Query psy3497
Match_columns 151
No_of_seqs 154 out of 1083
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 18:13:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 7E-55 2.4E-59 312.9 19.4 148 3-150 4-151 (151)
2 2r0j_A Ubiquitin carrier prote 100.0 4.8E-55 1.6E-59 313.1 17.5 148 4-151 2-149 (149)
3 2aak_A UBC1, ubiquitin conjuga 100.0 2.2E-54 7.7E-59 310.6 18.8 151 1-151 1-152 (152)
4 2c2v_B Ubiquitin-conjugating e 100.0 1.6E-54 5.3E-59 312.0 17.0 147 4-150 6-152 (154)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.9E-54 1.4E-58 313.9 18.2 149 1-149 1-150 (169)
6 2ayv_A Ubiquitin-conjugating e 100.0 1.2E-53 4.1E-58 310.5 19.8 146 3-148 21-166 (166)
7 1zdn_A Ubiquitin-conjugating e 100.0 7.2E-54 2.5E-58 309.7 17.5 145 4-148 14-158 (158)
8 2c4o_A Ubiquitin-conjugating e 100.0 1.4E-53 4.9E-58 309.9 19.1 146 4-149 20-165 (165)
9 1z2u_A Ubiquitin-conjugating e 100.0 1.5E-53 5.3E-58 305.6 18.5 146 4-149 5-150 (150)
10 1jat_A Ubiquitin-conjugating e 100.0 8.2E-54 2.8E-58 308.5 16.3 149 2-150 4-152 (155)
11 1yh2_A HSPC150 protein similar 100.0 4.1E-53 1.4E-57 308.7 19.4 148 3-150 4-155 (169)
12 1fxt_A Ubiquitin-conjugating e 100.0 8E-54 2.7E-58 306.8 15.3 146 4-149 2-149 (149)
13 2bep_A Ubiquitin-conjugating e 100.0 8.8E-53 3E-57 304.3 19.1 150 1-150 5-159 (159)
14 3bzh_A Ubiquitin-conjugating e 100.0 6.1E-53 2.1E-57 313.4 18.5 148 2-149 47-194 (194)
15 2e2c_A Ubiquitin conjugating e 100.0 6.2E-53 2.1E-57 304.2 17.9 146 4-150 10-155 (156)
16 3h8k_A Ubiquitin-conjugating e 100.0 1.3E-52 4.4E-57 304.8 19.5 147 3-149 3-163 (164)
17 2ucz_A UBC7, ubiquitin conjuga 100.0 9.6E-53 3.3E-57 305.8 18.3 149 1-149 1-164 (165)
18 2gjd_A Ubiquitin-conjugating e 100.0 1.1E-52 3.7E-57 303.2 17.1 149 1-149 1-157 (157)
19 3rcz_B SUMO-conjugating enzyme 100.0 1.5E-52 5.2E-57 303.9 17.6 146 4-149 11-163 (163)
20 2pwq_A Ubiquitin conjugating e 100.0 1.4E-52 4.7E-57 315.9 17.2 149 2-150 22-171 (216)
21 3k9o_A Ubiquitin-conjugating e 100.0 3.4E-52 1.2E-56 311.4 19.0 150 1-150 2-156 (201)
22 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.7E-52 9.2E-57 309.6 18.3 148 3-150 32-193 (193)
23 1wzv_A Ubiquitin-conjugating e 100.0 5.1E-52 1.8E-56 299.1 17.7 146 4-150 5-152 (155)
24 2grr_A Ubiquitin-conjugating e 100.0 4.4E-52 1.5E-56 301.1 17.1 150 1-150 4-161 (161)
25 3fn1_B NEDD8-conjugating enzym 100.0 2E-51 6.8E-56 299.3 18.1 148 1-149 12-167 (167)
26 1i7k_A Ubiquitin-conjugating e 100.0 1.2E-51 4.2E-56 303.0 16.2 146 4-150 31-176 (179)
27 1tte_A Ubiquitin-conjugating e 100.0 5.1E-52 1.7E-56 312.6 13.2 149 2-150 1-151 (215)
28 3e46_A Ubiquitin-conjugating e 100.0 9.3E-51 3.2E-55 312.0 19.0 147 4-150 58-208 (253)
29 2onu_A Ubiquitin-conjugating e 100.0 1.2E-51 4.1E-56 296.2 11.1 146 2-150 1-148 (152)
30 3rz3_A Ubiquitin-conjugating e 100.0 2E-50 6.9E-55 297.8 17.8 148 2-149 6-173 (183)
31 1yrv_A Ubiquitin-conjugating l 100.0 1.3E-50 4.5E-55 295.2 15.0 145 1-146 20-168 (169)
32 2y9m_A Ubiquitin-conjugating e 100.0 9.6E-50 3.3E-54 291.6 17.8 149 1-149 3-168 (172)
33 1y8x_A Ubiquitin-conjugating e 100.0 8.7E-50 3E-54 288.7 17.3 143 1-146 4-147 (160)
34 2awf_A Ubiquitin-conjugating e 100.0 4.2E-50 1.4E-54 293.4 15.4 141 3-143 17-172 (172)
35 2z5d_A Ubiquitin-conjugating e 100.0 7.9E-51 2.7E-55 298.4 11.5 143 4-150 26-170 (179)
36 1c4z_D UBCH7, ubiquitin conjug 100.0 8.5E-51 2.9E-55 292.5 11.4 148 1-150 1-150 (154)
37 2nvu_C NEDD8-conjugating enzym 100.0 6.9E-49 2.3E-53 288.7 17.1 143 2-147 25-168 (180)
38 4ddg_A Ubiquitin-conjugating e 100.0 1E-48 3.5E-53 318.4 18.5 149 2-150 2-150 (399)
39 1yf9_A Ubiquitin carrier prote 100.0 4.3E-49 1.5E-53 287.7 13.9 143 4-150 13-157 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 2.9E-48 9.9E-53 287.6 15.8 145 1-148 27-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 2.1E-46 7.1E-51 272.8 12.7 142 1-142 5-164 (167)
42 2fo3_A Ubiquitin-conjugating e 100.0 4.4E-44 1.5E-48 249.3 13.9 118 1-118 4-122 (125)
43 3ceg_A Baculoviral IAP repeat- 100.0 5.6E-44 1.9E-48 281.6 14.2 147 4-150 77-244 (323)
44 2q0v_A Ubiquitin-conjugating e 100.0 1.6E-44 5.5E-49 259.9 10.1 130 2-132 20-156 (156)
45 2h2y_A Ubiquitin-conjugating e 100.0 7.5E-43 2.6E-47 246.3 15.5 117 1-117 18-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 7.5E-43 2.6E-47 251.9 12.4 124 3-126 25-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 6.8E-44 2.3E-48 252.2 6.7 128 1-129 2-138 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 2.5E-42 8.5E-47 243.4 12.0 113 1-113 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 4.2E-42 1.4E-46 250.4 9.4 124 3-126 35-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 5.1E-39 1.8E-43 237.4 15.7 116 3-120 14-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.6E-40 9.1E-45 244.1 3.3 138 4-149 28-182 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.1E-29 7E-34 180.1 0.5 114 5-132 34-162 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.5E-20 5.3E-25 135.1 10.9 114 5-119 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.7E-20 5.9E-25 131.3 -0.8 95 5-105 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 4.8E-15 1.7E-19 104.7 7.3 102 7-114 24-138 (146)
56 2ebm_A RWD domain-containing p 97.4 0.0044 1.5E-07 41.9 11.2 71 1-73 8-78 (128)
57 2yz0_A Serine/threonine-protei 96.5 0.017 6E-07 39.4 8.4 68 5-73 12-85 (138)
58 2day_A Ring finger protein 25; 96.1 0.045 1.5E-06 36.8 8.6 69 6-74 11-83 (128)
59 3zqs_A E3 ubiquitin-protein li 95.7 0.12 4.2E-06 37.3 9.7 84 6-113 4-87 (186)
60 2ebk_A RWD domain-containing p 95.4 0.12 4.2E-06 34.6 8.5 67 5-72 9-78 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 95.2 0.14 4.8E-06 34.6 8.4 70 3-73 10-86 (137)
62 2daw_A RWD domain containing p 93.7 0.4 1.4E-05 33.3 8.0 23 51-73 76-98 (154)
63 2cwb_A Chimera of immunoglobul 93.6 0.012 4.3E-07 38.9 0.0 38 112-149 18-55 (108)
64 2dax_A Protein C21ORF6; RWD do 90.3 0.16 5.5E-06 35.1 2.5 24 50-73 73-96 (152)
65 3u3c_B Paxillin LD2 peptide; 4 64.2 4.3 0.00015 18.9 1.7 19 5-23 7-25 (26)
66 1zoq_C CREB-binding protein, i 42.8 21 0.00073 19.4 2.5 43 105-149 3-46 (47)
67 3qrl_A Transcription initiatio 37.4 95 0.0033 21.1 5.8 44 31-76 31-77 (140)
68 2bum_A Protocatechuate 3,4-dio 36.4 35 0.0012 24.7 3.7 25 48-72 109-138 (209)
69 3rls_A YAF9, protein AF-9 homo 32.8 1.2E+02 0.0043 21.3 5.9 45 30-76 30-74 (175)
70 3g9r_A Fusion complex of HIV-1 27.3 21 0.00072 18.8 0.8 16 1-16 26-41 (42)
71 2f4m_B UV excision repair prot 27.2 60 0.002 18.7 2.9 20 121-140 37-56 (61)
72 3s7v_A Major capsid protein VP 24.8 1.6E+02 0.0054 22.1 5.4 38 48-88 200-239 (277)
73 1pve_A HHR23B, UV excision rep 24.4 63 0.0022 19.3 2.7 21 121-141 39-59 (72)
74 2nqc_A Filamin-C; immunoglobul 23.4 1.7E+02 0.0057 19.4 6.4 28 45-72 104-133 (138)
75 2ccv_A Helix pomatia agglutini 23.3 1.3E+02 0.0045 18.8 4.3 24 50-74 29-52 (101)
76 1m46_B IQ4, IQ4 motif from MYO 23.3 55 0.0019 15.1 1.7 13 4-16 9-21 (26)
77 1u9d_A Hypothetical protein VC 21.6 1.3E+02 0.0045 19.7 4.1 29 4-32 32-60 (122)
78 3t63_M 3,4-PCD, protocatechuat 20.9 60 0.002 24.1 2.5 24 49-72 134-164 (238)
79 2bum_B Protocatechuate 3,4-dio 20.8 60 0.002 24.1 2.5 25 48-72 134-165 (241)
80 1sid_A Polyomavirus coat prote 20.6 1.9E+02 0.0064 22.8 5.3 23 65-87 249-273 (383)
81 1vps_A Polyomavirus VP1 pentam 20.1 2.5E+02 0.0086 21.2 5.7 39 47-88 203-243 (289)
82 1taf_B TFIID TBP associated fa 20.0 1.3E+02 0.0045 17.7 3.5 30 119-148 22-51 (70)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=7e-55 Score=312.87 Aligned_cols=148 Identities=49% Similarity=0.876 Sum_probs=145.3
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
.+.|||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 83 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 83 ~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.|||++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 2
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.8e-55 Score=313.10 Aligned_cols=148 Identities=66% Similarity=1.148 Sum_probs=144.6
