RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3487
(538 letters)
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4,
KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 433
Score = 145 bits (367), Expect = 6e-39
Identities = 45/307 (14%), Positives = 100/307 (32%), Gaps = 57/307 (18%)
Query: 88 KASNEVERQRWVTALELAKSKARQHALVAAFSTSAY-------STTAVRTGKPFNPLLGE 140
+++ ++ + E+ + + V + S + + KP NP LGE
Sbjct: 57 FINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGE 116
Query: 141 TYECDRTADAGWKA-----FSEQVSHHPPIAAQYVEGKA--WKAWQDLAVHSKFRGKYIQ 193
+ + SEQVSHHPP+ A + K + + F K +
Sbjct: 117 LFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASF-TKSLM 175
Query: 194 VTPAGRFNLVFTKSNQHYTWNRVQSTVHNVIVGNLWVDQHGESDVINVTTGSTCRLTFYP 253
+T + + ++ Y + ++V + +V+ G+S I +TG C + F
Sbjct: 176 LTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKS-YIQSSTGLLCVIEFSG 234
Query: 254 YSYFSRQTQRRVLPWKPNTPRRSIIPEKPPGSMQIWSILKNSIGKDLSTIPMPLNFSEPL 313
YFS + +I+ K+S K+
Sbjct: 235 RGYFSG-KKNSF-------------------KARIYKDSKDSKDKE-------------- 260
Query: 314 SMLQRLTEDFEYAHVLDEAAATDDVFRAPQYYCFTKFACQLNEL----EEGVAPTDSRLR 369
L ++ + + + +A ++ + +Y + + + E+ +
Sbjct: 261 KALYTISGQWSGSSKIIKANKKEE---SRLFYDAARIPAEHLNVKPLEEQHPLESRKAWY 317
Query: 370 PDQRLLE 376
++
Sbjct: 318 DVAGAIK 324
Score = 92.4 bits (229), Expect = 1e-20
Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 46/186 (24%)
Query: 285 SMQIWSILKNSI---GKDLSTIPMPLNFSEPLSMLQRLTEDFEYAHVLDEAAATDDVFRA 341
S W+ SI DLS++ P P+S+ + E+ + E + +D
Sbjct: 5 SSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYK 64
Query: 342 PQY-------------------YCFTKFACQ------------------LNELEEGVAPT 364
+ + Q L EL G
Sbjct: 65 EHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWEN 124
Query: 365 DSRLRPDQRLL---EVSHHPPIAAQYVEGKA--WKAWQDLAVHSKFRGKYIQVTPAGRFN 419
+ +L +VSHHPP+ A + K + + F K + +T +
Sbjct: 125 KEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASF-TKSLMLTVKQFGH 183
Query: 420 LVFTKS 425
+
Sbjct: 184 TMLDIK 189
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 74.4 bits (182), Expect = 6e-17
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS---- 73
G+ K +K +++R+F L + Y+++ E+ I L+ E
Sbjct: 5 KAGYCVKQGAVMKNWKRRYFQLDENTIGYFKS--ELEKEPLRVIPLKEVHKVQECKQSDI 62
Query: 74 ----CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKAR 110
F I +TF+++A + E W+ A+ A R
Sbjct: 63 MMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 103
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 72.9 bits (178), Expect = 1e-16
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS 73
S +G+L K +K ++ RWF L L Y+++Q MS + L D
Sbjct: 2 SLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQ--MSPEPIRILDLTECSAVQFDY 59
Query: 74 -----CTFIISNGVQTFHIKASNEVERQRWVTALELAKSK 108
F + +TF++ A VE W+ L S+
Sbjct: 60 SQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 99
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 73.0 bits (178), Expect = 3e-16
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVL-SNGLLSYYRNQAEMSHTCRGTISLRGAIIQTED 72
+G+L K + K ++ R FVL + +Y + ++ + G SLRG+++ +
Sbjct: 9 GTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALE 68
Query: 73 S--------------CTFIISNGVQTFHIKASNEVERQRWVTALE 103
+I+ ++I+AS++ ER W+ A++
Sbjct: 69 DNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIK 113
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 71.8 bits (175), Expect = 8e-16
Identities = 21/127 (16%), Positives = 49/127 (38%), Gaps = 28/127 (22%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ---- 69
+ + +GWL K +K +++RWF+L++ L Y+ RG I L I+
Sbjct: 3 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEY--TTDKEPRGIIPLENLSIREVLD 60
Query: 70 ----------------------TEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKS 107
++ ++ + I A + E++ W+ +++ + S
Sbjct: 61 PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120
Query: 108 KARQHAL 114
+ + +
Sbjct: 121 RDPFYDM 127
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 69.6 bits (169), Expect = 3e-15
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 12/108 (11%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS 73
S +G L+K ++K ++ RWFVL M C+G I L +
Sbjct: 6 SGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGT 65
Query: 74 ------------CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
F + + ++ A + Q+WV ++ S
Sbjct: 66 PTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 69.2 bits (168), Expect = 4e-15
