e-11 Score=98.25 Aligned_cols=80 Identities=26% Similarity=0.301 Sum_probs=69.6
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMP 428 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~ 428 (518)
.+|+|.|..+.+|||++.+ ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..++.+.
T Consensus 4 ~~v~L~k~~~~glG~~i~~-----~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 78 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSP-----NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 78 (106)
T ss_dssp EEEEECCBSSSTTCCEEEE-----CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEE
T ss_pred EEEEEEeCCCCccCEEEEe-----CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 4789988778899999975 12479999999999999999999999999999999999999999999988777766
Q ss_pred eeEEE
Q psy3479 429 TSMFR 433 (518)
Q Consensus 429 ~~v~r 433 (518)
+.+.|
T Consensus 79 l~v~R 83 (106)
T 2la8_A 79 MEVTR 83 (106)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66655
No 218
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.3e-10 Score=97.57 Aligned_cols=86 Identities=22% Similarity=0.248 Sum_probs=71.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC---cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~---~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
.+.|.|.|.. .+|||+|.++.... ...+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+
T Consensus 18 ~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g 96 (120)
T 2eno_A 18 EEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAG 96 (120)
T ss_dssp EEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHC
T ss_pred eEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5689999964 89999998632110 1348999999999999999999999999999999999999999999999887
Q ss_pred CcCCeeEEEe
Q psy3479 425 KTMPTSMFRL 434 (518)
Q Consensus 425 ~~v~~~v~r~ 434 (518)
..+.+.+.|-
T Consensus 97 ~~v~l~v~R~ 106 (120)
T 2eno_A 97 YAVSLRVQHR 106 (120)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEeC
Confidence 7666666553
No 219
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.16 E-value=9.1e-11 Score=101.35 Aligned_cols=88 Identities=24% Similarity=0.404 Sum_probs=71.8
Q ss_pred CccEEEEEeCCC-CCceeEEEEeCC------CCC-cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHH
Q psy3479 346 ELQKEVVVPKAK-GEILGVVIVESG------WGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQ 417 (518)
Q Consensus 346 ~~~~~V~L~k~~-~~~lG~~i~~~~------~g~-~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~ 417 (518)
...+.|.|.|.. +++|||+|.++. ++. ..++++|..|.++|||+++|.|++||+|++|||.++.+++++++.
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 446889999974 589999998621 111 124799999999999999998999999999999999999999999
Q ss_pred HHHHHhcCcCCeeEEE
Q psy3479 418 TYIKILMKTMPTSMFR 433 (518)
Q Consensus 418 ~~l~~~~~~v~~~v~r 433 (518)
.+++..+..+.+.+.|
T Consensus 108 ~~l~~~~~~v~l~v~r 123 (128)
T 1nf3_C 108 DMMIANSRNLIITVRP 123 (128)
T ss_dssp HHHHHTTTSEEEEEEC
T ss_pred HHHHcCCCeEEEEEEE
Confidence 9999877765555543
No 220
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.16 E-value=1.5e-10 Score=92.21 Aligned_cols=71 Identities=21% Similarity=0.283 Sum_probs=61.5
Q ss_pred EEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 350 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 350 ~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
+|+|.|. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..
T Consensus 3 ~v~l~k~-~~g~G~~i~~~~~--~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 73 (85)
T 2i04_A 3 HTKLRKS-SRGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 73 (85)
T ss_dssp EEEEECB-TTBSSEEEEECCS--TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEC-CCCCCEEEEcccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 6788885 5689999986321 234799999999999999999999999999999999999999999999876
No 221
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1e-10 Score=94.90 Aligned_cols=81 Identities=30% Similarity=0.401 Sum_probs=66.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|+|.|. ..+|||++.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++.....+
T Consensus 6 ~r~v~l~k~-~~glG~~l~~~~~--~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 6 SGVVELPKT-DEGLGFNIMGGKE--QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp SCEEEEECC-TTCCCEEEECSSS--SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred CEEEEEEeC-CCCccEEEecccC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 578999995 6899999986211 2347999999999999999559999999999999999999999999998776544
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 83 ~l~v 86 (93)
T 2dkr_A 83 KLVV 86 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 222
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.15 E-value=2.1e-10 Score=100.45 Aligned_cols=93 Identities=24% Similarity=0.290 Sum_probs=70.7
Q ss_pred eEEEEccCC---cceeEEEEecCCc----------CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 65 EVVVPKAKG---EILGVVIVESGWG----------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 65 ~v~l~k~~~---~~lG~~l~~~~~~----------~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
.|+|.|... .+|||++.++..- ....+++|..|.++|||+++| |++||+|++|||+.+.++++.++
T Consensus 26 ~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~ 104 (139)
T 2vz5_A 26 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 104 (139)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHH
Confidence 577766432 3699999863220 124689999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEEEeCCceeEEEe
Q psy3479 132 QTYIKNSKNQTVVKLTVVPCAPVVEVKI 159 (518)
Q Consensus 132 ~~~l~~~~~~~~v~l~v~~~~~~~~~~~ 159 (518)
+.+|+... +..|+|+|.|......+.+
T Consensus 105 ~~~l~~~~-g~~v~l~v~R~g~~~~v~~ 131 (139)
T 2vz5_A 105 RKRLTKRS-EEVVRLLVTRQSLQKAVQQ 131 (139)
T ss_dssp HHHHCCTT-CSEEEEEEEECC-------
T ss_pred HHHHHhCC-CCEEEEEEEECCEEEEEEE
Confidence 99999843 3689999998765444433
No 223
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.15 E-value=1.5e-10 Score=92.78 Aligned_cols=79 Identities=25% Similarity=0.314 Sum_probs=63.9
Q ss_pred EEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCe
Q psy3479 351 VVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPT 429 (518)
Q Consensus 351 V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~ 429 (518)
+++.+....+|||++.+ +.. ..+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++.....+.+
T Consensus 4 ~~v~~~~~~~lG~~l~~---~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITG---GRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRL 79 (87)
T ss_dssp EEEEECSSSCCSEEEEE---EGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEE
T ss_pred EEEEECCCCccCEEEec---ccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 44444456899999986 222 2479999999999999999 999999999999999999899999999887655444
Q ss_pred eEEE
Q psy3479 430 SMFR 433 (518)
Q Consensus 430 ~v~r 433 (518)
.+.|
T Consensus 80 ~v~R 83 (87)
T 2pa1_A 80 QLDR 83 (87)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 224
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.15 E-value=1.4e-10 Score=96.74 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=66.2
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcC-CcEEEEEecCCChhhhcC-CCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSML-PTVVIANLAPAGAAARCG-QLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~-~g~~I~~V~~~s~A~~~G-~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
..+.+.|.|....+|||++.+ +... .+++|..|.++|||+++| +|+.||+|++|||.++.++++.++..+++...
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~g---g~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKG---GYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEE---EGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CEEEEEEEcCCCCCCCEEEEc---cCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 357899999776899999986 2222 378999999999999999 69999999999999999999999999999876
Q ss_pred C
Q psy3479 425 K 425 (518)
Q Consensus 425 ~ 425 (518)
.
T Consensus 94 ~ 94 (107)
T 3nfk_A 94 E 94 (107)
T ss_dssp G
T ss_pred c
Confidence 4
No 225
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=97.45 Aligned_cols=84 Identities=20% Similarity=0.215 Sum_probs=68.9
Q ss_pred CccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 346 ELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 346 ~~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
...+.|.|.|. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+.
T Consensus 23 ~~~~~v~l~~~-~~glG~~l~~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~ 99 (112)
T 2r4h_A 23 MDFYTVELERG-AKGFGFSLRGGRE--YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGR 99 (112)
T ss_dssp CCEEEEEEECB-TTBTSEEEEECGG--GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CceEEEEEEcC-CCccCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34578999985 4679999986221 23479999999999999999999999999999999999999999999887666
Q ss_pred cCCeeEE
Q psy3479 426 TMPTSMF 432 (518)
Q Consensus 426 ~v~~~v~ 432 (518)
.+.+.+.
T Consensus 100 ~v~l~v~ 106 (112)
T 2r4h_A 100 RVRLFLK 106 (112)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 5555443
No 226
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2.3e-11 Score=99.58 Aligned_cols=78 Identities=23% Similarity=0.310 Sum_probs=67.4
Q ss_pred eEEEEccCCc-ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 65 EVVVPKAKGE-ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 65 ~v~l~k~~~~-~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+|+|.|.+.. +|||.+.+ ..+++|..|.++|||+ +| |++||+|++|||+++.++++.+++.+++..+ ..
T Consensus 11 ~v~l~~~~~~~~~G~~l~~------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g--~~ 80 (96)
T 2edv_A 11 TVKIDKDTLLQDYGFHISE------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE--DS 80 (96)
T ss_dssp EEEECCCSSSCSCSBCCCS------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS--SC
T ss_pred EEEEEECCCCCcccEEEec------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--Ce
Confidence 5888887743 69999964 3468999999999995 56 9999999999999999999999999999866 48
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|+|+|.|..
T Consensus 81 v~l~v~R~~ 89 (96)
T 2edv_A 81 LSITVVRCT 89 (96)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999998865
No 227
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.15 E-value=2.6e-10 Score=119.48 Aligned_cols=139 Identities=14% Similarity=0.152 Sum_probs=100.8
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEeeCCCCc----
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIKRPDTK---- 165 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~rp~~~---- 165 (518)
.|++|..|.++|||+++| |+.||+|++|||+.+... .+...+|.....+..|+|+|.|.....++.+......
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~ 358 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQ 358 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHH
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccc
Confidence 589999999999999999 999999999999999865 6777788765555799999999876655554321110
Q ss_pred -------cccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhH
Q psy3479 166 -------YQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMM 238 (518)
Q Consensus 166 -------~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~ 238 (518)
.-+|+.+..-.... +. .....|++|..+. |+++|+.. +|+.||.|++|||..+.+.
T Consensus 359 ~~~~~~~~~~G~~l~~~~~~~----~~-------~~~~~Gv~V~~V~-~gspA~~a---GL~~GD~I~~Vng~~v~~~-- 421 (451)
T 3pv2_A 359 KLQSNNPFLYGLALRAFEQES----PP-------HGNVIGVQVVGAS-ENSAGWRA---GIRPGDIIISANKKPVTDV-- 421 (451)
T ss_dssp HHHHHSTTTTTEEEEEEEEEC----TT-------SCEEEEEEEEEEC-TTSHHHHH---TCCTTCEEEEETTEECCSH--
T ss_pred ccccccccccccccccCChhH----hc-------ccCCCceEEEEEC-CCCHHHHc---CCCCCCEEEEECCEECCCH--
Confidence 12333332110000 00 0012689999998 99998876 6999999999999998765
Q ss_pred HHHHHHhhcc
Q psy3479 239 DHALRTISYI 248 (518)
Q Consensus 239 ~eav~~lk~~ 248 (518)
++..+.++..
T Consensus 422 ~~~~~~l~~~ 431 (451)
T 3pv2_A 422 KSLQTIAQEK 431 (451)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHHhcC
Confidence 6777777663
No 228
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=94.11 Aligned_cols=80 Identities=20% Similarity=0.327 Sum_probs=66.5
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-CCCcE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNS-KNQTV 143 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~-~~~~~ 143 (518)
.+.|.+..++ +||.+...+ .+.+|..|.+|+||+++| |++||+|++|||..+...++++++.+++++ ..+..
T Consensus 20 ~l~l~~~~~g-~G~~l~~~~-----~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~ 92 (101)
T 3qik_A 20 RLLILPQEED-YGFDIEEKN-----KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRP 92 (101)
T ss_dssp EEEECCCSSS-SSEEEEEET-----TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCC
T ss_pred eEEEEeCCCc-ccEEEEccC-----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCe
Confidence 4666665544 999998533 368999999999999999 999999999999999999999999999984 22258
Q ss_pred EEEEEEeC
Q psy3479 144 VKLTVVPC 151 (518)
Q Consensus 144 v~l~v~~~ 151 (518)
|.|.|+..
T Consensus 93 v~LLV~~~ 100 (101)
T 3qik_A 93 LRLLVATK 100 (101)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99988754
No 229
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=8.2e-11 Score=97.89 Aligned_cols=85 Identities=20% Similarity=0.336 Sum_probs=69.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC----CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG----SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g----~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.++|.|.|. ..+|||+|.++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..
T Consensus 8 ~~~v~l~~~-~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (105)
T 1wha_A 8 RHVACLARS-ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA 86 (105)
T ss_dssp EEEEEECCC-TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC
T ss_pred eEEEEEEeC-CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 357888884 56799999863210 1235899999999999999999999999999999999999999999999877
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 87 g~~v~l~v~R 96 (105)
T 1wha_A 87 SPTIALLLER 96 (105)
T ss_dssp CSCEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 6665555544
No 230
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=2.8e-11 Score=101.72 Aligned_cols=80 Identities=24% Similarity=0.317 Sum_probs=67.9
Q ss_pred eeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 64 DEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 64 ~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
+.|+|.|..+ +|||.+.+. .+++|..|.+++||+++| |++||+|++|||+.+.++++++++++|+..++ ..
T Consensus 17 r~v~l~~~~~-~~G~~l~~~------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~-~~ 87 (111)
T 1vae_A 17 RGIHFTVEEG-DLGFTLRGN------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGG-EE 87 (111)
T ss_dssp CCCCEECCSS-CCSCCEESS------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTT-SE
T ss_pred eEEEEEcCCC-cccEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-ce
Confidence 4577888654 499999632 257899999999999999 99999999999999999999999999998874 46
Q ss_pred EEEEEEeCC
Q psy3479 144 VKLTVVPCA 152 (518)
Q Consensus 144 v~l~v~~~~ 152 (518)
|.|+|.+..
T Consensus 88 v~l~V~~~~ 96 (111)
T 1vae_A 88 VEMKVVSLL 96 (111)
T ss_dssp ECEEEECEE
T ss_pred EEEEEEecC
Confidence 888887653
No 231
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.14 E-value=6.3e-11 Score=100.64 Aligned_cols=87 Identities=20% Similarity=0.190 Sum_probs=71.1
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeecc-CCChHHHHHHHHHhc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV-GLPLSTCQTYIKILM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~-~~s~~~~~~~l~~~~ 424 (518)
..+.|.|.|..+.+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++. ++++.++..+++..+
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~ 99 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKAK 99 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCC
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCC
Confidence 3578999997678999999863211 11348999999999999999999999999999999998 999999999998876
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 100 ~~v~l~v~R 108 (117)
T 2o2t_A 100 DTVQLVIAR 108 (117)
T ss_dssp SEEEEEEES
T ss_pred CEEEEEEEe
Confidence 665555443
No 232
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.14 E-value=1.8e-10 Score=98.82 Aligned_cols=84 Identities=20% Similarity=0.337 Sum_probs=70.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. ..+|||+|.++. .....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..+
T Consensus 26 ~~~v~l~k~-~~glG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v 103 (124)
T 2daz_A 26 LHIIELEKD-KNGLGLSLAGNK-DRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKV 103 (124)
T ss_dssp EEEEEEECC-SSCCCEEEECBS-STTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEE
T ss_pred eEEEEEEeC-CCccCEEEeccC-CCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 468999995 678999998632 222358999999999999999999999999999999999999999999998887765
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 104 ~l~v~R 109 (124)
T 2daz_A 104 KLVFIR 109 (124)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555544
No 233
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=97.40 Aligned_cols=78 Identities=24% Similarity=0.312 Sum_probs=63.1
Q ss_pred CCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCee
Q psy3479 355 KAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPTS 430 (518)
Q Consensus 355 k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~~ 430 (518)
+....+|||+|.++- +. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+..+.+.
T Consensus 9 ~~~~~~~Gf~i~gG~-~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 9 PRGSKGLGFSIAGGV-GNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp ---CCCSCEEEEECT-TSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEE
T ss_pred CCCCCccCEEEEecc-CCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 345789999999732 22 1238999999999999999999999999999999999999999999998877665555
Q ss_pred EEE
Q psy3479 431 MFR 433 (518)
Q Consensus 431 v~r 433 (518)
+.|
T Consensus 88 v~R 90 (106)
T 4amh_A 88 VAK 90 (106)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 234
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.1e-10 Score=96.89 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=68.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
.+.|.|.| ...+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.+++++++..+++.+ +.
T Consensus 10 ~~~v~l~~-~~~g~G~~i~~g~~--~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~ 86 (103)
T 1uep_A 10 ELDVHLRR-MESGFGFRILGGDE--PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG 86 (103)
T ss_dssp EECCEEES-SSSSCCEEECCCCS--TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEEEEe-CCCccCEEEeeecC--CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 35688888 56789999985211 234789999999999999999999999999999999999999999999887 56
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 87 ~v~l~v~R 94 (103)
T 1uep_A 87 QVNLTVRR 94 (103)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 66666554
No 235
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=93.12 Aligned_cols=79 Identities=23% Similarity=0.341 Sum_probs=63.9
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+|.+.+ ..+|||+|.+ +.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+
T Consensus 5 ~~v~~~~--~~~~G~~l~g---g~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (89)
T 2q3g_A 5 FKVVLEG--PAPWGFRLQG---GKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERL 78 (89)
T ss_dssp EEEEEES--SSCCCEEEEE---EGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEE
T ss_pred EEEEEcC--CCcccEEEEC---cCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 3566654 5789999986 222 2378999999999999999 9999999999999999999999999888776655
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 79 ~l~v~R 84 (89)
T 2q3g_A 79 SLGLSR 84 (89)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555443
No 236
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.13 E-value=1.2e-10 Score=96.27 Aligned_cols=80 Identities=23% Similarity=0.277 Sum_probs=66.8
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.|.|.|. ..+|||++.+ +....+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++..+..
T Consensus 6 ~~r~v~l~k~-~~g~G~~l~~---~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (102)
T 2d90_A 6 SGRVVVIKKG-SNGYGFYLRA---GPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 80 (102)
T ss_dssp SSEEEEEECC-SSSSSCEEEE---CSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTE
T ss_pred CCEEEEEeeC-CCCccEEEEe---ecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4578999995 5689999986 2234589999999999999999 999999999999999999899999999876555
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 81 v~l~v 85 (102)
T 2d90_A 81 TTLLV 85 (102)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 237
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.13 E-value=3.2e-11 Score=97.60 Aligned_cols=80 Identities=25% Similarity=0.269 Sum_probs=65.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++.|.|.|.. .+|||++.+ .....+++|..|.++|||+++| |++||+|++|||.++.+++++++..+++..+..+
T Consensus 4 pr~v~l~k~~-~~~G~~l~~---~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 78 (91)
T 2vsp_A 4 PKLCRLAKGE-NGYGFHLNA---IRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNV 78 (91)
T ss_dssp EEEEEEECBT-TBTSCCCBC---CTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEE
T ss_pred cEEEEEEeCC-CcccEEEEe---ccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 5789999964 489999975 2233578999999999999999 9999999999999999999999999998775554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 79 ~l~v~ 83 (91)
T 2vsp_A 79 TLLVC 83 (91)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 238
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=3e-11 Score=101.63 Aligned_cols=83 Identities=30% Similarity=0.489 Sum_probs=68.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC-------CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG-------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 420 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g-------~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l 420 (518)
.++|.|.|..+.+|||+|.++... ....+++|..|.++|+|+++|+|++||+|++|||+++.++++.++..++
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 467999997778999999973211 1234799999999999999999999999999999999999999999999
Q ss_pred HHhcCcCCee
Q psy3479 421 KILMKTMPTS 430 (518)
Q Consensus 421 ~~~~~~v~~~ 430 (518)
+..+..+.+.
