RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3490
(88 letters)
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 69.1 bits (169), Expect = 6e-18
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K KGEILGVVIVESGWGS+LPTV+IAN+ G A + G+LNIGDQI+++NG SLVG
Sbjct: 2 VFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVG 61
Query: 72 LPLSTCQTYIK 82
LPLSTCQ+ IK
Sbjct: 62 LPLSTCQSIIK 72
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 54.9 bits (132), Expect = 3e-12
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
V+ K LG+ I+ + P V I + P G + G+L GDQ++++N S
Sbjct: 7 PAFRVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKES 66
Query: 69 LVGLPLSTCQTYIK 82
++G+ ++ I
Sbjct: 67 MIGVSFEEAKSIIT 80
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 53.9 bits (129), Expect = 1e-11
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
++ ++ K L + + G S + VV++ + GAA R G + GD+I+A+NG +
Sbjct: 18 DVRLLRIKKEGSLDLALE-GGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIV 76
Query: 70 VGLPLSTCQTYIK 82
L+ + ++
Sbjct: 77 TDYTLAEAEAALQ 89
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 52.2 bits (125), Expect = 3e-11
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V +PK LG+ I +VI+++ A R G L +GD+++A++ + L
Sbjct: 14 VKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDS 73
Query: 72 LPLSTCQTYIK 82
+ ++
Sbjct: 74 CSMEDAVQILQ 84
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 52.2 bits (125), Expect = 3e-11
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
S +V K LG+ I G + P I + G+A CGQL +G I+ VNG++
Sbjct: 6 SGTLVRVKKSAATLGIAIE-GGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLT 64
Query: 69 LVGLPLSTCQTYIK 82
L G I
Sbjct: 65 LRGKEHREAARIIA 78
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 50.7 bits (121), Expect = 2e-10
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ ++ K +G LG + G + + + P G A++ G + G++++++NG SL
Sbjct: 10 HVTILHKEEGAGLGFSLA-GGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSL 68
Query: 70 VGLPLSTCQTYIK 82
G ++
Sbjct: 69 KGTTHHDALAILR 81
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 50.7 bits (121), Expect = 2e-10
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 16 KAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGL 72
G LG+ IV E S IA + P G+A + G+L G Q++ NG+ L
Sbjct: 26 TVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSK 85
Query: 73 PLSTCQTYIK 82
Q+ I
Sbjct: 86 TYEEVQSIIS 95
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 50.3 bits (120), Expect = 2e-10
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 10 EIVVVPKAKGEILGVVIV----ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
+V + K + G+ IV + + + I + P A CG+L +GD+I+++N
Sbjct: 5 HMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLN 64
Query: 66 GVSLVGLPLSTCQTYIK 82
G + IK
Sbjct: 65 GKDVRNSTEQAVIDLIK 81
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 49.4 bits (118), Expect = 4e-10
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V K E +G+ + + ++A + G R G L++GD+I +NG+S+
Sbjct: 4 LVQFQKNTDEPMGITLKMNELNH----CIVARIMHGGMIHRQGTLHVGDEIREINGISVA 59
Query: 71 GLPLSTCQTYIK 82
+ Q ++
Sbjct: 60 NQTVEQLQKMLR 71
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane
exocytosis protein 1, RIMS1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 108
Score = 49.6 bits (118), Expect = 6e-10
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 12 VVVPKAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+PK G +LG+ +V + G + I + A G L GD+++ NG
Sbjct: 22 TTMPKDSGALLGLKVVGGKMTDLGRL--GAFITKVKKGSLADVVGHLRAGDEVLEWNGKP 79
Query: 69 LVGLPLSTCQTYIK 82
L G I
Sbjct: 80 LPGATNEEVYNIIL 93
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 49.1 bits (117), Expect = 6e-10
Identities = 14/82 (17%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 4 LNPVTSEIVVVPKAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQ 60
+ + VV+ G+ + + P ++ + P A RCG L +GD+
Sbjct: 4 IVHTETTEVVLCGDPLSGFGLQLQGGIFATETLSSP-PLVCFIEPDSPAERCGLLQVGDR 62
Query: 61 IIAVNGVSLVGLPLSTCQTYIK 82
++++NG++ + ++
Sbjct: 63 VLSINGIATEDGTMEEANQLLR 84
