Query psy3487
Match_columns 538
No_of_seqs 390 out of 2423
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 17:58:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3487.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3487hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 9.1E-45 3.1E-49 381.8 5.4 234 108-387 82-340 (438)
2 1zhx_A KES1 protein; oxysterol 99.9 4.8E-28 1.6E-32 254.8 3.7 168 284-452 9-247 (438)
3 2rsg_A Collagen type IV alpha- 99.8 5.3E-21 1.8E-25 159.8 10.8 91 16-106 1-93 (94)
4 3rcp_A Pleckstrin homology dom 99.8 1.3E-19 4.5E-24 153.8 12.0 91 18-108 1-94 (103)
5 1wi1_A Calcium-dependent activ 99.8 1.4E-19 4.8E-24 157.8 11.1 95 11-107 3-110 (126)
6 1v88_A Oxysterol binding prote 99.8 2.1E-19 7E-24 159.7 12.3 94 11-107 3-124 (130)
7 2d9x_A Oxysterol binding prote 99.8 3.1E-19 1.1E-23 156.1 10.7 98 11-108 3-105 (120)
8 2dhk_A TBC1 domain family memb 99.8 6.9E-19 2.3E-23 153.8 12.5 97 10-108 2-105 (119)
9 1x1f_A Signal-transducing adap 99.8 7.7E-19 2.6E-23 159.5 12.2 94 12-107 14-113 (149)
10 1wgq_A FYVE, rhogef and PH dom 99.8 2.2E-18 7.6E-23 147.7 14.1 96 11-108 3-104 (109)
11 2cod_A Centaurin-delta 1; ARF 99.8 1.5E-18 5E-23 150.3 12.5 95 11-107 3-99 (115)
12 1v5u_A SBF1, SET binding facto 99.8 3.1E-18 1.1E-22 148.3 12.7 96 11-108 3-112 (117)
13 2coc_A FYVE, rhogef and PH dom 99.8 2.4E-18 8.2E-23 148.7 11.7 94 11-107 3-106 (112)
14 1pls_A Pleckstrin homology dom 99.8 6.1E-18 2.1E-22 145.9 13.6 93 14-108 3-102 (113)
15 1v89_A Hypothetical protein KI 99.8 7.4E-18 2.5E-22 146.0 13.1 96 11-108 3-113 (118)
16 2dn6_A KIAA0640 protein; PH do 99.7 8.4E-18 2.9E-22 145.2 13.1 96 11-108 3-104 (115)
17 1dyn_A Dynamin; signal transdu 99.7 6.4E-18 2.2E-22 145.7 12.0 90 15-106 11-116 (125)
18 1fao_A Dual adaptor of phospho 99.7 8.6E-18 3E-22 147.8 13.2 97 12-110 14-115 (126)
19 2d9v_A Pleckstrin homology dom 99.7 8.9E-18 3E-22 149.1 13.3 97 10-108 2-115 (130)
20 1fgy_A GRP1; PH domain, signal 99.7 1.6E-17 5.4E-22 145.9 13.3 93 14-108 3-121 (127)
21 1eaz_A Tandem PH domain contai 99.7 1.3E-17 4.5E-22 146.1 12.4 95 12-108 10-112 (125)
22 4a6h_A Phosphatidylinositol 4, 99.7 1.2E-17 4.3E-22 146.0 12.1 91 16-106 6-117 (120)
23 2dkp_A Pleckstrin homology dom 99.7 2.7E-17 9.4E-22 144.8 14.3 93 13-107 18-119 (128)
24 2cof_A Protein KIAA1914; PH do 99.7 7.3E-18 2.5E-22 144.3 10.2 95 10-107 2-101 (107)
25 2da0_A 130-kDa phosphatidylino 99.7 2.3E-17 7.7E-22 142.9 13.4 97 12-111 6-105 (114)
26 2i5f_A Pleckstrin; PH domain, 99.7 2.1E-17 7.1E-22 141.3 12.9 92 13-106 4-108 (109)
27 1u5d_A SKAP55, SRC kinase-asso 99.7 1.1E-17 3.8E-22 142.4 10.9 93 14-108 1-106 (108)
28 3aj4_A Pleckstrin homology dom 99.7 2.3E-17 7.7E-22 142.1 12.0 91 14-106 3-110 (112)
29 1v5p_A Pleckstrin homology dom 99.7 2.9E-17 9.8E-22 145.1 12.5 93 15-107 14-120 (126)
30 1upq_A PEPP1; PH domain, phosp 99.7 3.3E-17 1.1E-21 143.2 12.8 93 14-108 9-110 (123)
31 2d9y_A Pleckstrin homology dom 99.7 6.3E-17 2.2E-21 140.1 13.5 93 13-107 8-109 (117)
32 2yry_A Pleckstrin homology dom 99.7 8.8E-17 3E-21 140.3 13.9 92 14-107 20-120 (122)
33 2rlo_A Centaurin-gamma 1; spli 99.7 1.5E-17 5E-22 147.2 8.9 96 14-109 2-126 (128)
34 2p0d_A RHO GTPase-activating p 99.7 4.5E-17 1.5E-21 144.4 11.7 101 11-111 7-128 (129)
35 1x05_A Pleckstrin; PH domain, 99.7 5.8E-17 2E-21 143.1 12.3 95 12-108 14-121 (129)
36 1btk_A Bruton'S tyrosine kinas 99.7 7.1E-17 2.4E-21 149.9 13.3 92 15-108 2-133 (169)
37 1unq_A RAC-alpha serine/threon 99.7 1.5E-17 5.1E-22 146.1 7.9 94 13-108 5-111 (125)
38 2y7b_A Actin-binding protein a 99.7 4.5E-17 1.5E-21 144.7 10.6 95 14-108 3-129 (134)
39 2w2x_D 1-phosphatidylinositol- 99.7 5.3E-17 1.8E-21 143.0 10.9 97 12-108 8-120 (124)
40 1u5f_A SRC-associated adaptor 99.7 1.4E-16 4.8E-21 144.3 13.8 96 12-109 13-121 (148)
41 3cxb_B Pleckstrin homology dom 99.7 1E-16 3.5E-21 138.6 11.7 89 18-108 2-102 (112)
42 1wg7_A Dedicator of cytokinesi 99.7 5.8E-17 2E-21 147.1 10.3 95 12-108 14-125 (150)
43 2lul_A Tyrosine-protein kinase 99.7 1.8E-16 6.3E-21 146.4 13.4 98 13-111 12-125 (164)
44 1wjm_A Beta-spectrin III; PH d 99.7 1.2E-16 4.1E-21 140.1 11.0 99 10-108 2-118 (123)
45 1x1g_A Pleckstrin 2; PH domain 99.7 8.1E-17 2.8E-21 142.1 9.6 94 13-108 15-125 (129)
46 1btn_A Beta-spectrin; signal t 99.7 1.7E-16 5.9E-21 134.8 10.9 88 18-105 1-106 (106)
47 1u5e_A SRC-associated adaptor 99.7 4.3E-16 1.5E-20 149.7 12.8 95 12-108 102-209 (211)
48 2ys3_A UNC-112-related protein 99.6 3.1E-16 1.1E-20 137.4 8.4 97 10-106 3-111 (137)
49 3tfm_A Myosin X; split PH doma 99.6 8E-16 2.7E-20 149.7 12.1 95 12-108 54-156 (228)
50 2j59_M RHO-GTPase activating p 99.6 7.1E-16 2.4E-20 142.7 10.6 94 15-108 2-112 (168)
51 2r09_A Cytohesin-3; autoinhibi 99.6 4.9E-15 1.7E-19 153.0 14.0 93 14-108 211-329 (347)
52 1dro_A Beta-spectrin; cytoskel 99.6 1.3E-15 4.3E-20 133.5 7.7 98 11-108 3-120 (122)
53 3a8p_A T-lymphoma invasion and 99.6 4.8E-15 1.6E-19 147.1 11.0 97 12-108 7-125 (263)
54 3lju_X ARF-GAP with dual PH do 99.6 6.7E-15 2.3E-19 154.0 12.6 94 13-108 266-373 (386)
55 2dtc_A RAL guanine nucleotide 99.6 1.9E-14 6.5E-19 126.0 13.1 92 17-108 2-113 (126)
56 1qqg_A IRS-1, insulin receptor 99.6 5E-15 1.7E-19 147.0 10.4 95 12-110 6-115 (264)
57 4bbk_A Kindlin-1, fermitin fam 99.5 3E-14 1E-18 126.3 12.1 95 13-107 23-129 (165)
58 4f7h_A Fermitin family homolog 99.5 3.7E-14 1.3E-18 127.1 12.4 95 13-107 44-150 (173)
59 3pp2_A RHO GTPase-activating p 99.5 4.8E-14 1.6E-18 124.0 13.0 96 12-107 4-123 (124)
60 3tca_A Amyloid beta A4 precurs 99.5 1.5E-14 5.1E-19 145.4 9.7 93 12-106 164-275 (291)
61 2q13_A DCC-interacting protein 99.5 3.1E-14 1.1E-18 149.2 12.4 92 14-108 276-376 (385)
62 3lju_X ARF-GAP with dual PH do 99.5 3.6E-14 1.2E-18 148.4 11.3 91 16-108 146-247 (386)
63 4h8s_A DCC-interacting protein 99.5 3.4E-14 1.2E-18 150.0 9.0 94 12-108 297-399 (407)
64 2rov_A RHO-associated protein 99.4 5.3E-13 1.8E-17 116.0 10.2 91 17-107 2-115 (117)
65 2fjl_A 1-phosphatidylinositol- 99.3 7.1E-12 2.4E-16 111.9 11.3 91 17-107 2-148 (150)
66 4ejn_A RAC-alpha serine/threon 99.3 3.3E-12 1.1E-16 135.9 9.0 97 13-111 3-112 (446)
67 3hk0_A Growth factor receptor- 99.3 1.5E-11 5E-16 120.7 12.1 93 13-107 129-240 (256)
68 4gmv_A RAS-associated and plec 99.2 5.2E-11 1.8E-15 118.2 11.5 96 12-107 154-266 (281)
69 2d9w_A Docking protein 2; PH d 99.2 2.2E-10 7.5E-15 98.5 13.5 93 12-105 8-119 (127)
70 3a8n_A TIAM-1, T-lymphoma inva 99.2 1.7E-11 5.7E-16 121.6 6.9 97 11-107 6-124 (279)
71 1w1g_A HPDK1, 3-phosphoinositi 99.2 1E-10 3.6E-15 104.3 10.7 92 12-108 48-140 (151)
72 2coa_A Protein kinase C, D2 ty 98.9 4.4E-09 1.5E-13 90.3 10.3 96 11-108 3-120 (125)
73 2d9z_A Protein kinase C, NU ty 98.8 6.3E-08 2.2E-12 83.3 11.6 95 12-108 4-124 (129)
74 2hbt_A EGL nine homolog 1; pro 98.5 1.4E-07 4.7E-12 92.4 6.2 88 430-525 44-131 (247)
75 3tfm_A Myosin X; split PH doma 98.3 1.4E-06 4.7E-11 84.3 8.6 76 12-89 17-96 (228)
76 1v61_A RAC/CDC42 guanine nucle 97.8 0.00012 4.1E-09 64.2 10.7 96 15-110 27-129 (132)
77 1v5m_A SH2 and PH domain-conta 97.7 0.0002 6.9E-09 61.7 9.7 93 13-107 15-130 (136)
78 3ml4_A Protein DOK-7; tyrosine 97.5 0.00064 2.2E-08 64.1 11.3 92 13-106 6-112 (224)
79 1zc3_B Exocyst complex protein 97.5 0.0023 8E-08 54.5 13.4 96 13-108 5-108 (113)
80 3mpx_A FYVE, rhogef and PH dom 97.4 0.00068 2.3E-08 71.4 11.5 96 13-110 241-340 (434)
81 3qwm_A Iqsec1, IQ motif and SE 97.0 0.0036 1.2E-07 55.1 10.2 100 12-111 9-126 (140)
82 2dfk_A Collybistin II; DH doma 97.0 0.0072 2.5E-07 63.0 14.2 100 12-111 253-367 (402)
83 2vrw_B P95VAV, VAV1, proto-onc 96.9 0.0069 2.4E-07 63.1 13.1 96 13-109 231-337 (406)
84 2lg1_A A-kinase anchor protein 96.9 0.006 2E-07 56.6 11.0 95 13-108 68-173 (185)
85 2pz1_A RHO guanine nucleotide 96.9 0.01 3.5E-07 63.0 14.3 99 13-111 331-444 (466)
86 1dbh_A Protein (human SOS 1); 96.9 0.0062 2.1E-07 62.2 11.8 92 13-108 244-350 (354)
87 1mai_A Phospholipase C delta-1 96.8 0.0076 2.6E-07 52.6 10.0 88 20-108 17-122 (131)
88 3ky9_A Proto-oncogene VAV; cal 96.7 0.0086 2.9E-07 65.6 12.2 96 13-109 403-509 (587)
89 1xcg_A PDZ-rhogef, RHO guanine 96.7 0.012 4.2E-07 60.2 12.7 95 13-108 250-367 (368)
90 1kz7_A Guanine nucleotide exch 96.6 0.018 6.1E-07 58.8 13.2 96 13-108 207-326 (353)
91 3t06_A PDZ-rhogef, RHO guanine 96.6 0.011 3.7E-07 61.8 11.7 95 13-108 292-409 (418)
92 1nty_A Triple functional domai 96.4 0.023 7.7E-07 56.9 12.2 96 13-108 200-309 (311)
93 3p6a_A RHO guanine nucleotide 96.2 0.036 1.2E-06 56.9 12.5 95 13-108 256-372 (377)
94 2rgn_B RHOA/RAC/CDC42 exchange 96.1 0.067 2.3E-06 54.5 13.7 97 13-109 204-320 (354)
95 1txd_A RHO guanine nucleotide 96.0 0.046 1.6E-06 56.4 12.1 97 13-110 254-372 (385)
96 3v5w_A G-protein coupled recep 95.7 0.056 1.9E-06 59.9 12.1 96 13-112 556-657 (689)
97 3odw_A RHO guanine nucleotide 95.7 0.066 2.3E-06 57.9 12.3 95 13-108 409-525 (536)
98 2z0q_A XPLN, RHO guanine nucle 95.6 0.054 1.8E-06 54.9 10.5 90 13-107 229-346 (346)
99 3jzy_A Intersectin 2; C2 domai 94.5 0.0066 2.3E-07 65.0 0.0 91 14-108 251-363 (510)
100 3ksy_A SOS-1, SON of sevenless 93.3 0.24 8.1E-06 57.9 10.1 92 13-108 441-547 (1049)
101 1foe_A T-lymphoma invasion and 92.2 1.2 4E-05 45.5 12.5 98 13-110 235-369 (377)
102 3zvr_A Dynamin-1; hydrolase, D 92.0 1 3.5E-05 50.5 12.5 85 16-102 540-640 (772)
103 1fho_A UNC-89; pleckstrin homo 90.8 0.78 2.7E-05 39.0 7.9 96 12-108 6-113 (119)
104 1z87_A Alpha-1-syntrophin; pro 85.5 1.6 5.4E-05 42.5 7.1 48 59-106 206-261 (263)
105 2adz_A Alpha-1-syntrophin; pro 83.9 2 6.8E-05 39.1 6.5 48 59-106 121-176 (178)
106 2zkm_X 1-phosphatidylinositol- 68.6 22 0.00075 40.0 10.9 80 20-104 21-132 (799)
107 3qr0_A Phospholipase C-beta (P 60.6 40 0.0014 37.9 11.0 81 20-104 26-139 (816)
108 3ohm_B 1-phosphatidylinositol- 57.2 50 0.0017 37.5 11.1 80 20-104 25-136 (885)
109 3hie_A Protein PSL1, exocyst c 53.6 98 0.0034 27.7 10.1 78 30-108 62-149 (171)
110 3a58_A Exocyst complex compone 51.0 93 0.0032 30.4 10.2 79 29-108 131-219 (320)
111 3ulb_A Target of rapamycin com 47.6 1.3E+02 0.0043 25.4 10.1 79 30-108 25-115 (121)
112 3a98_B Engulfment and cell mot 23.3 4.3E+02 0.015 24.1 10.3 70 35-104 51-147 (203)
113 4emo_A Sharpin; pleckstrin hom 22.2 1.3E+02 0.0046 25.0 5.1 50 59-108 72-124 (129)
114 2c5i_P Vacuolar protein sortin 20.7 26 0.00088 21.5 0.4 10 156-165 1-10 (29)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=9.1e-45 Score=381.84 Aligned_cols=234 Identities=21% Similarity=0.261 Sum_probs=192.4
Q ss_pred hhcccceeeceeeccccccc-------cccCCCCCCCcccceeeeecC----CCC-eEEeeccccCCCceeEEEEEcC--
Q psy3487 108 KARQHALVAAFSTSAYSTTA-------VRTGKPFNPLLGETYECDRTA----DAG-WKAFSEQVSHHPPIAAQYVEGK-- 173 (538)
Q Consensus 108 ~~~Rm~~v~a~~iS~~~~~~-------~~~~KPfNpllGEtfe~~~~~----~~g-~~~~~EQVSHHPPisa~~~e~~-- 173 (538)
+.+||++|++|++|+|+... .+.+|||||+|||||+|.+.+ +.| ++|+||||||||||||||++++
T Consensus 82 p~eRm~~V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~ 161 (438)
T 1zhx_A 82 ELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKN 161 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCC
Confidence 89999999999999986532 467899999999999999854 246 7999999999999999999997
Q ss_pred CEEEEEEEeeeEEEeee-EEEEEeceeEEEEEcCCCeEEEEEeeceEEEeeEecceEEeecceEEEEECCCCCeEEEEEe
Q psy3487 174 AWKAWQDLAVHSKFRGK-YIQVTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCRLTFY 252 (538)
Q Consensus 174 g~~~~g~~~~~~kF~g~-sv~i~~~G~~~i~f~~~~e~y~~~~p~~~v~~li~G~~~~e~~G~~~i~~~~tg~~~~l~f~ 252 (538)
+|.++|+..++++|+|+ |+++.+.|..+|+|. +|+|+|++|+++++|||+|++|+|++|+++|+| +||++|.|+|.
