Your job contains 1 sequence.
>psy3482
MLRAKHLANGARIRYVKKKTAFDTEIASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKK
NAQGVVVPVINYPIPSKYTLEQDLGIWGGESVIEGYRRPAHKYETQPPEYWVPHLLDHIV
YSEILDKYLNVPVTQRTVDLIHEHYGFDEYLLQTRACNLNSLIACKIKRKMLLALYDKTL
YPDDETKRETIYNKYKHYLENYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLF
RKEMIEDLKQKKLEGTLNLEEEKTKPTSLLGKLNPFAKS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3482
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031660 - symbol:mRpL28 "mitochondrial ribosomal p... 484 4.2e-49 2
UNIPROTKB|F1NTQ8 - symbol:LOC100858238 "Uncharacterized p... 382 2.4e-35 1
UNIPROTKB|Q2HJJ1 - symbol:MRPL28 "39S ribosomal protein L... 362 3.2e-33 1
RGD|1583741 - symbol:Mrpl28 "mitochondrial ribosomal prot... 347 1.3e-31 1
MGI|MGI:1915861 - symbol:Mrpl28 "mitochondrial ribosomal ... 345 2.0e-31 1
WB|WBGene00020796 - symbol:mrpl-28 species:6239 "Caenorha... 343 3.3e-31 1
UNIPROTKB|F1RGV8 - symbol:MRPL28 "Uncharacterized protein... 340 6.9e-31 1
UNIPROTKB|Q13084 - symbol:MRPL28 "39S ribosomal protein L... 337 1.4e-30 1
UNIPROTKB|Q4TT38 - symbol:MRPL28 "39S ribosomal protein L... 334 3.0e-30 1
ZFIN|ZDB-GENE-050522-113 - symbol:mrpl28 "mitochondrial r... 334 3.0e-30 1
UNIPROTKB|A2IDC6 - symbol:MRPL28 "39S ribosomal protein L... 333 3.8e-30 1
UNIPROTKB|E2R0V9 - symbol:MRPL28 "Uncharacterized protein... 317 1.9e-28 1
UNIPROTKB|Q4TT37 - symbol:MRPL28 "39S ribosomal protein L... 306 2.8e-27 1
UNIPROTKB|A2IDC7 - symbol:MRPL28 "39S ribosomal protein L... 275 5.3e-24 1
UNIPROTKB|Q8UWG8 - symbol:melanoma antigen P15 "Melanoma ... 225 1.1e-18 1
UNIPROTKB|J9NU48 - symbol:MRPL28 "Uncharacterized protein... 191 4.8e-14 1
UNIPROTKB|E1BXZ6 - symbol:LOC100858238 "Uncharacterized p... 171 7.9e-13 1
ASPGD|ASPL0000047744 - symbol:AN1970 species:162425 "Emer... 114 0.00011 1
DICTYBASE|DDB_G0281601 - symbol:DDB_G0281601 species:4468... 100 0.00048 1
>FB|FBgn0031660 [details] [associations]
symbol:mRpL28 "mitochondrial ribosomal protein L28"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS;NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS;NAS] [GO:0006412
"translation" evidence=NAS] InterPro:IPR026569 EMBL:AE014134
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 PANTHER:PTHR13528
CTD:10573 eggNOG:NOG259466 GeneTree:ENSGT00390000017359 OMA:GIWGGEA
EMBL:AY075494 RefSeq:NP_608887.1 UniGene:Dm.303
ProteinModelPortal:Q9VMX0 IntAct:Q9VMX0 MINT:MINT-1655419
PaxDb:Q9VMX0 PRIDE:Q9VMX0 EnsemblMetazoa:FBtr0078996
EnsemblMetazoa:FBtr0331227 GeneID:33715 KEGG:dme:Dmel_CG3782
FlyBase:FBgn0031660 InParanoid:Q9VMX0 OrthoDB:EOG40GB70
PhylomeDB:Q9VMX0 GenomeRNAi:33715 NextBio:784925 Bgee:Q9VMX0
GermOnline:CG3782 Uniprot:Q9VMX0
Length = 302
Score = 484 (175.4 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 100/247 (40%), Positives = 158/247 (63%)
Query: 17 KKKTAFDTEIASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKN-AQGVVVPVINYPIP 75
K+ FD + ++LPE+YRKF+ EWK+ P VHY+ + +++++ + PV N P+P
Sbjct: 16 KRPGRFDKGLGAQLPEAYRKFWREWKLTTPAAVHYIPKEQQWERDEVTHAIKPVQNIPLP 75
Query: 76 SKYTLEQDLGIWGGESVIEGYRRPAHKYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQ 135
