BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3490
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35430|APBA1_RAT Amyloid beta A4 precursor protein-binding family A member 1
OS=Rattus norvegicus GN=Apba1 PE=1 SV=1
Length = 839
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A + G+LNIGDQI+++NG SLVG
Sbjct: 659 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG 718
Query: 72 LPLSTCQTYIK 82
LPLSTCQ+ IK
Sbjct: 719 LPLSTCQSIIK 729
>sp|B2RUJ5|APBA1_MOUSE Amyloid beta A4 precursor protein-binding family A member 1 OS=Mus
musculus GN=Apba1 PE=2 SV=2
Length = 842
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A + G+LNIGDQI+++NG SLVG
Sbjct: 662 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG 721
Query: 72 LPLSTCQTYIK 82
LPLSTCQ+ IK
Sbjct: 722 LPLSTCQSIIK 732
>sp|Q02410|APBA1_HUMAN Amyloid beta A4 precursor protein-binding family A member 1 OS=Homo
sapiens GN=APBA1 PE=1 SV=3
Length = 837
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A + G+LNIGDQI+++NG SLVG
Sbjct: 657 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG 716
Query: 72 LPLSTCQTYIK 82
LPLSTCQ+ IK
Sbjct: 717 LPLSTCQSIIK 727
>sp|O17583|LIN10_CAEEL Protein lin-10 OS=Caenorhabditis elegans GN=lin-10 PE=1 SV=1
Length = 982
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/75 (68%), Positives = 60/75 (80%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
T + VVVPK GE LG+V+VESGWGSMLPTVV+A++ P G AA +LNIGDQII +NG+
Sbjct: 798 TQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPVGPAAHSNKLNIGDQIININGI 857
Query: 68 SLVGLPLSTCQTYIK 82
SLVGLPLS QT IK
Sbjct: 858 SLVGLPLSAAQTQIK 872
>sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding family A member 2
OS=Rattus norvegicus GN=Apba2 PE=1 SV=1
Length = 750
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K KGEILGVV+VESGWGS+LPTV++AN+ G AAR G+L+IGDQI+++NG SLVGLPL+
Sbjct: 574 KHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLA 633
Query: 76 TCQTYIK 82
TCQ IK
Sbjct: 634 TCQGIIK 640
>sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding family A member 2 OS=Mus
musculus GN=Apba2 PE=1 SV=2
Length = 750
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K KGEILGVV+VESGWGS+LPTV++AN+ G AAR G+L+IGDQI+++NG SLVGLPL+
Sbjct: 574 KHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLA 633
Query: 76 TCQTYIK 82
TCQ IK
Sbjct: 634 TCQGIIK 640
>sp|Q5RD33|APBA2_PONAB Amyloid beta A4 precursor protein-binding family A member 2
OS=Pongo abelii GN=APBA2 PE=2 SV=1
Length = 749
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K KGEILGVV+VESGWGS+LPTV++AN+ G AAR G+L+IGDQI+++NG SLVGLPL+
Sbjct: 573 KHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLA 632
Query: 76 TCQTYIK 82
TCQ IK
Sbjct: 633 TCQGIIK 639
>sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding family A member 2 OS=Homo
sapiens GN=APBA2 PE=1 SV=3
Length = 749
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/67 (70%), Positives = 58/67 (86%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K KGEILGVV+VESGWGS+LPTV++AN+ G AAR G+L+IGDQI+++NG SLVGLPL+
Sbjct: 573 KHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLA 632
Query: 76 TCQTYIK 82
TCQ IK
Sbjct: 633 TCQGIIK 639
>sp|O70248|APBA3_RAT Amyloid beta A4 precursor protein-binding family A member 3
OS=Rattus norvegicus GN=Apba3 PE=2 SV=2
Length = 569
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K GE LGV +VESGWGS+LPT VIANL G A RCG L+IGD++ A+NG SLVG
Sbjct: 390 VCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSIGDRVTAINGTSLVG 449
Query: 72 LPLSTCQTYIK-VNHH 86
L L+ CQ ++ V H
Sbjct: 450 LSLAACQAAVREVRRH 465
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 1 MLHLNPVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQ 60
++H PVT+ ++ P + E LG VE+G +I +L G+AA G + +G +
Sbjct: 472 IIHCPPVTTAVIHRPHVR-EQLGFC-VENG--------IICSLL-RGSAAERGGVRVGHR 520
Query: 61 IIAVNGVSLVGLP 73
II VNG S+V +P
Sbjct: 521 IIEVNGQSVVAMP 533
>sp|O88888|APBA3_MOUSE Amyloid beta A4 precursor protein-binding family A member 3 OS=Mus
musculus GN=Apba3 PE=1 SV=1
Length = 571
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K GE LGV +VESGWGS+LPT VIANL G A RCG L+IGD++ A+NG SLVG
Sbjct: 392 VCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSIGDRVTAINGTSLVG 451
