Your job contains 1 sequence.
>psy3486
MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIH
IPFISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRID
QSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKD
AKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQMKR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3486
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 441 1.4e-41 1
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 435 5.9e-41 1
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 432 1.2e-40 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 432 1.2e-40 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 432 1.2e-40 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 432 1.2e-40 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 432 1.2e-40 1
UNIPROTKB|F1SQG5 - symbol:COPS2 "Uncharacterized protein"... 432 1.2e-40 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 411 2.1e-38 1
WB|WBGene00000814 - symbol:csn-2 species:6239 "Caenorhabd... 373 2.2e-34 1
UNIPROTKB|O01422 - symbol:csn-2 "COP9 signalosome complex... 373 2.2e-34 1
TAIR|locus:2059289 - symbol:FUS12 "FUSCA 12" species:3702... 325 2.7e-29 1
ASPGD|ASPL0000076227 - symbol:csnB species:162425 "Emeric... 259 1.2e-21 1
DICTYBASE|DDB_G0289361 - symbol:csn2 "proteasome componen... 250 7.8e-21 1
UNIPROTKB|G5EHS2 - symbol:MGCH7_ch7g1103 "COP9 signalosom... 248 2.1e-20 1
POMBASE|SPAPB17E12.04c - symbol:csn2 "COP9/signalosome co... 181 2.8e-13 1
CGD|CAL0004448 - symbol:orf19.1400 species:5476 "Candida ... 116 0.00043 1
UNIPROTKB|Q59YC7 - symbol:CSN2 "Potential COP9 signalosom... 116 0.00043 1
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 85/97 (87%), Positives = 90/97 (92%)
Query: 123 NYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDAK 182
NY EMM RYKQLL YIKSAVTRN+SEKSINSILDYISTSKNM LLQ+FYETTL+AL+DAK
Sbjct: 85 NYDEMMVRYKQLLTYIKSAVTRNHSEKSINSILDYISTSKNMALLQNFYETTLDALRDAK 144
Query: 183 NDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
NDRLWFKTNTKLGKLYFDR DF KL +ILKQLHQSCQ
Sbjct: 145 NDRLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQ 181
Score = 180 (68.4 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 48/121 (39%), Positives = 66/121 (54%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I L S+++ + R HI
Sbjct: 293 NPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINEFETILRQHRSNIMAD---QFIREHIE 349
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLI+PY I IPFI+ LNIE ++VESLLVS ILD+T++GRIDQ
Sbjct: 350 DLLR--NIRTQ-VLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQV 406
Query: 123 N 123
N
Sbjct: 407 N 407
Score = 177 (67.4 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 36/48 (75%), Positives = 40/48 (83%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDV 48
M D FIREHIEDLLRNIRTQVLIKLI+PY I IPFI+ LNIE ++V
Sbjct: 339 MADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEV 386
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE+F KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTINGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 142
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 180
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 338 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391
Score = 224 (83.9 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 292 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 348
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 349 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 123 N 123
N
Sbjct: 406 N 406
