BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3509
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MYO2 PE=1 SV=1
Length = 1574
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 13 ERRLKEFQVEIE--RRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERR 70
+R+LK+ + + + LKE ++E ++ E + ++KE + E+ R+KE QV++E
Sbjct: 920 QRKLKQLKADAKSVNHLKEVSYKLENKVIELTQNLASKVKENK-EMTERIKELQVQVEES 978
Query: 71 LKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE 128
K Q +E KE ++I+ + K +E+++ ++ E+ LK+ Q+E+E +K+
Sbjct: 979 AK-LQETLENMKKEHLIDIDNQ-KSKDMELQKTIENNLQSTEQTLKDAQLELEDMVKQ 1034
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 8 CQVEIER---RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ 64
VEIE RL E+ + E +E+ + +KE +VEIE K I LK+ +
Sbjct: 269 IDVEIENLKLRLNNIINELNEKGNEEVLELHKSIKELEVEIENDKKVLDSSI-NELKKVE 327
Query: 65 VEIERRLKEFQVEIERRL---------KEFQV-EIERRLKEFQVEIERRLKEFQVEIE-- 112
VEIE + KE + E ++++ KE Q+ EIE ++K E E RLKE E E
Sbjct: 328 VEIENKKKEIK-ETQKKIIENRDSIIEKEQQIKEIEEKIKNLNYEKE-RLKEAIAESESI 385
Query: 113 -RRLKEFQVEIERRLKEFQVEIERRLKELRS 142
+ LKE ++EI + + Q E+ R KEL
Sbjct: 386 IKHLKESEMEIADEIAKNQNELYRLKKELND 416
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
Query: 14 RRLKEFQVEIER---RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERR 70
+++E VEIE RL E+ + E +E+ + +KE +VEIE K I
Sbjct: 264 SKVREIDVEIENLKLRLNNIINELNEKGNEEVLELHKSIKELEVEIENDKKVLDSSI-NE 322
Query: 71 LKEFQVEIERRLKEFQVEIERRL---KEFQVEIERRLKEFQVEIERRLKEFQVEIERRLK 127
LK+ +VEIE + KE + E ++++ ++ +E E+++K EIE ++K E E RLK
Sbjct: 323 LKKVEVEIENKKKEIK-ETQKKIIENRDSIIEKEQQIK----EIEEKIKNLNYEKE-RLK 376
Query: 128 EFQVEIERRLKELRSS 143
E E E +K L+ S
Sbjct: 377 EAIAESESIIKHLKES 392
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 71 LKEFQVEIERRLKEFQVEIERRLKEFQVEIER---RLKEFQVEIERRLKEFQVEIERRLK 127
L+ Q +I + L+E + E +++E VEIE RL E+ + E +E+ + +K
Sbjct: 245 LENIQNDI-KNLEELKNEFLSKVREIDVEIENLKLRLNNIINELNEKGNEEVLELHKSIK 303
Query: 128 EFQVEIERRLKELRSSI 144
E +VEIE K L SSI
Sbjct: 304 ELEVEIENDKKVLDSSI 320
>sp|P06727|APOA4_HUMAN Apolipoprotein A-IV OS=Homo sapiens GN=APOA4 PE=1 SV=3
Length = 396
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 11 EIERRLKEFQVEIERRLKE----FQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVE 66
+++++L F E+ RL + + EI + L+E + + E +I L+E Q
Sbjct: 75 DLQKKLVPFATELHERLAKDSEKLKEEIGKELEELRARLLPHANEVSQKIGDNLRELQQR 134
Query: 67 IERRLKEFQVEIE-------RRLKEFQVEIERRLKE----FQVEIERRLKEFQVEIERRL 115
+E + + ++ R+L + +ER L+E Q + E + +I++ +
Sbjct: 135 LEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNV 194
Query: 116 KEFQVEIERRLKEFQVEIERRLKELRSSI 144
+E + + EF+V+I++ ++ELR S+
Sbjct: 195 EELKGRLTPYADEFKVKIDQTVEELRRSL 223
>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2
Length = 1568
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 25 RRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE 84
LKE ++E ++ E + ++KE + E+ R+KE QV++E K Q +E KE
Sbjct: 936 HHLKEVSYKLENKVIELTQNLASKVKENK-EMTERIKELQVQVEESAK-LQETLENMKKE 993
Query: 85 FQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE 128
V I+ + K +E+++ +++ E+ LK Q+E+E +K+