T Consensus 162 g~~~~g~~~~kskF~G~~Sv~v~~~G~~~l~l~--~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~-~tg~~~~l~F~ 238 (438)
T 1zhx_A 162 KVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIK--DESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFS 238 (438)
T ss_dssp TEEEEEEEEEEEEECTTCCEEEEEECCEEEEET--TEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEE
T ss_pred CEEEEEEeeeEEEEcCceEEEEEcceEEEEEEC--CcEEEEecCcEEEEEEEecceeEecCCeEEEEc-CCCCEEEEEEc
Confidence 89999999999999999 999999999999998 899999999999999999999999999999999 69999999999
Q ss_pred eeeeccCCceeeeeccC-C-------CCCeeeeeCCCCCCCcceeeeeeccCCCCCCCCCCCCCCCCCcccchhcccccc
Q psy3487 253 PYSYFSRQTQRRVLPWK-P-------NTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPLSMLQRLTEDFE 324 (538)
Q Consensus 253 ~~~~fs~~~~~~v~G~v-~-------g~~~~~~l~G~W~~~i~lw~i~k~~iGkdls~i~~Pv~~~ep~s~Lqr~~e~~e 324 (538)
++|||+++. +.|+|.| + +....++|.|+|++.+.+.+.-. | +....+|.+
T Consensus 239 ~kg~f~g~~-n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~---~-------------~~~~~~~~~----- 296 (438)
T 1zhx_A 239 GRGYFSGKK-NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANK---K-------------EESRLFYDA----- 296 (438)
T ss_dssp CSSSSCSSS-SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTC---G-------------GGCEEEEET-----
T ss_pred CCCCcCCCc-cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCC---C-------------ccceEEecc-----
Confidence 999999874 8999999 3 23334999999999988754310 0 001344442
Q ss_pred chhHHHhhhcCCCCCCccceEEEeeeeeccccccCCCCCCCCcC--CCCCeEEeeeeccccccee
Q psy3487 325 YAHVLDEAAATDDVFRAPQYYCFTKFACQLNELEEGVAPTDSRL--RPDQRLLEVSHHPPIAAQY 387 (538)
Q Consensus 325 y~~ll~~a~~~~d~~~~~r~~~~~~fa~~l~e~~~~~~ptd~r~--r~d~r~~e~~hhpp~~a~~ 387 (538)
...+.. + +. +. ..+..+|||||+ |||+|++|.|.++.|+..+
T Consensus 297 -------~~~~~~--~---------~~--v~-p~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK 340 (438)
T 1zhx_A 297 -------ARIPAE--H---------LN--VK-PLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTK 340 (438)
T ss_dssp -------TTSCCC--C---------CB--CC-CGGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHH
T ss_pred -------CCCCCc--c---------cc--CC-ChhhCCCcccchhhHHHHHHHHcCCHHHHHHHH
Confidence 111111 0 00 11 112357999996 9999999999999998865
No 2
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=99.94 E-value=4.8e-28 Score=254.80 Aligned_cols=168 Identities=21% Similarity=0.204 Sum_probs=137.9
Q ss_pred CCcceeeeeeccCCC---CCCCCCCCCCCCCCcccchhccccccchhHHHhhhcCC----------C----CCCccceEE
Q psy3487 284 GSMQIWSILKNSIGK---DLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATD----------D----VFRAPQYYC 346 (538)
Q Consensus 284 ~~i~lw~i~k~~iGk---dls~i~~Pv~~~ep~s~Lqr~~e~~ey~~ll~~a~~~~----------d----~~~~~r~~~ 346 (538)
...++|+.+.++||+ |||+|+|||++|||+|+||+++++|||++||++|+..+ | +.+.+||.+
T Consensus 9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~ 88 (438)
T 1zhx_A 9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA 88 (438)
T ss_dssp TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence 456789755556654 99999999999999999999999999999999888765 4 014699999
Q ss_pred Eeeeeecc------------c----cccCCCCCCCCcCCCC--------CeEE-e-eeecccccceeeecC--CeeEeEe
Q psy3487 347 FTKFACQL------------N----ELEEGVAPTDSRLRPD--------QRLL-E-VSHHPPIAAQYVEGK--AWKAWQD 398 (538)
Q Consensus 347 ~~~fa~~l------------~----e~~~~~~ptd~r~r~d--------~r~~-e-~~hhpp~~a~~~e~~--~~~~~~~ 398 (538)
|++|++|. + +.+|.|++|+.+.++| .|++ | |||||||+|+|++++ +|+++|.
T Consensus 89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~ 168 (438)
T 1zhx_A 89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence 99999861 1 2334466688777765 3655 5 899999999999996 7999999
Q ss_pred eeeecccccc-eEEEEecceEEEEeec-------------------------ccceEeeeeeccEEeEEEccceeeeccC
Q psy3487 399 LAVHSKFRGK-YIQVTPAGRFNLVFTK-------------------------SSMAVLHEVLGMYHSGVFKDGQLVSNKS 452 (538)
Q Consensus 399 ~~~~~kF~G~-s~~~~~~G~~~~~~~~-------------------------~g~~V~nEv~gl~~~g~f~~g~l~~~~~ 452 (538)
..+++||||+ |+++.+.|.++|+|.+ +.+.|.+ .+|+.+...|+.+++|+|+.
T Consensus 169 ~~~kskF~G~~Sv~v~~~G~~~l~l~~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~-~tg~~~~l~F~~kg~f~g~~ 247 (438)
T 1zhx_A 169 NQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSGKK 247 (438)
T ss_dssp EEEEEEECTTCCEEEEEECCEEEEETTEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSSCSSS
T ss_pred eeeEEEEcCceEEEEEcceEEEEEECCcEEEEecCcEEEEEEEecceeEecCCeEEEEc-CCCCEEEEEEcCCCCcCCCc
Confidence 9999999999 9999999999999863 2335555 57899999999999998764
No 3
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.84 E-value=5.3e-21 Score=159.83 Aligned_cols=91 Identities=43% Similarity=0.776 Sum_probs=84.0
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCceEEEEEeccHH
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGVQTFHIKASNEV 93 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~~~~~L~A~s~~ 93 (538)
++++|||.|+++..++|++|||||+++.|+||+++.+....|+|.|+|.++.+.+ .++++|.|.+++++|+|+|+|+.
T Consensus 1 V~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~ 80 (94)
T 2rsg_A 1 VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPD 80 (94)
T ss_dssp CCEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSC
T ss_pred CCEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecccccccceeeEecceeeeecCcccceeEEEEeCCeEEEEECCCHH
Confidence 4789999999999999999999999999999999987767899999999998754 46789999999999999999999
Q ss_pred HHHHHHHHhHhhh
Q psy3487 94 ERQRWVTALELAK 106 (538)
Q Consensus 94 e~~~Wi~al~~a~ 106 (538)
|+++|+++|+.|+
T Consensus 81 e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 81 HRQQWIDAIEQHK 93 (94)
T ss_dssp CTHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999875
No 4
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.81 E-value=1.3e-19 Score=153.76 Aligned_cols=91 Identities=44% Similarity=0.801 Sum_probs=80.9
Q ss_pred eEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee--cCCceEEEEEeC-ceEEEEEeccHHH
Q psy3487 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ--TEDSCTFIISNG-VQTFHIKASNEVE 94 (538)
Q Consensus 18 ~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~--~~~~~~F~i~t~-~~~~~L~A~s~~e 94 (538)
++|||.|+++..++|++|||||+++.|+||+++.+....|+|.|+|.+|.|. ++++++|.|.++ .++|+|+|+|+.|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e 80 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAE 80 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHH
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHH
Confidence 6899999999999999999999999999999998765578999999999984 456899999886 6999999999999
Q ss_pred HHHHHHHhHhhhhh
Q psy3487 95 RQRWVTALELAKSK 108 (538)
Q Consensus 95 ~~~Wi~al~~a~~~ 108 (538)
+++|+.+|+.++..
T Consensus 81 ~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 81 RQRWLVALGSSKAS 94 (103)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988665
No 5
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=1.4e-19 Score=157.77 Aligned_cols=95 Identities=20% Similarity=0.310 Sum_probs=82.8
Q ss_pred CCCCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEe----cccccCCceeEEEEccceeee---cC-----CceEEE
Q psy3487 11 ASHSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYR----NQAEMSHTCRGTISLRGAIIQ---TE-----DSCTFI 77 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk----~~~d~~~~~~g~i~L~~~~i~---~~-----~~~~F~ 77 (538)
..++.+.++|||.|+|. ..|.||||||||.+++|+||+ ++.+. +|+|.|.|.++.|. +. ..+.|.
T Consensus 3 ~~p~n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~--~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~ 80 (126)
T 1wi1_A 3 SGSSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKA--EPQELLQLDGYTVDYTDPQPGLEGGRAFFN 80 (126)
T ss_dssp CCCCCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSS--CCSEEEECSSCEEEECCCCSSCCSCSSEEE
T ss_pred CCCCCCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCC--CCceEEECCCcEEEEecCCcccccCceEEE
Confidence 34567799999999987 669999999999999999999 77655 89999999999975 22 347899
Q ss_pred EEeCceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 78 ISNGVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 78 i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+..++++|+|.|+++.|++.||.+|..|.-
T Consensus 81 ~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 81 AVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp EECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 988888999999999999999999998753
No 6
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=2.1e-19 Score=159.74 Aligned_cols=94 Identities=31% Similarity=0.468 Sum_probs=82.0
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC----CceEEEEEeCc----
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE----DSCTFIISNGV---- 82 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~----~~~~F~i~t~~---- 82 (538)
.++..+.++|||.|++ ..++|++|||||++++|+||+++.|. .|+|.|+|.+|.|.+. ++++|.|.++.
T Consensus 3 ~~~~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~~~--~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i 79 (130)
T 1v88_A 3 SGSSGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQKNG--QWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSI 79 (130)
T ss_dssp CSSSSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSSSC--CCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCC
T ss_pred CCCCceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCCCC--CceEEEEcCCCEEEECCCCCCCeEEEEEcCCcccc
Confidence 3567789999999988 88999999999999999999999876 8999999999998532 34899998653
Q ss_pred --------------------eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 83 --------------------QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 83 --------------------~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+.|+|+|+++.|+++||.+|+.+..
T Consensus 80 ~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 80 WAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp SCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3499999999999999999998864
No 7
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=3.1e-19 Score=156.06 Aligned_cols=98 Identities=37% Similarity=0.729 Sum_probs=87.2
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEe--CCEEEEEecccccCCceeEEEEccceeeec--CCceEEEEEeCc-eEE
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLS--NGLLSYYRNQAEMSHTCRGTISLRGAIIQT--EDSCTFIISNGV-QTF 85 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~--~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--~~~~~F~i~t~~-~~~ 85 (538)
.....+.++|||.|+++..++|++|||||+ ++.|+||+++.+....|+|.|+|.++.|.+ +++++|.|.++. ++|
T Consensus 3 s~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~ 82 (120)
T 2d9x_A 3 SGSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQY 82 (120)
T ss_dssp CCCSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCE
T ss_pred CCCCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecCCCCCEEEEEcCCCCEE
Confidence 355678899999999999999999999998 689999999987656789999999999865 457899999886 999
Q ss_pred EEEeccHHHHHHHHHHhHhhhhh
Q psy3487 86 HIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 86 ~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+|+|+++.|+++|+.+|+.+...
T Consensus 83 ~l~a~s~~e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 83 KLRATDAKERQHWVSRLQICTQH 105 (120)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988665
No 8
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=6.9e-19 Score=153.77 Aligned_cols=97 Identities=21% Similarity=0.438 Sum_probs=86.3
Q ss_pred cCCCCCcceEEEEEeEcC--CCCCceEEEEEEeCC--EEEEEecccccCCceeEEEEccceeeec---CCceEEEEEeCc
Q psy3487 10 KASHSDAEMKGWLFKWTN--YLKGYQKRWFVLSNG--LLSYYRNQAEMSHTCRGTISLRGAIIQT---EDSCTFIISNGV 82 (538)
Q Consensus 10 ~~~~~~~~~~G~L~K~~~--~~k~Wk~RwFvL~~~--~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~ 82 (538)
+....++.++|||.|++. ..+.|++|||||+++ .|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.++.
T Consensus 2 ss~~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~--~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~ 79 (119)
T 2dhk_A 2 SSGSSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDA--NPLDSIDLSSAVFDCKADAEEGIFEIKTPS 79 (119)
T ss_dssp CCSCSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCC--SCSEEEEGGGCEEEECTTGGGCEEEEECSS
T ss_pred CCCCCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCc--ccccEEECCCCEEEecCCCCCCEEEEEeCC
Confidence 345678899999999996 789999999999988 99999999876 889999999999753 346899999999
Q ss_pred eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 83 QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 83 ~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++|+|+|+++.|+++|+.+|+.+...
T Consensus 80 r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 80 RVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988654
No 9
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=7.7e-19 Score=159.46 Aligned_cols=94 Identities=12% Similarity=0.249 Sum_probs=83.6
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee--c----CCceEEEEEeCceEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ--T----EDSCTFIISNGVQTF 85 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~--~----~~~~~F~i~t~~~~~ 85 (538)
...++.++|||.|+++..+.|++|||||++++|+||+++.|. .+.|.|+|.++.+. . ...++|.|.++.++|
T Consensus 14 ~~~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~--~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~ 91 (149)
T 1x1f_A 14 TALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSI--IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEV 91 (149)
T ss_dssp SSSCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCS--SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCE
T ss_pred CCCCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCcc--ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEE
Confidence 344589999999999999999999999999999999999877 77899999998754 1 235799999999999
Q ss_pred EEEeccHHHHHHHHHHhHhhhh
Q psy3487 86 HIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 86 ~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+|+|+|+.|+++||.+|+.+..
T Consensus 92 ~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 92 QLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHc
Confidence 9999999999999999997755
No 10
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.78 E-value=2.2e-18 Score=147.75 Aligned_cols=96 Identities=22% Similarity=0.413 Sum_probs=84.3
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-----CCceEEEEEeCc-eE
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-----EDSCTFIISNGV-QT 84 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~-~~ 84 (538)
.+++.+.++|||.|++...+.|++|||||+++.|+||+++.+. .|.|.|+|.++.+.. ..+++|.|.++. ++
T Consensus 3 ~~~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~ 80 (109)
T 1wgq_A 3 SGSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDV--AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVF 80 (109)
T ss_dssp SCCCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCS--SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEE
T ss_pred CCCCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcC--ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeE
Confidence 4567889999999999999999999999999999999999876 788999999999743 135899998765 78
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|+|+++.|+..|+.+|+.+...
T Consensus 81 ~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 81 YVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHSC
T ss_pred EEEECCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999987543
No 11
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=1.5e-18 Score=150.35 Aligned_cols=95 Identities=28% Similarity=0.487 Sum_probs=85.4
Q ss_pred CCCCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-eecCCceEEEEEeCceEEEEE
Q psy3487 11 ASHSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQTEDSCTFIISNGVQTFHIK 88 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~~~~~~F~i~t~~~~~~L~ 88 (538)
.....+.++|||.|++. ..+.|++|||||+++.|+||+++.+. .|+|.|+|..+. |.+.++++|.|.++.++|+|+
T Consensus 3 ~~~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~~v~~~~~~~F~i~~~~r~~~l~ 80 (115)
T 2cod_A 3 SGSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEM--YSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFR 80 (115)
T ss_dssp CCCSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCS--SCCCEEETTTEEEEEEETTTEEEEEESSCCEEEE
T ss_pred CCCCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCc--ccCCEEECCcceEEEeCCCCEEEEEeCCcEEEEE
Confidence 44567889999999998 78999999999999999999999875 789999999985 555568999999999999999
Q ss_pred eccHHHHHHHHHHhHhhhh
Q psy3487 89 ASNEVERQRWVTALELAKS 107 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a~~ 107 (538)
|+++.|+++|+.+|+.+..
T Consensus 81 a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 81 VEKEEERNDWISILLNALK 99 (115)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999998864
No 12
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.76 E-value=3.1e-18 Score=148.33 Aligned_cols=96 Identities=24% Similarity=0.515 Sum_probs=84.3
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEe--CCEEEEEecccccCCceeEEEEccceeeec------------CCceEE
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLS--NGLLSYYRNQAEMSHTCRGTISLRGAIIQT------------EDSCTF 76 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~--~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------------~~~~~F 76 (538)
...+.+.++|||.|++...+.|++|||||+ ++.|+||+++.+. .|+|.|+|..+.+.. ...++|
T Consensus 3 ~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F 80 (117)
T 1v5u_A 3 SGSSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDT--ECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFF 80 (117)
T ss_dssp SSCCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCS--SCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCE
T ss_pred CCcCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCC--ccceEEEccCcEEEeecCccccccccCCCCeEE
Confidence 355778999999999999999999999999 8999999999875 789999999988531 123799
Q ss_pred EEEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 77 IISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 77 ~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.++.++|+|+|+++.|+++|+.+|+.+...
T Consensus 81 ~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 81 DVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp EEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred EEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999987543
No 13
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=2.4e-18 Score=148.68 Aligned_cols=94 Identities=16% Similarity=0.219 Sum_probs=81.8
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCC---EEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEe
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNG---LLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISN 80 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~---~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t 80 (538)
...++..++|||.|+++ .+.|++|||||+++ +|+||++++|. .|.|.|+|.+|.|.. +.+++|.|..
T Consensus 3 ~~~~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~--~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~ 79 (112)
T 2coc_A 3 SGSSGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQDG--RLPRTIPLPSCKLSVPDPEERLDSGHVWKLQW 79 (112)
T ss_dssp SCCSSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTCS--SSCSEECGGGCEEECCCSSSCCSSSEEEEEEE
T ss_pred cccCCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCcc--CcceEEEcCCCEEEecCcccccCCCCEEEEec
Confidence 34566778899999875 88999999999974 89999999887 789999999999872 2468999999
Q ss_pred CceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+.++|+|+|+++.++++|+.+|+.|..
T Consensus 80 ~~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 80 AKQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp TTEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998743
No 14
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=6.1e-18 Score=145.87 Aligned_cols=93 Identities=22% Similarity=0.417 Sum_probs=83.1
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------CCceEEEEEeCc-eEEE
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------EDSCTFIISNGV-QTFH 86 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~~~~~F~i~t~~-~~~~ 86 (538)
+.+.++|||.|++...+.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.++. ++|+
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~ 80 (113)
T 1pls_A 3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDN--SPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHF 80 (113)
T ss_dssp CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCS--SCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEE
T ss_pred CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCC--CcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEE
Confidence 4678999999999999999999999999999999999765 889999999998742 245799998876 9999
Q ss_pred EEeccHHHHHHHHHHhHhhhhh
Q psy3487 87 IKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|+++.|+++|+.+|+.+...
T Consensus 81 l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 81 FQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp EECSSHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999988654
No 15
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=7.4e-18 Score=145.96 Aligned_cols=96 Identities=28% Similarity=0.511 Sum_probs=84.7
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEe---
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISN--- 80 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t--- 80 (538)
.+.+.+.++|||.|++...+.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.+
T Consensus 3 ~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~ 80 (118)
T 1v89_A 3 SGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDT--KPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW 80 (118)
T ss_dssp CSSSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCC--SCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCC
T ss_pred CCCCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCC--CceEEEECCCCEEEEcCcCcccCCcceEEEECCcc
Confidence 3567789999999999999999999999999999999999875 789999999998742 1367999987
Q ss_pred -----CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 81 -----GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 81 -----~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+.++|+|+|+++.|+++|+.+|+.+...
T Consensus 81 ~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 113 (118)
T 1v89_A 81 DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGS 113 (118)
T ss_dssp SSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCcEEEEECCCHHHHHHHHHHHHHHHcc
Confidence 6799999999999999999999988653
No 16
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=8.4e-18 Score=145.17 Aligned_cols=96 Identities=26% Similarity=0.511 Sum_probs=84.7
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-ee--c---CCceEEEEEeCceE
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQ--T---EDSCTFIISNGVQT 84 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~--~---~~~~~F~i~t~~~~ 84 (538)
.+.+.+.++|||.|++...+.|++|||||.++.|+||+++.+. .|+|.|+|.++. |. + ..+++|.|.++.++
T Consensus 3 s~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~ 80 (115)
T 2dn6_A 3 SGSSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLK--DKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKT 80 (115)
T ss_dssp CCCCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCS--SEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCE
T ss_pred CCCCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCc--ccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCE
Confidence 4567789999999999999999999999999999999998765 899999999854 42 2 24589999999999
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|+|+++.|+++|+.+|+.+...
