Your job contains 1 sequence.
>psy3489
MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG
EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKKLYELIQVKSSEQNIMDDPFIREHIEDLL
RNIRTQVMH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3489
(129 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 409 3.4e-38 1
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 407 5.5e-38 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 406 7.0e-38 1
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 406 7.0e-38 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 406 7.0e-38 1
UNIPROTKB|F1SQG5 - symbol:COPS2 "Uncharacterized protein"... 406 7.0e-38 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 406 7.0e-38 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 406 7.0e-38 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 406 7.0e-38 1
TAIR|locus:2059289 - symbol:FUS12 "FUSCA 12" species:3702... 290 1.1e-34 2
DICTYBASE|DDB_G0289361 - symbol:csn2 "proteasome componen... 265 3.4e-32 2
WB|WBGene00000814 - symbol:csn-2 species:6239 "Caenorhabd... 340 7.0e-31 1
UNIPROTKB|O01422 - symbol:csn-2 "COP9 signalosome complex... 340 7.0e-31 1
ASPGD|ASPL0000076227 - symbol:csnB species:162425 "Emeric... 240 8.7e-25 2
UNIPROTKB|G5EHS2 - symbol:MGCH7_ch7g1103 "COP9 signalosom... 237 1.2e-23 2
POMBASE|SPAPB17E12.04c - symbol:csn2 "COP9/signalosome co... 150 4.4e-15 2
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 82/115 (71%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE+F KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/115 (71%), Positives = 91/115 (79%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M LLQ+FYETTL+AL+DAKNDRLWFKTNTKLGKLYFDR DF KL +ILKQLHQSCQTDDG
Sbjct: 126 MALLQNFYETTLDALRDAKNDRLWFKTNTKLGKLYFDRSDFTKLQKILKQLHQSCQTDDG 185
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYT Q YE + +KS+ + + IRE
Sbjct: 186 EDDLKKGTQLLEIYALEIQMYTVQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 240
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I ++ NIM D FIREHIEDLLRNIRTQV+
Sbjct: 327 FETI-LRQHRSNIMADQFIREHIEDLLRNIRTQVL 360
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 132 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 191
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 192 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 246
Score = 126 (49.4 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 333 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 366
Score = 35 (17.4 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>UNIPROTKB|F1SQG5 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR011990 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
InterPro:IPR019280 Pfam:PF10075 EMBL:CU041367 EMBL:CU407149
Ensembl:ENSSSCT00000005137 ArrayExpress:F1SQG5 Uniprot:F1SQG5
Length = 385
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 117 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 176
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 177 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 231
Score = 126 (49.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 318 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 351
Score = 35 (17.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 46 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 87
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ+FYETTLEALKDAKNDRLWFKTNTKLGKLY +RE++ KL +IL+QLHQSCQTDDG
Sbjct: 125 MDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDG 184
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYEL-IQVKSSEQNIMDDPFIRE 114
EDDLKKGTQLLEIYALEIQMYTAQ YE + +KS+ + + IRE
Sbjct: 185 EDDLKKGTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRE 239
Score = 126 (49.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K++ NIMDDPFIREHIE+LLRNIRTQV+
Sbjct: 326 FEKI-LKTNHSNIMDDPFIREHIEELLRNIRTQVL 359
Score = 35 (17.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 8 YETTLEALKDAKNDRLW-FKTNTKLGKLYFDREDFNKLSRILKQL 51
++ LE L+ K + W FK ++ K+ F +F ++ KQL
Sbjct: 54 FQKVLE-LEGEKGE--WGFKALKQMIKINFKLTNFPEMMNRYKQL 95
>TAIR|locus:2059289 [details] [associations]
symbol:FUS12 "FUSCA 12" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0009585