T Consensus 90 ~~~g~~v~l~ 99 (111)
T 1uju_A 90 RSVGDTLTVL 99 (111)
T ss_dssp SSCSSEEEEC
T ss_pred HcCCCeEEEE
Confidence 8765544333
No 239
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.13 E-value=4.2e-10 Score=117.49 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=98.8
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee--C-CCCc-
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK--R-PDTK- 165 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~--r-p~~~- 165 (518)
.|++|..|.++|||+++| |+.||+|++|||+.+.++ .+...+|.....+..|+|+|.|.....++.+. . +...
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~ 339 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSA 339 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccc
Confidence 589999999999999999 999999999999999865 56677777655456999999998765544433 1 1110
Q ss_pred ----cccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhHHHH
Q psy3479 166 ----YQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHA 241 (518)
Q Consensus 166 ----~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~ea 241 (518)
..+|+....-.. .. ......|++|..+. ++++|+.. +|+.||.|++|||..+.+ .++.
T Consensus 340 ~~~~~~~gl~~~~~~~-~~-----------~~~~~~gv~V~~V~-~~spA~~a---GL~~GD~I~~vng~~v~~--~~~~ 401 (436)
T 4a8c_A 340 SAEMITPALEGATLSD-GQ-----------LKDGGKGIKIDEVV-KGSPAAQA---GLQKDDVIIGVNRDRVNS--IAEM 401 (436)
T ss_pred cccccccCceeeeccc-cc-----------ccCCCCCEEEEEeC-CCCHHHHc---CCCCCCEEEEECCEECCC--HHHH
Confidence 112332221100 00 00111578999998 99998877 599999999999999875 4677
Q ss_pred HHHhhcc
Q psy3479 242 LRTISYI 248 (518)
Q Consensus 242 v~~lk~~ 248 (518)
.+.++..
T Consensus 402 ~~~l~~~ 408 (436)
T 4a8c_A 402 RKVLAAK 408 (436)
T ss_pred HHHHHhC
Confidence 7777764
No 240
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.13 E-value=2.2e-10 Score=93.77 Aligned_cols=82 Identities=29% Similarity=0.455 Sum_probs=66.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.++|.|.| ..++|||++.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+..+
T Consensus 6 ~~~v~l~~-~~~~lG~~i~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 82 (97)
T 1n7e_A 6 IYTVELKR-YGGPLGITISGTEE--PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82 (97)
T ss_dssp EEEEEEEC-TTSCCCEEEECCSS--TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEEEe-CCCCcCEEEEcccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 46788877 46779999986221 1247999999999999999999999999999999999999999999998655554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 83 ~l~v~ 87 (97)
T 1n7e_A 83 TLKIK 87 (97)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 241
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.13 E-value=2.2e-10 Score=96.30 Aligned_cols=81 Identities=26% Similarity=0.406 Sum_probs=68.2
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. +.+|||+|.++ ...+++|..|.+++||+++|+|+.||+|++|||+++.++++.++..+++..+..+
T Consensus 16 ~~~v~l~~~-~~~lG~~l~~~----~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 90 (111)
T 2dlu_A 16 VEEVELIND-GSGLGFGIVGG----KTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSV 90 (111)
T ss_dssp EEEEEEECC-SSCCCEEEECC----SSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEE
T ss_pred eEEEEEEeC-CCccCEEEecc----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 467899884 67899999852 2247999999999999999999999999999999999999999999998876665
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 91 ~l~v~R 96 (111)
T 2dlu_A 91 RMLVAR 96 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555544
No 242
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.7e-10 Score=98.34 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=65.3
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhc--CCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC--GQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~--G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
..+.|.|.|...++|||+|.++.. ...+++|..|.++|||+++ | |++||+|++|||.++.+++|.++..+++..+
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYD--QKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGG--GTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCcCEEEecccC--CCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 357899999777789999986211 1236999999999999999 6 9999999999999999999999999999876
Q ss_pred C
Q psy3479 425 K 425 (518)
Q Consensus 425 ~ 425 (518)
.
T Consensus 92 ~ 92 (119)
T 2cs5_A 92 E 92 (119)
T ss_dssp H
T ss_pred c
Confidence 4
No 243
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.13 E-value=3.5e-10 Score=91.52 Aligned_cols=79 Identities=25% Similarity=0.419 Sum_probs=65.6
Q ss_pred eEEEEcc-CCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcE
Q psy3479 65 EVVVPKA-KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTV 143 (518)
Q Consensus 65 ~v~l~k~-~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~ 143 (518)
.|.+.+. ....|||.+. .+++|..|.++|||+++|+|++||+|++|||+++.++++.++.++|++.++ .
T Consensus 5 ~v~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~--~ 74 (92)
T 3cyy_A 5 KVTLVKSAKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG--K 74 (92)
T ss_dssp EEEEECSSTTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT--E
T ss_pred EEEEEeCCCCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC--c
Confidence 3555543 3356999885 378999999999999999999999999999999999999999999999774 8
Q ss_pred EEEEEEeCCc
Q psy3479 144 VKLTVVPCAP 153 (518)
Q Consensus 144 v~l~v~~~~~ 153 (518)
+.|+|.|...
T Consensus 75 v~l~v~r~g~ 84 (92)
T 3cyy_A 75 LKMVVQRDER 84 (92)
T ss_dssp EEEEEEC---
T ss_pred EEEEEEeCCc
Confidence 8999987643
No 244
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=3.8e-11 Score=99.60 Aligned_cols=76 Identities=21% Similarity=0.243 Sum_probs=65.1
Q ss_pred CCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeC
Q psy3479 72 KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPC 151 (518)
Q Consensus 72 ~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~ 151 (518)
.+..|||++.++.. ...+++|..|.+++||+++| |++||+|++|||+.+.++++.+++++|+..+ ..|+|+|.|.
T Consensus 13 ~~~~lG~~l~~g~~--~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g--~~v~l~v~R~ 87 (103)
T 1v5l_A 13 GPAPWGFRLSGGID--FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAAS--YQLCLKIDRA 87 (103)
T ss_dssp SSSCCSBCCEEETT--TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCC--SEEECEECCC
T ss_pred CCCCcCEEEecccc--CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CeEEEEEEEC
Confidence 34569999986442 13478999999999999999 9999999999999999999999999999984 5899888775
Q ss_pred C
Q psy3479 152 A 152 (518)
Q Consensus 152 ~ 152 (518)
.
T Consensus 88 g 88 (103)
T 1v5l_A 88 E 88 (103)
T ss_dssp T
T ss_pred C
Confidence 4
No 245
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.12 E-value=2.1e-10 Score=95.60 Aligned_cols=84 Identities=26% Similarity=0.356 Sum_probs=67.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC-CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW-GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~-g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+|+| | ...+|||+|.++.. .....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+..
T Consensus 12 ~~~v~l-~-~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 89 (106)
T 3axa_A 12 IITVTL-K-KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSV 89 (106)
T ss_dssp EEEEEE-E-CSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred EEEEEE-C-CCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 356777 5 46789999986221 12234899999999999999999999999999999999999999999999887666
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 90 v~l~v~R 96 (106)
T 3axa_A 90 VTLEVAK 96 (106)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 5555443
No 246
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=4e-10 Score=97.25 Aligned_cols=84 Identities=27% Similarity=0.386 Sum_probs=69.9
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
.+.+...+...|||++.+... ...+++|..|.++|||+++| |++||+|++|||+.+.++++.++++.++... .|
T Consensus 23 ~v~v~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~---~v 96 (128)
T 1uf1_A 23 KVNLVLGDGRSLGLTIRGGAE--YGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSSR---HL 96 (128)
T ss_dssp EEEEECCSSCCCCEEEECCTT--TTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS---EE
T ss_pred EEEEEECCCCccCEEEECccc--CCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC---eE
Confidence 466666555669999986321 23479999999999999999 9999999999999999999999999999864 89
Q ss_pred EEEEEeCCce
Q psy3479 145 KLTVVPCAPV 154 (518)
Q Consensus 145 ~l~v~~~~~~ 154 (518)
.|+|.|....
T Consensus 97 ~l~v~R~g~~ 106 (128)
T 1uf1_A 97 ILTVKDVGRL 106 (128)
T ss_dssp EEEEECCSCC
T ss_pred EEEEEECCcc
Confidence 9999876543
No 247
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.12 E-value=2.5e-10 Score=96.29 Aligned_cols=84 Identities=26% Similarity=0.376 Sum_probs=70.5
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
+.|.|.|. ..+|||++.+...+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+
T Consensus 6 ~~v~l~k~-~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (113)
T 2g5m_B 6 FPVELEKD-SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 84 (113)
T ss_dssp EEEECCCC-SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEeC-CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 57888884 578999998721111 2348999999999999999999999999999999999999999999999888
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 85 ~~v~l~v~R 93 (113)
T 2g5m_B 85 GRVRFMIGR 93 (113)
T ss_dssp SSCEEEEEE
T ss_pred CeEEEEEEe
Confidence 777777665
No 248
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.12 E-value=2.1e-10 Score=93.78 Aligned_cols=81 Identities=25% Similarity=0.256 Sum_probs=68.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
..++.|.|....+|||++.+ ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..++.+
T Consensus 9 ~~~v~l~~~~~~glG~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v 83 (96)
T 2qkv_A 9 KFNVDLMKKAGKELGLSLSP-----NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKV 83 (96)
T ss_dssp CEEEEEECBTTBCCCEEEEE-----CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred eEEEEEEeCCCCCccEEEEe-----CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcE
Confidence 35788988777899999975 1247999999999999999999999999999999999988999999998877765
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 84 ~l~v~R 89 (96)
T 2qkv_A 84 SMEVTR 89 (96)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 555544
No 249
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=3.6e-10 Score=94.78 Aligned_cols=85 Identities=28% Similarity=0.353 Sum_probs=69.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC-cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~-~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|.|.|. ..+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++...++..+..
T Consensus 9 ~~~v~l~~~-~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 87 (110)
T 1um1_A 9 VFTVELERG-PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKK 87 (110)
T ss_dssp EEEEEEECC-TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSE
T ss_pred EEEEEEEEC-CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 468899985 468999998733211 235899999999999999999999999999999999999999999999887665
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 88 v~l~v~R 94 (110)
T 1um1_A 88 MRFLVAK 94 (110)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 5555543
No 250
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=2.5e-10 Score=96.27 Aligned_cols=81 Identities=23% Similarity=0.427 Sum_probs=68.2
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|...++|||++.+. ..+++|..|.+++||+++|.|++||+|++|||+.+.+++++++..+++...+.
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 99 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGT 99 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEE
T ss_pred ceEEEEEEeCCCCceeEEEEeC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4678999997667999999863 34799999999999999993399999999999999999999999999877665
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.+.
T Consensus 100 v~l~v~ 105 (113)
T 1va8_A 100 LTFVLI 105 (113)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 251
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.11 E-value=3.6e-10 Score=96.85 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=71.5
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCC-C------CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHH
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGW-G------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTY 419 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~-g------~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~ 419 (518)
.++++.+.|....+|||++.+... + ....|++|..|.++|||+++|+|++||+|++|||.++.+++++++..+
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 357899998777899999986211 1 112479999999999999999999999999999999999999999999
Q ss_pred HHHhcCcCCeeEEE
Q psy3479 420 IKILMKTMPTSMFR 433 (518)
Q Consensus 420 l~~~~~~v~~~v~r 433 (518)
++..++.+.+.+.|
T Consensus 104 l~~~~~~v~l~v~r 117 (123)
T 2iwq_A 104 IRKAGNPVVFMVQS 117 (123)
T ss_dssp HHHCCSSEEEEEEC
T ss_pred HHcCCCeEEEEEEE
Confidence 99887766555554
No 252
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=2e-10 Score=97.56 Aligned_cols=84 Identities=20% Similarity=0.230 Sum_probs=68.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.++|.|.|..+.+|||+|.++.... ...+++|..|.++|||+ +| |++||+|++|||+++.+++|.++..+++..
T Consensus 15 ~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~~ 92 (117)
T 2csj_A 15 QYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRKS 92 (117)
T ss_dssp EEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHHS
T ss_pred EEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 4678999976689999998732111 13479999999999996 77 999999999999999999999999999987
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 93 ~~~v~l~v~R 102 (117)
T 2csj_A 93 GKIAAIVVKR 102 (117)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 7766666554
No 253
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.11 E-value=4e-10 Score=95.20 Aligned_cols=83 Identities=22% Similarity=0.293 Sum_probs=69.2
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+++|.|.|...++|||++.++.. ..++++|..|.++|||+++|+|++||+|++|||.++.+.+++++..+++...+.
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~--~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 101 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQ--YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 101 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CCEEEEEEECCCCcEeEEEEeCCC--CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 467899999877889999986322 124799999999999999999999999999999999888999999999877665
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 102 v~l~v 106 (114)
T 2gzv_A 102 VTIHY 106 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 254
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.11 E-value=2.8e-10 Score=98.60 Aligned_cols=81 Identities=23% Similarity=0.313 Sum_probs=64.8
Q ss_pred EeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc--CcCCe
Q psy3479 353 VPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM--KTMPT 429 (518)
Q Consensus 353 L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~--~~v~~ 429 (518)
+.|..+.+|||+|.++... ....++||..|.++|||+++|+|++||+|++|||+++.+++|+++..+|+.+. ..+.+
T Consensus 42 i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 121 (131)
T 1wfg_A 42 VPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVEL 121 (131)
T ss_dssp CCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEE
T ss_pred EecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3344678999999862211 11338999999999999999999999999999999999999999999999875 55555
Q ss_pred eEEE
Q psy3479 430 SMFR 433 (518)
Q Consensus 430 ~v~r 433 (518)
.+.|
T Consensus 122 ~v~R 125 (131)
T 1wfg_A 122 VVSR 125 (131)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5544
No 255
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=2.9e-10 Score=91.95 Aligned_cols=78 Identities=17% Similarity=0.276 Sum_probs=65.2
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. ..+|||.+.+. .+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++..+..+
T Consensus 4 ~r~v~l~~~-~~g~G~~l~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 75 (91)
T 2f5y_A 4 YRQITIPRG-KDGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEI 75 (91)
T ss_dssp EEEEEEECB-TTBTSEEEECS------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred eEEEEEEeC-CCCccEEEecC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 468999995 56799999741 258999999999999999 9999999999999999999999999988766655
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 76 ~l~v~R 81 (91)
T 2f5y_A 76 ILLVWR 81 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555444
No 256
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.10 E-value=3e-10 Score=91.17 Aligned_cols=77 Identities=21% Similarity=0.315 Sum_probs=62.8
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
+.|.| + ...+|||++.+ |.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 5 ~~v~l-~-~~~~~G~~l~~---g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 5 YSVSL-V-GPAPWGFRLQG---GKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEE-E-SSSCCCEEEEE---EGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEE-c-CCCcccEEEEC---cCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46777 3 35789999986 332 2378999999999999999 9999999999999999999899998888765554
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 79 ~l~v 82 (88)
T 2uzc_A 79 NMTL 82 (88)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 257
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=3.3e-10 Score=93.78 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=67.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC-CC------cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW-GS------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYI 420 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~-g~------~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l 420 (518)
+++|.|.|....+|||++.+... +. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..++
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46789998767899999986211 11 124799999999999999999999999999999999999999999999
Q ss_pred HHhcCcCCeeEEE
Q psy3479 421 KILMKTMPTSMFR 433 (518)
Q Consensus 421 ~~~~~~v~~~v~r 433 (518)
+..++.+.+.+.|
T Consensus 85 ~~~~~~v~l~v~r 97 (103)
T 2fcf_A 85 RKAGNPVVFMVQS 97 (103)
T ss_dssp HTCCSSEEEEEEC
T ss_pred HhCCCcEEEEEEE
Confidence 8876655555544
No 258
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.10 E-value=3.8e-10 Score=96.04 Aligned_cols=83 Identities=27% Similarity=0.320 Sum_probs=69.0
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.|.|.|. ..+|||++.+ +....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..+..
T Consensus 14 ~~~~v~l~k~-~~glG~~l~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 14 EPRRIVIHRG-STGLGFNIVG---GEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp SCEEEEEECT-TSCCCEEEEE---CGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred ccEEEEEEEC-CCCccEEEec---CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3578999995 5679999987 22345899999999999999999999999999999999999988888888877666
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 90 v~l~v~r 96 (119)
T 1tp5_A 90 VTIIAQY 96 (119)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555543
No 259
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=1.1e-10 Score=99.38 Aligned_cols=64 Identities=27% Similarity=0.412 Sum_probs=55.8
Q ss_pred ccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 450 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 450 ~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+|||++. ++.+.....++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|+..
T Consensus 28 ~glG~~i~-gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 28 GSLDLALE-GGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp SCCCCEEE-EBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CccCEEEE-cccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 48999997 55544445699999999999999933999999999999999999999999999865
No 260
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=97.36 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=67.5
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.|.|.| .+.+|||++.+ +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..
T Consensus 8 ~~r~v~l~k-~~~~~G~~l~~---~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 82 (106)
T 2eei_A 8 QPRLCYLVK-EGGSYGFSLKT---VQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSR 82 (106)
T ss_dssp SSEEEEEEC-CSSSCSCCEEC---CSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSE
T ss_pred CCEEEEEEE-CCCCCCEEEEe---ccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 357899999 57899999985 2234579999999999999999 999999999999999999999999999877665
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 83 v~l~v 87 (106)
T 2eei_A 83 VMFLL 87 (106)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 261
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=2.5e-10 Score=95.46 Aligned_cols=85 Identities=24% Similarity=0.301 Sum_probs=69.7
Q ss_pred cEEEEEeCCCCCceeEEEE-----eCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIV-----ESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 421 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~-----~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~ 421 (518)
.++|.|.|. +.+|||+|. ++... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++
T Consensus 10 ~~~v~l~k~-~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 88 (108)
T 1q7x_A 10 IFEVELAKN-DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR 88 (108)
T ss_dssp EEEEEEESS-SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHH
T ss_pred EEEEEEEEC-CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 468999995 678999998 42211 12358999999999999999999999999999999999999999999999
Q ss_pred HhcCcCCeeEEE
Q psy3479 422 ILMKTMPTSMFR 433 (518)
Q Consensus 422 ~~~~~v~~~v~r 433 (518)
..+..+.+.+.|
T Consensus 89 ~~g~~v~l~v~R 100 (108)
T 1q7x_A 89 NTGQVVHLLLEK 100 (108)
T ss_dssp HTTSEEEEEEEC
T ss_pred cCCCeEEEEEEe
Confidence 877665555443
No 262
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.10 E-value=4.6e-10 Score=93.63 Aligned_cols=84 Identities=23% Similarity=0.262 Sum_probs=67.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC----cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS----MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~----~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.++|.|.|..+.+|||++.++.... ...+++|..|.++|||+ +| |++||+|++|||.++.++++.++...++..