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 19 KGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS----- 73
+G L K + K ++ R F+L + + G I LRG ++ + +S
Sbjct: 5 QGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGR 64
Query: 74 ------CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
II+ + ++A+ ER W+ A+++A
Sbjct: 65 KSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 102
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 68.0 bits (165), Expect = 1e-14
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 17/111 (15%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS 73
S GWL K + +K +Q+R+FVL L YY+++ +G + L G I+ +
Sbjct: 6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDE--EDTKPQGCMYLPGCTIKEIAT 63
Query: 74 C---------------TFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
G ++ + AS++ E + WV L
Sbjct: 64 NPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 66.9 bits (162), Expect = 3e-14
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS---- 73
+G+L K + ++ W VL + +Y+ + ++ +G I L+G+ + +
Sbjct: 7 REGYLVKKGSVFNTWKPMWVVLLEDGIEFYKK--KSDNSPKGMIPLKGSTLTSPCQDFGK 64
Query: 74 ---CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
I + Q +A+ ER WV + A
Sbjct: 65 RMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKA 99
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 64.5 bits (156), Expect = 2e-13
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 19 KGWLFK----WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS- 73
+G+L K + + +QKRW V+S GL YY N E S +GT ++G ++
Sbjct: 4 QGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYAN--EKSKQPKGTFLIKGYSVRMAPHL 61
Query: 74 --------CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
C + S +T+ A++ E + WV +
Sbjct: 62 RRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 101
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 66.5 bits (161), Expect = 4e-13
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 14 SDAEMKGWLFK----WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ 69
G+L K + +QKRW LS + YY + + +G ++ G ++
Sbjct: 102 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGS--DKDKQQKGEFAIDGYDVR 159
Query: 70 TEDS---------CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
++ C I + + + A++ + + WV L+
Sbjct: 160 MNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 204
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2
(beta-adrenergic receptor kinase 1) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 119
Score = 62.0 bits (149), Expect = 2e-12
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 11 ASHSDAEMKGWLFKWT-NYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCR-GTISLRGAII 68
A D M G++ K +L +Q+R+F L L + I
Sbjct: 5 ALGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAPQSLLTMEEIQSVEETQ 64
Query: 69 QTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQ 111
E C + G + F ++ ++ E +W L A +A+Q
Sbjct: 65 IKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDAYREAQQ 107
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 61.1 bits (147), Expect = 6e-12
Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 31/123 (25%)
Query: 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAII-- 68
+ S M WL K LK + K W VL G+L Y+ + + GT+ L I
Sbjct: 3 SGSSGIVMADWL-KIRGTLKSWTKLWCVLKPGVLLIYKT--QKNGQWVGTVLLNACEIIE 59
Query: 69 --------------------------QTEDSCTFIISNGVQTFHIKASNEVERQRWVTAL 102
+ E + I+A++E + + W+ AL
Sbjct: 60 RPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDAL 119
Query: 103 ELA 105
ELA
Sbjct: 120 ELA 122
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 59.9 bits (144), Expect = 8e-12
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 18 MKGWLFK-WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS--- 73
++GWL K ++ L+ +++RWFVLS L YY++ + G++ L I+ +
Sbjct: 11 IRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKD--SREESVLGSVLLPSYNIRPDGPGAP 68
Query: 74 -----CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
G++T+ + A + + W+ AL A
Sbjct: 69 RGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 105
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 59.5 bits (143), Expect = 9e-12
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 19 KGWLFKWT-NYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGA-IIQTEDSCTF 76
GWL K + + +QKRW +SYY N+ +G I L ++ + F
Sbjct: 4 SGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNE--KEMYSKGIIPLSAISTVRVQGDNKF 61
Query: 77 IISNGVQTFHIKASNEVERQRWVTALELAKSKAR 110
