Your job contains 1 sequence.
>psy3521
MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN
LPPSHYEFPNGYHQLIHIPTYLSNLPHY
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3521
(88 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A4FUX8 - symbol:ACTL6B "Actin-like protein 6B" ... 238 1.4e-19 1
UNIPROTKB|E2RCX1 - symbol:ACTL6B "Uncharacterized protein... 238 1.4e-19 1
UNIPROTKB|O94805 - symbol:ACTL6B "Actin-like protein 6B" ... 238 1.4e-19 1
UNIPROTKB|F2Z4Z7 - symbol:ACTL6B "Uncharacterized protein... 238 1.4e-19 1
MGI|MGI:1933548 - symbol:Actl6b "actin-like 6B" species:1... 238 1.4e-19 1
RGD|1307763 - symbol:Actl6b "actin-like 6B" species:10116... 238 1.4e-19 1
UNIPROTKB|E1BR36 - symbol:ACTL6A "Uncharacterized protein... 234 2.2e-19 1
UNIPROTKB|J9PAV6 - symbol:ACTL6A "Uncharacterized protein... 234 2.4e-19 1
UNIPROTKB|E1BS78 - symbol:ACTL6A "Uncharacterized protein... 234 3.7e-19 1
UNIPROTKB|A4IFJ8 - symbol:ACTL6A "ACTL6A protein" species... 234 3.9e-19 1
UNIPROTKB|F1Q0F8 - symbol:ACTL6A "Uncharacterized protein... 234 3.9e-19 1
UNIPROTKB|O96019 - symbol:ACTL6A "Actin-like protein 6A" ... 234 3.9e-19 1
UNIPROTKB|Q4R333 - symbol:ACTL6A "Actin-like protein 6A" ... 234 3.9e-19 1
MGI|MGI:1861453 - symbol:Actl6a "actin-like 6A" species:1... 234 3.9e-19 1
RGD|1307747 - symbol:Actl6a "actin-like 6A" species:10116... 234 3.9e-19 1
UNIPROTKB|F1SGC8 - symbol:ACTL6A "Uncharacterized protein... 229 1.4e-18 1
ZFIN|ZDB-GENE-020419-36 - symbol:actl6a "actin-like 6A" s... 228 1.8e-18 1
ZFIN|ZDB-GENE-050522-191 - symbol:actl6b "actin-like 6B" ... 211 1.3e-16 1
FB|FBgn0025716 - symbol:Bap55 "Brahma associated protein ... 208 2.9e-16 1
WB|WBGene00022774 - symbol:swsn-6 species:6239 "Caenorhab... 166 1.2e-11 1
TAIR|locus:2014104 - symbol:ARP4 "AT1G18450" species:3702... 115 4.1e-06 1
POMBASE|SPAC23D3.09 - symbol:arp42 "SWI/SNF and RSC compl... 103 7.6e-05 1
>UNIPROTKB|A4FUX8 [details] [associations]
symbol:ACTL6B "Actin-like protein 6B" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR004001
PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524 GO:GO:0007399
GO:GO:0005730 GO:GO:0006355 GO:GO:0006351 GO:GO:0006338
eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 HOGENOM:HOG000233340 OrthoDB:EOG4XKV6Z GO:GO:0016514
GeneTree:ENSGT00660000095557 EMBL:BC123419 IPI:IPI00687878
RefSeq:NP_001076839.1 UniGene:Bt.8753 ProteinModelPortal:A4FUX8
SMR:A4FUX8 PRIDE:A4FUX8 Ensembl:ENSBTAT00000010915 GeneID:504476
KEGG:bta:504476 CTD:51412 InParanoid:A4FUX8 KO:K11652 OMA:KGKTFHI
NextBio:20866680 ArrayExpress:A4FUX8 GO:GO:0071565 Uniprot:A4FUX8
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>UNIPROTKB|E2RCX1 [details] [associations]
symbol:ACTL6B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524
PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190 SMART:SM00268
GeneTree:ENSGT00660000095557 CTD:51412 KO:K11652 OMA:KGKTFHI
EMBL:AAEX03004274 RefSeq:XP_850533.2 ProteinModelPortal:E2RCX1
Ensembl:ENSCAFT00000022731 GeneID:608417 KEGG:cfa:608417
Uniprot:E2RCX1
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>UNIPROTKB|O94805 [details] [associations]
symbol:ACTL6B "Actin-like protein 6B" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006325 "chromatin
organization" evidence=NAS] [GO:0016514 "SWI/SNF complex"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071565
"nBAF complex" evidence=ISS] [GO:0005200 "structural constituent of
