Query psy351
Match_columns 146
No_of_seqs 150 out of 1208
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 18:30:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 99.9 1.4E-24 4.7E-29 186.8 8.9 115 29-145 4-119 (554)
2 3d2f_A Heat shock protein homo 99.9 2.3E-24 7.7E-29 189.4 9.8 114 29-145 2-118 (675)
3 4b9q_A Chaperone protein DNAK; 99.9 1.1E-23 3.8E-28 182.8 10.6 113 29-145 2-115 (605)
4 3i33_A Heat shock-related 70 k 99.9 2.7E-23 9.3E-28 170.7 9.9 117 27-145 21-138 (404)
5 2kho_A Heat shock protein 70; 99.9 4.2E-23 1.4E-27 179.2 9.2 112 30-145 3-115 (605)
6 3qfu_A 78 kDa glucose-regulate 99.9 2.6E-22 8.7E-27 163.9 9.4 115 29-145 18-133 (394)
7 1dkg_D Molecular chaperone DNA 99.9 1.6E-21 5.5E-26 159.1 10.0 112 30-145 3-115 (383)
8 4gni_A Putative heat shock pro 99.8 1.6E-19 5.5E-24 148.7 10.8 113 27-145 11-130 (409)
9 2v7y_A Chaperone protein DNAK; 99.7 2E-16 7E-21 134.4 9.1 75 29-105 2-76 (509)
10 1jce_A ROD shape-determining p 98.5 1.1E-07 3.9E-12 76.0 4.9 55 29-93 3-60 (344)
11 4ehu_A Activator of 2-hydroxyi 96.4 0.0022 7.6E-08 49.4 3.7 21 29-49 1-21 (276)
12 2ych_A Competence protein PILM 96.1 0.00024 8.1E-09 57.2 -3.6 39 27-68 11-49 (377)
13 1k8k_A ARP3, actin-like protei 95.6 0.0057 2E-07 49.9 2.8 48 28-84 4-69 (418)
14 2fxu_A Alpha-actin-1, actin, a 95.6 0.0053 1.8E-07 49.5 2.4 57 28-84 4-61 (375)
15 2fsj_A Hypothetical protein TA 94.8 0.006 2E-07 49.0 0.5 21 25-45 17-37 (346)
16 2zgy_A Plasmid segregation pro 93.7 0.1 3.5E-06 40.9 5.5 19 31-49 2-20 (320)
17 1k8k_B ARP2, actin-like protei 92.1 0.027 9.2E-07 45.8 0.0 55 29-84 6-64 (394)
18 1hux_A Activator of (R)-2-hydr 89.1 0.32 1.1E-05 37.5 3.6 21 29-49 3-23 (270)
19 3ezw_A Glycerol kinase; glycer 88.5 0.43 1.5E-05 40.2 4.3 22 28-49 3-24 (526)
20 3g25_A Glycerol kinase; IDP007 87.6 0.47 1.6E-05 39.6 4.0 23 27-49 4-26 (501)
21 3h6e_A Carbohydrate kinase, FG 86.9 0.41 1.4E-05 40.1 3.3 22 28-49 5-26 (482)
22 3l0q_A Xylulose kinase; xlylul 86.7 0.56 1.9E-05 39.7 4.0 22 28-49 4-25 (554)
23 3i8b_A Xylulose kinase; strain 86.6 0.62 2.1E-05 39.3 4.2 20 28-47 4-23 (515)
24 2w40_A Glycerol kinase, putati 86.4 0.53 1.8E-05 39.3 3.7 20 30-49 5-24 (503)
25 3h3n_X Glycerol kinase; ATP-bi 86.3 0.65 2.2E-05 38.9 4.2 22 28-49 4-25 (506)
26 2p3r_A Glycerol kinase; glycer 86.3 0.59 2E-05 39.2 3.9 22 28-49 2-23 (510)
27 3ifr_A Carbohydrate kinase, FG 86.1 0.55 1.9E-05 39.4 3.6 21 29-49 7-27 (508)
28 1vhx_A Putative holliday junct 85.9 0.54 1.9E-05 33.4 3.0 21 29-49 3-23 (150)
29 3ll3_A Gluconate kinase; xylul 85.6 0.63 2.1E-05 39.0 3.7 21 29-49 4-24 (504)
30 4bc3_A Xylulose kinase; transf 85.5 0.69 2.4E-05 39.1 4.0 22 28-49 9-30 (538)
31 4e1j_A Glycerol kinase; struct 85.2 0.88 3E-05 38.3 4.5 21 29-49 26-46 (520)
32 3jvp_A Ribulokinase; PSI-II, N 85.1 0.71 2.4E-05 39.3 3.9 21 28-48 4-24 (572)
33 2zf5_O Glycerol kinase; hypert 84.7 0.78 2.7E-05 38.2 3.9 21 29-49 3-23 (497)
34 3hz6_A Xylulokinase; xylulose, 84.7 0.76 2.6E-05 38.5 3.8 21 29-49 5-25 (511)
35 1hjr_A Holliday junction resol 84.4 1.1 3.8E-05 32.1 4.1 27 29-55 1-28 (158)
36 2dpn_A Glycerol kinase; thermu 84.3 0.78 2.7E-05 38.2 3.7 20 30-49 3-22 (495)
37 1iv0_A Hypothetical protein; r 84.3 0.85 2.9E-05 30.2 3.2 21 29-49 1-21 (98)
38 2uyt_A Rhamnulokinase; rhamnos 84.2 0.63 2.1E-05 38.6 3.0 20 29-48 4-23 (489)
39 3djc_A Type III pantothenate k 84.0 0.82 2.8E-05 35.5 3.4 20 30-49 3-22 (266)
40 3qb0_A Actin-related protein 4 82.8 1 3.5E-05 38.1 3.8 46 27-81 21-70 (498)
41 2itm_A Xylulose kinase, xylulo 82.7 0.99 3.4E-05 37.4 3.7 19 31-49 2-20 (484)
42 2d4w_A Glycerol kinase; alpha 81.6 1.2 4.1E-05 37.2 3.8 20 30-49 3-22 (504)
43 3bex_A Type III pantothenate k 79.9 1.4 4.7E-05 33.7 3.4 22 28-49 2-23 (249)
44 3h1q_A Ethanolamine utilizatio 78.9 1.7 5.9E-05 32.6 3.6 21 29-49 28-48 (272)
45 2ews_A Pantothenate kinase; PA 77.9 1.6 5.4E-05 34.3 3.2 23 27-49 18-40 (287)
46 1nu0_A Hypothetical protein YQ 77.8 2.2 7.6E-05 29.8 3.6 21 29-49 3-23 (138)
47 3nuw_A 2-OXO-3-deoxygalactonat 76.7 3.3 0.00011 32.7 4.7 23 27-49 4-26 (295)
48 2e2o_A Hexokinase; acetate and 75.4 2.7 9.3E-05 32.1 3.9 20 30-49 3-22 (299)
49 4ep4_A Crossover junction endo 75.1 2.4 8.3E-05 30.7 3.3 21 29-49 1-21 (166)
50 3vov_A Glucokinase, hexokinase 74.9 2.3 7.7E-05 32.9 3.3 21 29-49 1-21 (302)
51 1zc6_A Probable N-acetylglucos 73.2 3.5 0.00012 31.7 4.1 20 30-49 12-31 (305)
52 4htl_A Beta-glucoside kinase; 73.0 3.2 0.00011 31.9 3.8 22 28-49 3-24 (297)
53 2ch5_A NAGK protein; transfera 72.9 3.7 0.00013 31.9 4.2 21 29-49 6-26 (347)
54 2h3g_X Biosynthetic protein; p 72.0 3.1 0.00011 32.2 3.4 19 31-49 2-20 (268)
55 4apw_A ALP12; actin-like prote 71.0 0.86 2.9E-05 36.0 0.0 54 28-82 6-73 (329)
56 1zbs_A Hypothetical protein PG 70.6 3.1 0.00011 31.8 3.2 19 31-49 2-20 (291)
57 3epq_A Putative fructokinase; 69.1 4.4 0.00015 31.4 3.8 22 28-49 2-23 (302)