T E GIWGGE+VI+G+++ + + + P +WVP+L +V+S +LD Y++V VT+
Sbjct: 76 LIDTPESHRGIWGGEAVIKGFQK-REQTKRRVPHFWVPNLRRSVVHSHVLDCYMSVVVTE 134
Query: 136 RTVDLIHEHYGFDEYLLQTRACNLNSLIACKIKRKMLLALYDKTLYPDDETKRET-IYNK 194
RT++ IHE +GFD YLL+ RAC+L S +A K+KR++L AL + DE +R+ + +
Sbjct: 135 RTLEQIHECHGFDHYLLKNRACDLRSALALKLKREVLQALQNGVPALADEPERQQEVLKE 194
Query: 195 YKHYLENYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKLE 254
Y+ YLE Y+ E+I+WYG + EA K+ REAE VP K+ FR ++IE L+Q +
Sbjct: 195 YRRYLEPYTPEEIDWYGHTYLEAIRKLQKQLREAE--KVVPHKLEFRGKLIEQLRQAGIS 252
Query: 255 GTLNLEE 261
LE+
Sbjct: 253 EAGKLEK 259
Score = 45 (20.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 249 KQKKLEGTLNLEEEKTKPTSLLGKLNPFAK 278
K +E LE + +S L K+NPF K
Sbjct: 272 KDSDIEALTKLESSPS--SSWLSKINPFGK 299
>UNIPROTKB|F1NTQ8 [details] [associations]
symbol:LOC100858238 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026569 GO:GO:0005739 GO:GO:0003735 PANTHER:PTHR13528
GeneTree:ENSGT00390000017359 OMA:GIWGGEA EMBL:AADN02049264
EMBL:AADN02049265 IPI:IPI00822653 Ensembl:ENSGALT00000012082
ArrayExpress:F1NTQ8 Uniprot:F1NTQ8
Length = 271
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 91/233 (39%), Positives = 132/233 (56%)
Query: 26 IASKLPESYRKFYAEWKME-KPKPVHYVEEPGRYKKNAQGVVVPVINYPIPSKYTLEQDL 84
I ++LP F A+ + +P PVH+ RY++N +G V + P+P D
Sbjct: 47 ICARLPAH---FLAQLNDDTQPTPVHWRPLGVRYRRNPRGERERVQDVPVPVFLPRAADE 103
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G+R + K T+ P+ W P L YSEILD L + VT RT+DLI +
Sbjct: 104 GLWGGEGWIRGFRYANNDKLSTRVPKIWKPQLFKRQFYSEILDAKLTITVTMRTLDLIDQ 163
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLALY--DKTLYPDDETKRETIYNKYKHYLEN 201
YGFD Y+L+T ++ S + +KR MLL L D L+PDD +RE IYNKY+ ++
Sbjct: 164 AYGFDFYILKTPKADMCSKLGMDLKRTMLLRLARRDPKLHPDDPARREAIYNKYREFV-- 221
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKLE 254
E+ EW G SL EA EK L+E+ + VPL ++ +E++ LK++ LE
Sbjct: 222 IPEEEAEWVGLSLEEAIEKQRLLEK----KDPVPLFKVYAEELVNQLKEQALE 270
>UNIPROTKB|Q2HJJ1 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR026569 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR13528 EMBL:BC105311 IPI:IPI00696397
RefSeq:NP_001039461.1 UniGene:Bt.20487 ProteinModelPortal:Q2HJJ1
STRING:Q2HJJ1 PRIDE:Q2HJJ1 Ensembl:ENSBTAT00000022057 GeneID:508216
KEGG:bta:508216 CTD:10573 eggNOG:NOG259466
GeneTree:ENSGT00390000017359 HOGENOM:HOG000010298
HOVERGEN:HBG083707 InParanoid:Q2HJJ1 OMA:GIWGGEA OrthoDB:EOG46T32C
NextBio:20868412 Uniprot:Q2HJJ1
Length = 256
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 90/232 (38%), Positives = 128/232 (55%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVH+ ++K N + G V + PIP Y E L
Sbjct: 20 IYSRLPAHYLRSLEEART--PTPVHFRPHGAKFKINPKNGQRERVEDVPIPVHYPPESQL 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE ++G+R + K+ + + W P L +YSEILD V VT RT+DLI E
Sbjct: 78 GLWGGEGWLKGHRYVNNDKFSKRVKKVWKPQLFQRELYSEILDTRFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YGFD Y+L+T +L S +KR MLL L D L+PDD +R IY+KYK ++
Sbjct: 138 AYGFDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPDDPERRAAIYDKYKAFV-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
