Query psy3487
Match_columns 538
No_of_seqs 390 out of 2423
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 17:58:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3487.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3487hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2209|consensus 100.0 6.8E-55 1.5E-59 420.7 3.4 328 88-444 74-436 (445)
2 KOG1737|consensus 100.0 9.9E-54 2.2E-58 466.1 12.3 246 112-387 488-741 (799)
3 PF01237 Oxysterol_BP: Oxyster 100.0 8.7E-50 1.9E-54 415.9 2.3 267 89-387 33-306 (354)
4 KOG2209|consensus 100.0 2.2E-36 4.7E-41 292.5 -1.4 142 284-427 40-196 (445)
5 KOG2210|consensus 100.0 2.2E-33 4.7E-38 286.7 12.3 208 83-291 56-280 (392)
6 KOG1737|consensus 100.0 5.2E-34 1.1E-38 311.8 3.5 195 273-472 417-636 (799)
7 PF01237 Oxysterol_BP: Oxyster 100.0 1.6E-31 3.4E-36 278.8 2.0 164 287-452 1-203 (354)
8 KOG3710|consensus 99.9 1.3E-27 2.8E-32 222.4 -0.3 92 425-525 66-157 (280)
9 cd01247 PH_GPBP Goodpasture an 99.9 3E-21 6.6E-26 161.7 11.6 87 18-104 1-90 (91)
10 KOG2210|consensus 99.8 2.1E-20 4.5E-25 191.6 7.5 156 287-444 36-213 (392)
11 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 2.9E-19 6.3E-24 151.1 10.5 87 18-106 1-94 (95)
12 cd01233 Unc104 Unc-104 pleckst 99.8 7.1E-19 1.5E-23 150.2 12.3 88 16-105 2-97 (100)
13 cd01251 PH_centaurin_alpha Cen 99.8 7E-19 1.5E-23 151.0 10.9 88 18-107 1-101 (103)
14 cd01238 PH_Tec Tec pleckstrin 99.8 5.2E-18 1.1E-22 146.4 10.7 88 17-104 1-105 (106)
15 cd01264 PH_melted Melted pleck 99.7 8.7E-18 1.9E-22 142.1 10.4 87 18-105 2-100 (101)
16 cd01260 PH_CNK Connector enhan 99.7 1.4E-17 3.1E-22 141.1 11.4 87 17-105 1-96 (96)
17 cd01235 PH_SETbf Set binding f 99.7 4.1E-17 8.8E-22 139.4 11.4 86 18-105 1-100 (101)
18 PF15409 PH_8: Pleckstrin homo 99.7 6.3E-17 1.4E-21 133.0 10.5 85 20-106 1-89 (89)
19 cd01252 PH_cytohesin Cytohesin 99.7 1.3E-16 2.8E-21 142.0 12.6 91 17-109 1-116 (125)
20 cd01246 PH_oxysterol_bp Oxyste 99.7 5.1E-16 1.1E-20 129.6 11.9 88 18-105 1-91 (91)
21 cd01257 PH_IRS Insulin recepto 99.7 7.6E-16 1.6E-20 131.0 11.8 86 15-104 1-100 (101)
22 cd01245 PH_RasGAP_CG5898 RAS G 99.6 5.5E-16 1.2E-20 130.7 8.2 83 19-104 2-97 (98)
23 cd01266 PH_Gab Gab (Grb2-assoc 99.6 1.2E-15 2.5E-20 132.3 10.2 85 18-104 1-106 (108)
24 cd01236 PH_outspread Outspread 99.6 1.2E-15 2.7E-20 130.2 10.1 85 18-104 1-102 (104)
25 cd01250 PH_centaurin Centaurin 99.6 2.2E-15 4.8E-20 126.5 11.2 88 18-105 1-94 (94)
26 cd01241 PH_Akt Akt pleckstrin 99.6 2.5E-14 5.5E-19 122.5 11.0 86 16-105 1-101 (102)
27 KOG0930|consensus 99.5 1.5E-14 3.3E-19 139.0 8.7 91 15-107 259-376 (395)
28 PF00169 PH: PH domain; Inter 99.5 1.6E-13 3.5E-18 116.0 13.0 91 16-106 1-103 (104)
29 cd01237 Unc112 Unc-112 pleckst 99.5 2.9E-14 6.3E-19 120.4 7.6 79 28-106 16-103 (106)
30 cd01244 PH_RasGAP_CG9209 RAS_G 99.5 2.1E-13 4.5E-18 115.4 10.7 74 28-104 17-97 (98)
31 PF15413 PH_11: Pleckstrin hom 99.5 3.2E-13 6.9E-18 117.7 11.4 88 18-105 1-112 (112)
32 cd01263 PH_anillin Anillin Ple 99.4 5.9E-13 1.3E-17 116.8 10.2 89 17-105 2-122 (122)
33 cd01219 PH_FGD FGD (faciogenit 99.4 2.7E-12 5.9E-17 109.8 12.3 92 16-107 2-100 (101)
34 cd01254 PH_PLD Phospholipase D 99.3 9.4E-12 2E-16 109.9 10.4 86 18-105 1-121 (121)
35 cd01253 PH_beta_spectrin Beta- 99.3 2.6E-11 5.7E-16 104.2 10.0 88 18-105 1-104 (104)
36 smart00233 PH Pleckstrin homol 99.2 1.3E-10 2.7E-15 96.8 12.4 90 17-106 2-101 (102)
37 cd01220 PH_CDEP Chondrocyte-de 99.2 1.2E-10 2.6E-15 98.9 12.0 91 16-107 2-98 (99)
38 cd00821 PH Pleckstrin homology 99.0 9.3E-10 2E-14 90.5 9.0 88 18-105 1-96 (96)
39 cd01256 PH_dynamin Dynamin ple 99.0 1.6E-09 3.5E-14 89.1 9.9 88 16-105 1-104 (110)
40 cd00900 PH-like Pleckstrin hom 99.0 5.9E-09 1.3E-13 86.3 11.0 86 18-105 1-99 (99)
41 cd01230 PH_EFA6 EFA6 Pleckstri 99.0 4.6E-09 1E-13 91.8 10.5 90 18-107 2-112 (117)
42 KOG1739|consensus 98.9 1.5E-09 3.3E-14 111.8 5.3 95 13-107 21-117 (611)
43 KOG0690|consensus 98.8 5.1E-09 1.1E-13 104.2 5.5 98 12-109 11-119 (516)
44 KOG1090|consensus 98.8 1.7E-09 3.8E-14 118.8 1.7 89 16-106 1634-1731(1732)
45 cd01234 PH_CADPS CADPS (Ca2+-d 98.8 8.4E-09 1.8E-13 85.6 4.6 86 17-105 3-109 (117)
46 PF14593 PH_3: PH domain; PDB: 98.7 2.1E-07 4.5E-12 79.4 11.8 90 13-108 10-101 (104)
47 PF15410 PH_9: Pleckstrin homo 98.7 1.4E-07 3E-12 83.2 10.4 88 18-105 2-117 (119)
48 cd01243 PH_MRCK MRCK (myotonic 98.6 4.8E-07 1E-11 77.9 10.1 89 17-105 3-118 (122)
49 cd01242 PH_ROK Rok (Rho- assoc 98.5 1.2E-06 2.7E-11 74.3 11.2 89 18-106 2-110 (112)
50 cd01218 PH_phafin2 Phafin2 Pl 98.5 1.5E-06 3.2E-11 74.4 11.5 93 16-110 4-102 (104)
51 cd01239 PH_PKD Protein kinase 98.5 1E-06 2.2E-11 75.3 10.0 87 17-105 1-117 (117)
52 cd01259 PH_Apbb1ip Apbb1ip (Am 98.3 1.3E-06 2.8E-11 74.3 5.7 88 17-106 1-108 (114)
53 cd01261 PH_SOS Son of Sevenles 98.2 2.4E-05 5.2E-10 67.8 11.0 92 16-107 4-110 (112)
54 cd01249 PH_oligophrenin Oligop 98.0 3.1E-05 6.7E-10 65.7 9.0 86 18-103 1-102 (104)
55 KOG2059|consensus 97.9 1.5E-05 3.2E-10 86.5 6.9 99 7-108 555-666 (800)
56 cd01240 PH_beta-ARK Beta adren 97.9 1.1E-05 2.4E-10 67.9 4.1 94 15-111 2-103 (116)
57 KOG0248|consensus 97.9 4.3E-06 9.4E-11 89.9 1.9 95 13-107 246-342 (936)
58 cd01262 PH_PDK1 3-Phosphoinosi 97.8 0.00011 2.3E-09 60.4 8.8 84 17-106 2-88 (89)
59 KOG0521|consensus 97.8 7.6E-06 1.7E-10 92.9 1.8 96 14-111 272-373 (785)
60 KOG3640|consensus 97.8 3.3E-05 7.1E-10 86.1 6.0 94 14-107 988-1107(1116)
61 cd01258 PH_syntrophin Syntroph 97.5 0.00031 6.7E-09 60.2 7.3 85 20-104 3-107 (108)
62 PLN00188 enhanced disease resi 97.5 0.00046 9.9E-09 76.4 10.0 95 15-109 3-112 (719)
63 KOG3531|consensus 97.5 1.8E-05 3.9E-10 87.0 -0.9 93 17-111 925-1024(1036)
64 KOG1117|consensus 97.5 0.0001 2.2E-09 81.4 4.6 161 3-166 71-245 (1186)
65 cd01224 PH_Collybistin Collybi 97.3 0.0049 1.1E-07 52.9 12.0 90 17-106 3-107 (109)
66 KOG3723|consensus 97.3 7.5E-05 1.6E-09 79.2 1.1 94 12-108 731-838 (851)
67 PF12814 Mcp5_PH: Meiotic cell 97.2 0.0039 8.4E-08 55.2 11.0 88 18-105 11-120 (123)
68 PF15406 PH_6: Pleckstrin homo 97.2 0.00068 1.5E-08 57.4 5.7 61 41-103 49-110 (112)
69 KOG3751|consensus 97.2 0.00048 1E-08 72.8 5.8 93 12-106 313-424 (622)
70 PLN02866 phospholipase D 97.2 0.0025 5.3E-08 73.5 11.9 92 13-106 179-307 (1068)
71 PTZ00267 NIMA-related protein 97.2 0.001 2.2E-08 72.7 8.5 91 14-105 375-475 (478)
72 cd01222 PH_clg Clg (common-sit 97.2 0.007 1.5E-07 51.2 11.3 86 15-105 3-94 (97)
73 cd01225 PH_Cool_Pix Cool (clon 96.3 0.027 5.8E-07 48.3 8.7 78 28-105 24-108 (111)
74 cd01221 PH_ephexin Ephexin Ple 96.3 0.035 7.6E-07 49.0 9.6 72 32-103 27-119 (125)
75 cd01226 PH_exo84 Exocyst compl 96.3 0.044 9.6E-07 46.4 9.7 70 36-106 24-98 (100)
76 KOG3543|consensus 95.9 0.0014 3E-08 70.4 -1.2 90 13-105 461-564 (1218)
77 PF15404 PH_4: Pleckstrin homo 95.9 0.067 1.4E-06 50.5 10.0 51 18-68 1-60 (185)
78 KOG4424|consensus 95.5 0.021 4.6E-07 61.5 5.5 105 7-111 263-374 (623)
79 PTZ00283 serine/threonine prot 95.2 0.061 1.3E-06 59.1 8.4 92 14-106 371-489 (496)
80 KOG0932|consensus 95.1 0.0093 2E-07 63.7 1.3 92 14-105 504-616 (774)
81 cd01232 PH_TRIO Trio pleckstri 94.9 0.48 1E-05 41.3 11.5 92 14-106 3-112 (114)
82 KOG0705|consensus 94.7 0.011 2.4E-07 63.4 0.6 40 12-51 298-340 (749)
83 KOG1117|consensus 94.6 0.062 1.3E-06 60.3 6.1 93 12-108 188-281 (1186)
84 KOG1451|consensus 94.3 0.081 1.8E-06 57.1 6.2 94 12-105 261-366 (812)
85 cd01228 PH_BCR-related BCR (br 94.1 0.3 6.6E-06 40.7 7.7 85 16-105 3-93 (96)
86 KOG3727|consensus 94.0 0.0049 1.1E-07 65.8 -3.6 94 14-107 354-459 (664)
87 cd01223 PH_Vav Vav pleckstrin 93.0 0.71 1.5E-05 40.2 8.6 94 14-107 2-112 (116)
88 cd01231 PH_Lnk LNK-family Plec 92.3 0.65 1.4E-05 39.1 7.1 77 28-104 17-106 (107)
89 cd01248 PH_PLC Phospholipase C 92.3 1.3 2.9E-05 38.4 9.6 77 21-103 11-113 (115)
90 cd01227 PH_Dbs Dbs (DBL's big 92.0 2.1 4.7E-05 38.3 10.7 75 33-107 30-116 (133)
91 KOG0248|consensus 90.7 0.074 1.6E-06 58.3 0.0 87 16-105 259-347 (936)
92 KOG4807|consensus 90.7 0.0048 1E-07 63.1 -8.4 82 27-108 30-116 (593)
93 PF15408 PH_7: Pleckstrin homo 88.7 0.26 5.6E-06 40.1 1.6 85 19-108 1-99 (104)
94 KOG3551|consensus 88.4 0.66 1.4E-05 48.0 4.8 130 15-160 291-440 (506)
95 KOG1738|consensus 87.7 0.11 2.4E-06 56.8 -1.3 52 16-69 562-616 (638)
96 KOG4424|consensus 81.8 0.91 2E-05 49.4 2.3 78 28-107 509-596 (623)
97 KOG4236|consensus 76.4 3.5 7.5E-05 44.9 4.6 94 13-108 410-525 (888)
98 KOG3549|consensus 73.2 9.6 0.00021 39.2 6.5 88 13-106 278-386 (505)
99 PF15277 Sec3-PIP2_bind: Exocy 69.6 46 0.00099 27.7 8.9 74 31-105 2-87 (91)
100 KOG2070|consensus 65.4 6.7 0.00014 42.1 3.7 73 32-104 325-404 (661)
101 KOG0772|consensus 61.0 2.2E+02 0.0047 31.4 13.8 37 340-376 386-425 (641)
102 KOG1170|consensus 55.8 0.45 9.8E-06 53.4 -7.0 88 17-107 3-95 (1099)
103 cd01255 PH_TIAM TIAM Pleckstri 55.7 61 0.0013 29.3 7.4 73 35-107 52-155 (160)
104 PF15405 PH_5: Pleckstrin homo 54.0 89 0.0019 28.0 8.5 89 17-105 2-134 (135)
105 PF08458 PH_2: Plant pleckstri 53.7 23 0.00051 30.5 4.4 32 73-104 70-101 (110)
106 KOG3523|consensus 47.0 28 0.00061 38.5 4.8 70 34-103 501-591 (695)
107 KOG0592|consensus 38.9 22 0.00049 39.0 2.6 84 16-105 451-536 (604)
108 PF04714 BCL_N: BCL7, N-termin 29.1 38 0.00083 24.8 1.6 21 28-48 26-46 (52)
109 KOG1264|consensus 27.9 71 0.0015 36.8 4.2 48 3-50 462-509 (1267)
110 KOG3520|consensus 27.6 78 0.0017 38.1 4.7 53 59-111 668-726 (1167)
111 COG0436 Aspartate/tyrosine/aro 26.9 34 0.00073 36.5 1.5 20 506-525 159-178 (393)
112 KOG3551|consensus 26.8 65 0.0014 33.9 3.4 50 58-107 215-272 (506)
113 COG2154 Pterin-4a-carbinolamin 26.6 28 0.00061 29.6 0.7 17 153-169 50-66 (101)
114 PF15411 PH_10: Pleckstrin hom 26.1 4.4E+02 0.0095 22.9 10.5 73 30-102 19-116 (116)
115 KOG4095|consensus 20.2 43 0.00094 30.3 0.6 21 28-48 27-47 (165)
No 1
>KOG2209|consensus
Probab=100.00 E-value=6.8e-55 Score=420.70 Aligned_cols=328 Identities=32% Similarity=0.487 Sum_probs=258.9
Q ss_pred EeccHHHHHHHHHHhHhhhhhhcccceeeceeeccccccccccCCCCCCCcccceeeeecCCCCeEEeeccccCCCceeE
Q psy3487 88 KASNEVERQRWVTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAA 167 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~a~~~~~Rm~~v~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~~~g~~~~~EQVSHHPPisa 167 (538)
+...--|....+.......++.+||++|+||++|..++...++.|||||||||||++.+ .|.|++|++|||||||||||
T Consensus 74 RltEyme~~yLi~kAs~~~~p~eRmqyVAAFAvsavas~weR~gKPFNPLl~et~el~r-~dlg~R~i~EQVSHHPPiSA 152 (445)
T KOG2209|consen 74 RLTEYMEHTYLIHKASSQSDPVERMQYVAAFAVSAVASQWERTGKPFNPLLGETYELER-EDLGFRFISEQVSHHPPISA 152 (445)
T ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhHHHhcCCCcchhhhhhhhee-cccceEEeehhhccCCChhH
Confidence 33334444455555566678899999999999999999889999999999999999987 45799999999999999999
Q ss_pred EEEE--cCCEEEEEEEeeeEEEeeeEEEEEeceeEEEEEcCCCeEEEEEeeceEEEeeEecceEEeecceEEEEECCCCC
Q psy3487 168 QYVE--GKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGS 245 (538)
Q Consensus 168 ~~~e--~~g~~~~g~~~~~~kF~g~sv~i~~~G~~~i~f~~~~e~y~~~~p~~~v~~li~G~~~~e~~G~~~i~~~~tg~ 245 (538)
||+| +..|.+.|++.++-+|||++|+..|.|.+.++|.+.+|.|+|+.|+.+|+|||+|++|++++|.|+|+++.||+
T Consensus 153 fhaEgl~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~ 232 (445)
T KOG2209|consen 153 FHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGH 232 (445)
T ss_pred hhhcccCcceEEeeeecccceeccceeecCCCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccc
Confidence 9999 56899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeeeeeccCCceeeeeccC--CCCCeeeeeCCCCCCCcceee------eeecc----------CCCCCC--CCCC
Q psy3487 246 TCRLTFYPYSYFSRQTQRRVLPWK--PNTPRRSIIPEKPPGSMQIWS------ILKNS----------IGKDLS--TIPM 305 (538)
Q Consensus 246 ~~~l~f~~~~~fs~~~~~~v~G~v--~g~~~~~~l~G~W~~~i~lw~------i~k~~----------iGkdls--~i~~ 305 (538)
+|++.|.|.|+|+++ .++|+|.| .++...+.|.|+|..-+..-+ ..|+. +-+.-| .-.+
T Consensus 233 ~~vl~Fk~~G~~gk~-lHkVEG~i~d~~k~kl~~lYGkWTe~l~~cd~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~ 311 (445)
T KOG2209|consen 233 KCVLNFKPCGLFGKE-LHKVEGHIQDKSKKKLCALYGKWTECLYSCDPESFDAFKKQDKRNTEERKNSKQMSTSEELDDM 311 (445)
T ss_pred eeEEecccccccccc-hhheeehhhccccccchhhhccHHHHHhcCCHHHHHHHHHhhhhcchhhhhhccCCchhhccCC
Confidence 999999999999887 47899999 466666999999997653221 11211 111111 1125
Q ss_pred CCCCC------CCcccchhccccccchhHHHhhhcCCCCCCccceEEEeeeeeccccccCC----CCCCCCcCCCCCeEE
Q psy3487 306 PLNFS------EPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEG----VAPTDSRLRPDQRLL 375 (538)
Q Consensus 306 Pv~~~------ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~~~fa~~l~e~~~~----~~ptd~r~r~d~r~~ 375 (538)
||... --..+||+ .++.|+ +...||.||.|+++|||+.+. ++|||+|+|||.|.+
T Consensus 312 P~~ds~~v~~iPgSk~LW~------------~n~rP~---n~~~~y~FT~FalsLNem~~~M~~tl~pTD~RlRpDi~~m 376 (445)
T KOG2209|consen 312 PVPDSESVFIIPGSKLLWR------------INPRPP---NSAQMYNFTSFALSLNEMDKGMESTLPPTDCRLRPDIRAM 376 (445)
T ss_pred CCCCcceeEecCCCeEEEE------------ecCCCC---CHHHhhchhhheeehhhhccCcccccCCcccccCchhhhh
Confidence 64332 23568999 788888 678999999999999998754 899999999999999
Q ss_pred eeeeccccccee--eecCCeeEeEeeeeecccccceEEEEecceE-EEEeecccceEeeeeeccEEeEEEcc
Q psy3487 376 EVSHHPPIAAQY--VEGKAWKAWQDLAVHSKFRGKYIQVTPAGRF-NLVFTKSSMAVLHEVLGMYHSGVFKD 444 (538)
Q Consensus 376 e~~hhpp~~a~~--~e~~~~~~~~~~~~~~kF~G~s~~~~~~G~~-~~~~~~~g~~V~nEv~gl~~~g~f~~ 444 (538)
|+|..+.|+.++ .|.+ |.-+-+.| .+ ..+.+ .-||..........--.+|.+|.|..