Query: 72 LPLSTCQTYIK 82
L L+ CQ ++
Sbjct: 452 LSLAACQAAVR 462
>sp|O96018|APBA3_HUMAN Amyloid beta A4 precursor protein-binding family A member 3 OS=Homo
sapiens GN=APBA3 PE=1 SV=1
Length = 575
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/71 (59%), Positives = 53/71 (74%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K +GE LGV +VESGWGS+LPT VIANL G A R G L+IGD++ A+NG SLVG
Sbjct: 395 VHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVG 454
Query: 72 LPLSTCQTYIK 82
LPL+ CQ ++
Sbjct: 455 LPLAACQAAVR 465
>sp|Q7KRY7|LAP4_DROME Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1
Length = 1851
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLNIGD 59
P+ SE VV+PK +G LG I+ +G+ P + I+++ P G A++CG+L +GD
Sbjct: 1234 PLISEEVVLPKNQGS-LGFSIIGGTDHSCVPFGTREPGIFISHIVPGGIASKCGKLRMGD 1292
Query: 60 QIIAVN 65
+I+ VN
Sbjct: 1293 RILKVN 1298
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 12 VVVPKAKGEILGVVIVESGWGSML-----PT---VVIANLAPAGAAARCGQLNIGDQIIA 63
V++ KA+GE LG+ I + G P+ V ++ + GAA R G+L +G +++
Sbjct: 1337 VLLSKAEGERLGMHI-KGGLNGQRGNPADPSDEGVFVSKINSVGAARRDGRLKVGMRLLE 1395
Query: 64 VNGVSLVG 71
VNG SL+G
Sbjct: 1396 VNGHSLLG 1403
>sp|A8E0R9|GRIP2_XENLA Glutamate receptor-interacting protein 2 OS=Xenopus laevis GN=grip2
PE=2 SV=2
Length = 1083
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
IV + K +G LG+ I SG ++NL P G AAR QLNIGD I +VNG++L
Sbjct: 58 IVELIKKEGSTLGLTI--SGGTDKDGKPRVSNLRPGGLAARSDQLNIGDYIKSVNGINLT 115
Query: 71 GL 72
L
Sbjct: 116 KL 117
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG +VI+ L G A R G ++IGD+I+A+N +SL G PLS
Sbjct: 671 KRYGGPLGITI--SGTEEPFDPIVISGLTKRGLAERTGAIHIGDRILAINNISLKGKPLS 728
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+V + K G LG+ + +G +VI + PA RCG L+ GD I++++G S
Sbjct: 258 LVEIAKTPGSTLGISL-STGTHRNKQVIVIDKVKPASVVDRCGALHPGDHILSIDGTS 314
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+V+ + P G A R G L +GD+++ V+G+SL
Sbjct: 186 LVVTYVRPGGPADREGTLKVGDRLLCVDGISL 217
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 39 VIANLAPAGAAARCGQLNIGDQIIAVNGV 67
+I + P A RCG L +GD+++++NG+
Sbjct: 498 LIRFIEPDSPAERCGLLQVGDRLLSINGI 526
>sp|Q9C0E4|GRIP2_HUMAN Glutamate receptor-interacting protein 2 OS=Homo sapiens GN=GRIP2
PE=1 SV=3
Length = 1043
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG +VI+ L G A R G +++GD+I+A+N VSL G PLS
Sbjct: 660 KRYGGPLGITI--SGTEEPFDPIVISGLTKRGLAERTGAIHVGDRILAINNVSLKGRPLS 717
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V + K +G LG+ I SG ++NL P G AAR LNIGD I +VNG+ L
Sbjct: 48 VVELIKKEGSTLGLTI--SGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSVNGIHLT 105
Query: 71 GL 72
L
Sbjct: 106 RL 107
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 86
+V+ + P G A R G L +GD++++V+G+ L G +T ++ H
Sbjct: 176 LVLTYVRPGGPADREGSLKVGDRLLSVDGIPLHGASHATALATLRQCSH 224
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
P+ EIV P G LG+ + + + + I + PA R G L+ GD I++++
Sbjct: 246 PLMVEIVKTP---GSALGISLTTTSLRNK-SVITIDRIKPASVVDRSGALHPGDHILSID 301
Query: 66 GVSL 69
G S+
Sbjct: 302 GTSM 305
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 43 LAPAGAAARCGQLNIGDQIIAVNGVS 68
+ P A RCG L +GD+++++NG++
Sbjct: 490 IEPDSPAERCGLLQVGDRVLSINGIA 515
>sp|Q9Y3R0|GRIP1_HUMAN Glutamate receptor-interacting protein 1 OS=Homo sapiens GN=GRIP1
PE=1 SV=3
Length = 1128
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG ++I++L G A R G ++IGD+I+A+N SL G PLS
Sbjct: 677 KRYGGPLGITI--SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLS 734
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
S +V + K +G LG+ + SG ++NL G AAR QL++GD I AVNG++
Sbjct: 51 STVVELMKKEGTTLGLTV--SGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGIN 108
Query: 69 L 69
L
Sbjct: 109 L 109
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 252 LVEVAKTPGASLGVALTTSMCCNK-QVIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
VVI + P G A R G + GD++++V+G+ L+G + + +K
Sbjct: 180 VVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 224
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 39 VIANLAPAGAAARCGQLNIGDQIIAVNGV 67
+I+ + A RCG L IGD+++A+NG+
Sbjct: 502 LISYIEADSPAERCGVLQIGDRVMAINGI 530
>sp|P97879|GRIP1_RAT Glutamate receptor-interacting protein 1 OS=Rattus norvegicus