+ EW G +L EA EK +R E + VPL ++ +E++E L+Q+ L
Sbjct: 196 IPEAEAEWVGLTLDEAVEK----QRLLEEKDPVPLFKVYVEELVEQLQQQAL 243
>RGD|1583741 [details] [associations]
symbol:Mrpl28 "mitochondrial ribosomal protein L28"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005761 "mitochondrial ribosome" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001383 InterPro:IPR026569 Pfam:PF00830 RGD:1583741
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CH473948 PANTHER:PTHR13528 CTD:10573
GeneTree:ENSGT00390000017359 OrthoDB:EOG46T32C EMBL:AC126071
IPI:IPI00204135 RefSeq:XP_001061401.2 RefSeq:XP_003750842.1
RefSeq:XP_003752357.1 RefSeq:XP_573060.3 UniGene:Rn.163110
Ensembl:ENSRNOT00000027662 GeneID:497876 KEGG:rno:497876
UCSC:RGD:1583741 NextBio:697882 Uniprot:D3ZJY1
Length = 257
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 87/240 (36%), Positives = 129/240 (53%)
Query: 18 KKTAFDTEIASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPS 76
+K I ++LP + + E + P PVHY ++K N + G V + PIP
Sbjct: 12 QKLRLQQGICARLPSHFLRSLEEERT--PTPVHYKPHGAKFKINPKNGQRERVEDVPIPV 69
Query: 77 KYTLEQDLGIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQ 135
Y E +WGGE +I GYR + K + + W P L +YSEILDK V VT
Sbjct: 70 HYPPESQQELWGGEGLILGYRYANNDKLSNRVKKVWKPQLFTRELYSEILDKKFTVTVTM 129
Query: 136 RTVDLIHEHYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYN 193
RT+DLI E YGFD Y+L+T +L S +KR MLL L D L+PD+ +R IY+
Sbjct: 130 RTLDLIDEAYGFDFYILKTPEEDLCSKFGMDLKRGMLLRLARQDPQLHPDNPERRAAIYD 189
Query: 194 KYKHYLENYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
KY++++ + EW G +L EA EK +R E + VPL ++ +E+++ L+++ L
Sbjct: 190 KYRNFV--IPEAEAEWVGLTLEEALEK----QRLLEEKDPVPLFKVYVEELVQRLQEQAL 243
>MGI|MGI:1915861 [details] [associations]
symbol:Mrpl28 "mitochondrial ribosomal protein L28"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005761 "mitochondrial ribosome"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001383 InterPro:IPR026569 Pfam:PF00830 MGI:MGI:1915861
GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 PANTHER:PTHR13528
CTD:10573 eggNOG:NOG259466 GeneTree:ENSGT00390000017359
HOGENOM:HOG000010298 HOVERGEN:HBG083707 OMA:GIWGGEA
OrthoDB:EOG46T32C EMBL:AK003727 EMBL:AK031701 EMBL:AK046544
EMBL:AK163190 EMBL:BC002293 EMBL:BC005797 EMBL:BC080753
EMBL:BC100322 EMBL:BC145680 EMBL:BC145682 IPI:IPI00271726
RefSeq:NP_077189.2 UniGene:Mm.273102 ProteinModelPortal:Q9D1B9
STRING:Q9D1B9 PhosphoSite:Q9D1B9 PaxDb:Q9D1B9 PRIDE:Q9D1B9
Ensembl:ENSMUST00000025014 GeneID:68611 KEGG:mmu:68611
UCSC:uc008bdl.2 InParanoid:A6H5Y0 NextBio:327552 Bgee:Q9D1B9
CleanEx:MM_MRPL28 Genevestigator:Q9D1B9
GermOnline:ENSMUSG00000024181 Uniprot:Q9D1B9
Length = 257
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 86/232 (37%), Positives = 127/232 (54%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I ++LP + + E + P PVHY ++K N + G V + PIP Y E
Sbjct: 20 ICARLPAHFLRSLEEERT--PTPVHYKPHGTKFKINPKNGQRERVEDVPIPVHYPPESQQ 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE +I GYR + K + + W P L +YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YGFD Y+L+T +L S +KR MLL L D L+P++ +R IY+KY+ ++