T Consensus 8 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 8 QHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 4689999987789999999732211 13489999999999999 88 999999999999999999888888777766
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 86 g~~v~l~v~R 95 (107)
T 2h2b_A 86 GKNAKITIRR 95 (107)
T ss_dssp CSEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 6665555544
No 263
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.09 E-value=5.6e-10 Score=90.96 Aligned_cols=81 Identities=26% Similarity=0.358 Sum_probs=65.4
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC------CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g------~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
++|.+.|. .+|||+|.++... ....+++|..|.++|||++ | |++||+|++|||+++.++++.++...++.
T Consensus 5 ~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 5 IRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 46777774 3799999973211 1234899999999999999 8 99999999999999999999999999987
Q ss_pred hcCcCCeeEEE
Q psy3479 423 LMKTMPTSMFR 433 (518)
Q Consensus 423 ~~~~v~~~v~r 433 (518)
.+..+.+.+.|
T Consensus 81 ~~~~v~l~v~R 91 (95)
T 1mfg_A 81 FQNTVELIIVR 91 (95)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 77766555544
No 264
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=3.2e-10 Score=95.77 Aligned_cols=83 Identities=28% Similarity=0.380 Sum_probs=67.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC----Cc-CCcEEEEEecCCChhhh-cCCCCCCCEEEEEcCeeccCCChHHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG----SM-LPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 421 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g----~~-~~g~~I~~V~~~s~A~~-~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~ 421 (518)
+++|.|.|....+|||+|.++... .. ..+++|..|.++|||++ +| |++||+|++|||.++.+++++++..+|+
T Consensus 11 ~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 89 (114)
T 1uew_A 11 TSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLIK 89 (114)
T ss_dssp CEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHHH
T ss_pred ceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 578999997778999999863211 11 11569999999999999 88 9999999999999999999999999999
Q ss_pred HhcCcCCeeE
Q psy3479 422 ILMKTMPTSM 431 (518)
Q Consensus 422 ~~~~~v~~~v 431 (518)
..+..+.+.+
T Consensus 90 ~~g~~v~l~v 99 (114)
T 1uew_A 90 DAGLSVTLRI 99 (114)
T ss_dssp HTTTEEEEEE
T ss_pred cCCCeEEEEE
Confidence 8655544444
No 265
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.09 E-value=5.1e-10 Score=93.51 Aligned_cols=86 Identities=21% Similarity=0.244 Sum_probs=69.0
Q ss_pred cEEEEEe-CCCCCceeEEEEeCCCCC---cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVP-KAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~-k~~~~~lG~~i~~~~~g~---~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.+.|.|. +....+|||++.++.... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..
T Consensus 13 ~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2jre_A 13 LYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNA 92 (108)
T ss_dssp EEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4578886 346789999998632111 234899999999999999999999999999999999999999999999886
Q ss_pred cCcCCeeEEE
Q psy3479 424 MKTMPTSMFR 433 (518)
Q Consensus 424 ~~~v~~~v~r 433 (518)
+..+.+.+.|
T Consensus 93 g~~v~l~v~R 102 (108)
T 2jre_A 93 GNPVRLLLIR 102 (108)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 6665555544
No 266
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.08 E-value=3.9e-10 Score=97.48 Aligned_cols=86 Identities=21% Similarity=0.349 Sum_probs=71.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCC---CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g---~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
.+.|.|.|....+|||++.++... ....+++|..|.++|||+++|+|++||+|++|||.++.+++++++..+++..+
T Consensus 16 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 95 (129)
T 2dmz_A 16 TYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAG 95 (129)
T ss_dssp EEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCC
T ss_pred EEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 468899776788999999862211 12358999999999999999999999999999999999999999999999866
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 96 ~~v~l~v~R 104 (129)
T 2dmz_A 96 QVVHLTLVR 104 (129)
T ss_dssp SSEEEEEEE
T ss_pred CeEEEEEEe
Confidence 666666554
No 267
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.08 E-value=3.3e-10 Score=118.00 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=70.7
Q ss_pred eEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 65 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 65 ~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
-|.+.|. ++|||++.++. ..|++|..|.+||||+++| |++||+|++|||+++.++++++++.+|++.+.+..|
T Consensus 4 ~V~l~k~--~~lG~~i~gg~----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v 76 (468)
T 3shw_A 4 LVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 76 (468)
T ss_dssp EEEEECC--SSCCEEEEEET----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred EEEEecC--CccceEEEccC----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 4677774 66999998755 3589999999999999999 999999999999999999999999999995444699
Q ss_pred EEEEEeCC
Q psy3479 145 KLTVVPCA 152 (518)
Q Consensus 145 ~l~v~~~~ 152 (518)
+|+|.|..
T Consensus 77 ~L~V~r~g 84 (468)
T 3shw_A 77 TILAQKKK 84 (468)
T ss_dssp EEEEEECH
T ss_pred EEEEEECC
Confidence 99999863
No 268
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=2.9e-10 Score=94.30 Aligned_cols=83 Identities=20% Similarity=0.276 Sum_probs=67.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. ..+|||+|.++.......+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+..+
T Consensus 12 ~~~v~l~~~-~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 90 (104)
T 2djt_A 12 HFSVELVRG-YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQL 90 (104)
T ss_dssp CEEEEEECC-SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEE
T ss_pred eEEEEEEeC-CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 468899985 4689999986221111347899999999999999999999999999999999999999999888766654
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 91 ~l~v 94 (104)
T 2djt_A 91 HLVI 94 (104)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 269
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=4.2e-10 Score=96.58 Aligned_cols=87 Identities=18% Similarity=0.282 Sum_probs=68.6
Q ss_pred eeEEEEccCC-cceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 64 DEVVVPKAKG-EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 64 ~~v~l~k~~~-~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
+++.+.|... .+|||++..........+++|..|.++|||+++|+|++||+|++|||+.+. ++.++..+|+... +.
T Consensus 21 ~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~-g~ 97 (124)
T 1wh1_A 21 EEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEE-NK 97 (124)
T ss_dssp CCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSS-CC
T ss_pred EEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCC-CC
Confidence 3456655443 469999986432222368999999999999999999999999999999998 5899999999854 35
Q ss_pred EEEEEEEeCCc
Q psy3479 143 VVKLTVVPCAP 153 (518)
Q Consensus 143 ~v~l~v~~~~~ 153 (518)
.|.|+|.|...
T Consensus 98 ~v~l~v~R~g~ 108 (124)
T 1wh1_A 98 NFSLLIARPEL 108 (124)
T ss_dssp SCCEEEEECSS
T ss_pred EEEEEEEECCE
Confidence 78888887653
No 270
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.08 E-value=2.2e-10 Score=92.60 Aligned_cols=62 Identities=18% Similarity=0.340 Sum_probs=53.3
Q ss_pred ccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 450 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 450 ~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.+|||++.... .....+++|.+|.++|||+++| |++||+|++|||+++.+++++++.++|++
T Consensus 20 ~~~Gf~v~~~~-~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~ 81 (94)
T 3kzd_A 20 DTYGFSLSSVE-EDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 81 (94)
T ss_dssp -CCSEEEEEEC-SSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS
T ss_pred CCcCEEEEecC-CCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 57999997432 1223479999999999999999 99999999999999999999999999975
No 271
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=5.7e-10 Score=95.61 Aligned_cols=83 Identities=18% Similarity=0.275 Sum_probs=67.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
.++|.|.|. ..+|||++.++.. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.++..+|+.. +.
T Consensus 20 ~~~v~l~~~-~~glG~~~~~g~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 96 (123)
T 1ueq_A 20 FLSTTLKKS-NMGFGFTIIGGDE--PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ 96 (123)
T ss_dssp EEEEEEECC-TTSCSEEEECCSS--SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred EEEEEEEeC-CCceeEEEecccC--CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 357888884 6789999986221 234799999999999999999999999999999999999999999999984 45
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 97 ~v~l~v~R 104 (123)
T 1ueq_A 97 SVNLVLCR 104 (123)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 55555444
No 272
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.06 E-value=2.5e-10 Score=90.90 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=62.3
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
+.|+|.+ ..+|||++.+ +.. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+..+
T Consensus 3 ~~v~l~~--~~~~G~~l~g---g~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 76 (85)
T 1rgw_A 3 YSVTLTG--PGPWGFRLQG---GKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNL 76 (85)
T ss_dssp EEEEECC--SSCCCEEECC---CGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCE
T ss_pred EEEEEeC--CCccCEEEEe---ccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeE
Confidence 4677743 4689999985 222 2368999999999999999 9999999999999999999999998887766654
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 77 ~l~v 80 (85)
T 1rgw_A 77 SLTL 80 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 273
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=6.1e-10 Score=91.69 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=67.4
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..++|.|.|....+|||++.+... ...+++|..|.++|||+++| |++||+|++|||.++.++++.++...++. +..
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSE--HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTT--TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred eEEEEEEEECCCCCccEEEEcccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 356789999777789999986321 12479999999999999999 99999999999999999888888888876 555
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 86 v~l~v~R 92 (100)
T 2eeh_A 86 LHMMVRR 92 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555444
No 274
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.05 E-value=2.7e-10 Score=109.97 Aligned_cols=84 Identities=24% Similarity=0.232 Sum_probs=72.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhh-cCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~-~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+.|.|.|..+++|||+|.++.. ...+++|..|.++|||++ +| |++||+|++|||+++.+++|.+++.+++..+..
T Consensus 78 ~r~V~L~k~~~~glGf~I~gg~d--~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 78 RRRVTVRKADAGGLGISIKGGRE--NKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp SEEECCCTTTTCCCCCEEEEETT--TTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred cEEEEEEeCCCCCEeEEEeeccC--CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 57899999777899999987221 123799999999999999 56 999999999999999999999999999999888
Q ss_pred CCeeEEEe
Q psy3479 427 MPTSMFRL 434 (518)
Q Consensus 427 v~~~v~r~ 434 (518)
+.+.+.|.
T Consensus 155 V~L~V~R~ 162 (263)
T 1z87_A 155 VVLEVKYM 162 (263)
T ss_dssp CCEEEECC
T ss_pred EEEEEEeC
Confidence 88887763
No 275
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.05 E-value=1e-09 Score=116.15 Aligned_cols=153 Identities=14% Similarity=0.141 Sum_probs=102.0
Q ss_pred CceeEEEEeCC-------CCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCCh--------HHHHHHHH-
Q psy3479 359 EILGVVIVESG-------WGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPL--------STCQTYIK- 421 (518)
Q Consensus 359 ~~lG~~i~~~~-------~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~--------~~~~~~l~- 421 (518)
.+||+++..-. .+.+ ..|++|..|.++|||++ + |+.||.|++|||+.+..... .....++.
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 57898887521 1222 23899999999999986 4 99999999999999964321 11223333
Q ss_pred -HhcCcCCeeEEEeeeecccceeccC------------CC--CccccEEEEecCC-------------------------
Q psy3479 422 -ILMKTMPTSMFRLLTGQETPVVVPK------------AK--GEILGVVIVESGW------------------------- 461 (518)
Q Consensus 422 -~~~~~v~~~v~r~~~~~~~~~~~~~------------~~--~~~lG~~i~~~g~------------------------- 461 (518)
..++.+.+.+.|-....+..+++.. .+ ...+|+.+.....
T Consensus 331 ~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (539)
T 4fln_A 331 KFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVAR 410 (539)
T ss_dssp SCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCS
T ss_pred CCCCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhc
Confidence 3566677777663222211111111 11 1235666542110
Q ss_pred CCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcCC
Q psy3479 462 GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 462 ~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~~ 516 (518)
.....+++|..|.|+++|+..| +++||+|++|||++|.++ .++.++|+++.+
T Consensus 411 ~~~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~ 462 (539)
T 4fln_A 411 FRGEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNI--HHLAHLIDMCKD 462 (539)
T ss_dssp STTCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSH--HHHHHHHHTCCS
T ss_pred cCCceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCH--HHHHHHHHHcCC
Confidence 0112378999999999999999 999999999999999665 899999988754
No 276
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.04 E-value=5.9e-10 Score=96.36 Aligned_cols=83 Identities=19% Similarity=0.236 Sum_probs=67.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
..+|.|.| ...+|||++.++.. ...+++|..|.++|+|+++|+|+.||+|++|||+++.+++|.++..+|+.+ +.
T Consensus 19 ~~~v~l~~-~~~g~G~~i~g~~~--~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~ 95 (129)
T 2kpk_A 19 FIHTKLRK-SSRGFGFTVVGGDE--PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 95 (129)
T ss_dssp EEEEEEEE-CSSCCSEEEEEEEE--TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred EEEEEEEE-CCCcccEEEeCccC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 35788888 46689999986221 123699999999999999999999999999999999999999999999987 44
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 96 ~v~l~v~R 103 (129)
T 2kpk_A 96 SVDLELCR 103 (129)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 45555544
No 277
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.04 E-value=4.7e-10 Score=92.13 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=65.5
Q ss_pred EEEEeCCCCCceeEEEEeCCC--CC---cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 350 EVVVPKAKGEILGVVIVESGW--GS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 350 ~V~L~k~~~~~lG~~i~~~~~--g~---~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
+|.|.| .+.+|||++..... +. ...+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++..+
T Consensus 5 ~v~l~~-~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 82 (99)
T 3khf_A 5 PIVIHS-SGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSG 82 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CEEEEe-CCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 577877 57899999985221 11 11267899999999999999 9999999999999999999999999999777
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 83 ~~v~l~v~r 91 (99)
T 3khf_A 83 NKISLRTTA 91 (99)
T ss_dssp SEEEEEEEC
T ss_pred CEEEEEEEE
Confidence 765555544
No 278
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.04 E-value=5.1e-10 Score=92.89 Aligned_cols=78 Identities=26% Similarity=0.265 Sum_probs=65.5
Q ss_pred cEEEEEeCCCCCceeEEEEeCCC-----CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGW-----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~-----g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
.+.+.|.|..+++|||+|.+... .....+++|..|.+++||+++| |++||+|++|||+++.+++++++..+++.
T Consensus 16 ~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 16 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 45788999777899999986211 1123489999999999999999 99999999999999999999999999998
Q ss_pred hcCc
Q psy3479 423 LMKT 426 (518)
Q Consensus 423 ~~~~ 426 (518)
.++.
T Consensus 95 ~~~~ 98 (104)
T 2z17_A 95 SGNL 98 (104)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 7554
No 279
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.04 E-value=9.4e-10 Score=88.83 Aligned_cols=79 Identities=23% Similarity=0.320 Sum_probs=64.0
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCcC-CcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSML-PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~~-~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
+.|.+.. ..+|||++.+ +... .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 5 ~~v~~~~--~~~~G~~l~~---~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 78 (91)
T 2pkt_A 5 QQIDLQG--PGPWGFRLVG---GKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNL 78 (91)
T ss_dssp EEEEEES--SSCCSEEEEE---EGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred EEEEECC--CCCCCEEEEc---cCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4566664 4689999986 2222 379999999999999999 9999999999999999999889999998866655
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 79 ~l~v~R 84 (91)
T 2pkt_A 79 TLTVAR 84 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555544
No 280
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=1.1e-09 Score=93.71 Aligned_cols=86 Identities=20% Similarity=0.349 Sum_probs=69.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCC--cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc-
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGS--MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM- 424 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~--~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~- 424 (518)
.++|.|.|....+|||+|.++.... ...+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+++...
T Consensus 16 ~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 95 (122)
T 1v5q_A 16 TTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSI 95 (122)
T ss_dssp EEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTT
T ss_pred eEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4689999976789999998632111 2236899999999999999999999999999999999989999999998873
Q ss_pred -CcCCeeEEE
Q psy3479 425 -KTMPTSMFR 433 (518)
Q Consensus 425 -~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 96 g~~v~l~v~R 105 (122)
T 1v5q_A 96 TSKVTLEIEF 105 (122)
T ss_dssp TTCEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 455555544
No 281
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.02 E-value=6.9e-10 Score=92.74 Aligned_cols=79 Identities=19% Similarity=0.227 Sum_probs=66.2
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|. ..+|||++.+ ..+++|..|.++|||+++| |+.||+|++|||.++.+++++++..+++..++.
T Consensus 23 ~~r~v~l~k~-~~~~G~~l~~------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~ 94 (109)
T 2vsv_A 23 MPRSIRFTAE-EGDLGFTLRG------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGED 94 (109)
T ss_dssp SCEEEEECCG-GGCCCEEEES------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTS
T ss_pred CCEEEEEEeC-CCceeEEEeC------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3578999994 6789999964 1257899999999999999 999999999999999999999999999877664
Q ss_pred -CCeeEEE
Q psy3479 427 -MPTSMFR 433 (518)
Q Consensus 427 -v~~~v~r 433 (518)
+.+.+.+
T Consensus 95 ~v~l~V~~ 102 (109)
T 2vsv_A 95 EIEMKVVS 102 (109)
T ss_dssp CEEEEEES
T ss_pred eEEEEEEE
Confidence 5555544
No 282
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.02 E-value=9.9e-10 Score=112.71 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=68.1
Q ss_pred EEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEE
Q psy3479 66 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVK 145 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~ 145 (518)
|.+.|. ++|||++.++. ..+++|..|.+||||+++| |++||+|++|||.++.++++++++.+|++...+..|+
T Consensus 13 v~~~k~--~~lG~~i~gg~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~ 85 (391)
T 3tsz_A 13 VKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 85 (391)
T ss_dssp EEEECC--SSCCEEEEEET----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEE
T ss_pred EEeecC--CceeEEEEecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEE
Confidence 445554 34999998654 3589999999999999999 9999999999999999999999999999743346899
Q ss_pred EEEEeCC
Q psy3479 146 LTVVPCA 152 (518)
Q Consensus 146 l~v~~~~ 152 (518)
|+|.|..
T Consensus 86 l~v~r~~ 92 (391)
T 3tsz_A 86 ILAQKKK 92 (391)
T ss_dssp EEEEECH
T ss_pred EEEeeCC
Confidence 9998764
No 283
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=91.13 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=61.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc--C
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM--K 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~--~ 425 (518)
.++|.|.|. ..+|||+|.++. .+.+|..|.+ ++..+| |++||+|++|||.++.+++|++++.+|+.+. .
T Consensus 13 ~~~V~L~Kg-~~G~GFsI~~~~-----~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~ 83 (113)
T 3soe_A 13 LVTIPLIKG-PKGFGFAIADSP-----TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGA 83 (113)
T ss_dssp EEEEEEECB-TTBSSEEEEEET-----TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTC
T ss_pred EEEEEEEEC-CCcccEEEeCCC-----CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 468999995 668999997532 2567999887 466777 9999999999999999999999999999863 3
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 84 ~v~L~V~R 91 (113)
T 3soe_A 84 DVPLLILR 91 (113)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 44455444
No 284
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.01 E-value=7.6e-10 Score=93.46 Aligned_cols=82 Identities=16% Similarity=0.224 Sum_probs=68.7
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
++++.|.+.....|||.+.. +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 14 p~~~~l~~~~~~~~G~~l~~---~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 89 (114)
T 2edz_A 14 PRECKLSKQEGQNYGFFLRI---EKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 89 (114)
T ss_dssp CEEEEEECCTTCCCSCEEEC---CTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEE
T ss_pred CEEEEEeCCCCCcccEEEEE---ecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 45788888777899999975 2233579999999999999999 9999999999999999999999999998876665
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 90 ~l~v~R 95 (114)
T 2edz_A 90 TLLVLD 95 (114)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 555544
No 285
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.01 E-value=3e-10 Score=106.82 Aligned_cols=82 Identities=22% Similarity=0.265 Sum_probs=69.8
Q ss_pred ceeEEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCc
Q psy3479 63 SDEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQT 142 (518)
Q Consensus 63 s~~v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~ 142 (518)
...|.|.|..++ |||.|.+... .++++|..|.++|||+++| |+.||+|++|||+.+.++++.+++.+|+..+ .
