Query psy3528
Match_columns 218
No_of_seqs 127 out of 1101
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 18:57:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 97.2 0.0048 1.6E-07 53.0 12.6 89 32-123 281-384 (403)
2 4dzg_A PLIG; lysozyme inhibito 92.0 0.12 4.3E-06 36.3 3.4 70 34-107 23-95 (114)
3 4g9s_B Inhibitor of G-type lys 88.7 2.1 7.3E-05 29.5 7.4 73 29-106 16-91 (111)
4 2d7n_A Filamin-C; beta-sandwic 87.6 1.6 5.6E-05 29.2 6.0 44 65-108 22-68 (93)
5 2ee9_A Filamin-B; beta-sandwic 87.0 0.82 2.8E-05 30.9 4.2 45 63-107 28-75 (95)
6 2p9r_A Alpha-2-M, alpha-2-macr 85.3 6.4 0.00022 26.3 10.5 59 49-107 15-85 (102)
7 2d7m_A Filamin-C; beta-sandwic 84.8 2 6.8E-05 29.7 5.5 45 63-107 42-89 (115)
8 2dmb_A Filamin-B; beta-sandwic 84.7 2.8 9.4E-05 29.6 6.3 45 63-107 41-88 (124)
9 3osv_A Flagellar basal-BODY RO 84.6 7.4 0.00025 27.8 8.7 56 51-107 24-90 (138)
10 3cnk_A Filamin-A; FLNA24, X-RA 84.2 3 0.0001 27.3 6.0 43 65-107 30-75 (89)
11 3c12_A FLGD, flagellar protein 83.1 9.8 0.00034 27.1 8.8 54 52-107 28-92 (138)
12 2dj4_A Filamin-B; beta-sandwic 81.9 2.8 9.7E-05 28.6 5.3 45 63-107 41-88 (108)
13 2ee6_A Filamin-B; beta-sandwic 81.3 4.3 0.00015 27.5 6.0 43 64-107 41-85 (105)
14 1v05_A Filamin C; actin-bindin 80.8 3.8 0.00013 27.2 5.5 44 64-107 36-82 (96)
15 3rgh_A Filamin-A; cell adhesio 79.5 3.9 0.00013 27.5 5.2 43 64-106 38-83 (100)
16 2dlg_A Filamin-B; beta-sandwic 79.3 1.2 4.1E-05 30.4 2.6 45 63-107 29-76 (102)
17 2bp3_A Filamin A; structural p 79.0 7 0.00024 25.9 6.4 42 64-106 36-79 (97)
18 2nqc_A Filamin-C; immunoglobul 78.8 7 0.00024 28.1 6.7 43 64-107 75-118 (138)
19 2k9u_A Gamma filamin; cytoskel 78.5 11 0.00037 26.1 7.5 57 50-107 34-92 (119)
20 3d33_A Domain of unknown funct 78.1 14 0.00048 25.4 8.0 55 50-107 37-96 (108)
21 2w0p_A Filamin-A; alternative 77.4 5.3 0.00018 26.4 5.4 41 66-107 35-77 (94)
22 2dmc_A Filamin-B; beta-sandwic 75.9 1 3.5E-05 31.5 1.4 59 49-107 29-90 (116)
23 2k8e_A UPF0339 protein YEGP; p 75.6 8.2 0.00028 27.5 6.2 63 47-109 11-91 (130)
24 2e9j_A Filamin-B; beta-sandwic 74.5 5.6 0.00019 27.6 5.0 58 50-107 39-99 (119)
25 2d7p_A Filamin-C; beta-sandwic 73.1 5.1 0.00017 27.6 4.5 42 66-107 42-86 (112)
26 3isy_A Bsupi, intracellular pr 72.9 20 0.00067 25.1 7.5 42 64-105 41-87 (120)
27 2dia_A Filamin-B; beta-sandwic 72.8 5.5 0.00019 27.3 4.6 44 64-107 41-87 (113)
28 2eea_A Filamin-B; beta-sandwic 72.5 7.8 0.00027 26.7 5.4 43 64-107 51-95 (115)
29 2dic_A Filamin-B; beta-sandwic 72.3 5.4 0.00019 27.0 4.4 41 66-107 43-85 (105)
30 4b7l_A Filamin-B; structural p 72.2 6.3 0.00021 32.9 5.6 76 32-107 249-334 (347)
31 3sd2_A Putative member of DUF3 71.8 19 0.00064 24.4 6.9 69 33-108 20-91 (101)