Sbjct: 138 AYGFDFYILKTPKEDLGSKFGMDLKRGMLLRLARQDPHLHPENPERRAAIYDKYRSFV-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
+ EW G +L EA EK +R E + VPL ++ +E+++ L+++ L
Sbjct: 196 IPEAEAEWVGLTLEEALEK----QRLLEEKDPVPLFKVYVEELVQRLQEQVL 243
>WB|WBGene00020796 [details] [associations]
symbol:mrpl-28 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR026569 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0003735 PANTHER:PTHR13528 eggNOG:NOG259466
GeneTree:ENSGT00390000017359 HOGENOM:HOG000010298 OMA:GIWGGEA
EMBL:FO081615 PIR:T33373 RefSeq:NP_493672.1
ProteinModelPortal:O76606 SMR:O76606 STRING:O76606 PaxDb:O76606
EnsemblMetazoa:T25D3.2 GeneID:173400 KEGG:cel:CELE_T25D3.2
UCSC:T25D3.2 CTD:173400 WormBase:T25D3.2 InParanoid:O76606
NextBio:879493 Uniprot:O76606
Length = 310
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 94/269 (34%), Positives = 142/269 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNA-QGVVVPVINYPIPSKYTLEQDL 84
+ +LPE Y+ Y E + PVHY R+ ++ + V + + PI T E D
Sbjct: 41 VVHRLPEHYKTRYWETILSDKTPVHYRPPTSRFAHDSFKNVEIELEENPIIGIRTPEGDD 100
Query: 85 GIWGGESVIEGYRRPAHKYETQP--PEYWVPHL----LDHIV-YSEILDKYLNVPVTQRT 137
G+WGGE V++G+ A Y + P YWVP L L ++V YSEILDKY+ V VT+R
Sbjct: 101 GLWGGERVVKGWIESA-PYTKKKILPRYWVPKLFFPALKNVVLYSEILDKYIKVTVTERA 159
Query: 138 VDLIHEHYGFDEYLLQTRACNLNSLIACKIKRKMLLALYDKTLYPDDETKRETIYNKYKH 197
+ LI EH+G D Y+L+++ +L+S A +KR+MLL L ++ Y +++ K+ I KY
Sbjct: 160 MRLIDEHFGLDYYILESKEIDLDSKFANSLKREMLLTLTTESYYEENDEKKAYIKEKYAD 219
Query: 198 YLENYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKLEGTL 257
++ + EW G L EA K +E ++ + PLK F + ++E L+ E +
Sbjct: 220 FV--IPEREAEWIGLELNEAARKQQDME---DSTAPEPLKYKFEQSLLERLRDGTDEISQ 274
Query: 258 NLE--EEKTKPTS-----LLGK-LNPFAK 278
LE E K S + GK LNP K
Sbjct: 275 ELENPEAPMKTESKFGDKMFGKYLNPIGK 303
>UNIPROTKB|F1RGV8 [details] [associations]
symbol:MRPL28 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR026569 GO:GO:0005739 GO:GO:0003735 PANTHER:PTHR13528
GeneTree:ENSGT00390000017359 OMA:GIWGGEA EMBL:FP103065
RefSeq:XP_003124744.1 UniGene:Ssc.55033 Ensembl:ENSSSCT00000008748
GeneID:100524194 KEGG:ssc:100524194 Uniprot:F1RGV8
Length = 256
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 87/232 (37%), Positives = 124/232 (53%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQGVVVP-VINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + V + PIP Y E L
Sbjct: 20 IYSRLPRHYLRSLEEART--PTPVHYRPHGAKFKINPKNWQRERVEDVPIPVHYPPESQL 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE + G+R + K + + W P L +YSEILDK V VT RT+DLI +
Sbjct: 78 GLWGGEGWVLGHRYVNNDKLSKRVRKVWKPQLFQRELYSEILDKRFTVTVTMRTLDLIDQ 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
GFD Y+L+T +L S +KR MLL L D L+PDD +R IY++YK ++
Sbjct: 138 ACGFDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPDDPARRAAIYDRYKAFV-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
+ EW G +L EA EK +R E + +PL +F +E++ L+Q+ L
Sbjct: 196 IPEAEAEWVGLTLDEAVEK----QRLLEEKDPIPLFKIFVEELLGQLQQQAL 243
>UNIPROTKB|Q13084 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=NAS] [GO:0005761 "mitochondrial ribosome"
evidence=IDA;NAS] [GO:0006412 "translation" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR026569 GO:GO:0006412 EMBL:CH471112 GO:GO:0003735