58 3vgl_A Glucokinase; ROK family 68.7 4.1 0.00014 31.6 3.6 21 29-49 2-22 (321)
59 1bdg_A Hexokinase; phosphotran 68.5 3.4 0.00012 34.3 3.2 22 28-49 67-88 (451)
60 2qm1_A Glucokinase; alpha-beta 67.7 5.2 0.00018 30.7 3.9 21 29-49 6-26 (326)
61 2f9w_A Pantothenate kinase; CO 66.2 5.1 0.00017 31.1 3.6 22 28-49 22-44 (271)
62 1sz2_A Glucokinase, glucose ki 65.7 3.6 0.00012 32.1 2.7 22 26-47 11-32 (332)
63 1zxo_A Conserved hypothetical 65.5 2.9 9.9E-05 32.0 2.1 19 31-49 2-20 (291)
64 2yhx_A Hexokinase B; transfera 65.0 4.2 0.00014 33.9 3.0 21 28-48 60-80 (457)
65 3t69_A Putative 2-dehydro-3-de 63.8 6.4 0.00022 31.6 3.8 22 28-49 6-27 (330)
66 2aa4_A Mannac kinase, putative 63.1 6.9 0.00024 29.5 3.8 21 29-49 1-21 (289)
67 2gup_A ROK family protein; sug 62.1 5.9 0.0002 30.0 3.2 21 29-49 4-24 (292)
68 1woq_A Inorganic polyphosphate 61.4 6.4 0.00022 29.6 3.3 20 29-48 12-31 (267)
69 2yhw_A Bifunctional UDP-N-acet 61.2 7 0.00024 30.4 3.6 22 28-49 29-50 (343)
70 4db3_A Glcnac kinase, N-acetyl 59.7 9 0.00031 29.8 4.0 24 26-49 21-44 (327)
71 3o8m_A Hexokinase; rnaseh-like 58.3 5.7 0.0002 33.4 2.7 20 29-48 80-99 (485)
72 2ap1_A Putative regulator prot 58.3 9.9 0.00034 29.3 4.0 23 27-49 22-44 (327)
73 3r8e_A Hypothetical sugar kina 58.0 9.7 0.00033 29.5 3.9 22 28-49 18-39 (321)
74 3htv_A D-allose kinase, alloki 57.3 9.1 0.00031 29.6 3.6 21 29-49 7-27 (310)
75 2q2r_A Glucokinase 1, putative 55.5 9 0.00031 30.3 3.4 21 28-48 28-48 (373)
76 1saz_A Probable butyrate kinas 54.2 11 0.00036 30.3 3.6 21 29-49 2-22 (381)
77 1cza_N Hexokinase type I; stru 54.1 8.2 0.00028 34.9 3.2 22 28-49 77-98 (917)
78 1cza_N Hexokinase type I; stru 50.9 10 0.00034 34.3 3.2 21 28-48 525-545 (917)
79 2hoe_A N-acetylglucosamine kin 50.5 15 0.0005 29.2 3.9 21 29-49 87-107 (380)
80 1z6r_A MLC protein; transcript 49.5 12 0.00043 29.8 3.3 22 28-49 84-105 (406)
81 3hm8_A Hexokinase-3; glucose, 47.5 13 0.00045 31.0 3.2 26 28-53 58-83 (445)
82 4a2a_A Cell division protein F 47.0 15 0.00052 29.9 3.5 20 28-47 7-26 (419)
83 3cet_A Conserved archaeal prot 46.4 14 0.00048 29.7 3.1 20 30-49 1-20 (334)
84 2ivn_A O-sialoglycoprotein end 46.3 16 0.00053 28.7 3.4 21 29-49 1-21 (330)
85 3f9m_A Glucokinase; hexokinase 45.0 14 0.00049 30.9 3.1 20 28-47 76-95 (470)
86 3js6_A Uncharacterized PARM pr 42.9 35 0.0012 27.0 5.0 16 28-43 3-18 (355)
87 1z05_A Transcriptional regulat 42.6 17 0.00056 29.4 3.0 21 29-49 108-128 (429)
88 1nbw_A Glycerol dehydratase re 42.5 17 0.0006 31.4 3.2 18 30-47 3-20 (607)
89 3mcp_A Glucokinase; structural 41.4 23 0.00078 28.4 3.7 22 28-49 8-29 (366)
90 3lm2_A Putative kinase; struct 34.2 24 0.00084 26.2 2.6 16 28-43 5-20 (226)
91 1kcf_A Hypothetical 30.2 KD pr 31.9 36 0.0012 26.1 3.3 20 29-48 40-59 (258)
92 3zyy_X Iron-sulfur cluster bin 31.4 37 0.0013 29.5 3.5 20 29-48 206-225 (631)
93 2ja9_A Exosome complex exonucl 28.2 53 0.0018 23.6 3.4 38 95-135 101-138 (175)
94 3dwl_A Actin-related protein 3 26.5 19 0.00065 29.4 0.8 22 28-49 4-25 (427)
95 2nn6_G Exosome complex exonucl 22.0 55 0.0019 25.5 2.7 37 95-135 220-256 (289)
96 4dkw_A Large terminase protein 21.4 60 0.0021 23.8 2.7 15 29-43 27-41 (211)
97 2nrh_A Transcriptional activat 20.4 40 0.0014 25.1 1.5 17 31-49 3-19 (219)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.91 E-value=1.4e-24 Score=186.77 Aligned_cols=115 Identities=26% Similarity=0.396 Sum_probs=100.0
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCCChh
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 108 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~~ 108 (146)
+.+||||||||||+||++.+| +++++.|++|++++||+|+|.++++++|.+|++++.++|.++++++||+||++++|+.
T Consensus 4 ~~~iGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp CCCEEEEECSSEEEEEEECSS-SEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCEEEEEeCcccEEEEEEECC-EEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 468999999999999999988 9999999999999999999988899999999999999999999999999999999999
Q ss_pred hhhhccCcceEEeecCCCCceEEEEc-CCcEEEeeeee
Q psy351 109 VQLFKSRFPYYDIVADEERGTIVFKT-NDNELYHVEEL 145 (146)
Q Consensus 109 v~~~~~~~p~~~v~~d~~~g~~~~~~-~~~~~~speev 145 (146)
++...+++||.++..++ ...+.+.. ++.+.|+||||
T Consensus 83 v~~~~~~~p~~v~~~~g-~~~~~v~~~~~~~~~sp~ei 119 (554)
T 1yuw_A 83 VQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEV 119 (554)
T ss_dssp HHHHHTTCSSEEEEETT-EEEEEEEETTEEEEECHHHH
T ss_pred HHHHhhcCCeEEEecCC-ceEEEEEECCCceEEcHHHH
Confidence 99999999998764332 22222322 34578999987
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.90 E-value=2.3e-24 Score=189.42 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=101.0
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCCChh
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 108 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~~ 108 (146)
|.+||||||||||+||++.+| +++++.|++|+|.+||+|+|.++++++|..|++++.++|.++++++||+||++++|+.