32 2k7p_A Filamin-A; IG-like, ABP 70.6 11 0.00037 28.4 6.2 43 64-107 127-171 (188)
33 2eec_A Filamin-B; beta-sandwic 67.5 8.8 0.0003 27.0 4.8 44 63-107 50-94 (125)
34 1qfh_A Protein (gelation facto 65.5 42 0.0014 25.4 9.3 42 65-107 135-179 (212)
35 3irp_X URO-adherence factor A; 65.4 9.4 0.00032 32.9 5.4 42 66-107 331-372 (429)
36 2k7q_A Filamin-A; IG-like, ABP 64.7 16 0.00056 27.3 6.2 43 64-107 127-171 (191)
37 1gl2_D Syntaxin 8, vesicle tra 63.6 22 0.00077 21.6 6.1 48 133-180 6-53 (65)
38 4fxk_A Complement C4 beta chai 61.3 56 0.0019 29.1 10.1 59 49-107 133-201 (656)
39 2di9_A Filamin-B; beta-sandwic 60.9 16 0.00055 25.7 5.2 42 65-107 62-105 (131)
40 3jqw_A COLH protein, collagena 60.1 41 0.0014 23.4 11.0 70 37-108 35-105 (121)
41 1wlh_A Gelation factor; ABP-12 58.4 22 0.00074 28.7 6.3 41 66-107 235-278 (311)
42 3hrz_A Cobra venom factor; ser 57.8 45 0.0015 30.0 8.7 58 50-107 118-182 (627)
43 2nps_D Syntaxin-6; vesicle fus 57.0 36 0.0012 21.8 6.4 49 133-181 16-64 (82)
44 3c75_A Amicyanin; copper prote 56.6 37 0.0013 23.7 6.5 16 88-103 103-118 (132)
45 2ds4_A Tripartite motif protei 55.3 24 0.00083 23.6 5.2 42 66-107 50-96 (113)
46 2di8_A Filamin-B; beta-sandwic 54.5 20 0.00069 24.4 4.7 42 65-107 42-85 (111)
47 1wmd_A Protease; alpha-beta hy 52.9 1E+02 0.0036 26.0 10.4 42 66-107 367-419 (434)
48 2hr0_A Complement C3 beta chai 52.3 1.2E+02 0.004 27.2 10.6 59 49-107 119-189 (645)
49 2k7p_A Filamin-A; IG-like, ABP 50.6 26 0.0009 26.2 5.2 43 65-107 34-79 (188)
50 2xwx_A GBPA, glcnac-binding pr 49.0 1.2E+02 0.0042 25.6 11.1 58 51-108 311-374 (391)
51 3hd7_B Syntaxin-1A; membrane p 48.5 61 0.0021 22.0 8.1 20 136-155 21-40 (109)
52 2dib_A Filamin-B; beta-sandwic 47.5 14 0.00047 25.8 2.9 43 65-107 57-102 (128)
53 3hd7_A Vesicle-associated memb 46.6 59 0.002 21.3 7.2 12 168-179 51-62 (91)
54 2k7q_A Filamin-A; IG-like, ABP 46.2 7.2 0.00025 29.4 1.3 45 63-107 29-76 (191)
55 4hci_A Cupredoxin 1; structura 45.7 38 0.0013 22.1 4.9 54 45-102 30-83 (100)
56 2d7o_A Filamin-C; beta-sandwic 44.5 10 0.00035 25.9 1.8 41 66-107 43-85 (111)
57 1sfc_D Protein (SNAP-25B), pro 43.9 64 0.0022 20.9 5.6 49 133-181 26-74 (87)
58 3e8v_A Possible transglutamina 43.6 38 0.0013 22.0 4.3 20 86-105 40-68 (82)
59 2j3s_A Filamin-A; cytoskeleton 42.2 64 0.0022 25.7 6.5 45 61-106 224-270 (288)
60 1n7s_D SNAP-25A; neuronal snar 42.0 57 0.0019 19.8 5.6 47 134-180 8-54 (66)
61 2j3s_A Filamin-A; cytoskeleton 41.8 19 0.00065 28.9 3.3 44 64-107 130-176 (288)
62 2x5p_A FBA2, fibronectin bindi 41.0 41 0.0014 23.4 4.5 53 66-120 44-97 (121)
63 2r5o_A Putative ATP binding co 41.0 67 0.0023 23.8 6.1 34 48-81 67-103 (188)
64 3gf8_A Putative polysaccharide 40.3 35 0.0012 27.7 4.6 65 41-105 3-82 (296)
65 3cu7_A Complement C5; Mg domai 33.8 1.1E+02 0.0037 31.0 7.9 59 50-108 138-207 (1676)