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccCC
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMDN 151 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (151)
|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++|
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 149 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANNN 149 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC-
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.2e-54 Score=310.57 Aligned_cols=151 Identities=38% Similarity=0.789 Sum_probs=146.0
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
||+ +.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 774 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccCC
Q psy3497 80 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMDN 151 (151)
Q Consensus 80 v~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (151)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.+
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~~ 152 (152)
T 2aak_A 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 (152)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999865
No 4
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-54 Score=311.96 Aligned_cols=147 Identities=84% Similarity=1.396 Sum_probs=142.3
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-54 Score=313.89 Aligned_cols=149 Identities=36% Similarity=0.745 Sum_probs=145.1
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
||+ +.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 774 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 80 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 80 v~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|+.+|.||+++|.+.|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 81 I~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 81 VYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-53 Score=310.52 Aligned_cols=146 Identities=50% Similarity=0.899 Sum_probs=143.4
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
.+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 83 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 83 ~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999998
No 7
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-54 Score=309.67 Aligned_cols=145 Identities=39% Similarity=0.722 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.|||++|++|+++|.++||+|+++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998
No 8
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.4e-53 Score=309.91 Aligned_cols=146 Identities=49% Similarity=0.884 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 20 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~ 99 (165)
T 2c4o_A 20 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 99 (165)
T ss_dssp HHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 100 G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 100 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999995
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.5e-53 Score=305.59 Aligned_cols=146 Identities=48% Similarity=0.864 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN 84 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 85 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999995
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=8.2e-54 Score=308.53 Aligned_cols=149 Identities=69% Similarity=1.222 Sum_probs=145.3
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
+.+.+||++|++++++++++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 82 RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 82 ~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 11
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.1e-53 Score=308.69 Aligned_cols=148 Identities=46% Similarity=0.865 Sum_probs=144.7
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
.+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 83 (169)
T 1yh2_A 4 QRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDS 83 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCC----CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 83 LGRICLDILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 83 ~G~icl~~l~----~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 84 ~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 84 AGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp TCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 9999999998 8999999999999999999999999999999999999999999999999999999975
No 12
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8e-54 Score=306.77 Aligned_cols=146 Identities=38% Similarity=0.743 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDES-NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
+.+||++|++++++++++||++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999999999999999999877 9999999999999999999999999999999999999999999999999998
Q ss_pred -CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 83 -LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 83 -~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999995
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.8e-53 Score=304.29 Aligned_cols=150 Identities=44% Similarity=0.753 Sum_probs=144.1
Q ss_pred CCc-hHHHHHHHHHHhhhC---CCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccc
Q psy3497 1 MSA-LPRRIIKETQRLMQE---PVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIY 76 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~---~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 76 (151)
||+ +.+||++|+++++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 553 689999999999985 5789999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 77 HPNIDR-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 77 Hpnv~~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
||||+. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 999995 99999999999999999999999999999999999999999999999999999999999999999974
No 14
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=6.1e-53 Score=313.40 Aligned_cols=148 Identities=46% Similarity=0.776 Sum_probs=144.8
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
+.+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 82 RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 82 ~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
.+|.||+++|.++|+|+++|.+||.+|++||.+||+++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 127 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999995
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-53 Score=304.23 Aligned_cols=146 Identities=38% Similarity=0.725 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 89 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQS 89 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||.+
T Consensus 90 G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 90 GNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred ceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999 89999999999999999864
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.3e-52 Score=304.80 Aligned_cols=147 Identities=34% Similarity=0.654 Sum_probs=142.6
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDES-NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
.+.|||++|+++++++++.||++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 4689999999999999999999998865 999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCC-------------CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 82 RLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 82 ~~G~icl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
.+|.||+++|. ++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++++
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~ 162 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSL 162 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 99999999996 78999999999999999999999999999999999999999999999999999997
Q ss_pred c
Q psy3497 149 M 149 (151)
Q Consensus 149 ~ 149 (151)
.