+ +TF + E ER W++ L A
Sbjct: 62 EVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 95
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 59.7 bits (143), Expect = 9e-12
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Query: 11 ASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRN----QAEMSHTCRGTISLRGA 66
+ S + M G+L++ K ++ WFV+ N +L Y A S G
Sbjct: 3 SGSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVK 62
Query: 67 IIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+E ++ G+ + KA + QRW+ A +
Sbjct: 63 DENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSG 105
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for
secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 59.6 bits (143), Expect = 1e-11
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 11/114 (9%)
Query: 11 ASHSDAEMKGWLFKW-TNYLKGYQKRWFVLSNG--LLSYYRNQAEMSHTCRGTISLRGAI 67
+ S + G+L+ N K ++KR+FVL + E + + L G
Sbjct: 3 SGSSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYT 62
Query: 68 IQTEDS--------CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHA 113
+ D F T + +E +R WV A+ A ++ +
Sbjct: 63 VDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPV 116
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 58.8 bits (141), Expect = 2e-11
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 14 SDAEMKGWLFK----WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ 69
G+L K + +QKRW LS + YY + + +G ++ G ++
Sbjct: 7 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGS--DKDKQQKGEFAIDGYDVR 64
Query: 70 TEDS---------CTFIISNGVQTFHIKASNEVERQRWVTALELA 105
++ C I + + + A++ + + WV L+
Sbjct: 65 MNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 109
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 57.3 bits (137), Expect = 5e-11
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 17 EMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTE----- 71
E +L N ++ RW + + L +Y+++ S + +SL G + +
Sbjct: 2 ETSSYLNVLVN--SQWKSRWCSVRDNHLHFYQDR-NRSKVAQQPLSLVGCEVVPDPSPDH 58
Query: 72 DSCTFIISNGVQTFHIKASNEVERQRWVTALELA 105
I+ G + ++A + E W+ L
Sbjct: 59 LYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 92
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 55.8 bits (133), Expect = 2e-10
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Query: 16 AEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDSC- 74
+ G L+ + +FVL++ + Y + + I+ E
Sbjct: 1 SIKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQIAIRPEGKNN 60
Query: 75 ------TFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+ S + + A ++ E Q WV + A
Sbjct: 61 RLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQTA 101
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing
protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 54.6 bits (130), Expect = 4e-10
Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 9/96 (9%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNG-LLSYYRNQAEMSHTCRGTISLRGAIIQTEDSC-- 74
+ G L + + + + W + + TI L + D
Sbjct: 3 LCGPLRLSESG-ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEER 61
Query: 75 -----TFIISNGVQTFHIKASNEVERQRWVTALELA 105
+ + Q++++ AS+ +Q+W+ L A
Sbjct: 62 LDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTA 97
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 54.6 bits (130), Expect = 5e-10
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 19/103 (18%)
Query: 15 DAEMKGWLFKWTNYLKGYQKRWFVLSNG-------LLSYYRNQAEM---SHTCRGTISLR 64
D G+L K K KR+FVL L YY N+ + S + +I L
Sbjct: 1 DVRKVGYLRK----PKSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLE 56
Query: 65 GAII-----QTEDSCTFIISNGVQTFHIKASNEVERQRWVTAL 102
+++ + + F I A +E E+ W AL
Sbjct: 57 SCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQAL 99
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 54.6 bits (130), Expect = 7e-10
Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYY----RNQAEMSHTCRGTISLRGAIIQTEDS 73
+GWL K Y+K ++ R+F+L N + S+ + +
Sbjct: 9 KEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER 68
Query: 74 ---CTFIIS----NGVQTFHIKASNEVERQRWVTALELAKSKARQ 111
TFII V ER+ W TA++ ++
Sbjct: 69 PRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 113
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 54.5 bits (130), Expect = 9e-10
Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 14 SDAEMKGWLFKWTNYL--------KGYQKRWFVLSNGLLSYYRNQAE------MSHTCRG 59
+ +G++ + + + + K + G +S+Y++Q ++
Sbjct: 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEP 65