cytoskeleton" evidence=TAS] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0006338
"chromatin remodeling" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000
GO:GO:0005524 GO:GO:0007399 GO:GO:0005730 GO:GO:0005200
GO:GO:0006357 GO:GO:0006351 GO:GO:0006338 GO:GO:0003713
EMBL:CH236956 EMBL:CH471091 eggNOG:COG5277 PANTHER:PTHR11937
Pfam:PF00022 PRINTS:PR00190 SMART:SM00268 HOGENOM:HOG000233340
HOVERGEN:HBG003771 OrthoDB:EOG4XKV6Z GO:GO:0016514 CTD:51412
KO:K11652 OMA:KGKTFHI GO:GO:0071565 EMBL:AF053356 EMBL:AB015906
EMBL:AF041475 EMBL:AK314940 EMBL:AC099394 EMBL:BC020944
IPI:IPI00007776 RefSeq:NP_057272.1 UniGene:Hs.259831
ProteinModelPortal:O94805 SMR:O94805 IntAct:O94805
MINT:MINT-1419266 STRING:O94805 PhosphoSite:O94805 PaxDb:O94805
PRIDE:O94805 DNASU:51412 Ensembl:ENST00000160382 GeneID:51412
KEGG:hsa:51412 UCSC:uc003uvy.3 GeneCards:GC07M100240 HGNC:HGNC:160
HPA:HPA045126 MIM:612458 neXtProt:NX_O94805 PharmGKB:PA24482
InParanoid:O94805 PhylomeDB:O94805 GenomeRNAi:51412 NextBio:54961
ArrayExpress:O94805 Bgee:O94805 CleanEx:HS_ACTL6B
Genevestigator:O94805 GermOnline:ENSG00000077080 Uniprot:O94805
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>UNIPROTKB|F2Z4Z7 [details] [associations]
symbol:ACTL6B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR004001 PROSITE:PS00432
InterPro:IPR004000 GO:GO:0005524 GO:GO:0007399 GO:GO:0005730
GO:GO:0006338 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 GO:GO:0016514 GeneTree:ENSGT00660000095557 CTD:51412
KO:K11652 OMA:KGKTFHI GO:GO:0071565 EMBL:FP565722
RefSeq:XP_003124418.1 ProteinModelPortal:F2Z4Z7 SMR:F2Z4Z7
PRIDE:F2Z4Z7 Ensembl:ENSSSCT00000008410 GeneID:100516853
KEGG:ssc:100516853 Uniprot:F2Z4Z7
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>MGI|MGI:1933548 [details] [associations]
symbol:Actl6b "actin-like 6B" species:10090 "Mus musculus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=IC] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IDA] InterPro:IPR004001 PROSITE:PS00432
InterPro:IPR004000 MGI:MGI:1933548 GO:GO:0005524 GO:GO:0007399
GO:GO:0005730 GO:GO:0006355 EMBL:CH466529 GO:GO:0006351
GO:GO:0006338 EMBL:AF312033 eggNOG:COG5277 PANTHER:PTHR11937
Pfam:PF00022 PRINTS:PR00190 SMART:SM00268 HOGENOM:HOG000233340
HOVERGEN:HBG003771 GO:GO:0016514 GeneTree:ENSGT00660000095557
CTD:51412 KO:K11652 OMA:KGKTFHI GO:GO:0071565 EMBL:AB075226
EMBL:BC049539 IPI:IPI00117981 RefSeq:NP_113581.1 UniGene:Mm.31646
ProteinModelPortal:Q99MR0 SMR:Q99MR0 IntAct:Q99MR0 STRING:Q99MR0
PhosphoSite:Q99MR0 PaxDb:Q99MR0 PRIDE:Q99MR0
Ensembl:ENSMUST00000139395 GeneID:83766 KEGG:mmu:83766
UCSC:uc009acu.1 InParanoid:Q54A88 ChiTaRS:ACTL6B NextBio:350756
Bgee:Q99MR0 CleanEx:MM_ACTL6B Genevestigator:Q99MR0
GermOnline:ENSMUSG00000029712 GO:GO:0006333 Uniprot:Q99MR0
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>RGD|1307763 [details] [associations]
symbol:Actl6b "actin-like 6B" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=ISS] InterPro:IPR004001
PROSITE:PS00432 InterPro:IPR004000 RGD:1307763 GO:GO:0005524
GO:GO:0007399 GO:GO:0005730 GO:GO:0006355 GO:GO:0006351
GO:GO:0006338 eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022
PRINTS:PR00190 SMART:SM00268 HOGENOM:HOG000233340
HOVERGEN:HBG003771 OrthoDB:EOG4XKV6Z GO:GO:0016514
GeneTree:ENSGT00660000095557 CTD:51412 KO:K11652 OMA:KGKTFHI
GO:GO:0071565 EMBL:CH473973 IPI:IPI00923128 RefSeq:NP_001099387.2
UniGene:Rn.44972 ProteinModelPortal:P86173 SMR:P86173 STRING:P86173