GN=Grip1 PE=1 SV=1
Length = 1112
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG ++I++L G A R G ++IGD+I+A+N SL G PLS
Sbjct: 676 KRYGGPLGITI--SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLS 733
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
S +V + K +G LG+ + SG ++NL G AAR QL++GD I AVNG++
Sbjct: 51 STVVELMKKEGTTLGLTV--SGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGIN 108
Query: 69 L 69
L
Sbjct: 109 L 109
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 252 LVEVAKTPGASLGVALTTSVCCNK-QVIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
VVI + P G A R G + GD++++V+G+ L+G + + +K
Sbjct: 180 VVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 224
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 39 VIANLAPAGAAARCGQLNIGDQIIAVNGV 67
+I+ + A RCG L IGD+++A+NG+
Sbjct: 501 LISYIEADSPAERCGVLQIGDRVMAINGI 529
>sp|Q925T6|GRIP1_MOUSE Glutamate receptor-interacting protein 1 OS=Mus musculus GN=Grip1
PE=1 SV=1
Length = 1127
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG ++I++L G A R G ++IGD+I+A+N SL G PLS
Sbjct: 676 KRYGGPLGITI--SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLS 733
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
S +V + K +G LG+ + SG ++NL G AAR QL++GD I AVNG++
Sbjct: 51 STVVELMKKEGTTLGLTV--SGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGIN 108
Query: 69 L 69
L
Sbjct: 109 L 109
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+V V K G LGV + S + +VI + A A RCG L++GD I++++G S+
Sbjct: 252 LVEVAKTPGASLGVALTTSVCCNK-QVIVIDKIKSASIADRCGALHVGDHILSIDGTSM 309
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
VVI + P G A R G + GD++++V+G+ L+G + + +K
Sbjct: 180 VVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 224
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 39 VIANLAPAGAAARCGQLNIGDQIIAVNGV 67
+I+ + A RCG L IGD+++A+NG+
Sbjct: 501 LISYIEADSPAERCGVLQIGDRVMAINGI 529
>sp|Q9WTW1|GRIP2_RAT Glutamate receptor-interacting protein 2 OS=Rattus norvegicus
GN=Grip2 PE=1 SV=1
Length = 1043
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
K G LG+ I SG ++I+ L G A R G +++GD+I+A+N VSL G PLS
Sbjct: 662 KRYGGPLGITI--SGTEEPFDPIIISGLTKRGLAERTGAIHVGDRILAINSVSLKGRPLS 719
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V + K +G LG+ I SG ++NL P G AAR LN+GD I +VNG+ L
Sbjct: 53 MVELIKREGSTLGLTI--SGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIRLT 110
Query: 71 GL 72
L
Sbjct: 111 RL 112
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+V + K G LG+ + +G P + I + PA R G L+ GD I+A++G S
Sbjct: 253 VVEIAKTPGSALGISLT-TGSHRNKPAITIDRIKPASVVDRSGALHAGDHILAIDGTS 309
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 43 LAPAGAAARCGQLNIGDQIIAVNGVS 68
+ P A RCG L +GD+++A+NG++
Sbjct: 492 IEPDSPAERCGLLQVGDRVLAINGIA 517
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLST 76
+V+ + P G A R G L +GD++++++G+ L G +T
Sbjct: 181 LVLTYVRPGGPADREGSLKVGDRLLSIDGIPLHGASHAT 219
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLNIGD 59
P E + +P+A G LG+ IV +G P V I+ + P G AARCG L +GD
Sbjct: 985 PYPVEEICLPRAGGP-LGLSIVGGSDHSSHPFGVQDPGVFISKVLPRGLAARCG-LRVGD 1042
Query: 60 QIIAVNG 66
+I+AVNG
Sbjct: 1043 RILAVNG 1049
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 14 VPKAKGEILGVVIVESGWGSM----LPT---VVIANLAPAGAAARCGQLNIGDQIIAVNG 66
+ KA GE LG+ I G PT + I+ ++P GAA R G+L +G +++ VN
Sbjct: 1089 IQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQ 1148
Query: 67 VSLVGL 72
SL+GL
Sbjct: 1149 QSLLGL 1154
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ I+ +A GAA R G L +GD+++++NGV +
Sbjct: 878 IFISRIAEGGAAHRAGTLQVGDRVLSINGVDM 909
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ I+ ++ G AAR G + +GD+++ VNGV+L
Sbjct: 744 IFISRVSEEGPAARAG-VRVGDKLLEVNGVAL 774
>sp|A7UA95|RADIL_DANRE Ras-associating and dilute domain-containing protein OS=Danio rerio
GN=radil PE=2 SV=1
Length = 1124
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 3 HLNPVTSEIV---VVPKAKGEI-LGVVIVESGWGSML--PTVVIANLAPAGAAARCGQLN 56
HL P + +I VV KG LG+ +++ G + L P + I L P G AA G+L
Sbjct: 1014 HLGPKSDDICSVFVVDLDKGPYGLGMGLID-GLHTPLNSPGIYIRTLIPDGPAAADGRLC 1072
Query: 57 IGDQIIAVNGVSLVG 71
IGD+I+AVNG SL+G
Sbjct: 1073 IGDRILAVNGTSLIG 1087