T Consensus 10 ~r~v~l~k~~~g-lG~~l~~~~~---~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g--~ 82 (216)
T 2krg_A 10 PRLCTMKKGPSG-YGFNLHSDKS---KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG--D 82 (216)
T ss_dssp CEEEEEECCSSS-SCEEECCCSS---SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHC--S
T ss_pred eEEEEEEeCCCC-ceEEEEecCC---CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC--C
Confidence 345888888765 9999975442 4589999999999999999 9999999999999999999999999999875 4
Q ss_pred EE-EEEEEeC
Q psy3479 143 VV-KLTVVPC 151 (518)
Q Consensus 143 ~v-~l~v~~~ 151 (518)
.| .|+|.|.
T Consensus 83 ~v~~l~V~R~ 92 (216)
T 2krg_A 83 ETKLLVVDRE 92 (216)
T ss_dssp EEEEEECCHH
T ss_pred eEEEEEEEEC
Confidence 67 7777654
No 286
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.01 E-value=1.3e-09 Score=88.97 Aligned_cols=83 Identities=22% Similarity=0.340 Sum_probs=65.8
Q ss_pred EEEEEeCCCCCceeEEEEeCCC----CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~----g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
..+.+.+. ..+|||+|.++.. .....+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 5 ~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 82 (97)
T 2w4f_A 5 LTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAG 82 (97)
T ss_dssp EEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCC
Confidence 46788885 7799999986321 1123589999999999999999 9999999999999999998888887777666
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 83 ~~v~l~v~R 91 (97)
T 2w4f_A 83 TAVQMRVWR 91 (97)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEEEe
Confidence 655554443
No 287
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.01 E-value=1.7e-09 Score=90.73 Aligned_cols=84 Identities=29% Similarity=0.419 Sum_probs=66.5
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC-CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g-~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
+.+.+.+. ..+|||++.+.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.. +.
T Consensus 13 ~~~~l~~~-~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 91 (111)
T 2koj_A 13 LNIQLKKG-TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEG 91 (111)
T ss_dssp EEEEEECB-TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSS
T ss_pred EEEEEEEC-CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 46777774 57899999863211 1124799999999999999999999999999999999999999999999875 44
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 92 ~v~l~v~R 99 (111)
T 2koj_A 92 TVSLLVFR 99 (111)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 44444433
No 288
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.01 E-value=1.7e-10 Score=91.59 Aligned_cols=76 Identities=20% Similarity=0.250 Sum_probs=63.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.++|.|.|. ..+|||++.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 3 ~r~v~l~~~-~~g~G~~~~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 74 (83)
T 2kv8_A 3 VRSVEVARG-RAGYGFTLSGQ------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVL 74 (83)
T ss_dssp EEEEEECCC-SSCCSCBCCCS------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCE
T ss_pred cEEEEEEeC-CCcccEEEEcC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 468999995 47899998641 258999999999999999 9999999999999999999999998887665554
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 75 ~l~v 78 (83)
T 2kv8_A 75 HMVI 78 (83)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 289
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.01 E-value=9.2e-10 Score=91.24 Aligned_cols=63 Identities=25% Similarity=0.397 Sum_probs=54.5
Q ss_pred ccccEEEEecCCCC-----------CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 450 EILGVVIVESGWGS-----------MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 450 ~~lG~~i~~~g~~~-----------~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+|||++. ++.+. ...+++|.+|.++|||+++| |++||+|++|||+++.+++|++++.+|+..
T Consensus 19 ~~lG~~i~-g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 92 (104)
T 3sfj_A 19 LILGFSIG-GGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKR 92 (104)
T ss_dssp EECSEEEE-ECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCT
T ss_pred CcccEEEE-CccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 47999998 33331 23479999999999999999 999999999999999999999999999863
No 290
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=7.8e-10 Score=91.07 Aligned_cols=81 Identities=21% Similarity=0.291 Sum_probs=65.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcC-CcEEEEEecCCChhhhc-CCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSML-PTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~-~g~~I~~V~~~s~A~~~-G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
.+.+.+.+....+|||++.+ +... .+++|..|.++|||+++ | |++||+|++|||.++.++ +.++..+++..+.
T Consensus 10 ~~~~~v~~~~~~~~G~~~~g---g~~~~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~ 84 (100)
T 2edp_A 10 FQYVPVQLQGGAPWGFTLKG---GLEHCEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGSFR 84 (100)
T ss_dssp CEEEEEECCSCSCCCCCEEE---EGGGTEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTCCS
T ss_pred cEEEEEEECCCCCcCEEEec---cCCCCCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhCCC
Confidence 34566666556789999986 2222 36899999999999999 6 999999999999999987 8889999987766
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 85 ~v~l~v~R 92 (100)
T 2edp_A 85 ILKLIVRR 92 (100)
T ss_dssp SCEEEEEE
T ss_pred eEEEEEEe
Confidence 66666554
No 291
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.00 E-value=1.1e-09 Score=89.73 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=62.9
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
.+.+.|.+. ..+|||++.+ +....+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++...+
T Consensus 10 ~~~~~l~~~-~~g~G~~~~~---~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (98)
T 2jxo_A 10 PRLCTMKKG-PSGYGFNLHS---DKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (98)
T ss_dssp CEEEEEECT-TTCCCEEEEC---CCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred cEEEEEEeC-CCcccEEEEe---cCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 467888885 5689999986 2234489999999999999999 99999999999999999889999999987644
No 292
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.00 E-value=1.4e-09 Score=88.32 Aligned_cols=78 Identities=24% Similarity=0.376 Sum_probs=63.1
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|. ..+|||++.+ ..+++|..|.++|||+++| |+.||+|++|||+++.++++.++...++ .+..
T Consensus 8 ~~r~v~l~~~-~~~~G~~l~~------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~ 78 (93)
T 2dls_A 8 VQRCVIIQKD-QHGFGFTVSG------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAY 78 (93)
T ss_dssp CEEEEEEECS-SSSCCEEEEC------SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSE
T ss_pred CCEEEEEEeC-CCceeEEEeC------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCE
Confidence 3578999985 5789999974 1368999999999999999 9999999999999999998888777765 4555
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 79 v~l~v~R 85 (93)
T 2dls_A 79 VALTLLG 85 (93)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 4444433
No 293
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=87.33 Aligned_cols=78 Identities=17% Similarity=0.108 Sum_probs=60.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~ 425 (518)
.++|.|.|. ..+|||++.+. ....+++|..+ ++|||+ +| |++||+|++|||.++.+++++++...++. .+.
T Consensus 4 ~~~v~l~k~-~~g~G~~~~~~---~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 4 LITVHIVKG-PMGFGFTIADS---PGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp EEEEEEECB-TTBSSCEEEEC---TTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred EEEEEEEcC-CCceeEEEEec---CCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 467899995 57899999862 22347889887 999999 88 99999999999999999999999999885 344
Q ss_pred cCCeeEE
Q psy3479 426 TMPTSMF 432 (518)
Q Consensus 426 ~v~~~v~ 432 (518)
.+.+.+.
T Consensus 77 ~v~l~v~ 83 (88)
T 3bpu_A 77 EVTLLVQ 83 (88)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 294
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.99 E-value=6.6e-10 Score=91.98 Aligned_cols=81 Identities=26% Similarity=0.358 Sum_probs=65.5
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC------CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g------~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
.+|.+.|. .+|||++.++..+ ....+++|..|.++|||++ | |++||+|++|||.++.++++.++...++.
T Consensus 13 ~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 88 (103)
T 1n7t_A 13 IRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 88 (103)
T ss_dssp EEEEEECS--SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEccC--CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 56788884 4899999973211 1344899999999999999 8 99999999999999999999999999987
Q ss_pred hcCcCCeeEEE
Q psy3479 423 LMKTMPTSMFR 433 (518)
Q Consensus 423 ~~~~v~~~v~r 433 (518)
.+..+.+.+.|
T Consensus 89 ~g~~v~l~v~R 99 (103)
T 1n7t_A 89 FQNTVELIIVR 99 (103)
T ss_dssp CCSEEEEEEEC
T ss_pred CCCeEEEEEEe
Confidence 77665555543
No 295
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.99 E-value=2.9e-09 Score=89.52 Aligned_cols=82 Identities=32% Similarity=0.410 Sum_probs=66.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCC-CCCCEEEEEcCeeccCCChHHHHHHHHHhc-C
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL-NIGDQIIAVNGVSLVGLPLSTCQTYIKILM-K 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l-~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~-~ 425 (518)
..+|.|.|....+|||++... ....+++|..|.++|||+++| + +.||+|++|||.++.+++++++..+++... .
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~---~~~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 77 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKER---VSKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 77 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEEC---SSSSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSS
T ss_pred EEEEEEEcCCCCceeEEEEec---CCCCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 357899887778999999862 224579999999999999999 6 999999999999999988999999998753 3
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 78 ~v~l~v~R 85 (112)
T 1qau_A 78 THVVLILR 85 (112)
T ss_dssp SEEEEEEE
T ss_pred cEEEEEEe
Confidence 44444433
No 296
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.98 E-value=5.1e-10 Score=94.77 Aligned_cols=83 Identities=30% Similarity=0.389 Sum_probs=67.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.+.|.+. ..+|||++.++. .....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.....+
T Consensus 18 ~~~v~l~~~-~~glG~~l~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 95 (116)
T 2dm8_A 18 EMIIEISKG-RSGLGLSIVGGK-DTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKV 95 (116)
T ss_dssp CEEEEEECC-SSCCCCCCBCCT-TSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEE
T ss_pred EEEEEEEEC-CCcccEEEeCCC-CCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 467888884 678999997522 111248999999999999999999999999999999999999999999998766554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 96 ~l~v~ 100 (116)
T 2dm8_A 96 RLVVY 100 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 297
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.98 E-value=1.9e-09 Score=88.01 Aligned_cols=84 Identities=24% Similarity=0.326 Sum_probs=66.2
Q ss_pred EEEEEeCCCCCceeEEEEeCCCC--CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWG--SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g--~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++.|.+ ...+|||++.+.... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..+..
T Consensus 6 ~~v~l~~-~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 84 (97)
T 2iwn_A 6 FDVELTK-NVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQT 84 (97)
T ss_dssp EEEEEEC-BTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred EEEEEec-CCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4677877 467899999862110 1234799999999999999999999999999999999999999999888876665
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 85 v~l~v~r 91 (97)
T 2iwn_A 85 VLLTLMR 91 (97)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555543
No 298
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.98 E-value=9e-10 Score=89.57 Aligned_cols=62 Identities=23% Similarity=0.320 Sum_probs=54.0
Q ss_pred CCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 447 AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 447 ~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
....++||.+... ..+++|.+|.++|||+++| |++||+|++|||.++...+|+|+..+|+++
T Consensus 25 ~~~~g~G~~l~~~-----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~ 86 (101)
T 3qik_A 25 PQEEDYGFDIEEK-----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQS 86 (101)
T ss_dssp CCSSSSSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred eCCCcccEEEEcc-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHh
Confidence 3467899999732 2357999999999999999 999999999999999888999999999873
No 299
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.98 E-value=4e-10 Score=91.68 Aligned_cols=81 Identities=21% Similarity=0.250 Sum_probs=64.0
Q ss_pred EEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCe
Q psy3479 350 EVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPT 429 (518)
Q Consensus 350 ~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~ 429 (518)
.+.+.+....+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.....+.+
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~--~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 83 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRD--FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRL 83 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETT--TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEE
T ss_pred EEEEEecCCCCccEEEecccC--CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 345555556799999986221 12378999999999999999 999999999999999999999999999876655444
Q ss_pred eEEE
Q psy3479 430 SMFR 433 (518)
Q Consensus 430 ~v~r 433 (518)
.+.|
T Consensus 84 ~v~R 87 (94)
T 1vb7_A 84 QLDR 87 (94)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 4433
No 300
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.98 E-value=1.3e-09 Score=100.84 Aligned_cols=83 Identities=25% Similarity=0.313 Sum_probs=69.7
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
..+.|.|.|..+.+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.+++|.++..+++. +..
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~--~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~ 159 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLE--FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EKT 159 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGG--GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SSE
T ss_pred ceEEEEEEeCCCCceeEEEEcccc--cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CCe
Confidence 357899999877899999986211 12379999999999999999 99999999999999999999999999987 666
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 160 v~l~v~r 166 (192)
T 3k1r_A 160 VSIKVRH 166 (192)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 301
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=2.6e-09 Score=89.51 Aligned_cols=83 Identities=22% Similarity=0.340 Sum_probs=67.1
Q ss_pred EEEEEeCCCCCceeEEEEeCCC----CCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGW----GSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILM 424 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~----g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~ 424 (518)
+.+.+.+. ..+|||+|.++.. .....+++|..|.++|||+++| |++||+|++|||+++.++++.++...++..+
T Consensus 17 ~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 94 (110)
T 1x5q_A 17 LTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAG 94 (110)
T ss_dssp EEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred EEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCC
Confidence 46788885 7799999986321 1123589999999999999999 9999999999999999999988888887766
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 95 ~~v~l~v~R 103 (110)
T 1x5q_A 95 TAVQMRVWR 103 (110)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 665555544
No 302
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=8.4e-10 Score=89.75 Aligned_cols=80 Identities=23% Similarity=0.166 Sum_probs=63.6
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.+ ..+|||++.++.. ...+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+..+
T Consensus 9 ~~~v~l~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 9 PHSVTLRG--PSPWGFRLVGGRD--FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp CEEEEECC--SSCCSCCEECCTT--TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred eEEEEEeC--CCccCEEEECccC--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 45778844 4689999986221 12468999999999999999 9999999999999999998999998888765554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 84 ~l~v~ 88 (94)
T 2eeg_A 84 TLSVS 88 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 303
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.51 E-value=6.5e-11 Score=99.70 Aligned_cols=81 Identities=27% Similarity=0.360 Sum_probs=67.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhh-cCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAAR-CGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~-~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.+.|.|.|..+.+|||++.++.. ...+++|..|.++|||++ +| |++||+|++|||.++.++++.++..+++..++.
T Consensus 28 ~~~v~l~k~~~~glG~~l~~g~~--~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 104 (112)
T 2lob_A 28 IRKVLLLKEDHEGLGISITGGKE--HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 104 (112)
Confidence 46788988777899999986211 123789999999999999 77 999999999999999998999999999877766
Q ss_pred CCeeE
Q psy3479 427 MPTSM 431 (518)
Q Consensus 427 v~~~v 431 (518)
+.+.+
T Consensus 105 v~l~V 109 (112)
T 2lob_A 105 IEFEV 109 (112)
Confidence 55544
No 304
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=8.6e-10 Score=91.22 Aligned_cols=82 Identities=26% Similarity=0.274 Sum_probs=66.8
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMP 428 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~ 428 (518)
+.+.|.+. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..+..+.
T Consensus 13 ~~v~l~~~-~~g~G~~~~~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 13 FTVDMEKG-AKGFGFSIRGGRE--YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp EECCEECC-TTSSSBCCEEETT--TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred EEEEEecC-CCcCCEEEecccc--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 46777774 4679999986221 12379999999999999999999999999999999999999999999987777666
Q ss_pred eeEEE
Q psy3479 429 TSMFR 433 (518)
Q Consensus 429 ~~v~r 433 (518)
+.+.|
T Consensus 90 l~v~R 94 (103)
T 1wfv_A 90 LLLKR 94 (103)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 65544
No 305
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=1.1e-09 Score=90.72 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=63.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
..+|.|.. ..+|||+|.++.. ...+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+
T Consensus 6 ~~~v~l~~--~~~~G~~l~gg~~--~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 80 (103)
T 1wf7_A 6 SGSVSLVG--PAPWGFRLQGGKD--FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 80 (103)
T ss_dssp CEEEEEES--SSCCSCCEEEETT--TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEE
T ss_pred EEEEEEeC--CCccCEEEecccc--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35677774 5789999987221 12258999999999999999 9999999999999999999999998888776654
Q ss_pred CeeE
Q psy3479 428 PTSM 431 (518)
Q Consensus 428 ~~~v 431 (518)
.+.+
T Consensus 81 ~l~v 84 (103)
T 1wf7_A 81 NMTL 84 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 306
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.94 E-value=4.5e-09 Score=89.66 Aligned_cols=83 Identities=29% Similarity=0.403 Sum_probs=65.6
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCC-cCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGS-MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~-~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
+.+.|.+ ...+|||+|.+..... ...+++|..|.++|||+++|+|++||+|++|||+++.+++++++..+++.. +.
T Consensus 32 ~~v~l~~-~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~ 110 (121)
T 2kom_A 32 LNIQLKK-GTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEG 110 (121)
T ss_dssp EEEEEEC-CTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSC
T ss_pred EEEEEEc-CCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Confidence 4677777 4678999998632111 124799999999999999999999999999999999999999999999875 44
Q ss_pred cCCeeEE
Q psy3479 426 TMPTSMF 432 (518)
Q Consensus 426 ~v~~~v~ 432 (518)
.+.+.+.
T Consensus 111 ~v~l~v~ 117 (121)
T 2kom_A 111 TVSLLVF 117 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 307
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.94 E-value=1.8e-09 Score=91.73 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=63.6
Q ss_pred cCCcceeEEEEecCC-cCCCCcEEEEEecC--CChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEE
Q psy3479 71 AKGEILGVVIVESGW-GSMLPTVVIANLAP--AGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLT 147 (518)
Q Consensus 71 ~~~~~lG~~l~~~~~-~~~~~~~~V~~v~~--gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~ 147 (518)
...+.+||.|.-... .....+++|..|.+ ++||+++| |++||+|++|||+.+.+++|+++..+|+..+ ..|.|+
T Consensus 24 ~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g--~~v~l~ 100 (118)
T 2yub_A 24 TTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTS--QTLQLL 100 (118)
T ss_dssp CSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCS--SCEEEE
T ss_pred ccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCC--CEEEEE
Confidence 333446666653221 12246899999999 99999999 9999999999999999999999999999873 588999
Q ss_pred EEeCCc
Q psy3479 148 VVPCAP 153 (518)
Q Consensus 148 v~~~~~ 153 (518)
|.|...