EMBL:AC005623 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 EMBL:AF395058 EMBL:AY050437 EMBL:AY133536
EMBL:AY087622 IPI:IPI00525604 PIR:D84667 RefSeq:NP_565632.1
UniGene:At.13162 ProteinModelPortal:Q8W207 SMR:Q8W207 IntAct:Q8W207
STRING:Q8W207 PaxDb:Q8W207 PRIDE:Q8W207 EnsemblPlants:AT2G26990.1
GeneID:817241 KEGG:ath:AT2G26990 TAIR:At2g26990 eggNOG:COG5159
HOGENOM:HOG000194333 InParanoid:Q8W207 KO:K12176 OMA:SNSEPDV
PhylomeDB:Q8W207 ProtClustDB:CLSN2688459 Genevestigator:Q8W207
GermOnline:AT2G26990 Uniprot:Q8W207
Length = 439
Score = 290 (107.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 53/101 (52%), Positives = 78/101 (77%)
Query: 3 LLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGED 62
LLQ+FY+TTL+AL++AKN+RLWFKTN KL ++FD ++ ++++ILK+LH+SCQ +DG D
Sbjct: 123 LLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDGTD 182
Query: 63 DLKKGTQLLEIYALEIQMYTAQXXXXXXXXXY-ELIQVKSS 102
D KKG+QLLE+YA+EIQ+YT Y + + +KS+
Sbjct: 183 DQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSA 223
Score = 104 (41.7 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +KS+ + IMDDPFIR ++EDLL+ +RTQV+
Sbjct: 322 FERI-LKSNRRTIMDDPFIRNYMEDLLKKVRTQVL 355
>DICTYBASE|DDB_G0289361 [details] [associations]
symbol:csn2 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0289361 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CM000154_GR EMBL:AAFI02000139
Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 KO:K12176 OMA:SNSEPDV EMBL:DQ309430
RefSeq:XP_636285.1 ProteinModelPortal:Q54HL6 STRING:Q54HL6
EnsemblProtists:DDB0233100 GeneID:8627103 KEGG:ddi:DDB_G0289361
ProtClustDB:CLSZ2429788 Uniprot:Q54HL6
Length = 449
Score = 265 (98.3 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 46/103 (44%), Positives = 76/103 (73%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
++++Q ++ TL++L D KN+R+WF+TN KL KL F++ ++ +L++IL+ LH+SC+ +DG
Sbjct: 129 LDMIQKVFDLTLKSLLDTKNERVWFRTNLKLAKLLFEKAEYGRLAKILRDLHKSCELEDG 188
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYE-LIQVKSS 102
DD KKG+QL++IYALEIQMYT Y+ +++KS+
Sbjct: 189 TDDQKKGSQLVDIYALEIQMYTETKNNKKLKDLYKKALEIKSA 231
Score = 111 (44.1 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+E I +K + + IMDDPFIR +IEDLLRNIRTQV+
Sbjct: 330 FEKI-LKDNRKTIMDDPFIRMYIEDLLRNIRTQVL 363
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 8 YETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGEDDLKKG 67
YE ++ L++ + FK K+ KLYF DF+ + K+ ++ + ++KG
Sbjct: 55 YEKVVD-LENGEKGEWGFKALKKITKLYFRIGDFDNMLESFKKFLPYTKSSASSNYIEKG 113
Score = 33 (16.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 4 LQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNK 43
L+D Y+ LE + R+ GK++ +++ K
Sbjct: 218 LKDLYKKALEIKSAIPHPRIMGIIRECGGKMHMAEKEWEK 257
>WB|WBGene00000814 [details] [associations]
symbol:csn-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0018991 GO:GO:0040010
GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV EMBL:FO080100 PIR:T25440 RefSeq:NP_491740.1
ProteinModelPortal:O01422 SMR:O01422 DIP:DIP-24665N IntAct:O01422
MINT:MINT-1040695 STRING:O01422 PaxDb:O01422 PRIDE:O01422
EnsemblMetazoa:B0025.2.1 EnsemblMetazoa:B0025.2.2
EnsemblMetazoa:B0025.2.3 GeneID:172278 KEGG:cel:CELE_B0025.2
UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 340 (124.7 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 67/112 (59%), Positives = 81/112 (72%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ FYETTL+ALKDAKN+RLWFKTNTKLGKL+FD +F KL +I+KQL SC+ + G
Sbjct: 122 MDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQG 181
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYELIQVKSSEQNIMDDPFI 112
E+D +KGTQLLEIYALEIQMYT Q YEL ++ + P I
Sbjct: 182 EEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHTKSAIPHPLI 233
Score = 97 (39.2 bits), Expect = 0.00042, P = 0.00042
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 98 QVKSSEQN-IMDDPFIREHIEDLLRNIRTQVM 128
Q+ ++ Q+ IM DPFIREH E+L+ NIRTQV+
Sbjct: 328 QIMAAHQDSIMADPFIREHTEELMNNIRTQVL 359
>UNIPROTKB|O01422 [details] [associations]
symbol:csn-2 "COP9 signalosome complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV EMBL:FO080100 PIR:T25440
RefSeq:NP_491740.1 ProteinModelPortal:O01422 SMR:O01422
DIP:DIP-24665N IntAct:O01422 MINT:MINT-1040695 STRING:O01422
PaxDb:O01422 PRIDE:O01422 EnsemblMetazoa:B0025.2.1