T Consensus 377 E~G~~D~AseeK~rlEEk-----QRe~Rk~r--s~-----~~~dw~~rWF~~~~np~t~~~dWlYsGgYwdR 436 (445)
T KOG2209|consen 377 ENGNIDQASEEKKRLEEK-----QREARKNR--SK-----SEEDWKTRWFHQGPNPYTGAQDWLYSGGYWDR 436 (445)
T ss_pred hcCCcchhHHHHHHHHHH-----HHHHHhhc--cc-----ccccCcchhcccCCCCCCCcccceeecCcccc
Confidence 999999998874 3433 11111111 11 12222 35666666655555556777776643
No 2
>KOG1737|consensus
Probab=100.00 E-value=9.9e-54 Score=466.09 Aligned_cols=246 Identities=44% Similarity=0.714 Sum_probs=224.0
Q ss_pred cceeeceeeccccccccccCCCCCCCcccceeeeecCCCCeEEeeccccCCCceeEEEEEcCCEEEEEEEeeeEEEeeeE
Q psy3487 112 HALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKY 191 (538)
Q Consensus 112 m~~v~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~~~g~~~~~EQVSHHPPisa~~~e~~g~~~~g~~~~~~kF~g~s 191 (538)
|.+|++|++|+|+.+..+..|||||+||||||+.+. |+|++||+|||||||||+|+|+|+++|.+||+..+++||+|+|
T Consensus 488 ~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~-dkg~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gks 566 (799)
T KOG1737|consen 488 MVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRP-DKGLRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKS 566 (799)
T ss_pred HHHHHHHHhhhcchhcccccCCCCcccccceEeecc-CCceeeeeeeeccCCCcccccccCCCceeeccccccccccccc
Confidence 567899999999888899999999999999999984 5599999999999999999999999999999999999999999
Q ss_pred EEEEeceeEEEEEcCCCeEEEEEeeceEEEeeEecceEEeecceEEEEECCCC-CeEEEEEeeeeeccCCceeeeeccC-
Q psy3487 192 IQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTG-STCRLTFYPYSYFSRQTQRRVLPWK- 269 (538)
Q Consensus 192 v~i~~~G~~~i~f~~~~e~y~~~~p~~~v~~li~G~~~~e~~G~~~i~~~~tg-~~~~l~f~~~~~fs~~~~~~v~G~v- 269 (538)
|.|.|.|..+|+|++.|++|+|.+|+.+|+|||.|++|+|++|+|.|++++++ .+|.|+|.+.+||++. .++|.|.|
T Consensus 567 i~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge~~i~n~~~~~~~c~L~F~~~~~~~~~-~~ev~g~V~ 645 (799)
T KOG1737|consen 567 IEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGEMEITNHTTGSDKCKLKFVKAGYFSRN-AREVEGSVR 645 (799)
T ss_pred eeecCCceEEEEEcCCCccccccCccceecceeeccccccccccEEEecCCCCcceeEEEEeeecccCCC-cceeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999 7999999999999988 68999999
Q ss_pred --CCCCeeeeeCCCCCCCcceeeeeeccCCCCCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCCCCCCccceEEE
Q psy3487 270 --PNTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCF 347 (538)
Q Consensus 270 --~g~~~~~~l~G~W~~~i~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~ 347 (538)
+|++. .++.|+|+++|+...+.+.+ .| ......++||+ .+..|+ + .+|+|
T Consensus 646 ~~s~~~~-~~l~GkW~e~~~~~~~~~~~---------~~-~~~~~~~~iWk------------~~~~Pk---n--~~y~f 697 (799)
T KOG1737|consen 646 NKSGKKV-EVLTGKWDESLYYFKVDKVG---------LP-EPETSEKLIWK------------ANDLPK---N--NKYNF 697 (799)
T ss_pred CCCCcee-EEEeeeehhhhhhccccccc---------cc-cCCccceeeee------------cCCCCC---C--ccccc
Confidence 78888 99999999999987765433 11 12234689999 777777 3 78999
Q ss_pred eeeeeccccc----cCCCCCCCCcCCCCCeEEeeeeccccccee
Q psy3487 348 TKFACQLNEL----EEGVAPTDSRLRPDQRLLEVSHHPPIAAQY 387 (538)
Q Consensus 348 ~~fa~~l~e~----~~~~~ptd~r~r~d~r~~e~~hhpp~~a~~ 387 (538)
+.||++||++ .+.++|||+|+|||||++|+|..+.|.+++
T Consensus 698 t~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK 741 (799)
T KOG1737|consen 698 TGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEK 741 (799)
T ss_pred chhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhh
Confidence 9999999998 556899999999999999999999998875
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=8.7e-50 Score=415.94 Aligned_cols=267 Identities=32% Similarity=0.518 Sum_probs=198.1
Q ss_pred eccHHHHHHHHHHhHhhhhhhcccceeeceeeccccccccccCCCCCCCcccceeeeecCCCCeEEeeccccCCCceeEE
Q psy3487 89 ASNEVERQRWVTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQ 168 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a~~~~~Rm~~v~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~~~g~~~~~EQVSHHPPisa~ 168 (538)
..+..+....+..+....++.+||++|++|++|+|+....+++|||||+||||||+.+. +|++++||||||||||+||
T Consensus 33 ~~~~~~y~~lL~~Aa~~~d~~eR~~~V~~f~~S~~~~~~~~~~KPfNPiLGETfe~~~~--~~~~~~aEQVSHHPPisa~ 110 (354)
T PF01237_consen 33 LAEDFEYPDLLDKAAEEDDPLERMLYVAAFALSSYSSTPGRTKKPFNPILGETFELVRP--DGTRFIAEQVSHHPPISAF 110 (354)
T ss_dssp GGGGSSSHHHHHGGGGS-HHHHHHHHHHHHHHHHHHHHHHHHHEEE---TT-EE--TT---T-EEEEEEEEETTTTEEEE
T ss_pred hhhhhhChHHHhccCCCCCHHHHHHHHHHHHHhhhhhhcCCCCcCcCCCCcceeeeccC--ceEEEEEecccCCCCceEE
Confidence 34455556667777777889999999999999999988777889999999999998863 5999999999999999999
Q ss_pred EEEcCCEEEEEEEeeeEEEeeeEEEEEeceeEEEEEcCCCeEEEEEeeceEEEeeEecceEEeecceEEEEECCCCCeEE
Q psy3487 169 YVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCR 248 (538)
Q Consensus 169 ~~e~~g~~~~g~~~~~~kF~g~sv~i~~~G~~~i~f~~~~e~y~~~~p~~~v~~li~G~~~~e~~G~~~i~~~~tg~~~~ 248 (538)
|+++++|+++|++.++++|+|+||++.+.|..+|+|.+.+|+|+|++|++.++||++|++|+|+.|.+.|+|+++|++|.
T Consensus 111 ~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~ 190 (354)
T PF01237_consen 111 HAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWTKPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAE 190 (354)
T ss_dssp EEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE--SEEEESTTTTS-EEEEESEEEEEET-TS-EEE
T ss_pred EEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEecCcEEEeeeecccEEEEecCCEEEEcCCcceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeeeccCCceeeeeccC---CCCCeeeeeCCCCCCCcceeeeeeccCCCCCCCCCCCCCCCCCcccchhccccccc
Q psy3487 249 LTFYPYSYFSRQTQRRVLPWK---PNTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEY 325 (538)
Q Consensus 249 l~f~~~~~fs~~~~~~v~G~v---~g~~~~~~l~G~W~~~i~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey 325 (538)
|+|.++|+|+++. +.|+|.| +|+++ ++|.|+|++.+.+...-... .......||.
T Consensus 191 i~f~~~~~f~~~~-~~v~G~I~~~~~~~~-~~i~G~W~~~i~~~~~~~~~-------------~~~~~~~lw~------- 248 (354)
T PF01237_consen 191 IEFKPKGWFSGKS-NEVEGKIYDSKGKPI-YKISGKWDEEIYIKDVKNDS-------------DTGESKLLWD------- 248 (354)
T ss_dssp EEEETSSSTSSST-TEEEEEEESSGGG-S-EEEEEETTSEEEEEETT-----------------GGGEEEEEE-------
T ss_pred EEEecCCcccccc-eeeEEEEEEccCcee-EEeeeeeCCeEEEEeccccc-------------cCCCceEEEE-------
Confidence 9999999999875 8999999 45555 99999999999887652110 0112356777
Q ss_pred hhHHHhhhcCCCCCCccceEEEeeeeeccccccCC----CCCCCCcCCCCCeEEeeeeccccccee
Q psy3487 326 AHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEG----VAPTDSRLRPDQRLLEVSHHPPIAAQY 387 (538)
Q Consensus 326 ~~ll~~a~~~~d~~~~~r~~~~~~fa~~l~e~~~~----~~ptd~r~r~d~r~~e~~hhpp~~a~~ 387 (538)
....+. ..++++.++.||+.|||+.+. ++|||+|+|||++++|.|+.+.|.+.+
T Consensus 249 -----~~~~~~---~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK 306 (354)
T PF01237_consen 249 -----ANPLPP---NPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEK 306 (354)
T ss_dssp -----TTTS-S---S--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHH
T ss_pred -----CCCCcc---cccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHH
Confidence 555555 356788999999999987643 689999999999999999999998864
No 4
>KOG2209|consensus
Probab=100.00 E-value=2.2e-36 Score=292.53 Aligned_cols=142 Identities=35% Similarity=0.542 Sum_probs=128.9
Q ss_pred CCcceeeeeeccCCCCCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCCCCCCccceEEEeeeeec--------cc
Q psy3487 284 GSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQ--------LN 355 (538)
Q Consensus 284 ~~i~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~~~fa~~--------l~ 355 (538)
..++||+|+|.|||||||+|+|||.+|||+|+|||++|.|||..||.+|+.++| +.|||-+|+|||++ ++
T Consensus 40 ~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~~~--p~eRmqyVAAFAvsavas~weR~g 117 (445)
T KOG2209|consen 40 NDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQSD--PVERMQYVAAFAVSAVASQWERTG 117 (445)
T ss_pred ccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhCCC--hHHHHHHHHHHHHHHHHHhHHHhc
Confidence 357899999999999999999999999999999999999999999999999999 89999999999997 23
Q ss_pred c-ccCCCCCCCCcCCCC--CeEEe--eeecccccceeee--cCCeeEeEeeeeecccccceEEEEecceEEEEeecccc
Q psy3487 356 E-LEEGVAPTDSRLRPD--QRLLE--VSHHPPIAAQYVE--GKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSSM 427 (538)
Q Consensus 356 e-~~~~~~ptd~r~r~d--~r~~e--~~hhpp~~a~~~e--~~~~~~~~~~~~~~kF~G~s~~~~~~G~~~~~~~~~g~ 427 (538)
. .++.+++|++.-|.| +|++. |||||||||+||| +..+.|.|.+.|+-||||+|+++.|.|++.|+|.++++
T Consensus 118 KPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nE 196 (445)
T KOG2209|consen 118 KPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNE 196 (445)
T ss_pred CCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecCCCceEEEEecccCc
Confidence 2 234477899888887 68874 8999999999999 78999999999999999999999999999999997433
No 5
>KOG2210|consensus
Probab=100.00 E-value=2.2e-33 Score=286.68 Aligned_cols=208 Identities=22% Similarity=0.295 Sum_probs=177.1
Q ss_pred eEEEEEeccHHHHH-HH------HHHhHhhhhhhcccceeeceeeccccccccccCCCCCCCcccceeeeecC----C-C
Q psy3487 83 QTFHIKASNEVERQ-RW------VTALELAKSKARQHALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTA----D-A 150 (538)
Q Consensus 83 ~~~~L~A~s~~e~~-~W------i~al~~a~~~~~Rm~~v~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~----~-~ 150 (538)
.+|.|...+..|+- .| +..+....++.+||..|++|++|+++..+...+||+||+|||||.|.|.- + .
T Consensus 56 Ptfile~rs~Le~~~~~~~~~dll~~~~~~~~p~~R~~~VvkwylS~~~~~~~~~~~PyNPILGEtF~~~w~~~~~p~~~ 135 (392)
T KOG2210|consen 56 PTFILEPRSLLEKYTDFSYHPDLLLEASSEADPLERMLAVVKWYLSGFHAGPKGRKKPYNPILGETFTCHWKYPPHPSKG 135 (392)
T ss_pred hhhhhhhHHHHHHhhhhhhccchhcccccCCCHHHHhhhheeeeehhcccccccccCCCCccchhhcccccccCCCCCCc
Confidence 45666655555543 22 33445556778999999999999999998888889999999999998842 1 3
Q ss_pred CeEEeeccccCCCceeEEEEEcC--CEEEEEEEeeeEEEeeeEEEEEeceeEEEEEcCCCeEEEEEeeceEEEeeEecce
Q psy3487 151 GWKAFSEQVSHHPPIAAQYVEGK--AWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNL 228 (538)
Q Consensus 151 g~~~~~EQVSHHPPisa~~~e~~--g~~~~g~~~~~~kF~g~sv~i~~~G~~~i~f~~~~e~y~~~~p~~~v~~li~G~~ 228 (538)
...|+||||||||||||||++++ |+++.|++.++++|.|+|+.+...|...++|.+.+|+|.++.|...++|+++|.+
T Consensus 136 ~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l~ll~~~E~Y~~t~P~~~~rg~~~~~p 215 (392)
T KOG2210|consen 136 DTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVLKLLDHDETYLITFPNAYARGILLGAP 215 (392)
T ss_pred eEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEEEEEecCcceeeccCCceeeeeeeccc
Confidence 47899999999999999999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecceEEEEECCCCCeEEEEEeeeeeccCCce---eeeeccCCCCCeeeeeCCCCCCCcceeee
Q psy3487 229 WVDQHGESDVINVTTGSTCRLTFYPYSYFSRQTQ---RRVLPWKPNTPRRSIIPEKPPGSMQIWSI 291 (538)
Q Consensus 229 ~~e~~G~~~i~~~~tg~~~~l~f~~~~~fs~~~~---~~v~G~v~g~~~~~~l~G~W~~~i~lw~i 291 (538)
|+++.|.+.|.|+++++.+.+.|..++|+++... ..+.+.+..+.. .+|+|.||+.|.+...
T Consensus 216 ~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~-~~i~G~W~~~~~~k~~ 280 (392)
T KOG2210|consen 216 WVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDF-CSISGEWDGVMYAKYA 280 (392)
T ss_pred eEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEcccccccc-cccceeecccEEEEEc
Confidence 9999999999999999999999999999887642 233333345555 7899999999988665
No 6
>KOG1737|consensus
Probab=99.98 E-value=5.2e-34 Score=311.85 Aligned_cols=195 Identities=37% Similarity=0.643 Sum_probs=164.9
Q ss_pred CeeeeeCC--CCCCCcceeeeeeccCCCCCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCCCCCCccceEEEeee
Q psy3487 273 PRRSIIPE--KPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKF 350 (538)
Q Consensus 273 ~~~~~l~G--~W~~~i~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~~~f 350 (538)
.++..|.+ +-..++++|+++|++||||||+|+|||.||||+|+|||++|+|||++|||+|+..+| +.+||++|++|
T Consensus 417 ~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv~~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~~d--~~~R~~~vaaf 494 (799)
T KOG1737|consen 417 ARRTNLPAPSKPSSSISLWSILRNNIGKDLSKVSMPVEFNEPLSLLQRVAEDLEYSELLDKAANYED--PLERMVYVAAF 494 (799)
T ss_pred cccccCCCCcCcCCCccHHHHHhhcccccccccccceecCCcchHHHHhhhhccchhhhHHHHhcCC--cHHHHHHHHHH
Confidence 34478888 455689999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeccc---------cccCCCCCCCCcCCCC--CeEE-e-eeecccccceeeecCCeeEeEeeeeecccccceEEEEecce
Q psy3487 351 ACQLN---------ELEEGVAPTDSRLRPD--QRLL-E-VSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGR 417 (538)
Q Consensus 351 a~~l~---------e~~~~~~ptd~r~r~d--~r~~-e-~~hhpp~~a~~~e~~~~~~~~~~~~~~kF~G~s~~~~~~G~ 417 (538)
|+|.. +.+|.|+||++.-|+| +|++ | ||||||++|+|||+++|.|||+..+++||||+|++|.|.|.
T Consensus 495 avS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~ 574 (799)
T KOG1737|consen 495 AVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGLRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGI 574 (799)
T ss_pred HhhhcchhcccccCCCCcccccceEeeccCCceeeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCce
Confidence 99854 2234467899999998 4776 5 89999999999999999999999999999999999999999
Q ss_pred EEEEeecccc---------eEeeeeeccEEeEEEccceeeeccCC-CccccCCCCCCceEEecCC
Q psy3487 418 FNLVFTKSSM---------AVLHEVLGMYHSGVFKDGQLVSNKST-NKQDLKTIRGDQITWIDGR 472 (538)
Q Consensus 418 ~~~~~~~~g~---------~V~nEv~gl~~~g~f~~g~l~~~~~~-~~~~~~~~r~d~~~w~~g~ 472 (538)
++|.|...|. +|+|.+.|-.+..-..+-.+.+.++. +.|.+++.. ..|.+.+
T Consensus 575 l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge~~i~n~~~~~~~c~L~F~~---~~~~~~~ 636 (799)
T KOG1737|consen 575 LHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGEMEITNHTTGSDKCKLKFVK---AGYFSRN 636 (799)
T ss_pred EEEEEcCCCccccccCccceecceeeccccccccccEEEecCCCCcceeEEEEee---ecccCCC
Confidence 9999998554 66777777666666666677776665 356666543 4566555
No 7
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=99.96 E-value=1.6e-31 Score=278.77 Aligned_cols=164 Identities=40% Similarity=0.660 Sum_probs=128.9
Q ss_pred ceeeeeeccCCCCCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCCCCCCccceEEEeeeeecc---------ccc
Q psy3487 287 QIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQL---------NEL 357 (538)
Q Consensus 287 ~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~~~fa~~l---------~e~ 357 (538)
++|+++|+++|+|||+|+|||+++||+|+|||+||+|+|++||++|+..+| +.+||.+|++|++|. .+.
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~~d--~~eR~~~V~~f~~S~~~~~~~~~~KPf 78 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEEDD--PLERMLYVAAFALSSYSSTPGRTKKPF 78 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS-H--HHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCCCCC--HHHHHHHHHHHHHhhhhhhcCCCCcCc
Confidence 579999999999999999999999999999999999999999999999998 899999999999872 223
Q ss_pred cCCCCCCCCcCCC-CCeEE-e-eeecccccceeeecCCeeEeEeeeeecccccceEEEEecceEEEEeec----------
Q psy3487 358 EEGVAPTDSRLRP-DQRLL-E-VSHHPPIAAQYVEGKAWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTK---------- 424 (538)
Q Consensus 358 ~~~~~ptd~r~r~-d~r~~-e-~~hhpp~~a~~~e~~~~~~~~~~~~~~kF~G~s~~~~~~G~~~~~~~~---------- 424 (538)
+|.|++|++..++ +.+++ | |||||||+|+|+++++|+++|+..+++||+|+|+++.+.|.++|+|.+
T Consensus 79 NPiLGETfe~~~~~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~~p 158 (354)
T PF01237_consen 79 NPILGETFELVRPDGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWTKP 158 (354)
T ss_dssp ---TT-EE--TT-T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE--
T ss_pred CCCCcceeeeccCceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEecC
Confidence 3446667776664 34554 6 899999999999999999999999999999999999999999999996
Q ss_pred -----------------ccceEeeeeeccEEeEEEccceeeeccC
Q psy3487 425 -----------------SSMAVLHEVLGMYHSGVFKDGQLVSNKS 452 (538)
Q Consensus 425 -----------------~g~~V~nEv~gl~~~g~f~~g~l~~~~~ 452 (538)
+.+.|.+...++.+...|+.+++|+++.
T Consensus 159 ~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~ 203 (354)
T PF01237_consen 159 TTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKS 203 (354)
T ss_dssp SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSST
T ss_pred cEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccc
Confidence 3447777778899999999999888764
No 8
>KOG3710|consensus
Probab=99.93 E-value=1.3e-27 Score=222.37 Aligned_cols=92 Identities=41% Similarity=0.745 Sum_probs=87.0
Q ss_pred ccceEeeeeeccEEeEEEccceeeeccCCCccccCCCCCCceEEecCCccccccHHHHHhchHHHHHHhhhhccCCCCCc
Q psy3487 425 SSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGD 504 (538)
Q Consensus 425 ~g~~V~nEv~gl~~~g~f~~g~l~~~~~~~~~~~~~~r~d~~~w~~g~e~~~~~i~~l~~~~d~~~~~~~~~~~~~~~~~ 504 (538)
.|.+|++|+.++|..|.|.||||+++++.. .|+||||+|+|++|.|+||++|++|+|.+|++|.|| |+++|.
T Consensus 66 ~g~~v~~ev~~l~~~G~f~dgql~~~~~~~---~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~h~-----~~r~~~ 137 (280)
T KOG3710|consen 66 TGKFILKEVEALYETGAFRDGQLVSPDAFH---SKDIRGDKITWVGGNEPGCETIMLLPSPIDSVILHC-----NGRLGS 137 (280)
T ss_pred HHHHHHHHHHHHHhccCccCceeccCcCCc---chhhccCCceEecCCCCCccceeeecccchhhhhhh-----cccccc
Confidence 788999999999999999999999988765 479999999999999999999999999999999999 588899
Q ss_pred eeeccccceeeeeeCCCCccc
Q psy3487 505 FVINGRTKMLKEVYGHARVGH 525 (538)
Q Consensus 505 ~~i~~r~~am~acyp~~~~~~ 525 (538)
|.|+ |||||||||||||+||
T Consensus 138 ~~~g-RtkAMVAcYPGNGtgY 157 (280)
T KOG3710|consen 138 YIIG-RTKAMVACYPGNGTGY 157 (280)
T ss_pred cccc-ceeEEEEEecCCCcee
Confidence 8885 9999999999999999
No 9
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.86 E-value=3e-21 Score=161.65 Aligned_cols=87 Identities=44% Similarity=0.743 Sum_probs=78.6
Q ss_pred eEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCc-eEEEEEeccHHH
Q psy3487 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGV-QTFHIKASNEVE 94 (538)
Q Consensus 18 ~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~-~~~~L~A~s~~e 94 (538)
++|||.|+++..++||+|||||+++.|+||+++++....|+|.|+|..|.+.. .+++.|.|.++. ++|+|+|+|+.|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e 80 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQS 80 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHH
Confidence 47999999999999999999999999999999988655789999999999865 356899997666 999999999999
Q ss_pred HHHHHHHhHh
Q psy3487 95 RQRWVTALEL 104 (538)
Q Consensus 95 ~~~Wi~al~~ 104 (538)
++.|+++|+.
