RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3511
(91 letters)
>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 175
Score = 56.5 bits (135), Expect = 4e-12
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
M A +G P +E V PGP +VLVK+ A+G+ + + G +P P LP
Sbjct: 6 MKAAVVHAYGAPLRIEEVKVPLPGP---GQVLVKIEASGVCHTDLHAAEGDWPVKPPLPF 62
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
I G E G V VG GV K + V
Sbjct: 63 IPGHEGVGYVAAVGSGVTRVKEGDRV 88
>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 52.0 bits (123), Expect = 1e-10
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 1 MLAVQCKRWGEPRVLELTT-VDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLP 59
M AV+ +G P VL+L + + P P D +VL+KV A G+NPVETYIRSG Y P LP
Sbjct: 3 MRAVRVFEFGGPEVLKLRSDIAVPIPK-DHQVLIKVHACGVNPVETYIRSGTYSRKPLLP 61
Query: 60 AILGTEVSGIVEEVGQGVKHF 80
G++V+G++E VG F
Sbjct: 62 YTPGSDVAGVIEAVGDNASAF 82
>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 171
Score = 52.3 bits (124), Expect = 2e-10
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
M A +++ EP L++ V+KP EVLV++ A G+ + + G +P P LP
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTIS-YGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPL 57
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
I G E GIVEEVG GV H KV + V
Sbjct: 58 IPGHEGVGIVEEVGPGVTHLKVGDRV 83
>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 177
Score = 50.3 bits (119), Expect = 1e-09
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPD--- 57
M AV+ G+P L L + P P +VL+KV AAG+ + ++R G++ NL
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKP-KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVED 57
Query: 58 ----LPAILGTEVSGIVEEVGQGVKHFKVKNIV 86
LP LG E++G +EEVG V + ++V
Sbjct: 58 LGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV 90
>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human
(Homo sapiens), different isozymes [TaxId: 9606]}
Length = 197
Score = 47.9 bits (113), Expect = 7e-09
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A G+P +E V P EV +K++A + + Y SG P P
Sbjct: 7 CKAAVAWEAGKPLSIEEIEVAPPKA---HEVRIKIIATAVCHTDAYTLSGADPEGCF-PV 62
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
ILG +GIVE VG+GV K + V
Sbjct: 63 ILGHLGAGIVESVGEGVTKLKAGDTV 88
>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH
{Escherichia coli [TaxId: 562]}
Length = 146
Score = 47.2 bits (111), Expect = 8e-09
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
+ A+ ++ + + T+D+ + +V V V + +N + +G+ + + P
Sbjct: 1 LQALLLEQQDGKTLASVQTLDESRLP-EGDVTVDVHWSSLNYKDALAITGKGKIIRNFPM 59
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIVR 87
I G + +G V F V
Sbjct: 60 IPGIDFAGTVRTSEDPR--FHAGQEVL 84
>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 152
Score = 47.2 bits (111), Expect = 9e-09
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A + + T+ + +VLV+V + +N + + P
Sbjct: 4 FQAFVVNKTETEFTAGVQTISMDDLP-EGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
+ G +++G+V + I
Sbjct: 63 VPGIDLAGVVVSSQHPRFREGDEVIA 88
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol
dehydrogenase, ADH6 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 192
Score = 47.1 bits (111), Expect = 1e-08
Identities = 16/80 (20%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
+ + + + + T D P P D ++ +K+ A G+ + + +G + N+ +P
Sbjct: 7 FEGIAIQSHEDWKNPKKTKYD-PKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK-MPL 64
Query: 61 ILGTEVSGIVEEVGQGVKHF 80
++G E+ G V ++G
Sbjct: 65 VVGHEIVGKVVKLGPKSNSG 84
>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 194
Score = 47.2 bits (111), Expect = 2e-08
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
++A G EL + P DEVLVKV+A G+ + +R +YP LPA
Sbjct: 4 IIAAVTPCKGAD--FELQALKIRQPQ-GDEVLVKVVATGMCHTDLIVRDQKYPV--PLPA 58
Query: 61 ILGTEVSGIVEEVGQGVKHFKV 82
+LG E SGI+E +G V +V
Sbjct: 59 VLGHEGSGIIEAIGPNVTELQV 80
>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase
{Escherichia coli [TaxId: 562]}
Length = 147
Score = 44.6 bits (104), Expect = 8e-08
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 3 AVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYP 53
++ + G P VL+ P ++E+ V+ A GIN ++TYIRSG YP
Sbjct: 3 RIEFHKHGGPEVLQAVEFTPADPA-ENEIQVENKAIGINFIDTYIRSGLYP 52
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol
dehydrogenase) {Silverleaf whitefly (Bemisia
