RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy348
         (293 letters)



>d1e6ba1 a.45.1.1 (A:88-220) Class zeta GST {Mouse-ear cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 133

 Score = 27.1 bits (59), Expect = 1.5
 Identities = 13/61 (21%), Positives = 16/61 (26%), Gaps = 2/61 (3%)

Query: 103 EEQLSYSENLFWWSLGITLLTVALFISARMGIYQEVLYKTHGKYPYEALYYTHLLPLPAF 162
           E+ L            I L  + L     +             YP  A  Y     LPAF
Sbjct: 61  EKLLVNCAGKHATGDEIYLADLFLAPQ--IHGAINRFQINMEPYPTLAKCYESYNELPAF 118

Query: 163 A 163
            
Sbjct: 119 Q 119


>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 217

 Score = 26.6 bits (58), Expect = 3.1
 Identities = 5/53 (9%), Positives = 20/53 (37%)

Query: 160 PAFAFLYKNLYEHWLIAVNSTPLPLPSYLSFISIPSIVFYLLGNVLTQYLCIS 212
            +   L           + ++        S   +P+++ Y  G +++ ++ ++
Sbjct: 140 SSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELISNFISVA 192


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.141    0.422 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,107,013
Number of extensions: 51734
Number of successful extensions: 145
Number of sequences better than 10.0: 1
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 9
Length of query: 293
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 208
Effective length of database: 1,240,546
Effective search space: 258033568
Effective search space used: 258033568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.0 bits)