T Consensus 163 ~ 163 (164)
T 3h8k_A 163 G 163 (164)
T ss_dssp T
T ss_pred c
Confidence 4
No 17
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-53 Score=305.75 Aligned_cols=149 Identities=37% Similarity=0.697 Sum_probs=143.0
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCC-CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccc
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDE-SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHP 78 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 78 (151)
||+ +.+||++|+++|+++++.||++.+.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 664 68999999999999999999999975 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEeccC-------------CCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHH
Q psy3497 79 NIDRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTR 145 (151)
Q Consensus 79 nv~~~G~icl~~l-------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 145 (151)
||+.+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999 689999999999999999999999999999999999999999999999999999
Q ss_pred Hhcc
Q psy3497 146 KYAM 149 (151)
Q Consensus 146 ~~a~ 149 (151)
+++.
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9974
No 18
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.1e-52 Score=303.25 Aligned_cols=149 Identities=29% Similarity=0.595 Sum_probs=142.0
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCC-----CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeec
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDE-----SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
||+ +.+||++|+++++++++.||++.|.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 764 68999999999999999999998864 489999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcEEeccCCC--CCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 75 IYHPNIDRLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 75 i~Hpnv~~~G~icl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
+|||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999987 79999999999999999999999999999999999999999999999999999995
No 19
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-52 Score=303.90 Aligned_cols=146 Identities=32% Similarity=0.627 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCC-----CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccc
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDES-----NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHP 78 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~-----~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 78 (151)
+.+||++|+++++++++.||++.|.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 589999999999999999999999865 999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEeccCCC--CCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 79 NIDRLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 79 nv~~~G~icl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999975 49999999999999999999999999999999999999999999999999999984
No 20
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.4e-52 Score=315.86 Aligned_cols=149 Identities=48% Similarity=0.826 Sum_probs=144.8
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
+.+.+||++|+++++++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 82 R-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 82 ~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
. +|.||+++|.+.|+|+++|++||.+|++||.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 102 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 102 SQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp TTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 5 89999999999999999999999999999999999999999999999999999999999999999975
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.4e-52 Score=311.39 Aligned_cols=150 Identities=44% Similarity=0.753 Sum_probs=143.2
Q ss_pred CCc-hHHHHHHHHHHhhhC---CCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccc
Q psy3497 1 MSA-LPRRIIKETQRLMQE---PVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIY 76 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~---~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 76 (151)
||+ +.+||++|+++++++ ++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 664 689999999999987 3689999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 77 HPNIDR-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 77 Hpnv~~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
||||+. +|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999995 99999999999999999999999999999999999999999999999999999999999999999974
No 22
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-52 Score=309.59 Aligned_cols=148 Identities=43% Similarity=0.778 Sum_probs=140.4
Q ss_pred chHHHHHHHHHHhhhCCC-------------CCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeE
Q psy3497 3 ALPRRIIKETQRLMQEPV-------------PGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKV 69 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~-------------~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v 69 (151)
.+.+||++|+++++++++ .||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 357899999999999886 7999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccccC-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 70 RFITKIYHPNIDR-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 70 ~f~t~i~Hpnv~~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
+|.|+||||||+. +|.||+++|.+.|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 9999999999995 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q psy3497 149 MD 150 (151)
Q Consensus 149 ~~ 150 (151)
+.
T Consensus 192 ~~ 193 (193)
T 2f4z_A 192 KE 193 (193)
T ss_dssp C-
T ss_pred cC
Confidence 73
No 23
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=5.1e-52 Score=299.14 Aligned_cols=146 Identities=34% Similarity=0.699 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhhCCCCCEEE-EeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISA-VPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v-~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
+.+||++|+++++++++.||.+ .++++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 83 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE 83 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC
Confidence 6899999999999999999999 788999999999999 99999999999999999999999999999999999999999
Q ss_pred CCcEEeccC-CCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 83 LGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 83 ~G~icl~~l-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 84 NGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999 89999999999999999999999999999999999999999999999999999999975
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.4e-52 Score=301.14 Aligned_cols=150 Identities=33% Similarity=0.662 Sum_probs=142.9
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCC-----CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeec
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDE-----SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
||+ +.+||++|+++++++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 664 57999999999999999999998863 689999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcEEeccCCC--CCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 75 IYHPNIDRLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 75 i~Hpnv~~~G~icl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||..
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999975 899999999999999999999999999999999999999999999999999999963
No 25
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2e-51 Score=299.34 Aligned_cols=148 Identities=28% Similarity=0.560 Sum_probs=141.5
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEEeC-CCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAVPD-ESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~~~-~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
++.+.|||++|+++++++++.||++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 12 ~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 90 (167)
T 3fn1_B 12 VSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPN 90 (167)
T ss_dssp CCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSS
T ss_pred hhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCC
Confidence 3567899999999999999999999864 68899999999 899999999999999999999999999999999999999
Q ss_pred ccCCCcEEeccCCC------CCCccCCHHHHHHHHHHhhcC-CCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 80 IDRLGRICLDILKD------KWSPALQIRTVLLSIQALLSA-PNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 80 v~~~G~icl~~l~~------~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|+.+|.||+++|.. +|+|+++|++||.+|+++|.+ ||+++|+|.|||++|++|+++|.++||+|+++||+
T Consensus 91 v~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 91 ITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp BCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999975 799999999999999999999 79999999999999999999999999999999995
No 26
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-51 Score=302.97 Aligned_cols=146 Identities=40% Similarity=0.652 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 83 (151)
+.+||++|+++++++++.||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 110 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQ 110 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 84 G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
|.||+++|.+.|+|+++|++||.+|+++|.+|++++|+|.+||++| +|+++|.++|++++++++..