Query: 60 TISLRGAIIQTEDS------CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+ L+ A I+ + F ++A ++ E +WVT+L+
Sbjct: 66 SYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDST 121
>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 53.2 bits (127), Expect = 4e-09
Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 6/118 (5%)
Query: 2 SALNTTDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTI 61
+ N ++ G + K ++R +L+ G YY + +G I
Sbjct: 34 AGGNPWHQFVENNLILKMGPVDKRKG--LFARRRQLLLTEGPHLYYVDPVNK--VLKGEI 89
Query: 62 SL-RGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALVAAF 118
+ + ++ TF + +T+++ + +W ++ + Q AA
Sbjct: 90 PWSQELRPEAKNFKTFFVHTPNRTYYLMDPSG-NAHKWCRKIQEVWRQRYQSHPDAAV 146
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 53.0 bits (126), Expect = 4e-09
Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 9 IKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRN----QAEMSHTCRGTISLR 64
+K + +G+L + + Y+ W L L +Y + L
Sbjct: 4 LKITALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLT 63
Query: 65 GAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTAL 102
++ F + + +K N + W +
Sbjct: 64 EQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFI 101
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 52.7 bits (125), Expect = 5e-09
Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 17/113 (15%)
Query: 16 AEMKGWLF----------KWTNYLKGYQKRWFVLSNGLLSYYRNQAEM--SHTCRGTISL 63
A +GWL + ++ +++ + VL L Y+++ E IS+
Sbjct: 1 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISV 60
Query: 64 RGAIIQ-----TEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQ 111
+I T+ F ++ +A + + W+ ++ + + +
Sbjct: 61 NACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNLNEE 113
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 51.9 bits (123), Expect = 7e-09
Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 18 MKGWLFKWTNY-LKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQT------ 70
+ G+L N + +R+F+L + G ++ +
Sbjct: 17 ICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSI 76
Query: 71 -------EDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+ F+I+ Q + ++A+++ + + WV AL A
Sbjct: 77 ATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSG 122
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 50.5 bits (119), Expect = 1e-08
Identities = 15/106 (14%), Positives = 41/106 (38%), Gaps = 18/106 (16%)
Query: 18 MKGWLFKWTNYL--------KGYQKRWFVLSNGLLSYYRNQAEMSHTC----RGTISLRG 65
M+G+L + + + + + V++N + +Y++ + +SL+
Sbjct: 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKE 60
Query: 66 AIIQ------TEDSCTFIISNGVQTFHIKASNEVERQRWVTALELA 105
AI + + + + + +A ++ E W+ A+ A
Sbjct: 61 AICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 49.6 bits (117), Expect = 3e-08
Identities = 9/93 (9%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Query: 17 EMKGWLFKWTN---YLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDS 73
G+L + ++++ G L + + ED
Sbjct: 6 RKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDR 65
Query: 74 ---CTFIISNGVQTFHIKASNEVERQRWVTALE 103
+G ++ ++A ++ + + W+ +
Sbjct: 66 RYCFQITSFDGKKSSILQAESKKDHEEWICTIN 98
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2
isoform [TaxId: 9606]}
Length = 123
Score = 50.0 bits (118), Expect = 3e-08
Identities = 16/117 (13%), Positives = 36/117 (30%), Gaps = 18/117 (15%)
Query: 11 ASHSDAEMKGWLFKWTNYL--------KGYQKRWFVLSNGLLSYYRNQAEMS-------- 54
+ S +M+G L + + +Q + VL G L +Y++ S
Sbjct: 3 SGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGE 62
Query: 55 --HTCRGTISLRGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+ + + + + +A +E E W+ + A +
Sbjct: 63 VPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG 119
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 48.7 bits (115), Expect = 1e-07
Identities = 13/117 (11%), Positives = 32/117 (27%), Gaps = 21/117 (17%)
Query: 14 SDAEMKGWLFK--------WTNYLKGYQKRWFVLSNGLLSYYRN----QAEMSHTCRGTI 61
D + +G L +QK +L + + + +I
Sbjct: 16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSI 75
Query: 62 SLRG--------AIIQTEDSCTF-IISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
L + E TF + + ++ + +++ WV ++
Sbjct: 76 PLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSG 132
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 49.1 bits (116), Expect = 1e-07
Identities = 18/124 (14%), Positives = 36/124 (29%), Gaps = 38/124 (30%)
Query: 18 MKGWLFKWTN-----YLKGYQKRWFVLSNGLLSYYRNQAE--MSHTCRGTISLRGA---- 66