>sp|Q9WVQ1|MAGI2_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Mus musculus GN=Magi2 PE=1 SV=2
Length = 1275
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 VVVPKAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
VV+ + + E G VI+ ESG +P I + A RC +L +GD+I+AVN
Sbjct: 920 VVIHRKENEGFGFVIISSLNRPESGATITVPHK-IGRIIDGSPADRCAKLKVGDRILAVN 978
Query: 66 GVSLVGLPLSTCQTYIK 82
G S++ +P + IK
Sbjct: 979 GQSIINMPHADIVKLIK 995
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 40 IANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+ LA G A R G++ +GDQII +NG S
Sbjct: 1165 VLRLAEDGPAIRNGRMRVGDQIIEINGES 1193
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 27 VESGWGSML-------PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 79
+ESG+G + ++I + G+A R G+L+ GD+++ V+G+ + G T +
Sbjct: 783 MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAG---KTHRY 839
Query: 80 YIKVNHH 86
I + HH
Sbjct: 840 VIDLMHH 846
>sp|Q86UL8|MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Homo sapiens GN=MAGI2 PE=1 SV=3
Length = 1455
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 VVVPKAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
VV+ + + E G VI+ ESG +P I + A RC +L +GD+I+AVN
Sbjct: 921 VVIHRKENEGFGFVIISSLNRPESGSTITVPHK-IGRIIDGSPADRCAKLKVGDRILAVN 979
Query: 66 GVSLVGLPLSTCQTYIK 82
G S++ +P + IK
Sbjct: 980 GQSIINMPHADIVKLIK 996
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 40 IANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+ LA G A R G++ +GDQII +NG S
Sbjct: 1173 VLRLAEDGPAIRNGRMRVGDQIIEINGES 1201
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 27 VESGWGSML-------PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 79
+ESG+G + ++I + G+A R G+L+ GD+++ V+G+ + G T +
Sbjct: 784 MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAG---KTHRY 840
Query: 80 YIKVNHH 86
I + HH
Sbjct: 841 VIDLMHH 847
>sp|O88382|MAGI2_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 2 OS=Rattus norvegicus GN=Magi2 PE=1 SV=1
Length = 1277
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 VVVPKAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
V++ + + E G VI+ ESG +P I + A RC +L +GD+I+AVN
Sbjct: 921 VIIHRKENEGFGFVIISSLNRPESGATITVPHK-IGRIIDGSPADRCAKLKVGDRILAVN 979
Query: 66 GVSLVGLPLSTCQTYIK 82
G S++ +P + IK
Sbjct: 980 GQSIINMPHADIVKLIK 996
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 40 IANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+ LA G A R G++ +GDQII +NG S
Sbjct: 1167 VLRLAEDGPAIRNGRMRVGDQIIEINGES 1195
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 27 VESGWGSML-------PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQT 79
+ESG+G + ++I + G+A R G+L+ GD+++ V+G+ + G T +
Sbjct: 784 MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAG---KTHRY 840
Query: 80 YIKVNHH 86
I + HH
Sbjct: 841 VIDLMHH 847
>sp|Q8JHF4|MPP5A_DANRE MAGUK p55 subfamily member 5-A OS=Danio rerio GN=mpp5a PE=1 SV=2
Length = 677
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
T +IV + KAK LG + + +VVI+ + GAA R G L+ GD+I+ +NGV
Sbjct: 255 TVKIVRIEKAKDIPLGATVRND-----MDSVVISRIVKGGAAERSGLLHEGDEILEINGV 309
Query: 68 SLVG 71
+ G
Sbjct: 310 EIRG 313
>sp|Q8NI35|INADL_HUMAN InaD-like protein OS=Homo sapiens GN=INADL PE=1 SV=3
Length = 1801
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 2 LHLNPVTSEIV-----VVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL 55
L ++P T IV ++ +KG LG+ IV G + L +VI + GAAAR G+L
Sbjct: 1421 LSVDPATCPIVPGQEMIIEISKGRSGLGLSIV-GGKDTPLNAIVIHEVYEEGAAARDGRL 1479
Query: 56 NIGDQIIAVNGVSL 69
GDQI+ VNGV L
Sbjct: 1480 WAGDQILEVNGVDL 1493
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 4 LNPVTSEIVVVPKAKGEILGVVIVESGWGSMLPT--VVIANLAPAGAAARCGQLNIGDQI 61
+ P T EI + + LG+ I G GS L V IA + +G AAR +L +GD+I
Sbjct: 1672 MEPRTVEI---NRELSDALGISIA-GGRGSPLGDIPVFIAMIQASGVAARTQKLKVGDRI 1727
Query: 62 IAVNGVSLVGL 72
+++NG L GL
Sbjct: 1728 VSINGQPLDGL 1738
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K G LG+ IV GS V I+++ GAA G+L GDQI++VNG +
Sbjct: 1534 VDLQKKAGRGLGLSIVGKRNGS---GVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRN 1590
Query: 72 LPLSTCQTYIK 82
T T +K
Sbjct: 1591 ASQETVATILK 1601
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
E+ ++ G G+V G VV+ + P G A R G+L GD I+ + G ++