PhosphoSite:P86173 PRIDE:P86173 Ensembl:ENSRNOT00000001910
GeneID:288563 KEGG:rno:288563 UCSC:RGD:1307763 NextBio:628323
Genevestigator:P86173 Uniprot:P86173
Length = 426
Score = 238 (88.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ AKE +++ PP W +K+ LP+V++SWHNY +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 279 MPTVHYEMPNGYN 291
>UNIPROTKB|E1BR36 [details] [associations]
symbol:ACTL6A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524
PANTHER:PTHR11937 Pfam:PF00022 SMART:SM00268
GeneTree:ENSGT00660000095557 EMBL:AADN02020808 EMBL:AADN02020809
IPI:IPI00822395 Ensembl:ENSGALT00000039568 ArrayExpress:E1BR36
Uniprot:E1BR36
Length = 379
Score = 234 (87.4 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 172 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 231
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 232 MPTVHYEFPNGYN 244
>UNIPROTKB|J9PAV6 [details] [associations]
symbol:ACTL6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524
PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190 SMART:SM00268 CTD:86
KO:K11340 GeneTree:ENSGT00660000095557 EMBL:AAEX03017257
EMBL:AAEX03017256 RefSeq:XP_003640180.1 Ensembl:ENSCAFT00000045416
GeneID:478637 KEGG:cfa:478637 Uniprot:J9PAV6
Length = 387
Score = 234 (87.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 180 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 239
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 240 MPTVHYEFPNGYN 252
>UNIPROTKB|E1BS78 [details] [associations]
symbol:ACTL6A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003407
"neural retina development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0043968
"histone H2A acetylation" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000
GO:GO:0005886 GO:GO:0005524 GO:GO:0003682 GO:GO:0006338
PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190 SMART:SM00268
OMA:DFGSERF GO:GO:0031011 GO:GO:0035267 GO:GO:0016514 GO:GO:0043968
GO:GO:0043967 GeneTree:ENSGT00660000095557 EMBL:AADN02020808
EMBL:AADN02020809 IPI:IPI00589760 Ensembl:ENSGALT00000014749
ArrayExpress:E1BS78 Uniprot:E1BS78
Length = 422
Score = 234 (87.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 215 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 274
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 275 MPTVHYEFPNGYN 287
>UNIPROTKB|A4IFJ8 [details] [associations]
symbol:ACTL6A "ACTL6A protein" species:9913 "Bos taurus"
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0043968 "histone H2A
acetylation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003407 "neural
retina development" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000
GO:GO:0005886 GO:GO:0005524 GO:GO:0007399 GO:GO:0003682
GO:GO:0006338 eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022
PRINTS:PR00190 SMART:SM00268 CTD:86 HOGENOM:HOG000233340
HOVERGEN:HBG003771 KO:K11340 OMA:DFGSERF OrthoDB:EOG4XKV6Z
GO:GO:0031011 GO:GO:0035267 GO:GO:0016514 GO:GO:0043968
GO:GO:0043967 GO:GO:0003407 GeneTree:ENSGT00660000095557
EMBL:DAAA02001958 EMBL:BC134613 IPI:IPI00692760
RefSeq:NP_001098505.1 UniGene:Bt.80045 STRING:A4IFJ8
Ensembl:ENSBTAT00000037228 GeneID:100125416 KEGG:bta:100125416
InParanoid:A4IFJ8 NextBio:20788830 Uniprot:A4IFJ8
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>UNIPROTKB|F1Q0F8 [details] [associations]
symbol:ACTL6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0043968 "histone H2A acetylation" evidence=IEA] [GO:0043967