>UNIPROTKB|F1SQG5 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR011990 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
InterPro:IPR019280 Pfam:PF10075 EMBL:CU041367 EMBL:CU407149
Ensembl:ENSSSCT00000005137 ArrayExpress:F1SQG5 Uniprot:F1SQG5
Length = 385
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 81/98 (82%), Positives = 92/98 (93%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDA 181
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETTLEALKDA
Sbjct: 75 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA 134
Query: 182 KNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
KNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 135 KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 172
Score = 219 (82.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLI 53
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LN+ SD+ LI
Sbjct: 330 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKKLNLSFSDLQYVLI 382
Score = 148 (57.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/108 (36%), Positives = 58/108 (53%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 284 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 340
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLI 110
+ R NI T VLIKLIKPYTRIHIPFIS++LN+ SD++ +L+ I
Sbjct: 341 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKKLNLSFSDLQYVLILCI 385
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 81/105 (77%), Positives = 92/105 (87%)
Query: 122 SNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKN-------MELLQDFYETT 174
+N+ EMM+RYKQLL YI+SAVTRNYSEKSINSILDYISTSK M+LLQ+FYETT
Sbjct: 83 TNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQNSDFLCQMDLLQEFYETT 142
Query: 175 LEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
LEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQ
Sbjct: 143 LEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ 187
Score = 224 (83.9 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIK 54
MDDPFIREHIE+LLRNIRTQVLIKLIKPYTRIHIPFIS++LNI+ +DV L++
Sbjct: 345 MDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 398
Score = 224 (83.9 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + L+ Y I + L S+++ P+ R HI
Sbjct: 299 NPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDD---PFIREHIE 355
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ R NI T VLIKLIKPYTRIHIPFIS++LNI+ +DVESLLV ILDNT+ GRIDQ
Sbjct: 356 ELLR--NIRTQ-VLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 412
Query: 123 N 123
N
Sbjct: 413 N 413
>WB|WBGene00000814 [details] [associations]
symbol:csn-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0018991 GO:GO:0040010
GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV EMBL:FO080100 PIR:T25440 RefSeq:NP_491740.1
ProteinModelPortal:O01422 SMR:O01422 DIP:DIP-24665N IntAct:O01422
MINT:MINT-1040695 STRING:O01422 PaxDb:O01422 PRIDE:O01422
EnsemblMetazoa:B0025.2.1 EnsemblMetazoa:B0025.2.2
EnsemblMetazoa:B0025.2.3 GeneID:172278 KEGG:cel:CELE_B0025.2
UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 71/109 (65%), Positives = 89/109 (81%)
Query: 111 LDNTVRGRIDQSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDF 170
L ++ Q+ ++M+ Y+QLL YIKSAVT+NYSEKSIN+ILDYISTS+ M+LLQ F
Sbjct: 69 LKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSEKSINAILDYISTSRQMDLLQHF 128
Query: 171 YETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
YETTL+ALKDAKN+RLWFKTNTKLGKL+FD +F KL +I+KQL SC+
Sbjct: 129 YETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCK 177
Score = 155 (59.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLI 53
M DPFIREH E+L+ NIRTQVL++LI+PYT + I ++S++L + +V+ L+