T Consensus 2 m~~iGIDlGTtns~va~~~~g-~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNR-GIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETT-EEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECC-eeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 568999999999999999998 8999999999999999999988899999999999999999999999999999999999
Q ss_pred hhhhccCcceEEeecCCCCceEEEEc---CCcEEEeeeee
Q psy351 109 VQLFKSRFPYYDIVADEERGTIVFKT---NDNELYHVEEL 145 (146)
Q Consensus 109 v~~~~~~~p~~~v~~d~~~g~~~~~~---~~~~~~speev 145 (146)
+|.+.+++||+++.. .+|.+.+.. ++.+.|+||||
T Consensus 81 v~~~~~~~p~~v~~~--~~g~~~~~~~~~g~~~~~speei 118 (675)
T 3d2f_A 81 FEQESKHFTSKLVEL--DDKKTGAEVRFAGEKHVFSATQL 118 (675)
T ss_dssp HHHHHTTCCSEEEEC--TTSBEEEEEEETTEEEEEEHHHH
T ss_pred HHHHHhhCCeeEEEc--CCCceEEEEEeCCCCceEcHHHH
Confidence 999999999987542 245555432 44578999987
No 3
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.90 E-value=1.1e-23 Score=182.78 Aligned_cols=113 Identities=23% Similarity=0.314 Sum_probs=102.3
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEc-CCeeeecHhHHHhhhcCCCCeeecchhhccCCCCCh
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFH-KGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSP 107 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~-~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~ 107 (146)
+.+||||||||||+||++.+| .++++.|.+|++.+||+|+|. ++++++|..|++++.++|.++++++|||||++++|+
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETT-EEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CcEEEEEcCCCcEEEEEEECC-EEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 468999999999999999988 899999999999999999996 568999999999999999999999999999999999
Q ss_pred hhhhhccCcceEEeecCCCCceEEEEcCCcEEEeeeee
Q psy351 108 VVQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEEL 145 (146)
Q Consensus 108 ~v~~~~~~~p~~~v~~d~~~g~~~~~~~~~~~~speev 145 (146)
.++...+++||+++.. .+|.+.+..+ ++.++|+||
T Consensus 81 ~v~~~~~~~p~~~~~~--~~g~~~~~~~-~~~~~p~ei 115 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAA--DNGDAWVEVK-GQKMAPPQI 115 (605)
T ss_dssp HHHHHHTTCSSEEEEC--TTSBEEEEET-TEEECHHHH
T ss_pred HHHHHhhcCCeEEEEc--CCCceEEEEC-CEEECHHHH
Confidence 9999999999987643 3677777765 479999987
No 4
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.89 E-value=2.7e-23 Score=170.71 Aligned_cols=117 Identities=23% Similarity=0.401 Sum_probs=101.7
Q ss_pred cCCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDS 106 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d 106 (146)
..+.+||||||||||+||++.+| .++++.|+.|++++||+|+|.++++++|..|+.++.++|.++++++||+||++++|
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETT-EEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred ccCCEEEEEcCCccEEEEEEECC-eeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 56789999999999999999988 89999999999999999999888999999999999999999999999999999999
Q ss_pred hhhhhhccCcceEEeecCCCCceEEEEc-CCcEEEeeeee
Q psy351 107 PVVQLFKSRFPYYDIVADEERGTIVFKT-NDNELYHVEEL 145 (146)
Q Consensus 107 ~~v~~~~~~~p~~~v~~d~~~g~~~~~~-~~~~~~speev 145 (146)
+.++...+++||.++..++ ...+.+.. ++.+.++|||+
T Consensus 100 ~~~~~~~~~~p~~~~~~~g-~~~~~v~~~~~~~~~~~~ei 138 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVSEGG-KPKVQVEYKGETKTFFPEEI 138 (404)
T ss_dssp HHHHHHHTTCSSEEEEETT-EEEEEEEETTEEEEECHHHH
T ss_pred HHHHHHHhhCCceEEccCC-ceEEEEEeCCCceEEcHHHH
Confidence 9999999999998776443 33444443 33478999986
No 5
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.88 E-value=4.2e-23 Score=179.19 Aligned_cols=112 Identities=24% Similarity=0.350 Sum_probs=99.3
Q ss_pred cEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEc-CCeeeecHhHHHhhhcCCCCeeecchhhccCCCCChh
Q psy351 30 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFH-KGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 108 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~-~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~~ 108 (146)
.++|||||||||+||++.+| .++++.|++|++.+||+|+|. ++++++|..|++++.++|.++++++||+||++++|+.
T Consensus 3 ~viGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp -CEEEECCSSEEEEEEEETT-EEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CEEEEEcCCcCEEEEEEECC-EEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 58999999999999999988 899999999999999999995 5789999999999999999999999999999999999
Q ss_pred hhhhccCcceEEeecCCCCceEEEEcCCcEEEeeeee
Q psy351 109 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEEL 145 (146)
Q Consensus 109 v~~~~~~~p~~~v~~d~~~g~~~~~~~~~~~~speev 145 (146)
++...+++||.++.. .+|.+.+..+ ++.|+|+||
T Consensus 82 v~~~~~~~p~~~~~~--~~g~~~i~~~-g~~~~~~ei 115 (605)
T 2kho_A 82 VQRDVSIMPFKIIAA--DNGDAWVEVK-GQKMAPPQI 115 (605)
T ss_dssp HHHHHHHCSSCEEEC--TTSBEEEEET-TEEECHHHH
T ss_pred HHHHhhcCCeEEEEC--CCCceEEEEC-CEEEcHHHH
Confidence 999888999987533 2566777664 478999987
No 6
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.87 E-value=2.6e-22 Score=163.85 Aligned_cols=115 Identities=26% Similarity=0.401 Sum_probs=101.0
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCCChh
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 108 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~~ 108 (146)
..++||||||||+++|++.+| .++++.|..|++.+||+|+|.++++++|..|++++.++|.++++++||+||++++|+.
T Consensus 18 ~~viGID~GTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNG-KTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSS-CEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCEEEEEeCcCcEEEEEEECC-eeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 468999999999999999988 8999999999999999999998899999999999999999999999999999999999
Q ss_pred hhhhccCcceEEeecCCCCceEEEEc-CCcEEEeeeee
Q psy351 109 VQLFKSRFPYYDIVADEERGTIVFKT-NDNELYHVEEL 145 (146)
Q Consensus 109 v~~~~~~~p~~~v~~d~~~g~~~~~~-~~~~~~speev 145 (146)
++...+++||.++..++ ...+.+.. ++.+.++|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ei 133 (394)
T 3qfu_A 97 VQKDIKHLPFNVVNKDG-KPAVEVSVKGEKKVFTPEEI 133 (394)
T ss_dssp HHHHHTTCSSEEEEETT-EEEEEEESSSSEEEECHHHH
T ss_pred HHHHhhcCCeEEEcCCC-ceEEEEEeCCCceEEcHHHH
Confidence 99999999998764443 33344443 34578999986
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.85 E-value=1.6e-21 Score=159.14 Aligned_cols=112 Identities=24% Similarity=0.350 Sum_probs=97.9
Q ss_pred cEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEc-CCeeeecHhHHHhhhcCCCCeeecchhhccCCCCChh
Q psy351 30 AVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFH-KGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDSPV 108 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~-~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d~~ 108 (146)
.++||||||||++||++.+| .++++.|++|++++||+|+|. ++++++|.+|++++.++|+++++++||+||++++|+.