"histone H4 acetylation" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003407 "neural retina development" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR004001 PROSITE:PS00432
InterPro:IPR004000 GO:GO:0005886 GO:GO:0005524 GO:GO:0007399
GO:GO:0003682 GO:GO:0006338 PANTHER:PTHR11937 Pfam:PF00022
PRINTS:PR00190 SMART:SM00268 OMA:DFGSERF GO:GO:0031011
GO:GO:0035267 GO:GO:0016514 GO:GO:0043968 GO:GO:0043967
GO:GO:0003407 GeneTree:ENSGT00660000095557 EMBL:AAEX03017257
EMBL:AAEX03017256 Ensembl:ENSCAFT00000018076 Uniprot:F1Q0F8
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>UNIPROTKB|O96019 [details] [associations]
symbol:ACTL6A "Actin-like protein 6A" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IDA] [GO:0043968 "histone H2A
acetylation" evidence=IDA] [GO:0043967 "histone H4 acetylation"
evidence=IDA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS;IDA] [GO:0031011 "Ino80
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006338 "chromatin remodeling"
evidence=IC;IDA] [GO:0003407 "neural retina development"
evidence=IEP] InterPro:IPR004001 PROSITE:PS00406 PROSITE:PS00432
InterPro:IPR004000 GO:GO:0005886 GO:GO:0005524 GO:GO:0007165
GO:GO:0007399 EMBL:CH471052 GO:GO:0006281 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0003713
eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 EMBL:AF041474 EMBL:AB015907 EMBL:AB060168
EMBL:AB061315 EMBL:AL136608 EMBL:AK021756 EMBL:BC000949
EMBL:BC001391 EMBL:BC036371 IPI:IPI00003627 IPI:IPI00216622
RefSeq:NP_004292.1 RefSeq:NP_817126.1 RefSeq:NP_829888.1
UniGene:Hs.435326 ProteinModelPortal:O96019 SMR:O96019
DIP:DIP-27565N IntAct:O96019 MINT:MINT-1136373 STRING:O96019
PhosphoSite:O96019 PaxDb:O96019 PeptideAtlas:O96019 PRIDE:O96019
DNASU:86 Ensembl:ENST00000392662 Ensembl:ENST00000429709
Ensembl:ENST00000450518 GeneID:86 KEGG:hsa:86 UCSC:uc003fjw.3
CTD:86 GeneCards:GC03P179280 HGNC:HGNC:24124 HPA:CAB012188
MIM:604958 neXtProt:NX_O96019 PharmGKB:PA134914203
HOGENOM:HOG000233340 HOVERGEN:HBG003771 InParanoid:O96019 KO:K11340
OMA:DFGSERF OrthoDB:EOG4XKV6Z PhylomeDB:O96019 ChiTaRS:ACTL6A
GenomeRNAi:86 NextBio:315 PMAP-CutDB:O96019 ArrayExpress:O96019
Bgee:O96019 CleanEx:HS_ACTL6A Genevestigator:O96019
GermOnline:ENSG00000136518 GO:GO:0031011 GO:GO:0071564
GO:GO:0035267 GO:GO:0016514 GO:GO:0006310 GO:GO:0043968
GO:GO:0043967 GO:GO:0003407 GO:GO:0040008 Uniprot:O96019
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>UNIPROTKB|Q4R333 [details] [associations]
symbol:ACTL6A "Actin-like protein 6A" species:9541 "Macaca
fascicularis" [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISS] [GO:0043967 "histone H4 acetylation" evidence=ISS]
[GO:0043968 "histone H2A acetylation" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] InterPro:IPR004001 PROSITE:PS00406
PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524 GO:GO:0007399
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 PANTHER:PTHR11937
Pfam:PF00022 PRINTS:PR00190 SMART:SM00268 HOVERGEN:HBG003771
GO:GO:0071564 GO:GO:0035267 GO:GO:0006310 GO:GO:0043968
GO:GO:0043967 GO:GO:0040008 EMBL:AB179435 Uniprot:Q4R333
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>MGI|MGI:1861453 [details] [associations]
symbol:Actl6a "actin-like 6A" species:10090 "Mus musculus"
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0031011 "Ino80 complex"
evidence=ISO] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=ISO] [GO:0043968