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 47.6 bits (113), Expect = 2e-09
Identities = 15/71 (21%), Positives = 29/71 (40%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K LG+ IV + I ++ GA A G++ GD ++ VN ++
Sbjct: 5 VTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFEN 64
Query: 72 LPLSTCQTYIK 82
+ ++
Sbjct: 65 MSNDDAVRVLR 75
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 47.6 bits (113), Expect = 2e-09
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 10 EIVVVPKAKGEILGVVIV-ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
EI+ V K +G+ IV G G + + ++ GAA G+L GDQ+++V+G S
Sbjct: 4 EIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRS 63
Query: 69 LVGLPLSTCQTYIK 82
LVGL +
Sbjct: 64 LVGLSQERAAELMT 77
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 47.6 bits (113), Expect = 2e-09
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 12 VVVPKAKGEILGVVIV-------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAV 64
V + + + LG+ IV G ++ + I ++ A + G L GD+I+ V
Sbjct: 5 VELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEV 64
Query: 65 NGVSLVGLPLSTCQTYIK 82
+G+ L I+
Sbjct: 65 DGMDLRDASHEQAVEAIR 82
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 48.1 bits (114), Expect = 2e-09
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 9 SEIVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
++++ G + LG+V++++G P + I++L GAAA G L GD +I+V
Sbjct: 26 NKVIQTKLTVGNLGLGLVVIQNG-----PYLQISHLINKGAAASDGILQPGDVLISVGHA 80
Query: 68 SLVGLPLSTCQTYIK 82
+++G L ++
Sbjct: 81 NVLGYTLREFLKLLQ 95
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein, PAR3-L
(RIKEN cDNA 2810455b10) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 127
Score = 47.8 bits (113), Expect = 3e-09
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 12 VVVPKAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+ + + LGV + G+ L + I ++ GAA + G+L + DQ+IAVNG +
Sbjct: 29 IPLNDSGSAGLGVSLKGNKSRETGTDLG-IFIKSIIHGGAAFKDGRLRMNDQLIAVNGET 87
Query: 69 LVGLPLSTCQTYIK 82
L+G ++
Sbjct: 88 LLGKSNHEAMETLR 101
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 46.8 bits (111), Expect = 4e-09
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 18 KGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTC 77
G LG+ I SG ++I++L G A R G ++IGD+I+A+N SL G PLS
Sbjct: 12 YGGPLGITI--SGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEA 69
Query: 78 QTYIK 82
++
Sbjct: 70 IHLLQ 74
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 46.8 bits (111), Expect = 4e-09
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V V KA LG+ I G + +P ++I+ + AA + L +GD I++VNG L
Sbjct: 8 VTVRKADAGGLGISIK-GGRENKMP-ILISKIFKGLAADQTEALFVGDAILSVNGEDLSS 65
Query: 72 LPLSTCQTYIK 82
+K
Sbjct: 66 ATHDEAVQALK 76
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 100
Score = 46.1 bits (109), Expect = 8e-09
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 3 HLNPVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQII 62
H T +IV + KA+ LG + +V+I+ + GAA + G L+ GD+++
Sbjct: 13 HYGGETVKIVRIEKARDIPLGATVRNEM-----DSVIISRIVKGGAAEKSGLLHEGDEVL 67
Query: 63 AVNGVSLVGLPLSTCQTYIK 82
+NG+ + G ++ +
Sbjct: 68 EINGIEIRGKDVNEVFDLLS 87
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 46.1 bits (109), Expect = 1e-08
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
E+ + + LG+ + + I+ + P AA+ G++ GD+II +NG+ +
Sbjct: 22 EVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEV 81
Query: 70 VGLP 73
Sbjct: 82 QNRE 85
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 46.2 bits (109), Expect = 1e-08
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+V + K G LG+ + + + + I + PA R G L+ GD I++++G S+
Sbjct: 18 MVEIVKTPGSALGISLTTTSLRNKSV-ITIDRIKPASVVDRSGALHPGDHILSIDGTSME 76
Query: 71 GLPLSTCQTYIK 82
L +
Sbjct: 77 HCSLLEATKLLA 88
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 44.9 bits (106), Expect = 3e-08
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
E+ V + G I+ G ++I + G+A R G+L+ GD+++ V+G+ +
Sbjct: 10 ELDVHLRRMESGFGFRIL--GGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPV 67
Query: 70 VGLPLSTCQTYIK 82
G +
Sbjct: 68 AGKTHRYVIDLMH 80