EnsemblMetazoa:B0025.2.2 EnsemblMetazoa:B0025.2.3 GeneID:172278
KEGG:cel:CELE_B0025.2 UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 340 (124.7 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 67/112 (59%), Positives = 81/112 (72%)
Query: 1 MELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDG 60
M+LLQ FYETTL+ALKDAKN+RLWFKTNTKLGKL+FD +F KL +I+KQL SC+ + G
Sbjct: 122 MDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTKLEKIVKQLKVSCKNEQG 181
Query: 61 EDDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYELIQVKSSEQNIMDDPFI 112
E+D +KGTQLLEIYALEIQMYT Q YEL ++ + P I
Sbjct: 182 EEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHTKSAIPHPLI 233
Score = 97 (39.2 bits), Expect = 0.00042, P = 0.00042
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 98 QVKSSEQN-IMDDPFIREHIEDLLRNIRTQVM 128
Q+ ++ Q+ IM DPFIREH E+L+ NIRTQV+
Sbjct: 328 QIMAAHQDSIMADPFIREHTEELMNNIRTQVL 359
>ASPGD|ASPL0000076227 [details] [associations]
symbol:csnB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
EMBL:AACD01000081 RefSeq:XP_662387.1 STRING:Q5B3U7
EnsemblFungi:CADANIAT00005639 GeneID:2872575 KEGG:ani:AN4783.2
OrthoDB:EOG4PZNGN Uniprot:Q5B3U7
Length = 506
Score = 240 (89.5 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 42/102 (41%), Positives = 69/102 (67%)
Query: 2 ELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGE 61
+ +++FY TL + ++ N+RLW KTN KL +L+ +R ++ +LS+ +++LH++CQ +DG
Sbjct: 131 QCMEEFYSLTLNSFQNTNNERLWLKTNIKLARLWLERREYGQLSKKVRELHRACQREDGS 190
Query: 62 DDLKKGTQLLEIYALEIQMYTAQXXXXXXXXXYE-LIQVKSS 102
DD KGT LLE+YALEIQMY Y+ ++V+S+
Sbjct: 191 DDPSKGTYLLELYALEIQMYAETKNNKRLKALYQRALRVRSA 232
Score = 71 (30.1 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
YE +V S +++ DPFI E+I+++ RN+RT+ +
Sbjct: 331 YE--EVLSKNPDVLADPFIAENIDEVSRNMRTKAI 363
>UNIPROTKB|G5EHS2 [details] [associations]
symbol:MGCH7_ch7g1103 "COP9 signalosome complex subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 EMBL:CM000230 EMBL:CM001237 InterPro:IPR013143
SMART:SM00753 KO:K12176 RefSeq:XP_003720496.1
ProteinModelPortal:G5EHS2 EnsemblFungi:MGG_10325T0 GeneID:2681900
KEGG:mgr:MGG_10325 Uniprot:G5EHS2
Length = 522
Score = 237 (88.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 45/100 (45%), Positives = 66/100 (66%)
Query: 4 LQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGEDD 63
+++FY TL ++ N+RLW KTN KL KL DR+++ ++R L++LH+SC+ +DG DD
Sbjct: 134 MEEFYSLTLACFQNTNNERLWLKTNIKLCKLLLDRKEYGTVTRKLRELHKSCEREDGTDD 193
Query: 64 LKKGTQLLEIYALEIQMYTAQXXXXXXXXXYE-LIQVKSS 102
KGT LLEIYALEIQMY Y+ ++V+S+
Sbjct: 194 PSKGTYLLEIYALEIQMYAETRNNKQLKRLYQRALKVRSA 233
Score = 64 (27.6 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 94 YELIQVKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
YE + K+++ ++ DPFI E+I+++ R +RT+ +
Sbjct: 332 YEAVLKKNTD--LLADPFIAENIDEVTRTMRTKAV 364
>POMBASE|SPAPB17E12.04c [details] [associations]
symbol:csn2 "COP9/signalosome complex subunit Csn2"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAPB17E12.04c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV OrthoDB:EOG4PZNGN EMBL:AF314168 RefSeq:NP_001018220.1
ProteinModelPortal:Q9HFR0 IntAct:Q9HFR0 STRING:Q9HFR0
EnsemblFungi:SPAPB17E12.04c.1 GeneID:3361420
KEGG:spo:SPAPB17E12.04c NextBio:20811469 Uniprot:Q9HFR0
Length = 437
Score = 150 (57.9 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 2 ELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGE 61
E L+ FY+ T +AL++ N+RL K + + +++++K +L+Q+H+ ++
Sbjct: 127 EFLEKFYDVTTKALQNLNNERLMLKVLMHVARFLLTQKNYHKFKYLLRQMHELLSDENNS 186
Query: 62 -DDLKKGTQLLEIYALEIQMYT 82
D +GT LLE+Y+LEIQMY+
Sbjct: 187 VADQNRGTHLLELYSLEIQMYS 208
Score = 70 (29.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 11/30 (36%), Positives = 25/30 (83%)
Query: 99 VKSSEQNIMDDPFIREHIEDLLRNIRTQVM 128
+++ + +I+DD FIR++++ +L +IR+QV+
Sbjct: 332 LQTYQHDILDDDFIRQYVDKILYSIRSQVL 361
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 129 120 0.00091 102 3 11 22 0.49 30
29 0.48 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 546 (58 KB)
Total size of DFA: 120 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.21u 0.08s 14.29t Elapsed: 00:00:13
Total cpu time: 14.21u 0.08s 14.29t Elapsed: 00:00:13
Start: Thu Aug 15 12:27:12 2013 End: Thu Aug 15 12:27:25 2013