"histone H2A acetylation" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO;IDA] InterPro:IPR004001 PROSITE:PS00406
PROSITE:PS00432 InterPro:IPR004000 MGI:MGI:1861453 GO:GO:0005886
GO:GO:0005524 GO:GO:0007399 GO:GO:0006355 GO:GO:0006281
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 eggNOG:COG5277
PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190 SMART:SM00268 CTD:86
HOGENOM:HOG000233340 HOVERGEN:HBG003771 KO:K11340 OMA:DFGSERF
OrthoDB:EOG4XKV6Z GO:GO:0031011 GO:GO:0071564 GO:GO:0035267
GO:GO:0016514 GO:GO:0006310 GO:GO:0043968 GO:GO:0043967
GO:GO:0003407 GO:GO:0040008 EMBL:AF041476 EMBL:AK090154
EMBL:BC001994 IPI:IPI00323660 RefSeq:NP_062647.2 UniGene:Mm.41077
ProteinModelPortal:Q9Z2N8 SMR:Q9Z2N8 IntAct:Q9Z2N8 STRING:Q9Z2N8
PhosphoSite:Q9Z2N8 REPRODUCTION-2DPAGE:Q9Z2N8 PaxDb:Q9Z2N8
PRIDE:Q9Z2N8 Ensembl:ENSMUST00000029214 GeneID:56456 KEGG:mmu:56456
GeneTree:ENSGT00660000095557 InParanoid:Q9Z2N8 NextBio:312690
Bgee:Q9Z2N8 CleanEx:MM_ACTL6A Genevestigator:Q9Z2N8
GermOnline:ENSMUSG00000027671 Uniprot:Q9Z2N8
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>RGD|1307747 [details] [associations]
symbol:Actl6a "actin-like 6A" species:10116 "Rattus norvegicus"
[GO:0003407 "neural retina development" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0007399
"nervous system development" evidence=ISO] [GO:0016514 "SWI/SNF
complex" evidence=ISO] [GO:0031011 "Ino80 complex" evidence=ISO]
[GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISO]
[GO:0043967 "histone H4 acetylation" evidence=ISO] [GO:0043968
"histone H2A acetylation" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000
RGD:1307747 GO:GO:0005524 PANTHER:PTHR11937 Pfam:PF00022
PRINTS:PR00190 SMART:SM00268 CTD:86 HOVERGEN:HBG003771 KO:K11340
EMBL:BC098698 IPI:IPI00373181 RefSeq:NP_001034122.1
UniGene:Rn.31666 ProteinModelPortal:Q4KM87 PhosphoSite:Q4KM87
GeneID:361925 KEGG:rno:361925 UCSC:RGD:1307747 NextBio:678077
Genevestigator:Q4KM87 Uniprot:Q4KM87
Length = 429
Score = 234 (87.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KEA+++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>UNIPROTKB|F1SGC8 [details] [associations]
symbol:ACTL6A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071564 "npBAF complex" evidence=IEA] [GO:0043968
"histone H2A acetylation" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0035267 "NuA4 histone
acetyltransferase complex" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003407 "neural retina development" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR004001 PROSITE:PS00432
InterPro:IPR004000 GO:GO:0005886 GO:GO:0005524 GO:GO:0007399
GO:GO:0003682 GO:GO:0006338 PANTHER:PTHR11937 Pfam:PF00022
PRINTS:PR00190 SMART:SM00268 OMA:DFGSERF GO:GO:0031011
GO:GO:0035267 GO:GO:0016514 GO:GO:0043968 GO:GO:0043967
GO:GO:0003407 GeneTree:ENSGT00660000095557 EMBL:CU695053
EMBL:CU914224 Ensembl:ENSSSCT00000012873 Uniprot:F1SGC8
Length = 429
Score = 229 (85.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KE +++ P W RK+ LP+VT+SWHNY V+QDFQ SVLQVS++ +DE+
Sbjct: 222 MIASKEPVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYEFPNGY+
Sbjct: 282 MPTVHYEFPNGYN 294
>ZFIN|ZDB-GENE-020419-36 [details] [associations]
symbol:actl6a "actin-like 6A" species:7955 "Danio
rerio" [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR004001
PROSITE:PS00432 InterPro:IPR004000 ZFIN:ZDB-GENE-020419-36