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 44.5 bits (105), Expect = 3e-08
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 10 EIVVVPKAKGEI-LGVVIVESGWGSMLPT----VVIANLAPAGAAARCGQLNIGDQIIAV 64
E+ V K E LG+ I+ G G+ + + + GAA R G++ + DQI+ V
Sbjct: 2 ELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEV 61
Query: 65 NGVSLVGLPLSTCQTYIK 82
+G+SLVG+ + T ++
Sbjct: 62 DGISLVGVTQNFAATVLR 79
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 44.9 bits (106), Expect = 4e-08
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 15 PKAKGEILGVVIV--ESGWGSML-------PTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
+ KG L + G+G + + + ++ P G AA+ G++ GD I+ +N
Sbjct: 14 SQLKGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYIN 73
Query: 66 GVSLVGLPLSTCQTYIK 82
V ++G + +
Sbjct: 74 EVCVLGHTHADVVKLFQ 90
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 43.7 bits (103), Expect = 7e-08
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 10 EIVVVPKAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNG 66
EI + G LG I ++ P++ I + P GAAA+ G+L + D I+ VN
Sbjct: 4 EITLERGNSG--LGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNE 61
Query: 67 VSLVGLPLSTCQTYIK 82
V + + S +K
Sbjct: 62 VDVREVTHSAAVEALK 77
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 43.8 bits (103), Expect = 1e-07
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 12 VVVPKAKGEILGVVIV-------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAV 64
+ + KA GE LG+ I + + I+ ++P GAA R G+L +G +++ V
Sbjct: 13 LCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEV 72
Query: 65 NGVSLVGLPLSTCQTYIK 82
N SL+GL ++
Sbjct: 73 NQQSLLGLTHGEAVQLLR 90
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 42.2 bits (99), Expect = 4e-07
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 8 TSEIVVVPKAKGEI-LGVVIVE-SGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
+ + V +G LG+ +++ P + I L P AA G+L++GD+I+ VN
Sbjct: 6 SGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVN 65
Query: 66 GVSLVGLPLSTCQTYIK 82
G SL+GL I+
Sbjct: 66 GSSLLGLGYLRAVDLIR 82
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 41.5 bits (97), Expect = 7e-07
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 12 VVVPKAKGEILGVVIV--ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
VV+ G+ + ++ +I+ + A RCG L IGD+++A+NG+
Sbjct: 19 VVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPT 78
Query: 70 VGLPLSTCQTYIK 82
++
Sbjct: 79 EDSTFEEANQLLR 91
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 41.2 bits (96), Expect = 1e-06
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 12 VVVPKAKGEILGVVIV------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
VV+ + + E G VI+ ESG +P I + A RC +L +GD+I+AVN
Sbjct: 14 VVIHRKENEGFGFVIISSLNRPESGSTITVP-HKIGRIIDGSPADRCAKLKVGDRILAVN 72
Query: 66 GVSLVGLPLSTCQTYIK 82
G S++ +P + IK
Sbjct: 73 GQSIINMPHADIVKLIK 89
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 40.7 bits (95), Expect = 1e-06
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 10 EIVVVPKAKGEILGVVIV-------ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQII 62
+ ++ + LG I + P + I+ L P G A G L + D++I
Sbjct: 5 RVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVI 64
Query: 63 AVNGVSLVGLPLSTCQTYIK 82
VNG+ + G L +
Sbjct: 65 EVNGIEVAGKTLDQVTDMMV 84
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 40.4 bits (94), Expect = 2e-06
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + K K LG ++ E P V+I++L GAA + G + GD I+AVN LV
Sbjct: 5 VRLFKRKVGGLGFLVKE---RVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVD 61
Query: 72 LPLSTCQTYIK 82
L + ++
Sbjct: 62 LSYDSALEVLR 72
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 39.9 bits (93), Expect = 2e-06
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 12 VVVPKAKGEILGVVIV----ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
V + K G+ + + + ++VI+++ P G A G L D+++ VNG
Sbjct: 11 VTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRVVMVNGT 68
Query: 68 SLVGLPLSTCQTYIK 82
+ + S ++
Sbjct: 69 PMEDVLHSFAVQQLR 83
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 40.0 bits (93), Expect = 3e-06