Sbjct: 248 EVELINDGSGLGFGIV------GGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNV 301
Query: 70 VGL 72
G+
Sbjct: 302 QGM 304
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 16 KAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ G+ LG+ IV +G S + + ++ P AA G + + D+I+AV+GV++
Sbjct: 370 RKDGQSLGIRIVGYVGTSHTGEAS---GIYVKSIIPGSAAYHNGHIQVNDKIVAVDGVNI 426
Query: 70 VGL 72
G
Sbjct: 427 QGF 429
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 37 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
++ + + P G AA G++ IGD+++ +N L G IK
Sbjct: 1263 SIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK 1308
>sp|Q63ZW7|INADL_MOUSE InaD-like protein OS=Mus musculus GN=Inadl PE=1 SV=2
Length = 1834
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 2 LHLNPVTSEIV-----VVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQL 55
L ++P T IV ++ +KG LG+ IV G + L +VI + GAAAR G+L
Sbjct: 1456 LSVDPATCPIVPGQEMIIEISKGRSGLGLSIV-GGKDTPLDAIVIHEVYEEGAAARDGRL 1514
Query: 56 NIGDQIIAVNGVSL 69
GDQI+ VNGV L
Sbjct: 1515 WAGDQILEVNGVDL 1528
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNIGDQIIA 63
P T EI+ + + LG+ I G GS L + IA + G AAR +L +GD+I++
Sbjct: 1707 PRTVEII---RELSDALGISIA-GGKGSPLGDIPIFIAMIQANGVAARTQKLKVGDRIVS 1762
Query: 64 VNGVSLVGL 72
+NG L GL
Sbjct: 1763 INGQPLDGL 1771
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 5 NPVTSEIVVVPKAKGEILGVVIVESGW-GSMLPT----VVIANLAPAGAAARCGQLNIGD 59
+P + V + K G+ LG+ IV G+ G+ P + + ++ P AA GQ+ + D
Sbjct: 359 SPFETYSVELVKKDGQSLGIRIV--GYVGTAHPGEASGIYVKSIIPGSAAYHNGQIQVND 416
Query: 60 QIIAVNGVSLVGL 72
+I+AV+GV++ G
Sbjct: 417 KIVAVDGVNIQGF 429
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
T E+ ++ G G+V G VV+ + P G A R G+L GD I+ + G
Sbjct: 246 TEEVELINDGSGLGFGIV------GGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGT 299
Query: 68 SLVGL 72
++ G+
Sbjct: 300 NVQGM 304
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V + K G LG+ IV GS V I+++ GAA G+L GDQI++VNG +
Sbjct: 1568 LVDLQKKTGRGLGLSIVGKRSGS---GVFISDIVKGGAADLDGRLIRGDQILSVNGEDMR 1624
Query: 71 GLPLSTCQTYIK 82
T T +K
Sbjct: 1625 HASQETVATILK 1636
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 5 NPVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAV 64
+P + +V KG ++ + +VI +L G A R G+L GD++++V
Sbjct: 683 SPEVKTVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGELLPGDRLVSV 742
Query: 65 NGVSL 69
N SL
Sbjct: 743 NEFSL 747
>sp|O75970|MPDZ_HUMAN Multiple PDZ domain protein OS=Homo sapiens GN=MPDZ PE=1 SV=2
Length = 2070
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 14 VPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLP 73
+PK +G LG+ I E L V+I +L G AA G+L +GDQI+AV+ +VG P
Sbjct: 1486 LPKDQGG-LGIAISEE---DTLSGVIIKSLTEHGVAATDGRLKVGDQILAVDDEIVVGYP 1541
Query: 74 LSTCQTYIKV 83
+ + +K
Sbjct: 1542 IEKFISLLKT 1551
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 22 LGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGL 72
LG IV G+GS LP + + + GAA+ G+L GDQIIAVNG SL G+
Sbjct: 1997 LGFSIV-GGYGSPHGDLP-IYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGV 2048
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 22 LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
LG+ IV G ++L ++I + GAA + G+L GDQI+ VNG+ L
Sbjct: 1639 LGLSIV-GGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 1685
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 37 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
+V I + P GAA + G+L I D+++ +NG L G + IK
Sbjct: 1374 SVFIVGIDPNGAAGKDGRLQIADELLEINGQILYGRSHQNASSIIK 1419
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 86
+ + ++ + A G++ IGDQIIAV+G +L G T Q ++V H
Sbjct: 405 IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGF---TNQQAVEVLRH 450
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 5 NPVTSEI-----VVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNI 57
N + SEI V + K + LG+ I G GS L V IA + P G AA+ +L +
Sbjct: 1851 NALASEIQGLRTVEMKKGPTDSLGISIA-GGVGSPLGDVPIFIAMMHPTGVAAQTQKLRV 1909
Query: 58 GDQIIAVNGVSLVGL 72
GD+I+ + G S G+
Sbjct: 1910 GDRIVTICGTSTEGM 1924
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 29 SGWGSMLPTVV----IANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
SG G L V I ++ P G G+L GD+++ VNG++L+G