T Consensus 3 ~~vGIDlGTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGT-TPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp CCCEEECCSSEEEEEEEETT-EEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred cEEEEEcCCCCEEEEEEECC-eeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 57999999999999999988 889999999999999999995 4688999999999999999999999999999999999
Q ss_pred hhhhccCcceEEeecCCCCceEEEEcCCcEEEeeeee
Q psy351 109 VQLFKSRFPYYDIVADEERGTIVFKTNDNELYHVEEL 145 (146)
Q Consensus 109 v~~~~~~~p~~~v~~d~~~g~~~~~~~~~~~~speev 145 (146)
++...+.+||.++.. .+|...+..+ ++.++|+||
T Consensus 82 ~~~~~~~~p~~~~~~--~~~~~~~~~~-g~~~~~~~i 115 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAA--DNGDAWVEVK-GQKMAPPQI 115 (383)
T ss_dssp HHHHTTTCSSEEEEC--SSSBEEEEET-TEEECHHHH
T ss_pred HHHHhhcCCeEEEEc--CCCcEEEEEC-CEEEcHHHH
Confidence 998888999987533 2455566553 468999986
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.80 E-value=1.6e-19 Score=148.71 Aligned_cols=113 Identities=22% Similarity=0.357 Sum_probs=93.6
Q ss_pred cCCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSIDS 106 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~d 106 (146)
..+.++||||||||++||++.++ +++++.|..|++++||+|+|.++++++|.+|++++.++|.++++++||++|++++|
T Consensus 11 m~~~vvGIDlGTt~s~va~~~~g-~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~ 89 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTVDD-KAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKS 89 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEETT-EEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGG
T ss_pred CCCcEEEEEcCCCeEEEEEEeCC-ceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccc
Confidence 35689999999999999999777 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCcceEEeecCCCCceEEEEcC-------CcEEEeeeee
Q psy351 107 PVVQLFKSRFPYYDIVADEERGTIVFKTN-------DNELYHVEEL 145 (146)
Q Consensus 107 ~~v~~~~~~~p~~~v~~d~~~g~~~~~~~-------~~~~~speev 145 (146)
+.++... .++..... +|.+.+... +++.++|+||
T Consensus 90 ~~~~~~~--~~~~~~~~---~g~~~~~v~~~~~~~~~~~~~~~~ev 130 (409)
T 4gni_A 90 VDPTHNH--ASAHPQEA---GDNVVFTIKDKAEEDAEPSTLTVSEI 130 (409)
T ss_dssp CCCGGGT--TSCCCEEE---TTEEEEEECCSSCSSCCCEEEEHHHH
T ss_pred hhhhhhc--cccceecC---CCcEEEEEecCCCCCCcceEEcHHHH
Confidence 7766543 34433332 455555432 3478999987
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.66 E-value=2e-16 Score=134.44 Aligned_cols=75 Identities=31% Similarity=0.463 Sum_probs=70.4
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCCeeeecHhHHHhhhcCCCCeeecchhhccCCCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGERTFGEDAQIIGTRFPSNSYGYFLDLLGKSID 105 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~~i~~~KrliG~~~~ 105 (146)
+.++|||||||||+||++.+| .++++.|++|++.+||+|+|.++++++|.+|++++.++| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g-~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~ 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGG-EVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETT-EEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC
T ss_pred CCEEEEEcCCceEEEEEEECC-EEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE
Confidence 368999999999999999988 899999999999999999998788999999999999999 999999999999765
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.48 E-value=1.1e-07 Score=75.98 Aligned_cols=55 Identities=24% Similarity=0.349 Sum_probs=42.6
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcCC--e-eeecHhHHHhhhcCCCCee
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKG--E-RTFGEDAQIIGTRFPSNSY 93 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~~--~-~~vG~~A~~~~~~~p~~~i 93 (146)
+.++||||||+|+++++..++ .+.+ +||+|+|.++ + .++|.+|+++..++|.++.
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~----~~~~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~ 60 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG----IVVN------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIK 60 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE----EEEE------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEE
T ss_pred CceEEEEcCcCcEEEEECCCC----EEEe------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeE
Confidence 368999999999999874322 2233 6999999653 3 4799999999999998864
No 11
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.43 E-value=0.0022 Score=49.43 Aligned_cols=21 Identities=33% Similarity=0.471 Sum_probs=19.3
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|||++.+++++++
T Consensus 1 M~~lGID~GsT~tk~av~d~~ 21 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNG 21 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETT
T ss_pred CeEEEEEcCccEEEEEEEECC
Confidence 578999999999999999877
No 12
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.09 E-value=0.00024 Score=57.16 Aligned_cols=39 Identities=21% Similarity=0.360 Sum_probs=27.9
Q ss_pred cCCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEE
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLV 68 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V 68 (146)
....++|||+||++++++..+++ ++++ +..|...+||.+
T Consensus 11 ~~~~~vgiDiGt~~i~~~~~~~~-~~~i--~~~g~~~~ps~~ 49 (377)
T 2ych_A 11 PRVEALGLEIGASALKLVEVSGN-PPAL--KALASRPTPPGL 49 (377)
T ss_dssp CCCCCEEEEECSSEEEEEEEETT-TTEE--EEEEEEECCTTS
T ss_pred CCCceEEEEeCCCeEEEEEEeCC-ceEE--EEEEeEECCCCc
Confidence 34578999999999999998866 6544 234555666643
No 13
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=95.62 E-value=0.0057 Score=49.89 Aligned_cols=48 Identities=17% Similarity=0.249 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcC------------------CeeeecHhHHHh
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHK------------------GERTFGEDAQII 84 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~------------------~~~~vG~~A~~~ 84 (146)
....|+||+||+|+++++..+. .+.. .+||+|+... ...++|.+|...
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~-~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~ 69 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNT-EPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK 69 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCS-SCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC
T ss_pred CCCeEEEECCCCeEEEeeCCCC-CCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc
Confidence 4568999999999999876544 2221 2466665432 237899988765
No 14
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=95.58 E-value=0.0053 Score=49.55 Aligned_cols=57 Identities=16% Similarity=0.249 Sum_probs=31.5
Q ss_pred CCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeE-EEEEcCCeeeecHhHHHh
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPT-LVAFHKGERTFGEDAQII 84 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS-~V~f~~~~~~vG~~A~~~ 84 (146)
....|+||+||+|+++++...+.+.-++++--+....++ .+.+.++..++|.+|+..
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~ 61 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHH
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhc
Confidence 346799999999999988755522223333222222211 122223467899999875
No 15
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=94.82 E-value=0.006 Score=48.99 Aligned_cols=21 Identities=24% Similarity=0.215 Sum_probs=15.4
Q ss_pred cccCCcEEEEEcCCccEEEEE
Q psy351 25 HSYGIAVMSVDLGSEWMKVAI 45 (146)
Q Consensus 25 ~~~~~~~iGIDlGTtns~va~ 45 (146)
.+..|..+|||+||.|++++.
T Consensus 17 ~~~~m~~igiDlG~~~tkv~~ 37 (346)
T 2fsj_A 17 RGSHMVVVGLDVGYGDTKVIG 37 (346)
T ss_dssp ----CEEEEEEECSSEEEEEC
T ss_pred CCceeEEEEEecCCcceeEEe
Confidence 355678899999999999874
No 16
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=93.68 E-value=0.1 Score=40.91 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=16.0
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
++||||||+|+++++..++
T Consensus 2 ~igiD~G~sntK~~~~~~~ 20 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESD 20 (320)
T ss_dssp EEEEEECSSEEEEEEECSS
T ss_pred eEEEecCCccceEEEecCC
Confidence 6899999999999985443
No 17
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=92.13 E-value=0.027 Score=45.83 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=0.0
Q ss_pred CcEEEEEcCCccEEEEEEeCCCceE-EEecCCCCcceeEEE---EEcCCeeeecHhHHHh
Q psy351 29 IAVMSVDLGSEWMKVAIVSPGVPME-IALNKESKRKTPTLV---AFHKGERTFGEDAQII 84 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~~~~~-iv~n~~~~~~~PS~V---~f~~~~~~vG~~A~~~ 84 (146)
...|+||+||.++++++.... .+. ++++--+....++.. .+..+..++|.+|...
T Consensus 6 ~~~ivID~Gs~~~k~G~ag~~-~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 64 (394)
T 1k8k_B 6 RKVVVCDNGTGFVKCGYAGSN-FPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASEL 64 (394)
T ss_dssp ------------------------------------------------------------
T ss_pred CCEEEEECCCCeEEEeeCCCC-CcceeccceeEEEcccccccccCCCCCCeEEChHHHhc
Confidence 467999999999999876554 332 233332332222211 1122456799988764
No 18
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=89.11 E-value=0.32 Score=37.52 Aligned_cols=21 Identities=33% Similarity=0.517 Sum_probs=18.6
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
+..+|||+|+|++++++++..