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V + G LG+ I G L + I + P A G L +GDQI+ VNG S +
Sbjct: 24 VNLVLGDGRSLGLTIR-GGAEYGLG-IYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLN 80
Query: 72 LPLSTCQTYIKVNHHL 87
+ +K + HL
Sbjct: 81 ILHDEAVRLLKSSRHL 96
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 39.1 bits (91), Expect = 4e-06
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 10 EIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
++ + + E G + + G + V + N+ PAG G L D+++ VN V
Sbjct: 9 KVTLYKDSGMEDFGFSVAD---GLLEKGVYVKNIRPAGPGDL-GGLKPYDRLLQVNHVRT 64
Query: 70 VGLPLSTCQTYIK 82
I
Sbjct: 65 RDFDCCLVVPLIA 77
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 38.7 bits (90), Expect = 6e-06
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 10 EIVVVPKAKGEILGVVIV---ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNG 66
E+ ++ KG LG I + ++ I + GAA + G+L IGD+++AVN
Sbjct: 4 EVNLLKGPKG--LGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNN 61
Query: 67 VSLVGLPLSTCQTYIK 82
+L + +K
Sbjct: 62 TNLQDVRHEEAVASLK 77
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 38.4 bits (89), Expect = 8e-06
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
IV + K G LG I G S L + I+ + P A R L GDQ++AVN V
Sbjct: 18 IVTLKKPPGAQLGFNIR-GGKASQLG-IFISKVIPDSDAHRA-GLQEGDQVLAVNDVDFQ 74
Query: 71 GLPLSTCQTYIK 82
+ S +K
Sbjct: 75 DIEHSKAVEILK 86
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 38.4 bits (89), Expect = 8e-06
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARC-GQLNIGDQIIAVNGVSL 69
++ + + G + M V+++ +AP A C +LN GDQ++ +NG +
Sbjct: 11 LIRMKPDENGRFGFNVKGGYDQKM--PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDI 68
Query: 70 VGLPLSTCQTYIK 82
+IK
Sbjct: 69 AEHTHDQVVLFIK 81
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 38.0 bits (88), Expect = 1e-05
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPT------VVIANLAPAGAAARCGQLNIGDQIIAVN 65
V + K G LG+ + + T + + + P GAA G+++ GD+++AVN
Sbjct: 8 VELAKTDGS-LGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGDRVLAVN 66
Query: 66 GVSLVGLPLSTCQTYIK 82
GVSL G ++
Sbjct: 67 GVSLEGATHKQAVETLR 83
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 37.6 bits (87), Expect = 1e-05
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 9 SEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
S + V A G I G T +I A L GD I+A+NG S
Sbjct: 5 SSGLTVDVAGPAPWGFRIS---GGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQS 61
Query: 69 LVGLPLSTCQTYIK 82
+ + Q+ I+
Sbjct: 62 AENMLHAEAQSKIR 75
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 37.6 bits (87), Expect = 2e-05
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 10 EIVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+ V KG G I G + + + LA G A R G++ +GDQII +NG S
Sbjct: 11 DYFTVDMEKGAKGFGFSIR-GGREYKMD-LYVLRLAEDGPAIRNGRMRVGDQIIEINGES 68
Query: 69 LVGLPLSTCQTYIK 82
+ + IK
Sbjct: 69 TRDMTHARAIELIK 82
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 37.6 bits (87), Expect = 2e-05
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 6 PVTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
P +V+ + LG IV G + I+ + G A G+L GDQI++VN
Sbjct: 7 PREPRRIVIHRGSTG-LGFNIVG---GEDGEGIFISFILAGGPADLSGELRKGDQILSVN 62
Query: 66 GVSLVGLPLSTCQTYIK 82
GV L +K
Sbjct: 63 GVDLRNASHEQAAIALK 79
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 36.8 bits (85), Expect = 3e-05
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 22 LGVVIV-ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTY 80
LG IV G + + + GAA+ G+L GDQIIAVNG SL G+
Sbjct: 15 LGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAI 74
Query: 81 IK 82
+K
Sbjct: 75 LK 76
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 36.9 bits (85), Expect = 3e-05
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 17 AKGEILGVVIV--ESGWG-SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLP 73
+ E++ + IV G+G ++ + + C L GD I+ +N ++ L
Sbjct: 7 GQAELMTLTIVKGAQGFGFTIADSPTGQRVKQILDIQGCPGLCEGDLIVEINQQNVQNLS 66
Query: 74 LSTCQTYIK 82
+ +K
Sbjct: 67 HTEVVDILK 75
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 36.9 bits (85), Expect = 3e-05