Sbjct: 563 SGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVNGITLLG 609
>sp|Q8BH60|GOPC_MOUSE Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Mus musculus GN=Gopc PE=1 SV=1
Length = 463
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
V++ K E LG+ I G +P ++I+ + P A RCG L++GD I+AVNGV+L
Sbjct: 290 VLLLKEDHEGLGISIT-GGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVNGVNL 345
>sp|Q9HD26|GOPC_HUMAN Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Homo sapiens GN=GOPC PE=1 SV=1
Length = 462
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
V++ K E LG+ I G +P ++I+ + P A RCG L++GD I+AVNGV+L
Sbjct: 289 VLLLKEDHEGLGISIT-GGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVNGVNL 344
>sp|O55164|MPDZ_RAT Multiple PDZ domain protein OS=Rattus norvegicus GN=Mpdz PE=1 SV=1
Length = 2054
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 3 HLNPVTSEIVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGD 59
L P S+ + + + + LG IV G+GS LP + + + GAAA G+L GD
Sbjct: 1963 DLGPPQSKTITLDRGP-DGLGFSIV-GGYGSPHGDLP-IYVKTVFAKGAAAEDGRLKRGD 2019
Query: 60 QIIAVNGVSLVGL 72
QIIAVNG SL G+
Sbjct: 2020 QIIAVNGQSLEGV 2032
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 14 VPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLP 73
+PK +G LG+ I E L V I +L G AA+ G+L GD+I+AV+ + G P
Sbjct: 1473 LPKDQGG-LGIAICEE---DTLNGVTIKSLTERGGAAKDGRLKPGDRILAVDDELVAGCP 1528
Query: 74 -------LSTCQTYIKV 83
L T +T +K+
Sbjct: 1529 IEKFISLLKTAKTTVKL 1545
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 37 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
+V I + P GAA R G+L I D+++ +NG L G + IK
Sbjct: 1361 SVFIVGIDPTGAAGRDGRLQIADELLEINGQILYGRSHQNASSIIK 1406
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 17 AKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+KG+ LG+ IV G ++L ++I + GAA + G+L GDQI+ VNG+ L
Sbjct: 1617 SKGQTGLGLSIV-GGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 1669
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 5 NPVTSEI-----VVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNI 57
N + SEI V + K + LG+ I G GS L V IA + P G AA+ +L +
Sbjct: 1835 NALASEIQGLRTVEIKKGPADALGLSIA-GGVGSPLGDVPIFIAMMHPNGVAAQTQKLRV 1893
Query: 58 GDQIIAVNGVSLVGL 72
GD+I+ + G S G+
Sbjct: 1894 GDRIVTICGTSTDGM 1908
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 86
+ + ++ + A G++ IGDQI+AV+G +L G T Q ++V H
Sbjct: 405 IFVKSITKSSAVELDGRIQIGDQIVAVDGTNLQGF---TNQQAVEVLRH 450
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 29 SGWGSMLPTVV----IANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
SG G L V I ++ P G G+L GD+++ VNG++L+G
Sbjct: 555 SGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVNGINLLG 601
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+VI +L P G A + G+L GD+++ VN ++L
Sbjct: 720 IVIRSLVPGGIAEKDGRLFPGDRLMFVNDINL 751
>sp|Q8VBX6|MPDZ_MOUSE Multiple PDZ domain protein OS=Mus musculus GN=Mpdz PE=1 SV=2
Length = 2055
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 3 HLNPVTSEIVVVPKAKGEILGVVIVESGWGS---MLPTVVIANLAPAGAAARCGQLNIGD 59
L P S+ + + + + LG IV G+GS LP V A GAAA G+L GD
Sbjct: 1964 DLGPPQSKTITLDRGP-DGLGFSIV-GGYGSPHGDLPIYVKTVFA-KGAAAEDGRLKRGD 2020
Query: 60 QIIAVNGVSLVGL 72
QIIAVNG SL G+
Sbjct: 2021 QIIAVNGQSLEGV 2033
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 37 TVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
+V I + P GAA R G+L I D+++ +NG L G + IK
Sbjct: 1362 SVFIVGIDPTGAAGRDGRLQIADELLEINGQILYGRSHQNASSIIK 1407
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 17 AKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+KG+ LG+ IV G ++L ++I + GAA + G+L GDQI+ VNG+ L
Sbjct: 1618 SKGQTGLGLSIV-GGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDL 1670
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHH 86
+ + ++ + A G++ IGDQIIAV+G +L G T Q ++V H
Sbjct: 406 IFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGF---TNQQAVEVLRH 451
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 14 VPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLP 73
+PK +G LG+ I E + V+I +L G AA+ G+L GD I+AV+ + G P
Sbjct: 1474 LPKDQGG-LGIAICEE---DTINGVMIESLTEHGGAAKDGRLKPGDHILAVDDEVVAGCP 1529
Query: 74 LSTCQTYIKV 83
+ + +K
Sbjct: 1530 VEKFISLLKT 1539