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~ 23 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDG 23 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeccceEEEEEEeCC
Confidence 468999999999999999864
No 19
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=88.51 E-value=0.43 Score=40.19 Aligned_cols=22 Identities=9% Similarity=0.240 Sum_probs=19.2
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
+..++|||+|||++++.+++..
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTT
T ss_pred ceEEEEEEccccceeeeEEcCC
Confidence 4678999999999999999754
No 20
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=87.57 E-value=0.47 Score=39.65 Aligned_cols=23 Identities=13% Similarity=0.245 Sum_probs=19.5
Q ss_pred cCCcEEEEEcCCccEEEEEEeCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~ 49 (146)
+...++|||+|||++++++++..
T Consensus 4 M~~~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 4 MEKYILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp CCCEEEEEEECSSEEEEEEECTT
T ss_pred cccEEEEEEeCccceEEEEEcCC
Confidence 34578999999999999999754
No 21
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=86.95 E-value=0.41 Score=40.10 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=17.4
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|||++++++++..
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTT
T ss_pred hceEEEEEcCCCCeEEEEEECC
Confidence 3478999999999999999854
No 22
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=86.68 E-value=0.56 Score=39.73 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=19.1
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|||++++++++..
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CcEEEEEEECcccEEEEEECCC
Confidence 3478999999999999999854
No 23
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=86.55 E-value=0.62 Score=39.26 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=18.2
Q ss_pred CCcEEEEEcCCccEEEEEEe
Q psy351 28 GIAVMSVDLGSEWMKVAIVS 47 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~ 47 (146)
...++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 45789999999999999998
No 24
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=86.45 E-value=0.53 Score=39.30 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=18.0
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 58999999999999999855
No 25
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=86.31 E-value=0.65 Score=38.88 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=19.2
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|||++++++++..
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEcCCCceEEEEECCC
Confidence 4578999999999999999854
No 26
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=86.29 E-value=0.59 Score=39.23 Aligned_cols=22 Identities=9% Similarity=0.240 Sum_probs=18.9
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
+..++|||+|||++++++++..
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT
T ss_pred CcEEEEEEcCCcceEEEEECCC
Confidence 3468999999999999999754
No 27
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=86.13 E-value=0.55 Score=39.38 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=18.7
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|||++++++++..
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEecCcceEEEEECCC
Confidence 578999999999999999855
No 28
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=85.87 E-value=0.54 Score=33.43 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=18.8
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|+..+-+|+.++.
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 579999999999999999864
No 29
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=85.59 E-value=0.63 Score=38.99 Aligned_cols=21 Identities=14% Similarity=0.218 Sum_probs=18.5
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|||++++++++..
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEecCCceEEEEEcCC
Confidence 368999999999999999855
No 30
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=85.53 E-value=0.69 Score=39.05 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=19.1
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|||++++.+++..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEEcCcCEEEEEECCC
Confidence 3578999999999999999854
No 31
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=85.25 E-value=0.88 Score=38.29 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=18.5
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|||++++++++..
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred CeEEEEEeCCcceEEEEECCC
Confidence 368999999999999999754
No 32
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=85.14 E-value=0.71 Score=39.31 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=18.3
Q ss_pred CCcEEEEEcCCccEEEEEEeC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~ 48 (146)
...++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 357899999999999999985
No 33
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=84.74 E-value=0.78 Score=38.23 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=18.3
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|||++++++++..
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEecCCchhEEEEECCC
Confidence 368999999999999999754
No 34
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=84.68 E-value=0.76 Score=38.54 Aligned_cols=21 Identities=19% Similarity=0.381 Sum_probs=18.6
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|||++++++++..
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCCCceEEEEECCC
Confidence 478999999999999999754
No 35
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=84.41 E-value=1.1 Score=32.14 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=20.5
Q ss_pred CcEEEEEcCCccEEEEEEe-CCCceEEE
Q psy351 29 IAVMSVDLGSEWMKVAIVS-PGVPMEIA 55 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~-~~~~~~iv 55 (146)
|.++|||.|++++-+++.+ +|++.+.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v 28 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYL 28 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEE
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEE
Confidence 4689999999999999986 34345444
No 36
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=84.29 E-value=0.78 Score=38.21 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=17.9
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 57999999999999999754
No 37
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=84.26 E-value=0.85 Score=30.16 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=18.4
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|+..+-||+.++.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 358999999999999998865
No 38
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=84.17 E-value=0.63 Score=38.59 Aligned_cols=20 Identities=25% Similarity=0.305 Sum_probs=17.5
Q ss_pred CcEEEEEcCCccEEEEEEeC
Q psy351 29 IAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~ 48 (146)
..++|||+|||++++++++.
T Consensus 4 ~~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE
T ss_pred ceEEEEEecCCCceEEEEEe
Confidence 35899999999999999874
No 39
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=83.97 E-value=0.82 Score=35.52 Aligned_cols=20 Identities=10% Similarity=0.353 Sum_probs=18.7
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
+.++||.|+||+++++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp CEEEEEECSSEEEEEEEETT
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 68999999999999999987
No 40
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=82.78 E-value=1 Score=38.09 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=31.9
Q ss_pred cCCcEEEEEcCCccEEEEEEeCCCceEEEecCCCCcceeEEEEEcC----CeeeecHhH
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHK----GERTFGEDA 81 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~~~~~iv~n~~~~~~~PS~V~f~~----~~~~vG~~A 81 (146)
.....|+||+||.++++.+...+ .+. ...||+|+... +..++|.+|
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~-~P~--------~v~PSvVg~~~~~~~~~~~vG~e~ 70 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSD-FPQ--------SILPSVYGKYTADEGNKKIFSEQS 70 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCS-SCS--------EEEESEEEEESSCSSCCEECCTTG
T ss_pred CCCCeEEEECCCcEEEEEECCCC-Cee--------eecCceeEEeccCCCccEEEecHH
Confidence 34568999999999998875444 222 23589988742 356899864
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=82.68 E-value=0.99 Score=37.40 Aligned_cols=19 Identities=26% Similarity=0.515 Sum_probs=17.0
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
++|||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6899999999999999754
No 42
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=81.59 E-value=1.2 Score=37.18 Aligned_cols=20 Identities=15% Similarity=0.328 Sum_probs=17.9
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 57999999999999999754
No 43
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=79.90 E-value=1.4 Score=33.72 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.4
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
+++.+.||.|+||+++++++++
T Consensus 2 ~~M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 2 DPMYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp CCEEEEEEECSSEEEEEEESSS
T ss_pred CceEEEEEECCCeEEEEEEECC
Confidence 3568999999999999999876
No 44
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=78.86 E-value=1.7 Score=32.57 Aligned_cols=21 Identities=19% Similarity=0.253 Sum_probs=17.6
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+||+++++.+.+.+
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~ 48 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQE 48 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTT
T ss_pred CEEEEEEcccceEEEEEECCC
Confidence 468999999999999887544
No 45
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=77.91 E-value=1.6 Score=34.29 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=18.3
Q ss_pred cCCcEEEEEcCCccEEEEEEeCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~ 49 (146)
.....+|||.|+|.+++++.+++
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp ---CEEEEEECSSEEEEEEECSS
T ss_pred CCCeEEEEEEChhhEEEEEEcCC
Confidence 44678999999999999998766
No 46
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=77.77 E-value=2.2 Score=29.85 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=18.7
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|+..+-||+.++.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 468999999999999999875
No 47
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=76.65 E-value=3.3 Score=32.71 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=19.4
Q ss_pred cCCcEEEEEcCCccEEEEEEeCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~ 49 (146)
.+...|+||.||||..+..+++|
T Consensus 4 m~~~~IavDWGTs~lRa~l~~~g 26 (295)
T 3nuw_A 4 MTARYIAIDWGSTNLRAWLYQGE 26 (295)
T ss_dssp GGCEEEEEEECSSCEEEEEEETT
T ss_pred CCccEEEEEecchheeeeeecCC
Confidence 34568999999999999988865
No 48
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=75.36 E-value=2.7 Score=32.08 Aligned_cols=20 Identities=20% Similarity=0.204 Sum_probs=17.9
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|||+|.|++.+++++..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~ 22 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCE 22 (299)
T ss_dssp CEEEEEECSSCEEEEEECTT
T ss_pred EEEEEEeCCCcEEEEEEcCC
Confidence 68999999999999999754
No 49
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=75.09 E-value=2.4 Score=30.67 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=18.0
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||-|++++-.++++..