T Consensus 81 ~~l~a~s~~e~~~Wi~ai~~~~~~ 104 (115)
T 2dn6_A 81 FEISASDKKKKQEWIQAIHSTIHL 104 (115)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988765
No 17
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.75 E-value=6.4e-18 Score=145.66 Aligned_cols=90 Identities=22% Similarity=0.393 Sum_probs=78.8
Q ss_pred CcceEEEEEe-EcCCCCC-ceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------CCceEEEEEeCc----
Q psy3487 15 DAEMKGWLFK-WTNYLKG-YQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------EDSCTFIISNGV---- 82 (538)
Q Consensus 15 ~~~~~G~L~K-~~~~~k~-Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~~~~~F~i~t~~---- 82 (538)
+++++|||.| .++.+++ ||+|||||.+.+|+|||+++|. +++|.|+|.+..|.+ .++++|+|.++.
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~ek--e~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v 88 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEK--EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNV 88 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTCS--CEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCS
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCccc--ccceEEECCCceEeccCCCCCCCceEEEEECCCCccc
Confidence 4799999999 4677775 9999999999999999999987 999999999999854 346899998754
Q ss_pred ----eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 83 ----QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 83 ----~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
++|.|.|++..|++.|+.+|..|.
T Consensus 89 ~~~h~~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 89 YKDYRQLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp STTCSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred cccceEEEEeCCCHHHHHHHHHHHHhCc
Confidence 599999999999999999996553
No 18
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.75 E-value=8.6e-18 Score=147.81 Aligned_cols=97 Identities=26% Similarity=0.394 Sum_probs=85.6
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceee-ec----CCceEEEEEeCceEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAII-QT----EDSCTFIISNGVQTFH 86 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i-~~----~~~~~F~i~t~~~~~~ 86 (538)
....+.++|||.|+++..+.|++|||||+++.|+||+++.+. .|+|.|+|.+|.+ .+ ..+++|.|.++.++|+
T Consensus 14 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~ 91 (126)
T 1fao_A 14 APSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSP--EPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFY 91 (126)
T ss_dssp -CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCS--SCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEE
T ss_pred CCCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCCC--CceeEEEccceEEEEecccCCCCCEEEEEeCCcEEE
Confidence 456789999999999999999999999999999999999875 8899999999984 32 3468999999999999
Q ss_pred EEeccHHHHHHHHHHhHhhhhhhc
Q psy3487 87 IKASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
|.|+++.|++.|+.+|+.+.....
T Consensus 92 l~a~s~~e~~~Wi~al~~~i~~~~ 115 (126)
T 1fao_A 92 LCAKTGVEADEWIKILRWKLSQIR 115 (126)
T ss_dssp EECSSHHHHHHHHHHHHHHHHTC-
T ss_pred EECCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877643
No 19
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=8.9e-18 Score=149.09 Aligned_cols=97 Identities=22% Similarity=0.421 Sum_probs=80.7
Q ss_pred cCCCCCcceEEEEEeEcCCCCCceEEEEEE-eCCEEEEEecccccCCceeEEEEccc-e----------eeec----CCc
Q psy3487 10 KASHSDAEMKGWLFKWTNYLKGYQKRWFVL-SNGLLSYYRNQAEMSHTCRGTISLRG-A----------IIQT----EDS 73 (538)
Q Consensus 10 ~~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL-~~~~L~Yyk~~~d~~~~~~g~i~L~~-~----------~i~~----~~~ 73 (538)
++..+.+.++|||.|+++..+.||+||||| ++++|+||+++.+. .+.|.|.|.. + .+.+ ..+
T Consensus 2 ~~~~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~--~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~ 79 (130)
T 2d9v_A 2 SSGSSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQ--DEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRD 79 (130)
T ss_dssp TTSCCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTT--SEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTT
T ss_pred CCCCCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCC--CcCceEecccceeEEeccccccccCCCCCCCcC
Confidence 345677899999999999999999999999 79999999999876 6889987763 1 1211 235
Q ss_pred eEEEEEeC-ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 74 CTFIISNG-VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 74 ~~F~i~t~-~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++|.|.+. .++|+|.|+++.|+++|+.+|+.+...
T Consensus 80 ~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 80 GLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp TEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 89999884 599999999999999999999988653
No 20
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.74 E-value=1.6e-17 Score=145.93 Aligned_cols=93 Identities=25% Similarity=0.569 Sum_probs=82.2
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCc-------
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGV------- 82 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~------- 82 (538)
..|.++|||.|++...+.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.++.
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~ 80 (127)
T 1fgy_A 3 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIK 80 (127)
T ss_dssp SSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCC
T ss_pred CCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCCC--CcceEEECCceEEEEccCCCCCceEEEecCCccccccc
Confidence 4678999999999999999999999999999999998765 889999999998743 346899987653
Q ss_pred ---------------eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 83 ---------------QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 83 ---------------~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++|+|+|+++.|++.|+.+|+.+...
T Consensus 81 ~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 81 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp CEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 69999999999999999999988654
No 21
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.3e-17 Score=146.15 Aligned_cols=95 Identities=22% Similarity=0.347 Sum_probs=83.9
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceee-ec-------CCceEEEEEeCce
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAII-QT-------EDSCTFIISNGVQ 83 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i-~~-------~~~~~F~i~t~~~ 83 (538)
....+.++|||.|++...+.|++|||||+++.|+||+++.+. .|+|.|+|.++.. .. ..+++|.|.++.+
T Consensus 10 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r 87 (125)
T 1eaz_A 10 QDSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEK--EPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSR 87 (125)
T ss_dssp --CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCS--SCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSC
T ss_pred CCCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCC--cceeEEEcccceEEeeccccccCCcCCEEEEEeCCc
Confidence 457789999999999999999999999999999999999875 8899999999863 22 3478999999999
Q ss_pred EEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+|+|+|+++.|+++|+.+|+.+...
T Consensus 88 ~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 88 TFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988664
No 22
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.74 E-value=1.2e-17 Score=146.01 Aligned_cols=91 Identities=16% Similarity=0.364 Sum_probs=78.9
Q ss_pred cceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceeeec---C----------CceEEEEEeC
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAIIQT---E----------DSCTFIISNG 81 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i~~---~----------~~~~F~i~t~ 81 (538)
+.++|||.|+++..++|++|||||++++|+||+++++. ...|+|.|+|.+|.|.. + .++.|.|...
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~ 85 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAK 85 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEES
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeC
Confidence 78999999999999999999999999999999998632 24799999999999853 1 4578988765
Q ss_pred c-------eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 82 V-------QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 82 ~-------~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
. +.|+|+|++..|+++|+++|+.+.
T Consensus 86 ~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 86 QNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4 599999999999999999999764
No 23
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.73 E-value=2.7e-17 Score=144.79 Aligned_cols=93 Identities=29% Similarity=0.458 Sum_probs=81.9
Q ss_pred CCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEeCc-e
Q psy3487 13 HSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISNGV-Q 83 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t~~-~ 83 (538)
..++.++|||.|++. ..+.|++|||||+++.|+||+++.+. .|+|.|+|.++.|.. ..+++|.|.++. +
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r 95 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEE--GILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMR 95 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCC--SEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSC
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCc--ccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCC
Confidence 456789999999998 78999999999999999999999876 899999999998742 245799998875 9
Q ss_pred EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+|+|+|+++.|+++|+.+|+.+..
T Consensus 96 ~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 96 TYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999997743
No 24
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=7.3e-18 Score=144.26 Aligned_cols=95 Identities=18% Similarity=0.330 Sum_probs=81.7
Q ss_pred cCCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeC-ceE
Q psy3487 10 KASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNG-VQT 84 (538)
Q Consensus 10 ~~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~-~~~ 84 (538)
+.....+.++|||.|+ ..+.|++|||||+++.|+||+++.+ ...+.+.|+|.+|.|.+ ..+++|.|.++ .++
T Consensus 2 s~~~~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~ 78 (107)
T 2cof_A 2 SSGSSGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEEL 78 (107)
T ss_dssp CCCCCCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTT-CSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEE
T ss_pred CCCCCCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcc-cCCCeeEEeccceEEEECCCCCCCeEEEEEeCCCeE
Confidence 3456778999999999 7789999999999999999999975 34778889999987643 24689999988 789
Q ss_pred EEEEeccHHHHHHHHHHhHhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
|+|+|+++.|+++|+.+|+.+..
T Consensus 79 ~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 79 AKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEECSSHHHHHHHHHHHHHHSS
T ss_pred EEEEcCCHHHHHHHHHHHHHHHc
Confidence 99999999999999999997754
No 25
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.3e-17 Score=142.90 Aligned_cols=97 Identities=25% Similarity=0.401 Sum_probs=83.8
Q ss_pred CCCCcceEEEEEeEcCCC-CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee--cCCceEEEEEeCceEEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYL-KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ--TEDSCTFIISNGVQTFHIK 88 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~-k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~--~~~~~~F~i~t~~~~~~L~ 88 (538)
....+.++|||.|++... +.|++|||||+++.|+||+++.+ .+.+.|.|..+.|. ++.+++|.|.++.++|+|+
T Consensus 6 ~~~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~---~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~ 82 (114)
T 2da0_A 6 SGYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN---RQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQ 82 (114)
T ss_dssp CCCCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC---SCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEE
T ss_pred CCCCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC---CCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEE
Confidence 445688999999999866 99999999999999999999765 35677888887764 3467899999999999999
Q ss_pred eccHHHHHHHHHHhHhhhhhhcc
Q psy3487 89 ASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
|+++.|+.+|+.+|+.+++...+
T Consensus 83 a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 83 AEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998877555
No 26
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.73 E-value=2.1e-17 Score=141.27 Aligned_cols=92 Identities=25% Similarity=0.451 Sum_probs=80.8
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCC--EEEEEecccccCCceeEEEEccceeeec---C-------CceEEEEEe
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNG--LLSYYRNQAEMSHTCRGTISLRGAIIQT---E-------DSCTFIISN 80 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~--~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~-------~~~~F~i~t 80 (538)
...+.++|||.|++...+.|++|||||.++ .|+||+++.+. .|+|.|+|.+|.|.. . .+++|.|.+
T Consensus 4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~ 81 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAE--DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT 81 (109)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCS--SCSEEEECTTCEEEEECC--------CCSEEEEEC
T ss_pred cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCC--CccEEEECCCCEEEEccCCcccccCCCceEEEEEe
Confidence 467899999999999999999999999976 99999998765 889999999988632 1 468999998
Q ss_pred Cc-eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 81 GV-QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 81 ~~-~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
+. ++|+|+|+++.|+++|+.+|+.+.
T Consensus 82 ~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 82 ADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 86 679999999999999999999875
No 27
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.1e-17 Score=142.36 Aligned_cols=93 Identities=25% Similarity=0.492 Sum_probs=81.4
Q ss_pred CCcceEEEEEeEcCCC----CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec--------CCceEEEEEeC
Q psy3487 14 SDAEMKGWLFKWTNYL----KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT--------EDSCTFIISNG 81 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~----k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~--------~~~~~F~i~t~ 81 (538)
+.+.++|||.|++... +.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.++
T Consensus 1 g~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~ 78 (108)
T 1u5d_A 1 GSVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSK--QPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQ 78 (108)
T ss_dssp CCEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEECGGGCSSGGGGGEEEEECS
T ss_pred CCccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCC--CCCEEEEecceEEEeCCccccccCCcceEEEEcC
Confidence 3578999999998532 899999999999999999999865 889999999999643 13589999998
Q ss_pred c-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 82 V-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 82 ~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
. ++|+|+|+++.|++.|+.+|+.+.+.
T Consensus 79 ~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 79 DRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 7 99999999999999999999988764
No 28
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.73 E-value=2.3e-17 Score=142.05 Aligned_cols=91 Identities=24% Similarity=0.464 Sum_probs=78.0
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEE-eCCEEEEEecccccCCceeEEEEccceeee-----------c-C--C-ceEEE
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVL-SNGLLSYYRNQAEMSHTCRGTISLRGAIIQ-----------T-E--D-SCTFI 77 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL-~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~-----------~-~--~-~~~F~ 77 (538)
..+.++|||.|++...+.|++||||| .++.|+||+++.+. .+.|.|+|....|. + + . +++|.
T Consensus 3 ~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~--~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~ 80 (112)
T 3aj4_A 3 MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQ--NIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQ 80 (112)
T ss_dssp CSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCC--SEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEE
T ss_pred cceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCC--CCCccccccccceeecccccccccCCCCCCCcCcEEE
Confidence 45789999999999999999999999 89999999999876 78899998864421 1 1 1 47999
Q ss_pred EEeC-ceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 78 ISNG-VQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 78 i~t~-~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
|.++ .++|+|+|+|+.|+++|+.+|+.+.
T Consensus 81 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 81 IVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp EEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9865 7999999999999999999999875
No 29
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.72 E-value=2.9e-17 Score=145.08 Aligned_cols=93 Identities=23% Similarity=0.398 Sum_probs=76.4
Q ss_pred CcceEEEEEeEc-CCCCCceEEEEEEe---CCEEEEEecccc--cCCceeEEEEccce-eeec-------CCceEEEEEe
Q psy3487 15 DAEMKGWLFKWT-NYLKGYQKRWFVLS---NGLLSYYRNQAE--MSHTCRGTISLRGA-IIQT-------EDSCTFIISN 80 (538)
Q Consensus 15 ~~~~~G~L~K~~-~~~k~Wk~RwFvL~---~~~L~Yyk~~~d--~~~~~~g~i~L~~~-~i~~-------~~~~~F~i~t 80 (538)
...++|||.|++ ...+.|+||||||+ +..|+||+++.+ ....|+|.|+|..+ .|.. ..+++|.|.+
T Consensus 14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t 93 (126)
T 1v5p_A 14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINA 93 (126)
T ss_dssp CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEEC
T ss_pred CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEEC
Confidence 345789999998 68899999999999 668888898421 12489999999984 4532 2247999999
Q ss_pred CceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+.++|+|+|+|+.|+++||++|+.+.+
T Consensus 94 ~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 94 LSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998754
No 30
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.72 E-value=3.3e-17 Score=143.21 Aligned_cols=93 Identities=28% Similarity=0.504 Sum_probs=81.7
Q ss_pred CCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC-------CceEEEEEeCc-eE
Q psy3487 14 SDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE-------DSCTFIISNGV-QT 84 (538)
Q Consensus 14 ~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~-------~~~~F~i~t~~-~~ 84 (538)
.++.++|||.|++. ..+.|++|||||+++.|+||+++.+. .|+|.|+|.++.|... .+++|.|.+++ ++
T Consensus 9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~--~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~ 86 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREE--SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT 86 (123)
T ss_dssp SCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCC--SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCC
T ss_pred CCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCc--ccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeE
Confidence 34789999999985 78999999999999999999999876 8899999999998542 36899998876 99
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|.|+++.|+..|+.+|+.+...
T Consensus 87 ~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 87 YVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988654
No 31
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=6.3e-17 Score=140.06 Aligned_cols=93 Identities=31% Similarity=0.591 Sum_probs=80.5
Q ss_pred CCCcceEEEEEeEc-CCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEe-Cce
Q psy3487 13 HSDAEMKGWLFKWT-NYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISN-GVQ 83 (538)
Q Consensus 13 ~~~~~~~G~L~K~~-~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t-~~~ 83 (538)
..++.++|||.|++ ...+.|++|||||.++.|+||+++.+. .|+|.|+|.++.|.. ..+++|.|.+ +.+
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r 85 (117)
T 2d9y_A 8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEE--SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR 85 (117)
T ss_dssp SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCC--SCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSC
T ss_pred CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCC--CcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCc
Confidence 35678999999998 478999999999999999999999876 889999999988632 2357999965 559
Q ss_pred EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+|+|+|+++.|+++|+.+|+.+..
T Consensus 86 ~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 86 TYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998754
No 32
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=8.8e-17 Score=140.30 Aligned_cols=92 Identities=32% Similarity=0.593 Sum_probs=79.6
Q ss_pred CCcceEEEEEeEc-CCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec-------CCceEEEEEe-CceE
Q psy3487 14 SDAEMKGWLFKWT-NYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-------EDSCTFIISN-GVQT 84 (538)
Q Consensus 14 ~~~~~~G~L~K~~-~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-------~~~~~F~i~t-~~~~ 84 (538)
.++.++|||.|++ ...+.|++|||||+++.|+||+++.+. .|+|.|+|.++.|.. ..+++|.|.+ +.++
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 97 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEE--SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT 97 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCC--SCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCE
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCC--CcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcE
Confidence 4578999999998 478999999999999999999999876 789999999987632 2357999965 4699
Q ss_pred EEEEeccHHHHHHHHHHhHhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
|+|+|+++.|+++|+.+|+.+..
T Consensus 98 ~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 98 YFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999998753
No 33
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=147.21 Aligned_cols=96 Identities=24% Similarity=0.339 Sum_probs=72.9
Q ss_pred CCcceEEEEEeE-cC-CCCCceEEEEEEeC-CEEEEEecccccC---------------CceeEEEEccceeee------
Q psy3487 14 SDAEMKGWLFKW-TN-YLKGYQKRWFVLSN-GLLSYYRNQAEMS---------------HTCRGTISLRGAIIQ------ 69 (538)
Q Consensus 14 ~~~~~~G~L~K~-~~-~~k~Wk~RwFvL~~-~~L~Yyk~~~d~~---------------~~~~g~i~L~~~~i~------ 69 (538)
..|.++|||.|+ ++ ..++|++|||||++ +.|+||+++.|.. ..|.|.|+|.++.+.
T Consensus 2 ~~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 2 AIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CCEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred CcceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 467899999999 54 67999999999995 8999998743310 123344444444332
Q ss_pred ----cCCceEEEEEeCc-eEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 70 ----TEDSCTFIISNGV-QTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 70 ----~~~~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
.+.+++|.|.++. ++|+|+|+|+.|+++||.+|+.++..+
T Consensus 82 ~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 82 AGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp CSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 1356899999887 999999999999999999999887653
No 34
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.71 E-value=4.5e-17 Score=144.43 Aligned_cols=101 Identities=21% Similarity=0.351 Sum_probs=81.3
Q ss_pred CCCCCcceEEEEEeE-----cC-CCCCceEEEEEEeCCEEEEEeccccc---------CCceeEEEEccceeeec-----
Q psy3487 11 ASHSDAEMKGWLFKW-----TN-YLKGYQKRWFVLSNGLLSYYRNQAEM---------SHTCRGTISLRGAIIQT----- 70 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~-----~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~---------~~~~~g~i~L~~~~i~~----- 70 (538)
..+.++.++|||.|+ |. ..+.|++|||||+++.|+||+++.+. ...|.|.|+|.+|.+..
T Consensus 7 ~~~~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~ 86 (129)
T 2p0d_A 7 VGSHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLS 86 (129)
T ss_dssp --CCSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSC
T ss_pred CCCcceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCC
Confidence 345688999999986 32 34899999999999999999999521 24789999999999752
Q ss_pred CCceEEEEEeCc-eEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 71 EDSCTFIISNGV-QTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 71 ~~~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
..+++|.|.++. ++|+|+|+++.|+++||.+|+.++....|
T Consensus 87 kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 87 SRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 235899998875 78999999999999999999998876544
No 35
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.71 E-value=5.8e-17 Score=143.08 Aligned_cols=95 Identities=24% Similarity=0.430 Sum_probs=82.9
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCC--EEEEEecccccCCceeEEEEccceeeec---C-------CceEEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNG--LLSYYRNQAEMSHTCRGTISLRGAIIQT---E-------DSCTFIIS 79 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~--~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~-------~~~~F~i~ 79 (538)
....+.++|||.|++...+.|++|||||.++ +|+||+++.+. .|+|.|+|.+|.|.. . .+++|.|.