T Consensus 81 ~~~Wi~al~~ 90 (91)
T cd01247 81 RLLWMDSVVR 90 (91)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 10
>KOG2210|consensus
Probab=99.81 E-value=2.1e-20 Score=191.63 Aligned_cols=156 Identities=26% Similarity=0.314 Sum_probs=125.3
Q ss_pred ceeeeeecc-CCCCCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCCCCCCccceEEEeeeeecc--------c-c
Q psy3487 287 QIWSILKNS-IGKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQL--------N-E 356 (538)
Q Consensus 287 ~lw~i~k~~-iGkdls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~d~~~~~r~~~~~~fa~~l--------~-e 356 (538)
-+|+++++. .|+|||+++||.+++||+|+|++++|.+.++|||..+...+| +.+||..|+.|.++- + +
T Consensus 36 ~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~~~~--p~~R~~~VvkwylS~~~~~~~~~~~P 113 (392)
T KOG2210|consen 36 IILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASSEAD--PLERMLAVVKWYLSGFHAGPKGRKKP 113 (392)
T ss_pred eeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhcccccCCC--HHHHhhhheeeeehhcccccccccCC
Confidence 367777665 799999999999999999999999999999999999999998 889999999988872 2 1
Q ss_pred ccCCCCCCCCc-C----CC---CCeEE-e-eeecccccceeeecC--CeeEeEeeeeecccccceEEEEecceEEEEeec
Q psy3487 357 LEEGVAPTDSR-L----RP---DQRLL-E-VSHHPPIAAQYVEGK--AWKAWQDLAVHSKFRGKYIQVTPAGRFNLVFTK 424 (538)
Q Consensus 357 ~~~~~~ptd~r-~----r~---d~r~~-e-~~hhpp~~a~~~e~~--~~~~~~~~~~~~kF~G~s~~~~~~G~~~~~~~~ 424 (538)
.++-|++|+.+ + -| +..++ | +|||||++|+|++.+ +.++.|.+.+++||.|+|+.+.+.|..+|+|.+
T Consensus 114 yNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l~ll~ 193 (392)
T KOG2210|consen 114 YNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVLKLLD 193 (392)
T ss_pred CCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEEEEEe
Confidence 12223333321 1 11 22343 5 899999999998764 899999999999999999999999999999999
Q ss_pred ccceEeeeeeccEEeEEEcc
Q psy3487 425 SSMAVLHEVLGMYHSGVFKD 444 (538)
Q Consensus 425 ~g~~V~nEv~gl~~~g~f~~ 444 (538)
.++.++...+.++..|.+-.
T Consensus 194 ~~E~Y~~t~P~~~~rg~~~~ 213 (392)
T KOG2210|consen 194 HDETYLITFPNAYARGILLG 213 (392)
T ss_pred cCcceeeccCCceeeeeeec
Confidence 88877777777777754443
No 11
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=2.9e-19 Score=151.12 Aligned_cols=87 Identities=29% Similarity=0.562 Sum_probs=77.1
Q ss_pred eEEEEEeEcC--CCCCceEEEEEEeC--CEEEEEecccccCCceeEEEEccceeeec---CCceEEEEEeCceEEEEEec
Q psy3487 18 MKGWLFKWTN--YLKGYQKRWFVLSN--GLLSYYRNQAEMSHTCRGTISLRGAIIQT---EDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 18 ~~G~L~K~~~--~~k~Wk~RwFvL~~--~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~~~~~L~A~ 90 (538)
++|||.|+++ ..|+|++|||||++ +.|+||+++.|. .|+|.|+|.++.+.. +.++.|.|.+++++|+|+|+
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~--~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~ 78 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDA--KPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKAS 78 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcc--cccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECC
Confidence 4799999986 58999999999984 589999999877 899999999988743 23789999999999999999
Q ss_pred cHHHHHHHHHHhHhhh
Q psy3487 91 NEVERQRWVTALELAK 106 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~ 106 (538)
|+.|+++||++|+.++
T Consensus 79 s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 79 SDKQMNYWLQALQSKR 94 (95)
T ss_pred CHHHHHHHHHHHHhhc
Confidence 9999999999999753
No 12
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.79 E-value=7.1e-19 Score=150.23 Aligned_cols=88 Identities=24% Similarity=0.375 Sum_probs=80.1
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC--------CceEEEEEeCceEEEE
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE--------DSCTFIISNGVQTFHI 87 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~--------~~~~F~i~t~~~~~~L 87 (538)
+.++|||.|+++..+.|++|||||+++.|+||+++.+. .|+|.|+|..+.|... .+++|.|.+++++|+|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~--~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~ 79 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDP--VERGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLF 79 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCc--cEeeEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEE
Confidence 56899999999999999999999999999999999876 8899999999887432 3689999999999999
Q ss_pred EeccHHHHHHHHHHhHhh
Q psy3487 88 KASNEVERQRWVTALELA 105 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~a 105 (538)
+|+|+.|+++||.+|+..
T Consensus 80 ~A~s~~e~~~Wi~ai~~~ 97 (100)
T cd01233 80 QALSDKEMIDWLYALNPL 97 (100)
T ss_pred EcCCHHHHHHHHHHhhhh
Confidence 999999999999999864
No 13
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.79 E-value=7e-19 Score=151.01 Aligned_cols=88 Identities=20% Similarity=0.455 Sum_probs=76.4
Q ss_pred eEEEEEeEcCC-CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccce----eeec--------CCceEEEEEeCceE
Q psy3487 18 MKGWLFKWTNY-LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGA----IIQT--------EDSCTFIISNGVQT 84 (538)
Q Consensus 18 ~~G~L~K~~~~-~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~----~i~~--------~~~~~F~i~t~~~~ 84 (538)
++|||.|+|+. .++||+|||||+++.|+||+++.|. .|+|.|+|..+ .|.. ...++|.|.++.++
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~--~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rt 78 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDA--FAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERK 78 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCc--CcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeE
Confidence 58999999985 6999999999999999999999876 88999999754 3421 11249999999999
Q ss_pred EEEEeccHHHHHHHHHHhHhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
|+|.|+++.|+.+||++|+.+.+
T Consensus 79 y~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 79 FLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred EEEECCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999998864
No 14
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.75 E-value=5.2e-18 Score=146.37 Aligned_cols=88 Identities=27% Similarity=0.397 Sum_probs=75.7
Q ss_pred ceEEEEEeEcCCC-----CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------------CCceEEEEE
Q psy3487 17 EMKGWLFKWTNYL-----KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------------EDSCTFIIS 79 (538)
Q Consensus 17 ~~~G~L~K~~~~~-----k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------------~~~~~F~i~ 79 (538)
+++|||.|++... ++||+|||||++++|+||+++.+....|+|.|+|..+.+.. ...++|.|.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~ 80 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVV 80 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEEEE
Confidence 4799999997433 48999999999999999999987555799999999987421 135789999
Q ss_pred eCceEEEEEeccHHHHHHHHHHhHh
Q psy3487 80 NGVQTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 80 t~~~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
++.++|++.|+|+.|+++||.+|+.
T Consensus 81 t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 81 HDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred eCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 9999999999999999999999985
No 15
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.74 E-value=8.7e-18 Score=142.12 Aligned_cols=87 Identities=22% Similarity=0.365 Sum_probs=75.7
Q ss_pred eEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee-cC--------CceEEEEEeCceEE
Q psy3487 18 MKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ-TE--------DSCTFIISNGVQTF 85 (538)
Q Consensus 18 ~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~-~~--------~~~~F~i~t~~~~~ 85 (538)
++|||.|+++ .+|+|++|||+|+++.|+||++..+. ..++|.|+|..|... +. .+++|+|.+++++|
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~-~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~ 80 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKD-DPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTY 80 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCcc-CCCCceEEcccceEEeeccccccccccCcEEEEEcCCceE
Confidence 6899999988 89999999999999999999988654 233599999999842 21 14899999999999
Q ss_pred EEEeccHHHHHHHHHHhHhh
Q psy3487 86 HIKASNEVERQRWVTALELA 105 (538)
Q Consensus 86 ~L~A~s~~e~~~Wi~al~~a 105 (538)
+|+|+|+.|++.||++|+.|
T Consensus 81 ~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 81 ILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred EEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999999865
No 16
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.74 E-value=1.4e-17 Score=141.08 Aligned_cols=87 Identities=29% Similarity=0.570 Sum_probs=76.9
Q ss_pred ceEEEEEeEcCC----CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCc-eEEEE
Q psy3487 17 EMKGWLFKWTNY----LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGV-QTFHI 87 (538)
Q Consensus 17 ~~~G~L~K~~~~----~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~-~~~~L 87 (538)
+++|||.|++.. .+.|++|||||.++.|+||+++.+. .|.|.|+|.++.|.. ..+++|.|.+++ ++|+|
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~--~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f 78 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDE--KAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYF 78 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCC--ccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEE
Confidence 479999999763 4599999999999999999999876 788999999988742 356899999888 99999
Q ss_pred EeccHHHHHHHHHHhHhh
Q psy3487 88 KASNEVERQRWVTALELA 105 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~a 105 (538)
+|+++.|+++||.+|+.|
T Consensus 79 ~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 79 AAETLDDLSQWVNHLITA 96 (96)
T ss_pred EeCCHHHHHHHHHHHHhC
Confidence 999999999999999865
No 17
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.72 E-value=4.1e-17 Score=139.44 Aligned_cols=86 Identities=29% Similarity=0.536 Sum_probs=74.7
Q ss_pred eEEEEEeEcCCCCCceEEEEEEe--CCEEEEEecccccCCceeEEEEccceee-ec-----------CCceEEEEEeCce
Q psy3487 18 MKGWLFKWTNYLKGYQKRWFVLS--NGLLSYYRNQAEMSHTCRGTISLRGAII-QT-----------EDSCTFIISNGVQ 83 (538)
Q Consensus 18 ~~G~L~K~~~~~k~Wk~RwFvL~--~~~L~Yyk~~~d~~~~~~g~i~L~~~~i-~~-----------~~~~~F~i~t~~~ 83 (538)
.+|||.|++...+.|++|||||+ ++.|.||+++.+. .|+|.|+|..+.. .. ...+.|.|.++.+
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~--~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r 78 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDT--AEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKR 78 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCC--ccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCc
Confidence 48999999999999999999998 4599999999865 8899999998763 21 1235689899999
Q ss_pred EEEEEeccHHHHHHHHHHhHhh
Q psy3487 84 TFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a 105 (538)
+|+|.|+++.|+++|+.+|+.+
T Consensus 79 ~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 79 TYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred eEEEECCCHHHHHHHHHHHHhh
Confidence 9999999999999999999865
No 18
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.71 E-value=6.3e-17 Score=132.98 Aligned_cols=85 Identities=45% Similarity=0.753 Sum_probs=77.0
Q ss_pred EEEEeE-cCCCCCceEEEEEE--eCCEEEEEecccccCCceeEEEEccceeeecC-CceEEEEEeCceEEEEEeccHHHH
Q psy3487 20 GWLFKW-TNYLKGYQKRWFVL--SNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE-DSCTFIISNGVQTFHIKASNEVER 95 (538)
Q Consensus 20 G~L~K~-~~~~k~Wk~RwFvL--~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~-~~~~F~i~t~~~~~~L~A~s~~e~ 95 (538)
|||.|+ ++..++|++|||+| .+|+|+||+++.+. .++|+|+|..+.|..+ +..+|.|.++.++|+|+|.|+.|.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~--~~rGsi~v~~a~is~~~~~~~I~idsg~~i~hLKa~s~~~f 78 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSG--KLRGSIDVSLAVISANKKSRRIDIDSGDEIWHLKAKSQEDF 78 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCC--eeEeEEEccceEEEecCCCCEEEEEcCCeEEEEEcCCHHHH
Confidence 788876 66999999999999 78999999999876 8999999999998764 578999999999999999999999
Q ss_pred HHHHHHhHhhh
Q psy3487 96 QRWVTALELAK 106 (538)
Q Consensus 96 ~~Wi~al~~a~ 106 (538)
+.|+++|+.++
T Consensus 79 ~~Wv~aL~~a~ 89 (89)
T PF15409_consen 79 QRWVSALQKAK 89 (89)
T ss_pred HHHHHHHHhcC
Confidence 99999999763
No 19
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.70 E-value=1.3e-16 Score=142.01 Aligned_cols=91 Identities=25% Similarity=0.573 Sum_probs=79.1
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCc----------
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGV---------- 82 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~---------- 82 (538)
+++|||.|+++..+.|++|||||.++.|+||+++.+. .|+|.|+|.++.|.. ..+++|.|..+.
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~--~~~g~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~ 78 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKT 78 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCC--CceEEEECCCcEEEEcccCCCCeeEEEECCccccccccccc
Confidence 4789999999999999999999999999999998866 799999999988753 256789876544
Q ss_pred -----------eEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 83 -----------QTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 83 -----------~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
++|+|+|+++.|+++|+.+|+.+..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 79 ESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred cccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 588999999999999999999886653
No 20
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.67 E-value=5.1e-16 Score=129.60 Aligned_cols=88 Identities=61% Similarity=1.095 Sum_probs=78.3
Q ss_pred eEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCc-eEEEEEeccHHH
Q psy3487 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGV-QTFHIKASNEVE 94 (538)
Q Consensus 18 ~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~-~~~~L~A~s~~e 94 (538)
++|||.|+++..+.|++|||+|+++.|+||+++.+....|+|.|+|.++.+.. .++++|.|.+++ ++|+|+|++..|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e 80 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSEEE 80 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCCCCceEEEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCHHH
Confidence 58999999998899999999999999999999975434789999999998754 346899998877 999999999999
Q ss_pred HHHHHHHhHhh
Q psy3487 95 RQRWVTALELA 105 (538)
Q Consensus 95 ~~~Wi~al~~a 105 (538)
+.+|+.+|+.|
T Consensus 81 ~~~Wi~al~~a 91 (91)
T cd01246 81 RQRWVDALELA 91 (91)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 21
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.66 E-value=7.6e-16 Score=131.00 Aligned_cols=86 Identities=28% Similarity=0.431 Sum_probs=74.0
Q ss_pred CcceEEEEEeEcCCCCCceEEEEEEeCC------EEEEEecccccC---CceeEEEEccceeeec---C--CceEEEEEe
Q psy3487 15 DAEMKGWLFKWTNYLKGYQKRWFVLSNG------LLSYYRNQAEMS---HTCRGTISLRGAIIQT---E--DSCTFIISN 80 (538)
Q Consensus 15 ~~~~~G~L~K~~~~~k~Wk~RwFvL~~~------~L~Yyk~~~d~~---~~~~g~i~L~~~~i~~---~--~~~~F~i~t 80 (538)
++.++|||.|+ |.|+||||||+.+ .|.||+++.+.. ..|+|.|+|..|.... + ..+.|.|.+
T Consensus 1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t 76 (101)
T cd01257 1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYT 76 (101)
T ss_pred CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEe
Confidence 36789999998 8999999999976 899999997521 4799999999998431 2 358999999
Q ss_pred CceEEEEEeccHHHHHHHHHHhHh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
+.++|+|.|+++.|+++|+.+|..
T Consensus 77 ~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 77 RDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred CCceEEEEeCCHHHHHHHHHHHhh
Confidence 999999999999999999999853
No 22
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.64 E-value=5.5e-16 Score=130.67 Aligned_cols=83 Identities=24% Similarity=0.297 Sum_probs=74.9
Q ss_pred EEEEEeEcCC-CCCceEEEEEEeC----CEEEEEecccccCCceeEEEEccceeeec------CCceEEEEEeCce--EE
Q psy3487 19 KGWLFKWTNY-LKGYQKRWFVLSN----GLLSYYRNQAEMSHTCRGTISLRGAIIQT------EDSCTFIISNGVQ--TF 85 (538)
Q Consensus 19 ~G~L~K~~~~-~k~Wk~RwFvL~~----~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~~~~~F~i~t~~~--~~ 85 (538)
.|||.|+++. .|.||+|||+|.+ +.|+||+++.+. .|+|.|+|..+.|.+ ..+++|+|.++.+ +|
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~--~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y 79 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKT--KPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVY 79 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCC--CccceeeccccEEEEccccccCCCeEEEEecCCCCeEE
Confidence 5999999987 9999999999986 999999999987 899999999998865 3469999998875 99
Q ss_pred EEEeccHHHHHHHHHHhHh
Q psy3487 86 HIKASNEVERQRWVTALEL 104 (538)
Q Consensus 86 ~L~A~s~~e~~~Wi~al~~ 104 (538)
+++|++ .|+++||++|+.
T Consensus 80 ~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 80 YSCRSS-EERDKWIESLQA 97 (98)
T ss_pred EEeCCH-HHHHHHHHHHhc
Confidence 999999 999999999974
No 23
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.63 E-value=1.2e-15 Score=132.30 Aligned_cols=85 Identities=28% Similarity=0.447 Sum_probs=72.1
Q ss_pred eEEEEEeEcCCC----CCceEEEEEEeCCE-------EEEEecccccCCceeEEEEccceeeecC------C----ceEE
Q psy3487 18 MKGWLFKWTNYL----KGYQKRWFVLSNGL-------LSYYRNQAEMSHTCRGTISLRGAIIQTE------D----SCTF 76 (538)
Q Consensus 18 ~~G~L~K~~~~~----k~Wk~RwFvL~~~~-------L~Yyk~~~d~~~~~~g~i~L~~~~i~~~------~----~~~F 76 (538)
++|||.|++... +.|++|||||+++. |+||+++.+. .|.|.|+|..+.+... . .+.|
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~--k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f 78 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKF--KLEFVIDLESCSQVDPGLLCTAGNCIFGYGF 78 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCC--ccceEEECCccEEEcccccccccCcccceEE
Confidence 489999998843 59999999999765 6999998866 8899999999875421 1 2458
Q ss_pred EEEeCceEEEEEeccHHHHHHHHHHhHh
Q psy3487 77 IISNGVQTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 77 ~i~t~~~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
.|.++.++|+|.|+|+.|+++||.+|.+
T Consensus 79 ~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 79 DIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999975
No 24
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.63 E-value=1.2e-15 Score=130.17 Aligned_cols=85 Identities=27% Similarity=0.468 Sum_probs=70.5
Q ss_pred eEEEEEeEcC---------CCCCceEEEEEEe-CCEEEEEeccc-ccCCceeEEEEccceeeec------CCceEEEEEe
Q psy3487 18 MKGWLFKWTN---------YLKGYQKRWFVLS-NGLLSYYRNQA-EMSHTCRGTISLRGAIIQT------EDSCTFIISN 80 (538)
Q Consensus 18 ~~G~L~K~~~---------~~k~Wk~RwFvL~-~~~L~Yyk~~~-d~~~~~~g~i~L~~~~i~~------~~~~~F~i~t 80 (538)
++|||.|.+. ..|+||||||||+ ++.|+||+++. +. .|+|.|+|..|.... ..+++|.|.+
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~--~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~t 78 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTT--LPQGTIDMNQCTDVVDAEARTGQKFSICILT 78 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCc--ccceEEEccceEEEeecccccCCccEEEEEC
Confidence 4799999753 4789999999997 57888887653 44 789999999988532 1247999999
Q ss_pred CceEEEEEeccHHHHHHHHHHhHh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
+.++|+|.|+++.|++.|+++|..
T Consensus 79 p~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 79 PDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CCceEEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999863
No 25
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.63 E-value=2.2e-15 Score=126.48 Aligned_cols=88 Identities=30% Similarity=0.598 Sum_probs=76.7
Q ss_pred eEEEEEeEcCC-CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--C---CceEEEEEeCceEEEEEecc
Q psy3487 18 MKGWLFKWTNY-LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--E---DSCTFIISNGVQTFHIKASN 91 (538)
Q Consensus 18 ~~G~L~K~~~~-~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~---~~~~F~i~t~~~~~~L~A~s 91 (538)
++|||.|++.. .+.|++|||+|+++.|.||+++.+....+.+.|+|..+.|.. + .+++|.|.++.++|+|+|++
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s 80 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQADS 80 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccceEEecCccccCCceEEEEEcCCcEEEEECCC
Confidence 58999999865 889999999999999999999886445778999999887643 2 46899999999999999999
Q ss_pred HHHHHHHHHHhHhh
Q psy3487 92 EVERQRWVTALELA 105 (538)
Q Consensus 92 ~~e~~~Wi~al~~a 105 (538)
+.|+++|+.+|+.+
T Consensus 81 ~~~~~~Wi~al~~~ 94 (94)
T cd01250 81 EEERDDWISAIQES 94 (94)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999753
No 26
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.56 E-value=2.5e-14 Score=122.55 Aligned_cols=86 Identities=27% Similarity=0.461 Sum_probs=64.8
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEe-CCEEEEEecccccCCceeEEEEcccee-----eec---CCceEEEEE------e
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLS-NGLLSYYRNQAEMSHTCRGTISLRGAI-----IQT---EDSCTFIIS------N 80 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~-~~~L~Yyk~~~d~~~~~~g~i~L~~~~-----i~~---~~~~~F~i~------t 80 (538)
+.++|||.|+++..+.|++|||+|+ ++.|.||+++.+. ...|.++|.++. +.. ..++.|.|. +
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~--~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~ 78 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPED--GDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTV 78 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCc--cCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcc
Confidence 3589999999999999999999999 8899988876532 223555565554 321 245789886 2
Q ss_pred CceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
..++| .|+|+.|+++||.+|+.+
T Consensus 79 ~~r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 79 IERTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred cCEEE--EeCCHHHHHHHHHHHHhh
Confidence 23444 699999999999999865
No 27
>KOG0930|consensus
Probab=99.54 E-value=1.5e-14 Score=138.98 Aligned_cols=91 Identities=25% Similarity=0.573 Sum_probs=80.2
Q ss_pred CcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee----cCCceEEEEEeCc-------
Q psy3487 15 DAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ----TEDSCTFIISNGV------- 82 (538)
Q Consensus 15 ~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~----~~~~~~F~i~t~~------- 82 (538)
.|+.+|||.|+++ .+++||||||+|.++|||||.-..|. +|+|.|+|....|. |..+++|+|..++
T Consensus 259 npdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDK--EPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IK 336 (395)
T KOG0930|consen 259 NPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIK 336 (395)
T ss_pred CccccceeeeecCCcccchhheeEEeecceeeeeeeccCC--CCCcceeccccceeeccCCCCCCeEEEecCCCCcCeee
Confidence 4789999999987 99999999999999999999999877 99999999998873 4578999875442
Q ss_pred ---------------eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 83 ---------------QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 83 ---------------~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.+|.++|.++.|+..||++|+.+..