T Consensus 101 v~R~g~ 106 (118)
T 2yub_A 101 IEHDPV 106 (118)
T ss_dssp EEECSS
T ss_pred EEECCE
Confidence 987653
No 308
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=5.4e-10 Score=94.09 Aligned_cols=81 Identities=22% Similarity=0.316 Sum_probs=67.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.|. ..+|||+|.++ ....+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+..+
T Consensus 16 ~~~v~l~k~-~~glG~~l~~~---~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v 91 (113)
T 1um7_A 16 PRKIILHKG-STGLGFNIVGG---EDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSV 91 (113)
T ss_dssp EEEEEEECC-SSCSSBCCBCC---STTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEE
T ss_pred eEEEEEEEC-CCcccEEEEec---cCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 578999995 57899999752 22457899999999999999999999999999999999999999998888766554
Q ss_pred CeeEE
Q psy3479 428 PTSMF 432 (518)
Q Consensus 428 ~~~v~ 432 (518)
.+.+.
T Consensus 92 ~l~v~ 96 (113)
T 1um7_A 92 TIVAQ 96 (113)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 309
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=5.7e-09 Score=84.04 Aligned_cols=72 Identities=24% Similarity=0.392 Sum_probs=58.5
Q ss_pred EEEEeC-CCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCC
Q psy3479 350 EVVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMP 428 (518)
Q Consensus 350 ~V~L~k-~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~ 428 (518)
.+.+.+ ....+|||.+.+ | +|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 14 ~~~i~~~~~~~~lG~~~~~--------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~ 83 (90)
T 1y7n_A 14 TVLIRRPDLRYQLGFSVQN--------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIH 83 (90)
T ss_dssp EEEEEESSTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEE
T ss_pred eEEEEeCCCccccCeEecC--------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 344433 346789999853 2 899999999999999 99999999999999998899999999987665544
Q ss_pred eeE
Q psy3479 429 TSM 431 (518)
Q Consensus 429 ~~v 431 (518)
+.+
T Consensus 84 l~v 86 (90)
T 1y7n_A 84 MKT 86 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 310
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.9e-09 Score=87.74 Aligned_cols=66 Identities=26% Similarity=0.295 Sum_probs=55.7
Q ss_pred CCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcCC
Q psy3479 448 KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 516 (518)
Q Consensus 448 ~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~~ 516 (518)
...+|||.+... .. ...+++|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++....
T Consensus 19 ~~~~lG~~~~~~-~~-~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 84 (101)
T 1uez_A 19 AHEGLGFSIRGG-SE-HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGSKK 84 (101)
T ss_dssp TTTCSSEEEEEC-TT-TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSSSS
T ss_pred CCCcccEEEeCC-CC-CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCCCe
Confidence 457899999732 21 23479999999999999999 99999999999999999999999988876543
No 311
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.89 E-value=5.4e-09 Score=88.13 Aligned_cols=73 Identities=30% Similarity=0.454 Sum_probs=62.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
.++|.+.+....+|||++.++. ....+++|..|.++++|+++| |++||+|++|||.++.++++.++..+++..
T Consensus 16 ~~~v~~~~~~~~~lG~~l~~~~--~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 16 EKKVFISLVGSRGLGCSISSGP--IQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp SEEEEECCCSSCCCCEEEEECC--SSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred cEEEEEEEcCCCceeEEEeecC--CCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 3678887777889999998632 123479999999999999999 999999999999999999888888888764
No 312
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=9.6e-10 Score=89.82 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=66.1
Q ss_pred cEEEEEeCCCC-CceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc
Q psy3479 348 QKEVVVPKAKG-EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT 426 (518)
Q Consensus 348 ~~~V~L~k~~~-~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~ 426 (518)
.++|+|.|... .+|||.+.+ ..+++|..|.++|||+ +| |++||+|++|||+++.++++.++..+++..+..
T Consensus 9 ~~~v~l~~~~~~~~~G~~l~~------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~ 80 (96)
T 2edv_A 9 RHTVKIDKDTLLQDYGFHISE------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAEDS 80 (96)
T ss_dssp EEEEEECCCSSSCSCSBCCCS------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSC
T ss_pred cEEEEEEECCCCCcccEEEec------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46899999654 489999964 2368999999999995 77 999999999999999999999999999987777
Q ss_pred CCeeEEE
Q psy3479 427 MPTSMFR 433 (518)
Q Consensus 427 v~~~v~r 433 (518)
+.+.+.|
T Consensus 81 v~l~v~R 87 (96)
T 2edv_A 81 LSITVVR 87 (96)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6666655
No 313
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.89 E-value=3.5e-09 Score=92.59 Aligned_cols=62 Identities=26% Similarity=0.401 Sum_probs=53.9
Q ss_pred ccccEEEEecCCC-----------CCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 450 EILGVVIVESGWG-----------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 450 ~~lG~~i~~~g~~-----------~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
..|||.+. ++.+ ....+++|.+|.++|||+++| |++||+|++|||+++.++++++++++|+.
T Consensus 38 ~~lG~~i~-~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 110 (139)
T 2vz5_A 38 LILGFSIG-GGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTK 110 (139)
T ss_dssp EECSEEEE-ECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCC
T ss_pred ccccEEEE-ccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 47999997 3332 113589999999999999999 99999999999999999999999999986
No 314
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=1e-09 Score=90.84 Aligned_cols=66 Identities=24% Similarity=0.348 Sum_probs=55.9
Q ss_pred CCCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcC
Q psy3479 447 AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNH 515 (518)
Q Consensus 447 ~~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~ 515 (518)
.....|||.+.. +.+ ...+++|.+|.++|||+++| |++||+|++|||+++.++++++++++|+..+
T Consensus 12 ~~~~~lG~~l~~-g~~-~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 77 (103)
T 1v5l_A 12 PGPAPWGFRLSG-GID-FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAAS 77 (103)
T ss_dssp ESSSCCSBCCEE-ETT-TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCC
T ss_pred cCCCCcCEEEec-ccc-CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345689999973 222 12368999999999999999 9999999999999999999999999998764
No 315
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=2.9e-09 Score=89.74 Aligned_cols=73 Identities=16% Similarity=0.300 Sum_probs=60.2
Q ss_pred cEEEEEeCCCCC--ceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH
Q psy3479 348 QKEVVVPKAKGE--ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI 422 (518)
Q Consensus 348 ~~~V~L~k~~~~--~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~ 422 (518)
.+.+.|.|.... +|||+|.+... ....+++|..|.++|||+++| |++||+|++|||.++.+++|.++..+++.
T Consensus 16 ~~~v~l~k~~~~~~~~G~~v~~~~~-~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 16 TQSIHIEKSDTAADTYGFSLSSVEE-DGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp EEEEEEECSCTTTCCCCCEEEEEEE-TTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred eEEEEEEeCCCCccccCEEEEecCc-CCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 578999996553 79999985111 011479999999999999999 99999999999999999888898888874
No 316
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=2.3e-09 Score=91.83 Aligned_cols=80 Identities=24% Similarity=0.356 Sum_probs=65.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
.+++.|.+ ...+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+.+|+++..+|+.. +.
T Consensus 28 ~~~~~l~k-~~~glG~~i~~~-----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 28 VIQTKLTV-GNLGLGLVVIQN-----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGT 101 (126)
T ss_dssp EEEEEEEC-CTTCCCCCEEEE-----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSC
T ss_pred eEEEEEec-CCceEeEEEEcC-----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Confidence 45778888 467899999751 24689999999999999999999999999999999988999999999863 34
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 102 ~v~l~V~R 109 (126)
T 1wif_A 102 VLQIKAYR 109 (126)
T ss_dssp EEEEEEES
T ss_pred EEEEEEEE
Confidence 44444433
No 317
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=6.5e-10 Score=95.64 Aligned_cols=82 Identities=27% Similarity=0.398 Sum_probs=65.2
Q ss_pred cEEEEEeCCCCCceeEEEEeC-------------------CCCC-------cCCcEEEEEecCCChhhhcCCCCCCCEEE
Q psy3479 348 QKEVVVPKAKGEILGVVIVES-------------------GWGS-------MLPTVVIANLAPAGAAARCGQLNIGDQII 401 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~-------------------~~g~-------~~~g~~I~~V~~~s~A~~~G~l~~GD~Il 401 (518)
++.|.|.|. ..+|||+|.+. .++. ...+++|..|.++|||+++| |++||+|+
T Consensus 9 ~r~v~l~r~-~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~ 86 (126)
T 2yuy_A 9 PKTVTLKRT-SQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRII 86 (126)
T ss_dssp CCCEEEECC-SSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCC
T ss_pred CEEEEEEEC-CCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEE
Confidence 568999995 56899999741 1100 12368999999999999999 99999999
Q ss_pred EEcCeeccCCChHHHHHHHHHhcCcCCeeE
Q psy3479 402 AVNGVSLVGLPLSTCQTYIKILMKTMPTSM 431 (518)
Q Consensus 402 ~Vng~~v~~~s~~~~~~~l~~~~~~v~~~v 431 (518)
+|||+++.+++++++..+|+..+..+.+.+
T Consensus 87 ~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 116 (126)
T 2yuy_A 87 KVNGESVIGKTYSQVIALIQNSDTTLELSV 116 (126)
T ss_dssp EETTEECSSCCHHHHHHHHHTCTTEEEEEC
T ss_pred EECCEECCCCCHHHHHHHHHcCCCEEEEEE
Confidence 999999999999999999997655444333
No 318
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=4.7e-09 Score=88.95 Aligned_cols=77 Identities=25% Similarity=0.366 Sum_probs=62.4
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.+. ..+|||++.... ..+++|..|.+++||+++| |++||+|++|||+++.++++.++...++..+..+
T Consensus 20 ~~~v~l~~~-~~~lG~~~~~~~----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v 93 (117)
T 1uit_A 20 PRHVKVQKG-SEPLGISIVSGE----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTI 93 (117)
T ss_dssp CEEEEEECS-SCCCCEEEEECT----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEE
T ss_pred CEEEEEEeC-CCCccEEEEccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 467899885 578999998622 2479999999999999999 9999999999999999998888776665555544
Q ss_pred Cee
Q psy3479 428 PTS 430 (518)
Q Consensus 428 ~~~ 430 (518)
.+.
T Consensus 94 ~l~ 96 (117)
T 1uit_A 94 TIL 96 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 319
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.84 E-value=1.8e-08 Score=80.95 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=60.9
Q ss_pred EEEEeCCCC--CceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcC
Q psy3479 350 EVVVPKAKG--EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMK 425 (518)
Q Consensus 350 ~V~L~k~~~--~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~ 425 (518)
.+.+.+.++ .+|||++... ..+++|..|.++|||+++| |++||+|++|||.++.+.++.+...++.. .+.
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~-----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 79 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWD-----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETG 79 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEE-----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCCcccEEEEec-----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCC
Confidence 456665444 3799998641 2479999999999999999 99999999999999977789999988875 355
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 80 ~v~l~v~R 87 (90)
T 2eaq_A 80 HLVMDVRR 87 (90)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 55555443
No 320
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.84 E-value=2.4e-09 Score=88.07 Aligned_cols=77 Identities=16% Similarity=0.230 Sum_probs=63.8
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCC
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMP 428 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~ 428 (518)
+.+.|.+. ..+|||.+... .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++...+.+.
T Consensus 17 ~~v~l~~~-~~g~G~~~~~~------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 88 (100)
T 1whd_A 17 LQITIRRG-KDGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 88 (100)
T ss_dssp EEEEEECC-SSSSSCBCCCS------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEE
T ss_pred EEEEEECC-CCeeeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 46788874 56899998641 358999999999999999 99999999999999999999999999988766554
Q ss_pred eeEEE
Q psy3479 429 TSMFR 433 (518)
Q Consensus 429 ~~v~r 433 (518)
+.+.|
T Consensus 89 l~v~R 93 (100)
T 1whd_A 89 LLVWR 93 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 321
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.84 E-value=1.5e-08 Score=86.85 Aligned_cols=77 Identities=22% Similarity=0.271 Sum_probs=60.8
Q ss_pred EEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCc
Q psy3479 349 KEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKT 426 (518)
Q Consensus 349 ~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~ 426 (518)
+.+.+.+ +.+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.+++++++..++.. .+..
T Consensus 31 ~~~~~~~--~~~lG~~l~~~~----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 103 (124)
T 3tsv_A 31 KLVKFRK--GDSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 103 (124)
T ss_dssp EEEEEEC--SSCCCEEEEECT----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCE
T ss_pred EEEEcCC--CCceeEEEecCC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCE
Confidence 3344444 578999998622 2579999999999999999 99999999999999999999999998885 4444
Q ss_pred CCeeEE
Q psy3479 427 MPTSMF 432 (518)
Q Consensus 427 v~~~v~ 432 (518)
+.+.+.
T Consensus 104 v~l~v~ 109 (124)
T 3tsv_A 104 VTILAQ 109 (124)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 322
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.84 E-value=1.1e-08 Score=82.55 Aligned_cols=60 Identities=23% Similarity=0.449 Sum_probs=53.4
Q ss_pred CCccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcC
Q psy3479 448 KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNH 515 (518)
Q Consensus 448 ~~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~ 515 (518)
....|||.+. .+++|.+|.++|||+++|+|++||+|++|||+++.+++++++.++|+..+
T Consensus 13 ~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 72 (92)
T 3cyy_A 13 KNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK 72 (92)
T ss_dssp TTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3467888874 26899999999999999999999999999999999999999999998754
No 323
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.82 E-value=1.9e-08 Score=86.58 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=63.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~ 425 (518)
.+.+.|.+. ..+|||++.. +....+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+++...+
T Consensus 10 ~r~v~l~~~-~~g~G~~l~~---~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 82 (128)
T 2kjd_A 10 PRLCTMKKG-PSGYGFNLHS---DKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (128)
T ss_dssp CEEEEEECC-SSSCCEEEEE---CSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCS
T ss_pred cEEEEEecC-CCcccEEEEe---cCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 578899985 5689999986 2234589999999999999999 99999999999999999889999999987643
No 324
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=2.7e-08 Score=81.06 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=61.0
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~ 425 (518)
.+.+.|.|. ..+|||+|.+.. .|++|..|.++ |+++| |++||+|++|||+++.+++|+++..+|+.. +.
T Consensus 11 ~~~v~l~~~-~~g~G~~i~~~~-----~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 81 (96)
T 1ujv_A 11 LMTLTIVKG-AQGFGFTIADSP-----TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGS 81 (96)
T ss_dssp CEEEEEECC-SSSSSEEEEEET-----TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTS
T ss_pred EEEEEEEeC-CCceeEEEEcCC-----CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 357889884 578999997522 26899999983 67888 999999999999999999999999999985 34
Q ss_pred cCCeeEE
Q psy3479 426 TMPTSMF 432 (518)
Q Consensus 426 ~v~~~v~ 432 (518)
.+.+.+.
T Consensus 82 ~v~l~v~ 88 (96)
T 1ujv_A 82 ETSLIIH 88 (96)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 325
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.80 E-value=1.4e-08 Score=93.93 Aligned_cols=73 Identities=25% Similarity=0.372 Sum_probs=62.6
Q ss_pred CceeEEEEeCCCC------CcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCeeEE
Q psy3479 359 EILGVVIVESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPTSMF 432 (518)
Q Consensus 359 ~~lG~~i~~~~~g------~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~~v~ 432 (518)
.+|||+|.++..+ ....|++|..|.++|||++ | |++||+|++|||+++.+++|.+++.+++..+..+.+.+.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 5799999984321 1235899999999999999 8 999999999999999999999999999998887777776
Q ss_pred E
Q psy3479 433 R 433 (518)
Q Consensus 433 r 433 (518)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 6
No 326
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.80 E-value=6.3e-09 Score=89.53 Aligned_cols=73 Identities=33% Similarity=0.404 Sum_probs=63.3
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCC-CCCCEEEEEcCeeccCCChHHHHHHHHHh
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL-NIGDQIIAVNGVSLVGLPLSTCQTYIKIL 423 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l-~~GD~Il~Vng~~v~~~s~~~~~~~l~~~ 423 (518)
..+.|.|.|....+|||++.... ...+++|..|.++|||+++| | +.||+|++|||.++.+++++++..+++..
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~---~~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERV---SKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECT---TSSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSC
T ss_pred ceEEEEEEeCCCCcEeEEEEecC---CCCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35789999976689999998622 23579999999999999999 6 99999999999999998899999999864
No 327
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=1.1e-08 Score=88.10 Aligned_cols=64 Identities=30% Similarity=0.471 Sum_probs=54.6
Q ss_pred CccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhcC
Q psy3479 449 GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNH 515 (518)
Q Consensus 449 ~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~~ 515 (518)
...|||.+.. +. ....+++|.+|.++|||+++| |++||+|++|||+++.++++.+++++++...
T Consensus 31 ~~~lG~~~~~-~~-~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 94 (128)
T 1uf1_A 31 GRSLGLTIRG-GA-EYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSSR 94 (128)
T ss_dssp SCCCCEEEEC-CT-TTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS
T ss_pred CCccCEEEEC-cc-cCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 3679999973 22 123478999999999999999 9999999999999999999999999998754
No 328
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=98.78 E-value=9.2e-10 Score=99.64 Aligned_cols=62 Identities=56% Similarity=0.817 Sum_probs=42.6
Q ss_pred cccchhhhhhhhccccccceeeecCcEEEEEEeecCCCCC---CCC----CCCCCCCCcccccccccee
Q psy3479 4 FNDRVHKEIMMDHALRTISYIADIGDLVVLMARRRFVSQE---ADE----PPKISRTPKMICHVFESDE 65 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~---~~~----~~~~~~~~~~~~~vf~s~~ 65 (518)
+-|.-|||+||+|||+.|||+||+++++.+|||++..+.+ +.+ .....+.+++.||||++++
T Consensus 77 v~d~~t~~il~~~~l~~ISf~aD~~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF~s~~ 145 (172)
T 1aqc_A 77 VLNADTQETMMDHPLRTISYIADIGNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVFESED 145 (172)
T ss_dssp EEETTTCCEEEEEEGGGEEEEEEETTEEEEEECCC----------------------CEEEEEEEECTT
T ss_pred EEeCCCCceEeccccceEEEEeeCCcEEEEEecCCCccccccccccccccccccCCCCcEEEEEEECcc
Confidence 3355689999999999999999999999999999874322 111 1223456899999999764
No 329
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=3.7e-09 Score=88.72 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=65.8
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCc-
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKT- 426 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~- 426 (518)
.+.|.|.| ...+|||++.+. .+++|..|.+++||+++| |+.||+|++|||.++.+++|+++..+++...+.
T Consensus 16 ~r~v~l~~-~~~~~G~~l~~~------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~ 87 (111)
T 1vae_A 16 PRGIHFTV-EEGDLGFTLRGN------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEE 87 (111)
T ss_dssp CCCCCEEC-CSSCCSCCEESS------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSE
T ss_pred CeEEEEEc-CCCcccEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCce
Confidence 35688888 467899999641 257899999999999999 999999999999999999999999999877654
Q ss_pred CCeeEEEe
Q psy3479 427 MPTSMFRL 434 (518)
Q Consensus 427 v~~~v~r~ 434 (518)
+.+.+.+.