argentifolii) [TaxId: 77855]}
Length = 178
Score = 43.1 bits (100), Expect = 4e-07
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 11 EPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSG--QYPNLPDLPAILGTEVSG 68
+ L L P P +DEVL+++ GI + + + P ++G E SG
Sbjct: 9 KQNDLRLEQRPIPEPK-EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASG 67
Query: 69 IVEEVGQGVKHFKVKNIV 86
V +VG+ VKH K + V
Sbjct: 68 TVVKVGKNVKHLKKGDRV 85
>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 185
Score = 43.4 bits (101), Expect = 4e-07
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 12 PRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPN--LPDLPAILGTEVSGI 69
P L L P P +EVL+++ + GI + + + P +LG E SG
Sbjct: 16 PGDLRLENYPIPEPG-PNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT 74
Query: 70 VEEVGQGVKHFK 81
VE+VG VKH K
Sbjct: 75 VEKVGSSVKHLK 86
>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod
(Gadus callarias) [TaxId: 8053]}
Length = 199
Score = 43.4 bits (101), Expect = 4e-07
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A +P V+E VD P +E+ +K++A G+ + Y P
Sbjct: 9 CKAAVAWEANKPLVIEEIEVDVPHA---NEIRIKIIATGVCHTDLYHLFEGKHK-DGFPV 64
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
+LG E +GIVE VG GV F+ V
Sbjct: 65 VLGHEGAGIVESVGPGVTEFQPGEKV 90
>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse
(Mus musculus), class II [TaxId: 10090]}
Length = 202
Score = 43.3 bits (101), Expect = 4e-07
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A + G P +E V P EV ++V+A + P + P
Sbjct: 9 CKAAIAWKTGSPLCIEEIEVSPPKA---CEVRIQVIATCVCPTDINAT--DPKKKALFPV 63
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
+LG E +GIVE VG GV +FK + V
Sbjct: 64 VLGHECAGIVESVGPGVTNFKPGDKV 89
>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase
{Frog (Rana perezi) [TaxId: 8403]}
Length = 198
Score = 42.9 bits (100), Expect = 6e-07
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A +P LE TV P EV +K++A+GI ++ + P+ P
Sbjct: 9 CKAAVAWEPHKPLSLETITVAPPKA---HEVRIKILASGICGSDSSVLKEIIPSKF--PV 63
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
ILG E G+VE +G GV K + V
Sbjct: 64 ILGHEAVGVVESIGAGVTCVKPGDKV 89
>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase
{Yeast (Candida tropicalis) [TaxId: 5482]}
Length = 175
Score = 42.4 bits (98), Expect = 8e-07
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 1 MLAVQCKRWGEPR-VLELTTVDKPGPCL-DDEVLVKVMAAGINPVETYIRSGQYP 53
AV + GEP+ VL + + L +EV+VK + + +NP + G YP
Sbjct: 4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYP 58
>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP
{Bacillus subtilis [TaxId: 1423]}
Length = 162
Score = 41.0 bits (95), Expect = 3e-06
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A+Q ++ + + + T+ D VL+KV +GIN + + + P
Sbjct: 4 FQALQAEKNADDVSVHVKTISTEDLP-KDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL 62
Query: 61 ILGTEVSGIVEE 72
ILG + +G V
Sbjct: 63 ILGIDAAGTVVS 74
>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase
{Thermus thermophilus [TaxId: 274]}
Length = 131
Score = 39.4 bits (91), Expect = 7e-06
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
M A KR G P LEL + +P + EV+++V A G+N + +R G Y P
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAE-EGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPF 57
Query: 61 ILGTEVSGI 69
I G EV G+
Sbjct: 58 IPGMEVVGV 66
>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse
(Equus caballus) [TaxId: 9796]}
Length = 198
Score = 39.8 bits (92), Expect = 8e-06
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A +P +E V P EV +K++A GI + ++ SG LP
Sbjct: 9 CKAAVLWEEKKPFSIEEVEVAPPKA---HEVRIKMVATGICRSDDHVVSGTLV--TPLPV 63
Query: 61 ILGTEVSGIVEEVGQGVKHFKVKNIV 86
I G E +GIVE +G+GV + + V
Sbjct: 64 IAGHEAAGIVESIGEGVTTVRPGDKV 89
>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436
{Thermotoga maritima [TaxId: 2336]}
Length = 184
Score = 39.4 bits (91), Expect = 1e-05
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
A+ +++ +P V + + +LV++++AG+ + ++ G+ P LP
Sbjct: 5 AHAMVLEKFNQPLVYKEFEISDIPR---GSILVEILSAGVCGSDVHMFRGEDPR-VPLPI 60
Query: 61 ILGTEVSGIVEEVGQGVKHF 80
ILG E +G V EV +
Sbjct: 61 ILGHEGAGRVVEVNGEKRDL 80
>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 201
Score = 39.1 bits (90), Expect = 1e-05
Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 9 WGEPRVLELTTVDKP------GPCLDDEVLVKVMAAGINPVETYIRSGQYP 53
+ +E+ +D P G ++ V++KV++ I + ++ G+
Sbjct: 7 YLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT 57
>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 171
Score = 38.1 bits (87), Expect = 2e-05
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 3 AVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPD 57
A + + +P L + VD P +V+V++ AG+ + ++ G + L
Sbjct: 2 AARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQ 54
>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 35.3 bits (80), Expect = 3e-04
Identities = 8/56 (14%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLP 56
+ AV +P LE + + P ++V +++ G+ + + ++
Sbjct: 1 IKAVGAYSAKQP--LEPMDITRREPG-PNDVKIEIAYCGVCHSDLHQVRSEWAGTV 53
>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary
alcohol dehydrogenase {Clostridium beijerinckii [TaxId:
1520]}
Length = 177
Score = 32.6 bits (73), Expect = 0.002
Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 5/63 (7%)
Query: 1 MLAVQCKRWGEPRVLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPNLPDLPA 60
M L ++P + +V+ +A + +
Sbjct: 1 MKGFAML---GINKLGWIEKERPVAG-SYDAIVRPLAVSPCTSDIHTVFEGALGDR-KNM 55
Query: 61 ILG 63
ILG
Sbjct: 56 ILG 58
>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4
12-hydroxydehydrogenase/prostaglandin 15-keto reductase
{Guinea pig (Cavia porcellus) [TaxId: 10141]}
Length = 147
Score = 32.3 bits (73), Expect = 0.003
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 4 VQCKRW-------GEPRV--LELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPN 54
V+ K W G+P EL TV+ P + EVL++ + ++P
Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLK-NGEVLLEALFLSVDP----YMRIASKR 56
Query: 55 LPDLPAILGTEVSGIVE 71
L + ++G +V+ +VE
Sbjct: 57 LKEGAVMMGQQVARVVE 73
>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding
alcohol dehydrogenase {Mouse (Mus musculus) [TaxId:
10090]}
Length = 166
Score = 31.7 bits (71), Expect = 0.006
Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 4/82 (4%)
Query: 10 GEPR--VLELTTVDKPGPCLDDEVLVKVMAAGINPVETYIRSGQYPN--LPDLPAILGTE 65
G P + + +V V+ + ++P + L +
Sbjct: 18 GNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVAD 77
Query: 66 VSGIVEEVGQGVKHFKVKNIVR 87
GI + + V
Sbjct: 78 GGGIGIVEESKHQKLAKGDFVT 99
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal
domain {Penicillium sp. [TaxId: 5081]}
Length = 354
Score = 25.2 bits (54), Expect = 1.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 23 PGPCLDDEVLVKVMAAGINPVETYI 47
P L ++ KV A G N V Y+
Sbjct: 33 PVASLYIDIFEKVKALGFNCVSFYV 57
>d1l0aa1 b.8.1.1 (A:350-504) TNF receptor associated factor 3
(TRAF3) {Human (Homo sapiens) [TaxId: 9606]}
Length = 155
Score = 24.4 bits (52), Expect = 2.1
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 6 CKRWGEPRVLELTTVDKPGPCLDDEVLVKV 35
G P + T ++ DD + +KV
Sbjct: 116 NIASGCPVFVAQTVLENGTYIKDDTIFIKV 145
>d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 155
Score = 23.6 bits (50), Expect = 3.8
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 6 CKRWGEPRVLELTTVDKPGPCLDDEVLVKV 35
K +G + L + + DD +LV+
Sbjct: 122 PKGFGYVTFMHLEALRQRTFIKDDTLLVRC 151
>d1xdpa2 d.322.1.2 (A:107-314) Polyphosphate kinase, PPK
{Escherichia coli [TaxId: 562]}
Length = 208
Score = 23.0 bits (49), Expect = 6.9
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 39 GINPVETYIRSGQYPNLPDL 58
I+ ++ + G+Y N D
Sbjct: 175 TISRYDSIVPGGRYHNFKDF 194
>d1qe5a_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP
{Cellulomonas sp. [TaxId: 40001]}
Length = 266
Score = 22.7 bits (48), Expect = 9.6
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 46 YIRSGQYPNLPDLPAILGTEVSGIVEEVGQGVKHFKVKNI 85
+I D+ +LG+ G E +G+ V I
Sbjct: 20 HIAQATGVEGHDMALVLGSGWGGAAELLGEVVAEVPTHEI 59
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.137 0.404
Gapped
Lambda K H
0.267 0.0569 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 340,752
Number of extensions: 14072
Number of successful extensions: 64
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 32
Length of query: 91
Length of database: 2,407,596
Length adjustment: 55
Effective length of query: 36
Effective length of database: 1,652,446
Effective search space: 59488056
Effective search space used: 59488056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.2 bits)