66 3prx_B Cobra venom factor; imm 33.6 1.6E+02 0.0053 30.0 8.9 42 66-107 160-204 (1642)
67 1qle_D Cytochrome AA3, ccytoch 33.4 63 0.0022 18.1 3.6 20 178-197 22-41 (43)
68 3afg_A Subtilisin-like serine 33.3 2.5E+02 0.0084 24.6 12.6 56 64-122 458-515 (539)
69 3pay_A Putative adhesin; struc 31.9 31 0.0011 28.2 3.1 63 43-105 6-82 (314)
70 1wlh_A Gelation factor; ABP-12 31.4 57 0.0019 26.2 4.6 43 65-107 143-188 (311)
71 2k49_A UPF0339 protein SO_3888 31.3 1.3E+02 0.0045 20.8 7.0 54 55-108 3-74 (118)
72 2b39_A C3; thioester, immune d 29.0 1.7E+02 0.0057 29.6 8.3 58 50-107 141-210 (1661)
73 1m56_D Cytochrome C oxidase; m 28.7 86 0.0029 18.3 3.8 20 178-197 30-49 (51)
74 1l4a_D S-SNAP25 fusion protein 28.3 1.2E+02 0.004 19.6 4.9 46 135-180 29-74 (87)
75 3rgh_A Filamin-A; cell adhesio 27.5 1.3E+02 0.0045 19.6 5.9 32 67-98 53-85 (100)
76 3bid_A UPF0339 protein NMB1088 27.2 80 0.0027 19.3 3.7 27 57-83 3-29 (64)
77 1iby_A Nitrosocyanin; RED copp 27.1 1.4E+02 0.0047 19.7 5.9 17 88-104 79-95 (112)
78 3ogl_Q JAZ1 incomplete degron 27.0 18 0.0006 17.1 0.4 11 200-210 8-18 (21)
79 1nqj_A Class 1 collagenase; be 26.0 1.6E+02 0.0056 20.2 8.2 67 38-107 38-107 (119)
80 1qfh_A Protein (gelation facto 25.8 79 0.0027 23.8 4.3 42 66-107 45-89 (212)
81 3b5n_D Protein transport prote 25.7 1.2E+02 0.004 18.5 6.0 46 135-180 9-54 (64)
82 2dmb_A Filamin-B; beta-sandwic 25.7 1E+02 0.0035 21.2 4.6 33 66-98 56-89 (124)
83 2akf_A Coronin-1A; coiled coil 22.8 87 0.003 15.9 4.4 16 140-155 3-18 (32)
84 2pz4_A Protein GBS052; SPAB, G 22.4 2.6E+02 0.009 21.3 7.1 40 66-105 145-199 (239)
85 2lsj_B DNA polymerase kappa; R 27.2 19 0.00067 17.8 0.0 13 201-213 5-17 (26)
86 2yko_A LINE-1 ORF1P; RNA-bindi 21.4 2.5E+02 0.0086 21.9 6.3 23 138-160 8-30 (233)
87 2pn5_A TEP1R, thioester-contai 20.6 6E+02 0.021 24.8 13.1 58 50-107 114-184 (1325)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=97.21 E-value=0.0048 Score=53.04 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=63.7
Q ss_pred EEEEeCCCcceEEEEcc-CCCEEEEEEEEEECCeeeEEEEEE-C----CC---C--cEEeeceecc----cceEEEEeec
Q psy3528 32 TFELADNARECFFEDIK-RNTSVILEFQVVTGGKYDVDVSIE-A----PT---K--EIIYRQVKSQ----FDTHQFVTLV 96 (218)
Q Consensus 32 ~~~l~~g~~~Cf~e~v~-~~~~i~~~y~v~~~~~~~i~v~v~-~----p~---g--~~v~~~~~~~----~g~f~f~~~~ 96 (218)
++.|.+|+...+-..+. +|..+...|.+.+ .+|.+.|+ . ++ | ..+....... -..-+|++.+
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~---~DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~G~~~~~~ 357 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDG---ADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLTCSD 357 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEESS---SCEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEecC---CcEEEEEEEecccccccCCCcceEEeeeeeecCccccccCEEEcCC