T Consensus 14 ~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~ 91 (129)
T 1x05_A 14 FRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAE--DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEII 91 (129)
T ss_dssp TCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCS--SCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEE
T ss_pred ccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCC--cceeEEEccCCEEEEccCCccccccCCCeEEEEE
Confidence 4567899999999999999999999999965 99999998765 889999999988642 1 46899999
Q ss_pred eCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 80 NGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 80 t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++. ++|+|+|+++.|+++|+.+|+.+...
T Consensus 92 ~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 92 TADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp CTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 875 77999999999999999999988654
No 36
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.71 E-value=7.1e-17 Score=149.90 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=77.9
Q ss_pred CcceEEEEEeEcC-----CCCCceEEEEEEeCCEEEEEecc----cccCCceeEEEEccceeee------cCC----c--
Q psy3487 15 DAEMKGWLFKWTN-----YLKGYQKRWFVLSNGLLSYYRNQ----AEMSHTCRGTISLRGAIIQ------TED----S-- 73 (538)
Q Consensus 15 ~~~~~G~L~K~~~-----~~k~Wk~RwFvL~~~~L~Yyk~~----~d~~~~~~g~i~L~~~~i~------~~~----~-- 73 (538)
.+.++|||.|++. ..++||+|||||+++.|+||+++ .+ ..++|.|+|.++.+. ++. .
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~--~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~ 79 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRR--GSKKGSIDVEKITCVETVVPEKNPPPERQIP 79 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEE--EEEEEEEEGGGEEEEEECCCCSSCCGGGCC-
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCC--CceeeEEECcceEEEEeccCCCCcchhcccc
Confidence 4689999999874 25789999999999999999984 44 489999999998632 111 1
Q ss_pred -------------------eEEEEEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 74 -------------------CTFIISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 74 -------------------~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++|.|.++.++|+|.|+|+.|+++||++|+.+...
T Consensus 80 ~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 80 RRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp --------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred cccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999988765
No 37
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.70 E-value=1.5e-17 Score=146.15 Aligned_cols=94 Identities=23% Similarity=0.424 Sum_probs=79.2
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEe-CCEEEEEecccccCCceeEEEEccceeee--------cCCceEEEEEe---
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLS-NGLLSYYRNQAEMSHTCRGTISLRGAIIQ--------TEDSCTFIISN--- 80 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~-~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~--------~~~~~~F~i~t--- 80 (538)
.+.+.++|||.|++...++|++|||||+ ++.|+||+++.+. .++|.|+|..+.+. ...+++|.|.+
T Consensus 5 ~~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~--~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~ 82 (125)
T 1unq_A 5 DVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 82 (125)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCS--HHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEET
T ss_pred CCCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCC--CCCceeEccceeEEeeeecccccCCCCEEEEEecCC
Confidence 4668899999999999999999999999 5799999998765 66777777776532 13568999985
Q ss_pred -CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 81 -GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 81 -~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+.++|+|+|+++.|+.+|+.+|+.+...
T Consensus 83 ~~~~~~~~~a~s~~e~~~Wi~al~~~~~~ 111 (125)
T 1unq_A 83 TTVIERTFHVETPEEREEWTTAIQTVADG 111 (125)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 4589999999999999999999988654
No 38
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.70 E-value=4.5e-17 Score=144.67 Aligned_cols=95 Identities=23% Similarity=0.402 Sum_probs=80.1
Q ss_pred CCcceEEEEEeE--cCCCCCceEEEEEEeCCEEEEEecccc-cCCceeEEEEcccee---eec------CCceEEEEEe-
Q psy3487 14 SDAEMKGWLFKW--TNYLKGYQKRWFVLSNGLLSYYRNQAE-MSHTCRGTISLRGAI---IQT------EDSCTFIISN- 80 (538)
Q Consensus 14 ~~~~~~G~L~K~--~~~~k~Wk~RwFvL~~~~L~Yyk~~~d-~~~~~~g~i~L~~~~---i~~------~~~~~F~i~t- 80 (538)
..+.++|||.|+ ++..+.|++|||||+++.|+||+++.| ....|+|.|+|.+|. |.+ ..+++|.|.+
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~ 82 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELITV 82 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEE
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEec
Confidence 467899999999 788899999999999999999998764 235899999999987 432 2468999876
Q ss_pred -Cc------------------eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 81 -GV------------------QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 81 -~~------------------~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+. ++|+|+|+++.|+..|+.+|+.+...
T Consensus 83 ~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 83 RPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 22 47999999999999999999988654
No 39
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.70 E-value=5.3e-17 Score=142.98 Aligned_cols=97 Identities=15% Similarity=0.354 Sum_probs=78.0
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc-------CCceeEEEEccceeeec------CCceEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM-------SHTCRGTISLRGAIIQT------EDSCTFII 78 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~-------~~~~~g~i~L~~~~i~~------~~~~~F~i 78 (538)
+...+.++|||.|++...+.|++|||||.++.|+||+++.+. ...++|.|+|.+|.|.. ..+++|.|
T Consensus 8 ~~~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I 87 (124)
T 2w2x_D 8 KKDEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFIL 87 (124)
T ss_dssp -----CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEE
T ss_pred hhhhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEE
Confidence 345678999999999999999999999999999999986431 13458999999999743 24589999
Q ss_pred EeCc---eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 79 SNGV---QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 79 ~t~~---~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.++. ++|+|.|+++.|+++||.+|+.+...
T Consensus 88 ~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 88 EPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp EECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 8753 68999999999999999999987654
No 40
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.70 E-value=1.4e-16 Score=144.33 Aligned_cols=96 Identities=21% Similarity=0.402 Sum_probs=82.5
Q ss_pred CCCCcceEEEEEeEcCC----CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------C--CceEEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNY----LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------E--DSCTFIIS 79 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~----~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~--~~~~F~i~ 79 (538)
....+.++|||.|++.. .+.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. + .+++|.|.
T Consensus 13 ~~~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~--~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~ 90 (148)
T 1u5f_A 13 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDK--QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC 90 (148)
T ss_dssp GCSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEECTTSCSSTTGGGEEEEE
T ss_pred hCCCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCc--ccceEEEcCCcEEEECCCcccCCCCccEEEEE
Confidence 45678999999999864 3699999999999999999999875 789999999999752 1 25899999
Q ss_pred eCc-eEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 80 NGV-QTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 80 t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
++. ++|+|+|+++.|++.|+.+|+.+....
T Consensus 91 ~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 91 APDKRIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp CTTSCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 986 999999999999999999999886543
No 41
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.69 E-value=1e-16 Score=138.57 Aligned_cols=89 Identities=22% Similarity=0.318 Sum_probs=75.1
Q ss_pred eEEEEEeEcC----CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee-------cCCceEEEEEe-CceEE
Q psy3487 18 MKGWLFKWTN----YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ-------TEDSCTFIISN-GVQTF 85 (538)
Q Consensus 18 ~~G~L~K~~~----~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~-------~~~~~~F~i~t-~~~~~ 85 (538)
++|||.|+++ ..+.|++|||||+++.|+||+++.+. .|.|.|+|.++.+. ...+++|.|.+ +.++|
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~--~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y 79 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDV--IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCL 79 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCC--SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCC--CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEE
Confidence 7999997744 67899999999999999999999866 78899999976432 13579999985 46899
Q ss_pred EEEeccHHHHHHHHHHhHhhhhh
Q psy3487 86 HIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 86 ~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+|+|+|+.|+++||.+|+.+...
T Consensus 80 ~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 80 ELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEcCCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999987654
No 42
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.69 E-value=5.8e-17 Score=147.06 Aligned_cols=95 Identities=21% Similarity=0.420 Sum_probs=82.9
Q ss_pred CCCCcceEEEEEeEc------CCCCCceEEEEEEeCC-----EEEEEeccc-ccCCceeEEEEccceeeec----CCceE
Q psy3487 12 SHSDAEMKGWLFKWT------NYLKGYQKRWFVLSNG-----LLSYYRNQA-EMSHTCRGTISLRGAIIQT----EDSCT 75 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~------~~~k~Wk~RwFvL~~~-----~L~Yyk~~~-d~~~~~~g~i~L~~~~i~~----~~~~~ 75 (538)
....+.++|||.|++ ...+.|++|||||+++ .|.||+++. +. .|+|.|+|.+|.+.. ..+++
T Consensus 14 ~~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~--~~~g~I~L~~~~~~~~~~~~~~~~ 91 (150)
T 1wg7_A 14 QKGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISK--EPKGSIFLDSCMGVVQNNKVRRFA 91 (150)
T ss_dssp CSCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSS--CCSEEECTTTCCEECCCCSSCTTE
T ss_pred CCCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCC--CcCcEEecccCEEEecCCCCCceE
Confidence 457789999999998 4568999999999986 999999987 44 789999999998753 35689
Q ss_pred EEEEeCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 76 FIISNGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 76 F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|.|.++. ++|+|+|+++.|+..|+.+|+.+...
T Consensus 92 F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 92 FELKMQDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 9999985 89999999999999999999988654
No 43
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=146.41 Aligned_cols=98 Identities=22% Similarity=0.372 Sum_probs=82.0
Q ss_pred CCCcceEEEEEeEcCC-----CCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee---c--------CCceEE
Q psy3487 13 HSDAEMKGWLFKWTNY-----LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ---T--------EDSCTF 76 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~-----~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~---~--------~~~~~F 76 (538)
...+++||||.|++.. .+.||+|||||+++.|+||+++.+. ..++|.|+|..+... . ...+.|
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~-~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f 90 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK-KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPF 90 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS-CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEE
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc-cccccEEEEeeeEEEEeccccccCcccccceeE
Confidence 4568999999999863 3469999999999999999988654 467899999987632 1 134789
Q ss_pred EEEeCceEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 77 IISNGVQTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 77 ~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
.|.++.++|+|.|+|+.|+++||++|+.+......
T Consensus 91 ~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 91 QVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp EEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSC
T ss_pred EEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChh
Confidence 99999999999999999999999999998876544
No 44
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.68 E-value=1.2e-16 Score=140.10 Aligned_cols=99 Identities=20% Similarity=0.334 Sum_probs=81.3
Q ss_pred cCCCCCcceEEEEEeEcCC--------CCCceEEEEEEeCCEEEEEecccccCC----ceeEEEEccceeeec-----CC
Q psy3487 10 KASHSDAEMKGWLFKWTNY--------LKGYQKRWFVLSNGLLSYYRNQAEMSH----TCRGTISLRGAIIQT-----ED 72 (538)
Q Consensus 10 ~~~~~~~~~~G~L~K~~~~--------~k~Wk~RwFvL~~~~L~Yyk~~~d~~~----~~~g~i~L~~~~i~~-----~~ 72 (538)
+...+++.++|||.|++.. .+.|++|||||+++.|+||+++.+... .+...|+|.+|.+.. ..
T Consensus 2 ~~~~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r 81 (123)
T 1wjm_A 2 SSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKR 81 (123)
T ss_dssp CSCCCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSC
T ss_pred CCCCCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCC
Confidence 3456778999999998764 889999999999999999999876421 234578998876532 35
Q ss_pred ceEEEEEeCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 73 SCTFIISNGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 73 ~~~F~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+++|.|.++. ++|+|+|+++.|+++||.+|+.+...
T Consensus 82 ~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 82 KHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp SSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 7899998776 89999999999999999999988654
No 45
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.68 E-value=8.1e-17 Score=142.07 Aligned_cols=94 Identities=28% Similarity=0.450 Sum_probs=81.1
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEe--CCEEEEEecc-cccCCceeEEEEccceeeec---C----------CceEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLS--NGLLSYYRNQ-AEMSHTCRGTISLRGAIIQT---E----------DSCTF 76 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~--~~~L~Yyk~~-~d~~~~~~g~i~L~~~~i~~---~----------~~~~F 76 (538)
...+.++|||.|++...+.|++|||||+ ++.|+||+++ .+. .|+|.|+|.+|.|.. . .+++|
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~--~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F 92 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEEN--RPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLF 92 (129)
T ss_dssp CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCS--SCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCE
T ss_pred CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCC--ccceEEECcCCEEEEeCCCCCcccccCCCCCceE
Confidence 4578999999999999999999999999 3799999987 444 789999999987632 1 36899
Q ss_pred EEEeCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 77 IISNGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 77 ~i~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.++. ++|+|+|+++.|+++|+.+|+.+...
T Consensus 93 ~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 93 KVITKDDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp EECCTTCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred EEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 999887 68999999999999999999988643
No 46
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.68 E-value=1.7e-16 Score=134.82 Aligned_cols=88 Identities=18% Similarity=0.387 Sum_probs=74.6
Q ss_pred eEEEEEeEc--------CCCCCceEEEEEEeCCEEEEEeccccc----CCceeEEEEccceeeec-----CCceEEEEEe
Q psy3487 18 MKGWLFKWT--------NYLKGYQKRWFVLSNGLLSYYRNQAEM----SHTCRGTISLRGAIIQT-----EDSCTFIISN 80 (538)
Q Consensus 18 ~~G~L~K~~--------~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----~~~~~g~i~L~~~~i~~-----~~~~~F~i~t 80 (538)
++|||.|++ ...+.|++|||||+++.|+||+++.+. ...+.+.|+|.++.+.. ..+++|.|.+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~ 80 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL 80 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEEC
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEe
Confidence 689999998 688999999999999999999998742 22467889998877532 2478999987
Q ss_pred Cc-eEEEEEeccHHHHHHHHHHhHhh
Q psy3487 81 GV-QTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 81 ~~-~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
+. ++|+|+|+|+.|+++|+.+|+.|
T Consensus 81 ~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 81 SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 65 99999999999999999999864
No 47
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.66 E-value=4.3e-16 Score=149.74 Aligned_cols=95 Identities=21% Similarity=0.420 Sum_probs=82.8
Q ss_pred CCCCcceEEEEEeEcC----CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------C--CceEEEEE
Q psy3487 12 SHSDAEMKGWLFKWTN----YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------E--DSCTFIIS 79 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~----~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~--~~~~F~i~ 79 (538)
....+.++|||.|++. ..+.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. + .+++|.|.
T Consensus 102 ~l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~--~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~ 179 (211)
T 1u5e_A 102 DLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDK--QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEIC 179 (211)
T ss_dssp GCSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEECGGGCSSTTGGGEEEEE
T ss_pred hcCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCc--cceEEEEeCCcEEEEcCCccccCCCCCEEEEE
Confidence 3456899999999986 46899999999999999999999875 789999999999743 1 25899999
Q ss_pred eCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 80 NGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 80 t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++. ++|+|+|+++.|++.|+.+|+.+...
T Consensus 180 t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 180 APDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp CSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 875 99999999999999999999988653
No 48
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=3.1e-16 Score=137.43 Aligned_cols=97 Identities=24% Similarity=0.424 Sum_probs=82.7
Q ss_pred cCCCCCcceEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecCC-----ceEEEEEeC
Q psy3487 10 KASHSDAEMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTED-----SCTFIISNG 81 (538)
Q Consensus 10 ~~~~~~~~~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~~-----~~~F~i~t~ 81 (538)
+.+...|++.+||...+. .+|+||+|||||+|+.|+|||+++|...+|.|.|+|.+|+|.++. ++.|.+..+
T Consensus 3 ~~~~~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iP 82 (137)
T 2ys3_A 3 SGSSGIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVP 82 (137)
T ss_dssp CCSCSCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEE
T ss_pred CccCCCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEECCCCEEeccccccCCceEEEEEcc
Confidence 346677999999998765 678999999999999999999999876789999999999998773 345545443
Q ss_pred ----ceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 82 ----VQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 82 ----~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.++|+|+|+|+.++++||.+++.|.
T Consensus 83 s~~g~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 83 SPEGMSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp CSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999999875
No 49
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.64 E-value=8e-16 Score=149.73 Aligned_cols=95 Identities=28% Similarity=0.496 Sum_probs=85.5
Q ss_pred CCCCcceEEEEEeEcCCC-----CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec---CCceEEEEEeCce
Q psy3487 12 SHSDAEMKGWLFKWTNYL-----KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT---EDSCTFIISNGVQ 83 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~-----k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~~ 83 (538)
+.+++.++|||.|++... +.|++|||||+++.|+||+++.+. .|+|.|+|.++.+.. ..+++|.|.++.+
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~--~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r 131 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEE--KLKGTVEVRSAKEIIDNTNKENGIDIIMADR 131 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCC--SEEEEEEGGGCSEEEEETTTTSEEEEECSSC
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCc--ceeEEEEcCCCEEeccCCCCCcEEEEEcCCc
Confidence 467789999999999865 899999999999999999999875 899999999998632 4578999999999
Q ss_pred EEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 84 TFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 84 ~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+|+|+|+++.|+++|+.+|+.+...
T Consensus 132 ~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 132 TFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999988764
No 50
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.63 E-value=7.1e-16 Score=142.69 Aligned_cols=94 Identities=15% Similarity=0.333 Sum_probs=67.7
Q ss_pred CcceEEEEE----------eEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccc--eee--ec---CCceEEE
Q psy3487 15 DAEMKGWLF----------KWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRG--AII--QT---EDSCTFI 77 (538)
Q Consensus 15 ~~~~~G~L~----------K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~--~~i--~~---~~~~~F~ 77 (538)
.+.++|||. |++...+.|++|||||+++.|+||+++.+....+.|.|+|.. |.+ .+ ..+++|.
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~ 81 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFR 81 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEE
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCEEE
Confidence 468999999 666788999999999999999999999764346789888776 443 22 3578999
Q ss_pred EEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 78 ISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 78 i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|.++.++|+|+|+++.|+++||.+|+.+...
T Consensus 82 I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 82 LTTSDCECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp EECSSCEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred EEeCCceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987653
No 51
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.60 E-value=4.9e-15 Score=153.00 Aligned_cols=93 Identities=25% Similarity=0.565 Sum_probs=82.6
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeC--------
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNG-------- 81 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~-------- 81 (538)
..|.++|||.|++...+.|++|||||++++|+||+++.+. .|+|.|+|.+|.|.. ..+++|.|.++
T Consensus 211 ~~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~~--~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~ 288 (347)
T 2r09_A 211 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK--EPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIK 288 (347)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCS--SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCC
T ss_pred cccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCcc--CCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccc
Confidence 4578999999999999999999999999999999999875 889999999998743 35789999865
Q ss_pred --------------ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 82 --------------VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 82 --------------~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.++|+|+|+++.|+.+|+.+|+.+...
T Consensus 289 ~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~ 329 (347)
T 2r09_A 289 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 329 (347)
T ss_dssp CEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 379999999999999999999988654
No 52
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.59 E-value=1.3e-15 Score=133.53 Aligned_cols=98 Identities=16% Similarity=0.343 Sum_probs=79.7
Q ss_pred CCCCCcceEEEEEeEcC--------CCCCceEEEEEEeCCEEEEEecccccCC------ceeEEEEccceeeec-----C
Q psy3487 11 ASHSDAEMKGWLFKWTN--------YLKGYQKRWFVLSNGLLSYYRNQAEMSH------TCRGTISLRGAIIQT-----E 71 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~--------~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~------~~~g~i~L~~~~i~~-----~ 71 (538)
+-+.++.++|||.|+.. ..+.|++|||||+++.|+||+++.+... .+.+.|+|.+|.+.. .