T Consensus 337 ACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 337 ACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred eecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 5899999999999999999997755
No 28
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.52 E-value=1.6e-13 Score=115.99 Aligned_cols=91 Identities=29% Similarity=0.565 Sum_probs=80.4
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc-cCCceeEEEEccceeeec----------CCceEEEEEeCce-
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE-MSHTCRGTISLRGAIIQT----------EDSCTFIISNGVQ- 83 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d-~~~~~~g~i~L~~~~i~~----------~~~~~F~i~t~~~- 83 (538)
+.++|||.|++...+.|++|||||.++.|+||+++.+ ....+.+.|+|.++.|.+ ..+++|.|.++..
T Consensus 1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~ 80 (104)
T PF00169_consen 1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGK 80 (104)
T ss_dssp EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCc
Confidence 3689999999999999999999999999999999983 335899999999999742 2458999999885
Q ss_pred EEEEEeccHHHHHHHHHHhHhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
+|+|.|+|+.|+..|+.+|+.+.
T Consensus 81 ~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 81 SYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999764
No 29
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.52 E-value=2.9e-14 Score=120.40 Aligned_cols=79 Identities=23% Similarity=0.515 Sum_probs=70.4
Q ss_pred CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecCC-----ceEEEEEeCc----eEEEEEeccHHHHHHH
Q psy3487 28 YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTED-----SCTFIISNGV----QTFHIKASNEVERQRW 98 (538)
Q Consensus 28 ~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~~-----~~~F~i~t~~----~~~~L~A~s~~e~~~W 98 (538)
.+|+||+|||+|+|+.|+|||++++....|.+.|+|.+|.|.++. .+.|.+.++. ++|+|+|+|+.++++|
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~W 95 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKW 95 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHHHHHH
Confidence 678899999999999999999999887889999999999998764 4566777665 8999999999999999
Q ss_pred HHHhHhhh
Q psy3487 99 VTALELAK 106 (538)
Q Consensus 99 i~al~~a~ 106 (538)
|.+++.|.
T Consensus 96 maa~rlas 103 (106)
T cd01237 96 MAACRLAS 103 (106)
T ss_pred HHHHHHhh
Confidence 99999774
No 30
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.49 E-value=2.1e-13 Score=115.43 Aligned_cols=74 Identities=22% Similarity=0.300 Sum_probs=64.4
Q ss_pred CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec---C----CceEEEEEeCceEEEEEeccHHHHHHHHH
Q psy3487 28 YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT---E----DSCTFIISNGVQTFHIKASNEVERQRWVT 100 (538)
Q Consensus 28 ~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~----~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~ 100 (538)
..+.||+|||+|.++.|+||+++. ..|.|+|+|..+.... + .++.|+|.++.++|+|.|+++.|+++||.
T Consensus 17 ~~~n~KkRwF~Lt~~~L~Y~k~~~---~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~ 93 (98)
T cd01244 17 KVLHFKKRYFQLTTTHLSWAKDVQ---CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLN 93 (98)
T ss_pred cCcCCceeEEEECCCEEEEECCCC---CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHH
Confidence 347899999999999999999886 3689999999888431 1 24789999999999999999999999999
Q ss_pred HhHh
Q psy3487 101 ALEL 104 (538)
Q Consensus 101 al~~ 104 (538)
+|+.
T Consensus 94 al~k 97 (98)
T cd01244 94 ALEK 97 (98)
T ss_pred HHhc
Confidence 9975
No 31
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.48 E-value=3.2e-13 Score=117.65 Aligned_cols=88 Identities=34% Similarity=0.671 Sum_probs=56.9
Q ss_pred eEEEEEeEcCC-CCCceEEEEEEe-CCEEEEEeccccc-----------CCceeEEEEccc----ee-ee---c---CCc
Q psy3487 18 MKGWLFKWTNY-LKGYQKRWFVLS-NGLLSYYRNQAEM-----------SHTCRGTISLRG----AI-IQ---T---EDS 73 (538)
Q Consensus 18 ~~G~L~K~~~~-~k~Wk~RwFvL~-~~~L~Yyk~~~d~-----------~~~~~g~i~L~~----~~-i~---~---~~~ 73 (538)
++|||.|+++. .++||+|||+|+ |+.|.|||.+.+. ...+.|.+.... .. +. + ...
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 68999999998 999999999999 9999999994221 112234433221 11 11 1 134
Q ss_pred eEEEEEeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 74 CTFIISNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 74 ~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
..|.|.+++++|+|+|++..|+.+|+++|+.|
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 67889999999999999999999999999865
No 32
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.44 E-value=5.9e-13 Score=116.78 Aligned_cols=89 Identities=22% Similarity=0.399 Sum_probs=70.9
Q ss_pred ceEEEEEe-E-cCCCCCceEEEEEEeCCEEEEEecccccC-CceeEEEEccceeeec---------CCceEEEEEeC--c
Q psy3487 17 EMKGWLFK-W-TNYLKGYQKRWFVLSNGLLSYYRNQAEMS-HTCRGTISLRGAIIQT---------EDSCTFIISNG--V 82 (538)
Q Consensus 17 ~~~G~L~K-~-~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-~~~~g~i~L~~~~i~~---------~~~~~F~i~t~--~ 82 (538)
+-.|||.- + .+..+.|+||||||+++.|+||+.++|.. ..|+|.|+|.+|.+.. ..++.|.|... +
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~ 81 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPK 81 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEeccc
Confidence 45799983 4 45889999999999999999999888643 5899999999998632 24678877432 1
Q ss_pred -----------------e-EEEEEeccHHHHHHHHHHhHhh
Q psy3487 83 -----------------Q-TFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 83 -----------------~-~~~L~A~s~~e~~~Wi~al~~a 105 (538)
+ -++|.|++.+|++.|+.+|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 82 METDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 2 2678999999999999999864
No 33
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.41 E-value=2.7e-12 Score=109.78 Aligned_cols=92 Identities=20% Similarity=0.326 Sum_probs=80.1
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccc---ccCCceeEEEEccceeeecC----CceEEEEEeCceEEEEE
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA---EMSHTCRGTISLRGAIIQTE----DSCTFIISNGVQTFHIK 88 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~---d~~~~~~g~i~L~~~~i~~~----~~~~F~i~t~~~~~~L~ 88 (538)
..++|||.|.+...+.|+.|||.|-++.|.|++... .....+++.|+|.++.|... .++.|.|.+..++|.|.
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~ 81 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQ 81 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCCCCcCceEEEecCCcEEEEE
Confidence 368999999999999999999999888999999642 23457889999999998542 47899999999999999
Q ss_pred eccHHHHHHHHHHhHhhhh
Q psy3487 89 ASNEVERQRWVTALELAKS 107 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a~~ 107 (538)
|+|+.|+.+|+.+|+.+++
T Consensus 82 A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 82 ARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred cCCHHHHHHHHHHHHHHhh
Confidence 9999999999999998865
No 34
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.32 E-value=9.4e-12 Score=109.95 Aligned_cols=86 Identities=19% Similarity=0.409 Sum_probs=70.8
Q ss_pred eEEEEEeEcCC------C------------CCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-eec--------
Q psy3487 18 MKGWLFKWTNY------L------------KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQT-------- 70 (538)
Q Consensus 18 ~~G~L~K~~~~------~------------k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~-------- 70 (538)
+|||+.|+++. . .+|++|||+|+++.|.||+++.+. .++|.|.|...- |..
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~--~~~~vil~D~~f~v~~~~~~~~~~ 78 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSA--QILDVILFDVDFKVNGGGKEDISL 78 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCC--ceeeEEEEcCCccEEeCCcccccc
Confidence 58999987651 1 169999999999999999999876 889999886432 321
Q ss_pred --------CCceEEEEEeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 71 --------EDSCTFIISNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 71 --------~~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
...+.|.|.++.|+|.|.|+|+.++.+|+++|+.|
T Consensus 79 ~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 79 AVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred cccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 22468999999999999999999999999999864
No 35
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.27 E-value=2.6e-11 Score=104.15 Aligned_cols=88 Identities=25% Similarity=0.396 Sum_probs=67.3
Q ss_pred eEEEEEeEcC--------CCCCceEEEEEEeCCEEEEEecccccCCceeE--EEEccceeeec-----CCceEEEEEe-C
Q psy3487 18 MKGWLFKWTN--------YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRG--TISLRGAIIQT-----EDSCTFIISN-G 81 (538)
Q Consensus 18 ~~G~L~K~~~--------~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g--~i~L~~~~i~~-----~~~~~F~i~t-~ 81 (538)
++|+|.++.. ..+.|++|||||+++.|+||+++.+......+ .|+|.++.|.. ..++.|.|.+ +
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~ 80 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPD 80 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEecC
Confidence 4788884321 56789999999999999999988643222234 77887776532 2458999865 4
Q ss_pred ceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 82 VQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 82 ~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
+++|.|+|+++.++..|+.+|+.+
T Consensus 81 ~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 81 GAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC
Confidence 589999999999999999999753
No 36
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.24 E-value=1.3e-10 Score=96.76 Aligned_cols=90 Identities=32% Similarity=0.594 Sum_probs=77.9
Q ss_pred ceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccC-CceeEEEEccceeeec-------CCceEEEEEeCce-EEE
Q psy3487 17 EMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMS-HTCRGTISLRGAIIQT-------EDSCTFIISNGVQ-TFH 86 (538)
Q Consensus 17 ~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-~~~~g~i~L~~~~i~~-------~~~~~F~i~t~~~-~~~ 86 (538)
.++|||.++.. ....|++|||+|.++.|.||+++.+.. ..+.+.|+|.++.+.. ...+.|.|..+.+ ++.
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~ 81 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYL 81 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEE
Confidence 58999999987 678899999999999999999887532 5788999999998742 1368899998887 999
Q ss_pred EEeccHHHHHHHHHHhHhhh
Q psy3487 87 IKASNEVERQRWVTALELAK 106 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~ 106 (538)
|.|+++.|+..|+.+|+.+.
T Consensus 82 f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 82 LQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEcCCHHHHHHHHHHHHHhh
Confidence 99999999999999998764
No 37
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.23 E-value=1.2e-10 Score=98.91 Aligned_cols=91 Identities=24% Similarity=0.368 Sum_probs=75.0
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceeeec-----CCceEEEEEeCceEEEEEe
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAIIQT-----EDSCTFIISNGVQTFHIKA 89 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~~~~~L~A 89 (538)
..+||+|.|.+.. ..|+|+||.+.|-.||+.+...+. ...++|.|+|.++.|.. +.+++|.|.++.++|.|.|
T Consensus 2 ~ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A 80 (99)
T cd01220 2 FIRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHEWGVPHCFTIFGGQCAITVAA 80 (99)
T ss_pred eeeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEeeccCCcCCceeEEEEcCCeEEEEEC
Confidence 3689999998763 468888887788777777765433 35789999999999852 2368999999999999999
Q ss_pred ccHHHHHHHHHHhHhhhh
Q psy3487 90 SNEVERQRWVTALELAKS 107 (538)
Q Consensus 90 ~s~~e~~~Wi~al~~a~~ 107 (538)
+|+.|+++|+.+|+.+++
T Consensus 81 ~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 81 STRAEKEKWLADLSKAIA 98 (99)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999999998875
No 38
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=9.3e-10 Score=90.52 Aligned_cols=88 Identities=38% Similarity=0.684 Sum_probs=74.7
Q ss_pred eEEEEEeEcCCC-CCceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceeeecC-----CceEEEEEeCc-eEEEEEe
Q psy3487 18 MKGWLFKWTNYL-KGYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAIIQTE-----DSCTFIISNGV-QTFHIKA 89 (538)
Q Consensus 18 ~~G~L~K~~~~~-k~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i~~~-----~~~~F~i~t~~-~~~~L~A 89 (538)
++|||.++.... ..|++|||+|.++.|.+|+...+. ...+.+.|+|.++.+... ..+.|.|...+ +.+.|+|
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~ 80 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQA 80 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEe
Confidence 479999988665 889999999999999999988652 247889999999887532 36899999887 9999999
Q ss_pred ccHHHHHHHHHHhHhh
Q psy3487 90 SNEVERQRWVTALELA 105 (538)
Q Consensus 90 ~s~~e~~~Wi~al~~a 105 (538)
+|+.|+..|+.+|+.+
T Consensus 81 ~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 81 ESEEEREEWIEALQSA 96 (96)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999999999753
No 39
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.04 E-value=1.6e-09 Score=89.07 Aligned_cols=88 Identities=22% Similarity=0.367 Sum_probs=73.0
Q ss_pred cceEEEEEeEcC--CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee------cCCceEEEEEeCc-----
Q psy3487 16 AEMKGWLFKWTN--YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ------TEDSCTFIISNGV----- 82 (538)
Q Consensus 16 ~~~~G~L~K~~~--~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~------~~~~~~F~i~t~~----- 82 (538)
++..|||.-..- +..+=|+|||||.+.+|+||++.+|. +++|.|+|.+..+. +..+++|+|..+.
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeK--E~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvy 78 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEK--EKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVY 78 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccc--cccceeeccccEEEeecccccCCCcEEEEEcCcccccc
Confidence 357899987543 44558999999999999999999987 89999999999974 2467999997654
Q ss_pred ---eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 83 ---QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 83 ---~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
++.-|.|++.+|.+.|-.++-.|
T Consensus 79 kd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 79 KDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred cchheeeecCCCHHHHHHHHHHHHhc
Confidence 67789999999999999886654
No 40
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.97 E-value=5.9e-09 Score=86.32 Aligned_cols=86 Identities=30% Similarity=0.541 Sum_probs=72.4
Q ss_pred eEEEEEeEcCCC----CCceEEEEEEeCCEEEEEecccccCCcee-EEEEccceeeecC-----CceEEEEEeC---ceE
Q psy3487 18 MKGWLFKWTNYL----KGYQKRWFVLSNGLLSYYRNQAEMSHTCR-GTISLRGAIIQTE-----DSCTFIISNG---VQT 84 (538)
Q Consensus 18 ~~G~L~K~~~~~----k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~-g~i~L~~~~i~~~-----~~~~F~i~t~---~~~ 84 (538)
.+|||.+++... ..|++|||+|.++.|.||+.+.+. .+. +.++|..+.+... .++.|.|... .+.
T Consensus 1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~--~~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~ 78 (99)
T cd00900 1 KEGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKK--EIKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRV 78 (99)
T ss_pred CccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCC--cCCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEE
Confidence 369999988764 789999999999999999999865 333 6888988876543 3689999887 799
Q ss_pred EEEEeccHHHHHHHHHHhHhh
Q psy3487 85 FHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a 105 (538)
+.|+|+++.|+..|+.+|+.+
T Consensus 79 ~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 79 FVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred EEEEcCCHHHHHHHHHHHhcC
Confidence 999999999999999999853
No 41
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.97 E-value=4.6e-09 Score=91.78 Aligned_cols=90 Identities=14% Similarity=0.265 Sum_probs=70.5
Q ss_pred eEEEEEeEc------C----CCCCceEEEEEEeCCEEEEEecccccC-----CceeEEEEccceee--ec---CCceEEE
Q psy3487 18 MKGWLFKWT------N----YLKGYQKRWFVLSNGLLSYYRNQAEMS-----HTCRGTISLRGAII--QT---EDSCTFI 77 (538)
Q Consensus 18 ~~G~L~K~~------~----~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-----~~~~g~i~L~~~~i--~~---~~~~~F~ 77 (538)
++|+|.++. . ....|++||+||+++.|+.||++.... ......|.|.++.+ .. ..++.|.
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~ 81 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHVFR 81 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcEEE
Confidence 679988652 1 246899999999999999999996310 13346788888763 22 3578999
Q ss_pred EEeCc-eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 78 ISNGV-QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 78 i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
|.++. +.|.|+|.+..|++.|+.+|+.+..
T Consensus 82 L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~ 112 (117)
T cd01230 82 LRTADWREFLFQTSSLKELQSWIERINVVAA 112 (117)
T ss_pred EEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 99875 9999999999999999999997754
No 42
>KOG1739|consensus
Probab=98.89 E-value=1.5e-09 Score=111.84 Aligned_cols=95 Identities=43% Similarity=0.759 Sum_probs=87.4
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCceEEEEEec
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~~~~~L~A~ 90 (538)
.+.++..|+|.||.+...+|+.|||+|.++.|.||++..+....|||.|.|..+.|.+ .+.++|.|.++-.+++++|.
T Consensus 21 dgw~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahEfDe~rfdIsvn~nv~~lra~ 100 (611)
T KOG1739|consen 21 DGWVERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITAHEFDECRFDISVNDNVWYLRAQ 100 (611)
T ss_pred CCchhhcceeeeeecccccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCcccccchhheeeeEeccceeeehhc
Confidence 4567888999999999999999999999999999999998888999999999999854 57899999999999999999
Q ss_pred cHHHHHHHHHHhHhhhh
Q psy3487 91 NEVERQRWVTALELAKS 107 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~~ 107 (538)
+...++.|+.+|+..+.
T Consensus 101 ~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 101 DPDHRQQWIDALEWMKT 117 (611)
T ss_pred CcHHHHHHHHHHHHHhh
Confidence 99999999999987654
No 43
>KOG0690|consensus
Probab=98.80 E-value=5.1e-09 Score=104.24 Aligned_cols=98 Identities=26% Similarity=0.412 Sum_probs=75.4
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEe-CCEEEEEeccc-ccC--CceeEEEEccceeee---cCCceEEEEEeCc--
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLS-NGLLSYYRNQA-EMS--HTCRGTISLRGAIIQ---TEDSCTFIISNGV-- 82 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~-~~~L~Yyk~~~-d~~--~~~~g~i~L~~~~i~---~~~~~~F~i~t~~-- 82 (538)
+...+.++|||+|+|.+.++|++|||+|. ||.|.=|++.. +.+ ..|...+.+.+|.+. ..+++.|.|..-+
T Consensus 11 ~~~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWT 90 (516)
T KOG0690|consen 11 SQEDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWT 90 (516)
T ss_pred chhhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhccCCCCceEEEEeeeee
Confidence 46778999999999999999999999996 78888888664 332 356677777777753 2457889886544
Q ss_pred --eEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 83 --QTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 83 --~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
-.-.|-++++.++++|+.+|+...+..
T Consensus 91 TVIERTF~ves~~eRq~W~~AIq~vsn~l 119 (516)
T KOG0690|consen 91 TVIERTFYVESAEERQEWIEAIQAVSNRL 119 (516)
T ss_pred eeeeeeeecCCHHHHHHHHHHHHHHhhhh
Confidence 223556899999999999999876553
No 44
>KOG1090|consensus
Probab=98.78 E-value=1.7e-09 Score=118.84 Aligned_cols=89 Identities=25% Similarity=0.427 Sum_probs=77.7
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEe--CCEEEEEecccccCCceeEEEEccceee-e------cCCceEEEEEeCceEEE
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLS--NGLLSYYRNQAEMSHTCRGTISLRGAII-Q------TEDSCTFIISNGVQTFH 86 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~--~~~L~Yyk~~~d~~~~~~g~i~L~~~~i-~------~~~~~~F~i~t~~~~~~ 86 (538)
-..+|||.|+|..+|.|+.|||||+ ...|+||.+..|. +|.|.|+|..... . .+.+.-|++.+..++|.
T Consensus 1634 r~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt--~pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvyn 1711 (1732)
T KOG1090|consen 1634 RIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDT--KPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYN 1711 (1732)
T ss_pred cCcccchhhcchhhcccccceeEecCCccceeeecccccc--cccchhhhhhhhhhcccCccccCccceeeeehhhHHHH
Confidence 3459999999999999999999997 4899999999877 8999999987763 1 13456789999999999
Q ss_pred EEeccHHHHHHHHHHhHhhh
Q psy3487 87 IKASNEVERQRWVTALELAK 106 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~ 106 (538)
|.|.|..+.++|++.|+.+.
