BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy35
MPIDLVIDERDSTKPLPELGGTTNGNDGRSNADSASHDGASTPDVGCLPVHLSLWLVWLM
GFPLITAKL

High Scoring Gene Products

Symbol, full name Information P value
hth
homothorax
protein from Drosophila melanogaster 2.4e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy35
        (69 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0001235 - symbol:hth "homothorax" species:7227 "Dr...   164  2.4e-11   1


>FB|FBgn0001235 [details] [associations]
            symbol:hth "homothorax" species:7227 "Drosophila
            melanogaster" [GO:0007422 "peripheral nervous system development"
            evidence=NAS;IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0034504 "protein localization to nucleus" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001654 "eye
            development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;TAS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0007479 "leg disc
            proximal/distal pattern formation" evidence=TAS] [GO:0007420 "brain
            development" evidence=IMP] [GO:0048749 "compound eye development"
            evidence=IMP] [GO:0007432 "salivary gland boundary specification"
            evidence=NAS;TAS] [GO:0010092 "specification of organ identity"
            evidence=TAS] [GO:0009954 "proximal/distal pattern formation"
            evidence=TAS] [GO:0001752 "compound eye photoreceptor fate
            commitment" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007480 "imaginal disc-derived leg
            morphogenesis" evidence=IMP] [GO:0035282 "segmentation"
            evidence=IMP] [GO:0048735 "haltere morphogenesis" evidence=IMP]
            [GO:0007476 "imaginal disc-derived wing morphogenesis"
            evidence=IMP] [GO:0007383 "specification of segmental identity,
            antennal segment" evidence=IMP] [GO:0007380 "specification of
            segmental identity, head" evidence=IMP] [GO:0005667 "transcription
            factor complex" evidence=IPI] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA;IPI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA;IMP]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            [GO:0042659 "regulation of cell fate specification" evidence=IMP]
            [GO:0007525 "somatic muscle development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR008422 InterPro:IPR009057
            Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE014297 GO:GO:0045664 GO:GO:0007420 GO:GO:0003677
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705 GO:GO:0000060
            GO:GO:0007480 GO:GO:0007476 GO:GO:0007383 GO:GO:0007479
            GO:GO:0001752 HSSP:P55347 eggNOG:NOG302919 GO:GO:0007432
            GO:GO:0010092 EMBL:AF026788 EMBL:AF032865 EMBL:AF035825
            EMBL:AF036584 EMBL:BT010238 EMBL:BT024210 EMBL:BT029117
            RefSeq:NP_001014613.2 RefSeq:NP_001027170.1 RefSeq:NP_001163581.1
            RefSeq:NP_001163582.1 RefSeq:NP_476576.1 RefSeq:NP_476577.2
            RefSeq:NP_476578.3 RefSeq:NP_731486.2 UniGene:Dm.2272
            ProteinModelPortal:O46339 SMR:O46339 IntAct:O46339 MINT:MINT-947560
            STRING:O46339 PaxDb:O46339 PRIDE:O46339 EnsemblMetazoa:FBtr0082255
            GeneID:41273 KEGG:dme:Dmel_CG17117 CTD:41273 FlyBase:FBgn0001235
            GeneTree:ENSGT00550000074260 InParanoid:O46339 KO:K16672
            OMA:ADARNAD OrthoDB:EOG459ZXP PhylomeDB:O46339 ChiTaRS:hth
            GenomeRNAi:41273 NextBio:823032 Bgee:O46339 GO:GO:0048735
            Uniprot:O46339
        Length = 487

 Score = 164 (62.8 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 37/46 (80%), Positives = 40/46 (86%)

Query:     1 MPIDLVIDERDSTKPLPELGGTTNGNDGRSNADSASH-DGASTPDV 45
             MPIDLVIDERD+TKP PELG + NG +GRSNADS SH DGASTPDV
Sbjct:   200 MPIDLVIDERDTTKP-PELG-SANG-EGRSNADSTSHTDGASTPDV 242


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.137   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        69   0.00091  102 3  11 22  0.39    29
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  532 (57 KB)
  Total size of DFA:  102 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.08u 0.09s 9.17t   Elapsed:  00:00:18
  Total cpu time:  9.08u 0.09s 9.17t   Elapsed:  00:00:18
  Start:  Thu Aug 15 12:47:32 2013   End:  Thu Aug 15 12:47:50 2013

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