EMBL:AE006463 GO:GO:0005761 EMBL:Z97634 PANTHER:PTHR13528 CTD:10573
eggNOG:NOG259466 HOVERGEN:HBG083707 EMBL:AK315180 EMBL:BC000507
EMBL:BC000990 EMBL:U19796 EMBL:BT009857 IPI:IPI00172594
RefSeq:NP_006419.2 UniGene:Hs.513230 ProteinModelPortal:Q13084
IntAct:Q13084 MINT:MINT-1383002 STRING:Q13084 PhosphoSite:Q13084
DMDM:85695426 PaxDb:Q13084 PRIDE:Q13084 DNASU:10573
Ensembl:ENST00000199706 Ensembl:ENST00000389675 GeneID:10573
KEGG:hsa:10573 UCSC:uc002cgs.2 GeneCards:GC16M000357
HGNC:HGNC:14484 HPA:HPA030594 MIM:604853 neXtProt:NX_Q13084
PharmGKB:PA30515 GenomeRNAi:10573 NextBio:40127 ArrayExpress:Q13084
Bgee:Q13084 CleanEx:HS_MRPL28 Genevestigator:Q13084
GermOnline:ENSG00000086504 Uniprot:Q13084
Length = 256
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 89/232 (38%), Positives = 122/232 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + G V + PIP + E
Sbjct: 20 ICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQR 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G + K + + W P L + YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YG D Y+L+T +L S +KR MLL L D L+P+D +R IY+KYK +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFA-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
E+ EW G +L EA EK +R E + VPL ++ E+I+ L+Q+ L
Sbjct: 196 IPEEEAEWVGLTLEEAIEK----QRLLEEKDPVPLFKIYVAELIQQLQQQAL 243
>UNIPROTKB|Q4TT38 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR026569
GO:GO:0005739 GO:GO:0005840 GO:GO:0003735 EMBL:AC005202 EMBL:Z97634
PANTHER:PTHR13528 HOGENOM:HOG000010298 HOVERGEN:HBG083707
OMA:GIWGGEA OrthoDB:EOG46T32C UniGene:Hs.513230 HGNC:HGNC:14484
IPI:IPI00719120 Ensembl:ENST00000397734 Ensembl:ENST00000397735
Uniprot:Q4TT38
Length = 256
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 88/232 (37%), Positives = 121/232 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + G V + PIP + E
Sbjct: 20 ICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQR 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G + K + + W P L + YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YG D Y+L+ +L S +KR MLL L D L+P+D +R IY+KYK +
Sbjct: 138 AYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFA-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
E+ EW G +L EA EK +R E + VPL ++ E+I+ L+Q+ L
Sbjct: 196 IPEEEAEWVGLTLEEAIEK----QRLLEEKDPVPLFKIYVAELIQQLQQQAL 243
>ZFIN|ZDB-GENE-050522-113 [details] [associations]
symbol:mrpl28 "mitochondrial ribosomal protein L28"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR026569 ZFIN:ZDB-GENE-050522-113 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR13528 CTD:10573 HOVERGEN:HBG083707
EMBL:BC095131 IPI:IPI00503064 RefSeq:NP_001019570.1
UniGene:Dr.45778 ProteinModelPortal:Q503Y2 STRING:Q503Y2
GeneID:554098 KEGG:dre:554098 InParanoid:Q503Y2 NextBio:20880665
ArrayExpress:Q503Y2 Uniprot:Q503Y2
Length = 252
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 86/232 (37%), Positives = 122/232 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQGVVVP-VINYPIPSKYTLEQDL 84
I ++LP+ Y + + P VH+ +Y+ N V + PIP Y E