T Consensus 1712 f~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1712 FCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHhccchHHHHHHHHHHHhh
Confidence 99999999999999998753
No 45
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.76 E-value=8.4e-09 Score=85.59 Aligned_cols=86 Identities=26% Similarity=0.391 Sum_probs=65.9
Q ss_pred ceEEEEEeEcC-CCCCceEEEEEEeCC-----EEEEEecccccCCceeEEEEccceeeec---CC------------ceE
Q psy3487 17 EMKGWLFKWTN-YLKGYQKRWFVLSNG-----LLSYYRNQAEMSHTCRGTISLRGAIIQT---ED------------SCT 75 (538)
Q Consensus 17 ~~~G~L~K~~~-~~k~Wk~RwFvL~~~-----~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~~------------~~~ 75 (538)
..+|||.|.|. ..|.||||||+|.+- .++-|+.+ +++|...+.|.|.+|+- .. .+-
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ek---ks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~f 79 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREK---KAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHF 79 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhh---cCCchhheeecceEEeccCCCCCCcccccccccchhh
Confidence 48999999998 899999999999952 23333333 45788899999999852 11 123
Q ss_pred EEEEeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 76 FIISNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 76 F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
|..+..+.+..|..+++.||+.|++++-.|
T Consensus 80 f~avkegd~~~fa~~de~~r~lwvqa~yra 109 (117)
T cd01234 80 FNAVKEGDELKFATDDENERHLWVQAMYRA 109 (117)
T ss_pred hheeccCcEEEEeccchHHHHHHHHHHHHH
Confidence 556666778899999999999999998755
No 46
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.71 E-value=2.1e-07 Score=79.39 Aligned_cols=90 Identities=23% Similarity=0.356 Sum_probs=69.8
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCC-EEEEEecccccCCceeEEEEccce-eeecCCceEEEEEeCceEEEEEec
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNG-LLSYYRNQAEMSHTCRGTISLRGA-IIQTEDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~-~L~Yyk~~~d~~~~~~g~i~L~~~-~i~~~~~~~F~i~t~~~~~~L~A~ 90 (538)
.+.+.++|++.|+.+.+ .++|+|+|.|+ .|+|+..... ...|.|+++.. .+...+...|.|++++++|+|..
T Consensus 10 ge~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~---~~KGeI~~~~~l~v~~k~~~~F~I~tp~RtY~l~d- 83 (104)
T PF14593_consen 10 GELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKM---VLKGEIPWSKELSVEVKSFKTFFIHTPKRTYYLED- 83 (104)
T ss_dssp T--EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT---EEEEEE--STT-EEEECSSSEEEEEETTEEEEEE--
T ss_pred CCeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCC---eECcEEecCCceEEEEccCCEEEEECCCcEEEEEC-
Confidence 56789999999998877 99999999986 8888887753 56799999954 46666778999999999999987
Q ss_pred cHHHHHHHHHHhHhhhhh
Q psy3487 91 NEVERQRWVTALELAKSK 108 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~~~ 108 (538)
.+.+...|+++|+.....
T Consensus 84 ~~~~A~~W~~~I~~~~~~ 101 (104)
T PF14593_consen 84 PEGNAQQWVEAIEEVKKQ 101 (104)
T ss_dssp TTS-HHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 445578899999987543
No 47
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.68 E-value=1.4e-07 Score=83.15 Aligned_cols=88 Identities=22% Similarity=0.409 Sum_probs=60.0
Q ss_pred eEEEEEeEc--------C--CCCCceEEEEEEeCCEEEEEeccccc------------CCceeEEEEccceeeec-----
Q psy3487 18 MKGWLFKWT--------N--YLKGYQKRWFVLSNGLLSYYRNQAEM------------SHTCRGTISLRGAIIQT----- 70 (538)
Q Consensus 18 ~~G~L~K~~--------~--~~k~Wk~RwFvL~~~~L~Yyk~~~d~------------~~~~~g~i~L~~~~i~~----- 70 (538)
++|||.++. . ..+.|+.-|+||+++.|+.|+++... ...|.+.|.|.++....
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~dY~ 81 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASDYT 81 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETTBT
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcccc
Confidence 689999752 1 34579999999999999999985321 12355679999887643
Q ss_pred CCceEEEEEeC-ceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 71 EDSCTFIISNG-VQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 71 ~~~~~F~i~t~-~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
..++.|.|.+. +..|.|+|.|+.|+..||.+|+.+
T Consensus 82 Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~ 117 (119)
T PF15410_consen 82 KRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYA 117 (119)
T ss_dssp TCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhh
Confidence 35799999876 589999999999999999999875
No 48
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.57 E-value=4.8e-07 Score=77.91 Aligned_cols=89 Identities=20% Similarity=0.315 Sum_probs=66.2
Q ss_pred ceEEEEE--eEcCCCCCceEEEEEEeCCEEEEEecccccCCc----eeEEEEccce--eee------------cCCceEE
Q psy3487 17 EMKGWLF--KWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHT----CRGTISLRGA--IIQ------------TEDSCTF 76 (538)
Q Consensus 17 ~~~G~L~--K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~----~~g~i~L~~~--~i~------------~~~~~~F 76 (538)
..||||+ |.++..++|+++|.||.+..|+.|..+.+.... +.-.|.|++- .|. .+-|+.|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 4799998 455667899999999999999999988764332 3344666432 221 1346788
Q ss_pred EEEeCc-------eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 77 IISNGV-------QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 77 ~i~t~~-------~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
.|.+.. .+.+|-|+++.|+++|+.+|+.-
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 886532 78899999999999999999854
No 49
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.52 E-value=1.2e-06 Score=74.26 Aligned_cols=89 Identities=22% Similarity=0.389 Sum_probs=67.4
Q ss_pred eEEEEEe--EcCC--CCCceEEEEEEeCCEEEEEeccccc-CCceeEEEEcccee-e---------e---cCCceEEEEE
Q psy3487 18 MKGWLFK--WTNY--LKGYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAI-I---------Q---TEDSCTFIIS 79 (538)
Q Consensus 18 ~~G~L~K--~~~~--~k~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~-i---------~---~~~~~~F~i~ 79 (538)
+||||+- .++. .++|+++|.||.+..|..|..+.+. ...|.-.|+|.... | . .+-|+.|.|.
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~ 81 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQIL 81 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEEE
Confidence 6899983 3343 4699999999999999999988754 24566677776411 1 1 1346889887
Q ss_pred eCc--eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 80 NGV--QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 80 t~~--~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
..+ ++.+|-|+++.|++.|+.+|..-+
T Consensus 82 ~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 82 YANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred eCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 765 899999999999999999987543
No 50
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.51 E-value=1.5e-06 Score=74.40 Aligned_cols=93 Identities=20% Similarity=0.317 Sum_probs=75.3
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecc-cccCCceeEEEEccceeeec--C---CceEEEEEeCceEEEEEe
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQ-AEMSHTCRGTISLRGAIIQT--E---DSCTFIISNGVQTFHIKA 89 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~-~d~~~~~~g~i~L~~~~i~~--~---~~~~F~i~t~~~~~~L~A 89 (538)
...+|-|.|.. .++-+.|+|.|=++.|-|-+-. .......++.++|.++.|.. + -++.|.|.++.++|.+.|
T Consensus 4 li~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A 81 (104)
T cd01218 4 LVGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYA 81 (104)
T ss_pred EEecCcEEEee--cCCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEEEecCCcccccceEEEecCCeEEEEEc
Confidence 46799999987 5557889999988899996532 11234667899999998742 2 258999999999999999
Q ss_pred ccHHHHHHHHHHhHhhhhhhc
Q psy3487 90 SNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 90 ~s~~e~~~Wi~al~~a~~~~~ 110 (538)
+|+.|+.+|+++|+.|++...
T Consensus 82 ~s~~eK~eWl~~i~~ai~~~l 102 (104)
T cd01218 82 ATETEKREWMLHINKCVTDLL 102 (104)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999987643
No 51
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.50 E-value=1e-06 Score=75.30 Aligned_cols=87 Identities=17% Similarity=0.371 Sum_probs=70.7
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-ee---------cCCceEEEEEeCceEEE
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQ---------TEDSCTFIISNGVQTFH 86 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~---------~~~~~~F~i~t~~~~~~ 86 (538)
.+||||.-.++.=+.|||+|++|+..+|.+|+++.+. ++-..|+|..+. |. ...+++|+|.+.+.+|+
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~s--kyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~ 78 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGS--RYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYF 78 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCCCC--eeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEE
Confidence 3799999999988999999999999999999998865 777899998766 32 13568999999999999
Q ss_pred EEecc--------------------HHHHHHHHHHhHhh
Q psy3487 87 IKASN--------------------EVERQRWVTALELA 105 (538)
Q Consensus 87 L~A~s--------------------~~e~~~Wi~al~~a 105 (538)
+..+. ....+.|-.+|++|
T Consensus 79 VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 79 VGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred ecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 96542 23456788888764
No 52
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.28 E-value=1.3e-06 Score=74.27 Aligned_cols=88 Identities=25% Similarity=0.340 Sum_probs=63.7
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEE---EEccceee----------ecCCceEEEEEeCc-
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGT---ISLRGAII----------QTEDSCTFIISNGV- 82 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~---i~L~~~~i----------~~~~~~~F~i~t~~- 82 (538)
+++|+|+-+....|.||||||+|+..-|+|.-..... +++-. ..+.+..| .+..+++|.|..+.
T Consensus 1 e~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk--~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~ 78 (114)
T cd01259 1 EMEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTK--NTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGD 78 (114)
T ss_pred CccceEEEccCCCccceEEEEEEeCCeeEEccCCCcC--CHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEecccc
Confidence 4789999988899999999999999999988765432 22211 22333333 12346788885543
Q ss_pred ------eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 83 ------QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 83 ------~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
..-.|+|+|+..+..|+.+|+-++
T Consensus 79 q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 79 QSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred CcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 355889999999999999998764
No 53
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.16 E-value=2.4e-05 Score=67.77 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=75.4
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc---------CCceeEEEEccceeeecC-----CceEEEEEeC
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM---------SHTCRGTISLRGAIIQTE-----DSCTFIISNG 81 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~---------~~~~~g~i~L~~~~i~~~-----~~~~F~i~t~ 81 (538)
.++||-|.|-+...+..+.|+|-|=|+.|-|.|..... ....++.++|..+.|... -++.|.|.+.
T Consensus 4 lI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~~~ 83 (112)
T cd01261 4 FIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEIILK 83 (112)
T ss_pred ccccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEEcC
Confidence 46899999988766789999999999999999964431 245678899999988532 2689999885
Q ss_pred -ceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 82 -VQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 82 -~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
++.|.|.|.+++|..+|++++..+..
T Consensus 84 ~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 84 DGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 68899999999999999999987754
No 54
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.03 E-value=3.1e-05 Score=65.67 Aligned_cols=86 Identities=15% Similarity=0.391 Sum_probs=58.7
Q ss_pred eEEEEEeEcC-CCC-CceEEEEEEeC--CEE---EEEe-cccccCCce--eEEEEccceeeec----CCceEEEEEeCce
Q psy3487 18 MKGWLFKWTN-YLK-GYQKRWFVLSN--GLL---SYYR-NQAEMSHTC--RGTISLRGAIIQT----EDSCTFIISNGVQ 83 (538)
Q Consensus 18 ~~G~L~K~~~-~~k-~Wk~RwFvL~~--~~L---~Yyk-~~~d~~~~~--~g~i~L~~~~i~~----~~~~~F~i~t~~~ 83 (538)
++|||..+.+ .++ .|.+.||.... +.+ .+.. +..+..... --.|.|..|.+.+ ++.+||+|.++.+
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~r~~~~~dRRFCFei~~~~~ 80 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSRRKTESIDKRFCFDVEVEEK 80 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccccccCCccceeeEeeeecCC
Confidence 5899998765 333 69999998863 343 2322 211111111 1346677777643 4568999988775
Q ss_pred --EEEEEeccHHHHHHHHHHhH
Q psy3487 84 --TFHIKASNEVERQRWVTALE 103 (538)
Q Consensus 84 --~~~L~A~s~~e~~~Wi~al~ 103 (538)
++.|+|+++.++..||.++.
T Consensus 81 ~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 81 PGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred CCeEEEEecCHHHHHHHHHhhc
Confidence 89999999999999999985
No 55
>KOG2059|consensus
Probab=97.95 E-value=1.5e-05 Score=86.55 Aligned_cols=99 Identities=22% Similarity=0.267 Sum_probs=76.2
Q ss_pred CcccCCCCCcceEEE-EEeEcC-----CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCc
Q psy3487 7 TDIKASHSDAEMKGW-LFKWTN-----YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDS 73 (538)
Q Consensus 7 ~~~~~~~~~~~~~G~-L~K~~~-----~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~ 73 (538)
.+......++.++|. |.|+.. +.+.+|+|||.|.+..|+|.|+++. .|.++|+|.++.... +.+
T Consensus 555 ~~~~~p~~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~---q~~~~Ipl~nI~avEklee~sF~~k 631 (800)
T KOG2059|consen 555 RSSLSPQEPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK---QPIYTIPLSNIRAVEKLEEKSFKMK 631 (800)
T ss_pred ccccCCCCCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc---CcccceeHHHHHHHHHhhhhccCCC
Confidence 333333444455554 555433 3467899999999999999999975 578999999887432 347
Q ss_pred eEEEEEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 74 CTFIISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 74 ~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+.|.|+...++.+++|.+-.|..+|+++|......
T Consensus 632 nv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~ 666 (800)
T KOG2059|consen 632 NVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCC 666 (800)
T ss_pred ceEEEEecCcceeEecCCchHHHHHHHHHHHHhcc
Confidence 89999888899999999999999999999876554
No 56
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=97.91 E-value=1.1e-05 Score=67.93 Aligned_cols=94 Identities=19% Similarity=0.368 Sum_probs=69.1
Q ss_pred CcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-ee-----cCCceEEEEEe-CceEEE
Q psy3487 15 DAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQ-----TEDSCTFIISN-GVQTFH 86 (538)
Q Consensus 15 ~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~-----~~~~~~F~i~t-~~~~~~ 86 (538)
++++.||+.|.|+ ....||+|||-|-.+.|.+|....+.. ...|.+..+. |. -...+|+.|.. +...+.
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~---~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~v 78 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANK---PELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIV 78 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccC---CcEEEeehhhhcchhheeeccCceEEEEEcCCceEE
Confidence 5689999999998 567899999999999999975544432 2355555443 22 13456776655 357899
Q ss_pred EEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 87 IKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
|.++++.+..+|...|+.+-..+.+
T Consensus 79 lt~~d~i~l~qW~~elr~a~r~Sq~ 103 (116)
T cd01240 79 LTNSDEIELKQWKKELRDAHRESQQ 103 (116)
T ss_pred EecCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998876544444
No 57
>KOG0248|consensus
Probab=97.90 E-value=4.3e-06 Score=89.92 Aligned_cols=95 Identities=21% Similarity=0.397 Sum_probs=83.4
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCceEEEEEec
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~~~~~L~A~ 90 (538)
+...+++||+.+-+...+.|+|||||++++.+.||+.+.+....|.+.+++....+.. .....|.+++...++++.++
T Consensus 246 ~e~~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~ 325 (936)
T KOG0248|consen 246 RETMEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTE 325 (936)
T ss_pred cchhhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccccccceeeccchhHHhhhhhhceeEEEecc
Confidence 4667889999999999999999999999999999999998888899999888766533 45678999999999999999
Q ss_pred cHHHHHHHHHHhHhhhh
Q psy3487 91 NEVERQRWVTALELAKS 107 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~~ 107 (538)
++.--.+|++.|+..+.
T Consensus 326 s~~lt~dw~~iL~~~iK 342 (936)
T KOG0248|consen 326 SERTTHDWVTILSAAIK 342 (936)
T ss_pred ChhhhhhhHHHHHHHHH
Confidence 99999999998887654
No 58
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.85 E-value=0.00011 Score=60.40 Aligned_cols=84 Identities=18% Similarity=0.296 Sum_probs=65.5
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeC-CEEEEEecccccCCceeEEEEcccee--eecCCceEEEEEeCceEEEEEeccHH
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSN-GLLSYYRNQAEMSHTCRGTISLRGAI--IQTEDSCTFIISNGVQTFHIKASNEV 93 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~-~~L~Yyk~~~d~~~~~~g~i~L~~~~--i~~~~~~~F~i~t~~~~~~L~A~s~~ 93 (538)
.+.|.+.|+.+.+ +++|=++|.| ..|.|..... ...+|.|+++... +...+...|.|++++++|+|. +...
T Consensus 2 l~~g~v~Kr~glf--~kkR~LiLTd~PrL~yvdp~~---~~~KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~ 75 (89)
T cd01262 2 LKIGAVKKRKGLF--AKKRQLILTNGPRLIYVDPVK---KVVKGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPKG 75 (89)
T ss_pred ceeeeeeehhccc--cceeeEEEecCceEEEEcCCc---CeEEeEecccccceEEEEecCccEEEECCCceEEEE-CCCC
Confidence 5689999988864 8999999986 5666666553 3678999999844 344566899999999999995 4457
Q ss_pred HHHHHHHHhHhhh
Q psy3487 94 ERQRWVTALELAK 106 (538)
Q Consensus 94 e~~~Wi~al~~a~ 106 (538)
..+.|+.+|+.+.
T Consensus 76 ~a~~W~~~I~~~~ 88 (89)
T cd01262 76 RASQWKKAIEDLQ 88 (89)
T ss_pred CHHHHHHHHHHHh
Confidence 7888999998653
No 59
>KOG0521|consensus
Probab=97.80 E-value=7.6e-06 Score=92.91 Aligned_cols=96 Identities=24% Similarity=0.421 Sum_probs=79.6
Q ss_pred CCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-----CCceEEEEEeCceEEEE
Q psy3487 14 SDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-----EDSCTFIISNGVQTFHI 87 (538)
Q Consensus 14 ~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~~~~~L 87 (538)
....+.|+|.|+.. ..+.|+||||-..++.|.|+..-.+... ....+|..|.|.+ +..+||+|++++++|+|
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~--~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~l 349 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAEN--VLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLL 349 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccc--cccccchhccccCCcccccceeeEEEecCCcceEE
Confidence 34567789998766 5899999999999999999998876522 5678888888854 35689999999999999
Q ss_pred EeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 88 KASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
+|+++.+++.||.+|+..+..+..
T Consensus 350 QAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 350 QAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred ecCchhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988776433
No 60
>KOG3640|consensus
Probab=97.77 E-value=3.3e-05 Score=86.11 Aligned_cols=94 Identities=20% Similarity=0.373 Sum_probs=73.6
Q ss_pred CCcceEEEEEeE--cCCCCCceEEEEEEeCCEEEEEecccccC-CceeEEEEccceeee---c------CCceEEEEEe-
Q psy3487 14 SDAEMKGWLFKW--TNYLKGYQKRWFVLSNGLLSYYRNQAEMS-HTCRGTISLRGAIIQ---T------EDSCTFIISN- 80 (538)
Q Consensus 14 ~~~~~~G~L~K~--~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-~~~~g~i~L~~~~i~---~------~~~~~F~i~t- 80 (538)
-.++-.|+|.-. +..+..|.||||+|.+|++.|+|.++|++ ..|+|.|+|..|+-. + ..++.|.|..
T Consensus 988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen 988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence 345667998854 44777899999999999999999998764 679999999999842 2 1356787651
Q ss_pred -----C-------ce-EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 81 -----G-------VQ-TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 81 -----~-------~~-~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
. .+ ...|.|++.+|++.|+.+|..+-.
T Consensus 1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~ 1107 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLK 1107 (1116)
T ss_pred cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHH
Confidence 1 13 678999999999999999987643
No 61
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.53 E-value=0.00031 Score=60.25 Aligned_cols=85 Identities=13% Similarity=0.273 Sum_probs=65.3
Q ss_pred EEEEeEcC----CCCCceEEEEEEeCCEEEEEeccccc---CCceeEEEEcc--ceee------ec---CCceEEEEEeC
Q psy3487 20 GWLFKWTN----YLKGYQKRWFVLSNGLLSYYRNQAEM---SHTCRGTISLR--GAII------QT---EDSCTFIISNG 81 (538)
Q Consensus 20 G~L~K~~~----~~k~Wk~RwFvL~~~~L~Yyk~~~d~---~~~~~g~i~L~--~~~i------~~---~~~~~F~i~t~ 81 (538)
|||..+-. ..+.||+||++|+++-|..|+++.-. =..|.-..+|. -..+ .. ..+++|.+.++
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg 82 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTG 82 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcC
Confidence 88887633 45899999999999999999988532 14555566665 2222 11 35689999888
Q ss_pred c--eEEEEEeccHHHHHHHHHHhHh
Q psy3487 82 V--QTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 82 ~--~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
. ++.+|+.++..|+..|..+|+.
T Consensus 83 ~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 83 TQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CceeeEEEEecCHHHHHHHHHHHhc
Confidence 7 7999999999999999999874
No 62
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.49 E-value=0.00046 Score=76.45 Aligned_cols=95 Identities=19% Similarity=0.337 Sum_probs=69.3
Q ss_pred CcceEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecCCc---------eEEEEEe--
Q psy3487 15 DAEMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS---------CTFIISN-- 80 (538)
Q Consensus 15 ~~~~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~~~---------~~F~i~t-- 80 (538)
.+.+||||..-+. ...--++|||||++..|.|||.+......|+-+..+.++.-..+.. +.|.|.+
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~ 82 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 82 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEecCC
Confidence 4679999998765 3344789999999999999998653334666666666554333221 3344433
Q ss_pred -CceEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 81 -GVQTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 81 -~~~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
..+...+.|.+.+|...|+.+++.+++..