Confidence 38899999999988887 6999999998843 25666665 1 11 2 1232221111 1133678999
Q ss_pred ceeEEEEEEecCCCcceEEEEEEEEec
Q psy3528 97 EGTYVVCFSNEFSTYSHKVVYMDFQVG 123 (218)
Q Consensus 97 ~G~y~~Cf~n~~~~~~~k~V~f~~~~g 123 (218)
.|.|.++|+|++|.+.+|.|.+.+.+.
T Consensus 358 ~G~y~l~fdNs~S~~~~k~l~y~v~v~ 384 (403)
T 1olm_A 358 PGIYVLRFDNTYSFIHAKKVNFTVEVL 384 (403)
T ss_dssp CEEEEEEEECTTCCCCSEEEEEEEEEE
T ss_pred CeEEEEEEeccccceeceEEEEEEEEe
Confidence 999999999999877789999999874
No 2
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=92.02 E-value=0.12 Score=36.28 Aligned_cols=70 Identities=7% Similarity=-0.015 Sum_probs=49.3
Q ss_pred EEeCCCcceEEEEccCCCEEEEEEEEEECCeeeEEEEEECCCCcE---EeeceecccceEEEEeecceeEEEEEEec
Q psy3528 34 ELADNARECFFEDIKRNTSVILEFQVVTGGKYDVDVSIEAPTKEI---IYRQVKSQFDTHQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 34 ~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~---v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~ 107 (218)
.|.+++...+...+.+|+.+.+.. .... .+.+.|.+|+++. ++..+....+.++-+.+.+|+|++=+...
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l--s~~~--~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI--GGSS--NANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C--EEST--TCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EecCCCceEEEEEecCCCEEEEEe--CCCC--cEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 477788888888899999887777 3222 4678899999874 34333333457888999999999999765
No 3
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=88.70 E-value=2.1 Score=29.53 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=51.7
Q ss_pred eEEEEEEeCCCcceEEEEccCCCEEEEEEEEEECCeeeEEEEEECCCCcEEeec---eecccceEEEEeecceeEEEEEE
Q psy3528 29 VELTFELADNARECFFEDIKRNTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQ---VKSQFDTHQFVTLVEGTYVVCFS 105 (218)
Q Consensus 29 ~~l~~~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~---~~~~~g~f~f~~~~~G~y~~Cf~ 105 (218)
..+.=.|.+++...+...+.+|+.+.+... ++ ...+.|..|++...... ......++..+.+.+|+|++=+.
T Consensus 16 a~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l~--s~---~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~V~ 90 (111)
T 4g9s_B 16 AQYSGEIKGYDYDTYTFYAKKGQKVHVSIS--NE---GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVL 90 (111)
T ss_dssp EEEEEEEETTCCEEEEEEECTTCEEEEEES--CT---TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEEEE
T ss_pred eEEEEEEeCCCceEEEEEecCCCEEEEEEe--cC---CccEEEECCCCccccccccccccCCceEEEEecCCccEEEEEE
Confidence 345556888999999999999998877653 22 24566888876543221 12234568889999999999997
Q ss_pred e
Q psy3528 106 N 106 (218)
Q Consensus 106 n 106 (218)
.