Sbjct: 20 IYARLPQHYLRSLQD--TSPPTTVHWKPLGVKYRINPDTRQRERVQDVPIPIYYPPESQD 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G+R K T+ P+ W P L +YSEILD+ +V VT R +DLI
Sbjct: 78 GLWGGEGWISGFRYAKDDKLSTRLPKTWKPQLFTRELYSEILDQKFSVTVTSRALDLIDA 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLALY--DKTLYPDDETKRETIYNKYKHYLEN 201
+GFD Y+L+T +LNS +KR MLL L D LYP+D+ ++E IY +YK +
Sbjct: 138 AFGFDFYILKTPKQDLNSKFGMNLKRAMLLRLARKDTDLYPEDQQRKEKIYKRYKQF--E 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
E+ EW G SL EA EK L+E+ + PL K ++++L KKL
Sbjct: 196 VPEEEAEWVGLSLEEAVEKQRLLEK----KDPEPLYKGLVKSLVQELALKKL 243
>UNIPROTKB|A2IDC6 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026569 GO:GO:0005739 GO:GO:0005840 GO:GO:0003735
EMBL:AC005202 EMBL:Z97634 PANTHER:PTHR13528 HOGENOM:HOG000010298
HOVERGEN:HBG083707 UniGene:Hs.513230 HGNC:HGNC:14484
IPI:IPI00852855 Ensembl:ENST00000441883 Uniprot:A2IDC6
Length = 240
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 88/229 (38%), Positives = 120/229 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + G V + PIP + E
Sbjct: 20 ICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQR 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G + K + + W P L + YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YG D Y+L+T +L S +KR MLL L D L+P+D +R IY+KYK +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFA-- 195
Query: 202 YSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQ 250
E+ EW G +L EA EK +R E + VPL ++ E+I+ L+Q
Sbjct: 196 IPEEEAEWVGLTLEEAIEK----QRLLEEKDPVPLFKIYVAELIQQLQQ 240
>UNIPROTKB|E2R0V9 [details] [associations]
symbol:MRPL28 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR026569 GO:GO:0003735 PANTHER:PTHR13528
CTD:10573 GeneTree:ENSGT00390000017359 OMA:GIWGGEA
EMBL:AAEX03004692 RefSeq:XP_537023.3 Ensembl:ENSCAFT00000031293
GeneID:479897 KEGG:cfa:479897 Uniprot:E2R0V9
Length = 257
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 89/245 (36%), Positives = 125/245 (51%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEP-GRYK-KNAQGVVVPVINYPIPSKYTLEQD 83
I S+LP Y + E + P PVHY G A G V + PIP E
Sbjct: 20 ICSRLPPHYLRSLQEARA--PAPVHYRPRGVGAGAGAGAGGRRERVQDVPIPVYRPPEAQ 77
Query: 84 LGIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIH 142
LG+WGGE + GYR K + + W P LL +YSEILD V VT RT+DLI
Sbjct: 78 LGLWGGEGWVVGYRYVGDDKLSKRVKKVWKPQLLQRELYSEILDTKFAVTVTARTLDLID 137
Query: 143 EHYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLE 200
YGFD Y+L+T +L S +KR MLL L D L+PD+ KR I++KYK ++
Sbjct: 138 AAYGFDFYILKTPEEDLCSKFGMDLKRGMLLRLARQDPQLHPDNPQKRAAIFDKYKEFV- 196
Query: 201 NYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKLEGTLNLE 260
+ EW G +L EA EK +R E + PL ++ +E+I L+Q+ L + ++
Sbjct: 197 -IPEAEAEWVGLTLDEAVEK----QRLLEEKDPTPLFKVYVEELIGQLEQQALSEPVVVQ 251
Query: 261 EEKTK 265
+ ++
Sbjct: 252 KRASR 256
>UNIPROTKB|Q4TT37 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026569 GO:GO:0005739 GO:GO:0005840 GO:GO:0003735
EMBL:AC005202 EMBL:Z97634 PANTHER:PTHR13528 HOGENOM:HOG000010298
HOVERGEN:HBG083707 UniGene:Hs.513230 HGNC:HGNC:14484
IPI:IPI00658191 Ensembl:ENST00000447696 Uniprot:Q4TT37
Length = 218