T Consensus 111 G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 111 GNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999 99999999999999999864
No 27
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=5.1e-52 Score=312.57 Aligned_cols=149 Identities=38% Similarity=0.741 Sum_probs=143.8
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDES-NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNI 80 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 80 (151)
|++.+||++|++++++++++||++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 1 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp CTTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred ChHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 45789999999999999999999999866 56799999999999999999999999999999999999999999999999
Q ss_pred cC-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 81 DR-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 81 ~~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+. +|.||+++|.++|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999975
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=9.3e-51 Score=311.96 Aligned_cols=147 Identities=44% Similarity=0.756 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHhhhC---CCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccc
Q psy3497 4 LPRRIIKETQRLMQE---PVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNI 80 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~---~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 80 (151)
+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 589999999999987 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 81 DR-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 81 ~~-~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+. +|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 95 99999999999999999999999999999999999999999999999999999999999999999974
No 29
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-51 Score=296.24 Aligned_cols=146 Identities=31% Similarity=0.668 Sum_probs=138.8
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
+++.|||++|++++++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 1 GTSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp --CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred ChHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 35679999999999874 788999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCccCCHHHHHHH-HHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 82 R-LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 82 ~-~G~icl~~l~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
. +|.||+++|.++|+|+++|++||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 78 ~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 78 EASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 5 9999999999999999999999999 6899999999999999999999999999999999999999975
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2e-50 Score=297.80 Aligned_cols=148 Identities=33% Similarity=0.652 Sum_probs=141.3
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAV-PDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNI 80 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 80 (151)
+.+.|||++|+++++++++.||++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 6 ~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 85 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNI 85 (183)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCC
Confidence 4578999999999999999999998 678899999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCC-------------CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHH------CHHHHHHHHH
Q psy3497 81 DRLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV------NEAEAIRNAK 141 (151)
Q Consensus 81 ~~~G~icl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~------~~~~f~~~~~ 141 (151)
+++|.||+++|. ++|+|+++|++||.+|++||.+||+++|+|.|||++|++ |+++|.++||
T Consensus 86 ~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~ 165 (183)
T 3rz3_A 86 YETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIR 165 (183)
T ss_dssp CTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHH
Confidence 999999999996 889999999999999999999999999999999999999 7899999999
Q ss_pred HHHHHhcc
Q psy3497 142 EWTRKYAM 149 (151)
Q Consensus 142 ~~~~~~a~ 149 (151)
+++++++.
T Consensus 166 ~~v~~s~~ 173 (183)
T 3rz3_A 166 KQVLGTKV 173 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=295.19 Aligned_cols=145 Identities=25% Similarity=0.479 Sum_probs=138.8
Q ss_pred CCc-hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSA-LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
|++ +.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 554 5799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCCCcEEeccCC--CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHH
Q psy3497 80 I-DRLGRICLDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRK 146 (151)
Q Consensus 80 v-~~~G~icl~~l~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 146 (151)
| +.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.|||++|++|+++|.++ |+++++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9 789999999998 89999999999999999999999999999999999999999999999 888764
No 32
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=9.6e-50 Score=291.59 Aligned_cols=149 Identities=29% Similarity=0.553 Sum_probs=139.1
Q ss_pred CCc-hHHHHHHHHHHhhh-C-C------CC---CEEEEe-CCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCC
Q psy3497 1 MSA-LPRRIIKETQRLMQ-E-P------VP---GISAVP-DESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAP 67 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~-~-~------~~---~i~v~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP 67 (151)
||+ +.+||++|++++++ + + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 664 68999999999998 4 3 33 467788 7889999999999999999999999999999999999999
Q ss_pred eEEEee-cccccccc-CCCcEEeccCC-CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHH-CHHHHHHHHHHH
Q psy3497 68 KVRFIT-KIYHPNID-RLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV-NEAEAIRNAKEW 143 (151)
Q Consensus 68 ~v~f~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~-~~~~f~~~~~~~ 143 (151)
+|+|.| +||||||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.|||++|++ |+++|.++||+|
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~ 162 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 162 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999 99999996 69999999998 899999999999999999999999999999999999999 999999999999
Q ss_pred HHHhcc
Q psy3497 144 TRKYAM 149 (151)
Q Consensus 144 ~~~~a~ 149 (151)
+++++.
T Consensus 163 ~~~~~~ 168 (172)
T 2y9m_A 163 LAERER 168 (172)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999985
No 33
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.7e-50 Score=288.75 Aligned_cols=143 Identities=31% Similarity=0.593 Sum_probs=137.7
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAV-PDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
|+.+.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 567889999999999 577899998 7899999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHH
Q psy3497 80 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRK 146 (151)
Q Consensus 80 v~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 146 (151)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++.
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 81 IDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999885
No 34
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.2e-50 Score=293.45 Aligned_cols=141 Identities=34% Similarity=0.715 Sum_probs=109.1
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCC-CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDE-SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
.+.|||++|+++|+++++.||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 468999999999999999999999875 7999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCC-------------CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHH-HHHHHHHHH
Q psy3497 82 RLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEA-EAIRNAKEW 143 (151)
Q Consensus 82 ~~G~icl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~-~f~~~~~~~ 143 (151)
.+|.||+++|. +.|+|+++|++||.+|++||.+||+++|+|.|||++|++|++ +|.++||+|
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999996 689999999999999999999999999999999999999999 999999986
No 35
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-51 Score=298.42 Aligned_cols=143 Identities=33% Similarity=0.680 Sum_probs=137.4
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC-
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR- 82 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~- 82 (151)
+.|||++|+++++. .|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 58999999999985 57888887 67899999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCccCCHHHHHHH-HHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 83 LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 83 ~G~icl~~l~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|.||+++|.++|+|+++|++||.+ |++||.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999974
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=8.5e-51 Score=292.49 Aligned_cols=148 Identities=34% Similarity=0.751 Sum_probs=137.5
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEEe-CCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccc
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAVP-DESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPN 79 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 79 (151)
|+ +.+||++|+++++++++.|+.+.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 m~-a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 1 MA-ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp ----CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred Cc-HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 44 568999999999999999998654 6789999999998 99999999999999999999999999999999999999
Q ss_pred ccCCCcEEeccCC-CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 80 IDRLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 80 v~~~G~icl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
|+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 79 v~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 79 IDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp BCTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 9999999999996 8999999999999999999999999999999999999999999999999999999974
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.9e-49 Score=288.74 Aligned_cols=143 Identities=31% Similarity=0.560 Sum_probs=137.2
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAV-PDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNI 80 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 80 (151)
+.+.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV 101 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 101 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCC
Confidence 45789999999999 577899998 7899999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHh
Q psy3497 81 DRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKY 147 (151)
Q Consensus 81 ~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 147 (151)
+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++..
T Consensus 102 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 102 DLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred CCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999998853
No 38
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1e-48 Score=318.45 Aligned_cols=149 Identities=47% Similarity=0.842 Sum_probs=145.9
Q ss_pred CchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccccccc
Q psy3497 2 SALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNID 81 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 81 (151)
|.+.|||++|++++++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 82 RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 82 ~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
++|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 ~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 82 SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-49 Score=287.73 Aligned_cols=143 Identities=31% Similarity=0.576 Sum_probs=135.6
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC-
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR- 82 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~- 82 (151)
+.+||++|++++++++. ++ +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 57999999999999874 44 35789999999999999999999999999999999999999999999999999995
Q ss_pred CCcEEeccCCCCCCccCCHHHHHHHH-HHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy3497 83 LGRICLDILKDKWSPALQIRTVLLSI-QALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAMD 150 (151)
Q Consensus 83 ~G~icl~~l~~~W~p~~~i~~vl~~i-~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (151)
+|.||+++|.++|+|+++|++||.+| ++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred CCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999997 799999999999999999999999999999999999999963
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.9e-48 Score=287.60 Aligned_cols=145 Identities=33% Similarity=0.600 Sum_probs=138.6
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEE----eCCCCCc---EEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEee
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAV----PDESNAR---YFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~----~~~~~~~---~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
++.+.+||++|+++++ +++|+++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 103 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK 103 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence 4567899999999998 67899998 8899999 9999997 88899999999999999999999999999999
Q ss_pred ccccccccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 74 KIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 74 ~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
++|||||+.+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|++.+.