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 12 VVVPKAKGEILGVVIVESGWGSML----------PTVVIANLAPAGAAARCGQLNIGDQI 61
V++ K E G V+ + + + + ++ G A R G L +GD +
Sbjct: 9 VLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFL 67
Query: 62 IAVNGVSLVGLPLSTCQTYIK 82
I VNG ++V + I+
Sbjct: 68 IEVNGQNVVKVGHRQVVNMIR 88
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 37.0 bits (85), Expect = 5e-05
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 8 TSEIVVVPKAKGEI-LGVVIVESGWGSML--PTVVIANLAPAGAAARCGQLNIGDQIIAV 64
+ + V K LG + G GS+ + I + A+ + + GD+I+ +
Sbjct: 27 EATVCTVTLEKMSAGLGFSLE-GGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQL 85
Query: 65 NGVSLVGLPLSTCQTYIK 82
G ++ GL IK
Sbjct: 86 GGTAMQGLTRFEAWNIIK 103
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 36.0 bits (83), Expect = 6e-05
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
V++ K + +G+ + G + + + A+ G L GDQ++ +NG + G
Sbjct: 6 VILCKDQDGKIGLRLKSIDNG-----IFVQLVQANSPASLVG-LRFGDQVLQINGENCAG 59
Query: 72 LPLSTCQTYIK 82
+K
Sbjct: 60 WSSDKAHKVLK 70
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 85
Score = 35.6 bits (82), Expect = 7e-05
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 14 VPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLP 73
V G + G + + G+ A QL+ GD ++A++GV+ +
Sbjct: 5 VTLTGPGPWGFRLQ---GGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMT 61
Query: 74 LSTCQTYIK 82
Q IK
Sbjct: 62 HLEAQNKIK 70
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 35.6 bits (82), Expect = 1e-04
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 11 IVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLV 70
+ + K G + I + P A + G L GD+++ VNG ++
Sbjct: 6 LCCLEKGPNG-YGFHLH---GEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVE 60
Query: 71 GLPLSTCQTYIK 82
+ I+
Sbjct: 61 KETHQQVVSRIR 72
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 35.7 bits (82), Expect = 1e-04
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 23 GVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
G V++ GS + ++ + +G AA+ G L I D+II VNG L K
Sbjct: 28 GRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFK 87
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 34.9 bits (80), Expect = 2e-04
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
+ ++ +A GAA R G L +GD+++++NGV + + +
Sbjct: 40 IFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 103
Score = 35.0 bits (80), Expect = 2e-04
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 8 TSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGV 67
+S VV+P G + G P V+ G+ A L GD I+A++G
Sbjct: 5 SSGNVVLPGPAP--WGFRLS-GGIDFNQPLVITRITP--GSKAAAANLCPGDVILAIDGF 59
Query: 68 SLVGLPLSTCQTYIK 82
+ + Q IK
Sbjct: 60 GTESMTHADAQDRIK 74
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 34.0 bits (78), Expect = 3e-04
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 28 ESGWG---SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
+ G+G V + + G A R G L D ++ +N + I+
Sbjct: 7 KDGFGFTICCDSPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIR 63
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 33.7 bits (77), Expect = 4e-04
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 10 EIVVVPKAKGEILGVVIV----ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVN 65
E+ + + LG+ I + + + I+ ++ G AAR + +GD+++ VN
Sbjct: 9 ELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARA-GVRVGDKLLEVN 67
Query: 66 GVSLVGLPLSTCQTYIK 82
GV+L G ++
Sbjct: 68 GVALQGAEHHEAVEALR 84
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 33.3 bits (76), Expect = 7e-04
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 10 EIVVVPKAKGEI-LGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVS 68
+V + +AK LG I G + + ++ + P A + G L +GDQI+ VN S
Sbjct: 10 RLVSLRRAKAHEGLGFSIR-GGSEHGVG-IYVSLVEPGSLAEKEG-LRVGDQILRVNDKS 66
Query: 69 LVGLPLSTCQTYIK 82
L + + +K
Sbjct: 67 LARVTHAEAVKALK 80
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 31.3 bits (71), Expect = 0.003
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 28 ESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