T Consensus 91 ~ 91 (111)
T 4g9s_B 91 Q 91 (111)
T ss_dssp C
T ss_pred e
Confidence 4
No 4
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.63 E-value=1.6 Score=29.24 Aligned_cols=44 Identities=7% Similarity=0.064 Sum_probs=31.1
Q ss_pred eeEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEecC
Q psy3528 65 YDVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNEF 108 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~~ 108 (218)
.++.+.|.+|+|..+.-. .+...| ...|++.+.|.|.+++.-..
T Consensus 22 ~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g 68 (93)
T 2d7n_A 22 GELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDG 68 (93)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESS
T ss_pred CCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECC
Confidence 468999999999765321 122334 45678999999999997543
No 5
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.99 E-value=0.82 Score=30.94 Aligned_cols=45 Identities=11% Similarity=0.104 Sum_probs=31.5
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
+..++.+.|.+|+|..+.-. .+...| ...|++.+.|.|.+++.-.
T Consensus 28 g~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~ 75 (95)
T 2ee9_A 28 RKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYM 75 (95)
T ss_dssp CTTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEES
T ss_pred CCCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEEC
Confidence 34479999999999765322 122334 4567899999999999754
No 6
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=85.27 E-value=6.4 Score=26.27 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=38.9
Q ss_pred CCCEEEEEEEEEECC-----eeeEEEEEECCCCcEEeeceec--ccceE--EEEee---cceeEEEEEEec
Q psy3528 49 RNTSVILEFQVVTGG-----KYDVDVSIEAPTKEIIYRQVKS--QFDTH--QFVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 49 ~~~~i~~~y~v~~~~-----~~~i~v~v~~p~g~~v~~~~~~--~~g~f--~f~~~---~~G~y~~Cf~n~ 107 (218)
.|+.|.+..-+.+.+ ...+.+.+.||+|+.+.+.... ..|.+ +|..+ ..|.|++.....
T Consensus 15 PGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 15 PGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp TTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 477777766655421 2247899999999998774332 34544 44443 369999999864
No 7
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.83 E-value=2 Score=29.75 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=30.5
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
+...+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+.+.-.
T Consensus 42 G~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 89 (115)
T 2d7m_A 42 GEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYG 89 (115)
T ss_dssp CSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEES
T ss_pred CCCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEEC
Confidence 33468999999998644322 1223454 457889999999999754
No 8
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.65 E-value=2.8 Score=29.60 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=30.8
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
+...+.+.|.+|+|..+.-. .+...|. ..|++.+.|.|.+++.-.
T Consensus 41 G~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~ 88 (124)
T 2dmb_A 41 GKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFG 88 (124)
T ss_dssp CSCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEES
T ss_pred CCCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEEC
Confidence 33468899999998654322 1223454 568899999999999744
No 9
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=84.56 E-value=7.4 Score=27.84 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=39.1
Q ss_pred CEEEEEEEEEECCeeeEEEEEECCCCcEEeece--ecccceEEEE--e-------ecceeEEEEEEec
Q psy3528 51 TSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQV--KSQFDTHQFV--T-------LVEGTYVVCFSNE 107 (218)
Q Consensus 51 ~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~--~~~~g~f~f~--~-------~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+..+ ...+.+.|+|.+|+.++.-. ..+.|.+.|+ - -.+|.|.+-+.-.
T Consensus 24 ~~~~~~~~l~~~-a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 24 DTFKASLNLPVS-SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp SCEEEEEEESBC-EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CeEEEEEECCCC-CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 456778887654 45799999999999998743 2345655554 2 2368899988654
No 10
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=84.25 E-value=3 Score=27.28 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=27.6
Q ss_pred eeEEEEEECCCCcEEee-ceecccce--EEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYR-QVKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~-~~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|+|..+.- -.+...|. .+|++.+.|.|.+.+.-.