T Consensus 104 ~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 104 KIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred CcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997664
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.1e-46 Score=272.80 Aligned_cols=142 Identities=24% Similarity=0.464 Sum_probs=132.6
Q ss_pred CCc-hHHHHHHHHHHhhhCC------------CCCEEEEeCCCCCcEEEEEEECCCCCCCC--CcEEEEEEECCCCCCCC
Q psy3497 1 MSA-LPRRIIKETQRLMQEP------------VPGISAVPDESNARYFHVIVTGPEDSPFE--GGLFKLELFLPEDYPMS 65 (151)
Q Consensus 1 ms~-~~kRl~~E~~~l~~~~------------~~~i~v~~~~~~~~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~YP~~ 65 (151)
||+ +.|||++|++++++++ +.|+.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 554 5799999999999876 77999999999999999999999999999 99999999999999999
Q ss_pred CCeEEEeeccccccccCCCcEEeccCCCCCCccCCHHHHHH-HHHHhhcC--CCCCCChhHHHHHHHHHCHHHHHHHHHH
Q psy3497 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLL-SIQALLSA--PNPDDPLANDVAELWKVNEAEAIRNAKE 142 (151)
Q Consensus 66 pP~v~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~vl~-~i~~ll~~--p~~~~p~n~eaa~~~~~~~~~f~~~~~~ 142 (151)
||+|+|.|++|||||+.+|.||+++|.++|+|+++++++|. .|++++.. |++++|+|.|||++|++|+++|.++||+
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 99999999999999999999999999999999999999765 56777775 8999999999999999999999999983
No 42
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-44 Score=249.33 Aligned_cols=118 Identities=31% Similarity=0.561 Sum_probs=106.5
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecc-cccc
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKI-YHPN 79 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 79 (151)
|+.+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 788899999999999999999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred ccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCCC
Q psy3497 80 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 118 (151)
Q Consensus 80 v~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~ 118 (151)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|+..
T Consensus 84 v~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999998864
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=281.56 Aligned_cols=147 Identities=31% Similarity=0.540 Sum_probs=137.4
Q ss_pred hHHHHHHHHHHhhhCCCC----CEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeec-----
Q psy3497 4 LPRRIIKETQRLMQEPVP----GISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITK----- 74 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~----~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~----- 74 (151)
+.+||++|+++|++++++ ++.+.+.++|+..|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 689999999999998776 45677889999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCcEEeccCC-------CCCCccC-CHHHHHHHHHHhhc--CCCCCCChhHHH--HHHHHHCHHHHHHHHHH
Q psy3497 75 IYHPNIDRLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLS--APNPDDPLANDV--AELWKVNEAEAIRNAKE 142 (151)
Q Consensus 75 i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~vl~~i~~ll~--~p~~~~p~n~ea--a~~~~~~~~~f~~~~~~ 142 (151)
+|||||+.+|.||+++|. ++|+|++ +|++||.+|++||. +|++++|+|.++ +.+|.+|+++|.++||+
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~ 236 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 236 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999997 6899999 89999999999996 577799999987 58999999999999999
Q ss_pred HHHHhccC
Q psy3497 143 WTRKYAMD 150 (151)
Q Consensus 143 ~~~~~a~~ 150 (151)
|+++||+.
T Consensus 237 ~t~k~A~~ 244 (323)
T 3ceg_A 237 ATVKWAML 244 (323)
T ss_dssp HHHHHTTH
T ss_pred HHHHHhhH
Confidence 99999963
No 44
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.6e-44 Score=259.94 Aligned_cols=130 Identities=25% Similarity=0.432 Sum_probs=119.6
Q ss_pred CchHHHHHHHHHHhhhC-CCCCEEEEeCC-C--CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecccc
Q psy3497 2 SALPRRIIKETQRLMQE-PVPGISAVPDE-S--NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYH 77 (151)
Q Consensus 2 s~~~kRl~~E~~~l~~~-~~~~i~v~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (151)
..+.+||++|+++++++ ++.|+++.+.. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 34689999999999998 78899998853 3 59999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcE---EeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHC
Q psy3497 78 PNIDRLGRI---CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVN 132 (151)
Q Consensus 78 pnv~~~G~i---cl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~ 132 (151)
|||+.+|.| |+++|. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|
T Consensus 100 PNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 100 SCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 999999999 888886 599999999999999999999999999999999999875
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.5e-43 Score=246.26 Aligned_cols=117 Identities=29% Similarity=0.560 Sum_probs=113.1
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeecc-cccc
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKI-YHPN 79 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 79 (151)
|+.+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 567889999999999999999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred ccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhcCCCC
Q psy3497 80 IDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 (151)
Q Consensus 80 v~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~ 117 (151)
|+.+|.||+++|.++|+|+++|++||.+|++||.+|+.
T Consensus 98 v~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 98 VYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp BCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999999874
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=7.5e-43 Score=251.89 Aligned_cols=124 Identities=22% Similarity=0.362 Sum_probs=115.8
Q ss_pred chHHHHHHHHHHhhhCCCCC-EEEEe-CCCC--CcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccc
Q psy3497 3 ALPRRIIKETQRLMQEPVPG-ISAVP-DESN--ARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHP 78 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~-i~v~~-~~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 78 (151)
.+.+||++|++++++++++| +++.+ .++| +++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||
T Consensus 25 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HP 104 (160)
T 2a4d_A 25 PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMN 104 (160)
T ss_dssp HHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeC
Confidence 36789999999999998888 77887 4554 89999999999999999999999999999999999999999999999
Q ss_pred ccc-CCCcEEeccCC--CCCCccCCHHHHHHHHHHhhc-CCCCCCChhHHHH
Q psy3497 79 NID-RLGRICLDILK--DKWSPALQIRTVLLSIQALLS-APNPDDPLANDVA 126 (151)
Q Consensus 79 nv~-~~G~icl~~l~--~~W~p~~~i~~vl~~i~~ll~-~p~~~~p~n~eaa 126 (151)
||+ .+|.||+++|. ++|+|+++|++||.+|+++|. .||+++|+|.|||
T Consensus 105 NV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 105 GVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 999 59999999997 899999999999999999995 5999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=6.8e-44 Score=252.22 Aligned_cols=128 Identities=23% Similarity=0.383 Sum_probs=115.1
Q ss_pred CCc--hHHHHHHHHHHhhhC-CCCCEEEEeCC-C--CCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeec
Q psy3497 1 MSA--LPRRIIKETQRLMQE-PVPGISAVPDE-S--NARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 1 ms~--~~kRl~~E~~~l~~~-~~~~i~v~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
||. +.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 664 568999999999998 78899998853 3 49999999999999999999999999999999999999999999
Q ss_pred cccccccCC-CcE--EeccCCCCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHH
Q psy3497 75 IYHPNIDRL-GRI--CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELW 129 (151)
Q Consensus 75 i~Hpnv~~~-G~i--cl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~ 129 (151)
+|||||+.+ |.| |++++. +|+|+++|++||.+|+++|.+||+++|+|.+||++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999995 999 898885 899999999999999999999999999999998654
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-42 Score=243.39 Aligned_cols=113 Identities=34% Similarity=0.641 Sum_probs=108.6
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEE--eCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccc--
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAV--PDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIY-- 76 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~--~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 76 (151)
||...+||++|++++++++++||++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 77777999999999999999999965 78899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcEEeccCCCCCCccCCHHHHHHHHHHhhc
Q psy3497 77 HPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLS 113 (151)
Q Consensus 77 Hpnv~~~G~icl~~l~~~W~p~~~i~~vl~~i~~ll~ 113 (151)
||||+.+|.||+++|.++|+|+++|++||.+|++||.