T Consensus 1 MrILGIDPGl~~tG~gvi~~~ 21 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVE 21 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEEC
T ss_pred CEEEEEccccCceEEEEEEec
Confidence 468999999999999998643
No 50
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=74.87 E-value=2.3 Score=32.95 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=18.6
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|.|++.+++.+.+
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSS
T ss_pred CEEEEEEEcCCEEEEEEEeCC
Confidence 468999999999999999765
No 51
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=73.17 E-value=3.5 Score=31.67 Aligned_cols=20 Identities=15% Similarity=0.270 Sum_probs=18.0
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|||+|.|++.+++++..
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~ 31 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASD 31 (305)
T ss_dssp EEEEEEECSSCEEEEEEETT
T ss_pred EEEEEEcCccceEEEEEcCC
Confidence 68999999999999999844
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=73.00 E-value=3.2 Score=31.91 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=18.8
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
.|.++|||+|.|++.+++++..
T Consensus 3 ~m~~lgiDiGgt~i~~~l~d~~ 24 (297)
T 4htl_A 3 AMKIAAFDIGGTALKMGVVLPH 24 (297)
T ss_dssp -CCEEEEEECSSEEEEEEECTT
T ss_pred ccEEEEEEeCCCeEEEEEECCC
Confidence 4679999999999999999754
No 53
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=72.92 E-value=3.7 Score=31.91 Aligned_cols=21 Identities=24% Similarity=0.180 Sum_probs=18.5
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
+.++|||+|.|++.+++++..
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~ 26 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSED 26 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETT
T ss_pred eEEEEEEcCccceEEEEEeCC
Confidence 468999999999999999754
No 54
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=71.99 E-value=3.1 Score=32.16 Aligned_cols=19 Identities=16% Similarity=0.443 Sum_probs=17.5
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
.+.||.|+||+++++++++
T Consensus 2 lL~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECcCcEEEEEEECC
Confidence 5789999999999999977
No 55
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=70.97 E-value=0.86 Score=36.01 Aligned_cols=54 Identities=19% Similarity=0.092 Sum_probs=31.1
Q ss_pred CCcEEEEEcCCccEEEEEEeCC------CceEEEecCCC--------CcceeEEEEEcCCeeeecHhHH
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG------VPMEIALNKES--------KRKTPTLVAFHKGERTFGEDAQ 82 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~------~~~~iv~n~~~--------~~~~PS~V~f~~~~~~vG~~A~ 82 (146)
...++|||+|..|++++...++ +.+ ..+..-+ .....-.|.|++...++|+.|.
T Consensus 6 ~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~-~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~ 73 (329)
T 4apw_A 6 NEYVMTLDAGKYETKLIGKNKKGTTEDIKRV-IFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGV 73 (329)
T ss_dssp CEEEEEEEECSSEEEEEEHHHHHHCCSSTTE-EEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSS
T ss_pred CceEEEEecCCceEEEEeccCCCcccceeEE-eecccccccccccccCCCCceEEEECCEEEEeCcccc
Confidence 3568999999999998863111 111 1121100 0001235666777889998764
No 56
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=70.57 E-value=3.1 Score=31.84 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=17.0
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
++|||.|.|++.+++++++
T Consensus 2 ~lgiDiGGT~~~~~l~d~g 20 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEG 20 (291)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEeCccceEEEEEeCC
Confidence 6899999999999999843
No 57
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=69.12 E-value=4.4 Score=31.42 Aligned_cols=22 Identities=9% Similarity=0.129 Sum_probs=18.8
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
.+.++|||+|.|++.+++++..
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~ 23 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGRED 23 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTT
T ss_pred CcEEEEEEECcceeEEEEEECC
Confidence 4678999999999999999754
No 58
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=68.70 E-value=4.1 Score=31.61 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=18.3
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
+.++|||+|.|++.+++++..
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~ 22 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEE 22 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 368999999999999999754
No 59
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=68.46 E-value=3.4 Score=34.30 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=18.8
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
.+..+|||+|.||..|++++-+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~ 88 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLE 88 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEEC
T ss_pred cceEEEEEeCCCeEEEEEEecC
Confidence 4568999999999999998743
No 60
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=67.66 E-value=5.2 Score=30.70 Aligned_cols=21 Identities=29% Similarity=0.547 Sum_probs=18.5
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|.|++.+++++..
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~ 26 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTD 26 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 468999999999999999754
No 61
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=66.22 E-value=5.1 Score=31.12 Aligned_cols=22 Identities=14% Similarity=0.392 Sum_probs=18.8
Q ss_pred CCcEEEEEcCCccEEEEEEe-CC
Q psy351 28 GIAVMSVDLGSEWMKVAIVS-PG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~-~~ 49 (146)
..+.+.||.|+||+++++++ ++
T Consensus 22 ~~M~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 22 ASMILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp -CEEEEEEECSSCEEEEEEETTT
T ss_pred cCcEEEEEeCCCeeEEEEEeCCC
Confidence 34689999999999999998 55
No 62
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=65.74 E-value=3.6 Score=32.14 Aligned_cols=22 Identities=14% Similarity=0.169 Sum_probs=18.0
Q ss_pred ccCCcEEEEEcCCccEEEEEEe
Q psy351 26 SYGIAVMSVDLGSEWMKVAIVS 47 (146)
Q Consensus 26 ~~~~~~iGIDlGTtns~va~~~ 47 (146)
.+...++|||+|.|++.+++++
T Consensus 11 ~~~~~~lgiDiGGT~i~~~l~d 32 (332)
T 1sz2_A 11 GSTKYALVGDVGGTNARLALCD 32 (332)
T ss_dssp ---CEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEEechhheEEEEEE
Confidence 4567899999999999999998
No 63
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=65.54 E-value=2.9 Score=32.03 Aligned_cols=19 Identities=26% Similarity=0.351 Sum_probs=15.4
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
++|||+|.|++.++++++|
T Consensus 2 ~lgiDiGGT~i~~~l~d~g 20 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNG 20 (291)
T ss_dssp --CEECCTTCEEEEEECSS
T ss_pred EEEEEeccccEEEEEEcCC
Confidence 6899999999999999843
No 64
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=65.01 E-value=4.2 Score=33.90 Aligned_cols=21 Identities=14% Similarity=0.279 Sum_probs=18.3
Q ss_pred CCcEEEEEcCCccEEEEEEeC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~ 48 (146)
.+..+|||+|.||..+++++.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~ 80 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISL 80 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEEe
Confidence 456899999999999999964
No 65
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=63.78 E-value=6.4 Score=31.60 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=17.7
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
+...|+||.||||..+..++.+
T Consensus 6 ~~~~IavDWGTSnlRa~l~~~~ 27 (330)
T 3t69_A 6 AGYYAAVDWGTSSFRLWIIGED 27 (330)
T ss_dssp --CEEEEEECSSCEEEEEECTT
T ss_pred CCCEEEEEecchheehheecCC
Confidence 4578999999999999888754
No 66
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=63.10 E-value=6.9 Score=29.55 Aligned_cols=21 Identities=14% Similarity=0.518 Sum_probs=17.9
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|.|++.+++.+..