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 79/199 (39%), Positives = 104/199 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + G V + PIP + E
Sbjct: 20 ICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQR 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G + K + + W P L + YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHYLEN 201
YG D Y+L+T +L S +KR MLL L D L+P+D +R IY+KYK +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFA-- 195
Query: 202 YSREDIEWYGWSLPEAQEK 220
E+ EW G +L EA EK
Sbjct: 196 IPEEEAEWVGLTLEEAIEK 214
>UNIPROTKB|A2IDC7 [details] [associations]
symbol:MRPL28 "39S ribosomal protein L28, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026569 GO:GO:0005739 GO:GO:0005840 GO:GO:0003735
EMBL:AC005202 EMBL:Z97634 PANTHER:PTHR13528 HOGENOM:HOG000010298
HOVERGEN:HBG083707 UniGene:Hs.513230 HGNC:HGNC:14484
IPI:IPI00852785 Ensembl:ENST00000450882 Uniprot:A2IDC7
Length = 194
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 70/177 (39%), Positives = 93/177 (52%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEPGRYKKNAQ-GVVVPVINYPIPSKYTLEQDL 84
I S+LP Y + E + P PVHY ++K N + G V + PIP + E
Sbjct: 20 ICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQR 77
Query: 85 GIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHE 143
G+WGGE I G + K + + W P L + YSEILDK V VT RT+DLI E
Sbjct: 78 GLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDE 137
Query: 144 HYGFDEYLLQTRACNLNSLIACKIKRKMLLAL--YDKTLYPDDETKRETIYNKYKHY 198
YG D Y+L+T +L S +KR MLL L D L+P+D +R IY+KYK +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF 194
>UNIPROTKB|Q8UWG8 [details] [associations]
symbol:melanoma antigen P15 "Melanoma antigen P15"
species:9031 "Gallus gallus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR026569 GO:GO:0003735
EMBL:AY016020 PANTHER:PTHR13528 eggNOG:NOG259466
GeneTree:ENSGT00390000017359 EMBL:AADN02049264 EMBL:AADN02049265
IPI:IPI00587930 UniGene:Gga.7776 STRING:Q8UWG8
Ensembl:ENSGALT00000021958 NextBio:20827828 Uniprot:Q8UWG8
Length = 123
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 51/121 (42%), Positives = 75/121 (61%)
Query: 136 RTVDLIHEHYGFDEYLLQTRACNLNSLIACKIKRKMLLALY--DKTLYPDDETKRETIYN 193
RT+DLI + YGFD Y+L+T ++ S + +KR MLL L D L+PDD +RE IYN
Sbjct: 2 RTLDLIDQAYGFDFYILKTPKADMCSKLGMDLKRTMLLRLARRDPKLHPDDPARREAIYN 61
Query: 194 KYKHYLENYSREDIEWYGWSLPEAQEKIILIEREAEARSKVPLKVLFRKEMIEDLKQKKL 253
KY+ ++ E+ EW G SL EA EK L+E+ + VPL ++ +E++ LK++ L
Sbjct: 62 KYREFV--IPEEEAEWVGLSLEEAIEKQRLLEK----KDPVPLFKVYAEELVNQLKEQAL 115
Query: 254 E 254
E
Sbjct: 116 E 116
>UNIPROTKB|J9NU48 [details] [associations]
symbol:MRPL28 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR026569 GO:GO:0003735 PANTHER:PTHR13528
GeneTree:ENSGT00390000017359 EMBL:AAEX03004692
Ensembl:ENSCAFT00000048692 Uniprot:J9NU48
Length = 278
Score = 191 (72.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 53/131 (40%), Positives = 65/131 (49%)
Query: 26 IASKLPESYRKFYAEWKMEKPKPVHYVEEP-GRYK-KNAQGVVVPVINYPIPSKYTLEQD 83
I S+LP Y + E + P PVHY G A G V + PIP E
Sbjct: 80 ICSRLPPHYLRSLQEARA--PAPVHYRPRGVGAGAGAGAGGRRERVQDVPIPVYRPPEAQ 137
Query: 84 LGIWGGESVIEGYRRPAH-KYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIH 142