T Consensus 100 HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 100 HPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999984
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=250.39 Aligned_cols=124 Identities=22% Similarity=0.366 Sum_probs=115.8
Q ss_pred chHHHHHHHHHHhhhCCCCC-EEEEe-CCCC--CcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccc
Q psy3497 3 ALPRRIIKETQRLMQEPVPG-ISAVP-DESN--ARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHP 78 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~-i~v~~-~~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 78 (151)
.+.+||++|+++++++++.| +++.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HP 114 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMN 114 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccC
Confidence 36899999999999998888 67777 4554 89999999999999999999999999999999999999999999999
Q ss_pred ccc-CCCcEEeccCC--CCCCccCCHHHHHHHHHHhhcC-CCCCCChhHHHH
Q psy3497 79 NID-RLGRICLDILK--DKWSPALQIRTVLLSIQALLSA-PNPDDPLANDVA 126 (151)
Q Consensus 79 nv~-~~G~icl~~l~--~~W~p~~~i~~vl~~i~~ll~~-p~~~~p~n~eaa 126 (151)
||+ .+|.||+++|. +.|+|+++|++||.+|+++|.+ ||+++|+|.|||
T Consensus 115 NV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 115 GVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 999 69999999997 8999999999999999999975 999999999987
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-39 Score=237.43 Aligned_cols=116 Identities=31% Similarity=0.637 Sum_probs=104.5
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccC
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDR 82 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 82 (151)
.+.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||+|+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCcEEeccC---CCCCCccCCHHHHHHHHHHhhcCCCCCCC
Q psy3497 83 LGRICLDIL---KDKWSPALQIRTVLLSIQALLSAPNPDDP 120 (151)
Q Consensus 83 ~G~icl~~l---~~~W~p~~~i~~vl~~i~~ll~~p~~~~p 120 (151)
+|.||+++| .+.|+|+++|.+||.+|+++|.+|+++..
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 999999999 68999999999999999999999988533
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.6e-40 Score=244.07 Aligned_cols=138 Identities=19% Similarity=0.316 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHhhhCC---CCCEEEEeCCCCCcEEEEEEECC-CCCCCCC-----------cEEEEEEECCCCCCCCCCe
Q psy3497 4 LPRRIIKETQRLMQEP---VPGISAVPDESNARYFHVIVTGP-EDSPFEG-----------GLFKLELFLPEDYPMSAPK 68 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~---~~~i~v~~~~~~~~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~YP~~pP~ 68 (151)
+.+||++|++++++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 5799999999999988 68899999999999999999998 9999998 8999999999999999999
Q ss_pred EEEeeccccc-cccCCCcEEeccCC-CCCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHH
Q psy3497 69 VRFITKIYHP-NIDRLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRK 146 (151)
Q Consensus 69 v~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 146 (151)
|+|.|++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|+... .|.+++.+|.+++++++.+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~ 179 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYN 179 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHH
Confidence 9999999999 69999999999996 799999999999999999999986532 3455677888888888777
Q ss_pred hcc
Q psy3497 147 YAM 149 (151)
Q Consensus 147 ~a~ 149 (151)
.+.
T Consensus 180 ~~~ 182 (186)
T 1zuo_A 180 SIV 182 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=2.1e-29 Score=180.11 Aligned_cols=114 Identities=20% Similarity=0.315 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEeec
Q psy3497 5 PRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGG----------LFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
.+||++|++.+++ ++.+..+|+..|.+++.||+||+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 6899999999999 467778899999999999999999999 999999999999999999999998
Q ss_pred -cccccccCCCcEEeccC-CC---CCCccCCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHC
Q psy3497 75 -IYHPNIDRLGRICLDIL-KD---KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVN 132 (151)
Q Consensus 75 -i~Hpnv~~~G~icl~~l-~~---~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~eaa~~~~~~ 132 (151)
+|||||+.+|+||+|+| .. .|+|.++|.++|.- ....++..|+..+....
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv~~~ 162 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLIQKG 162 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHhh--------ccCchhhhhhHHHHHcC
Confidence 99999999999999999 43 45599999999843 23445667777766543
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=1.5e-20 Score=135.08 Aligned_cols=114 Identities=21% Similarity=0.408 Sum_probs=94.2
Q ss_pred HHHHHHHHHHhhhCCC---CCEEEEeCCCCCcEEEEEEECCCCCCCCCcE---EEEEEECCCCCCCCCCeEEEeec----
Q psy3497 5 PRRIIKETQRLMQEPV---PGISAVPDESNARYFHVIVTGPEDSPFEGGL---FKLELFLPEDYPMSAPKVRFITK---- 74 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~---~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~YP~~pP~v~f~t~---- 74 (151)
.+|..+|+..+.+.-+ +...+...+|...++.+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 3677788877765332 2334455677777788888888889999998 88999999999999999988551
Q ss_pred ------cc-cccccCCCcEEeccCCCCCCc-cCCHHHHHHHHHHhhcCCCCCC
Q psy3497 75 ------IY-HPNIDRLGRICLDILKDKWSP-ALQIRTVLLSIQALLSAPNPDD 119 (151)
Q Consensus 75 ------i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~vl~~i~~ll~~p~~~~ 119 (151)
|+ ||||+++|+||++.|. +|++ +.++.++|.+|+++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 9999999999999995 6998 6799999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.77 E-value=1.7e-20 Score=131.34 Aligned_cols=95 Identities=20% Similarity=0.399 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEeec
Q psy3497 5 PRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGG----------LFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
..||..||+.|.+ +|+-..++-..|...+.||+||+|.|+ .|.+++.||.+||.+||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 5799999999886 344334444579999999999999999 999999999999999999999996
Q ss_pred -cccccccCCCcEEeccCC-CCC---CccCCHHHHH
Q psy3497 75 -IYHPNIDRLGRICLDILK-DKW---SPALQIRTVL 105 (151)
Q Consensus 75 -i~Hpnv~~~G~icl~~l~-~~W---~p~~~i~~vl 105 (151)
.+||+++.+|+||++++. .-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999871 112 2445666554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.57 E-value=4.8e-15 Score=104.74 Aligned_cols=102 Identities=16% Similarity=0.328 Sum_probs=80.0
Q ss_pred HHHHHHHHhhhCCCC-CEEEE---eCCCCCcEEEEEEECCCCCCCCCcEEE--EEEECCCCCCCCCCeEEEeec------
Q psy3497 7 RIIKETQRLMQEPVP-GISAV---PDESNARYFHVIVTGPEDSPFEGGLFK--LELFLPEDYPMSAPKVRFITK------ 74 (151)
Q Consensus 7 Rl~~E~~~l~~~~~~-~i~v~---~~~~~~~~w~~~i~Gp~~tpyegg~f~--~~i~fp~~YP~~pP~v~f~t~------ 74 (151)
+..+|...+.+.-+. ..... -...++..|.++|. .+|+|+.|. +.|.||++||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 345566666543221 11121 23468899999998 689999998 5999999999999999 7766
Q ss_pred cccccccCCCcEEeccCCCCCCc-cCCHHHHHHHHHHhhcC
Q psy3497 75 IYHPNIDRLGRICLDILKDKWSP-ALQIRTVLLSIQALLSA 114 (151)
Q Consensus 75 i~Hpnv~~~G~icl~~l~~~W~p-~~~i~~vl~~i~~ll~~ 114 (151)
..||||+.+|+||++.|.+ |++ ..++.+++..+++.|.+
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhh
Confidence 4899999999999999965 987 77999999999999875
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=0.0044 Score=41.86 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=46.5
Q ss_pred CCchHHHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEee
Q psy3497 1 MSALPRRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
|+....+...|+..|..--+..+.+. .+....+.+.|....+..-+.-.+.+.|.||++||.+||.+...+