++ K + ++K F+L+ LSYY E + +G+I +
Sbjct: 5 LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVE 64
Query: 67 ---------------------------IIQTEDSCTFIISNGVQTFHIKASNEVERQRWV 99
I F + ++ + E R+RW+
Sbjct: 65 TVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWI 124
Query: 100 TALE 103
L+
Sbjct: 125 HQLK 128
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 47.4 bits (111), Expect = 5e-07
Identities = 17/117 (14%), Positives = 41/117 (35%), Gaps = 15/117 (12%)
Query: 13 HSDAEMKGWLFK------WTNYLKGYQKRWFVLSNGL-----LSYYRNQAEMSHTCRGTI 61
GWL+K + ++ +++R+F L L++Y+++
Sbjct: 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIF 74
Query: 62 SLRGAIIQTEDS----CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHAL 114
+ + + ++ + A +EVE + W+T L + A+
Sbjct: 75 LDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAM 131
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 44.6 bits (104), Expect = 2e-06
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 14/101 (13%)
Query: 19 KGWLFK--WTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQTEDSC-- 74
KGWL G ++ WFVL+ LS+Y++ E ++ +
Sbjct: 6 KGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSS 65
Query: 75 ----------TFIISNGVQTFHIKASNEVERQRWVTALELA 105
+ + + + E W + A
Sbjct: 66 KHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 106
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 44.0 bits (103), Expect = 4e-06
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTC------RGTISLRGAIIQTE 71
+ + ++R+F+L + +L MS + +
Sbjct: 30 FMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEG 89
Query: 72 DSCTFII-SNGVQTFHIKASNEVERQRWVTALE 103
C F I + V+ + +N + Q W+ L
Sbjct: 90 SDCMFEITGSTVERIVVHCNNNQDFQEWMEQLN 122
>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 112
Score = 40.3 bits (93), Expect = 7e-05
Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 24/109 (22%)
Query: 19 KGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISL--------------- 63
+GW+ ++N ++ ++ L ++ ++N ++ I L
Sbjct: 4 EGWVVHYSNKDTLRKRHYWRLDCKCITLFQN--NTTNRYYKEIPLSEILTVESAQNFSLV 61
Query: 64 ------RGAIIQTEDSCTFIISN-GVQTFHIKASNEVERQRWVTALELA 105
I T ++ F+ G + W TA+ A
Sbjct: 62 PPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQA 110
>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 119
Score = 39.9 bits (93), Expect = 1e-04
Identities = 12/104 (11%), Positives = 29/104 (27%), Gaps = 18/104 (17%)
Query: 18 MKGWLF-KWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISL------------- 63
+KG K + ++ + + + + ++ M S+
Sbjct: 12 LKGSQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTE 71
Query: 64 --RGAIIQTEDSCTF--IISNGVQTFHIKASNEVERQRWVTALE 103
+ F + + T + A + + Q WV L
Sbjct: 72 GLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLR 115
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 119
Score = 35.3 bits (81), Expect = 0.004
Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 18 MKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQA--EMSHTCRGTISLRGAIIQ--TEDS 73
W + F+ N ++ ++ + S+T +I L I+ T D
Sbjct: 12 RHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDE 71
Query: 74 CTFIISNGV-------QTFHIKASNEVERQRWVTAL 102
T ++ ++E R+ W+ +
Sbjct: 72 DTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDI 107
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 34.7 bits (79), Expect = 0.011
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 15/119 (12%)
Query: 8 DIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSY------------YRNQAEMSH 55
DI S+ G + Q+R F L + + Y+ + +M
Sbjct: 19 DILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDK 78
Query: 56 TCRGTISLRGAIIQTEDSC---TFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQ 111
I + A E+ RW+ A + ++
Sbjct: 79 YEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 137
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein
TRIO {Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 33.4 bits (76), Expect = 0.016
Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 14/100 (14%)
Query: 18 MKGWLFKWT--NYLKGYQKRWFVLSNGLLSY----YRNQAEMSHTCRGTISLRGAIIQT- 70
++ W ++ ++R L L + + + + + +
Sbjct: 15 LQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEH 74
Query: 71 --EDSCTFII-----SNGVQTFHIKASNEVERQRWVTALE 103
D C F + +KAS+ +Q W+ +
Sbjct: 75 VEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIR 114
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 33.5 bits (76), Expect = 0.020
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 19/117 (16%)