LG+WGGE + GYR K + + W P LL +YSEILD V VT RT+DLI
Sbjct: 138 LGLWGGEGWVVGYRYVGDDKLSKRVKKVWKPQLLQRELYSEILDTKFAVTVTARTLDLID 197
Query: 143 EHYGFDEYLLQ 153
YGFD Y+L+
Sbjct: 198 AAYGFDFYILK 208
>UNIPROTKB|E1BXZ6 [details] [associations]
symbol:LOC100858238 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR026569 GO:GO:0003735 PANTHER:PTHR13528
GeneTree:ENSGT00390000017359 EMBL:AADN02049264 EMBL:AADN02049265
IPI:IPI00818585 Ensembl:ENSGALT00000039682
Ensembl:ENSGALT00000039683 Uniprot:E1BXZ6
Length = 104
Score = 171 (65.3 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 44/105 (41%), Positives = 61/105 (58%)
Query: 136 RTVDLIHEHYGFDEYLLQTRA-----C------NLNSLIACKIKRKMLLALY--DKTLYP 182
RT+DLI + YGFD Y+L+ R C ++ S + +KR MLL L D L+P
Sbjct: 2 RTLDLIDQAYGFDFYILKARPRRGPDCPRTPKADMCSKLGMDLKRTMLLRLARRDPKLHP 61
Query: 183 DDETKRETIYNKYKHYLENYSREDIEWYGWSLPEAQEKIILIERE 227
DD +RE IYNKY+ ++ E+ EW G SL EA EK L+E++
Sbjct: 62 DDPARREAIYNKYREFV--IPEEEAEWVGLSLEEAIEKQRLLEKK 104
>ASPGD|ASPL0000047744 [details] [associations]
symbol:AN1970 species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001383 InterPro:IPR026569 Pfam:PF00830 GO:GO:0006412
EMBL:BN001307 GO:GO:0005840 GO:GO:0003735 EMBL:AACD01000029
eggNOG:COG0227 PANTHER:PTHR13528 OrthoDB:EOG4F21CZ
RefSeq:XP_659574.1 ProteinModelPortal:Q5BBW0 STRING:Q5BBW0
EnsemblFungi:CADANIAT00008630 GeneID:2875099 KEGG:ani:AN1970.2
HOGENOM:HOG000190886 OMA:KTRRFWK Uniprot:Q5BBW0
Length = 203
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 72 YPIPSKYTLEQ-DLGIWGGESVIEGYRRPAHKYETQPPEYWVPHLLDHIVYSEILDKYLN 130
YP Y Q + G++GG ++ G + + E + +W P++ ++SE L ++L
Sbjct: 42 YPYGPNYMFRQSNTGLYGGATIQFGNKISQGRNEGKTRRFWKPNVRRKKLWSEALQQFLF 101
Query: 131 VPVTQRTVDLIHEHYGFDEYLLQTRACNLNSL 162
+ VT++ + I + G D+YLL R + L
Sbjct: 102 IKVTRKALRTIRKAGGLDQYLLDDRPARIKEL 133
>DICTYBASE|DDB_G0281601 [details] [associations]
symbol:DDB_G0281601 species:44689 "Dictyostelium
discoideum" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001383
InterPro:IPR026569 Pfam:PF00830 dictyBase:DDB_G0281601
GO:GO:0006412 GO:GO:0005840 EMBL:AAFI02000042 GO:GO:0003735
eggNOG:COG0227 PANTHER:PTHR13528 RefSeq:XP_640528.1
ProteinModelPortal:Q54TR3 EnsemblProtists:DDB0204554 GeneID:8623138
KEGG:ddi:DDB_G0281601 InParanoid:Q54TR3 OMA:CIDKAGS
ProtClustDB:CLSZ2430522 Uniprot:Q54TR3
Length = 142
Score = 100 (40.3 bits), Expect = 0.00048, P = 0.00048
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 85 GIWGGESVIEGYRRPAHKYETQPPEYWVPHLLDHIVYSEILDKYLNVPVTQRTVDLIHEH 144
G++GG+ +I + +T+ W P++ +S++LD + V +T T+ I +
Sbjct: 23 GLYGGKDIIFSDQSSFSTRKTR--RTWKPNVQTKTYHSDVLDSNIRVSLTTYTIRCIDKA 80
Query: 145 YGFDEYLLQTRACNLNSLIACKIKRKMLLALYDKTLYPDDETKRE 189
FD Y++ T+ +L S + +K M L K L + K+E
Sbjct: 81 GSFDNYIIHTKDKDLASELGSDLKVAMKHELQKKALLILENEKQE 125
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 279 0.00081 115 3 11 22 0.40 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 614 (65 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 26.68u 0.07s 26.75t Elapsed: 00:00:21
Total cpu time: 26.68u 0.07s 26.75t Elapsed: 00:00:23
Start: Thu Aug 15 12:19:13 2013 End: Thu Aug 15 12:19:36 2013