GO:GO:0005524 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 CTD:86 HOVERGEN:HBG003771 KO:K11340 HSSP:P02568
EMBL:AY099520 IPI:IPI00498848 RefSeq:NP_775347.1 UniGene:Dr.76448
ProteinModelPortal:Q8JGS6 PRIDE:Q8JGS6 GeneID:192313
KEGG:dre:192313 InParanoid:Q8JGS6 NextBio:20797150
ArrayExpress:Q8JGS6 Bgee:Q8JGS6 Uniprot:Q8JGS6
Length = 429
Score = 228 (85.3 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 36/73 (49%), Positives = 54/73 (73%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +K+++++ P W +K+ LP+VT+SWHNY V+QDFQ SVLQVS++P+DE+
Sbjct: 222 MIASKDSVREGTPASWKKKEKLPQVTRSWHNYMCNTVIQDFQASVLQVSDSPYDEQVAAQ 281
Query: 61 LPPSHYEFPNGYH 73
+P HYE PNGY+
Sbjct: 282 MPTVHYELPNGYN 294
>ZFIN|ZDB-GENE-050522-191 [details] [associations]
symbol:actl6b "actin-like 6B" species:7955 "Danio
rerio" [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR004001
PROSITE:PS00432 InterPro:IPR004000 ZFIN:ZDB-GENE-050522-191
GO:GO:0005524 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 GeneTree:ENSGT00660000095557 EMBL:CU633916
EMBL:CU896563 IPI:IPI01024031 Ensembl:ENSDART00000148532
Bgee:F8W3Z2 Uniprot:F8W3Z2
Length = 426
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 1 MVGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
M+ +KE +++ P WT+K LP V++SWH + +V+QDFQ SVLQVS++P+DE+
Sbjct: 219 MIASKEPVREGAPAMWTKKDKLPPVSKSWHTFMCNEVIQDFQASVLQVSDSPYDEQVAAQ 278
Query: 61 LPPSHYEFPNGY 72
+P HYE P+GY
Sbjct: 279 MPTVHYEMPSGY 290
>FB|FBgn0025716 [details] [associations]
symbol:Bap55 "Brahma associated protein 55kD" species:7227
"Drosophila melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0035060 "brahma complex"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:2000637 "positive
regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR004000 EMBL:AE013599 GO:GO:0045893 GO:GO:0007067
GO:GO:0006338 GO:GO:0000910 GO:GO:0007517 eggNOG:COG5277
PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190 SMART:SM00268
OMA:DFGSERF GeneTree:ENSGT00660000095557 KO:K11652 GO:GO:2000637
GO:GO:0035060 GO:GO:0070983 HSSP:P02568 EMBL:AY070886
RefSeq:NP_611209.1 UniGene:Dm.1445 SMR:Q7K012 DIP:DIP-38883N
IntAct:Q7K012 STRING:Q7K012 EnsemblMetazoa:FBtr0086960 GeneID:36956
KEGG:dme:Dmel_CG6546 UCSC:CG6546-RA CTD:36956 FlyBase:FBgn0025716
InParanoid:Q7K012 OrthoDB:EOG4WSTRV GenomeRNAi:36956 NextBio:801217
Uniprot:Q7K012
Length = 425
Score = 208 (78.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 37/74 (50%), Positives = 55/74 (74%)
Query: 2 VGAKEAIKDKEPPKWTRKKNLPE-VTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILN 60
+ +K+ +K+++ ++T +K LPE +TQSW NY ++ ++QDFQ +VLQV E PFDE+
Sbjct: 228 IASKDVVKERDNGRFTLRK-LPENLTQSWQNYMLQLMMQDFQMNVLQVLENPFDERVAAQ 286
Query: 61 LPPSHYEFPNGYHQ 74
+P HYEFPNGYHQ
Sbjct: 287 IPTVHYEFPNGYHQ 300
>WB|WBGene00022774 [details] [associations]
symbol:swsn-6 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0007067 GO:GO:0002119
eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022 PRINTS:PR00190
SMART:SM00268 HOGENOM:HOG000233340 GeneTree:ENSGT00660000095557
KO:K11652 GO:GO:0040035 HSSP:P02577 OMA:ITITPHY EMBL:FO081368
RefSeq:NP_500801.2 ProteinModelPortal:Q9N4N4 SMR:Q9N4N4
STRING:Q9N4N4 PaxDb:Q9N4N4 EnsemblMetazoa:ZK616.4.1
EnsemblMetazoa:ZK616.4.2 GeneID:177325 KEGG:cel:CELE_ZK616.4
UCSC:ZK616.4.1 CTD:177325 WormBase:ZK616.4 InParanoid:Q9N4N4
NextBio:896274 Uniprot:Q9N4N4
Length = 436