T Consensus 3 ~~~~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~k 82 (122)
T 1dro_A 3 GTGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTK 82 (122)
T ss_dssp SCCSSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSS
T ss_pred CCCCceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCC
Confidence 34567889999998753 4688999999999999999999976521 224789999887642 2
Q ss_pred CceEEEEEe-CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 72 DSCTFIISN-GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 72 ~~~~F~i~t-~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.+++|.|.+ +.++|+|+|+++.|+++|+.+|+.+.+.
T Consensus 83 r~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 83 KKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp STTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 468999986 5699999999999999999999988654
No 53
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.58 E-value=4.8e-15 Score=147.11 Aligned_cols=97 Identities=23% Similarity=0.446 Sum_probs=79.0
Q ss_pred CCCCcceEEEEE--------eEcCC----CCCceEEEEEEeCCEEEEEeccc----ccCCceeEEEEccceeeec-----
Q psy3487 12 SHSDAEMKGWLF--------KWTNY----LKGYQKRWFVLSNGLLSYYRNQA----EMSHTCRGTISLRGAIIQT----- 70 (538)
Q Consensus 12 ~~~~~~~~G~L~--------K~~~~----~k~Wk~RwFvL~~~~L~Yyk~~~----d~~~~~~g~i~L~~~~i~~----- 70 (538)
..+.+.++|||. |+++. .+.|++|||||+++.|+||+++. +....|.|.|+|.+|.|..
T Consensus 7 ~~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~ 86 (263)
T 3a8p_A 7 EQGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHP 86 (263)
T ss_dssp ---CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCS
T ss_pred cCCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCC
Confidence 456789999999 55655 88999999999999999999863 1234789999999988742
Q ss_pred CCceEEEEEe-CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 71 EDSCTFIISN-GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 71 ~~~~~F~i~t-~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
..+++|.|.+ +.++|+|+|+|+.|+++|+.+|+.+...
T Consensus 87 kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~ 125 (263)
T 3a8p_A 87 KKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACAS 125 (263)
T ss_dssp SCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 2478999998 5799999999999999999999987654
No 54
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.58 E-value=6.7e-15 Score=153.96 Aligned_cols=94 Identities=19% Similarity=0.402 Sum_probs=82.0
Q ss_pred CCCcceEEEEEeEcCCC-CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceee----e---cC---C---ceEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYL-KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAII----Q---TE---D---SCTFII 78 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~-k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i----~---~~---~---~~~F~i 78 (538)
...+.++|||.|++... ++||+|||||+++.|+||+++.+. .|+|.|+|..+.. . +. . +++|.|
T Consensus 266 ~~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~--~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I 343 (386)
T 3lju_X 266 SRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDA--FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITI 343 (386)
T ss_dssp SCCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTCS--BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEE
T ss_pred ccccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCCc--ccceEEEeecceeeeeecccCCccccccCCCcEEEE
Confidence 45678999999999877 999999999999999999999876 8899999976542 1 21 1 488999
Q ss_pred EeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 79 SNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 79 ~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.++.++|+|.|+++.|+++|+.+|+.+.+.
T Consensus 344 ~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 344 VTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp ECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred EeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988765
No 55
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.57 E-value=1.9e-14 Score=126.02 Aligned_cols=92 Identities=23% Similarity=0.359 Sum_probs=77.7
Q ss_pred ceEEEEEeE-----cCC--CCCceEEEEEEeCCEEEEEeccc-------ccCCceeEEEEccceeeec----CCceEEEE
Q psy3487 17 EMKGWLFKW-----TNY--LKGYQKRWFVLSNGLLSYYRNQA-------EMSHTCRGTISLRGAIIQT----EDSCTFII 78 (538)
Q Consensus 17 ~~~G~L~K~-----~~~--~k~Wk~RwFvL~~~~L~Yyk~~~-------d~~~~~~g~i~L~~~~i~~----~~~~~F~i 78 (538)
.++|+|.++ |+. .+.|++|||||.+++|+||+.+. +.+.+|.|.|+|.++.|.. ..+++|.|
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L 81 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPEHPDIFQL 81 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTTSTTEEEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCCCCCCCEEEE
Confidence 588999964 553 68999999999999999999662 2235899999999999853 35689999
Q ss_pred EeC--ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 79 SNG--VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 79 ~t~--~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.++ +.+|.|+|++..++..|+++|..+++.
T Consensus 82 ~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~ 113 (126)
T 2dtc_A 82 NNPDKGNVYKFQTGSRFHAILWHKHLDDACKS 113 (126)
T ss_dssp ECTTSCSEEEEECSSHHHHHHHHHHHHHHHTS
T ss_pred eeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhc
Confidence 975 589999999999999999999998764
No 56
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.57 E-value=5e-15 Score=146.98 Aligned_cols=95 Identities=28% Similarity=0.455 Sum_probs=77.5
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCC-------EEEEEecccccC---CceeEEEEcccee-eec----CCceEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNG-------LLSYYRNQAEMS---HTCRGTISLRGAI-IQT----EDSCTF 76 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~-------~L~Yyk~~~d~~---~~~~g~i~L~~~~-i~~----~~~~~F 76 (538)
....+.++|||.|+ |.||+|||||+++ .|+||+++++.. ..|+|.|+|..|. |.+ ..+++|
T Consensus 6 ~~~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F 81 (264)
T 1qqg_A 6 GFSDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLV 81 (264)
T ss_dssp ---CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEE
T ss_pred CCCCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEE
Confidence 45678999999998 7999999999987 999999998611 2689999999987 422 346899
Q ss_pred EEEeCceEEEEEeccHHHHHHHHHHhHhhhhhhc
Q psy3487 77 IISNGVQTFHIKASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 77 ~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
.|.++.++|+|.|+++.|+++|+.+|+.+.....
T Consensus 82 ~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 82 ALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp EEEESSCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred EEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999998766543
No 57
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.55 E-value=3e-14 Score=126.31 Aligned_cols=95 Identities=19% Similarity=0.357 Sum_probs=76.1
Q ss_pred CCCcceEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC-----CceEEEEEeC---
Q psy3487 13 HSDAEMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE-----DSCTFIISNG--- 81 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~-----~~~~F~i~t~--- 81 (538)
...|++.+||...+. .+|+||+||||++|..|+|||+++|....|.+.|+|+||+|.++ .++.|.+..+
T Consensus 23 t~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~ 102 (165)
T 4bbk_A 23 TDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVAD 102 (165)
T ss_dssp ---CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETT
T ss_pred ccChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEecccccccceeeEEEecCCCC
Confidence 556889999987543 78999999999999999999999998889999999999999865 3344554333
Q ss_pred -ceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 82 -VQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 82 -~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
...++|+|+++.++.+|+.+++.|..
T Consensus 103 gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 103 GMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceeeeeecCCHHHHHHHHHHhhhccc
Confidence 37999999999999999999998755
No 58
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.54 E-value=3.7e-14 Score=127.12 Aligned_cols=95 Identities=23% Similarity=0.450 Sum_probs=79.6
Q ss_pred CCCcceEEEEEeEcC---CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC---Cc--eEEEEEe----
Q psy3487 13 HSDAEMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE---DS--CTFIISN---- 80 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~---~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~---~~--~~F~i~t---- 80 (538)
...|++.+||..... .+|+||+||||++|+.|+|||+++|....|.|.|+|+||+|.++ .. +.|.+..
T Consensus 44 t~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~ 123 (173)
T 4f7h_A 44 TSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAE 123 (173)
T ss_dssp GGTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETT
T ss_pred hcChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEeccccccccceeEEEeccCCC
Confidence 456889999987543 78999999999999999999999998889999999999999864 23 3343332
Q ss_pred CceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 81 GVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 81 ~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+...++|+|+++.++.+|+.+++.|..
T Consensus 124 gm~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 124 GMNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CcceeeeecCCHHHHHHHHHHhhhhcc
Confidence 348999999999999999999998754
No 59
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.54 E-value=4.8e-14 Score=123.98 Aligned_cols=96 Identities=19% Similarity=0.334 Sum_probs=76.1
Q ss_pred CCCCcceEEEEEeE-----cC--CCCCceEEEEEEeCCEEEEEecccccC----------CceeEEEEccceeeec---C
Q psy3487 12 SHSDAEMKGWLFKW-----TN--YLKGYQKRWFVLSNGLLSYYRNQAEMS----------HTCRGTISLRGAIIQT---E 71 (538)
Q Consensus 12 ~~~~~~~~G~L~K~-----~~--~~k~Wk~RwFvL~~~~L~Yyk~~~d~~----------~~~~g~i~L~~~~i~~---~ 71 (538)
.+..+.++|||.|+ +. ..+.|++|||||+++.|+||+++.+.. ..|.+.|+|.+|.+.. +
T Consensus 4 ~~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d 83 (124)
T 3pp2_A 4 RTKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKD 83 (124)
T ss_dssp -----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGG
T ss_pred cCCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecccc
Confidence 35678999999986 22 335899999999999999999887642 2588999999988643 2
Q ss_pred ---CceEEEEEeC-ceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 72 ---DSCTFIISNG-VQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 72 ---~~~~F~i~t~-~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.++.|.|.++ +++|+|+|+++.|++.|+.+|+.+++
T Consensus 84 ~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 84 KSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp GCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 4689999875 48999999999999999999998864
No 60
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.53 E-value=1.5e-14 Score=145.37 Aligned_cols=93 Identities=18% Similarity=0.275 Sum_probs=76.2
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEc---cceeeec----------CCceEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISL---RGAIIQT----------EDSCTFII 78 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L---~~~~i~~----------~~~~~F~i 78 (538)
+...|.++|||+|++...++|++|||||+++.|+||+++.+. .++|.|.| ..+.|.. ..+++|.|
T Consensus 164 ~~~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~--~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 164 SIIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTK--TSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp SCCCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCS--STTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred CCCCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccc--cccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence 456789999999999999999999999999999999998765 45555544 5555421 24689999
Q ss_pred EeCc------eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 79 SNGV------QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 79 ~t~~------~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
.+++ ++|+|+|+|+.|+..|+.+|+.|+
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 8754 579999999999999999999875
No 61
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.53 E-value=3.1e-14 Score=149.18 Aligned_cols=92 Identities=9% Similarity=0.234 Sum_probs=76.7
Q ss_pred CCcceEEEEEeEcCC--C-CCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCc--eE
Q psy3487 14 SDAEMKGWLFKWTNY--L-KGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGV--QT 84 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~--~-k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~--~~ 84 (538)
..+.++|||.|++.. . +.|++|||||+++.|+||++. +. .+.|.|+|.+|.|.+ +.+++|.|.++. ++
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~~-~~--~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~ 352 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARG-DV--AGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKS 352 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECSS-CS--SCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBC
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecCC-Cc--CCCceEEccceEEEeccccCCCceEEEEeCCCCeE
Confidence 467999999999874 3 369999999999999999994 33 578999999998743 345899999998 99
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|+|+++.|+..||.+|+.+.+.
T Consensus 353 ~~l~A~s~~e~~~Wi~ai~~~~~~ 376 (385)
T 2q13_A 353 SILQAESKKDHEEWICTINNISKQ 376 (385)
T ss_dssp CCEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988664
No 62
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.51 E-value=3.6e-14 Score=148.41 Aligned_cols=91 Identities=19% Similarity=0.296 Sum_probs=76.6
Q ss_pred cceEEEEEeEcCCCCCceEEEEEE--eCCEEEEEecccccCCceeEEEEccceeeec-----CCceEEEEE----eCceE
Q psy3487 16 AEMKGWLFKWTNYLKGYQKRWFVL--SNGLLSYYRNQAEMSHTCRGTISLRGAIIQT-----EDSCTFIIS----NGVQT 84 (538)
Q Consensus 16 ~~~~G~L~K~~~~~k~Wk~RwFvL--~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~-----~~~~~F~i~----t~~~~ 84 (538)
..++|||+|+|...++|++||||| ++++|+||+++++. .|+|.|.|.++.+.. ..+++|.|. ++.++
T Consensus 146 ~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~~--~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~ 223 (386)
T 3lju_X 146 GYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK--EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRN 223 (386)
T ss_dssp SEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC-------CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEE
T ss_pred cccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCcc--CcccEEEeeccEEEEcccccCCCceEEEEEecCCCceE
Confidence 479999999999999999999999 79999999999876 899999999976532 467889887 66799
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
|+|.|+|+.|+.+|+++|+.+...
T Consensus 224 y~l~A~s~~e~~~Wi~aIr~a~~~ 247 (386)
T 3lju_X 224 IFIYHEDGKEIVDWFNALRAARFH 247 (386)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHhhhhcccc
Confidence 999999999999999999987544
No 63
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.49 E-value=3.4e-14 Score=149.98 Aligned_cols=94 Identities=14% Similarity=0.192 Sum_probs=79.2
Q ss_pred CCCCcceEEEEEeE---cCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCc--
Q psy3487 12 SHSDAEMKGWLFKW---TNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGV-- 82 (538)
Q Consensus 12 ~~~~~~~~G~L~K~---~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~-- 82 (538)
....+.++|||.|+ |...+.|+||||||+++.|+||+.... .+.+.|+|..|.|.+ +.++||.|.+++
T Consensus 297 ~~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~---~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~ 373 (407)
T 4h8s_A 297 NRNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV---AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGK 373 (407)
T ss_dssp CCSCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS---SCCCCBCSSCCEEEEECCTTCSSEEEEECTTSS
T ss_pred cCCcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC---CCCeEEECCceEEEECCCCCCCceEEEEecCCC
Confidence 44567899999998 445678999999999999999997754 456789999999853 356899999875
Q ss_pred eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 83 QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 83 ~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++|+|+|+++.|+..||.+|+.++..
T Consensus 374 ~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 374 SGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp CCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999988664
No 64
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.42 E-value=5.3e-13 Score=115.99 Aligned_cols=91 Identities=20% Similarity=0.365 Sum_probs=73.6
Q ss_pred ceEEEEEe--EcCCCC-CceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceee-e---------c---CCceEEEEE
Q psy3487 17 EMKGWLFK--WTNYLK-GYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAII-Q---------T---EDSCTFIIS 79 (538)
Q Consensus 17 ~~~G~L~K--~~~~~k-~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i-~---------~---~~~~~F~i~ 79 (538)
.++|||.+ +++..+ +|++|||||.++.|+||+++.+. ...|.|.|+|..+.- . . +.++.|.|.
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~ 81 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL 81 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence 36999996 777777 99999999999999999988654 457889999976542 1 1 135789997
Q ss_pred eC------ceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 80 NG------VQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 80 t~------~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.. .++++|.|+|+.|+++|+.+|+.+..
T Consensus 82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 53 48999999999999999999997654
No 65
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.32 E-value=7.1e-12 Score=111.94 Aligned_cols=91 Identities=20% Similarity=0.296 Sum_probs=75.4
Q ss_pred ceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccc---------ccC---------------------------------
Q psy3487 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA---------EMS--------------------------------- 54 (538)
Q Consensus 17 ~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~---------d~~--------------------------------- 54 (538)
.++|||.|+++..+.|++|||||.++.|+|++... +..
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 58999999999999999999999999999998211 110
Q ss_pred -----CceeEEEEccceeee--c----CCceEEEEEeCc---eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 55 -----HTCRGTISLRGAIIQ--T----EDSCTFIISNGV---QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 55 -----~~~~g~i~L~~~~i~--~----~~~~~F~i~t~~---~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.-++|.|+|.+|.|. + ..++.|.|.+++ ++|.|.|++..|+.+|+.+|+.+..
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 012799999999984 2 246899998875 5999999999999999999998764
No 66
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.30 E-value=3.3e-12 Score=135.90 Aligned_cols=97 Identities=24% Similarity=0.429 Sum_probs=73.1
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEe-CCEEEEEecccccCCceeEEEEccceeee------c--CCceEEEEEeCc-
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLS-NGLLSYYRNQAEMSHTCRGTISLRGAIIQ------T--EDSCTFIISNGV- 82 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~-~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~------~--~~~~~F~i~t~~- 82 (538)
.+.+.++|||.|+|+..+.||+|||||+ ++.|.|||++.+. .++|.|+|..+++. + ..+++|.|....
T Consensus 3 ~~~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~--~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~ 80 (446)
T 4ejn_A 3 DVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 80 (446)
T ss_dssp -CCEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC---------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred CceEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCC--CccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence 3578999999999999999999999997 8999999999876 77899999986531 2 246799997654
Q ss_pred eEE---EEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 83 QTF---HIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 83 ~~~---~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
+.+ .|.++++.+++.|+.+|+.+.+...+
T Consensus 81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~~~ 112 (446)
T 4ejn_A 81 TTVIERTFHVETPEEREEWTTAIQTVADGLKK 112 (446)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHCCC---
T ss_pred ceeeeeEEecCCHHHHHHHHHHHHhhhhhhhc
Confidence 333 78999999999999999998765443
No 67
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.28 E-value=1.5e-11 Score=120.74 Aligned_cols=93 Identities=22% Similarity=0.213 Sum_probs=76.5
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEE---EEccceeee----------cCCceEEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGT---ISLRGAIIQ----------TEDSCTFIIS 79 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~---i~L~~~~i~----------~~~~~~F~i~ 79 (538)
...|+++|||++++...|.|++|||+|+++.|+||+..... .+++. ++|.++.|. +..+++|.|.
T Consensus 129 s~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk--~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik 206 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSA--APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIK 206 (256)
T ss_dssp TSCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCC--CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEE
T ss_pred CCCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCC--ccccceEEEEcCCCEEEEecccccccCCCCCCEEEEE
Confidence 56789999999998888999999999999999999977533 34443 689988873 2246899998
Q ss_pred eCce------EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 80 NGVQ------TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 80 t~~~------~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+... .++|+|+++.++..|+++|+.++-
T Consensus 207 ~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 207 PNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp ETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 6643 699999999999999999998754
No 68
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.21 E-value=5.2e-11 Score=118.20 Aligned_cols=96 Identities=17% Similarity=0.237 Sum_probs=74.0
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc-CCceeEEEEccceeee----------cCCceEEEEEe
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM-SHTCRGTISLRGAIIQ----------TEDSCTFIISN 80 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~-~~~~~g~i~L~~~~i~----------~~~~~~F~i~t 80 (538)
+...|+++|||++++...+.|++|||+|+++.|+||+..... .....+.++|.++.|. +..+++|.|.+
T Consensus 154 ~~~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~ 233 (281)
T 4gmv_A 154 SVTVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKH 233 (281)
T ss_dssp SCCCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEEC
T ss_pred CCCCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEec
Confidence 356789999999999888999999999999999999876532 1233566799998763 23478999986
Q ss_pred Cc------eEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 81 GV------QTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 81 ~~------~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+. .+++|+|+|+.++..|+.+|+.++-
T Consensus 234 ~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 234 PQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp TTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 43 5799999999999999999997753
No 69
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=2.2e-10 Score=98.50 Aligned_cols=93 Identities=19% Similarity=0.321 Sum_probs=76.6
Q ss_pred CCCCcceEEEEEeEc--CCCCCceEEEEEEeC------CEEEEEecccccC--CceeEEEEcccee-eec--------CC
Q psy3487 12 SHSDAEMKGWLFKWT--NYLKGYQKRWFVLSN------GLLSYYRNQAEMS--HTCRGTISLRGAI-IQT--------ED 72 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~--~~~k~Wk~RwFvL~~------~~L~Yyk~~~d~~--~~~~g~i~L~~~~-i~~--------~~ 72 (538)
..+.+.++|||.++. ...|.||||||||.. ..|-||.+++... ..++..|.|+.|. |.+ .+
T Consensus 8 m~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~ 87 (127)
T 2d9w_A 8 MGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRD 87 (127)
T ss_dssp SCCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSS
T ss_pred ccCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCc
Confidence 467789999999987 455679999999973 5899999987543 4678999999998 422 23
Q ss_pred ceEEEEEeCceEEEEEeccHHHHHHHHHHhHhh
Q psy3487 73 SCTFIISNGVQTFHIKASNEVERQRWVTALELA 105 (538)
Q Consensus 73 ~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a 105 (538)
...|.|.|+.++|.|.|+++ |+.+|+.+|...