G + +I +L G A R G + +G +II +NG S+V P +
Sbjct: 12 RYQLGFSVQNGIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILS 65
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 30.4 bits (68), Expect = 0.009
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 19 GEILGVVIV-ESGWG------SMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVG 71
G V +V + WG + + G A + IGD +++++G+S G
Sbjct: 4 GSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQG 63
Query: 72 LPLSTCQTYIK 82
+ Q IK
Sbjct: 64 MTHLEAQNKIK 74
>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 91
Score = 26.5 bits (58), Expect = 0.23
Identities = 6/48 (12%), Positives = 11/48 (22%)
Query: 40 IANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIKVNHHL 87
+N G G I ++G ++ K
Sbjct: 24 YSNEGEKSPIFEYGIDPTGYLIEDIDGETVGAGSNIYRVLSEKAGTSA 71
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 82
Score = 26.5 bits (58), Expect = 0.24
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 30 GWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSLVGLPLSTCQTYIK 82
G + I ++ +AAR G L I +NG +++GL S +
Sbjct: 17 HVGFIFKNGKITSIVKDSSAARNGLL-TEHNICEINGQNVIGLKDSQIADILS 68
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C,
EpsC {Vibrio cholerae [TaxId: 666]}
Length = 87
Score = 25.3 bits (55), Expect = 0.60
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
++ G L GD +A+NG+ L
Sbjct: 21 YRVSPGKDPVLFESIG-LQDGDMAVALNGLDL 51
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 495
Score = 25.8 bits (56), Expect = 0.66
Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 19 GEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNI---GDQIIAVNGVSLVGLPLS 75
G +L VV V L V++ + + + Q+ + + LPL
Sbjct: 431 GTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLH 490
Query: 76 TCQTY 80
C Y
Sbjct: 491 RCDIY 495
>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal
domains {Escherichia coli [TaxId: 562]}
Length = 88
Score = 24.5 bits (53), Expect = 1.4
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 16 KAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
+ G+ E VV+ N+ AA+ G L GD II N ++
Sbjct: 5 DSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAV 57
>d1lcya1 b.36.1.4 (A:226-325) Mitochondrial serine protease HtrA2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 23.8 bits (51), Expect = 2.6
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 38 VVIANLAPAGAAARCGQLNIGDQIIAVNGVSL 69
V+I + A R G L GD I+A+ +
Sbjct: 33 VLIHKVILGSPAHRAG-LRPGDVILAIGEQMV 63
>d1esoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Escherichia
coli [TaxId: 562]}
Length = 154
Score = 23.9 bits (51), Expect = 2.8
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 12 VVVPKAKGEILGVVIVESGWGSMLPTVVIANLAP 45
+V + G+ +G V + + + + L P
Sbjct: 9 LVTSQGVGQSIGSVTITETDKGLEFSPDLKALPP 42
>d1eqwa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Salmonella
typhimurium [TaxId: 90371]}
Length = 155
Score = 23.8 bits (51), Expect = 3.2
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 13 VVPKAKGEILGVVIVESGWGSMLPTVVIANLAP 45
+ GE +G + V +L T + L P
Sbjct: 10 ALSSGTGENIGEITVSETPYGLLFTPHLNGLTP 42
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 266
Score = 22.9 bits (49), Expect = 7.3
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 7 VTSEIVVVPKAKGEILGVVIVESGWGSMLPTVVIANLAPAGAAARCGQLNIGDQIIAVNG 66
+T+ I GE VV+VE G TV P A R + IG +
Sbjct: 119 ITNAIKERVLEGGEGHDVVLVEIG-----GTVGDIESLPFLEAIRQMAVEIGREHTLFMH 173
Query: 67 VSLV 70
++LV
Sbjct: 174 LTLV 177
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase
{Thermotoga maritima [TaxId: 2336]}
Length = 296
Score = 22.7 bits (47), Expect = 8.7
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 40 IANLAPAGAAARCGQLNIGDQII 62
I N A L + ++ I
Sbjct: 264 IENAGVALKTLEATGLPLSEKAI 286
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0680 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 329,628
Number of extensions: 12749
Number of successful extensions: 92
Number of sequences better than 10.0: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 69
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)