T Consensus 8 m~~~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 8 MTDYGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 44455677888888886444445442 223456666666322222234478899999999999999998754
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.017 Score=39.38 Aligned_cols=68 Identities=12% Similarity=0.196 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhCCCCCEEEEeCC------CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEee
Q psy3497 5 PRRIIKETQRLMQEPVPGISAVPDE------SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~~~i~v~~~~------~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
..+-..|+..|..--+..+.+.... +....+.+.|.+..+ .-..-.+.+.+.+|.+||..||.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 3445667777775433344332111 134567788873222 2123478899999999999999998764
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.11 E-value=0.045 Score=36.76 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhCCCCCEEEEeCC--CCCcEEEEEEECCCCCCCC--CcEEEEEEECCCCCCCCCCeEEEeec
Q psy3497 6 RRIIKETQRLMQEPVPGISAVPDE--SNARYFHVIVTGPEDSPFE--GGLFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 6 kRl~~E~~~l~~~~~~~i~v~~~~--~~~~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
.+...|+..|..--+..+.+.... .+...+.+.|..+.+..-+ .-.+.+.|.||.+||..+|.|...+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 457788888876444455543221 2345566666532221111 24788999999999999999987763
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.68 E-value=0.12 Score=37.34 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhhCCCCCEEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCCCc
Q psy3497 6 RRIIKETQRLMQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGR 85 (151)
Q Consensus 6 kRl~~E~~~l~~~~~~~i~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~ 85 (151)
.+|.+|+.++-=+. +.-.+.++...++.+.... |....++|.++.+||.+||.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 36788888884332 2223567888999998433 568999999999999999988654443 1
Q ss_pred EEeccCCCCCCccCCHHHHHHHHHHhhc
Q psy3497 86 ICLDILKDKWSPALQIRTVLLSIQALLS 113 (151)
Q Consensus 86 icl~~l~~~W~p~~~i~~vl~~i~~ll~ 113 (151)
+.-.|++..++.+++...+..+.
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHHH
Confidence 12479998899888877766654
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.40 E-value=0.12 Score=34.59 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhCCCC--CEEE-EeCCCCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEe
Q psy3497 5 PRRIIKETQRLMQEPVP--GISA-VPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFI 72 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~~--~i~v-~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 72 (151)
..+...|+..|..--+. .+.+ .....+...+.+.|.. .+..-..-.+.+.|.+|.+||..||.|...
T Consensus 9 ~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 9 AEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 44566788777743211 3332 2122334678888873 321111247899999999999999998643
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.22 E-value=0.14 Score=34.62 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHhhhCCCCCEEEEeCCC-----CCcEEEEEEECCCCC--CCCCcEEEEEEECCCCCCCCCCeEEEee
Q psy3497 3 ALPRRIIKETQRLMQEPVPGISAVPDES-----NARYFHVIVTGPEDS--PFEGGLFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 3 ~~~kRl~~E~~~l~~~~~~~i~v~~~~~-----~~~~w~~~i~Gp~~t--pyegg~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
....+...|+..|..--+..+.+..... ....+.+.|. +.+. .-..-.+.+.|.||.+||..+|.|...+
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3455667788888754334454422111 1345666665 3221 0012468999999999999999998753
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.73 E-value=0.4 Score=33.30 Aligned_cols=23 Identities=22% Similarity=0.337 Sum_probs=20.8
Q ss_pred EEEEEEECCCCCCCCCCeEEEee
Q psy3497 51 LFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 51 ~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998654
No 63
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=93.61 E-value=0.012 Score=38.92 Aligned_cols=38 Identities=21% Similarity=0.147 Sum_probs=0.0
Q ss_pred hcCCCCCCChhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 112 LSAPNPDDPLANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 112 l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|+-.....|.+.++|++|.+|++.|..+||.|+.-+|.
T Consensus 18 ~~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 18 LKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp --------------------------------------
T ss_pred ccCcccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 33445678999999999999999999999999976663
No 64
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.29 E-value=0.16 Score=35.13 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=20.9
Q ss_pred cEEEEEEECCCCCCCCCCeEEEee
Q psy3497 50 GLFKLELFLPEDYPMSAPKVRFIT 73 (151)
Q Consensus 50 g~f~~~i~fp~~YP~~pP~v~f~t 73 (151)
-.+.+.|.+|.+||..||.+....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368899999999999999998664
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=64.20 E-value=4.3 Score=18.91 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhhhCCCCCE
Q psy3497 5 PRRIIKETQRLMQEPVPGI 23 (151)
Q Consensus 5 ~kRl~~E~~~l~~~~~~~i 23 (151)
..||+-|+..++-+|+.|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 4689999999999998874
No 66
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=42.79 E-value=21 Score=19.42 Aligned_cols=43 Identities=26% Similarity=0.320 Sum_probs=30.8
Q ss_pred HHHHHHhhcCCCCCCC-hhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy3497 105 LLSIQALLSAPNPDDP-LANDVAELWKVNEAEAIRNAKEWTRKYAM 149 (151)
Q Consensus 105 l~~i~~ll~~p~~~~p-~n~eaa~~~~~~~~~f~~~~~~~~~~~a~ 149 (151)
|..|...+.+|+ +| .+-.+-...+.|+..-...++..+.+|+.
T Consensus 3 LqqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 444555555555 34 45566788999999988888888888875
No 67
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=37.40 E-value=95 Score=21.05 Aligned_cols=44 Identities=14% Similarity=0.253 Sum_probs=33.2
Q ss_pred CCcEEE--EEEECCCCCCCCC-cEEEEEEECCCCCCCCCCeEEEeeccc
Q psy3497 31 NARYFH--VIVTGPEDSPFEG-GLFKLELFLPEDYPMSAPKVRFITKIY 76 (151)
Q Consensus 31 ~~~~w~--~~i~Gp~~tpyeg-g~f~~~i~fp~~YP~~pP~v~f~t~i~ 76 (151)
.++.|. +.+.|+.|..... -+=++...+.+.|+ .|...+..+-|
T Consensus 31 ~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 31 PVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred cccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 357998 8999999887653 44478888999987 48887777644
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.44 E-value=35 Score=24.71 Aligned_cols=25 Identities=24% Similarity=0.535 Sum_probs=22.0
Q ss_pred CCcEEEEEEECCCCCCC-----CCCeEEEe
Q psy3497 48 EGGLFKLELFLPEDYPM-----SAPKVRFI 72 (151)
Q Consensus 48 egg~f~~~i~fp~~YP~-----~pP~v~f~ 72 (151)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 78888876
No 69
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=32.77 E-value=1.2e+02 Score=21.26 Aligned_cols=45 Identities=18% Similarity=0.352 Sum_probs=33.2
Q ss_pred CCCcEEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeeccc
Q psy3497 30 SNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIY 76 (151)
Q Consensus 30 ~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 76 (151)
+.-+.|.+-+.|+.+.-...-+=++...+.+.||. |...+..+-|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 45679999999987764444466899999999975 6666665543
No 70
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=27.29 E-value=21 Score=18.80 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=12.3
Q ss_pred CCchHHHHHHHHHHhh
Q psy3497 1 MSALPRRIIKETQRLM 16 (151)
Q Consensus 1 ms~~~kRl~~E~~~l~ 16 (151)
|-+..|||..|++.+.