T Consensus 83 ~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 83 EKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 33788999999999999999999998853
No 63
>KOG3531|consensus
Probab=97.49 E-value=1.8e-05 Score=87.04 Aligned_cols=93 Identities=20% Similarity=0.413 Sum_probs=82.2
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEeCceEEEEEe
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISNGVQTFHIKA 89 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t~~~~~~L~A 89 (538)
.++|||.++-....+|+|-|.|..+-+|++||+-.|. .+..+++|-|+.+.. .+++.|.+...+-+|+|+|
T Consensus 925 qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~--~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffra 1002 (1036)
T KOG3531|consen 925 QLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDS--EPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRA 1002 (1036)
T ss_pred hhhHHHHHHhhccccceeeeeeecceeeEeecccccc--cccccccccccccCCCCCCCCcchhheeeeehhhhHHHHhh
Confidence 5789999887777799999999999999999999987 888999999999742 2457899999999999999
Q ss_pred ccHHHHHHHHHHhHhhhhhhcc
Q psy3487 90 SNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 90 ~s~~e~~~Wi~al~~a~~~~~R 111 (538)
++.-...+|++.|+.+...+.|
T Consensus 1003 es~yt~~rw~evi~~a~~s~d~ 1024 (1036)
T KOG3531|consen 1003 ESYYTFERWMEVITDAPSSADR 1024 (1036)
T ss_pred hhhhhhhhHHHHhhcCCccCCC
Confidence 9999999999999988776666
No 64
>KOG1117|consensus
Probab=97.48 E-value=0.0001 Score=81.44 Aligned_cols=161 Identities=19% Similarity=0.223 Sum_probs=107.4
Q ss_pred CcccCcccCC---CCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee-cCCceEEE
Q psy3487 3 ALNTTDIKAS---HSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ-TEDSCTFI 77 (538)
Q Consensus 3 ~~~~~~~~~~---~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~-~~~~~~F~ 77 (538)
++||..++.+ ..++.+.|||.|... +..-.++||..+++..|.||.++++. .+.|.|++...... ....+.|+
T Consensus 71 ~~~~~~~~~~s~~isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~p--y~k~~i~va~is~v~~~gd~kfe 148 (1186)
T KOG1117|consen 71 APHMDGPPGSSTPISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKDP--YSKGPIPVAAISAVRNFGDNKFE 148 (1186)
T ss_pred ccccCCCCCCCCccCchhhcchhhccCcCcccccCccceecCCCCccccCCCCCC--CCCCceeeehhhhhhhccCceEE
Confidence 4555555443 456889999999765 44559999999999999999999987 66689998887754 35678999
Q ss_pred EEeCceEEEEEeccHHHHHHHHHHhHhhhhhhccccee----eceeeccccccccccCCCCCCCcccceeeeecC-----
Q psy3487 78 ISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALV----AAFSTSAYSTTAVRTGKPFNPLLGETYECDRTA----- 148 (538)
Q Consensus 78 i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~Rm~~v----~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~----- 148 (538)
+.++.++|.|+++++.++..|+..++.+.... |+... ...--.++---..-..|-|-.+.|+-.++.+..
T Consensus 149 vitn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q-~l~~ap~pp~pP~raG~lelrg~kak~f~~vsp~~vqL~knlq~f~l 227 (1186)
T KOG1117|consen 149 VITNQRTFVFRQESEGERFIWVSPLQSALKEQ-RLRSAPPPPVPPPRAGWLELRGFKAKLFVAVSPERVQLYKNLQSFPL 227 (1186)
T ss_pred EEecceEEEEecCCcccceeeechhhhcchhh-hhccCCCCCCCCCCccchhccccccceeEEecCceeeeecccccccC
Confidence 99999999999999999999999998774432 22110 111111111111113355666677766554321
Q ss_pred CCCeEEeeccccCCCcee
Q psy3487 149 DAGWKAFSEQVSHHPPIA 166 (538)
Q Consensus 149 ~~g~~~~~EQVSHHPPis 166 (538)
+-|..++-=||+.--|+.
T Consensus 228 gigit~I~m~~~nvk~vd 245 (1186)
T KOG1117|consen 228 GIGITFIYMEVSNVKEVD 245 (1186)
T ss_pred CceeEEEecccccccccc
Confidence 234455555555444444
No 65
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.32 E-value=0.0049 Score=52.92 Aligned_cols=90 Identities=12% Similarity=0.136 Sum_probs=68.7
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc--cCCceeEEEEccceeeecC-----C------ceEEEEEeCc-
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE--MSHTCRGTISLRGAIIQTE-----D------SCTFIISNGV- 82 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d--~~~~~~g~i~L~~~~i~~~-----~------~~~F~i~t~~- 82 (538)
.++|-|.+.+.....=+.|+|-|=|+.|-|.|...- ....-+|.|.|..+.|... . .+.|.|....
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~ 82 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSEST 82 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCC
Confidence 578999987743222346899899999999995421 1256789999999998531 1 4788887765
Q ss_pred -eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 83 -QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 83 -~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
+.|.|.|.++++.+.|++++....
T Consensus 83 ~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 83 DEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred CeEEEEEECCHHHHHHHHHHHHHhh
Confidence 789999999999999999998643
No 66
>KOG3723|consensus
Probab=97.31 E-value=7.5e-05 Score=79.19 Aligned_cols=94 Identities=21% Similarity=0.366 Sum_probs=70.6
Q ss_pred CCCCcceEEEEE-eEcC--CCCCceEEEEEEeCCEEEEEecc--cccCCceeEEEEccceeee---c------CCceEEE
Q psy3487 12 SHSDAEMKGWLF-KWTN--YLKGYQKRWFVLSNGLLSYYRNQ--AEMSHTCRGTISLRGAIIQ---T------EDSCTFI 77 (538)
Q Consensus 12 ~~~~~~~~G~L~-K~~~--~~k~Wk~RwFvL~~~~L~Yyk~~--~d~~~~~~g~i~L~~~~i~---~------~~~~~F~ 77 (538)
..+.|.+||-|+ |+|. .+|+|+.|||.|.+-.|.|-+.. +|.... .|+|..+.-. . +-+-.|+
T Consensus 731 ~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~~---~IDl~~IRSVk~v~~kr~~rslpKAFE 807 (851)
T KOG3723|consen 731 QDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDDC---PIDLSKIRSVKAVAKKRRDRSLPKAFE 807 (851)
T ss_pred CCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCCC---CccHHHhhhHHHHHhhhhhcccchhhh
Confidence 456779999999 5554 77999999999999999996643 333222 4555554421 1 1245799
Q ss_pred EEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 78 ISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 78 i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|-+-.++|.|+|.++...++|++.|+-+..-
T Consensus 808 IFTAD~T~ILKaKDeKNAEEWlqCL~IavAH 838 (851)
T KOG3723|consen 808 IFTADKTYILKAKDEKNAEEWLQCLNIAVAH 838 (851)
T ss_pred eeecCceEEeecccccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998866443
No 67
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.23 E-value=0.0039 Score=55.20 Aligned_cols=88 Identities=17% Similarity=0.323 Sum_probs=63.5
Q ss_pred eEEEEEeEcCCC-----CCceEEEEEEeC--CEEEEEeccccc---CCceeEEEEccceeeec-C-----------CceE
Q psy3487 18 MKGWLFKWTNYL-----KGYQKRWFVLSN--GLLSYYRNQAEM---SHTCRGTISLRGAIIQT-E-----------DSCT 75 (538)
Q Consensus 18 ~~G~L~K~~~~~-----k~Wk~RwFvL~~--~~L~Yyk~~~d~---~~~~~g~i~L~~~~i~~-~-----------~~~~ 75 (538)
.-.||+|.+... ....+|||-|+. .+|+|....... ...-.+.+.|..+.... . ...+
T Consensus 11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~s 90 (123)
T PF12814_consen 11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKS 90 (123)
T ss_pred cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceE
Confidence 446999987654 679999999984 788887754211 11112456676665321 1 1356
Q ss_pred EEEEeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 76 FIISNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 76 F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
|.|.++.|+..|.|.+.++++.|+++|+.-
T Consensus 91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~L 120 (123)
T PF12814_consen 91 IIIVTPDRSLDLTAPSRERHEIWFNALRYL 120 (123)
T ss_pred EEEEcCCeEEEEEeCCHHHHHHHHHHHHHH
Confidence 788999999999999999999999999864
No 68
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.23 E-value=0.00068 Score=57.37 Aligned_cols=61 Identities=25% Similarity=0.411 Sum_probs=51.5
Q ss_pred CCEEEEEecccccCCceeEEEEcccee-eecCCceEEEEEeCceEEEEEeccHHHHHHHHHHhH
Q psy3487 41 NGLLSYYRNQAEMSHTCRGTISLRGAI-IQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALE 103 (538)
Q Consensus 41 ~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~~~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~ 103 (538)
.|.|+|-| .+| +..|-|.|+|..+. +.++..+.|.+...+....|+|.+..||+.|+.+|+
T Consensus 49 KGLLF~~K-~~d-ka~P~GiinLadase~~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 49 KGLLFFSK-AED-KASPSGIINLADASEPEKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred ceEEEEec-ccc-ccCCcceEehhhccccccCCCceEEEEeCCceeeeecCCHHHhccHHHHhh
Confidence 37788888 333 34899999998776 667778999998899999999999999999999986
No 69
>KOG3751|consensus
Probab=97.22 E-value=0.00048 Score=72.79 Aligned_cols=93 Identities=26% Similarity=0.360 Sum_probs=66.0
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEE---ccceeee----------cCCceEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTIS---LRGAIIQ----------TEDSCTFII 78 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~---L~~~~i~----------~~~~~~F~i 78 (538)
+...|+++|+|+-+....|+|||-||||+..-|||+...... ++|..-- +.+-.|- ...+++|.|
T Consensus 313 s~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk--~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~ 390 (622)
T KOG3751|consen 313 SSSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSK--EPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCI 390 (622)
T ss_pred cCCCccccceeeecccccccceeEEEEEecCcceEccCCCCC--CchhhHHHHhcccCceEEeecchhccCCCCCceEEe
Confidence 367799999999999999999999999999999998766433 3332211 1122221 123567766
Q ss_pred EeCc-----e-EEEEEeccHHHHHHHHHHhHhhh
Q psy3487 79 SNGV-----Q-TFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 79 ~t~~-----~-~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.... + --.|+|+++..+..|+.||+.++
T Consensus 391 K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~K 424 (622)
T KOG3751|consen 391 KPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLK 424 (622)
T ss_pred eeccccCcccceeeeecccchhHHHHHHHHHHHH
Confidence 5443 2 33789999999999999998654
No 70
>PLN02866 phospholipase D
Probab=97.21 E-value=0.0025 Score=73.52 Aligned_cols=92 Identities=16% Similarity=0.286 Sum_probs=69.7
Q ss_pred CCCcceEEEEEeEc-----C------C---------CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccc-------
Q psy3487 13 HSDAEMKGWLFKWT-----N------Y---------LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRG------- 65 (538)
Q Consensus 13 ~~~~~~~G~L~K~~-----~------~---------~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~------- 65 (538)
-++-.+|||+.|+. + . ..+|+||||||+++.|.|.+++.+. .++-.|-+..
T Consensus 179 ~g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~--~~~~v~lfD~~~~~~~~ 256 (1068)
T PLN02866 179 YGPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDA--KPLDIIVFDVLPASNGN 256 (1068)
T ss_pred cCCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCC--ceeEEEEEecccccccC
Confidence 35677999999982 1 1 1359999999999999999888765 4555554431
Q ss_pred ----eeeec------CCceEEEEEeCceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 66 ----AIIQT------EDSCTFIISNGVQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 66 ----~~i~~------~~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
..+.. .-.+.|.|.+++++..|+|.+..+...|+.+|+.+.
T Consensus 257 ~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~ 307 (1068)
T PLN02866 257 GEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAG 307 (1068)
T ss_pred CCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHH
Confidence 11111 124688999999999999999999999999999876
No 71
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.20 E-value=0.001 Score=72.70 Aligned_cols=91 Identities=19% Similarity=0.366 Sum_probs=62.5
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEec-ccccCC---ceeEEEEccceeee-----cCCceEEEEEe-Cce
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRN-QAEMSH---TCRGTISLRGAIIQ-----TEDSCTFIISN-GVQ 83 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~-~~d~~~---~~~g~i~L~~~~i~-----~~~~~~F~i~t-~~~ 83 (538)
..+...|||.|.+...+ |++|||.+.++.+..... ..+... .+.....+..+... +..+++|.|.+ ..+
T Consensus 375 sDv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~ 453 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQ 453 (478)
T ss_pred CCcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecCCc
Confidence 45678999999988775 999999998766654432 222111 21222223444422 23578898866 457
Q ss_pred EEEEEeccHHHHHHHHHHhHhh
Q psy3487 84 TFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a 105 (538)
.+++.|+++.|+++|+.+|+.+
T Consensus 454 ~~~~~~~~~~~~~~W~~~~~~~ 475 (478)
T PTZ00267 454 KIIAYAKTAEDRDQWISKFQRA 475 (478)
T ss_pred EEEEecCChHHHHHHHHHHHHH
Confidence 8889999999999999999976
No 72
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.16 E-value=0.007 Score=51.17 Aligned_cols=86 Identities=15% Similarity=0.232 Sum_probs=68.2
Q ss_pred CcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec---CCceEEEEEeCc---eEEEEE
Q psy3487 15 DAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT---EDSCTFIISNGV---QTFHIK 88 (538)
Q Consensus 15 ~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~---~~~~L~ 88 (538)
...++|.|.-.+. -+.|++-|=+..|-|.|..++ ....+..|.++...|.. .++++|.|.+.. +.|.|+
T Consensus 3 eLlleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~-~y~~K~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~ 77 (97)
T cd01222 3 DLLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD-KYQFKAYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLT 77 (97)
T ss_pred ceeeeceEEeecC----CCceEEEEecccEEEEEecCC-eeEEEEEEEecceEEecCCCCCCcEEEEEecCCCceEEEEE
Confidence 4567888875443 345887788888999887765 36778899999888754 468999886654 699999
Q ss_pred eccHHHHHHHHHHhHhh
Q psy3487 89 ASNEVERQRWVTALELA 105 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a 105 (538)
|.|+++++.|+.+|+.+
T Consensus 78 A~s~e~K~~W~~~i~~~ 94 (97)
T cd01222 78 ARNREEKRIWTQQLKRA 94 (97)
T ss_pred ecCHHHHHHHHHHHHHH
Confidence 99999999999999865
No 73
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.33 E-value=0.027 Score=48.26 Aligned_cols=78 Identities=21% Similarity=0.311 Sum_probs=61.6
Q ss_pred CCCCceEEEEEEeCCEEEEEeccc-ccCCceeEEEEccceeeec-----CCceEEEEEeCc-eEEEEEeccHHHHHHHHH
Q psy3487 28 YLKGYQKRWFVLSNGLLSYYRNQA-EMSHTCRGTISLRGAIIQT-----EDSCTFIISNGV-QTFHIKASNEVERQRWVT 100 (538)
Q Consensus 28 ~~k~Wk~RwFvL~~~~L~Yyk~~~-d~~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~ 100 (538)
..+-=..||++|=+.+|....... -....-.|.++|++..|.. ..++.|+|..+. ....+.|.+..|.++|+.
T Consensus 24 ~~qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~ 103 (111)
T cd01225 24 AGEEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVE 103 (111)
T ss_pred CccccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEEechHhccCccceEEEeccCcCcEEEEeCCHHHHHHHHH
Confidence 444567899999998888777543 2345668999999999863 235899998776 788889999999999999
Q ss_pred HhHhh
Q psy3487 101 ALELA 105 (538)
Q Consensus 101 al~~a 105 (538)
.|+..
T Consensus 104 hL~~~ 108 (111)
T cd01225 104 LLNAN 108 (111)
T ss_pred HHHhh
Confidence 99853
No 74
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.29 E-value=0.035 Score=48.99 Aligned_cols=72 Identities=17% Similarity=0.332 Sum_probs=51.6
Q ss_pred ceEEEEEEeCCEEEEEecccccCCce-----eEEEEccceeeec----------CCceEEEEE------eCceEEEEEec
Q psy3487 32 YQKRWFVLSNGLLSYYRNQAEMSHTC-----RGTISLRGAIIQT----------EDSCTFIIS------NGVQTFHIKAS 90 (538)
Q Consensus 32 Wk~RwFvL~~~~L~Yyk~~~d~~~~~-----~g~i~L~~~~i~~----------~~~~~F~i~------t~~~~~~L~A~ 90 (538)
-+.+|+-|=++.|-|-|...+....+ +..+.+..+.... ..++.|.|. .....+.|+|+
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~ 106 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD 106 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence 55689999899999988665443333 5556555544321 346788874 22378999999
Q ss_pred cHHHHHHHHHHhH
Q psy3487 91 NEVERQRWVTALE 103 (538)
Q Consensus 91 s~~e~~~Wi~al~ 103 (538)
++.|+.+||+|+.
T Consensus 107 S~sdr~rWi~Al~ 119 (125)
T cd01221 107 SQSDRERWLSALA 119 (125)
T ss_pred CHHHHHHHHHhcC
Confidence 9999999999985
No 75
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.28 E-value=0.044 Score=46.38 Aligned_cols=70 Identities=17% Similarity=0.143 Sum_probs=52.6
Q ss_pred EEEEeCCEEEEEecccccCCceeEEEEccceeee--cC---CceEEEEEeCceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 36 WFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ--TE---DSCTFIISNGVQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 36 wFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~--~~---~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.|.++| +|-|-.-...........++|....|. ++ -++.|.|.++.+++.++|+++.+..+|++.|+.++
T Consensus 24 ~FLfND-~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 24 LFLLND-RLIVGNINAAGKYVMESTYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAK 98 (100)
T ss_pred EEEecc-EEEEEEecccceEEEEEEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHh
Confidence 555555 444443221234566788999998873 22 36899999999999999999999999999999886
No 76
>KOG3543|consensus
Probab=95.92 E-value=0.0014 Score=70.44 Aligned_cols=90 Identities=24% Similarity=0.390 Sum_probs=66.4
Q ss_pred CCCcceEEEEEeEcC-CCCCceEEEEEEeCC-----EEEEEecccccCCceeEEEEccceeeecCCc--------eEEEE
Q psy3487 13 HSDAEMKGWLFKWTN-YLKGYQKRWFVLSNG-----LLSYYRNQAEMSHTCRGTISLRGAIIQTEDS--------CTFII 78 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~-----~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~~~--------~~F~i 78 (538)
++....+|||+--|. ..|.||+|||||-.- .++-|+.. +.+|...|.|.|++|+-.++ .-|.-
T Consensus 461 p~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrek---kaepqel~qldgytvdytdp~pglqgg~~ffna 537 (1218)
T KOG3543|consen 461 PPNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREK---KAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNA 537 (1218)
T ss_pred CCccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhc---ccChHHHhhccCeeeccCCCCCccccchHHHHH
Confidence 344567899998765 779999999999642 22233333 45788899999999963222 33555
Q ss_pred EeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 79 SNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 79 ~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
...+.+..|..+++.|+.-|++++-.|
T Consensus 538 vkegdtvifasddeqdr~lwvqamyra 564 (1218)
T KOG3543|consen 538 VKEGDTVIFASDDEQDRHLWVQAMYRA 564 (1218)
T ss_pred hccCceEEeccCchhhhhHHHHHHHHh
Confidence 666688999999999999999998755
No 77
>PF15404 PH_4: Pleckstrin homology domain
Probab=95.89 E-value=0.067 Score=50.53 Aligned_cols=51 Identities=24% Similarity=0.367 Sum_probs=39.7
Q ss_pred eEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc---------cCCceeEEEEccceee
Q psy3487 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE---------MSHTCRGTISLRGAII 68 (538)
Q Consensus 18 ~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d---------~~~~~~g~i~L~~~~i 68 (538)
++|+|..+...-..|+++|+||..|.|.-|+.-.. ......-+|+|.+|-|
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYv 60 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYV 60 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceE
Confidence 57999988887788999999999999998886321 1123456889998876
No 78
>KOG4424|consensus
Probab=95.45 E-value=0.021 Score=61.46 Aligned_cols=105 Identities=26% Similarity=0.346 Sum_probs=82.7
Q ss_pred CcccCCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc---cCCceeEEEEccceeeec----CCceEEEEE
Q psy3487 7 TDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE---MSHTCRGTISLRGAIIQT----EDSCTFIIS 79 (538)
Q Consensus 7 ~~~~~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d---~~~~~~g~i~L~~~~i~~----~~~~~F~i~ 79 (538)
.+........++||-|.|.+......+.||+.|=+..|.|.+-... ....++-.+.+.++.+.. +.++.|.+.
T Consensus 263 ~dIV~PsreLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~~~~~~~tF~~~ 342 (623)
T KOG4424|consen 263 EDIVSPSRELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDDNEELPHTFILT 342 (623)
T ss_pred ccccCcHHHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcccccccCCceEEEe
Confidence 3344445668999999999988888999999998888888875531 124556667777776643 346899999
Q ss_pred eCceEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 80 NGVQTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 80 t~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
-..+...|.|.+..+..+|+++|+.+++....
T Consensus 343 G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq 374 (623)
T KOG4424|consen 343 GKKRGVELQARTEQEKKEWVQAIQDAIDKHKQ 374 (623)
T ss_pred cccceEEeecCchhhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999887543
No 79
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.20 E-value=0.061 Score=59.10 Aligned_cols=92 Identities=12% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCce---------------eEEE--Ecc---ceeee----
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTC---------------RGTI--SLR---GAIIQ---- 69 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~---------------~g~i--~L~---~~~i~---- 69 (538)
+....+|.+.|++.... |++||+.+++..+--.....+..... .-.| ++. .+.-.
T Consensus 371 ~~~~~~g~~~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (496)
T PTZ00283 371 GLTLYEGIVKKQSSDLS-WKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKY 449 (496)
T ss_pred CceeeeeEEecccCCcc-cceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHh
Confidence 44577899998876554 99999999732211111111110000 0011 111 22111
Q ss_pred --cCCceEEEEEe-CceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 70 --TEDSCTFIISN-GVQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 70 --~~~~~~F~i~t-~~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.+.++.|.+.. +++.+.|+|.++.|++.||.+|+.+.