T Consensus 88 v~l~V~~~ 95 (111)
T 1vae_A 88 VEMKVVSL 95 (111)
T ss_dssp ECEEEECE
T ss_pred EEEEEEec
Confidence 56666553
No 330
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.77 E-value=1.7e-09 Score=113.21 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=54.9
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEeeC---CCC--
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIKR---PDT-- 164 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~r---p~~-- 164 (518)
.+++|..|.++|||+++| |++||.|++|||+.+... .+...+|.....+..|+|+|.|.....++.+.. +..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~ 362 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQV 362 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCccc
Confidence 489999999999999999 999999999999999887 577788876543468999998875443333221 110
Q ss_pred ------ccccceEecCCCCCCCCCCCCCcccccccccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhH
Q psy3479 165 ------KYQLGFSVQNGVAPEGETQPSTEVDLFISTEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMM 238 (518)
Q Consensus 165 ------~~~~g~~v~~~~~~~~~~~P~~~~~~~~s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~ 238 (518)
..-+|+.+..- ....|++|..+. |+++|+.. +|+.||.|++|||..+.+ .
T Consensus 363 ~~~~~~~~~~G~~l~~~------------------~~~~gv~V~~V~-~gspA~~a---GL~~GDiI~~vng~~v~~--~ 418 (448)
T 1ky9_A 363 DSSSIFNGIEGAEMSNK------------------GKDQGVVVNNVK-TGTPAAQI---GLKKGDVIIGANQQAVKN--I 418 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccceEeecc------------------CCCCeEEEEEec-CCCHHHHc---CCCCCCEEEEECCEECCC--H
Confidence 00012222110 011578999998 99999877 699999999999999874 4
Q ss_pred HHHHHHhhcc
Q psy3479 239 DHALRTISYI 248 (518)
Q Consensus 239 ~eav~~lk~~ 248 (518)
++..+.++..
T Consensus 419 ~~l~~~l~~~ 428 (448)
T 1ky9_A 419 AELRKVLDSK 428 (448)
T ss_dssp ----------
T ss_pred HHHHHHHHcC
Confidence 5666666543
No 331
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.77 E-value=3e-08 Score=77.76 Aligned_cols=72 Identities=21% Similarity=0.373 Sum_probs=58.8
Q ss_pred EEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcCCeeE
Q psy3479 352 VVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTMPTSM 431 (518)
Q Consensus 352 ~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v~~~v 431 (518)
.+.+.....|||.+.. +++|..|.++|||+++|.|++||+|++|||.++.++++.++..+++...+.+.+.+
T Consensus 6 ~~~~~~~~~~g~~~~~--------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 77 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLAS--------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 77 (81)
T ss_dssp EECCSTTCCCCEEEEE--------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEE
T ss_pred EEECCCCCCCCEEEeC--------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEE
Confidence 3444456789998852 58999999999999999999999999999999999999999999887555433333
No 332
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.71 E-value=3e-08 Score=103.22 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=67.3
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMK 425 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~ 425 (518)
.+.|.|.|. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++++++.+|+. .+.
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEET----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceEEEEecC--CccceEEEccC----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 467889883 78999998632 3589999999999999999 99999999999999999999999999998 566
Q ss_pred cCCeeEEE
Q psy3479 426 TMPTSMFR 433 (518)
Q Consensus 426 ~v~~~v~r 433 (518)
.+.+.+.|
T Consensus 75 ~v~L~V~r 82 (468)
T 3shw_A 75 EVTILAQK 82 (468)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 65555544
No 333
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=95.22 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=64.1
Q ss_pred cEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 348 QKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 348 ~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
.+.|.|.+. ..+|||+|.+ +....+++|..|.++++|+++| |+.||+|++|||..+.++++.++..+++..+..+
T Consensus 10 ~r~v~l~k~-~~glG~~l~~---~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v 84 (216)
T 2krg_A 10 PRLCTMKKG-PSGYGFNLHS---DKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (216)
T ss_dssp CEEEEEECC-SSSSCEEECC---CSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEE
T ss_pred eEEEEEEeC-CCCceEEEEe---cCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 578899985 5689999975 2233479999999999999999 9999999999999999999999999998775543
No 334
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.66 E-value=5.4e-08 Score=99.80 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=66.6
Q ss_pred ccEEEEEeCCCCCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hc
Q psy3479 347 LQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LM 424 (518)
Q Consensus 347 ~~~~V~L~k~~~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~ 424 (518)
..+.|.+.|. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.+++++++..+++. .+
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g 81 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGN----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKG 81 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEET----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred CcEEEEeecC--CceeEEEEecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCC
Confidence 3567888884 46999998622 3589999999999999999 99999999999999999999999999986 55
Q ss_pred CcCCeeEEE
Q psy3479 425 KTMPTSMFR 433 (518)
Q Consensus 425 ~~v~~~v~r 433 (518)
..+.+.+.|
T Consensus 82 ~~v~l~v~r 90 (391)
T 3tsz_A 82 EEVTILAQK 90 (391)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEee
Confidence 555555544
No 335
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=8.1e-08 Score=82.17 Aligned_cols=82 Identities=21% Similarity=0.282 Sum_probs=61.8
Q ss_pred EEEEeCCC-CCceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh-cCcC
Q psy3479 350 EVVVPKAK-GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL-MKTM 427 (518)
Q Consensus 350 ~V~L~k~~-~~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~-~~~v 427 (518)
.+.+.+.. ..+|||++..........+++|..|.+++||+++|+|++||+|++|||+.+. ++.++..+|+.. +..+
T Consensus 22 ~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v 99 (124)
T 1wh1_A 22 EVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEENKNF 99 (124)
T ss_dssp CBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSCCSC
T ss_pred EEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCEE
Confidence 45555533 3589999986322112358999999999999999999999999999999998 588888888764 3455
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 100 ~l~v~R 105 (124)
T 1wh1_A 100 SLLIAR 105 (124)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 555554
No 336
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.59 E-value=3.2e-08 Score=79.77 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=54.3
Q ss_pred cEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEe
Q psy3479 91 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKI 159 (518)
Q Consensus 91 ~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~ 159 (518)
|++|..|.++|||++ | |++||.|++|||..+.. ..+...+|+..+.+..|+|+|.|.....++.+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 66 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEKEKRVTL 66 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSCEECCCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCEEEEEEE
Confidence 567889999999999 8 99999999999999985 57899999987545699999998765544433
No 337
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.57 E-value=1.1e-07 Score=80.53 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=58.4
Q ss_pred EEEeCCCCCceeEEEEeC-CCCCcCCcEEEEEecC--CChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHhcCcC
Q psy3479 351 VVVPKAKGEILGVVIVES-GWGSMLPTVVIANLAP--AGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKILMKTM 427 (518)
Q Consensus 351 V~L~k~~~~~lG~~i~~~-~~g~~~~g~~I~~V~~--~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~~~~v 427 (518)
+.+.+...+.+||.+.-. .......+++|..|.+ ++||+++| |+.||+|++|||..+.+++++++..+++..+..+
T Consensus 19 ~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v 97 (118)
T 2yub_A 19 ISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTL 97 (118)
T ss_dssp EEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCE
T ss_pred eccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEE
Confidence 334333344556655421 1111235899999999 99999999 9999999999999999888899999998764444
Q ss_pred CeeEEE
Q psy3479 428 PTSMFR 433 (518)
Q Consensus 428 ~~~v~r 433 (518)
.+.+.|
T Consensus 98 ~l~v~R 103 (118)
T 2yub_A 98 QLLIEH 103 (118)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444433
No 338
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.51 E-value=2e-07 Score=75.55 Aligned_cols=68 Identities=21% Similarity=0.313 Sum_probs=56.8
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
..+++|..|.++|||++ | |++||.|++|||..+.. ..+...+|+....+..|+|+|.|.....++.+.
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 71 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQHEAELV 71 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 34789999999999999 8 99999999999999975 578889998874446899999998765555554
No 339
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.51 E-value=4.9e-07 Score=74.13 Aligned_cols=67 Identities=21% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEe
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKI 159 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~ 159 (518)
..|++|..|.++|||++ | |++||.|++|||+.+.. ..+...+|+....+..|.|+|.|.....++.+
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 72 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDKNEQADI 72 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEEEEEEE
Confidence 45899999999999995 7 99999999999999975 47888888876445699999998765544443
No 340
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.46 E-value=8.9e-07 Score=90.90 Aligned_cols=84 Identities=23% Similarity=0.390 Sum_probs=69.1
Q ss_pred cceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCc
Q psy3479 74 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAP 153 (518)
Q Consensus 74 ~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~ 153 (518)
.++|+.+..... ...+++|..+.++|||+++| |++||+|++|||+++.+++..++..+|+... +..|+|+|.|...
T Consensus 85 ~giG~~~~~~~~--~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGG--SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEA-DSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTT--CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBST-TCEEEEEEEETTE
T ss_pred EEEEEEEEEeec--CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CCEEEEEEEeCCC
Confidence 359999875411 13478999999999999999 9999999999999999999999999998654 3689999998765
Q ss_pred ---eeEEEeeC
Q psy3479 154 ---VVEVKIKR 161 (518)
Q Consensus 154 ---~~~~~~~r 161 (518)
..++.+.|
T Consensus 161 ~~~~~~~~l~r 171 (388)
T 1fc6_A 161 PSNTRTLQLTR 171 (388)
T ss_dssp EEEEEEEEEEC
T ss_pred CcceEEEEEEE
Confidence 55566664
No 341
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.43 E-value=8.8e-07 Score=74.24 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=56.1
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
..+++|..|.++|||+++| |++||.|++|||+.+. +..+...+|+. + ..+.|+|.|......+.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~--~~v~l~v~R~g~~~~~~v~ 99 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-Q--SQLAVQIRRGRETLTLYVT 99 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-C--SSEEEEEEETTEEEEEEEC
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C--CeEEEEEEECCEEEEEEEE
Confidence 4689999999999999999 9999999999999998 57888899987 3 3799999987655555554
No 342
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.43 E-value=8.8e-07 Score=70.57 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=56.4
Q ss_pred eeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCcee
Q psy3479 76 LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVV 155 (518)
Q Consensus 76 lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~ 155 (518)
||+.....+ | ...|+.|..+.|++||+++| |++||.|++|||+.+..+ .+..++++..+.+..++|+|.|.....
T Consensus 7 ~~~~p~~~~-g-~~~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g~~~ 81 (87)
T 2i6v_A 7 VRLSQVKRD-D-KVLGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDGQQH 81 (87)
T ss_dssp EEEEEEEET-T-EEEEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETTEEE
T ss_pred cceEEEeeC-C-eEEEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 666655322 1 13477888999999999999 999999999999999754 666777776544468999998865433
No 343
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.38 E-value=1.2e-06 Score=75.77 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=56.1
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
..+++|..|.++|||+ +| |++||.|++|||+.+.+. .+...+|+..+.+..|+|+|.|.....++.+.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 123 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKEETTSIK 123 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 3579999999999999 88 999999999999999864 67888888764346999999987765555554
No 344
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.35 E-value=1e-06 Score=71.48 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=49.5
Q ss_pred EEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCC
Q psy3479 92 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 92 ~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~ 152 (518)
-+|..|.++|||+++| |+.||+|++|||+.+.. ..++...|.....+..|.|+|.|..
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEEEEEECC
Confidence 3789999999999999 99999999999999985 4788888876654358999998875
No 345
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.29 E-value=1.5e-06 Score=69.77 Aligned_cols=65 Identities=23% Similarity=0.386 Sum_probs=53.3
Q ss_pred EEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 92 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 92 ~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
++|..+.++|||+++| |+.||+|++|||+.+.. ..+...+|+... +..+.|+|.|......+.+.
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~-g~~v~l~v~R~g~~~~~~v~ 70 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNP-GXSLALEIERQGSPLSLTLI 70 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCT-TCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCC-CCeEEEEEEECCeEEEEEEE
Confidence 5688999999999999 99999999999999985 578888888753 35899999887655444443
No 346
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.28 E-value=2.7e-06 Score=71.10 Aligned_cols=66 Identities=26% Similarity=0.321 Sum_probs=54.0
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
..+++|..|.+++||+++| |++||.|++|||+.+.. ..+...+|+. + ..+.|+|.|......+.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-g--~~v~l~v~R~g~~~~~~v~ 99 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVLT-E--SPLLLEVRRGNDDLLFSIA 99 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-C--SSEEEEEEETTEEEEEEEC
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHhC-C--CeEEEEEEECCEEEEEEEE
Confidence 3589999999999999999 99999999999999974 5788888864 3 3789999887655445443
No 347
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.22 E-value=1.5e-06 Score=70.51 Aligned_cols=44 Identities=18% Similarity=0.284 Sum_probs=39.1
Q ss_pred EEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 468 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 468 i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+|.+|.++|||+++| |++||+|++|||+++.+ ++++...|+..
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~ 47 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDK 47 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHh
Confidence 4799999999999999 99999999999999964 58888888653
No 348
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.19 E-value=3.9e-06 Score=69.33 Aligned_cols=63 Identities=21% Similarity=0.158 Sum_probs=48.7
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCcee
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVV 155 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~ 155 (518)
.|+.|....|++||+++| |++||.|++|||+.+..+. +...+++....+..++|+|.|.....
T Consensus 37 ~G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~~~ 99 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQQH 99 (105)
T ss_dssp EEEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETTEEE
T ss_pred EEEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECCEEE
Confidence 366778888888889999 9999999999999998764 44466665333358999998865443
No 349
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.17 E-value=8e-06 Score=81.64 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=60.7
Q ss_pred ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEe-CCc
Q psy3479 75 ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVP-CAP 153 (518)
Q Consensus 75 ~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~-~~~ 153 (518)
.||+.+.... ...+++|..|.+++||+++| |+.||.|++|||+.+... .+...+|+....+..|+|+|.| ...
T Consensus 230 ~lGi~~~~~~---~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 230 SLGVQVTNDK---DTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp ECCEEEESCS---SSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred ccceEeeecc---CCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 4777665321 14578999999999999999 999999999999999864 6778888765434689999998 654
Q ss_pred eeEEEe
Q psy3479 154 VVEVKI 159 (518)
Q Consensus 154 ~~~~~~ 159 (518)
..++.+
T Consensus 304 ~~~~~v 309 (324)
T 1y8t_A 304 SRTVQV 309 (324)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 350
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.17 E-value=9.1e-06 Score=81.02 Aligned_cols=84 Identities=19% Similarity=0.342 Sum_probs=64.8
Q ss_pred cceeEEEEecC------Cc-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEE
Q psy3479 74 EILGVVIVESG------WG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKL 146 (518)
Q Consensus 74 ~~lG~~l~~~~------~~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l 146 (518)
..||+.+..-. .+ ....+++|..|.+++||+++| |++||.|++|||+.+.. ..+...+|+....+..|+|
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEE
T ss_pred ccceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEE
Confidence 34777776421 11 113589999999999999999 99999999999999986 4788889987544569999
Q ss_pred EEEeCCceeEEEee
Q psy3479 147 TVVPCAPVVEVKIK 160 (518)
Q Consensus 147 ~v~~~~~~~~~~~~ 160 (518)
+|.|.....++.+.
T Consensus 298 ~v~R~g~~~~~~v~ 311 (318)
T 1te0_A 298 VVMRDDKQLTLQVT 311 (318)
T ss_dssp EEESSSCEEEEEEE
T ss_pred EEEECCEEEEEEEE
Confidence 99998765555543
No 351
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.17 E-value=2.6e-06 Score=71.33 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=41.4
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.+++|.+|.++|||+++| |++||+|++|||+++. +++++..+|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~ 79 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT 79 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC
Confidence 578999999999999999 9999999999999996 46889888876
No 352
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.15 E-value=5.2e-06 Score=89.57 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=62.5
Q ss_pred ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCce
Q psy3479 75 ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPV 154 (518)
Q Consensus 75 ~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~ 154 (518)
.||+.+...+ .+++|..|.++|||+++| |++||.|++|||..+.. .+..++|+..+.+..|+|+|.|....
T Consensus 486 ~lG~~~~~~~-----~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 486 NFGAKYKASP-----QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCSEEEEEET-----TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred ccceEEeccC-----CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 5999987543 278999999999999999 99999999999999953 45566777654457999999998776
Q ss_pred eEEEee
Q psy3479 155 VEVKIK 160 (518)
Q Consensus 155 ~~~~~~ 160 (518)
.++.+.
T Consensus 557 ~~~~v~ 562 (597)
T 4fgm_A 557 MTLELT 562 (597)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666554
No 353
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.15 E-value=1.2e-05 Score=68.68 Aligned_cols=66 Identities=23% Similarity=0.304 Sum_probs=53.0
Q ss_pred CCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 89 LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 89 ~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
..+++|..|.+++||+++ |++||+|++|||+.+..+ .+...+|+....+..|+|+| |... ..+.+.
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~-~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT-FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE-EEEECC
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE-EEEEEe
Confidence 357899999999999997 999999999999999854 67888888644446899999 7654 444443
No 354
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.15 E-value=6.3e-07 Score=72.11 Aligned_cols=44 Identities=18% Similarity=0.327 Sum_probs=39.4
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 467 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 467 ~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
|++|.+|.++|||++ | |++||+|++|||+++.+ ++++..+|+..
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~ 45 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSK 45 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcC
Confidence 567899999999999 9 99999999999999965 58999998864
No 355
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.14 E-value=2.8e-06 Score=87.14 Aligned_cols=74 Identities=14% Similarity=0.140 Sum_probs=57.6
Q ss_pred CcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCC
Q psy3479 73 GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCA 152 (518)
Q Consensus 73 ~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~ 152 (518)
..+|||++.....+...-.++|..|.|+|||+++| |+.||+|++|||+.+.++. +..+|+. . +..|+|+|.|..
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~-g~~v~l~v~R~g 146 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-S-TRQLQIGVYKEV 146 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-S-CEEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-C-CCEEEEEEEeCC
Confidence 44588888754321111137899999999999999 9999999999999999985 5677887 3 479999998753
No 356
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.14 E-value=3.2e-06 Score=69.15 Aligned_cols=44 Identities=23% Similarity=0.290 Sum_probs=39.4
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.|++|.+|.++|||++ | |++||+|++|||+++.+ ++++..+|+.
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~ 50 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHS 50 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHT
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 4799999999999996 8 99999999999999965 5888888875
No 357
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.12 E-value=2.4e-06 Score=68.04 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=38.0
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 467 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 467 ~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
|+.|..+.|+|+|+++| |++||+|++|||+++.+ ++++.++++.
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~ 63 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQS 63 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHh
Confidence 56788889999999999 99999999999999965 5777777764
No 358
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.10 E-value=8.6e-06 Score=82.07 Aligned_cols=68 Identities=24% Similarity=0.418 Sum_probs=58.2
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
.|++|..|.++|||+++| |++||.|++|||+.+. +..+...+|+....+..|+|+|.|.....++.+.
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 330 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVT 330 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 589999999999999999 9999999999999998 5678888998865557999999998765555443
No 359
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.08 E-value=2.6e-06 Score=68.27 Aligned_cols=44 Identities=34% Similarity=0.547 Sum_probs=39.5
Q ss_pred EEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 468 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 468 i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
++|.+|.++|||+++| |++||+|++|||+++.+ ++++..+|+..