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 5 NPVTSEI-----VVVPKAKGEILGVVIVESGWGSMLPTV--VIANLAPAGAAARCGQLNI 57
N + SEI V + K + LG+ I G GS L V IA + P G AA+ +L +
Sbjct: 1836 NALASEIQGLRTVEIKKGPADSLGLSIA-GGVGSPLGDVPIFIAMMHPNGVAAQTQKLRV 1894
Query: 58 GDQIIAVNGVSLVGL 72
GD+I+ + G S G+
Sbjct: 1895 GDRIVTICGTSTDGM 1909
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+VI +L P G A + G+L GD+++ VN ++L
Sbjct: 721 IVIRSLVPGGIAEKDGRLFPGDRLMFVNDINL 752
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 29 SGWGSMLPTVV----IANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
SG G L V I ++ P G G+L GD+++ VNG++L+G
Sbjct: 556 SGLGISLEATVGHHFIRSVLPEGPVGHSGKLFSGDELLEVNGINLLG 602
>sp|Q9P202|WHRN_HUMAN Whirlin OS=Homo sapiens GN=DFNB31 PE=1 SV=3
Length = 907
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
TS +V V K+ LG+ I E G + P I + G+A CGQL +G I+ VNG+
Sbjct: 813 TSTLVRVKKSAA-TLGIAI-EGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGL 870
Query: 68 SLVG 71
+L G
Sbjct: 871 TLRG 874
>sp|Q8TEW0|PARD3_HUMAN Partitioning defective 3 homolog OS=Homo sapiens GN=PARD3 PE=1 SV=2
Length = 1356
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
+ + N+ P GAA + G+L GD++I VNGV LVG
Sbjct: 488 IYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVG 521
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
+ + ++ GAA++ G+L + DQ+IAVNG SL+G
Sbjct: 619 IFVKSIINGGAASKDGRLRVNDQLIAVNGESLLG 652
>sp|Q8TDM6|DLG5_HUMAN Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4
Length = 1919
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
V A + P AA+ G L +GD+I+A+NG++L L+ C++ ++
Sbjct: 738 VYAAAVLPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECESLLR 782
>sp|Q9JK71|MAGI3_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Rattus norvegicus GN=Magi3 PE=1 SV=2
Length = 1470
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVV---IANLAPAGAAARCGQLNIGDQII 62
P S V++ + + E G VI+ S P V+ I + A RCG+L +GD I
Sbjct: 847 PQESYDVILQRKENEGFGFVILTSK-SKPPPGVIPHKIGRVIDGSPADRCGRLKVGDHIS 905
Query: 63 AVNGVSLVGL 72
AVNG S+V L
Sbjct: 906 AVNGQSIVDL 915
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 3 HL-NPVTSEIVVVPKAKGEILGVVIVE-----SGWGSMLPT-------VVIANLAPAGAA 49
HL P T+ I VV + LG VE G+G L + I LA G A
Sbjct: 998 HLAQPDTAVISVVGSRHSQSLGCYPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPA 1057
Query: 50 ARCGQLNIGDQIIAVNGVSLVGL 72
+ G++++GDQI+ +NG G+
Sbjct: 1058 IKDGRIHVGDQIVEINGEPTQGI 1080
>sp|Q5RD32|GOPC_PONAB Golgi-associated PDZ and coiled-coil motif-containing protein
OS=Pongo abelii GN=GOPC PE=2 SV=1
Length = 462
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
V++ K E LG+ I G +P ++I+ + P A RCG L++GD I+AV+GV+L
Sbjct: 289 VLLLKEDHEGLGISIT-GGKEHGVP-ILISEIHPGQPADRCGGLHVGDAILAVDGVNL 344
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESG------WGSMLPTVVIANLAPAGAAARCGQLNIGD 59
P E + +P+A G LG+ IV +G P V I+ + P G AAR G L +GD
Sbjct: 999 PYPVEEIRLPRAGGP-LGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSG-LRVGD 1056
Query: 60 QIIAVNG 66
+I+AVNG
Sbjct: 1057 RILAVNG 1063
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 14 VPKAKGEILGVVIVESGWGSM----LPT---VVIANLAPAGAAARCGQLNIGDQIIAVNG 66
+ KA GE LG+ I G PT + I+ ++P GAA R G+L +G +++ VN
Sbjct: 1103 IQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQ 1162
Query: 67 VSLVGL 72
SL+GL
Sbjct: 1163 QSLLGL 1168
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ ++ +A GAA R G L +GD+++++NGV +
Sbjct: 892 IFVSRIAEGGAAHRAGTLQVGDRVLSINGVDV 923
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
+ I+ ++ G AAR G + +GD+++ VNGV+L G
Sbjct: 758 IFISRVSEEGPAARAG-VRVGDKLLEVNGVALQG 790
>sp|Q96JH8|RADIL_HUMAN Ras-associating and dilute domain-containing protein OS=Homo sapiens
GN=RADIL PE=1 SV=5
Length = 1075
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 36 PTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGL 72
P + I L P AA G+L++GD+I+ VNG SL+GL
Sbjct: 1001 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGL 1037
>sp|Q80VW5|WHRN_MOUSE Whirlin OS=Mus musculus GN=Dfnb31 PE=1 SV=3
Length = 918
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
TS +V V K+ LG+ I E G + P I + G+A CGQL +G I+ VNG
Sbjct: 824 TSTLVRVRKSAA-TLGIAI-EGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGQ 881