T Consensus 88 ~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 88 TSAFFLETKERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp CEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred ceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 47899999999999999975 999999998754
No 70
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.19 E-value=1.7e-11 Score=121.61 Aligned_cols=97 Identities=19% Similarity=0.340 Sum_probs=74.4
Q ss_pred CCCCCcceEEEEEeE-----cC-------CCCCceEEEEEEeCCEEEEEeccccc----CCceeEEEEccceeee--c--
Q psy3487 11 ASHSDAEMKGWLFKW-----TN-------YLKGYQKRWFVLSNGLLSYYRNQAEM----SHTCRGTISLRGAIIQ--T-- 70 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~-----~~-------~~k~Wk~RwFvL~~~~L~Yyk~~~d~----~~~~~g~i~L~~~~i~--~-- 70 (538)
+..+.+.++|||.++ ++ ..+.|++|||||+++.|+||+++... ...|.+.|.|.++.+. +
T Consensus 6 ~~~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~ 85 (279)
T 3a8n_A 6 AAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEH 85 (279)
T ss_dssp ----CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTS
T ss_pred ccCCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEecccc
Confidence 356778999999753 11 35789999999999999999988643 2357788999999976 2
Q ss_pred -CCceEEEEEe-CceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 71 -EDSCTFIISN-GVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 71 -~~~~~F~i~t-~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
..++.|.|.+ ++++|+|+|++..|++.|+.+|..+..
T Consensus 86 ~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 86 PKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp SSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 2467999976 458999999999999999999987754
No 71
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.18 E-value=1e-10 Score=104.28 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=79.0
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccce-eeecCCceEEEEEeCceEEEEEec
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGA-IIQTEDSCTFIISNGVQTFHIKAS 90 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~-~i~~~~~~~F~i~t~~~~~~L~A~ 90 (538)
..+.+.+.|+|.|+.+.+ |++|||+|.++-+.||-++... ..+|.|+|+.. .+.......|.|.+++++|+|.+.
T Consensus 48 ~ge~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~~~--~~KGeIpls~~l~ve~k~~~~F~I~Tp~RtY~~~d~ 123 (151)
T 1w1g_A 48 ENNLILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPVNK--VLKGEIPWSQELRPEAKNFKTFFVHTPNRTYYLMDP 123 (151)
T ss_dssp TTCCEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT--EEEEEECCCTTCEEEESSSSEEEEEETTEEEEEECT
T ss_pred CCCcEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCccc--cccceEecCCCeeEEEcCCCEEEEECCCceEEEEcC
Confidence 456789999999976655 9999999999999999999855 88899999974 466666779999999999999997
Q ss_pred cHHHHHHHHHHhHhhhhh
Q psy3487 91 NEVERQRWVTALELAKSK 108 (538)
Q Consensus 91 s~~e~~~Wi~al~~a~~~ 108 (538)
..++++|+.+|+.+...
T Consensus 124 -~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 124 -SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp -TSCHHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHHH
Confidence 88999999999988653
No 72
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.93 E-value=4.4e-09 Score=90.31 Aligned_cols=96 Identities=16% Similarity=0.308 Sum_probs=79.2
Q ss_pred CCCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-eec--------C--CceEEEEE
Q psy3487 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQT--------E--DSCTFIIS 79 (538)
Q Consensus 11 ~~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~--------~--~~~~F~i~ 79 (538)
.....+.++||+.+.++.-+.||||||+|+..+|.||+++.+. ++--.|+|..+. |.+ . .+++|+|.
T Consensus 3 ~~~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~--~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~ 80 (125)
T 2coa_A 3 SGSSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTN--RYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV 80 (125)
T ss_dssp CCCCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSCS--SCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred CCCCceeecceEEEEccCCccccceeeEecCCeEEEEecCCCC--ceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence 3456789999999999999999999999999999999998765 666789999655 221 1 45999999
Q ss_pred eCceEEEEEec---c--------HHHHHHHHHHhHhhhhh
Q psy3487 80 NGVQTFHIKAS---N--------EVERQRWVTALELAKSK 108 (538)
Q Consensus 80 t~~~~~~L~A~---s--------~~e~~~Wi~al~~a~~~ 108 (538)
+.+.+|++.++ . ...+..|..+|++|-.+
T Consensus 81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 99999999874 1 24588899999988655
No 73
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=6.3e-08 Score=83.34 Aligned_cols=95 Identities=18% Similarity=0.324 Sum_probs=78.7
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEcccee-eec--------C--CceEEEEEe
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI-IQT--------E--DSCTFIISN 80 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~--------~--~~~~F~i~t 80 (538)
....+.++||+-+.++.-+.|||+|++|+..+|.+|+++.+. ++--.|+|..+- |.+ . .++||+|.+
T Consensus 4 ~~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~--k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T 81 (129)
T 2d9z_A 4 GSSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGS--KYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT 81 (129)
T ss_dssp CCTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCC--SCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC
T ss_pred CCCceeecceEEEEccCCccccceeeEecCCeEEEEecCCCC--ceeceeeHHHhcccccccCccccCCCCCCceEEEEE
Confidence 356788999999999999999999999999999999998765 556789999765 221 1 348999999
Q ss_pred CceEEEEEecc---------------HHHHHHHHHHhHhhhhh
Q psy3487 81 GVQTFHIKASN---------------EVERQRWVTALELAKSK 108 (538)
Q Consensus 81 ~~~~~~L~A~s---------------~~e~~~Wi~al~~a~~~ 108 (538)
.+.+|++.++. ....+.|..+|++|-.+
T Consensus 82 ~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 82 DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 99999997642 57888999999998665
No 74
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.46 E-value=1.4e-07 Score=92.43 Aligned_cols=88 Identities=47% Similarity=0.781 Sum_probs=69.7
Q ss_pred eeeeeccEEeEEEccceeeeccCCCccccCCCCCCceEEecCCccccccHHHHHhchHHHHHHhhhhccCCCCCceeecc
Q psy3487 430 LHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVING 509 (538)
Q Consensus 430 ~nEv~gl~~~g~f~~g~l~~~~~~~~~~~~~~r~d~~~w~~g~e~~~~~i~~l~~~~d~~~~~~~~~~~~~~~~~~~i~~ 509 (538)
..++..+...|.|+++++..+... ..+.||+|+|.|+++.++.|+.|..++..||.++..+| +.+|.|.|+|
T Consensus 44 ~~~~~~~~~~g~~~~a~i~~~~~~---~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ln-----~~lGl~~i~~ 115 (247)
T 2hbt_A 44 GDEVRALHDTGKFTDGQLVSQKSD---SSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCN-----GKLGSYKING 115 (247)
T ss_dssp HHHHHHHHHTTCSCSCCEEECCSS---STTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHHTT-----TTSTTCCEEE
T ss_pred HHHHHhhhhcCCcccccccccccc---ccccccccceeeecccccchhHHHHHHHHHHHHHHHHh-----hhcCcccccc
Confidence 344444444566788777653221 24789999999999999999999999999999999985 6689899999
Q ss_pred ccceeeeeeCCCCccc
Q psy3487 510 RTKMLKEVYGHARVGH 525 (538)
Q Consensus 510 r~~am~acyp~~~~~~ 525 (538)
++.+|++|||++|..|
T Consensus 116 ~~e~~~~~Y~~~G~~y 131 (247)
T 2hbt_A 116 RTKAMVACYPGNGTGY 131 (247)
T ss_dssp ECCEEEEEECSSSCCE
T ss_pred cceEEEEEecCCCCcc
Confidence 9999999999867665
No 75
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.30 E-value=1.4e-06 Score=84.33 Aligned_cols=76 Identities=12% Similarity=0.281 Sum_probs=52.7
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee----cCCceEEEEEeCceEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ----TEDSCTFIISNGVQTFHI 87 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~----~~~~~~F~i~t~~~~~~L 87 (538)
..+.|.++|||.|++..+++|++|||||+++.|.||++..+. ...|-+.-.+-.+. ..=..++.+..++.-+++
T Consensus 17 ~~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~~~--~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yy 94 (228)
T 3tfm_A 17 GPGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQEA--LKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYF 94 (228)
T ss_dssp ----CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCCCS--SEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEE
T ss_pred CCCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCCCc--ceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEE
Confidence 467899999999999999999999999999999999998876 55588876664331 111234444445544444
Q ss_pred Ee
Q psy3487 88 KA 89 (538)
Q Consensus 88 ~A 89 (538)
+.
T Consensus 95 k~ 96 (228)
T 3tfm_A 95 EN 96 (228)
T ss_dssp SS
T ss_pred eC
Confidence 43
No 76
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.82 E-value=0.00012 Score=64.22 Aligned_cols=96 Identities=15% Similarity=0.322 Sum_probs=73.5
Q ss_pred CcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc-cCCceeEEEEccceeeec-----CCceEEEEEeCc-eEEEE
Q psy3487 15 DAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE-MSHTCRGTISLRGAIIQT-----EDSCTFIISNGV-QTFHI 87 (538)
Q Consensus 15 ~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d-~~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~-~~~~L 87 (538)
.+...|-...+....+.-+.|||+|=++.|.|.+.... ....-+|.++|.+..|.. +.+++|+|..+. +.+.+
T Consensus 27 ~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v 106 (132)
T 1v61_A 27 NVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVV 106 (132)
T ss_dssp CCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEE
T ss_pred CeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEeccccccCccEEEEecCCCceEEE
Confidence 33444444444444455688999999988888886542 245778999999999853 236899999877 89999
Q ss_pred EeccHHHHHHHHHHhHhhhhhhc
Q psy3487 88 KASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
.|.+..|+++|+.+|+.+.+.+.
T Consensus 107 ~~~s~eE~~~Wl~~L~~~i~~~~ 129 (132)
T 1v61_A 107 HCNNNQDFQEWMEQLNRLTKSGP 129 (132)
T ss_dssp CCCCSHHHHHHHHHHHHHHTTSC
T ss_pred EeCCHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998876543
No 77
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.69 E-value=0.0002 Score=61.74 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=72.2
Q ss_pred CCCcceEEEEEeEcC--------CCCCceEEEEEEeC------CEEEEEecccccCCceeEEEEcccee-e-------ec
Q psy3487 13 HSDAEMKGWLFKWTN--------YLKGYQKRWFVLSN------GLLSYYRNQAEMSHTCRGTISLRGAI-I-------QT 70 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~--------~~k~Wk~RwFvL~~------~~L~Yyk~~~d~~~~~~g~i~L~~~~-i-------~~ 70 (538)
.....+||-|.-... ....|+++|++|+. ..|.||..++.. +|+..|++..+. | .+
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkss--KpK~~i~cs~I~EVR~tt~LEmP 92 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKAS--RPKVSIPLSAIIEVRTTMPLEMP 92 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSS--SCSSCEETTTCCBCCCCCCSSSC
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCccc--CCccccchhhhhhhhhccccccC
Confidence 345788999875422 34579999999961 478899777644 888889888654 2 25
Q ss_pred CCceEEEEEeCce-EEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 71 EDSCTFIISNGVQ-TFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 71 ~~~~~F~i~t~~~-~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
+..+.|.|.+.+. .|+|.|.++.+++.|+..|+....
T Consensus 93 D~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 93 EKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp CCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 6789999998764 999999999999999999987654
No 78
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.51 E-value=0.00064 Score=64.07 Aligned_cols=92 Identities=18% Similarity=0.259 Sum_probs=70.4
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeC------C-EEEEEeccccc--CCceeEEEEcccee-ee-----cCCceEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSN------G-LLSYYRNQAEM--SHTCRGTISLRGAI-IQ-----TEDSCTFI 77 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~------~-~L~Yyk~~~d~--~~~~~g~i~L~~~~-i~-----~~~~~~F~ 77 (538)
.+...+||+.+.+.+. .||+||+||+- . .|..||+..|. ....+.+|.|..+. +. ....+.+.
T Consensus 6 ~~~~v~eg~vk~r~~K--kWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlA 83 (224)
T 3ml4_A 6 TEAALVEGQVKLRDGK--KWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTLA 83 (224)
T ss_dssp -CCCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEE
T ss_pred ccceeEEEeeeeecCC--ceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEEE
Confidence 3456899999976654 59999999972 2 67899888764 34567889998766 32 23467889
Q ss_pred EEeCceEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 78 ISNGVQTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 78 i~t~~~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
|+....++.|.+++.+++..|...|+...
T Consensus 84 IIc~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 84 IICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp EEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred EEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 99999999999999999999999888643
No 79
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.46 E-value=0.0023 Score=54.50 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=70.6
Q ss_pred CCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEeccccc--CCceeEEEEccceeeec-----CCceEEEEEeCceE
Q psy3487 13 HSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEM--SHTCRGTISLRGAIIQT-----EDSCTFIISNGVQT 84 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~--~~~~~g~i~L~~~~i~~-----~~~~~F~i~t~~~~ 84 (538)
.....++|.|.+... ..+.=++++|.|=+.+|-|-+-.... ...-...++|.+..|.. .-++.|.|.+..++
T Consensus 5 gR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s 84 (113)
T 1zc3_B 5 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPES 84 (113)
T ss_dssp CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETTEE
T ss_pred CeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEEeCCce
Confidence 345678999998764 33334557777766677777653221 13445678999888742 23689999999999
Q ss_pred EEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 85 FHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 85 ~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+.++|+++.|+.+|+.+++.+++.
T Consensus 85 ~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 85 RIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998754
No 80
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.40 E-value=0.00068 Score=71.38 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=72.0
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec----CCceEEEEEeCceEEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT----EDSCTFIISNGVQTFHIK 88 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~~~~~L~ 88 (538)
.....++|.|.+... +.++.|||.|=++.|-|.+...+.....++.|+|.++.|.. +.++.|.|.++.+.|.|.
T Consensus 241 ~r~li~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~ 318 (434)
T 3mpx_A 241 GREFLKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLS 318 (434)
T ss_dssp TCCEEECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCCCTTSCSEEEEECSSCEEEEE
T ss_pred CcceEecceEEEEeC--CCceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEe
Confidence 445688999988764 34889999999999999987655556778999999998842 246899999999999999
Q ss_pred eccHHHHHHHHHHhHhhhhhhc
Q psy3487 89 ASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 89 A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
|.++.|++.|+.+|+.+.+...
T Consensus 319 a~s~~ek~~W~~~i~~ai~e~~ 340 (434)
T 3mpx_A 319 ASSCAERDEWYGCLSRALPEDY 340 (434)
T ss_dssp CSSHHHHHHHHHHHHHC-----
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999876543
No 81
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.04 E-value=0.0036 Score=55.07 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=71.2
Q ss_pred CCCCcceEEEEEeEc----CCCCCceEEEEEEeCCEEEEEe----cccccCCceeEEEEccceeeec----CCceEEEEE
Q psy3487 12 SHSDAEMKGWLFKWT----NYLKGYQKRWFVLSNGLLSYYR----NQAEMSHTCRGTISLRGAIIQT----EDSCTFIIS 79 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~----~~~k~Wk~RwFvL~~~~L~Yyk----~~~d~~~~~~g~i~L~~~~i~~----~~~~~F~i~ 79 (538)
.+......+-|.--. ...++-+.|+|-|=++.|-|-| .........++.++|.|..|.. .-++.|.|.
T Consensus 9 phRrlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e~~p~~~~l~ 88 (140)
T 3qwm_A 9 PHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLT 88 (140)
T ss_dssp -CCCEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCSSCTTEEEEE
T ss_pred CCceEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCCCCceEEEEE
Confidence 344455555553221 1345578999888888888885 2223346788999999999853 247899888
Q ss_pred eCc------eEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 80 NGV------QTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 80 t~~------~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
... .++.|.|++..|+.+|+++|+.+++...-
T Consensus 89 s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~e 126 (140)
T 3qwm_A 89 SSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQE 126 (140)
T ss_dssp ECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 642 77999999999999999999998776433
No 82
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.02 E-value=0.0072 Score=62.98 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=77.7
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccc--ccCCceeEEEEccceeeecC-C----------ceEEEE
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA--EMSHTCRGTISLRGAIIQTE-D----------SCTFII 78 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~--d~~~~~~g~i~L~~~~i~~~-~----------~~~F~i 78 (538)
......++|.|.+........+.|+|.|=+..|-+.+... ......++.|+|..+.|... + ++.|.|
T Consensus 253 ~~r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i 332 (402)
T 2dfk_A 253 RSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKL 332 (402)
T ss_dssp TCCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEE
T ss_pred cccceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEE
Confidence 4567889999998765445688999999999999988653 12245678999999987531 1 368988
Q ss_pred EeC--ceEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 79 SNG--VQTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 79 ~t~--~~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
... .+.|.|.|.++.++..|+++|+.+......
T Consensus 333 ~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 333 HNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 775 479999999999999999999988776443
No 83
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=96.92 E-value=0.0069 Score=63.11 Aligned_cols=96 Identities=16% Similarity=0.281 Sum_probs=75.9
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC--C-------ceEEEEEe--C
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE--D-------SCTFIISN--G 81 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~--~-------~~~F~i~t--~ 81 (538)
.+...++|.|..+....+.++.|++.|=+..|-+.+..++ ....++.|+|..+.|... . ++.|.|.. +
T Consensus 231 ~grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~-~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~ 309 (406)
T 2vrw_B 231 YGRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD-SYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQG 309 (406)
T ss_dssp GCSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT-EEEEEEEEETTTEEEEC--------CTTCEEEEEEETTC
T ss_pred cCcccccccEEEEecCCCccceEEEEecCCEEEEEEecCC-ceEEEEEecccceeeeecCCCCccCCccceeeEEEecCC
Confidence 4557899999987655566899999998889988887543 345678999999887531 1 37898876 4
Q ss_pred ceEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 82 VQTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 82 ~~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
.+.|.|.|.++.+++.|+++|+.+.+..