Sbjct: 338 MADPFIREHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLV 390
Score = 121 (47.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 55 PYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNT 114
P+ R H + NI T VL++LI+PYT + I ++S++L + +V LLV ILD+
Sbjct: 341 PFIREHTEELMN--NIRTQ-VLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDG 397
Query: 115 VRGRI-DQSNYKEMMSRYKQLLLYIKSAVTRNYSEK 149
+ +I ++S EM K+++ + S V N ++
Sbjct: 398 LEAKINEESGMIEMPKNKKKMM--VTSLVVPNAGDQ 431
>UNIPROTKB|O01422 [details] [associations]
symbol:csn-2 "COP9 signalosome complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV EMBL:FO080100 PIR:T25440
RefSeq:NP_491740.1 ProteinModelPortal:O01422 SMR:O01422
DIP:DIP-24665N IntAct:O01422 MINT:MINT-1040695 STRING:O01422
PaxDb:O01422 PRIDE:O01422 EnsemblMetazoa:B0025.2.1
EnsemblMetazoa:B0025.2.2 EnsemblMetazoa:B0025.2.3 GeneID:172278
KEGG:cel:CELE_B0025.2 UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 71/109 (65%), Positives = 89/109 (81%)
Query: 111 LDNTVRGRIDQSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDF 170
L ++ Q+ ++M+ Y+QLL YIKSAVT+NYSEKSIN+ILDYISTS+ M+LLQ F
Sbjct: 69 LKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSEKSINAILDYISTSRQMDLLQHF 128
Query: 171 YETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
YETTL+ALKDAKN+RLWFKTNTKLGKL+FD +F KL +I+KQL SC+
Sbjct: 129 YETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCK 177
Score = 155 (59.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLI 53
M DPFIREH E+L+ NIRTQVL++LI+PYT + I ++S++L + +V+ L+
Sbjct: 338 MADPFIREHTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLV 390
Score = 121 (47.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 55 PYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNT 114
P+ R H + NI T VL++LI+PYT + I ++S++L + +V LLV ILD+
Sbjct: 341 PFIREHTEELMN--NIRTQ-VLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDG 397
Query: 115 VRGRI-DQSNYKEMMSRYKQLLLYIKSAVTRNYSEK 149
+ +I ++S EM K+++ + S V N ++
Sbjct: 398 LEAKINEESGMIEMPKNKKKMM--VTSLVVPNAGDQ 431
>TAIR|locus:2059289 [details] [associations]
symbol:FUS12 "FUSCA 12" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0009585
EMBL:AC005623 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 EMBL:AF395058 EMBL:AY050437 EMBL:AY133536
EMBL:AY087622 IPI:IPI00525604 PIR:D84667 RefSeq:NP_565632.1
UniGene:At.13162 ProteinModelPortal:Q8W207 SMR:Q8W207 IntAct:Q8W207
STRING:Q8W207 PaxDb:Q8W207 PRIDE:Q8W207 EnsemblPlants:AT2G26990.1
GeneID:817241 KEGG:ath:AT2G26990 TAIR:At2g26990 eggNOG:COG5159
HOGENOM:HOG000194333 InParanoid:Q8W207 KO:K12176 OMA:SNSEPDV
PhylomeDB:Q8W207 ProtClustDB:CLSN2688459 Genevestigator:Q8W207
GermOnline:AT2G26990 Uniprot:Q8W207
Length = 439
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 62/111 (55%), Positives = 86/111 (77%)
Query: 111 LDNTVRGRIDQSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYIS--TSKNMELLQ 168
L TV+ YKEMM Y ++L YIKSAVTRNYSEK IN+I+D++S S+N LLQ
Sbjct: 66 LKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNTGLLQ 125
Query: 169 DFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
+FY+TTL+AL++AKN+RLWFKTN KL ++FD ++ ++++ILK+LH+SCQ
Sbjct: 126 EFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQ 176
Score = 190 (71.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 42/73 (57%), Positives = 56/73 (76%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDV---LIKLIKPYT 57
MDDPFIR ++EDLL+ +RTQVL+KLIKPYT+I IPFIS++LN+ +DV L+ LI +
Sbjct: 334 MDDPFIRNYMEDLLKKVRTQVLLKLIKPYTKIGIPFISKELNVPETDVTELLVSLILD-S 392
Query: 58 RI--HIPFISRQL 68
RI HI ++R L
Sbjct: 393 RIDGHIDEMNRYL 405