Sbjct: 994 HLVNIDNQ-KNKDMELQKTIEDNLQSTEQNLKNAQLELEEMVKQ 1036
>sp|P61430|SYCP2_ARATH Synaptonemal complex protein 2 OS=Arabidopsis thaliana GN=ZYP1B
PE=2 SV=1
Length = 856
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 3 IKGKHCQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE----FQVEIER 58
IK K E +L E + + + L+ Q+E+ R LKE ++ + E + VE
Sbjct: 517 IKDKELLATAETKLAEAKKQYDLMLESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHE 576
Query: 59 RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEF 118
+ + ++E+ +KE + ++ L + + E +R+L Q E R+ + E E +
Sbjct: 577 IINSEKDKVEKIIKELSTKYDKGLSDCKEESKRQLLTIQEEHSSRILNIREEHESKELNL 636
Query: 119 QVEIERRLKEFQVEIERRLKELRSSIFSRHE 149
+ + ++ L++ Q++ E LKE +++ S H+
Sbjct: 637 KAKYDQELRQNQIQAENELKERITALKSEHD 667
>sp|Q9NJA9|MYSP_ANISI Paramyosin OS=Anisakis simplex GN=PARA PE=1 SV=1
Length = 869
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 16 LKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ 75
L++ ++E+ERRL+E + E+E K Q EI+ RL + E R+K EI R K++Q
Sbjct: 491 LQQVRIEMERRLQEKEEEMEALRKSMQFEID-RLTAALADAEARMK---AEIARLRKKYQ 546
Query: 76 VEIE------RRLKEFQVEIERRLKEFQ---VEIERRLKEFQVEIERRLKEFQVEIERRL 126
EI L +E ++ +K+ ++++ L++ Q ++++ L ++ + +R++
Sbjct: 547 AEIAELEMTVDNLNRANLEAQKTIKKQSEQIIQLQANLEDTQRQLQQTLDQYAL-AQRKI 605
Query: 127 KEFQVEIERRLKELRSSIFSR 147
E+E L ++I +R
Sbjct: 606 SALSAELEECKTALDNAIRAR 626
>sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2
Length = 1668
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 8 CQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIER---RLKEFQ 64
C++EI+++L + +RRL+ + + E +L + ++ ++++ Q+E +R L +
Sbjct: 642 CEIEIKQKLIDELENSQRRLQTLKHQYEEKL----ILLQNKIRDTQLERDRVLQNLSTME 697
Query: 65 VEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIER 124
E + + + + E+RL+E +++ +L+ Q E R LK Q ER LK+ Q E+
Sbjct: 698 CYTEEKANKIKADYEKRLREMNRDLQ-KLQAAQKEHARLLKN-QSRYERELKKLQAEVA- 754
Query: 125 RLKEFQVEIERRLKE 139
+K+ +V + ++++E
Sbjct: 755 EMKKAKVALMKQMRE 769
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 12 IERRLKEFQVEIER---RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIE 68
++ ++++ Q+E +R L + E + + + + E+RL+E ++++ L+ Q E
Sbjct: 675 LQNKIRDTQLERDRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQK-LQAAQKEHA 733
Query: 69 RRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ-----VEIERRLKEFQVEIE 123
R LK Q ER LK+ Q E+ +K+ +V + ++++E Q VE +R + Q++ E
Sbjct: 734 RLLKN-QSRYERELKKLQAEVAE-MKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKE 791
Query: 124 RRLKEFQV 131
+R +EFQ+
Sbjct: 792 QRRQEFQI 799
>sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2
Length = 1637
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 8 CQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIER---RLKEFQ 64
C++EI+++L + +RRL+ + + E +L + ++ ++++ Q+E +R L +
Sbjct: 641 CEIEIKQKLIDELENSQRRLQTLKHQYEEKL----ILLQNKIRDTQLERDRVLQNLSTME 696
Query: 65 VEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIER 124
E + + + + E+RL+E +++ +L+ Q E R LK Q ER LK+ Q E+
Sbjct: 697 CYTEEKANKIKADYEKRLREMNRDLQ-KLQAAQKEHARLLKN-QSRYERELKKLQAEVA- 753