T Consensus 310 ~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 310 AQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 5799999999999999999999887653
No 84
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=96.90 E-value=0.006 Score=56.64 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=68.0
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccC-Cc----eeEEEEccceeeec--CCceEEEEEe----C
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMS-HT----CRGTISLRGAIIQT--EDSCTFIISN----G 81 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-~~----~~g~i~L~~~~i~~--~~~~~F~i~t----~ 81 (538)
.....++|-|..+.... .++.||+.|=+..|-|.+..++.- .. ....|.|..+.|.. .++..|.+.+ +
T Consensus 68 ~R~Ll~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~d~~~~fli~~~~~g 146 (185)
T 2lg1_A 68 RKKLVRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAHEEKGLFLISMGMTD 146 (185)
T ss_dssp TSCEEEEEEEEEECTTC-CEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSSCSSEEEEECCSSSC
T ss_pred CCceeeeceEEEeccCC-CeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCCCCCeEEEEEecCCC
Confidence 46789999998554333 689999999888888776543220 00 12467888888753 3445554443 2
Q ss_pred ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 82 VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 82 ~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.+.|.|.|.+..|+..|+.+|+.|.+.
T Consensus 147 ~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 147 PEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 489999999999999999999988765
No 85
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=96.88 E-value=0.01 Score=62.97 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=77.2
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc--cCCceeEEEEccceeeec--C---------CceEEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE--MSHTCRGTISLRGAIIQT--E---------DSCTFIIS 79 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d--~~~~~~g~i~L~~~~i~~--~---------~~~~F~i~ 79 (538)
.....++|.|.+........+.|+|.|=+..|-|.+.... .....++.|+|..+.|.. + -++.|.|.
T Consensus 331 ~r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~ 410 (466)
T 2pz1_A 331 SSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLH 410 (466)
T ss_dssp CSCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEE
T ss_pred cceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEE
Confidence 4567899999988764456889999999999999886531 224567999999988743 1 13789988
Q ss_pred eC--ceEEEEEeccHHHHHHHHHHhHhhhhhhcc
Q psy3487 80 NG--VQTFHIKASNEVERQRWVTALELAKSKARQ 111 (538)
Q Consensus 80 t~--~~~~~L~A~s~~e~~~Wi~al~~a~~~~~R 111 (538)
.. .+.|.|.|.++.++..|+++|+.++.....
T Consensus 411 ~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 411 RGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp CSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 65 479999999999999999999998776433
No 86
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=96.86 E-value=0.0062 Score=62.19 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=73.4
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccc---------ccCCceeEEEEccceeeecC-----CceEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA---------EMSHTCRGTISLRGAIIQTE-----DSCTFII 78 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~---------d~~~~~~g~i~L~~~~i~~~-----~~~~F~i 78 (538)
.....++|.|.+.+ .++.|+|.|=+..|-+.+... ......++.|+|..+.|... .++.|.|
T Consensus 244 ~r~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i 319 (354)
T 1dbh_A 244 CNEFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEI 319 (354)
T ss_dssp CCCEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEE
T ss_pred cceEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEE
Confidence 45678899998874 578899999888998888652 12235679999999998542 2589999
Q ss_pred EeCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 79 SNGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 79 ~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.... ..|.|.|.|+.++..|+.+|+.+..+
T Consensus 320 ~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 320 ILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp CCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 8875 89999999999999999999987653
No 87
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.76 E-value=0.0076 Score=52.61 Aligned_cols=88 Identities=16% Similarity=0.197 Sum_probs=58.5
Q ss_pred EEEEeEcCCCCCceEEEEEEeC-CEEEEEecccccCCceeEEEEcccee-eec--------------CCceEEEEEeCc-
Q psy3487 20 GWLFKWTNYLKGYQKRWFVLSN-GLLSYYRNQAEMSHTCRGTISLRGAI-IQT--------------EDSCTFIISNGV- 82 (538)
Q Consensus 20 G~L~K~~~~~k~Wk~RwFvL~~-~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~--------------~~~~~F~i~t~~- 82 (538)
..|.|.+.... -+.|||+|.+ +...||.+.........+.|+|..+. |.. ....+|.|..++
T Consensus 17 t~l~K~~~~~~-~k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~ 95 (131)
T 1mai_A 17 SQLLKVKSSSW-RRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQ 95 (131)
T ss_dssp EEEEEESSSSC-EEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSS
T ss_pred CeEEEECCCCc-ceeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCC
Confidence 34667654332 2678999974 55556643211112245789998876 321 135789888776
Q ss_pred -eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 83 -QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 83 -~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
++..|.|.|+.|++.|+..|+.....
T Consensus 96 ~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 96 RNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999865443
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=96.70 E-value=0.0086 Score=65.58 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=77.3
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeecC---------CceEEEEEeCc-
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE---------DSCTFIISNGV- 82 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~~---------~~~~F~i~t~~- 82 (538)
.+...++|.|.++....+.++.||+.|=++.|-|.+..++ ....++.|+|..+.|... -++.|.|....
T Consensus 403 ~grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~-~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~ 481 (587)
T 3ky9_A 403 YGRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD-SYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQG 481 (587)
T ss_dssp GCCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT-EEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC
T ss_pred cCceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC-EEEeeeeechhhceeeecCCCCcccccccceeEEEEcCC
Confidence 4557899999988776678999999999999999887643 356789999999988532 23789888765
Q ss_pred -eEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 83 -QTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 83 -~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
+.|.|.|.|..|++.|+.+|+.+.+..
T Consensus 482 ~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 482 AQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp ---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999987654
No 89
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=96.69 E-value=0.012 Score=60.21 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=71.4
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc----------------CCceeEEEEccceeeec--CCce
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM----------------SHTCRGTISLRGAIIQT--EDSC 74 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----------------~~~~~g~i~L~~~~i~~--~~~~ 74 (538)
.....++|.|.+... .+.++.|++.|=++.|-|.+..++. ....++.|+|.++.|.. ++++
T Consensus 250 ~R~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~ 328 (368)
T 1xcg_A 250 TRKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKR 328 (368)
T ss_dssp GSCEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSS
T ss_pred cceEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccCCCc
Confidence 466789999986533 3468999999999998888765321 11235789999888754 4667
Q ss_pred EEEEEeC-----ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 75 TFIISNG-----VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 75 ~F~i~t~-----~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.+.+. .+.|.|.|.|+.+++.|+.+|+.+.+.
T Consensus 329 ~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 329 AFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp EEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 8876543 379999999999999999999988653
No 90
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.62 E-value=0.018 Score=58.83 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=73.2
Q ss_pred CCCcceEEEEEeEcCCC-----------CCceEEEEEEeCCEEEEEecccc--------cCCceeEEEEccceeeec---
Q psy3487 13 HSDAEMKGWLFKWTNYL-----------KGYQKRWFVLSNGLLSYYRNQAE--------MSHTCRGTISLRGAIIQT--- 70 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~-----------k~Wk~RwFvL~~~~L~Yyk~~~d--------~~~~~~g~i~L~~~~i~~--- 70 (538)
.+...++|.|..+.... ..++.|++.|=+..|-|.+...+ .....++.|+|..+.|..
T Consensus 207 ~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~ 286 (353)
T 1kz7_A 207 LGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK 286 (353)
T ss_dssp GCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT
T ss_pred hhhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC
Confidence 45678999998764321 23788999998888888886532 123457889999988753
Q ss_pred CCceEEEEEeC--ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 71 EDSCTFIISNG--VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 71 ~~~~~F~i~t~--~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.+++.|.|... .+.|.|.|.|+.+++.|+++|+.+...
T Consensus 287 ~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 326 (353)
T 1kz7_A 287 GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTS 326 (353)
T ss_dssp TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 35789999763 479999999999999999999988655
No 91
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=96.59 E-value=0.011 Score=61.76 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=71.2
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc----------------CCceeEEEEccceeeec--CCce
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM----------------SHTCRGTISLRGAIIQT--EDSC 74 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----------------~~~~~g~i~L~~~~i~~--~~~~ 74 (538)
.....++|.|.++.. ...++.|++.|=++.|-+.+..++. ....++.|+|..+.|.. .++.
T Consensus 292 ~r~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~ 370 (418)
T 3t06_A 292 TRKMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKR 370 (418)
T ss_dssp GSCEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSS
T ss_pred cceeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccccccCc
Confidence 466789999987653 2358899999999999988855321 11224678898888753 4567
Q ss_pred EEEEEeC-----ceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 75 TFIISNG-----VQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 75 ~F~i~t~-----~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.|... .++|.|.|.+..|++.|+.+|+.+...
T Consensus 371 ~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 371 AFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp EEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 8877653 279999999999999999999987653
No 92
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.41 E-value=0.023 Score=56.91 Aligned_cols=96 Identities=13% Similarity=0.233 Sum_probs=72.7
Q ss_pred CCCcceEEEEEeEcC--CCCCceEEEEEEeCCEEEEEeccccc----CCceeEEEEccceeeec---CCceEEEEEe---
Q psy3487 13 HSDAEMKGWLFKWTN--YLKGYQKRWFVLSNGLLSYYRNQAEM----SHTCRGTISLRGAIIQT---EDSCTFIISN--- 80 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~--~~k~Wk~RwFvL~~~~L~Yyk~~~d~----~~~~~g~i~L~~~~i~~---~~~~~F~i~t--- 80 (538)
.+.....|.+..+.+ ..+..+.|+|.|=+..|-|.+...+. ....++.|+|..+.|.. .+++.|.|..
T Consensus 200 ~g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~ 279 (311)
T 1nty_A 200 QGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGDPCKFALWVGRT 279 (311)
T ss_dssp GCCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTTCTTEEEEEESSS
T ss_pred cCCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccCCCCceEEEEeCCC
Confidence 345677788776643 24567899999988899888765321 23457899999988853 3578999876
Q ss_pred --CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 81 --GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 81 --~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
+...|.|.|.|+.+++.|+.+|+.+.+.
T Consensus 280 ~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 280 PTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp CCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 2468999999999999999999988653
No 93
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=96.19 E-value=0.036 Score=56.90 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccC-C---------------ceeEEEEccceeeec--CCce
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMS-H---------------TCRGTISLRGAIIQT--EDSC 74 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~-~---------------~~~g~i~L~~~~i~~--~~~~ 74 (538)
.....++|.|..+... +.++.|||.|=++.|-|.+..++.- . .....|+|..+.+.. ++..
T Consensus 256 ~r~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~~~ 334 (377)
T 3p6a_A 256 KKKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHK 334 (377)
T ss_dssp TSCEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTCTT
T ss_pred cceEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccccc
Confidence 4568899999766543 3689999999999999888553210 0 012368888887743 3344
Q ss_pred -EEEEEe---CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 75 -TFIISN---GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 75 -~F~i~t---~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.+.. +.+.|.|.|.|..|++.|+..|+.+.+.
T Consensus 335 ~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 335 AFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp EEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 445554 3489999999999999999999988765
No 94
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.06 E-value=0.067 Score=54.52 Aligned_cols=97 Identities=10% Similarity=0.195 Sum_probs=72.2
Q ss_pred CCCcceEEEEEeEcC-----CCCCceEEEEEEeCCEEEEEecccc-------cCCceeEEEEccceeeec---CCceEEE
Q psy3487 13 HSDAEMKGWLFKWTN-----YLKGYQKRWFVLSNGLLSYYRNQAE-------MSHTCRGTISLRGAIIQT---EDSCTFI 77 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-----~~k~Wk~RwFvL~~~~L~Yyk~~~d-------~~~~~~g~i~L~~~~i~~---~~~~~F~ 77 (538)
.+....+|-+..+.. ..+..+.|++.|=+..|-+.+...+ .....++.|+|..+.|.. .+++.|.
T Consensus 204 ~~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~~~~F~ 283 (354)
T 2rgn_B 204 QGKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFA 283 (354)
T ss_dssp SCCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGGGCTTEEE
T ss_pred hccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccCCCCceEE
Confidence 455777888765432 1245789999998889988885532 123567889999988753 4678998
Q ss_pred EEeC-----ceEEEEEeccHHHHHHHHHHhHhhhhhh
Q psy3487 78 ISNG-----VQTFHIKASNEVERQRWVTALELAKSKA 109 (538)
Q Consensus 78 i~t~-----~~~~~L~A~s~~e~~~Wi~al~~a~~~~ 109 (538)
|... ...|.|.|.|+.+++.|+.+|..+.+..
T Consensus 284 i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 284 LTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp EEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 8752 4799999999999999999999887653
No 95
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=95.96 E-value=0.046 Score=56.35 Aligned_cols=97 Identities=19% Similarity=0.279 Sum_probs=70.3
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc----------------CCceeEEEEccceeeec---CCc
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM----------------SHTCRGTISLRGAIIQT---EDS 73 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----------------~~~~~g~i~L~~~~i~~---~~~ 73 (538)
.....++|.|.++... ..++.|++.|=++.|-+.+..++. ....++.|+|.++.|.. +.+
T Consensus 254 ~R~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d~~ 332 (385)
T 1txd_A 254 KRKMIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNK 332 (385)
T ss_dssp GSCEEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-CC
T ss_pred cceEEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccCCc
Confidence 3567899999865432 458899999988888887754321 11235789999887753 234
Q ss_pred eEEEEEe---CceEEEEEeccHHHHHHHHHHhHhhhhhhc
Q psy3487 74 CTFIISN---GVQTFHIKASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 74 ~~F~i~t---~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
..|.|.. +.+.|.|.|.|+.+++.|+++|+.+.+...
T Consensus 333 ~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 333 ALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp EEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 5566654 248999999999999999999999877643
No 96
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.72 E-value=0.056 Score=59.92 Aligned_cols=96 Identities=19% Similarity=0.317 Sum_probs=67.0
Q ss_pred CCCcceEEEEEeEcC-CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeee----cCCceEEEEEeC-ceEEE
Q psy3487 13 HSDAEMKGWLFKWTN-YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ----TEDSCTFIISNG-VQTFH 86 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~----~~~~~~F~i~t~-~~~~~ 86 (538)
...+.+.|++.|+++ ....|++|+|.|..+.|.+..... .+...+.+..+.-. .....+|.+... .++|.
T Consensus 556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~----~~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~ 631 (689)
T 3v5w_A 556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE----APQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFI 631 (689)
T ss_dssp SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTTS----CCCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEE
T ss_pred CCcceeecccccCCCcccchhhhhccccCCCcccccccCC----CCcceeeeccccccccCcCCCCcceeeeecCCcEEE
Confidence 456789999999987 456899999999998888775432 33345666665422 123466766654 48999
Q ss_pred EEeccHHHHHHHHHHhHhhhhhhccc
Q psy3487 87 IKASNEVERQRWVTALELAKSKARQH 112 (538)
Q Consensus 87 L~A~s~~e~~~Wi~al~~a~~~~~Rm 112 (538)
+.+.|..++.+|+..|+.+-....|+
T Consensus 632 ~~t~~~~~~~~W~~~i~~~~~~~~~~ 657 (689)
T 3v5w_A 632 LQCDSDPELVQWKKELRDAYREAQQL 657 (689)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876655554
No 97
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=95.68 E-value=0.066 Score=57.86 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=67.6
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccC----------------CceeEEEEccceeeec--CCce
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMS----------------HTCRGTISLRGAIIQT--EDSC 74 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~----------------~~~~g~i~L~~~~i~~--~~~~ 74 (538)
.....++|.|.++... ..++.|||.|=++.|-|.+..++.- ......|+|..+.|.. ++..
T Consensus 409 ~R~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d~~ 487 (536)
T 3odw_A 409 KKKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHK 487 (536)
T ss_dssp TSCEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTCTT
T ss_pred cceeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccccCC
Confidence 4568899999877643 3689999999999998888653210 0112368888888753 3445
Q ss_pred EEEE-Ee---CceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 75 TFII-SN---GVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 75 ~F~i-~t---~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.|.+ .. +.+.|.|.|.+..|++.|+..|+.+++.
T Consensus 488 ~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~ 525 (536)
T 3odw_A 488 AFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 525 (536)
T ss_dssp EEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 5544 43 3489999999999999999999988765
No 98
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=95.56 E-value=0.054 Score=54.92 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=66.0
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccccC---Cc-eeEEEEccceeeecC-----------------
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMS---HT-CRGTISLRGAIIQTE----------------- 71 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~~---~~-~~g~i~L~~~~i~~~----------------- 71 (538)
.....++|.|.+.. .+.|++.|=+..|-+.+...... .. .++.|+|..+.|...
T Consensus 229 ~r~li~~G~l~~~~-----~~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~ 303 (346)
T 2z0q_A 229 SRVLCCHGELKNNR-----GVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSN 303 (346)
T ss_dssp CCCEEEEEEEEETT-----SCEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSH
T ss_pred CeEEEEeceeEECC-----CcEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccC
Confidence 34467889987632 27899999888998888643211 11 356788998887431
Q ss_pred ---CceEEEEEe----CceEEEEEeccHHHHHHHHHHhHhhhh
Q psy3487 72 ---DSCTFIISN----GVQTFHIKASNEVERQRWVTALELAKS 107 (538)
Q Consensus 72 ---~~~~F~i~t----~~~~~~L~A~s~~e~~~Wi~al~~a~~ 107 (538)
.++.|.|.. ....|.|.|.|+.+++.|+++|+.|.+
T Consensus 304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 146899874 358999999999999999999998753
No 99
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=94.48 E-value=0.0066 Score=64.99 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=0.0
Q ss_pred CCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccccc----------------CCc-eeEEEEccceeeec-----C
Q psy3487 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEM----------------SHT-CRGTISLRGAIIQT-----E 71 (538)
Q Consensus 14 ~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d~----------------~~~-~~g~i~L~~~~i~~-----~ 71 (538)
....++|.|.|. ++++.|||.|=+..|-|.+..... ... -++.|+|.++.|.. .
T Consensus 251 r~li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~ 326 (510)
T 3jzy_A 251 RKLLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSS 326 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEeceEEEc----CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCc
Confidence 345677777764 457899999988888888744321 001 15667888877642 2
Q ss_pred CceEEEEEeCceEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 72 DSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 72 ~~~~F~i~t~~~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.+++|.|....++|.|.|.++.|+..|+.+|+.+.+.
T Consensus 327 ~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 363 (510)
T 3jzy_A 327 DEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQ 363 (510)
T ss_dssp -------------------------------------
T ss_pred cccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHH
Confidence 4689999998899999999999999999999987665
No 100
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=93.31 E-value=0.24 Score=57.89 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=72.1
Q ss_pred CCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEecccc---------cCCceeEEEEccceeeecC-----CceEEEE
Q psy3487 13 HSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAE---------MSHTCRGTISLRGAIIQTE-----DSCTFII 78 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~d---------~~~~~~g~i~L~~~~i~~~-----~~~~F~i 78 (538)
.....++|.|.+.+.. +.||+.|=++.|-+.|.... .....++.|+|..+.|... .++.|.|
T Consensus 441 ~r~Li~eG~l~~~~~k----~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I 516 (1049)
T 3ksy_A 441 CNEFIMEGTLTRVGAK----HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEI 516 (1049)
T ss_dssp CSCCCCEEEEEETTCS----SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEE
T ss_pred cceEEEeceEEEEccC----ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEE
Confidence 4567899999887633 88999999999999886632 1245678999999887431 2478999
Q ss_pred EeCc-eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 79 SNGV-QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 79 ~t~~-~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
.... ..|.|.|.++.|+..|+++|+.++..
T Consensus 517 ~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 517 ILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 7765 69999999999999999999877553
No 101
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=92.16 E-value=1.2 Score=45.50 Aligned_cols=98 Identities=11% Similarity=0.113 Sum_probs=63.9
Q ss_pred CCCcceEEEEEeEcC-----CCCCceEEEEEEeCCEEEE-Eecccc-----------------cCCceeEEEEccceeee
Q psy3487 13 HSDAEMKGWLFKWTN-----YLKGYQKRWFVLSNGLLSY-YRNQAE-----------------MSHTCRGTISLRGAIIQ 69 (538)
Q Consensus 13 ~~~~~~~G~L~K~~~-----~~k~Wk~RwFvL~~~~L~Y-yk~~~d-----------------~~~~~~g~i~L~~~~i~ 69 (538)
.+...+.|.+..... ..+.-+.|++.|=+..|-+ .+.... .....++.|+|..+.|.