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 42/121 (34%), Positives = 66/121 (54%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + + + + LI Y R I R L ++ P+ R ++
Sbjct: 288 NPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDD---PFIRNYME 344
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
+ +++ + VL+KLIKPYT+I IPFIS++LN+ +DV LLVSLILD+ + G ID+
Sbjct: 345 DLLKKVRTQ---VLLKLIKPYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDEM 401
Query: 123 N 123
N
Sbjct: 402 N 402
>ASPGD|ASPL0000076227 [details] [associations]
symbol:csnB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
EMBL:AACD01000081 RefSeq:XP_662387.1 STRING:Q5B3U7
EnsemblFungi:CADANIAT00005639 GeneID:2872575 KEGG:ani:AN4783.2
OrthoDB:EOG4PZNGN Uniprot:Q5B3U7
Length = 506
Score = 259 (96.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 46/113 (40%), Positives = 75/113 (66%)
Query: 111 LDNTVRGRIDQSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTS----KNMEL 166
L ++ Y + + Y++LL Y+KSAVTRNYSEKSIN++LDYI K +
Sbjct: 73 LKQAIKLEFKLGRYSDAVEHYRELLTYVKSAVTRNYSEKSINNMLDYIEKGSDDEKAYQC 132
Query: 167 LQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
+++FY TL + ++ N+RLW KTN KL +L+ +R ++ +LS+ +++LH++CQ
Sbjct: 133 MEEFYSLTLNSFQNTNNERLWLKTNIKLARLWLERREYGQLSKKVRELHRACQ 185
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNI---ETSDVLIKLI 53
DPFI E+I+++ RN+RT+ ++KLI PYTR + FIS+ + I E D+L LI
Sbjct: 344 DPFIAENIDEVSRNMRTKAILKLIAPYTRFTLSFISKHIKISVTEAQDILSFLI 397
>DICTYBASE|DDB_G0289361 [details] [associations]
symbol:csn2 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0289361 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CM000154_GR EMBL:AAFI02000139
Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 KO:K12176 OMA:SNSEPDV EMBL:DQ309430
RefSeq:XP_636285.1 ProteinModelPortal:Q54HL6 STRING:Q54HL6
EnsemblProtists:DDB0233100 GeneID:8627103 KEGG:ddi:DDB_G0289361
ProtClustDB:CLSZ2429788 Uniprot:Q54HL6
Length = 449
Score = 250 (93.1 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 43/101 (42%), Positives = 74/101 (73%)
Query: 123 NYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMEL--LQDFYETTLEALKD 180
++ M+ +K+ L Y KS+ + NY EK INS+LD +S+S +EL +Q ++ TL++L D
Sbjct: 86 DFDNMLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKSLLD 145
Query: 181 AKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQMK 221
KN+R+WF+TN KL KL F++ ++ +L++IL+ LH+SC+++
Sbjct: 146 TKNERVWFRTNLKLAKLLFEKAEYGRLAKILRDLHKSCELE 186
Score = 209 (78.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 50/91 (54%), Positives = 63/91 (69%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDV---LIKLIKPYT 57
MDDPFIR +IEDLLRNIRTQVL+KL+KPYTRI I FIS++LNI +SDV L+ LI
Sbjct: 342 MDDPFIRMYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNK 401
Query: 58 -RIHIPFISRQLNIETSDVLIKLIKPYTRIH 87
R I +++QL ++T+ YT IH
Sbjct: 402 IRGSIDQVNQQLELDTAKS--SAYWKYTSIH 430
Score = 200 (75.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 44/69 (63%), Positives = 54/69 (78%)
Query: 55 PYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNT 114
P+ R++I + R NI T VL+KL+KPYTRI I FIS++LNI +SDVESLLVSLILDN
Sbjct: 345 PFIRMYIEDLLR--NIRTQ-VLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNK 401
Query: 115 VRGRIDQSN 123
+RG IDQ N
Sbjct: 402 IRGSIDQVN 410
>UNIPROTKB|G5EHS2 [details] [associations]
symbol:MGCH7_ch7g1103 "COP9 signalosome complex subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 EMBL:CM000230 EMBL:CM001237 InterPro:IPR013143
SMART:SM00753 KO:K12176 RefSeq:XP_003720496.1
ProteinModelPortal:G5EHS2 EnsemblFungi:MGG_10325T0 GeneID:2681900