Query: 68 SLVG 71
+L G
Sbjct: 882 TLRG 885
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 19 GEILGVVI---VESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
G LG+ I E G G + I + P G+ A L +GDQI+ VNG S + +
Sbjct: 288 GRSLGLTIRGGAEYGLG-----IYITGVDP-GSEAESSGLKVGDQILEVNGRSFLNILHD 341
Query: 76 TCQTYIKVNHHL 87
+K + HL
Sbjct: 342 EAVKLLKSSRHL 353
>sp|Q5F425|LIN7C_CHICK Protein lin-7 homolog C OS=Gallus gallus GN=LIN7C PE=1 SV=1
Length = 197
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Homo sapiens GN=MAGI3 PE=1 SV=2
Length = 1506
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVV---IANLAPAGAAARCGQLNIGDQIIAVNGVS 68
VV+ + + E G VI+ S P V+ I + A RCG+L +GD I AVNG S
Sbjct: 877 VVLQRKENEGFGFVILTSK-NKPPPGVIPHKIGRVIEGSPADRCGKLKVGDHISAVNGQS 935
Query: 69 LVGL 72
+V L
Sbjct: 936 IVEL 939
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 3 HL-NPVTSEIVVVPKAKGEILGVVIVE-----SGWGSMLPT-------VVIANLAPAGAA 49
HL P T+ I VV + LG VE G+G L + I LA G A
Sbjct: 1022 HLAQPDTAVISVVGSRHNQNLGCYPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPA 1081
Query: 50 ARCGQLNIGDQIIAVNGVSLVGL 72
+ G++++GDQI+ +NG G+
Sbjct: 1082 IKDGRIHVGDQIVEINGEPTQGI 1104
>sp|Q792I0|LIN7C_RAT Protein lin-7 homolog C OS=Rattus norvegicus GN=Lin7c PE=1 SV=1
Length = 197
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|Q5RAA5|LIN7C_PONAB Protein lin-7 homolog C OS=Pongo abelii GN=LIN7C PE=2 SV=1
Length = 197
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|O88952|LIN7C_MOUSE Protein lin-7 homolog C OS=Mus musculus GN=Lin7c PE=1 SV=2
Length = 197
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|Q9NUP9|LIN7C_HUMAN Protein lin-7 homolog C OS=Homo sapiens GN=LIN7C PE=1 SV=1
Length = 197
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|Q0P5F3|LIN7C_BOVIN Protein lin-7 homolog C OS=Bos taurus GN=LIN7C PE=2 SV=1
Length = 197
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V +PK + E LG I+ G + I+ + P G A R G L GDQ+++VNGVS+
Sbjct: 93 VVELPKTE-EGLGFNIM--GGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVE 149
Query: 71 G 71
G
Sbjct: 150 G 150
>sp|Q810W9|WHRN_RAT Whirlin OS=Rattus norvegicus GN=Dfnb31 PE=1 SV=1
Length = 920
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
TS ++ V K+ LG+ I E G + P I + G+A CGQL +G I+ VNG
Sbjct: 826 TSTLIRVRKSAA-TLGIAI-EGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGQ 883
Query: 68 SLVG 71
+L G
Sbjct: 884 TLRG 887
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 19 GEILGVVI---VESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLS 75
G LG+ I E G G + I + P G+ A L +GDQI+ VNG S + +
Sbjct: 286 GRSLGLTIRGGAEYGLG-----IYITGVDP-GSEAESSGLKVGDQILEVNGRSFLSILHD 339
Query: 76 TCQTYIKVNHHL 87
+K + HL
Sbjct: 340 EAVKLLKSSRHL 351
>sp|Q9Z252|LIN7B_RAT Protein lin-7 homolog B OS=Rattus norvegicus GN=Lin7b PE=1 SV=1
Length = 207
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 3 HLNPVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQII 62
H +P +V +PK E LG I+ G + I+ + P G A R G L GDQ++
Sbjct: 88 HAHP---RVVELPKTD-EGLGFNIM--GGKEQNSPIYISRVIPGGVADRHGGLKRGDQLL 141
Query: 63 AVNGVSLVG 71
+VNGVS+ G
Sbjct: 142 SVNGVSVEG 150
>sp|O88951|LIN7B_MOUSE Protein lin-7 homolog B OS=Mus musculus GN=Lin7b PE=1 SV=2
Length = 207
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 3 HLNPVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQII 62
H +P +V +PK E LG I+ G + I+ + P G A R G L GDQ++
Sbjct: 88 HAHP---RVVELPKTD-EGLGFNIM--GGKEQNSPIYISRVIPGGVADRHGGLKRGDQLL 141
Query: 63 AVNGVSLVG 71
+VNGVS+ G
Sbjct: 142 SVNGVSVEG 150
>sp|Q9QZQ1|AFAD_MOUSE Afadin OS=Mus musculus GN=Mllt4 PE=1 SV=3
Length = 1820
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 10 EIVVVPKAKGEILGVVIVES-GWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
EI+ V K +G+ IV + G G + + ++ GAA G+L GDQ+++V+G S
Sbjct: 1006 EIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRS 1065
Query: 69 LVGL 72
LVGL
Sbjct: 1066 LVGL 1069
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,787,521
Number of Sequences: 539616
Number of extensions: 1072557
Number of successful extensions: 3197
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2807
Number of HSP's gapped (non-prelim): 417
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)