Query: 125 RLKEFQVEIERRLKE 139
+K+ +V + ++++E
Sbjct: 754 EMKKAKVALMKQMRE 768
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 12 IERRLKEFQVEIER---RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIE 68
++ ++++ Q+E +R L + E + + + + E+RL+E ++++ L+ Q E
Sbjct: 674 LQNKIRDTQLERDRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQK-LQAAQKEHA 732
Query: 69 RRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ-----VEIERRLKEFQVEIE 123
R LK Q ER LK+ Q E+ +K+ +V + ++++E Q VE +R + Q++ E
Sbjct: 733 RLLKN-QSRYERELKKLQAEVAE-MKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKE 790
Query: 124 RRLKEFQV 131
+R +EFQ+
Sbjct: 791 QRRQEFQI 798
>sp|Q28758|APOA4_PAPAN Apolipoprotein A-IV (Fragment) OS=Papio anubis GN=APOA4 PE=2 SV=1
Length = 401
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 11 EIERRLKEFQVEIERRL------------KEFQVEIERRLKEFQVEIERRLKEFQVEIER 58
+++++L F E+ RL KE + E+ RL E+ +++ E E+++
Sbjct: 59 DLQKKLVPFATELHERLAKDSKKLKEEIRKELE-EVRARLLPHANEVSQKIGENVRELQQ 117
Query: 59 RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE----FQVEIERRLKEFQVEIERR 114
RL+ + ++ ++ ++ R+L + +ER L+E Q + + + +I++
Sbjct: 118 RLEPYTDQLRTQVNTQTEQLRRQLTPYAQRMERVLRENADSLQTSLRPHADQLKAKIDQN 177
Query: 115 LKEFQVEIERRLKEFQVEIERRLKELRSSI 144
++E + + EF+V+I++ ++ELR S+
Sbjct: 178 VEELKGRLTPYADEFKVKIDQTVEELRRSL 207
>sp|O46409|APOA4_PIG Apolipoprotein A-IV OS=Sus scrofa GN=APOA4 PE=2 SV=1
Length = 382
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 22 EIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERR 81
+++++L F E+ RL + +++ ++ E+ RL E+ +++ + E+++R
Sbjct: 75 DLQKKLVPFATELHERLTKDSEKLKEEIRRELEELRARLLPHATEVSQKIGDNVRELQQR 134
Query: 82 LKEFQVEIERRLKEFQVEIERRLKEFQVEIE----RRLKEFQVEIERRLKEFQVEIERRL 137
L F + ++ +++R+LK + +E + ++ + + EF+ +I++ +
Sbjct: 135 LGPFTGGLRTQVNTQVQQLQRQLKPYAERMESVLRQNIRNLEASVAPYADEFKAKIDQNV 194
Query: 138 KELRSSIFSRHEKL 151
+EL+ S+ E+L
Sbjct: 195 EELKGSLTPYAEEL 208
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 11 EIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERR 70
+++++L F E+ RL + +++ ++ E+ RL E+ +++ + E+++R
Sbjct: 75 DLQKKLVPFATELHERLTKDSEKLKEEIRRELEELRARLLPHATEVSQKIGDNVRELQQR 134
Query: 71 LKEF----------QVE-IERRLKEFQVEIE----RRLKEFQVEIERRLKEFQVEIERRL 115
L F QV+ ++R+LK + +E + ++ + + EF+ +I++ +
Sbjct: 135 LGPFTGGLRTQVNTQVQQLQRQLKPYAERMESVLRQNIRNLEASVAPYADEFKAKIDQNV 194
Query: 116 KEFQVEIERRLKEFQVEIERRLKELRSSI 144
+E + + +E + +I++ ++ELR S+
Sbjct: 195 EELKGSLTPYAEELKAKIDQNVEELRRSL 223
>sp|Q02171|MYSP_ONCVO Paramyosin OS=Onchocerca volvulus PE=2 SV=1
Length = 879
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 16/129 (12%)
Query: 16 LKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ 75
L++ ++E+ERRL+E + E+E K Q EI+ RL + E R+K EI R K++Q
Sbjct: 497 LQQLRIEMERRLQEKEEEMEALRKNMQFEID-RLTAALADAEARMK---AEIARLKKKYQ 552
Query: 76 VEIE------RRLKEFQVEIERRLK----EFQVEIERRLKEFQVEIERRLKEFQVEIERR 125
EI L +E ++ +K + +V ++ L++ Q ++++ L ++ + +R+
Sbjct: 553 AEIAELEMTVDNLNRANIEAQKTIKKQSEQLKV-LQASLEDTQRQLQQTLDQYAL-AQRK 610
Query: 126 LKEFQVEIE 134
+ E+E
Sbjct: 611 VSALSAELE 619
>sp|Q01202|MYSP_BRUMA Paramyosin OS=Brugia malayi PE=2 SV=2