T Consensus 1 m~~lgidiggt~~~~~l~d~~ 21 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGAD 21 (289)
T ss_dssp CCEEEEEECSSEEEEEEECTT
T ss_pred CeEEEEEeCCCEEEEEEECCC
Confidence 357999999999999999743
No 67
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=62.06 E-value=5.9 Score=30.04 Aligned_cols=21 Identities=24% Similarity=0.602 Sum_probs=18.3
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||+|.|++.+++.+..
T Consensus 4 m~~lgidiggt~i~~~l~d~~ 24 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPD 24 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 468999999999999999744
No 68
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=61.42 E-value=6.4 Score=29.59 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=18.1
Q ss_pred CcEEEEEcCCccEEEEEEeC
Q psy351 29 IAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~ 48 (146)
+.++|||+|.|++.+++.+-
T Consensus 12 ~~~lgidiggt~i~~~l~dl 31 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL 31 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET
T ss_pred CEEEEEEECCCEEEEEEEEC
Confidence 57899999999999999983
No 69
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=61.17 E-value=7 Score=30.42 Aligned_cols=22 Identities=41% Similarity=0.601 Sum_probs=19.0
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|.|++.+++++..
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~ 50 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMK 50 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETT
T ss_pred CcEEEEEEECCCEEEEEEECCC
Confidence 3578999999999999999754
No 70
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=59.68 E-value=9 Score=29.81 Aligned_cols=24 Identities=8% Similarity=0.130 Sum_probs=19.8
Q ss_pred ccCCcEEEEEcCCccEEEEEEeCC
Q psy351 26 SYGIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 26 ~~~~~~iGIDlGTtns~va~~~~~ 49 (146)
-..+.++|||+|.|++.+++++..
T Consensus 21 n~~~~~lgiDiGgt~i~~~l~d~~ 44 (327)
T 4db3_A 21 QSNAMYYGFDVGGTKIEFGAFNEK 44 (327)
T ss_dssp CCSCCEEEEEECSSEEEEEEECTT
T ss_pred CCCcEEEEEEECCCEEEEEEEeCC
Confidence 334578999999999999999754
No 71
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=58.27 E-value=5.7 Score=33.44 Aligned_cols=20 Identities=25% Similarity=0.434 Sum_probs=17.8
Q ss_pred CcEEEEEcCCccEEEEEEeC
Q psy351 29 IAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~ 48 (146)
+..++||+|.||.+|+.++-
T Consensus 80 G~~LalDlGGTn~Rv~~V~l 99 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKL 99 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEEE
Confidence 46899999999999999864
No 72
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=58.26 E-value=9.9 Score=29.28 Aligned_cols=23 Identities=9% Similarity=0.212 Sum_probs=19.1
Q ss_pred cCCcEEEEEcCCccEEEEEEeCC
Q psy351 27 YGIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 27 ~~~~~iGIDlGTtns~va~~~~~ 49 (146)
..+.++|||+|.|++.+++.+..
T Consensus 22 ~~~~~lgiDiGgt~i~~~l~d~~ 44 (327)
T 2ap1_A 22 SNAMYYGFDIGGTKIALGVFDST 44 (327)
T ss_dssp -CCEEEEEEECSSEEEEEEEETT
T ss_pred CCceEEEEEECCCEEEEEEEeCC
Confidence 34568999999999999999854
No 73
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=58.00 E-value=9.7 Score=29.46 Aligned_cols=22 Identities=23% Similarity=0.504 Sum_probs=18.7
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|.|++.+++++..
T Consensus 18 ~~~~lgidiggt~i~~~l~d~~ 39 (321)
T 3r8e_A 18 QGMILGIDVGGTSVKFGLVTPE 39 (321)
T ss_dssp -CCEEEEECCSSEEEEEEECTT
T ss_pred CcEEEEEEECCCEEEEEEEcCC
Confidence 4578999999999999999754
No 74
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=57.31 E-value=9.1 Score=29.63 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=18.6
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|.|++.+++.+..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~ 27 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAE 27 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEeCCCEEEEEEECCC
Confidence 468999999999999999854
No 75
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=55.55 E-value=9 Score=30.31 Aligned_cols=21 Identities=14% Similarity=0.191 Sum_probs=18.5
Q ss_pred CCcEEEEEcCCccEEEEEEeC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~ 48 (146)
.+.++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 457899999999999999874
No 76
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=54.22 E-value=11 Score=30.28 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=18.4
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
+.++|||+|.|++.+++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 358999999999999999865
No 77
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=54.12 E-value=8.2 Score=34.88 Aligned_cols=22 Identities=18% Similarity=0.277 Sum_probs=18.8
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
.+..+|||+|.||..+++++..
T Consensus 77 ~G~~laiDlGGTnirv~lv~~~ 98 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQVN 98 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEEec
Confidence 4568999999999999999643
No 78
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=50.85 E-value=10 Score=34.33 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=18.6
Q ss_pred CCcEEEEEcCCccEEEEEEeC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~ 48 (146)
.+..+|||+|.||..|++++-
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l 545 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKI 545 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEE
T ss_pred ceEEEEEEECCCcEEEEEEEe
Confidence 467899999999999999874
No 79
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=50.47 E-value=15 Score=29.17 Aligned_cols=21 Identities=5% Similarity=0.289 Sum_probs=18.4
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|.|++.+++++..
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~ 107 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDAS 107 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEEECCCEEEEEEECCC
Confidence 468999999999999999754
No 80
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=49.51 E-value=12 Score=29.75 Aligned_cols=22 Identities=9% Similarity=0.063 Sum_probs=18.9
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|.|++.+++++..
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~ 105 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLS 105 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETT
T ss_pred ccEEEEEEEcCCEEEEEEEcCC
Confidence 3568999999999999999854
No 81
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=47.50 E-value=13 Score=30.95 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=20.4
Q ss_pred CCcEEEEEcCCccEEEEEEeCCCceE
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPGVPME 53 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~~~~~ 53 (146)
.+..++||||.||..|+.++-+..++
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~~~ 83 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTGVQ 83 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSSEE
T ss_pred eeEEEEEEecCCeEEEEEEEECCceE
Confidence 45789999999999999987542443
No 82
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=46.96 E-value=15 Score=29.86 Aligned_cols=20 Identities=25% Similarity=0.511 Sum_probs=16.9
Q ss_pred CCcEEEEEcCCccEEEEEEe
Q psy351 28 GIAVMSVDLGSEWMKVAIVS 47 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~ 47 (146)
...++|+|+||+..++.+.+
T Consensus 7 ~~~ivglDIGts~I~~vv~~ 26 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLG 26 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEccCCEEEEEEEE
Confidence 45789999999999987775
No 83
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=46.42 E-value=14 Score=29.67 Aligned_cols=20 Identities=15% Similarity=0.413 Sum_probs=14.9
Q ss_pred cEEEEEcCCccEEEEEEeCC
Q psy351 30 AVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~~~ 49 (146)
.++|+|.|..|.++|..+..
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~ 20 (334)
T 3cet_A 1 MILGIDIGGANTKITELHEN 20 (334)
T ss_dssp CEEEEEEC--CEEEEEECST
T ss_pred CeeEEEecccceeeeeecCC
Confidence 47999999999999987633
No 84
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=46.34 E-value=16 Score=28.68 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=19.1
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
|.++|||-++..+.+|+++++
T Consensus 1 M~iLgIdts~~~~~val~~~g 21 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSED 21 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSS
T ss_pred CEEEEEEccCCCeEEEEEECC
Confidence 468999999999999999877
No 85
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=45.03 E-value=14 Score=30.90 Aligned_cols=20 Identities=30% Similarity=0.403 Sum_probs=17.6
Q ss_pred CCcEEEEEcCCccEEEEEEe
Q psy351 28 GIAVMSVDLGSEWMKVAIVS 47 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~ 47 (146)
.+..++||||.||..|+.++
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEE
T ss_pred ceEEEEEEecCceEEEEEEE
Confidence 34689999999999999986
No 86
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=42.86 E-value=35 Score=26.96 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=14.0
Q ss_pred CCcEEEEEcCCccEEE
Q psy351 28 GIAVMSVDLGSEWMKV 43 (146)
Q Consensus 28 ~~~~iGIDlGTtns~v 43 (146)
.+.++|||+|..++++
T Consensus 3 ~~~iigiD~G~~~~K~ 18 (355)
T 3js6_A 3 NVYVMALDFGNGFVKG 18 (355)
T ss_dssp CEEEEEEEECSSEEEE
T ss_pred ccEEEEEEcCCCcEEE
Confidence 3578999999999995
No 87
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=42.62 E-value=17 Score=29.38 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.4
Q ss_pred CcEEEEEcCCccEEEEEEeCC
Q psy351 29 IAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~~ 49 (146)
..++|||+|.|++.+++++..