T Consensus 26 Mv~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 26 LKSKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3356789999998875
No 71
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=27.16 E-value=60 Score=18.73 Aligned_cols=20 Identities=5% Similarity=-0.039 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHCHHHHHHHH
Q psy3497 121 LANDVAELWKVNEAEAIRNA 140 (151)
Q Consensus 121 ~n~eaa~~~~~~~~~f~~~~ 140 (151)
-|++.+++..+|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 47889999999999998765
No 72
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=24.82 E-value=1.6e+02 Score=22.14 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=25.5
Q ss_pred CCcEEEEEEECCCCCCCCCCeEEEeeccccccccCCC--cEEe
Q psy3497 48 EGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLG--RICL 88 (151)
Q Consensus 48 egg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G--~icl 88 (151)
|...|..++.=... .||.+.|....-.+.+|++| -+|.
T Consensus 200 ENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 200 DNCRYFGRVVGGAA---TPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp CSEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCEECT
T ss_pred cCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 33444444443332 69999999998889999875 4664
No 73
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=24.36 E-value=63 Score=19.33 Aligned_cols=21 Identities=5% Similarity=-0.024 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHCHHHHHHHHH
Q psy3497 121 LANDVAELWKVNEAEAIRNAK 141 (151)
Q Consensus 121 ~n~eaa~~~~~~~~~f~~~~~ 141 (151)
-|++.+++..+|+++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 478999999999999998763
No 74
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=23.39 E-value=1.7e+02 Score=19.42 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=18.0
Q ss_pred CCCCCcEEEEEEECCC-C-CCCCCCeEEEe
Q psy3497 45 SPFEGGLFKLELFLPE-D-YPMSAPKVRFI 72 (151)
Q Consensus 45 tpyegg~f~~~i~fp~-~-YP~~pP~v~f~ 72 (151)
+|.+-|.|.+.|.|.+ . -|-+|-+|++.
T Consensus 104 tP~~~G~y~I~Vk~~g~~hI~GSPF~v~V~ 133 (138)
T 2nqc_A 104 TPMAPGNYLIAIKYGGPQHIVGSPFKAKVT 133 (138)
T ss_dssp ECCSCEEEEEEEEESSSCBCTTCSEEEEEE
T ss_pred EcCCCEEEEEEEEECCcccCCCCCeEEEEe
Confidence 4666788999999876 3 34445555544
No 75
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=23.33 E-value=1.3e+02 Score=18.83 Aligned_cols=24 Identities=13% Similarity=0.128 Sum_probs=19.1
Q ss_pred cEEEEEEECCCCCCCCCCeEEEeec
Q psy3497 50 GLFKLELFLPEDYPMSAPKVRFITK 74 (151)
Q Consensus 50 g~f~~~i~fp~~YP~~pP~v~f~t~ 74 (151)
..+...|.|+..|+. +|+|.+.-.
T Consensus 29 R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 29 RELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp EEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred eEEEEEeEeCcccCC-CCEEEEEeE
Confidence 367788999999985 899887544
No 76
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=23.29 E-value=55 Score=15.08 Aligned_cols=13 Identities=31% Similarity=0.414 Sum_probs=9.6
Q ss_pred hHHHHHHHHHHhh
Q psy3497 4 LPRRIIKETQRLM 16 (151)
Q Consensus 4 ~~kRl~~E~~~l~ 16 (151)
.+|.|.+|+++-+
T Consensus 9 lqkkirkelkqrq 21 (26)
T 1m46_B 9 LQKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5788899987543
No 77
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=21.58 E-value=1.3e+02 Score=19.73 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhhhCCCCCEEEEeCCCCC
Q psy3497 4 LPRRIIKETQRLMQEPVPGISAVPDESNA 32 (151)
Q Consensus 4 ~~kRl~~E~~~l~~~~~~~i~v~~~~~~~ 32 (151)
.++.|..||.++.+-+...++++..+...
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~~ 60 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQY 60 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeEE
Confidence 57889999999999999999988776553
No 78
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=20.89 E-value=60 Score=24.05 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=21.4
Q ss_pred CcEEEEEEECCCCCCC-------CCCeEEEe
Q psy3497 49 GGLFKLELFLPEDYPM-------SAPKVRFI 72 (151)
Q Consensus 49 gg~f~~~i~fp~~YP~-------~pP~v~f~ 72 (151)
.|.|.|+-.+|--||. .||.|.|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 4899999999999997 78999886
No 79
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=20.84 E-value=60 Score=24.07 Aligned_cols=25 Identities=20% Similarity=0.581 Sum_probs=21.5
Q ss_pred CCcEEEEEEECCCCCCC-------CCCeEEEe
Q psy3497 48 EGGLFKLELFLPEDYPM-------SAPKVRFI 72 (151)
Q Consensus 48 egg~f~~~i~fp~~YP~-------~pP~v~f~ 72 (151)
+.|.|.|.-.+|--||. .||.|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 34999999999999984 78999886
No 80
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=20.60 E-value=1.9e+02 Score=22.76 Aligned_cols=23 Identities=22% Similarity=0.561 Sum_probs=18.7
Q ss_pred CCCeEEEeeccccccccCCC--cEE
Q psy3497 65 SAPKVRFITKIYHPNIDRLG--RIC 87 (151)
Q Consensus 65 ~pP~v~f~t~i~Hpnv~~~G--~ic 87 (151)
.||.+.|....-.+..|+|| -+|
T Consensus 249 TPPVlqftNt~TTvLLDENGVGpLC 273 (383)
T 1sid_A 249 TPPVLQFTNTLTTVLLDENGVGPLC 273 (383)
T ss_dssp CCCEEEEESSCEEECCCTTSCCCBC
T ss_pred CCCeEEeccceeEEEEcCCCccccc
Confidence 59999999988888888865 355
No 81
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=20.08 E-value=2.5e+02 Score=21.19 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=26.1
Q ss_pred CCCcEEEEEEECCCCCCCCCCeEEEeeccccccccCC--CcEEe
Q psy3497 47 FEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL--GRICL 88 (151)
Q Consensus 47 yegg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~--G~icl 88 (151)
=|...|..++.=.. ..||.+.|....-.+..+++ |-+|.
T Consensus 203 NENtRYFG~~tGG~---~TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 203 NENTRYFGNYTGGT---TTPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp CTTEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCCEES
T ss_pred CcCceeeeeecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 34444444444333 26999999999888888886 45774
No 82
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=20.01 E-value=1.3e+02 Score=17.72 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy3497 119 DPLANDVAELWKVNEAEAIRNAKEWTRKYA 148 (151)
Q Consensus 119 ~p~n~eaa~~~~~~~~~f~~~~~~~~~~~a 148 (151)
+.++.||++...+|-+...+.+-+.+.++|
T Consensus 22 ~~lsddaa~~LA~dvEyr~~eI~qeA~kfm 51 (70)
T 1taf_B 22 GSLSDDAAKELAEDVSIKLKRIVQDAAKFM 51 (70)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999998888887777777765
Done!