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (496)
T PTZ00283 450 TGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVL 489 (496)
T ss_pred hCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhc
Confidence 13578998865 45999999999999999999999763
No 80
>KOG0932|consensus
Probab=95.05 E-value=0.0093 Score=63.73 Aligned_cols=92 Identities=16% Similarity=0.316 Sum_probs=63.9
Q ss_pred CCcceEEEEEeEcC----------CCCCceEEEEEEeCCEEEEEecccccCC-----ceeEEEEccceeee-----cCCc
Q psy3487 14 SDAEMKGWLFKWTN----------YLKGYQKRWFVLSNGLLSYYRNQAEMSH-----TCRGTISLRGAIIQ-----TEDS 73 (538)
Q Consensus 14 ~~~~~~G~L~K~~~----------~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~-----~~~g~i~L~~~~i~-----~~~~ 73 (538)
....+.|+|.++-. ...+||.-|-||++-.||+-|++-.... .....|.+..+-.. ..++
T Consensus 504 a~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lknavsvHHALAt~AtdY~KKp 583 (774)
T KOG0932|consen 504 AATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLKNAVSVHHALATPATDYSKKP 583 (774)
T ss_pred chhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhhhhhhhhhhhcCCCcccccCC
Confidence 34567899986521 5567999999999999998886532110 11122222222221 1357
Q ss_pred eEEEEEeCc-eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 74 CTFIISNGV-QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 74 ~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
+.|.+.+-. ++|.|+|.+..|++.||..|+.+
T Consensus 584 ~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~v 616 (774)
T KOG0932|consen 584 HVFKLRTADWRVFLFQAPSQEEMQSWIERINLV 616 (774)
T ss_pred ceEEEEeccceeEEEeCCCHHHHHHHHHHHHHH
Confidence 899998866 99999999999999999999855
No 81
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.93 E-value=0.48 Score=41.29 Aligned_cols=92 Identities=16% Similarity=0.319 Sum_probs=60.6
Q ss_pred CCcceEEEEEeEcCC----CCCceEEEEEEeCCEEEEEecccccC------CceeEEEEccceeeec---CCceEEEEEe
Q psy3487 14 SDAEMKGWLFKWTNY----LKGYQKRWFVLSNGLLSYYRNQAEMS------HTCRGTISLRGAIIQT---EDSCTFIISN 80 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~----~k~Wk~RwFvL~~~~L~Yyk~~~d~~------~~~~g~i~L~~~~i~~---~~~~~F~i~t 80 (538)
+.+.+.|-+.=+... .|.=.||-| |=+..|-|.+-..+.. ..-+..|.++...+.+ +++++|.|-.
T Consensus 3 G~Ll~Q~~f~v~~~~~~~~~K~~eR~vF-LFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v~gd~~kF~i~~ 81 (114)
T cd01232 3 GKLLLQDTFQVWDPKAGLIQKGRERRVF-LFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHVEGDPCRFALWS 81 (114)
T ss_pred CceEEEccEEEEeCCccccCCCceeEEE-EeeceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEccCCCCceEEEEe
Confidence 445566665555442 244445555 5566666666543221 2235778888777643 5789998854
Q ss_pred Cc-----eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 81 GV-----QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 81 ~~-----~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.. .+|.++|.|..+.+.|+..|+...
T Consensus 82 ~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il 112 (114)
T cd01232 82 GDPPISDNRIILKANSQETKQEWVKKIREIL 112 (114)
T ss_pred CCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 33 699999999999999999998653
No 82
>KOG0705|consensus
Probab=94.65 E-value=0.011 Score=63.44 Aligned_cols=40 Identities=28% Similarity=0.481 Sum_probs=33.1
Q ss_pred CCCCcceEEEEEeEcC-CC-CCceEEEEEEe-CCEEEEEeccc
Q psy3487 12 SHSDAEMKGWLFKWTN-YL-KGYQKRWFVLS-NGLLSYYRNQA 51 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~-~~-k~Wk~RwFvL~-~~~L~Yyk~~~ 51 (538)
....|+++|.|.|+.+ .+ |.||+.|+.|. +|.|.||-+=.
T Consensus 298 GRAIPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~ 340 (749)
T KOG0705|consen 298 GRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLG 340 (749)
T ss_pred CcccchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHH
Confidence 4567899999999876 44 89999999996 79999997543
No 83
>KOG1117|consensus
Probab=94.55 E-value=0.062 Score=60.28 Aligned_cols=93 Identities=19% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCC-ceeEEEEccceeeecCCceEEEEEeCceEEEEEec
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSH-TCRGTISLRGAIIQTEDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~-~~~g~i~L~~~~i~~~~~~~F~i~t~~~~~~L~A~ 90 (538)
.+.+|...|||.-+|...| -|.+|.++.+..||+.++-.. --+--|.+..+.|.+.+.+.|.+.++-+.|-|.|+
T Consensus 188 pp~pP~raG~lelrg~kak----~f~~vsp~~vqL~knlq~f~lgigit~I~m~~~nvk~vdr~sfdl~Tp~r~fsftae 263 (1186)
T KOG1117|consen 188 PPVPPPRAGWLELRGFKAK----LFVAVSPERVQLYKNLQSFPLGIGITFIYMEVSNVKEVDRRSFDLNTPYREFSFTAE 263 (1186)
T ss_pred CCCCCCCccchhccccccc----eeEEecCceeeeecccccccCCceeEEEecccccccccccceeccCCceeeeeeeec
Confidence 4556899999998874432 466778999999999976532 22446788888888777799999999999999999
Q ss_pred cHHHHHHHHHHhHhhhhh
Q psy3487 91 NEVERQRWVTALELAKSK 108 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~~~ 108 (538)
++.+++.|+.+++.++..
T Consensus 264 se~erq~w~ea~q~siAe 281 (1186)
T KOG1117|consen 264 SETERQIWGEAPQPSIAE 281 (1186)
T ss_pred cchhhhhhhhccCccccc
Confidence 999999999999877553
No 84
>KOG1451|consensus
Probab=94.34 E-value=0.081 Score=57.09 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=67.4
Q ss_pred CCCCcceEEEEEeEcC--CCCCceEEEEEEeC-CEEEE---EecccccCCceeEEEEccceeeec----CCceEEEEEeC
Q psy3487 12 SHSDAEMKGWLFKWTN--YLKGYQKRWFVLSN-GLLSY---YRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNG 81 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~--~~k~Wk~RwFvL~~-~~L~Y---yk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~ 81 (538)
.+.++.++|||+-|-+ ..+.|.+.||+-.. ....- +......+..+..++.|..|.-.+ +..+||.|...
T Consensus 261 ~p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~ 340 (812)
T KOG1451|consen 261 RPTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSRRKTDSIDKRFCFDVEVE 340 (812)
T ss_pred CCCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhccCcccccccceeeeeeec
Confidence 4678899999997643 66789999999963 32221 222222233455677888887533 45689988776
Q ss_pred c--eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 82 V--QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 82 ~--~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
. -+..++|-++.++..||+|+..+
T Consensus 341 erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 341 ERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred ccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 5 58999999999999999998754
No 85
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.07 E-value=0.3 Score=40.69 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=58.7
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecc-----cccCCceeEEEEccceeeecCCceEEEE-EeCceEEEEEe
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQ-----AEMSHTCRGTISLRGAIIQTEDSCTFII-SNGVQTFHIKA 89 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~-----~d~~~~~~g~i~L~~~~i~~~~~~~F~i-~t~~~~~~L~A 89 (538)
...+|.|.|-.... =|.|=|-|=+..|-|-+-. .....++.--|+|....+.+.. |.+ .+++++|.+-|
T Consensus 3 Lv~eg~lvel~~~~--rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~---~~~~~~~~KSf~~~a 77 (96)
T cd01228 3 LVKDSFLVELVEGS--RKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEP---FRIHNKNGKSYTFLL 77 (96)
T ss_pred ccccceeeeehhCC--CcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecchh---hhccccCCceEEEEe
Confidence 45688888876322 3455555656666655422 1133567788999998875432 544 44679999999
Q ss_pred ccHHHHHHHHHHhHhh
Q psy3487 90 SNEVERQRWVTALELA 105 (538)
Q Consensus 90 ~s~~e~~~Wi~al~~a 105 (538)
+|..|+.+|+.+|+.-
T Consensus 78 sS~~Er~eW~~hI~~~ 93 (96)
T cd01228 78 SSDYERSEWRESIQKL 93 (96)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 9999999999999754
No 86
>KOG3727|consensus
Probab=93.98 E-value=0.0049 Score=65.82 Aligned_cols=94 Identities=22% Similarity=0.399 Sum_probs=65.2
Q ss_pred CCcceEEEEEe---EcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecCCc------eEEEEE---eC
Q psy3487 14 SDAEMKGWLFK---WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS------CTFIIS---NG 81 (538)
Q Consensus 14 ~~~~~~G~L~K---~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~~~------~~F~i~---t~ 81 (538)
..|+..-|+.- +.-..|+++|-||..++-.+.+|++..+....|.+.|++.+|++.++-+ ..|.|. .+
T Consensus 354 ~ipel~dy~~~~kpk~~~~Kg~kr~f~t~~dl~~~~~~s~~~s~~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~ 433 (664)
T KOG3727|consen 354 RIPELADYLKYLKPKKLTLKGYKRYFFTFRDLHLSLYKSSEDSRGAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEG 433 (664)
T ss_pred cCCcccchhhhhchhhhhhhhhhhHHHHHHHHHHHHHhhHhhhcCCCCCchhhcCcccCCccccccccceEEEEeecCCc
Confidence 34555566551 1113778888888877766666666655555788899999999865421 334332 23
Q ss_pred ceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 82 VQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 82 ~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
...++|+|+++.++.+||.+.+.|..
T Consensus 434 msEi~LRCd~E~QYA~WMAaCrLASK 459 (664)
T KOG3727|consen 434 MSEIWLRCDNEQQYARWMAACRLASK 459 (664)
T ss_pred cceeEEecCCHHHHHHHHHHhhHhhc
Confidence 48899999999999999999987743
No 87
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.97 E-value=0.71 Score=40.16 Aligned_cols=94 Identities=17% Similarity=0.185 Sum_probs=65.4
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc----CCceeEEEEccceeeecC-----------CceEEEE
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM----SHTCRGTISLRGAIIQTE-----------DSCTFII 78 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----~~~~~g~i~L~~~~i~~~-----------~~~~F~i 78 (538)
+.|...|.|.=....-+.=+.||.-|=|..|-..|...+. ...-+..+.|..+.|... -.+.|.|
T Consensus 2 GR~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L 81 (116)
T cd01223 2 GRPLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYL 81 (116)
T ss_pred CccccCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEE
Confidence 3466778877555433345689988888888888866543 133455666777665321 1256777
Q ss_pred EeCc--eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 79 SNGV--QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 79 ~t~~--~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.... ..|.|-|.+++++..|+.++..|.+
T Consensus 82 ~~~~~~~~~~f~~Ktee~K~kWm~al~~a~s 112 (116)
T cd01223 82 AHKQGKTGFTFYFKTEHLRKKWLKALEMAMS 112 (116)
T ss_pred EecCCCccEEEEeCCHHHHHHHHHHHHHHHh
Confidence 6544 7899999999999999999998754
No 88
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=92.32 E-value=0.65 Score=39.12 Aligned_cols=77 Identities=14% Similarity=0.255 Sum_probs=51.2
Q ss_pred CCCCceEEEEEEe----CCEEEEEecccccCCceeEEEEcccee-e-------ecCCceEEEEEeC-ceEEEEEeccHHH
Q psy3487 28 YLKGYQKRWFVLS----NGLLSYYRNQAEMSHTCRGTISLRGAI-I-------QTEDSCTFIISNG-VQTFHIKASNEVE 94 (538)
Q Consensus 28 ~~k~Wk~RwFvL~----~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i-------~~~~~~~F~i~t~-~~~~~L~A~s~~e 94 (538)
....|++--.+|. +..|.+|-......++|+-.|+...+. | .|+..+.|.|... +..|.|.|.|+++
T Consensus 17 ~~~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~q 96 (107)
T cd01231 17 SGARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQQ 96 (107)
T ss_pred CccccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCHHH
Confidence 3446988777775 245555554211234565555443322 1 3567899998764 4799999999999
Q ss_pred HHHHHHHhHh
Q psy3487 95 RQRWVTALEL 104 (538)
Q Consensus 95 ~~~Wi~al~~ 104 (538)
++.|+..|+.
T Consensus 97 ~~SWla~Ir~ 106 (107)
T cd01231 97 LNSWLAELRY 106 (107)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 89
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.29 E-value=1.3 Score=38.42 Aligned_cols=77 Identities=21% Similarity=0.416 Sum_probs=50.2
Q ss_pred EEEeEcCCCCCc-eEEEEEEe--CCEEEEEecccccCCceeEEEEcccee-e---------------e---cCCceEEEE
Q psy3487 21 WLFKWTNYLKGY-QKRWFVLS--NGLLSYYRNQAEMSHTCRGTISLRGAI-I---------------Q---TEDSCTFII 78 (538)
Q Consensus 21 ~L~K~~~~~k~W-k~RwFvL~--~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i---------------~---~~~~~~F~i 78 (538)
.|.|... +++ ++|.|.|+ ++.|+|..+.+ . ..+.|+|..+. | . ...+.+|.|
T Consensus 11 ~~~K~~~--~~~~~~~~f~ld~~~~~l~W~~~~~-~---~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTI 84 (115)
T cd01248 11 VFIKWDD--TSRERRRLFRLDEKGFFLYWKDEGK-K---EKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTI 84 (115)
T ss_pred EEEEEcC--CCceeeEEEEEcCCCcEEEEeCCCC-c---cccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEE
Confidence 3557666 445 45778896 45555554332 1 22467776544 2 0 133478887
Q ss_pred EeCc----eEEEEEeccHHHHHHHHHHhH
Q psy3487 79 SNGV----QTFHIKASNEVERQRWVTALE 103 (538)
Q Consensus 79 ~t~~----~~~~L~A~s~~e~~~Wi~al~ 103 (538)
..+. +..+|-|++..+++.|+..|.
T Consensus 85 iy~~~~~~k~L~lVA~s~~~a~~W~~gL~ 113 (115)
T cd01248 85 VYGTDLNLKSLDLVAPSEEEAKTWVSGLR 113 (115)
T ss_pred EECCCCCeeEEEEEECCHHHHHHHHHHHh
Confidence 6654 589999999999999999886
No 90
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=92.01 E-value=2.1 Score=38.28 Aligned_cols=75 Identities=15% Similarity=0.279 Sum_probs=52.8
Q ss_pred eEEEEEEeCCEEEEEeccccc-------CCceeEEEEccceeeec---CCceEEEEEeCc--eEEEEEeccHHHHHHHHH
Q psy3487 33 QKRWFVLSNGLLSYYRNQAEM-------SHTCRGTISLRGAIIQT---EDSCTFIISNGV--QTFHIKASNEVERQRWVT 100 (538)
Q Consensus 33 k~RwFvL~~~~L~Yyk~~~d~-------~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~--~~~~L~A~s~~e~~~Wi~ 100 (538)
+.|.+=|=+..+-+.|-..+. ...-+..|.+....+.+ +++++|+|-+.. .+|.|+|.|+..++.|+.
T Consensus 30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~ 109 (133)
T cd01227 30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVN 109 (133)
T ss_pred ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHH
Confidence 346655666666677655322 12336677777766643 467899886654 799999999999999999
Q ss_pred HhHhhhh
Q psy3487 101 ALELAKS 107 (538)
Q Consensus 101 al~~a~~ 107 (538)
.|...-.
T Consensus 110 ~I~~iL~ 116 (133)
T cd01227 110 EIRKVLT 116 (133)
T ss_pred HHHHHHH
Confidence 9886533
No 91
>KOG0248|consensus
Probab=90.70 E-value=0.074 Score=58.34 Aligned_cols=87 Identities=10% Similarity=-0.130 Sum_probs=64.3
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccc-eeee-cCCceEEEEEeCceEEEEEeccHH
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRG-AIIQ-TEDSCTFIISNGVQTFHIKASNEV 93 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~-~~i~-~~~~~~F~i~t~~~~~~L~A~s~~ 93 (538)
+...|+|+|+...+|.||.|||++.++.+.||+++.|. +.+.+-+.+ |.+. ......-.+.....++.+-++...
T Consensus 259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~---~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~ 335 (936)
T KOG0248|consen 259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDI---RSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVT 335 (936)
T ss_pred hHHHHHHHhHheeeccceEEEEEcCCCccccccCcccc---cccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHH
Confidence 47789999998899999999999999999999999865 334555553 4332 111222233334467889999999
Q ss_pred HHHHHHHHhHhh
Q psy3487 94 ERQRWVTALELA 105 (538)
Q Consensus 94 e~~~Wi~al~~a 105 (538)
-.+.||.+.+..
T Consensus 336 iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 336 ILSAAIKATTLR 347 (936)
T ss_pred HHHHHHHHHhcc
Confidence 999999988754
No 92
>KOG4807|consensus
Probab=90.67 E-value=0.0048 Score=63.06 Aligned_cols=82 Identities=26% Similarity=0.476 Sum_probs=67.0
Q ss_pred CCCCCceEEEEEEeCCEEEEEeccc-ccCCceeEEEEccceee----ecCCceEEEEEeCceEEEEEeccHHHHHHHHHH
Q psy3487 27 NYLKGYQKRWFVLSNGLLSYYRNQA-EMSHTCRGTISLRGAII----QTEDSCTFIISNGVQTFHIKASNEVERQRWVTA 101 (538)
Q Consensus 27 ~~~k~Wk~RwFvL~~~~L~Yyk~~~-d~~~~~~g~i~L~~~~i----~~~~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~a 101 (538)
.....|++.||||.+..|-||.++. +.....-|.|+|..|.- .....+.|.|.+.+..|.|.|.+..-+..|+.+
T Consensus 30 ~~t~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A 109 (593)
T KOG4807|consen 30 TSTSQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEA 109 (593)
T ss_pred cchHHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHHHhccceeecccchhhhhHHHHHHHHHHHHHH
Confidence 3455699999999999999999774 22234568999999982 335689999999999999999999999999999
Q ss_pred hHhhhhh
Q psy3487 102 LELAKSK 108 (538)
Q Consensus 102 l~~a~~~ 108 (538)
+.....+
T Consensus 110 ~~kT~~P 116 (593)
T KOG4807|consen 110 LRKTVRP 116 (593)
T ss_pred HHhccCC
Confidence 9865444
No 93
>PF15408 PH_7: Pleckstrin homology domain
Probab=88.65 E-value=0.26 Score=40.06 Aligned_cols=85 Identities=14% Similarity=0.330 Sum_probs=55.4
Q ss_pred EEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee----------cC-CceEE--EEEeCc-eE
Q psy3487 19 KGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ----------TE-DSCTF--IISNGV-QT 84 (538)
Q Consensus 19 ~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~----------~~-~~~~F--~i~t~~-~~ 84 (538)
||||..--... -+|||.+|++..|.+|.++... -.-++.|+...+. ++ .-..| -...++ +.
T Consensus 1 EGYLY~~E~~s--i~rRF~~L~~K~~~~~~~KGG~---~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~ 75 (104)
T PF15408_consen 1 EGYLYRDEDSS--IQRRFVMLRSKQFNMYEDKGGQ---YLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRH 75 (104)
T ss_pred CCeEEEeccch--HHHHHHhhhhceeEEecccCCc---eeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcch
Confidence 58888754433 6899999999999999888643 2335555544331 11 11234 334443 45
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
..+=|++..-++.|+++++.-...
T Consensus 76 ~~~FA~S~~~~~~Wi~~mN~~s~~ 99 (104)
T PF15408_consen 76 VQCFASSKKVCQSWIQVMNSPSFR 99 (104)
T ss_pred hhhhhhHHHHHHHHHHHhcChhhh
Confidence 556689999999999999864433
No 94
>KOG3551|consensus
Probab=88.37 E-value=0.66 Score=48.00 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=87.5
Q ss_pred CcceEEEEEeEc--CCCCCceEEEEEEeCCEEEEEeccc---ccCCceeEEEEccceeeec----------CCceEEEEE
Q psy3487 15 DAEMKGWLFKWT--NYLKGYQKRWFVLSNGLLSYYRNQA---EMSHTCRGTISLRGAIIQT----------EDSCTFIIS 79 (538)
Q Consensus 15 ~~~~~G~L~K~~--~~~k~Wk~RwFvL~~~~L~Yyk~~~---d~~~~~~g~i~L~~~~i~~----------~~~~~F~i~ 79 (538)
.+..-|||.+|- +..+.|+.-+.+|.+.-|..|.+-. ++=+.|+-+.+|-...+.- .....|.+.
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 556679999874 4677899999999988888888764 2335677777776555421 123589988
Q ss_pred eCc----eEEEEEeccHHHHHHHHHHhHhhhhhhcc-cceeeceeeccccccccccCCCCCCCcccceeeeecCCCCeEE
Q psy3487 80 NGV----QTFHIKASNEVERQRWVTALELAKSKARQ-HALVAAFSTSAYSTTAVRTGKPFNPLLGETYECDRTADAGWKA 154 (538)
Q Consensus 80 t~~----~~~~L~A~s~~e~~~Wi~al~~a~~~~~R-m~~v~a~~iS~~~~~~~~~~KPfNpllGEtfe~~~~~~~g~~~ 154 (538)
+++ +++.|++++..|...|..+|-.....+.- ...| |. .+. | -|+-+++...-|+|+..
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslVqGch~Aae~~~Ev-----S~-~Cl-------~---~G~~C~L~VhidnGfsl 434 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLVQGCHEAAELISEV-----ST-ACL-------W---NGRECRLTVHIDNGFSL 434 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHHHHHHHHHHHHHhh-----hh-hhe-------e---cCceEEEEEEecCCeEE
Confidence 886 79999999999999999988765443221 1111 10 011 1 25666665555788888
Q ss_pred eecccc
Q psy3487 155 FSEQVS 160 (538)
Q Consensus 155 ~~EQVS 160 (538)
++|.+.
T Consensus 435 ~~~~~g 440 (506)
T KOG3551|consen 435 LSEETG 440 (506)
T ss_pred EecCCC
Confidence 887543
No 95
>KOG1738|consensus
Probab=87.72 E-value=0.11 Score=56.83 Aligned_cols=52 Identities=27% Similarity=0.460 Sum_probs=43.4
Q ss_pred cceEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee
Q psy3487 16 AEMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ 69 (538)
Q Consensus 16 ~~~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~ 69 (538)
-..+|||++... ....|++-||||+|..|+.|.++.+. .+.+.|.|...+|.