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETT
T ss_pred CEEEEEEECCCEEEEEEECCC
Confidence 468999999999999999754
No 88
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=42.48 E-value=17 Score=31.43 Aligned_cols=18 Identities=28% Similarity=0.514 Sum_probs=15.9
Q ss_pred cEEEEEcCCccEEEEEEe
Q psy351 30 AVMSVDLGSEWMKVAIVS 47 (146)
Q Consensus 30 ~~iGIDlGTtns~va~~~ 47 (146)
.++|||.||+.+++++.+
T Consensus 3 ~i~GiDIGnsttev~l~~ 20 (607)
T 1nbw_A 3 LIAGIDIGNATTEVALAS 20 (607)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEecCceEEEEEEE
Confidence 588999999999988765
No 89
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=41.45 E-value=23 Score=28.37 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=19.0
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
...++|||+|.|++.+++++.|
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G 29 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGG 29 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETT
T ss_pred CCEEEEEEECcceEEEEEEECC
Confidence 4578999999999999999843
No 90
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=34.16 E-value=24 Score=26.25 Aligned_cols=16 Identities=25% Similarity=0.646 Sum_probs=13.8
Q ss_pred CCcEEEEEcCCccEEE
Q psy351 28 GIAVMSVDLGSEWMKV 43 (146)
Q Consensus 28 ~~~~iGIDlGTtns~v 43 (146)
...++|||+|.|++.+
T Consensus 5 ~~~~lgiDIGGT~i~~ 20 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVKI 20 (226)
T ss_dssp GCCEEEEEECSSEEEE
T ss_pred CCEEEEEEECCCEEEE
Confidence 3578999999999995
No 91
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=31.90 E-value=36 Score=26.12 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=17.6
Q ss_pred CcEEEEEcCCccEEEEEEeC
Q psy351 29 IAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~ 48 (146)
..+++||+|.-|...|..++
T Consensus 40 ~sIlSID~GikNlAyc~l~~ 59 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFASQ 59 (258)
T ss_dssp SSEEEEEECSTTEEEEEEEE
T ss_pred CcEEEEecCCCceEEEEEcc
Confidence 38999999999999988874
No 92
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=31.35 E-value=37 Score=29.55 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=16.9
Q ss_pred CcEEEEEcCCccEEEEEEeC
Q psy351 29 IAVMSVDLGSEWMKVAIVSP 48 (146)
Q Consensus 29 ~~~iGIDlGTtns~va~~~~ 48 (146)
..-++||+|||..++++++-
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL 225 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDL 225 (631)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred ceEEEEEecccceeEEEEEC
Confidence 35689999999999988873
No 93
>2ja9_A Exosome complex exonuclease RRP40; RNA-binding protein, RNA, S1 domain, KH domain, hydrolase, RNA-binding, nuclear protein; 2.20A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.51.1.1
Probab=28.15 E-value=53 Score=23.60 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=26.6
Q ss_pred cchhhccCCCCChhhhhhccCcceEEeecCCCCceEEEEcC
Q psy351 95 YFLDLLGKSIDSPVVQLFKSRFPYYDIVADEERGTIVFKTN 135 (146)
Q Consensus 95 ~~KrliG~~~~d~~v~~~~~~~p~~~v~~d~~~g~~~~~~~ 135 (146)
-.+|++|++-. +.++...+..+|++... .||.+|+...
T Consensus 101 ~v~rl~~~~~~-~~l~~l~~~~~~ei~vG--~NG~IWi~~~ 138 (175)
T 2ja9_A 101 FARQLLFNNDF-PLLKVLAAHTKFEVAIG--LNGKIWVKCE 138 (175)
T ss_dssp HHHHHHHCTTC-CHHHHHHTTCCCEEEEE--TTTEEEEECS
T ss_pred HhhHHhcCCCc-chHHhhhccCCeEEEEE--CCcEEEEecC
Confidence 46788885322 24566667789998764 5899999754
No 94
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=26.47 E-value=19 Score=29.43 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=16.9
Q ss_pred CCcEEEEEcCCccEEEEEEeCC
Q psy351 28 GIAVMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 28 ~~~~iGIDlGTtns~va~~~~~ 49 (146)
....|-||.||.++++.+..+.
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~ 25 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGND 25 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSS
T ss_pred CCCeEEEECCCCeEEEEECCCC
Confidence 3467889999999999887555
No 95
>2nn6_G Exosome complex exonuclease RRP40; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=22.03 E-value=55 Score=25.52 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=25.9
Q ss_pred cchhhccCCCCChhhhhhccCcceEEeecCCCCceEEEEcC
Q psy351 95 YFLDLLGKSIDSPVVQLFKSRFPYYDIVADEERGTIVFKTN 135 (146)
Q Consensus 95 ~~KrliG~~~~d~~v~~~~~~~p~~~v~~d~~~g~~~~~~~ 135 (146)
-.+|++|++. ..++...+.++|+++.. .||.+|+...
T Consensus 220 lvrrl~~~~~--~~l~~L~~~~~~eI~vG--~NG~IWI~~~ 256 (289)
T 2nn6_G 220 LIRKLLAPDC--EIIQEVGKLYPLEIVFG--MNGRIWVKAK 256 (289)
T ss_dssp HHHHHHCTTC--SHHHHTTCSSSCCCEEE--TTTEEEECCS
T ss_pred HhhhhhcCch--hHHHHhcccCCeEEEEE--CCcEEEEecC
Confidence 3568887643 24566667789988764 5899999753
No 96
>4dkw_A Large terminase protein; DNA-packaging, small terminase, nuclease FO endonuclease, DNA, DNA-packaging motor, hydrolase; 2.02A {Enterobacteria phage P22}
Probab=21.43 E-value=60 Score=23.82 Aligned_cols=15 Identities=13% Similarity=0.188 Sum_probs=11.4
Q ss_pred CcEEEEEcCCccEEE
Q psy351 29 IAVMSVDLGSEWMKV 43 (146)
Q Consensus 29 ~~~iGIDlGTtns~v 43 (146)
...+|+|||.++-.+
T Consensus 27 ~~~~G~DfG~~~P~a 41 (211)
T 4dkw_A 27 YVIDAQDFGWNHPQA 41 (211)
T ss_dssp EEEEEEECCSSSCEE
T ss_pred eEEEEEECCCCCCcE
Confidence 456899999998443
No 97
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=20.38 E-value=40 Score=25.06 Aligned_cols=17 Identities=12% Similarity=0.339 Sum_probs=12.5
Q ss_pred EEEEEcCCccEEEEEEeCC
Q psy351 31 VMSVDLGSEWMKVAIVSPG 49 (146)
Q Consensus 31 ~iGIDlGTtns~va~~~~~ 49 (146)
.+.||.|+||++ +++++
T Consensus 3 ~L~iDiGNT~ik--~~~~~ 19 (219)
T 2nrh_A 3 LLLCDIGNSNAN--FLDDN 19 (219)
T ss_dssp CCEEEECSSEEE--EEC--
T ss_pred EEEEEeCCCEEE--EEECC
Confidence 468999999999 55555
Done!