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~ 49 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDN 49 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHC
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcC
Confidence 5789999999999999 99999999999999964 68998888763
No 360
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.07 E-value=2.2e-06 Score=69.34 Aligned_cols=45 Identities=24% Similarity=0.399 Sum_probs=40.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+++|.+|.++|||++ | |++||+|++|||+++.+ ++++..+|+..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~ 49 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREK 49 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHS
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhC
Confidence 4689999999999999 9 99999999999999965 58888888764
No 361
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.07 E-value=1.9e-05 Score=83.61 Aligned_cols=167 Identities=13% Similarity=0.149 Sum_probs=102.5
Q ss_pred cceeEEEEecCC-------c-CCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCH--------HHHHHHHhc
Q psy3479 74 EILGVVIVESGW-------G-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPL--------STCQTYIKN 137 (518)
Q Consensus 74 ~~lG~~l~~~~~-------~-~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~--------~~~~~~l~~ 137 (518)
..||+.+..-.. + ....|++|..|.|+|||++ + |+.||.|++|||+.+..... .....++..
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 348888865211 1 0134899999999999986 5 99999999999999965321 123445666
Q ss_pred CCCCcEEEEEEEeCCceeEEEee---CCCC------------ccccceEecCCCCC--CCCCCCCCccc--------ccc
Q psy3479 138 SKNQTVVKLTVVPCAPVVEVKIK---RPDT------------KYQLGFSVQNGVAP--EGETQPSTEVD--------LFI 192 (518)
Q Consensus 138 ~~~~~~v~l~v~~~~~~~~~~~~---rp~~------------~~~~g~~v~~~~~~--~~~~~P~~~~~--------~~~ 192 (518)
..-+..|+|+|.|.....++.+. ||.. ....|+.++.-... ........... +..
T Consensus 331 ~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (539)
T 4fln_A 331 KFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVAR 410 (539)
T ss_dssp SCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCS
T ss_pred CCCCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhc
Confidence 55567999999998766554433 2211 01124333210000 00000000000 000
Q ss_pred cccceeEeeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcc
Q psy3479 193 STEKIMVLNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYI 248 (518)
Q Consensus 193 s~~~~gi~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~ 248 (518)
.....++.++.|. |++++... .++.||.|++|||+.+.++. +..++++.+
T Consensus 411 ~~~~~gVvvs~V~-~~s~a~~~---g~~~gdiI~~vNg~~V~s~~--~l~~~l~~~ 460 (539)
T 4fln_A 411 FRGEQIVILSQVL-ANEVNIGY---EDMNNQQVLKFNGIPIRNIH--HLAHLIDMC 460 (539)
T ss_dssp STTCCCEEEEEEC-CCGGGTTC---SSCCSEEEEEETTEECCSHH--HHHHHHHTC
T ss_pred cCCceEEEEEEec-CCchhhhc---CCCCCCEEEeECCEEcCCHH--HHHHHHHHc
Confidence 1112578999998 88887765 68899999999999998765 455666655
No 362
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.06 E-value=5.6e-06 Score=69.15 Aligned_cols=45 Identities=31% Similarity=0.467 Sum_probs=40.4
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.+++|..|.++|||+++| |++||+|++|||+++.+ +.++..+|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~ 79 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVLT 79 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHhC
Confidence 479999999999999999 99999999999999964 5888888754
No 363
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.04 E-value=5e-06 Score=71.90 Aligned_cols=45 Identities=16% Similarity=0.139 Sum_probs=39.9
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+++|.+|.++|||+ +| |++||+|++|||+++.+ ++++..+|+..
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~ 101 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNH 101 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHS
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhC
Confidence 478999999999999 99 99999999999999965 47888888764
No 364
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.94 E-value=1.5e-05 Score=81.76 Aligned_cols=61 Identities=28% Similarity=0.465 Sum_probs=51.4
Q ss_pred ccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 450 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 450 ~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.++|+.+.... ....+++|.+|.++|||+++| |++||+|++|||+++.+++.+++.++|+.
T Consensus 85 ~giG~~~~~~~--~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~ 145 (388)
T 1fc6_A 85 TGVGLEITYDG--GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQG 145 (388)
T ss_dssp BBCSEEEEECT--TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCB
T ss_pred EEEEEEEEEee--cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 57888886320 112468999999999999999 99999999999999999999999999874
No 365
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.92 E-value=8.2e-06 Score=67.33 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=36.5
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 467 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 467 ~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
++.|..+.|+|+|+++| |++||+|++|||+++.++ .++.++++.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~ 81 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQS 81 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHH
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHh
Confidence 45678888888999999 999999999999999876 556666653
No 366
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=97.91 E-value=2.5e-06 Score=76.23 Aligned_cols=52 Identities=63% Similarity=0.948 Sum_probs=43.9
Q ss_pred cccchhhhhhhhccccccceeeecCcEEEEEEeecCCCCCCCCCCCCCCCCcccccccccee
Q psy3479 4 FNDRVHKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESDE 65 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~~ 65 (518)
+-|.-|+|.+|+|+|+.|||++|.++++.+|||.+..+ ...++.||||++++
T Consensus 66 v~d~~t~~~i~~~~l~~ISf~a~~~~~f~fIar~~~~~----------~~~~~~CHVF~~~~ 117 (162)
T 4dbb_A 66 VLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMPR----------SQYKMICHVFESED 117 (162)
T ss_dssp EEETTTCCEEEEEEGGGEEEEEEETTEEEEEEEECCST----------TCEEEEEEEEECTT
T ss_pred EEECCCCcEEeeeecceeEEEEECCCEEEEEeccCCCC----------CCCcEEEEEEECCC
Confidence 34566899999999999999999999999999996532 25689999999764
No 367
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.85 E-value=3.3e-05 Score=77.92 Aligned_cols=68 Identities=24% Similarity=0.364 Sum_probs=57.6
Q ss_pred CcEEEEEecCCChhhhcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEE
Q psy3479 90 PTVVIANLAPAGAAARCGQLNI-----------GDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVK 158 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~-----------GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~ 158 (518)
.|++|..|.++|||+++| |+. ||.|++|||+.+.++ ++...+|.....+..|+|+|.|.....++.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 327 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKEKIS 327 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEEEEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEEEEE
Confidence 589999999999999999 999 999999999999866 688888876654569999999987655554
Q ss_pred ee
Q psy3479 159 IK 160 (518)
Q Consensus 159 ~~ 160 (518)
+.
T Consensus 328 v~ 329 (348)
T 3qo6_A 328 VT 329 (348)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 368
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.83 E-value=4.4e-05 Score=76.25 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=55.6
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEee
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKIK 160 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~~ 160 (518)
.|++|..|.++|||+++| |++||.|++|||+.+.. .++..++|+.. ..|.|+|.|.....++.+.
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~~---~~v~l~v~R~g~~~~~~v~ 320 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRTQ---SQLAVQIRRGRETLTLYVT 320 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTTC---SSEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhCC---CeEEEEEEECCEEEEEEEE
Confidence 589999999999999999 99999999999999975 57888889873 3799999998766555553
No 369
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.70 E-value=6.2e-05 Score=64.11 Aligned_cols=44 Identities=27% Similarity=0.400 Sum_probs=39.3
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.+++|..|.++|||+++ |++||+|++|||+++.+ ++++..+|+.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~ 68 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKT 68 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTT
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHh
Confidence 47899999999999998 99999999999999965 5888888874
No 370
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.66 E-value=3.6e-05 Score=78.90 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=44.2
Q ss_pred CccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 449 GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 449 ~~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
..++||.+.....+...-.++|..|.|+|||+++| |++||+|++|||+++.+++ +.++|+.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~ 133 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG 133 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC
Confidence 45667776532111111136899999999999999 9999999999999998875 4455543
No 371
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=97.64 E-value=1.3e-05 Score=71.47 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=41.0
Q ss_pred ccccchhhhhhhhccccccceeeecCc---EEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 3 TFNDRVHKEIMMDHALRTISYIADIGD---LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
++-|.-|++.||+|||+.|||+|+..+ ++.+|||+..+.. ....++.||||+++
T Consensus 69 ~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~--------~~~~~~~CHVF~~~ 125 (160)
T 2ej8_A 69 KLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRS--------ESNLSSVCYIFESN 125 (160)
T ss_dssp EEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC--------------CEEEEEEEEES
T ss_pred EEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCccc--------CCCccEEEEEEEcc
Confidence 445677999999999999999998865 9999999963211 11347999999865
No 372
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.61 E-value=7.8e-05 Score=75.01 Aligned_cols=72 Identities=19% Similarity=0.345 Sum_probs=54.6
Q ss_pred CceeEEEEeC------CCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCcCCe
Q psy3479 359 EILGVVIVES------GWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKTMPT 429 (518)
Q Consensus 359 ~~lG~~i~~~------~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~v~~ 429 (518)
.+||+.+..- .++.+ ..|++|..|.++|||+++| |++||+|++|||+.+. ++.+....+.. .+..+.+
T Consensus 240 ~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l 316 (345)
T 3stj_A 240 GLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKL 316 (345)
T ss_dssp EECCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEE
T ss_pred cccceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEE
Confidence 4788887641 12222 2489999999999999999 9999999999999998 67777777765 3455555
Q ss_pred eEEE
Q psy3479 430 SMFR 433 (518)
Q Consensus 430 ~v~r 433 (518)
.+.|
T Consensus 317 ~v~R 320 (345)
T 3stj_A 317 GLLR 320 (345)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 373
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.57 E-value=7.9e-05 Score=74.41 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=41.7
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhhc
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVN 514 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~~ 514 (518)
.+++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|+..
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~~ 301 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRTQ 301 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTTC
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhCC
Confidence 479999999999999999 99999999999999965 58898888763
No 374
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.56 E-value=0.00013 Score=72.78 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=51.4
Q ss_pred CceeEEEEeCCCCCcCCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHHh--cCcCCeeE
Q psy3479 359 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKIL--MKTMPTSM 431 (518)
Q Consensus 359 ~~lG~~i~~~~~g~~~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~~--~~~v~~~v 431 (518)
.+||+.+... ....+++|..|.++|||+++| |+.||+|++|||+.+. ++.+....+... +..+.+.+
T Consensus 229 ~~lGi~~~~~---~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v 297 (324)
T 1y8t_A 229 ASLGVQVTND---KDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTF 297 (324)
T ss_dssp EECCEEEESC---SSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEE
T ss_pred cccceEeeec---cCCCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEE
Confidence 4789988641 123479999999999999999 9999999999999998 566777777642 34444444
No 375
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=97.56 E-value=1.9e-05 Score=71.25 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=40.8
Q ss_pred ccccchhhhhhhhccccccceeeecCc---EEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 3 TFNDRVHKEIMMDHALRTISYIADIGD---LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
++-|.-|++.||+|||+.|||+|+..+ ++.+|||+..+.. ....++.||||+++
T Consensus 82 ~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~--------~~~~~~~CHVF~~~ 138 (175)
T 2ela_A 82 KLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRS--------ESNLSSVCYIFESN 138 (175)
T ss_dssp EEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC---------------CEEEEEEEEES
T ss_pred EEEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecCcccc--------CCCcceEEEEEEcc
Confidence 345677999999999999999998865 9999999963211 11347999999865
No 376
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.52 E-value=0.00017 Score=71.77 Aligned_cols=70 Identities=23% Similarity=0.355 Sum_probs=51.0
Q ss_pred CceeEEEEeC------CCCCc-CCcEEEEEecCCChhhhcCCCCCCCEEEEEcCeeccCCChHHHHHHHHH--hcCcCCe
Q psy3479 359 EILGVVIVES------GWGSM-LPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKI--LMKTMPT 429 (518)
Q Consensus 359 ~~lG~~i~~~------~~g~~-~~g~~I~~V~~~s~A~~~G~l~~GD~Il~Vng~~v~~~s~~~~~~~l~~--~~~~v~~ 429 (518)
.+||+.+..- .++.. ..+++|..|.++|||+++| |++||+|++|||+.+. ++.+...++.. .+..+.+
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEE
T ss_pred ccceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEE
Confidence 3577776541 11221 2489999999999999999 9999999999999998 56777777764 2344444
Q ss_pred eE
Q psy3479 430 SM 431 (518)
Q Consensus 430 ~v 431 (518)
.+
T Consensus 298 ~v 299 (318)
T 1te0_A 298 VV 299 (318)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 377
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.45 E-value=9.2e-05 Score=79.83 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=43.4
Q ss_pred ccccEEEEecCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 450 EILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 450 ~~lG~~i~~~g~~~~~~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
..||+.+... ..+++|.+|.++|||+++| |++||+|++|||.++.. .++.++|+.
T Consensus 485 ~~lG~~~~~~-----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~ 539 (597)
T 4fgm_A 485 VNFGAKYKAS-----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILER 539 (597)
T ss_dssp CCCSEEEEEE-----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTT
T ss_pred cccceEEecc-----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHh
Confidence 4688887532 2368999999999999999 99999999999999953 445555543
No 378
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.40 E-value=0.00055 Score=79.01 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=62.8
Q ss_pred cceeEEEEecCCcCCCCcEEEEEecCC--------ChhhhcC-CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEE
Q psy3479 74 EILGVVIVESGWGSMLPTVVIANLAPA--------GAAARCG-QLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVV 144 (518)
Q Consensus 74 ~~lG~~l~~~~~~~~~~~~~V~~v~~g--------g~A~~~G-~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v 144 (518)
+++|+.+...+ .+++|..+.+| |||+++| .|+ ||+|++|||+.+.++. +++.+|+... +..|
T Consensus 737 ~g~G~~~~~~~-----~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~-g~~v 807 (1045)
T 1k32_A 737 GRIACDFKLDG-----DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKA-GTSA 807 (1045)
T ss_dssp CBCSEEEEEET-----TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTT-TSEE
T ss_pred ceecEEEEEeC-----CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCC-CCEE
Confidence 46999987533 37899999998 9999999 499 9999999999999987 7888999855 4799
Q ss_pred EEEEEeCC-ceeEEEee
Q psy3479 145 KLTVVPCA-PVVEVKIK 160 (518)
Q Consensus 145 ~l~v~~~~-~~~~~~~~ 160 (518)
+|+|.|.. ...++.+.
T Consensus 808 ~l~v~r~~~~~~~~~~~ 824 (1045)
T 1k32_A 808 RIRLSGKGGDKRDLMID 824 (1045)
T ss_dssp EEEEECSSSCEEEEEEE
T ss_pred EEEEECCCCceEEEEEE
Confidence 99998865 23344454
No 379
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00016 Score=72.83 Aligned_cols=45 Identities=29% Similarity=0.471 Sum_probs=41.1
Q ss_pred CcEEEEEECCCChhhhcCCCCC-----------CCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNI-----------GDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.|++|.+|.++|||+++| |++ ||+|++|||+++.++ +++..+|..
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~ 306 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQ 306 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTT
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHh
Confidence 489999999999999999 999 999999999999765 888888864
No 380
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.29 E-value=3.6e-05 Score=77.15 Aligned_cols=64 Identities=23% Similarity=0.353 Sum_probs=0.0
Q ss_pred CcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCcEEEEEEEeCCceeEEEe
Q psy3479 90 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKNSKNQTVVKLTVVPCAPVVEVKI 159 (518)
Q Consensus 90 ~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~~~l~~~~~~~~v~l~v~~~~~~~~~~~ 159 (518)
.|++|..|.++|||+++| |++||.|++|||+.+. +..+...+|+. + ..|+|+|.|.....++.+
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~--~~v~l~v~R~g~~~~~~v 317 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-E--STLNMVVRRGNEDIMITV 317 (332)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C--CeEEEEEEECCEEEEEEE
Confidence 478999999999999999 9999999999999996 45677778876 3 479999988755444433
No 381
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.14 E-value=6.4e-05 Score=75.28 Aligned_cols=45 Identities=31% Similarity=0.408 Sum_probs=0.0
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 466 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 466 ~~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.+++|.+|.++|||+++| |++||+|++|||+++.+ ++++.++|+.
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~ 298 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVS--ANDVSDVIKR 298 (332)
T ss_dssp ------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC
Confidence 478999999999999999 99999999999999964 4777777765
No 382
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=95.99 E-value=0.00093 Score=59.41 Aligned_cols=124 Identities=64% Similarity=1.002 Sum_probs=80.3
Q ss_pred eeecccCCCCCCCCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcccccccEEEEEeecccCCCCCCCCCCCCCCCc
Q psy3479 200 LNTDLKAPEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQEADEPPKISRTPK 279 (518)
Q Consensus 200 ~v~~i~~p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~lvv~~~~~~~~~~~~~~~~~~~~~~~ 279 (518)
.+.++. +.|...+..+..|.+..+-+.+-..+.....+++.+..+..+.+..+..-...+.+.. .....
T Consensus 39 Ai~ri~-~~~~~~~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~~~~f~fIar~~~~----------~~~~~ 107 (162)
T 4dbb_A 39 AVSRIK-PEGESQPMTEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMP----------RSQYK 107 (162)
T ss_dssp HHHTCC------CCCEEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEEEETTEEEEEEEECCS----------TTCEE
T ss_pred HHHHHH-HhcCCCCCcEEEEEEECCEEEEEECCCCcEEeeeecceeEEEEECCCEEEEEeccCCC----------CCCCc
Confidence 445555 4444444444567777777777555555556666666666666555555444443210 12457
Q ss_pred cccccccCchhhhHhhhccchhhhhhHHHHhhCCCCCCCCccccchhhhccccccc
Q psy3479 280 MICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIEDHSFVKEMDYQEVLNSQEIF 335 (518)
Q Consensus 280 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (518)
..||+|....++.+..++|++|.++|++|++.+++.+.. .+..+|++++++|++|
T Consensus 108 ~~CHVF~~~~A~~I~~tigqAF~~ay~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 162 (162)
T 4dbb_A 108 MICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPED-LSQKEYSDLLNTQDMY 162 (162)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHGGGTTC--CCGGG-SCHHHHHHHHHHC---
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHcCCChHH-cccchhhhhccccccC
Confidence 899999988888899999999999999999999998654 4778999998887764
No 383
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=95.86 E-value=0.0017 Score=60.05 Aligned_cols=45 Identities=24% Similarity=0.526 Sum_probs=36.2
Q ss_pred cccchhhhhhhhccccccceee----ecCcEEEEEEeecCCCCCCCCCCCCCCCCcccccccc
Q psy3479 4 FNDRVHKEIMMDHALRTISYIA----DIGDLVVLMARRRFVSQEADEPPKISRTPKMICHVFE 62 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~ 62 (518)
+-|.-|++.||+|+|+.|||++ |..+.+-+++|... .++.||||+
T Consensus 133 v~d~~t~~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~--------------~~~~CHVF~ 181 (207)
T 1n3h_A 133 LMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPV--------------NQRACHILE 181 (207)
T ss_dssp EEETTTTSCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSS--------------SCCEEEEEE
T ss_pred EEeCCCCceeeeeccceEEEEeccCCCcCCEEEEEecCCC--------------CCEEEEEEE
Confidence 3355689999999999999999 44678889988641 367999997
No 384
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.79 E-value=0.0088 Score=68.87 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=45.8
Q ss_pred ccccEEEEecCCCCCCCcEEEEEECCC--------ChhhhcCC-CCCCCEEEEECCEeCCCCCHHHHHHHhhh
Q psy3479 450 EILGVVIVESGWGSMLPTVVIANLAPA--------GAAARCGQ-LNIGDQIIAVNGVSLVGLPLSTCQTYIKV 513 (518)
Q Consensus 450 ~~lG~~i~~~g~~~~~~~i~I~~V~~g--------s~A~~aG~-L~~GD~Il~VNg~~v~~~s~~e~v~~lk~ 513 (518)
.++|+.+... ..+++|.+|.++ |||+++|. |+ ||+|++|||+++.++. +++.+|+.