T Consensus 235 ~g~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~ 314 (377)
T 1foe_A 235 MGDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVR 314 (377)
T ss_dssp GGGEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEE
T ss_pred ccceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccceEEE
Confidence 345677787764421 2234567887776665544 453210 12345789999999885
Q ss_pred c--C-C---ceEEEEE--------eCceEEEEEeccHHHHHHHHHHhHhhhhhhc
Q psy3487 70 T--E-D---SCTFIIS--------NGVQTFHIKASNEVERQRWVTALELAKSKAR 110 (538)
Q Consensus 70 ~--~-~---~~~F~i~--------t~~~~~~L~A~s~~e~~~Wi~al~~a~~~~~ 110 (538)
. + + ...|.|. .+.+.|.|.|.|+.+++.|+.+|..+.....
T Consensus 315 ~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~ 369 (377)
T 1foe_A 315 ALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKH 369 (377)
T ss_dssp CCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHh
Confidence 3 1 1 2357665 2347999999999999999999998876543
No 102
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=91.96 E-value=1 Score=50.48 Aligned_cols=85 Identities=21% Similarity=0.404 Sum_probs=63.7
Q ss_pred cceEEEEEeEcC--CCCCceEEEEEEeCCEEEEEecccccCCceeEEEEccceeeec------CCceEEEEEeCc-----
Q psy3487 16 AEMKGWLFKWTN--YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------EDSCTFIISNGV----- 82 (538)
Q Consensus 16 ~~~~G~L~K~~~--~~k~Wk~RwFvL~~~~L~Yyk~~~d~~~~~~g~i~L~~~~i~~------~~~~~F~i~t~~----- 82 (538)
+...|||..... +..+=+.-||||.-..|.|||++++. +-+=.++|.+..+.. ..++.|.|-.+.
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEK--EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVY 617 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCC--CEEEEEECTTEEEEEC-------CEEEEEEETTSSCSB
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhh--cccccccccccccchhhhccccccccccccCCcccccc
Confidence 778899997433 44577889999999999999997765 334578888877643 245778876543
Q ss_pred ---eEEEEEeccHHHHHHHHHHh
Q psy3487 83 ---QTFHIKASNEVERQRWVTAL 102 (538)
Q Consensus 83 ---~~~~L~A~s~~e~~~Wi~al 102 (538)
++.-|.|++..+.+.|...+
T Consensus 618 ~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 618 KDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp TTBSEEEEEESSHHHHHHHHHHH
T ss_pred chhhhhhhhccccccchhhHHhh
Confidence 56789999999999999887
No 103
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=90.84 E-value=0.78 Score=39.05 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=71.2
Q ss_pred CCCCcceEEEEEeEcCCCCCceEEEEEEeCCEEEEEeccc---ccCCceeEEEEccceeeec----CCceEEEEEeCc--
Q psy3487 12 SHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA---EMSHTCRGTISLRGAIIQT----EDSCTFIISNGV-- 82 (538)
Q Consensus 12 ~~~~~~~~G~L~K~~~~~k~Wk~RwFvL~~~~L~Yyk~~~---d~~~~~~g~i~L~~~~i~~----~~~~~F~i~t~~-- 82 (538)
..+.+.+.|++.-+... +.=+.|++=|=+..|-+.|-.. .....-+..|.|..+.+.. +++++|+|-...
T Consensus 6 ~~G~Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~ 84 (119)
T 1fho_A 6 KLGRIIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLP 84 (119)
T ss_dssp CCCCSSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTTCCEEEEECCSTTCC
T ss_pred HcCCccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCCCCCcEEEEccCCCC
Confidence 46788999999988764 3456677777787888887552 1123446789999888742 457789996654
Q ss_pred eEEEE--EeccHH-HHHHHHHHhHhhhhh
Q psy3487 83 QTFHI--KASNEV-ERQRWVTALELAKSK 108 (538)
Q Consensus 83 ~~~~L--~A~s~~-e~~~Wi~al~~a~~~ 108 (538)
..|.+ +|.+.. .++.|+..|+...+.
T Consensus 85 ~~~il~~qA~s~e~~K~~Wv~~I~~~~~~ 113 (119)
T 1fho_A 85 SFRIKPKDFETSEYVRKAWLRDIAEEQEK 113 (119)
T ss_dssp CBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred ceEEEeeecCCcHHHHHHHHHHHHHHHHH
Confidence 67788 999999 999999999986554
No 104
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=85.50 E-value=1.6 Score=42.47 Aligned_cols=48 Identities=17% Similarity=0.308 Sum_probs=40.0
Q ss_pred EEEEccceeee------cCCceEEEEEeCc--eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 59 GTISLRGAIIQ------TEDSCTFIISNGV--QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 59 g~i~L~~~~i~------~~~~~~F~i~t~~--~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
+.++|.-|.+. ..+++.|+|.++. .+..|+|+|..++.+|+++|..++
T Consensus 206 ~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp EEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 67888888863 1257899999875 789999999999999999998764
No 105
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=83.94 E-value=2 Score=39.09 Aligned_cols=48 Identities=17% Similarity=0.308 Sum_probs=39.9
Q ss_pred EEEEccceeee------cCCceEEEEEeCc--eEEEEEeccHHHHHHHHHHhHhhh
Q psy3487 59 GTISLRGAIIQ------TEDSCTFIISNGV--QTFHIKASNEVERQRWVTALELAK 106 (538)
Q Consensus 59 g~i~L~~~~i~------~~~~~~F~i~t~~--~~~~L~A~s~~e~~~Wi~al~~a~ 106 (538)
..|+|.-|-|. +.+++.|+|+++. .+-.|+|.|..+.+.|+++|...+
T Consensus 121 ~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 57889888873 1256899999876 789999999999999999998654
No 106
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=68.56 E-value=22 Score=40.01 Aligned_cols=80 Identities=10% Similarity=0.069 Sum_probs=50.8
Q ss_pred EEEEeEcCCCCCceEEEEEEeC--CEEEEEecccccCCceeEEEEcccee-eec------------------------CC
Q psy3487 20 GWLFKWTNYLKGYQKRWFVLSN--GLLSYYRNQAEMSHTCRGTISLRGAI-IQT------------------------ED 72 (538)
Q Consensus 20 G~L~K~~~~~k~Wk~RwFvL~~--~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~------------------------~~ 72 (538)
-.|.|++.....-++|+|.|+. ..|+|.....+ .+.|.|..+. |.. ..
T Consensus 21 t~~~K~~~~~~~~k~~~frLd~d~~~l~W~~~~k~-----~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e 95 (799)
T 2zkm_X 21 ERFIKWDDETTVASPVILRVDPKGYYLYWTYQSKE-----MEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFL 95 (799)
T ss_dssp EEEEEECTTTCCEEEEEEEECTTSCEEEEEETTSC-----EEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGG
T ss_pred CEEEEEcCCCcceeEEEEEEcCCCCEEEEccCCCc-----CceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccc
Confidence 3466776533222678899973 45666643322 2477776554 210 12
Q ss_pred ceEEEEEeCc-----eEEEEEeccHHHHHHHHHHhHh
Q psy3487 73 SCTFIISNGV-----QTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 73 ~~~F~i~t~~-----~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
..+|.|..+. +...|.|.++.+++.|+..|+.
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~ 132 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLA 132 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHH
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHH
Confidence 3578887765 3589999999999999988764
No 107
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=60.60 E-value=40 Score=37.92 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=53.7
Q ss_pred EEEEeEcCCCCCceEEEEEEeC--CEEEEEecccccCCceeEEEEcccee-eec----------------------C---
Q psy3487 20 GWLFKWTNYLKGYQKRWFVLSN--GLLSYYRNQAEMSHTCRGTISLRGAI-IQT----------------------E--- 71 (538)
Q Consensus 20 G~L~K~~~~~k~Wk~RwFvL~~--~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~~----------------------~--- 71 (538)
-+|.|++...+..++|.|.|+. ..|+|..+..+. ...|.|..+. |.. +
T Consensus 26 ~~~~K~~~~s~~~~~~~f~lD~d~~~L~W~~~~k~~----~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~ 101 (816)
T 3qr0_A 26 DKFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGKED----TQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPL 101 (816)
T ss_dssp EEEEEECTTCCCCEEEEEEECTTSCEEEECCTTCSS----CEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCH
T ss_pred CeEEEECCCCCcceeEEEEEcCCCCEEEEeCCCCCc----CcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccc
Confidence 4678988866666789999983 555554333322 1467766544 210 0
Q ss_pred CceEEEEEeCc-----eEEEEEeccHHHHHHHHHHhHh
Q psy3487 72 DSCTFIISNGV-----QTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 72 ~~~~F~i~t~~-----~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
...+|.|..+. +..+|.|.+..+.+.|+..|+.
T Consensus 102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~ 139 (816)
T 3qr0_A 102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFS 139 (816)
T ss_dssp HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHH
T ss_pred cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHH
Confidence 23688887765 3448999999999999987764
No 108
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=57.25 E-value=50 Score=37.48 Aligned_cols=80 Identities=13% Similarity=0.148 Sum_probs=50.5
Q ss_pred EEEEeEcCCCCCceEEEEEEe-C-CEEEEEecccccCCceeEEEEcccee-ee------------------------cCC
Q psy3487 20 GWLFKWTNYLKGYQKRWFVLS-N-GLLSYYRNQAEMSHTCRGTISLRGAI-IQ------------------------TED 72 (538)
Q Consensus 20 G~L~K~~~~~k~Wk~RwFvL~-~-~~L~Yyk~~~d~~~~~~g~i~L~~~~-i~------------------------~~~ 72 (538)
.++.|++.....-+.+.|.|+ + ..|+|.....+ ...|.|..+. |. ...
T Consensus 25 t~f~K~~~~~~~~k~~~frLD~d~~~L~W~~~~ke-----~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~~~~e 99 (885)
T 3ohm_B 25 SKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPNME-----VDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPDARLE 99 (885)
T ss_dssp EEEEEECTTCCSCCEEEEEECTTSCEEEEECGGGC-----EEEEEGGGEEEEEETTTSCCCCSHHHHHCC---------C
T ss_pred CeEEEECCCCCCcEEEEEEECCCCCEEEEeCCCCC-----CceEeeehhhhhhcCcCCCCCccHHHHHHhccCcccCccc
Confidence 457788765433467788897 3 45555542222 1356665433 11 112
Q ss_pred ceEEEEEeCc-----eEEEEEeccHHHHHHHHHHhHh
Q psy3487 73 SCTFIISNGV-----QTFHIKASNEVERQRWVTALEL 104 (538)
Q Consensus 73 ~~~F~i~t~~-----~~~~L~A~s~~e~~~Wi~al~~ 104 (538)
..+|.|..+. +..+|.|.++.+.+.|+..|+.
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~ 136 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFK 136 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHH
Confidence 4678887765 3689999999999999876654
No 109
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=53.61 E-value=98 Score=27.68 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=55.1
Q ss_pred CCceEEEEEEe-----CCEEEEEeccccc-C-CceeEEEEccceee-ec--CCceEEEEEeCceEEEEEeccHHHHHHHH
Q psy3487 30 KGYQKRWFVLS-----NGLLSYYRNQAEM-S-HTCRGTISLRGAII-QT--EDSCTFIISNGVQTFHIKASNEVERQRWV 99 (538)
Q Consensus 30 k~Wk~RwFvL~-----~~~L~Yyk~~~d~-~-~~~~g~i~L~~~~i-~~--~~~~~F~i~t~~~~~~L~A~s~~e~~~Wi 99 (538)
.+-|.|+.+|. .+....+|..... . ..-.-+.+|..... .. ..+..|.|+. +++|+..|++..|+..++
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl-~K~Y~W~a~s~~Er~~FI 140 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTM-SKKYYWETNSAKERTVFI 140 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEES-SSEEEEECSSHHHHHHHH
T ss_pred CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCCCCcEEEEe-CCeEEEecCCHHHHHHHH
Confidence 46789999884 3556666655322 2 23344678887663 32 3578899988 599999999999999999
Q ss_pred HHhHhhhhh
Q psy3487 100 TALELAKSK 108 (538)
Q Consensus 100 ~al~~a~~~ 108 (538)
.+|-..-..
T Consensus 141 ~sL~K~y~k 149 (171)
T 3hie_A 141 KSLITLYIQ 149 (171)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998765443
No 110
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=51.02 E-value=93 Score=30.40 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=57.2
Q ss_pred CCCceEEEEEEe-----CCEEEEEeccc--ccCCceeEEEEccceeeec---CCceEEEEEeCceEEEEEeccHHHHHHH
Q psy3487 29 LKGYQKRWFVLS-----NGLLSYYRNQA--EMSHTCRGTISLRGAIIQT---EDSCTFIISNGVQTFHIKASNEVERQRW 98 (538)
Q Consensus 29 ~k~Wk~RwFvL~-----~~~L~Yyk~~~--d~~~~~~g~i~L~~~~i~~---~~~~~F~i~t~~~~~~L~A~s~~e~~~W 98 (538)
.+.-|.||.+|. .+.+..+|... +-.....-+++|....... ..+..|.|.. ++.|+..|++..|+..+
T Consensus 131 ~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~~~~~gF~LTl-~K~YyW~A~s~kER~~F 209 (320)
T 3a58_A 131 LENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTM-SKKYYWETNSAKERTVF 209 (320)
T ss_dssp GGGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECSSCTTEEEEES-SSEEEEEESSHHHHHHH
T ss_pred ccccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcccCCCCceEEEe-CCceEEecCCHHHHHHH
Confidence 466889999884 35566666543 2223344568888877443 5668898888 79999999999999999
Q ss_pred HHHhHhhhhh
Q psy3487 99 VTALELAKSK 108 (538)
Q Consensus 99 i~al~~a~~~ 108 (538)
|..|-..-.+
T Consensus 210 I~sLvKiy~K 219 (320)
T 3a58_A 210 IKSLITLYIQ 219 (320)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998765443
No 111
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=47.60 E-value=1.3e+02 Score=25.35 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=50.5
Q ss_pred CCceEEEEEEeCCEEEEEecccccC---CceeEEEEcccee---eecCCceEEEEEe------CceEEEEEeccHHHHHH
Q psy3487 30 KGYQKRWFVLSNGLLSYYRNQAEMS---HTCRGTISLRGAI---IQTEDSCTFIISN------GVQTFHIKASNEVERQR 97 (538)
Q Consensus 30 k~Wk~RwFvL~~~~L~Yyk~~~d~~---~~~~g~i~L~~~~---i~~~~~~~F~i~t------~~~~~~L~A~s~~e~~~ 97 (538)
.+-..|=+++++..+..-=.+.... ..-.-+++++.+. +....|.-|.|.. ..+.|.|.|.++.|+.+
T Consensus 25 ~~~~ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~E 104 (121)
T 3ulb_A 25 INKHERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTE 104 (121)
T ss_dssp EEEEEEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHH
T ss_pred cccccEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHH
Confidence 3455677888887776554332110 0112467777544 3445667775533 13899999999999999
Q ss_pred HHHHhHhhhhh
Q psy3487 98 WVTALELAKSK 108 (538)
Q Consensus 98 Wi~al~~a~~~ 108 (538)
-+..|+...+.
T Consensus 105 IV~~ik~~~~~ 115 (121)
T 3ulb_A 105 IVTRLQNLLSA 115 (121)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999876554
No 112
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=23.30 E-value=4.3e+02 Score=24.07 Aligned_cols=70 Identities=17% Similarity=0.195 Sum_probs=44.0
Q ss_pred EEEEEeC--CEEEEEecccccC-----CceeEEEEcccee-eec--------C----------CceEEEEEeCc-eEEEE
Q psy3487 35 RWFVLSN--GLLSYYRNQAEMS-----HTCRGTISLRGAI-IQT--------E----------DSCTFIISNGV-QTFHI 87 (538)
Q Consensus 35 RwFvL~~--~~L~Yyk~~~d~~-----~~~~g~i~L~~~~-i~~--------~----------~~~~F~i~t~~-~~~~L 87 (538)
||+.|.. ..|.|-..++... ......|+|..+. |.. + .++.|.|.... ..+.|
T Consensus 51 ~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~~~~~~~laFSii~~~~~~L~f 130 (203)
T 3a98_B 51 WYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNF 130 (203)
T ss_dssp EEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC--------CCTTGGGEEEEEETTTEEEEE
T ss_pred EEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCccccccccccccCcccceEEEEecCCCceEEE
Confidence 4677763 5666655443110 1123578887665 210 0 12578766544 79999
Q ss_pred EeccHHHHHHHHHHhHh
Q psy3487 88 KASNEVERQRWVTALEL 104 (538)
Q Consensus 88 ~A~s~~e~~~Wi~al~~ 104 (538)
-|.|..+...|+.-|..
T Consensus 131 vA~s~~~~~~W~DGL~~ 147 (203)
T 3a98_B 131 IAPDKHEYCIWTDGLNA 147 (203)
T ss_dssp ECSSHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHH
Confidence 99999999999988764
No 113
>4emo_A Sharpin; pleckstrin homology (PH) domain, lubac, SIPL1, linear ubiqui HOIL-1L, HOIP, protein binding; 2.00A {Homo sapiens}
Probab=22.21 E-value=1.3e+02 Score=24.99 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=33.4
Q ss_pred EEEEccceeeecCCceEEEEEeCc---eEEEEEeccHHHHHHHHHHhHhhhhh
Q psy3487 59 GTISLRGAIIQTEDSCTFIISNGV---QTFHIKASNEVERQRWVTALELAKSK 108 (538)
Q Consensus 59 g~i~L~~~~i~~~~~~~F~i~t~~---~~~~L~A~s~~e~~~Wi~al~~a~~~ 108 (538)
-.++|..+.-....+.+-++..+. -++.|...+++|.++|...++.+...
T Consensus 72 ~Ew~LeSV~ytvrgP~~hELqpp~~gpg~lsl~F~~~qeAQrWA~lv~~a~~e 124 (129)
T 4emo_A 72 LEWPLESVSYTIRGPTQHELQPPPGGPGTLSMHFLNPQEAQRWAVLVRGATVE 124 (129)
T ss_dssp EEEEGGGSEEEEEETTEEEEECCTTSSCCEEEEESSHHHHHHHHHHHHHHCC-
T ss_pred eEeecceeEEEecCcccccccCCCCCCCeEEEeeCCHHHHHHHHHHHHhhhcc
Confidence 356676655444445555555432 67889999999999998877766443
No 114
>2c5i_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.3A {Saccharomyces cerevisiae}
Probab=20.66 E-value=26 Score=21.54 Aligned_cols=10 Identities=40% Similarity=0.730 Sum_probs=2.6
Q ss_pred eccccCCCce
Q psy3487 156 SEQVSHHPPI 165 (538)
Q Consensus 156 ~EQVSHHPPi 165 (538)
+||++|--|+
T Consensus 1 aeqItHKK~l 10 (29)
T 2c5i_P 1 AEQISHKKSL 10 (29)
T ss_dssp ------CCCC
T ss_pred CccccccCCc
Confidence 5788877665
Done!