Query: 8 DIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYR---------NQAEMSHTCR 58
DI ++ M+G L + +R L +GL+ + + + +
Sbjct: 19 DIGQCCNEFIMEGTLTRV----GAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLK 74
Query: 59 GTISLRGAIIQTEDS------CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKA 109
+R I +D II + A + E+ W+ AL + ++
Sbjct: 75 EKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRS 131
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 33.1 bits (75), Expect = 0.033
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 33 QKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ---TEDSCTFIIS----NGVQTF 85
Q +L + + ++ T + L +I+ T+ FII Q +
Sbjct: 58 QDEKLLLKCHSKTAVGS-SDSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIY 116
Query: 86 HIKASNEVERQRWVTALELAKSKA 109
+ A ++ W+ LE A A
Sbjct: 117 ELVALTSSDKNTWMELLEEAVRNA 140
>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 142
Score = 32.9 bits (74), Expect = 0.035
Identities = 17/98 (17%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 19 KGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ-----TEDS 73
+ + F + ++L Q + S+G + ++ + + + I L +++ + D
Sbjct: 39 ELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNEVLVKLPTDPSGDE 98
Query: 74 CTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQ 111
F IS+ + + ++A + ER WV ++ A +
Sbjct: 99 PIFHISHIDRVYTLRAESINERTAWVQKIKAASELYIE 136
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 114
Score = 28.1 bits (62), Expect = 1.2
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 39 LSNGLLSYYRNQAEMSHTCRGTISLRGAIIQ---TEDSCTFIIS---NGVQTFHIKASNE 92
+ + A+ HT I L +++ T++ F+IS NG Q + + A
Sbjct: 39 VLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTV 98
Query: 93 VERQRWVTALE 103
E+ W +
Sbjct: 99 SEKTVWQDLIC 109
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375
{environmental samples}
Length = 109
Score = 27.1 bits (60), Expect = 2.2
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 14 SDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQ 50
+D +M+ ++ + K S GLL + N+
Sbjct: 16 NDVDMELFIDAVEKTAPVWVKEMK--SRGLLKFSMNR 50
>d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP
{Escherichia coli [TaxId: 562]}
Length = 369
Score = 28.6 bits (62), Expect = 2.3
Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 1/188 (0%)
Query: 3 ALNTTDIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTIS 62
A + K D + K + ++ A TI+
Sbjct: 168 AFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTIN 227
Query: 63 LRGAIIQTEDSCTFIISNGVQTFHIKASNEVERQRWVTALELAKSKARQHALVAAFSTSA 122
A + S + TF + S + +K + + +
Sbjct: 228 GPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTD 287
Query: 123 YSTTAVRTGKPFNPLLGETYECDRTADAGWKAFSEQVSHHPPIAAQYVEGKAWKAWQDLA 182
AV KP + ++YE + D A E + W A + A
Sbjct: 288 EGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRT-A 346
Query: 183 VHSKFRGK 190
V + G+
Sbjct: 347 VINAASGR 354
>d1ft5a_ a.138.1.3 (A:) Cytochrome c554 {Nitrosomonas europaea
[TaxId: 915]}
Length = 211
Score = 26.7 bits (58), Expect = 5.7
Identities = 10/52 (19%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 162 HPPIAAQYVEGKAWKAWQDLAVHSKFRGKYI-QVTPAGRFNLVFTKSNQHYT 212
H A + + KA + L + K K ++ PA + H
Sbjct: 15 HKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQDKDCVGCHVD 66
>d1jvna1 c.1.2.1 (A:230-552) Cyclase subunit (or domain) of
imidazoleglycerolphosphate synthase HisF {Baker's yeast
(Saccharomyces cerevisiae), His7 [TaxId: 4932]}
Length = 323
Score = 26.3 bits (57), Expect = 9.5
Identities = 6/80 (7%), Positives = 18/80 (22%), Gaps = 14/80 (17%)
Query: 8 DIKASHSDAEMKGWLFKWTNYLKGYQKRWFVLSNGLLSYYRNQAEMSHTCRGTISLRGAI 67
+I + + + + G+ + + + G
Sbjct: 69 NITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGI--------------KDIVDVDGTK 114
Query: 68 IQTEDSCTFIISNGVQTFHI 87
I + + +G I
Sbjct: 115 IPALEVASLYFRSGADKVSI 134
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.132 0.408
Gapped
Lambda K H
0.267 0.0631 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,027,010
Number of extensions: 92796
Number of successful extensions: 309
Number of sequences better than 10.0: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 54
Length of query: 538
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 448
Effective length of database: 1,171,896
Effective search space: 525009408
Effective search space used: 525009408
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.2 bits)