RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy35
         (69 letters)



>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional.
          Length = 728

 Score = 25.0 bits (55), Expect = 3.3
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 29  RSNADSASHDGASTPDVGCLPVHLSLWLVWLMGFPLITAKL 69
           R+ AD+ +H      D+ C P +L     W+MG  L+ A L
Sbjct: 383 RAAADAWAHLDIRKGDIVCWPTNLG----WMMGPWLVYASL 419


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.316    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0692    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 3,462,489
Number of extensions: 232315
Number of successful extensions: 186
Number of sequences better than 10.0: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 1
Length of query: 69
Length of database: 10,937,602
Length adjustment: 39
Effective length of query: 30
Effective length of database: 9,207,796
Effective search space: 276233880
Effective search space used: 276233880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 53 (24.3 bits)