KEGG:mgr:MGG_10325 Uniprot:G5EHS2
Length = 522
Score = 248 (92.4 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 47/114 (41%), Positives = 75/114 (65%)
Query: 111 LDNTVRGRIDQSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYIS-----TSKNME 165
L ++ +Y + + YK+LL Y+KSAVTRNYSEKSIN++LD+I + + +
Sbjct: 73 LKQAIKLEFKMQHYDKAIEHYKELLTYVKSAVTRNYSEKSINNMLDHIEKGAGGSPEAGK 132
Query: 166 LLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQ 219
+++FY TL ++ N+RLW KTN KL KL DR+++ ++R L++LH+SC+
Sbjct: 133 CMEEFYSLTLACFQNTNNERLWLKTNIKLCKLLLDRKEYGTVTRKLRELHKSCE 186
>POMBASE|SPAPB17E12.04c [details] [associations]
symbol:csn2 "COP9/signalosome complex subunit Csn2"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAPB17E12.04c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV OrthoDB:EOG4PZNGN EMBL:AF314168 RefSeq:NP_001018220.1
ProteinModelPortal:Q9HFR0 IntAct:Q9HFR0 STRING:Q9HFR0
EnsemblFungi:SPAPB17E12.04c.1 GeneID:3361420
KEGG:spo:SPAPB17E12.04c NextBio:20811469 Uniprot:Q9HFR0
Length = 437
Score = 181 (68.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 33/94 (35%), Positives = 62/94 (65%)
Query: 124 YKEMMSRYKQLLLYIK-SAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDAK 182
Y +M+ Y++LL Y ++T+NYSEKSI +I++Y S+ +N E L+ FY+ T +AL++
Sbjct: 85 YDDMLQSYQRLLGYTNWLSITKNYSEKSIYNIVEYASSCENTEFLEKFYDVTTKALQNLN 144
Query: 183 NDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQ 216
N+RL K + + +++++K +L+Q+H+
Sbjct: 145 NERLMLKVLMHVARFLLTQKNYHKFKYLLRQMHE 178
Score = 129 (50.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 3 DPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETSDVLIKLIKPYTRIHIP 62
+PF + N + KL++ Y I + R L D+L + R ++
Sbjct: 294 NPFDSPETQPYKDNPHIIAMTKLVEAYQIRDITAVERILQTYQHDILDD---DFIRQYVD 350
Query: 63 FISRQLNIETSDVLIKLIKPYTRIHIPFISRQLNIETSDVESLLVSLILDNTVRGRIDQS 122
I + S VLI+L+KPYT + + ++++L + S +E LV LI+D V G+ID
Sbjct: 351 KILYSIR---SQVLIELVKPYTSVKLSLLAKKLGVSISIIEQALVGLIIDERVNGKIDMV 407
Query: 123 NYKEMMSRYKQLL 135
N +S+ K +
Sbjct: 408 NEVFTISQPKNTI 420
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 19/46 (41%), Positives = 36/46 (78%)
Query: 1 MDDPFIREHIEDLLRNIRTQVLIKLIKPYTRIHIPFISRQLNIETS 46
+DD FIR++++ +L +IR+QVLI+L+KPYT + + ++++L + S
Sbjct: 340 LDDDFIRQYVDKILYSIRSQVLIELVKPYTSVKLSLLAKKLGVSIS 385
>CGD|CAL0004448 [details] [associations]
symbol:orf19.1400 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 120 DQSNYKEMMSRYKQLLLYIKS----AVTRNYSEKSINSILDYISTSKNMELLQDFYETTL 175
DQ N++ + QL+ I ++Y E+S + +++ S S N+ + FY T L
Sbjct: 118 DQQNFQLFLETLTQLIQLIPKFNHDGHYKSYIEESFSKMINRYSISANVTFVTQFYNTLL 177
Query: 176 EALKDAKND--RLWFKTNTKLGKLYFDREDFNKLSRILKQLH 215
L N RLWFK N L L+ D + ++ + +L++++
Sbjct: 178 NYLDSNSNSSCRLWFKININLLNLHLDHQIYDDIPNLLQKVY 219
>UNIPROTKB|Q59YC7 [details] [associations]
symbol:CSN2 "Potential COP9 signalosome subunit CSN2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 120 DQSNYKEMMSRYKQLLLYIKS----AVTRNYSEKSINSILDYISTSKNMELLQDFYETTL 175
DQ N++ + QL+ I ++Y E+S + +++ S S N+ + FY T L
Sbjct: 118 DQQNFQLFLETLTQLIQLIPKFNHDGHYKSYIEESFSKMINRYSISANVTFVTQFYNTLL 177
Query: 176 EALKDAKND--RLWFKTNTKLGKLYFDREDFNKLSRILKQLH 215
L N RLWFK N L L+ D + ++ + +L++++
Sbjct: 178 NYLDSNSNSSCRLWFKININLLNLHLDHQIYDDIPNLLQKVY 219
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 222 0.00096 112 3 11 22 0.48 32
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 554 (59 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.36u 0.10s 24.46t Elapsed: 00:00:22
Total cpu time: 24.37u 0.10s 24.47t Elapsed: 00:00:22
Start: Thu Aug 15 12:22:03 2013 End: Thu Aug 15 12:22:25 2013