T Consensus 562 G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~--~~e~~i~l~~~~i~ 616 (638)
T KOG1738|consen 562 GDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVR--AAESVIKLPLFTIS 616 (638)
T ss_pred chhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhh--chhheeeccchhhh
Confidence 456789997654 44569999999999999999999977 66699999998874
No 96
>KOG4424|consensus
Probab=81.77 E-value=0.91 Score=49.39 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=61.9
Q ss_pred CCCCceEEEEEEe---CCEEEEEecccccCCceeEEEEccceeeecC-------CceEEEEEeCceEEEEEeccHHHHHH
Q psy3487 28 YLKGYQKRWFVLS---NGLLSYYRNQAEMSHTCRGTISLRGAIIQTE-------DSCTFIISNGVQTFHIKASNEVERQR 97 (538)
Q Consensus 28 ~~k~Wk~RwFvL~---~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~-------~~~~F~i~t~~~~~~L~A~s~~e~~~ 97 (538)
..++|..-|++.- +-+++-|.++.|. ...-.|+|.+|.+.+. ..+.|.+......|+|.|+++.-.++
T Consensus 509 ~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv--~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~ 586 (623)
T KOG4424|consen 509 AGKTGILAWSVVPKSDPLVDYSYGSPQDV--RAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQR 586 (623)
T ss_pred cCccceeeeeeccCCCCccccccCCcccc--ccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHH
Confidence 5568999999883 5789999999987 5568999999998531 23455666666899999999999999
Q ss_pred HHHHhHhhhh
Q psy3487 98 WVTALELAKS 107 (538)
Q Consensus 98 Wi~al~~a~~ 107 (538)
|+..+..|..
T Consensus 587 wl~~l~~A~~ 596 (623)
T KOG4424|consen 587 WLEVLLLAVS 596 (623)
T ss_pred HHHHHHhhhc
Confidence 9999886643
No 97
>KOG4236|consensus
Probab=76.37 E-value=3.5 Score=44.93 Aligned_cols=94 Identities=16% Similarity=0.317 Sum_probs=66.7
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-ee--------c--CCceEEEEEeC
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQ--------T--EDSCTFIISNG 81 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~--------~--~~~~~F~i~t~ 81 (538)
.....+|||+...+..-..-+|.|..|+..++..|.+.... +--..|+|..+. |. + ..+++|+|.+.
T Consensus 410 sst~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~~--ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~ 487 (888)
T KOG4236|consen 410 SSTKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNESTN--RYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTA 487 (888)
T ss_pred chhhhhcceEEEEechhhhhhhhhheeccceeEeeecCCCc--eeEEeecHHHhheeeccCCcccCCCCCCCceEEEEee
Confidence 44567889998877655556778999999999999988765 334678887654 21 1 25789999999
Q ss_pred ceEEEEEec--c---------HHHHHHHHHHhHhhhhh
Q psy3487 82 VQTFHIKAS--N---------EVERQRWVTALELAKSK 108 (538)
Q Consensus 82 ~~~~~L~A~--s---------~~e~~~Wi~al~~a~~~ 108 (538)
+-+|++.-+ + ..-.+.|-.+|+.+..+
T Consensus 488 ~~vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alMp 525 (888)
T KOG4236|consen 488 TTVYFVGENPSSTPGGESGVGLDAAQGWETAIQQALMP 525 (888)
T ss_pred eEEEEecCCCCCCccccccccchhhccCchhhhhcccc
Confidence 877766433 1 23367898888877544
No 98
>KOG3549|consensus
Probab=73.18 E-value=9.6 Score=39.16 Aligned_cols=88 Identities=16% Similarity=0.259 Sum_probs=63.8
Q ss_pred CCCcceEEEEEeE--cC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-----------e------ecCC
Q psy3487 13 HSDAEMKGWLFKW--TN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-----------I------QTED 72 (538)
Q Consensus 13 ~~~~~~~G~L~K~--~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-----------i------~~~~ 72 (538)
.+.+.--||..-. .+ ..+.+++||..|++..++-|..+.-. +.....+. | .+.+
T Consensus 278 ~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPPv~------t~dw~rAe~ty~vye~mfki~Kdsd~~D~R 351 (505)
T KOG3549|consen 278 GEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPPVN------TADWSRAEVTYKVYETMFKIVKDSDTVDSR 351 (505)
T ss_pred cceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCCcc------hhhhhhhhhhHHHHHHHHHHhccccccccc
Confidence 3446667998743 33 56778999999999999999887522 22223222 1 1235
Q ss_pred ceEEEEEeCc-eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 73 SCTFIISNGV-QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 73 ~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
++||.|.+.+ +..+|..+...|..+|=++.+.|.
T Consensus 352 ~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~At 386 (505)
T KOG3549|consen 352 QHCFLLQSSGGEPRYFSVELRSELARWENSFQAAT 386 (505)
T ss_pred cceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHH
Confidence 7899887754 889999999999999999888663
No 99
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=69.62 E-value=46 Score=27.69 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=47.2
Q ss_pred CceEEEEEEe---CC--EEEEEeccc--ccCCceeEEEEccceee-ecC----CceEEEEEeCceEEEEEeccHHHHHHH
Q psy3487 31 GYQKRWFVLS---NG--LLSYYRNQA--EMSHTCRGTISLRGAII-QTE----DSCTFIISNGVQTFHIKASNEVERQRW 98 (538)
Q Consensus 31 ~Wk~RwFvL~---~~--~L~Yyk~~~--d~~~~~~g~i~L~~~~i-~~~----~~~~F~i~t~~~~~~L~A~s~~e~~~W 98 (538)
+-+.||.+|. ++ .+..++... +......-+.+|..... ... +...|.|+.+ +.|...|++..|+..+
T Consensus 2 ~kK~r~Lclsv~~~~~~~v~l~k~K~~~~g~f~i~ktW~L~eL~~I~~~~~~~~~~~F~l~~~-k~y~W~a~s~~Ek~~F 80 (91)
T PF15277_consen 2 KKKPRYLCLSVTNSPRIQVRLHKVKQNDNGSFQIGKTWDLDELKAIDGINPDKDTPEFDLTFD-KPYYWEASSAKEKNTF 80 (91)
T ss_dssp GEEEEEEEEEEETTETTEEEEEEEEE-CCS-EEEEEEEEGGG--EEEE-SSS--TTEEEEESS-SEEEEEESSHHHHHHH
T ss_pred CcccEEEEEEEecCCceEEEEEEEEecCCCcEEEeeEEehhhceeeeeecCCCCCcCEEEEEC-CCcEEEeCCHHHHHHH
Confidence 4578888884 33 255555333 22234455678887663 222 2458999885 4999999999999999
Q ss_pred HHHhHhh
Q psy3487 99 VTALELA 105 (538)
Q Consensus 99 i~al~~a 105 (538)
+..|-..
T Consensus 81 i~~L~k~ 87 (91)
T PF15277_consen 81 IRSLWKL 87 (91)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987644
No 100
>KOG2070|consensus
Probab=65.43 E-value=6.7 Score=42.11 Aligned_cols=73 Identities=21% Similarity=0.406 Sum_probs=54.5
Q ss_pred ceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceeeec-----CCceEEEEEeCc-eEEEEEeccHHHHHHHHHHhHh
Q psy3487 32 YQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAIIQT-----EDSCTFIISNGV-QTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 32 Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
-+.|||+|=.++|.++.-..+. ..--.|.++++|..|.. ...+.|+|.... ......++++.+.+.|+++++.
T Consensus 325 ~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~iV~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 325 EKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred hhhheeeeccceeeeeEeccccchhhhccccccceeEEeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhhh
Confidence 3479999987777776655433 23335899999998842 235789987766 5667789999999999999984
No 101
>KOG0772|consensus
Probab=60.96 E-value=2.2e+02 Score=31.35 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=25.6
Q ss_pred CccceEEEeeeeeccccccC---CCCCCCCcCCCCCeEEe
Q psy3487 340 RAPQYYCFTKFACQLNELEE---GVAPTDSRLRPDQRLLE 376 (538)
Q Consensus 340 ~~~r~~~~~~fa~~l~e~~~---~~~ptd~r~r~d~r~~e 376 (538)
...++|-+-.|--.|+.... .++-||++|.||.+++-
T Consensus 386 ~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~ 425 (641)
T KOG0772|consen 386 DTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLIL 425 (641)
T ss_pred CceeeeeccccccchhhhcCCCccCCCCccccCCCceEEE
Confidence 45677777777666654332 24559999999998874
No 102
>KOG1170|consensus
Probab=55.77 E-value=0.45 Score=53.38 Aligned_cols=88 Identities=11% Similarity=0.164 Sum_probs=64.8
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCE-EEEEecccccCCceeEEEEccceeeecC----CceEEEEEeCceEEEEEecc
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGL-LSYYRNQAEMSHTCRGTISLRGAIIQTE----DSCTFIISNGVQTFHIKASN 91 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~-L~Yyk~~~d~~~~~~g~i~L~~~~i~~~----~~~~F~i~t~~~~~~L~A~s 91 (538)
...|-..++.+-...|++|++.+++.. +.|-++..... --.+.+..+.+... .++.|.++++.+...++|++
T Consensus 3 ~~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g~~---~~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn 79 (1099)
T KOG1170|consen 3 VTRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASGPL---FALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCADN 79 (1099)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcc---HHHHhcccccccccccCCCCCCeeEecccHHhhhhccc
Confidence 456777778888888999999999876 55555554321 12445555555432 35789999999999999999
Q ss_pred HHHHHHHHHHhHhhhh
Q psy3487 92 EVERQRWVTALELAKS 107 (538)
Q Consensus 92 ~~e~~~Wi~al~~a~~ 107 (538)
..++..|+.+++...+
T Consensus 80 ~ke~e~wi~~~kt~q~ 95 (1099)
T KOG1170|consen 80 RKEMEKWINQSKTPQH 95 (1099)
T ss_pred hhHHHHhhccccchhh
Confidence 9999999999876544
No 103
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=55.71 E-value=61 Score=29.31 Aligned_cols=73 Identities=12% Similarity=0.220 Sum_probs=47.3
Q ss_pred EEEEEeCCEEEEEecccccCCc-----------------eeEEEEccceeeec------CCceEEEEE-eC-------ce
Q psy3487 35 RWFVLSNGLLSYYRNQAEMSHT-----------------CRGTISLRGAIIQT------EDSCTFIIS-NG-------VQ 83 (538)
Q Consensus 35 RwFvL~~~~L~Yyk~~~d~~~~-----------------~~g~i~L~~~~i~~------~~~~~F~i~-t~-------~~ 83 (538)
--||++.-....||.....+.+ -+--|++....|.. +..+.++|+ +. .+
T Consensus 52 ~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe~egRpE~ 131 (160)
T cd01255 52 MCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAADMESNFLWELIHLKSELEGRPEK 131 (160)
T ss_pred EEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcCcccceEEEEEeecccccCCCcc
Confidence 4688888877777755432222 23355555555532 223455553 32 27
Q ss_pred EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+|.|++++++.+...+..+++...
T Consensus 132 vfqLCcS~~E~k~~flK~Irsilr 155 (160)
T cd01255 132 VFVLCCSTAESRNAFLKTIRSILR 155 (160)
T ss_pred eEEEecCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999887544
No 104
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=53.96 E-value=89 Score=27.98 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=38.2
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccC----CceeEEEEccceeee-----------------------
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMS----HTCRGTISLRGAIIQ----------------------- 69 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~----~~~~g~i~L~~~~i~----------------------- 69 (538)
+.+|-|.|++.....|..=-+.|=|+.|-.-|.....+ ...+--|+|.-..|.
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~~ 81 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISSS 81 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S------
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCCc
Confidence 46788888888777787766667677776666432110 011122333311110
Q ss_pred ------------cCC--ceEEEEEeCc---eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 70 ------------TED--SCTFIISNGV---QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 70 ------------~~~--~~~F~i~t~~---~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
.++ .+.|.+..-+ ..|.|-|++..++++|+++|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 82 SSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp -SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred cCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 011 2455554433 46899999999999999999865
No 105
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=53.72 E-value=23 Score=30.53 Aligned_cols=32 Identities=16% Similarity=0.341 Sum_probs=29.1
Q ss_pred ceEEEEEeCceEEEEEeccHHHHHHHHHHhHh
Q psy3487 73 SCTFIISNGVQTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 73 ~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
.+.|.|.|......|.++|..+++.|++.|+.
T Consensus 70 ~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~ 101 (110)
T PF08458_consen 70 RRYFGLKTAQGVVEFECDSQREYKRWVQGIQH 101 (110)
T ss_pred EEEEEEEecCcEEEEEeCChhhHHHHHHHHHH
Confidence 36799999999999999999999999999874
No 106
>KOG3523|consensus
Probab=47.04 E-value=28 Score=38.54 Aligned_cols=70 Identities=20% Similarity=0.361 Sum_probs=45.7
Q ss_pred EEEEEEeCCEEEEEeccccc-----CCceeEEEEccceee----ec------CCceEEEEE--eC----ceEEEEEeccH
Q psy3487 34 KRWFVLSNGLLSYYRNQAEM-----SHTCRGTISLRGAII----QT------EDSCTFIIS--NG----VQTFHIKASNE 92 (538)
Q Consensus 34 ~RwFvL~~~~L~Yyk~~~d~-----~~~~~g~i~L~~~~i----~~------~~~~~F~i~--t~----~~~~~L~A~s~ 92 (538)
.=|+-|=+.+|..-|...+. +..+++.|.+..+.- .. ..++.|.+. .+ ...+.|+|++.
T Consensus 501 ~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a~s~ 580 (695)
T KOG3523|consen 501 TVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSAESQ 580 (695)
T ss_pred eeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecCCch
Confidence 34666666777766655432 235566666666651 11 134678653 22 26899999999
Q ss_pred HHHHHHHHHhH
Q psy3487 93 VERQRWVTALE 103 (538)
Q Consensus 93 ~e~~~Wi~al~ 103 (538)
.|+++||.|+.
T Consensus 581 Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 581 SDRQRWISALR 591 (695)
T ss_pred HHHHHHHHhcC
Confidence 99999999998
No 107
>KOG0592|consensus
Probab=38.92 E-value=22 Score=39.01 Aligned_cols=84 Identities=23% Similarity=0.338 Sum_probs=60.1
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEe-CCEEEEEecccccCCceeEEEEcccee-eecCCceEEEEEeCceEEEEEeccHH
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLS-NGLLSYYRNQAEMSHTCRGTISLRGAI-IQTEDSCTFIISNGVQTFHIKASNEV 93 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~-~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~~~~~~F~i~t~~~~~~L~A~s~~ 93 (538)
..++|+|.|+...+ -++|.|+|. ++.|.|+..+. ....|.|+++.+. +.......|.|.++.++|+|.- -+.
T Consensus 451 i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~~---~~lk~eip~~~~~~~e~~n~~~~~i~TP~k~~~l~d-~~~ 524 (604)
T KOG0592|consen 451 ILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQN---LVLKGEIPWSPDLRVELKNSSTFFIHTPNKVYYLED-PEQ 524 (604)
T ss_pred HHhHHHHHhhhhhh--hceeEEEecCCCeEEEEeccc---ceeccccccCcccceeeccCcceEEECCccceeccC-ccc
Confidence 45667777775544 466999996 57888887443 3466888888744 3345678899999999998864 233
Q ss_pred HHHHHHHHhHhh
Q psy3487 94 ERQRWVTALELA 105 (538)
Q Consensus 94 e~~~Wi~al~~a 105 (538)
....|..+|...
T Consensus 525 ~as~w~~ai~~~ 536 (604)
T KOG0592|consen 525 RASVWCKAIETV 536 (604)
T ss_pred chhHHHHhhhhh
Confidence 455799999877
No 108
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=29.10 E-value=38 Score=24.84 Aligned_cols=21 Identities=19% Similarity=0.669 Sum_probs=18.5
Q ss_pred CCCCceEEEEEEeCCEEEEEe
Q psy3487 28 YLKGYQKRWFVLSNGLLSYYR 48 (538)
Q Consensus 28 ~~k~Wk~RwFvL~~~~L~Yyk 48 (538)
.+..|.++|..+.|..|..||
T Consensus 26 kVr~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 26 KVRKWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHHHHhhceEEeccceEEEEE
Confidence 446799999999999999987
No 109
>KOG1264|consensus
Probab=27.88 E-value=71 Score=36.83 Aligned_cols=48 Identities=25% Similarity=0.421 Sum_probs=39.6
Q ss_pred CcccCcccCCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecc
Q psy3487 3 ALNTTDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQ 50 (538)
Q Consensus 3 ~~~~~~~~~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~ 50 (538)
+++|.+...+.....++|-|.-+.+.-+.|.+.||||-+..|+|-..-
T Consensus 462 a~~m~~~edd~~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~ 509 (1267)
T KOG1264|consen 462 AVNMEDKEDDHKNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEI 509 (1267)
T ss_pred chhhhcccccchhhhhcceEEEecCCCCceeeeEEEEecceeEeehhc
Confidence 355665555666668999999999999999999999999999998744
No 110
>KOG3520|consensus
Probab=27.62 E-value=78 Score=38.05 Aligned_cols=53 Identities=25% Similarity=0.472 Sum_probs=38.7
Q ss_pred EEEEccceeee---cCCceEEEEEeC---ceEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 59 GTISLRGAIIQ---TEDSCTFIISNG---VQTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 59 g~i~L~~~~i~---~~~~~~F~i~t~---~~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
..|+|....|. .+..--|.|.+. .+.|-|.|.+..|+..||..|+.+...+-+
T Consensus 668 pVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~ 726 (1167)
T KOG3520|consen 668 PVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPR 726 (1167)
T ss_pred CceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCc
Confidence 46777766432 244456677665 389999999999999999999988665433
No 111
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=26.88 E-value=34 Score=36.48 Aligned_cols=20 Identities=20% Similarity=0.147 Sum_probs=17.7
Q ss_pred eeccccceeeeeeCCCCccc
Q psy3487 506 VINGRTKMLKEVYGHARVGH 525 (538)
Q Consensus 506 ~i~~r~~am~acyp~~~~~~ 525 (538)
.|..||||++=|||.|+||.
T Consensus 159 ~i~~ktk~i~ln~P~NPTGa 178 (393)
T COG0436 159 AITPKTKAIILNSPNNPTGA 178 (393)
T ss_pred hcCccceEEEEeCCCCCcCc
Confidence 35569999999999999998
No 112
>KOG3551|consensus
Probab=26.77 E-value=65 Score=33.91 Aligned_cols=50 Identities=22% Similarity=0.386 Sum_probs=37.5
Q ss_pred eEEEEccceeee-----cC-CceEEEEEeCc--eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 58 RGTISLRGAIIQ-----TE-DSCTFIISNGV--QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 58 ~g~i~L~~~~i~-----~~-~~~~F~i~t~~--~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+..|+|.-|-+. .| .+..|+|+++. .+..|+|.|..+.+.|+++|..+..
T Consensus 215 ~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~ 272 (506)
T KOG3551|consen 215 RKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVN 272 (506)
T ss_pred ccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHh
Confidence 346777655542 22 35678999987 6889999999999999999986543
No 113
>COG2154 Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism]
Probab=26.61 E-value=28 Score=29.62 Aligned_cols=17 Identities=35% Similarity=0.761 Sum_probs=14.6
Q ss_pred EEeeccccCCCceeEEE
Q psy3487 153 KAFSEQVSHHPPIAAQY 169 (538)
Q Consensus 153 ~~~~EQVSHHPPisa~~ 169 (538)
..+||+..|||-|...|
T Consensus 50 A~~Ae~~~HHPdi~~~y 66 (101)
T COG2154 50 AEIAEKLNHHPDIEVVY 66 (101)
T ss_pred HHHHHHhCCCCCeEEEe
Confidence 36899999999999766
No 114
>PF15411 PH_10: Pleckstrin homology domain
Probab=26.08 E-value=4.4e+02 Score=22.91 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=49.2
Q ss_pred CCceEEEEEEeCCEEEEEeccccc-----------------CCceeEEEEcccee-eecC---CceEEEEEe----CceE
Q psy3487 30 KGYQKRWFVLSNGLLSYYRNQAEM-----------------SHTCRGTISLRGAI-IQTE---DSCTFIISN----GVQT 84 (538)
Q Consensus 30 k~Wk~RwFvL~~~~L~Yyk~~~d~-----------------~~~~~g~i~L~~~~-i~~~---~~~~F~i~t----~~~~ 84 (538)
..||...+-|=+..|-.++..... ....+|.|.+.... |.+. ..+...|.- ....
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~~g~~~L~i~w~~d~e~~~ 98 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSKPGSYSLQISWKGDPELEN 98 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCCCCceEEEEEEcCCCCCce
Confidence 569998887878888888754321 12346777666544 2222 235555654 2389
Q ss_pred EEEEeccHHHHHHHHHHh
Q psy3487 85 FHIKASNEVERQRWVTAL 102 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al 102 (538)
|.|+..|+.++..|-.+|
T Consensus 99 F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 99 FTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EEEEeCCHHHHHHHHhhC
Confidence 999999999999998765
No 115
>KOG4095|consensus
Probab=20.16 E-value=43 Score=30.31 Aligned_cols=21 Identities=19% Similarity=0.670 Sum_probs=19.1
Q ss_pred CCCCceEEEEEEeCCEEEEEe
Q psy3487 28 YLKGYQKRWFVLSNGLLSYYR 48 (538)
Q Consensus 28 ~~k~Wk~RwFvL~~~~L~Yyk 48 (538)
.+..|.++|+.+.|..|..||
T Consensus 27 KVRrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 27 KVRRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHHHhhheEeecccceEEEE
Confidence 456799999999999999999
Done!