T Consensus 737 ~g~G~~~~~~-----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~ 801 (1045)
T 1k32_A 737 GRIACDFKLD-----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSE 801 (1045)
T ss_dssp CBCSEEEEEE-----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHT
T ss_pred ceecEEEEEe-----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcC
Confidence 4778877521 246899999998 99999994 89 9999999999998874 77888765
No 385
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=95.72 E-value=0.0033 Score=56.20 Aligned_cols=49 Identities=22% Similarity=0.420 Sum_probs=38.0
Q ss_pred ccccchhhhhhhhccccccceeeecCc---EEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 3 TFNDRVHKEIMMDHALRTISYIADIGD---LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
+.-|.-|++.+|+|||++|||+++..+ ++-+++|.. ...++.||||..+
T Consensus 90 ~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~-------------~~~~~~CHvF~c~ 141 (168)
T 3f0w_A 90 RVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDG-------------TTRRWICHCFLAL 141 (168)
T ss_dssp EEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEET-------------TTTEEEEEEEEES
T ss_pred EEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecC-------------CCCcEEEEEEEec
Confidence 344666899999999999999997643 888888852 1247999999853
No 386
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=95.24 E-value=0.0047 Score=54.72 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=34.7
Q ss_pred ccccchhhhhhhhccccccceeeec-Cc--EEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 3 TFNDRVHKEIMMDHALRTISYIADI-GD--LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
++-|.-|++.||+|||+.|||+++. .| ++-+++|.. ..+.||+|+++
T Consensus 72 ~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~---------------~~h~c~vf~s~ 121 (160)
T 1p3r_A 72 KIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGE---------------GQHQFFAIKTG 121 (160)
T ss_dssp EEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESST---------------TCEEEEEEEES
T ss_pred EEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecC---------------CEEEEEEEccH
Confidence 3446678999999999999999965 44 677777631 25677777653
No 387
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=95.24 E-value=0.0036 Score=56.12 Aligned_cols=109 Identities=69% Similarity=1.006 Sum_probs=69.2
Q ss_pred CCCCCCCCCccceeeeceEEEEcccchhhhhHHHHHHHhhcccccccEEEEEeecccCCCC---CCC----CCCCCCCCc
Q psy3479 207 PEGETQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVSQE---ADE----PPKISRTPK 279 (518)
Q Consensus 207 p~g~a~~~~~g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~lvv~~~~~~~~~~~---~~~----~~~~~~~~~ 279 (518)
|.+...+..+..|.+..+-+.+-+.+.+.+.+++.+..+.++.+..++.....+++....+ +.+ .....++..
T Consensus 56 ~~g~~~~~~~V~L~IS~~gikv~d~~t~~il~~~~l~~ISf~aD~~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~ 135 (172)
T 1aqc_A 56 PEGESQPMTEVDLFILTQRIKVLNADTQETMMDHPLRTISYIADIGNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYK 135 (172)
T ss_dssp --------CEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEEETTEEEEEECCC----------------------CE
T ss_pred cccccCCCcEEEEEEECCeEEEEeCCCCceEeccccceEEEEeeCCcEEEEEecCCCccccccccccccccccccCCCCc
Confidence 3343333444678888888888777777778888888898988888888888776532111 000 001123467
Q ss_pred cccccccCchhhhHhhhccchhhhhhHHHHhhCCCC
Q psy3479 280 MICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIE 315 (518)
Q Consensus 280 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 315 (518)
..||+|.+.+++.+..++|++|.++|++|++.|++.
T Consensus 136 ~~CHVF~s~~A~~I~~tIGqAF~~ay~~~l~~~g~~ 171 (172)
T 1aqc_A 136 MICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGIN 171 (172)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred EEEEEEECccHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 899999998899999999999999999999888764
No 388
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=94.86 E-value=0.0099 Score=51.02 Aligned_cols=48 Identities=17% Similarity=0.403 Sum_probs=37.2
Q ss_pred cccchhhhhhhhccccccceeeecC---cEEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 4 FNDRVHKEIMMDHALRTISYIADIG---DLVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
.-|.-|++.+|+||++.|||++.-+ +++-+++|.. ....+.||||..+
T Consensus 57 l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~-------------~~~~~~CHvF~c~ 107 (137)
T 3so6_A 57 LTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQ-------------QNESLECHAFLCT 107 (137)
T ss_dssp EEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECS-------------SSSCEEEEEEECS
T ss_pred EEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcC-------------CCCeEEEEEEEeC
Confidence 3456688999999999999999643 5888888863 1257899999854
No 389
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=92.63 E-value=0.032 Score=48.79 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=27.1
Q ss_pred cccchhhhhhhhccccccceeee-cCc--EEEEEEee
Q psy3479 4 FNDRVHKEIMMDHALRTISYIAD-IGD--LVVLMARR 37 (518)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~rr 37 (518)
+-|.-|++.||+|+|+.|||+|+ ..| ++-+++|.
T Consensus 74 v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~ 110 (152)
T 1ntv_A 74 IFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGK 110 (152)
T ss_dssp EEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESS
T ss_pred EEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEc
Confidence 44667899999999999999996 455 67777763
No 390
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=51.28 E-value=6.3 Score=33.70 Aligned_cols=49 Identities=22% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccccchhhhhhhhccccccceee---ecCc--EEEEEEeecCCCCCCCCCCCCCCCCccccccccc
Q psy3479 2 LTFNDRVHKEIMMDHALRTISYIA---DIGD--LVVLMARRRFVSQEADEPPKISRTPKMICHVFES 63 (518)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s 63 (518)
|++-|..||+.|.+.||..|++.+ |-|. .+-+++|. +.+.+..||||.-
T Consensus 66 lrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd-------------~~t~~~~CHvFrC 119 (148)
T 3d8d_A 66 LKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARD-------------KLTQMLKCHVFRC 119 (148)
T ss_dssp EEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEEC-------------TTTCCEEEEEEEE
T ss_pred EEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEec-------------CCCcceEeEEEEc
Confidence 345588899999999999999765 2222 35555554 2446889999974
No 391
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=42.37 E-value=60 Score=27.22 Aligned_cols=47 Identities=21% Similarity=0.367 Sum_probs=31.6
Q ss_pred ceeEEEE-ccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEE
Q psy3479 63 SDEVVVP-KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAV 118 (518)
Q Consensus 63 s~~v~l~-k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~V 118 (518)
-|.|.+. ...|+.|-=-+..+..||+. |--+|+|+| ..++||+|+=+
T Consensus 58 ~EkV~IvNvnNG~RfeTYvI~GerGSG~-------I~lNGAAAr--l~~~GD~VII~ 105 (143)
T 1pqh_A 58 NEAIDIWNVTNGKRFSTYAIAAERGSRI-------ISVNGAAAH--CASVGDIVIIA 105 (143)
T ss_dssp TCEEEEEETTTCCEEEEEEEEECTTCCC-------EECCGGGGG--TCCTTCEEEEE
T ss_pred CCEEEEEECCCCceEEEEEEEccCCCce-------EEechHHHc--cCCCCCEEEEE
Confidence 3457664 45667777667766665432 445688888 57999999854
No 392
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=40.22 E-value=42 Score=26.25 Aligned_cols=48 Identities=29% Similarity=0.343 Sum_probs=30.5
Q ss_pred ceeEEEE-ccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEEC
Q psy3479 63 SDEVVVP-KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 119 (518)
Q Consensus 63 s~~v~l~-k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VN 119 (518)
-|.|.+. ...|+.|-=-+..+..|| |++ --+|+|+| ..++||+|+=+.
T Consensus 17 ~E~V~IvNvnNG~Rf~TYvI~GerGS---G~I----~lNGAAAr--l~~~GD~vII~a 65 (96)
T 1vc3_B 17 FEQVDIYDITNGARLTTYALPGERGS---GVI----GINGAAAH--LVKPGDLVILVA 65 (96)
T ss_dssp TCEEEEEETTTCCEEEEECEEECTTT---TCE----EEEGGGGG--TCCTTCEEEEEE
T ss_pred CCEEEEEECCCCceEEEEEEEccCCC---CeE----EEchHHHc--cCCCCCEEEEEE
Confidence 3456664 455667776666666543 222 23488888 579999998543
No 393
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=38.30 E-value=55 Score=26.35 Aligned_cols=46 Identities=33% Similarity=0.470 Sum_probs=29.8
Q ss_pred eeEEEE-ccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEE
Q psy3479 64 DEVVVP-KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAV 118 (518)
Q Consensus 64 ~~v~l~-k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~V 118 (518)
|.|.+. ...|+.|-=-+..+..|| |++ --+|+|+| ..++||+|+=+
T Consensus 45 E~V~I~NvnNG~Rf~TYvI~GerGS---g~I----~lNGAAAr--~~~~GD~vII~ 91 (114)
T 3oug_A 45 EKVQVVNLNNGERLETYVIKGEPNS---KTI----ALNGPAAR--RCEIGDQLFII 91 (114)
T ss_dssp BEEEEEETTTCCEEEEEEEEECTTS---CCE----EEEGGGGG--GCCTTCEEEEE
T ss_pred CEEEEEECCCCceEEEEEEEccCCC---CEE----EeCCHHHh--ccCCCCEEEEE
Confidence 456664 456667776676666654 222 22488888 57999999854
No 394
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=37.23 E-value=4.2 Score=34.45 Aligned_cols=45 Identities=18% Similarity=0.469 Sum_probs=29.9
Q ss_pred ccchh-hhhhhhccccccceeeecCc---EEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 5 NDRVH-KEIMMDHALRTISYIADIGD---LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
.|.-+ .|.+.+.+||-|||.++ |. +.-+++.. . ..++.||||.++
T Consensus 68 ~~~~~~~~~l~~~~l~~ISFc~~-d~~~k~FaFI~~~-------------~-~~~f~CHvF~c~ 116 (136)
T 1wgu_A 68 ISEKNEEEVLVECRVRFLSFMGV-GKDVHTFAFIMDT-------------G-NQRFECHVFWCE 116 (136)
T ss_dssp ECSSCSSCEEEEEETTTEEEEEE-CSSTTCEEEEEEC-------------S-SSCEEEEEEECS
T ss_pred EecCCCCceeccceEEEeeeEec-CCCCcEEEEEEcC-------------C-CccEEEEEEEcC
Confidence 34444 37889999999999986 32 23333331 1 357999999765
No 395
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=32.84 E-value=50 Score=34.77 Aligned_cols=41 Identities=17% Similarity=0.403 Sum_probs=26.5
Q ss_pred ceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcC
Q psy3479 75 ILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 124 (518)
Q Consensus 75 ~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~ 124 (518)
.+||.+.-.-.| -++|.++.... + .+.+||+|++|||+++.
T Consensus 85 ~~Pf~vki~iDG----~i~V~dv~~~~----s-~I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 85 YLPYTVQKSSDG----RFYFVDIMTFS----S-EIRVGDELLEVDGAPVQ 125 (583)
T ss_dssp ECSEEEEECTTS----CEEEEEECSSC----C-SSCTTCEEEEETTEEHH
T ss_pred cCCeEEEEEECC----cEEEEeccccc----c-CCCCCCEEEEECCccHH
Confidence 467766522221 36777763222 2 49999999999999763
No 396
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=32.71 E-value=9 Score=33.24 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=47.5
Q ss_pred cceeeeceEEEEcccchhhhhHHHHHHHhhccccccc---EEEEEeecccCCCCCCCCCCCCCCCccccccccCc-hhhh
Q psy3479 217 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGD---LVVLMARRRFVSQEADEPPKISRTPKMICHVFESD-EAQF 292 (518)
Q Consensus 217 g~L~~gD~il~Vng~~~~~~~~~eav~~lk~~~~~~~---lvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 292 (518)
..|.+..+-+.+-+.......++..+..+..+....+ ......+...+ .........||+|.++ .++.
T Consensus 59 v~L~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~--------~~~~~~~~~CHVF~~~~~A~~ 130 (160)
T 2ej8_A 59 SHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSG--------RSESNLSSVCYIFESNNEGEK 130 (160)
T ss_dssp EEEEEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC--------------CEEEEEEEEESSCHHH
T ss_pred EEEEEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCc--------ccCCCccEEEEEEEcchhHHH
Confidence 3455555555554444444444555555555443222 22222332100 0001346789999877 5778
Q ss_pred HhhhccchhhhhhHHHHhhC
Q psy3479 293 IAQSIGQAFQVAYMEFLKAN 312 (518)
Q Consensus 293 ~~~s~~~~~~~~~~~~~~~~ 312 (518)
+..++|++|.++|+.+++.+
T Consensus 131 I~~tigqAF~~ay~~~l~~~ 150 (160)
T 2ej8_A 131 ICDSVGLAKQIALHAELDRR 150 (160)
T ss_dssp HHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999988654
No 397
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=30.07 E-value=11 Score=33.29 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=29.0
Q ss_pred CCccccccccCc-hhhhHhhhccchhhhhhHHHHhhC
Q psy3479 277 TPKMICHVFESD-EAQFIAQSIGQAFQVAYMEFLKAN 312 (518)
Q Consensus 277 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~ 312 (518)
.....||+|.++ .++.+..++|++|.++|+.+++.+
T Consensus 127 ~~~~~CHVF~~~~~A~~I~~tIgqAF~~ay~~~l~~~ 163 (175)
T 2ela_A 127 NLSSVCYIFESNNEGEKICDSVGLAKQIALHAELDRR 163 (175)
T ss_dssp -CEEEEEEEEESSCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CcceEEEEEEcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346789999877 577888999999999999998654
No 398
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=29.46 E-value=69 Score=25.32 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=33.2
Q ss_pred ceeEEEEc-cCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy3479 63 SDEVVVPK-AKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQ 132 (518)
Q Consensus 63 s~~v~l~k-~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~~ 132 (518)
-|.|.+.. ..|..|==-+..+. ||+. |--+|+|+| ..++||+|+=+-= ..++.+|+.
T Consensus 17 ~E~V~I~NvnNG~Rf~TYvI~Ge-GSG~-------I~lNGAAAr--l~~~GD~vII~aY---~~~~~~e~~ 74 (102)
T 3plx_B 17 YEKVQVVNVNNGARFETYTIATQ-EEGV-------VCLNGAAAR--LAEVGDKVIIMSY---ADFNEEEAK 74 (102)
T ss_dssp TCEEEEEETTTCCEEEEECEEES-STTC-------EEEEGGGGG--GCCTTCEEEEEEE---EEEEHHHHH
T ss_pred CCEEEEEECCCCcEEEEEEEEcC-CCCE-------EEeCcHHHh--ccCCCCEEEEEEc---ccCCHHHHh
Confidence 34566644 55666765555555 5432 223488888 5799999985432 234455543
No 399
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=28.14 E-value=41 Score=30.68 Aligned_cols=63 Identities=22% Similarity=0.339 Sum_probs=42.1
Q ss_pred EEEEccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHH---HHHHHhcCCC
Q psy3479 66 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLST---CQTYIKNSKN 140 (518)
Q Consensus 66 v~l~k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~---~~~~l~~~~~ 140 (518)
++++|.-.-+|.+.+...+. .++|.- +.|+| +++|..+++|||.++.|...++ +...|-+..|
T Consensus 26 ~~~~~~~~~p~~~~~~~~~~-----~~~v~~------~~~d~-~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N 91 (219)
T 2j3t_D 26 AEAEKTFSYPLDLLLKLHDE-----RVLVAF------GQRDG-IRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPAN 91 (219)
T ss_dssp -CEEEEECSSCSSEEEECSS-----SEEEEE------CCCTT-CCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGG
T ss_pred cceeeeccCCcceeeeeccc-----eeEEee------cccCC-ccccceeeecCCccCCCcccccCceeeeeeecCCC
Confidence 55566666667777765432 234432 67899 9999999999999999874443 4555554443
No 400
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=27.85 E-value=70 Score=26.68 Aligned_cols=56 Identities=23% Similarity=0.290 Sum_probs=33.7
Q ss_pred eeEEEE-ccCCcceeEEEEecCCcCCCCcEEEEEecCCChhhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy3479 64 DEVVVP-KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 131 (518)
Q Consensus 64 ~~v~l~-k~~~~~lG~~l~~~~~~~~~~~~~V~~v~~gg~A~~~G~L~~GD~Il~VNg~~l~~~~~~~~ 131 (518)
|.|.+. ...|+.|-=-+..+..|| |++. -+|+|+| ..++||+|+=+. -..++.+|+
T Consensus 42 EkV~IvNvnNG~RfeTYvI~GerGS---G~I~----lNGAAAr--l~~~GD~vII~a---Ya~~~~~E~ 98 (139)
T 2c45_A 42 EQVTIVDIDNGARLVTYAITGERGS---GVIG----INGAAAH--LVHPGDLVILIA---YATMDDARA 98 (139)
T ss_dssp CCEEEEETTTCCEEEECEEEECTTT---TCEE----EESSTTT--TSCTTCEEEEEE---CCEEEHHHH
T ss_pred CEEEEEECCCCceEEEEEEEccCCC---CEEE----EchHHHc--cCCCCCEEEEEE---CCcCCHHHh
Confidence 456664 455667776666666543 3222 2478887 579999998543 233344554
No 401
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=24.69 E-value=65 Score=33.88 Aligned_cols=28 Identities=14% Similarity=0.501 Sum_probs=21.4
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCEeC
Q psy3479 467 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 499 (518)
Q Consensus 467 ~i~I~~V~~gs~A~~aG~L~~GD~Il~VNg~~v 499 (518)
.++|..+....+ + +..||.|++|||.++
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv 124 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPV 124 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccH
Confidence 367776633222 5 999999999999998
No 402
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=24.68 E-value=11 Score=33.59 Aligned_cols=46 Identities=15% Similarity=0.372 Sum_probs=29.5
Q ss_pred ccchh-hhhhhhccccccceeee-c-CcEEEEEEeecCCCCCCCCCCCCCCCCccccccccce
Q psy3479 5 NDRVH-KEIMMDHALRTISYIAD-I-GDLVVLMARRRFVSQEADEPPKISRTPKMICHVFESD 64 (518)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~vf~s~ 64 (518)
.|.-+ .|.+.+.+||-|||+++ - -.+.-++++. . ..++.||||.++
T Consensus 68 ~d~~t~~e~l~~~~I~~ISFc~vd~d~k~FaFI~~~-------------~-~~~f~CHVF~c~ 116 (185)
T 2ysz_A 68 ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDT-------------G-NQRFECHVFWCE 116 (185)
T ss_dssp EESSCSSCEEEEECTTTCCEEECCSSTTEEEEEEES-------------S-SSCEEEEEEEES
T ss_pred EecCCCcceeeeccEEEeeeeccCCCCcEEEEEecC-------------C-CccEEEEEEEcc
Confidence 34444 36788999999999995 1 1233444431 1 347999999743
Done!