Length = 880
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 16/129 (12%)
Query: 16 LKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ 75
L++ ++E+ERRL+E + E+E K Q EI+ RL + E R+K EI R K++Q
Sbjct: 497 LQQLRIEMERRLQEKEEEMEALRKNMQFEID-RLTAALADAEARMK---AEISRLKKKYQ 552
Query: 76 VEIE------RRLKEFQVEIERRLKEFQVE----IERRLKEFQVEIERRLKEFQVEIERR 125
EI L +E ++ +K+ Q E ++ L++ Q ++++ L ++ + +R+
Sbjct: 553 AEIAELEMTVDNLNRANIEAQKTIKK-QSEQLKILQASLEDTQRQLQQTLDQYAL-AQRK 610
Query: 126 LKEFQVEIE 134
+ E+E
Sbjct: 611 VSALSAELE 619
>sp|P33621|APOA4_MACFA Apolipoprotein A-IV OS=Macaca fascicularis GN=APOA4 PE=2 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 11 EIERRLKEFQVEIERRL------------KEFQVEIERRLKEFQVEIERRLKEFQVEIER 58
+++++L F E+ RL KE + E+ RL E+ +++ E E+++
Sbjct: 75 DLQKKLVPFATELHERLAKDSEKLKEEIRKELE-EVRARLLPHANEVSQKIGENVRELQQ 133
Query: 59 RLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKE----FQVEIERRLKEFQVEIERR 114
RL+ + ++ ++ ++ R+L + +ER L+E Q + + + +I++
Sbjct: 134 RLEPYTDQLRTQVNTQTEQLRRQLTPYAQRMERVLRENADSLQTSLRPHADQLKAKIDQN 193
Query: 115 LKEFQVEIERRLKEFQVEIERRLKELRSSI 144
++E + + EF+V+I++ ++ELR S+
Sbjct: 194 VEELKERLTPYADEFKVKIDQTVEELRRSL 223
>sp|P13392|MYSP_DIRIM Paramyosin (Fragment) OS=Dirofilaria immitis PE=2 SV=2
Length = 848
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 16 LKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ 75
L++ ++E+ERRL+E + E+E K Q EI+ RL + E R+K EI R K++Q
Sbjct: 470 LQQLRIEMERRLQEKEEEMEALRKNMQFEID-RLTAALADAEARMK---AEISRLKKKYQ 525
Query: 76 VEI 78
EI
Sbjct: 526 AEI 528
>sp|B1H2P5|CE120_XENTR Centrosomal protein of 120 kDa OS=Xenopus tropicalis GN=cep120 PE=2
SV=1
Length = 882
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 78/126 (61%), Gaps = 16/126 (12%)
Query: 22 EIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERR 81
E +RR KE + +++++ E+ V +E +L++ ++E+R ER+L ++E+++
Sbjct: 700 EWKRRDKEREALVKKKVAEYTV-LEEQLQKALADLEKR--------ERQLANDEMELKKL 750
Query: 82 LKEFQVEIERRLKEFQVEIERRLKE---FQVEIERRLKEFQVEIER-RLKEFQVEIERRL 137
+ Q++ ER ++E Q I RR++E Q+E+ER K Q+E ++ RL++ QVE+ER+L
Sbjct: 751 KAQMQLDCERSIQERQDSI-RRVREDCMHQIELERS-KAKQLEEDKLRLQQ-QVELERKL 807
Query: 138 KELRSS 143
+ S
Sbjct: 808 ESTTKS 813
>sp|P10567|MYSP_CAEEL Paramyosin OS=Caenorhabditis elegans GN=unc-15 PE=1 SV=1
Length = 882
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 50 KEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQVEIERRLKEFQ- 108
KE + R+L E +E R E + E++ LKE + +RR E + + R L E Q
Sbjct: 456 KEALADANRKLHELDLENARLAGEIR-ELQTALKE--ADAQRRDAENRAQ--RALAELQA 510
Query: 109 --VEIERRLKEFQVEIERRLKEFQVEIERRLKELRSS 143
+E+ERRL+E + E+E K Q EI+R + L +
Sbjct: 511 LRIEMERRLQEKEEEMEALRKNLQFEIDRLIAALADA 547
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,639,897
Number of Sequences: 539616
Number of extensions: 2160765
Number of successful extensions: 34173
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 1207
Number of HSP's that attempted gapping in prelim test: 21583
Number of HSP's gapped (non-prelim): 6374
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)