Score = 166 (63.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 2 VGAKEAIKDKEPPKWTRKKNLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNL 61
+G KE + + E PKWT +KNLP+VT+S+ + K +++D ++LQ+ +T D + L
Sbjct: 229 IGGKEEVNEGEAPKWTPRKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKL 288
Query: 62 PPSHYEFPNGY 72
P + Y FPNGY
Sbjct: 289 PSTPYAFPNGY 299
>TAIR|locus:2014104 [details] [associations]
symbol:ARP4 "AT1G18450" species:3702 "Arabidopsis
thaliana" [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006325 "chromatin organization"
evidence=RCA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0048235
"pollen sperm cell differentiation" evidence=IMP] [GO:0048574
"long-day photoperiodism, flowering" evidence=IMP] [GO:0000003
"reproduction" evidence=RCA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009560 "embryo
sac egg cell differentiation" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009855 "determination of bilateral
symmetry" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010267 "production
of ta-siRNAs involved in RNA interference" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR004000 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0005730 GO:GO:0005856 GO:GO:0005200
GO:GO:0016568 eggNOG:COG5277 PANTHER:PTHR11937 Pfam:PF00022
SMART:SM00268 HOGENOM:HOG000233340 KO:K11340 PROSITE:PS01132
EMBL:AC013354 GO:GO:0006325 EMBL:AF507912 EMBL:BT006474
EMBL:AK228098 EMBL:AY087788 EMBL:BK000422 IPI:IPI00535368
PIR:C86318 RefSeq:NP_564051.1 UniGene:At.16658
ProteinModelPortal:Q84M92 SMR:Q84M92 STRING:Q84M92 PaxDb:Q84M92
PRIDE:Q84M92 EnsemblPlants:AT1G18450.1 GeneID:838425
KEGG:ath:AT1G18450 TAIR:At1g18450 InParanoid:Q84M92 OMA:NTTESYR
PhylomeDB:Q84M92 ProtClustDB:CLSN2687853 Genevestigator:Q84M92
GO:GO:0048574 GO:GO:0048235 Uniprot:Q84M92
Length = 441
Score = 115 (45.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 21 NLPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNG 71
++P+ T+S+ + + +V D + S+ +V +TP+D+KS N+P + YE P+G
Sbjct: 246 DIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTTSYELPDG 296
>POMBASE|SPAC23D3.09 [details] [associations]
symbol:arp42 "SWI/SNF and RSC complex subunit Arp42"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0010570 "regulation of filamentous growth" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0016586 "RSC
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
InterPro:IPR004001 PROSITE:PS00432 InterPro:IPR004000
PomBase:SPAC23D3.09 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0045944 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 eggNOG:COG5277 PANTHER:PTHR11937
Pfam:PF00022 SMART:SM00268 HOGENOM:HOG000233340 GO:GO:0016514
PIR:S62500 RefSeq:NP_594546.2 DIP:DIP-48384N STRING:Q09849
EnsemblFungi:SPAC23D3.09.1 GeneID:2541496 OrthoDB:EOG4NW2VB
NextBio:20802595 GO:GO:0016586 GO:GO:0010570 Uniprot:Q09849
Length = 424
Score = 103 (41.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 22 LPEVTQSWHNYSVKKVVQDFQQSVLQVSETPFDEKSILNLPPSHYEFPNG 71
+ ++T S+ + ++V++++++SVL V +TPFDE + P +EFP+G
Sbjct: 231 IQDLTSSYEIFQKRRVIEEWKESVLDVLDTPFDEAKASSRNPKPFEFPDG 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 88 88 0.00091 102 3 11 23 0.39 30
29 0.49 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 542 (58 KB)
Total size of DFA: 121 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.49u 0.14s 11.63t Elapsed: 00:00:00
Total cpu time: 11.49u 0.14s 11.63t Elapsed: 00:00:00
Start: Thu Aug 15 13:34:29 2013 End: Thu Aug 15 13:34:29 2013