T Consensus 30 ~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 75 (89)
T 3cnk_A 30 NMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWG 75 (89)
T ss_dssp CCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEET
T ss_pred CcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEEC
Confidence 45788888998753211 11223344 457888999999988643
No 11
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=83.11 E-value=9.8 Score=27.13 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=37.3
Q ss_pred EEEEEEEEEECCeeeEEEEEECCCCcEEeece--ecccceEEEE--ee-------cceeEEEEEEec
Q psy3528 52 SVILEFQVVTGGKYDVDVSIEAPTKEIIYRQV--KSQFDTHQFV--TL-------VEGTYVVCFSNE 107 (218)
Q Consensus 52 ~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~--~~~~g~f~f~--~~-------~~G~y~~Cf~n~ 107 (218)
...+.|. .. ....+.+.|+|.+|++++.-. ..+.|.+.|. -. .+|.|.+.+.-.
T Consensus 28 ~~~~~~~-~~-~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 28 SAKGVVA-AT-SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp CEEEEEE-ES-SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred eEEEEEe-cC-CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 3566777 44 445799999999999997744 2445666665 22 368999999744
No 12
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=81.88 E-value=2.8 Score=28.61 Aligned_cols=45 Identities=22% Similarity=0.306 Sum_probs=30.6
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccceE--EEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFDTH--QFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g~f--~f~~~~~G~y~~Cf~n~ 107 (218)
+...+.+.|.+|+|..+.-. .+...|.| +|++.+.|.|.+.+.-.
T Consensus 41 G~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 88 (108)
T 2dj4_A 41 GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYA 88 (108)
T ss_dssp CSCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEES
T ss_pred CCceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 34468999999999655322 22334544 57788899999998744
No 13
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.28 E-value=4.3 Score=27.52 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=30.3
Q ss_pred eeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|++..+.- .+...| ..+|++.+.|.|.+.+.-.
T Consensus 41 ~~~l~v~v~~p~~~~v~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEITF-DDHKNGSCGVSYIAQEPGNYEVSIKFN 85 (105)
T ss_dssp CCCEEEEEESSSCEEEEE-CCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCEEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 346888899998865522 223334 5678899999999999743
No 14
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=80.84 E-value=3.8 Score=27.21 Aligned_cols=44 Identities=9% Similarity=0.055 Sum_probs=28.0
Q ss_pred eeeEEEEEECCCCcEEe-eceecccce--EEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIY-RQVKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~-~~~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|+|..+. +-.+...|. .+|++.+.|.|.+.+.-.
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 82 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWG 82 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEET
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 34688888999875321 111223444 457888899999888643
No 15
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=79.53 E-value=3.9 Score=27.53 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=28.2
Q ss_pred eeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEe
Q psy3528 64 KYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSN 106 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n 106 (218)
...+.+.|.+|+|..+.-. .+...|. .+|++...|.|.+.+.-
T Consensus 38 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~ 83 (100)
T 3rgh_A 38 SAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKY 83 (100)
T ss_dssp SCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEE
T ss_pred CceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEE
Confidence 3468889999988644321 1223454 46788888999888753
No 16
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=79.33 E-value=1.2 Score=30.44 Aligned_cols=45 Identities=16% Similarity=0.232 Sum_probs=31.4
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
+..++.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+.+.-.
T Consensus 29 g~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~ 76 (102)
T 2dlg_A 29 NSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYR 76 (102)
T ss_dssp CGGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESS
T ss_pred CCCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEEC
Confidence 34468999999999755332 1223454 467899999999999744
No 17
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=79.03 E-value=7 Score=25.92 Aligned_cols=42 Identities=19% Similarity=0.346 Sum_probs=28.2
Q ss_pred eeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEe
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSN 106 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n 106 (218)
...+.+.|.+|++..+.-. +...| ..+|++.+.|.|.+.+.-
T Consensus 36 ~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~ 79 (97)
T 2bp3_A 36 EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKY 79 (97)
T ss_dssp SEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEE
Confidence 3467888888887544222 23345 456788899999999864
No 18
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=78.84 E-value=7 Score=28.11 Aligned_cols=43 Identities=14% Similarity=0.288 Sum_probs=29.6
Q ss_pred eeeEEEEEECCCCcEEeeceecccc-eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD-THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g-~f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|++..+.-.+ ..+| ..+|++.+.|+|.+.+.-.
T Consensus 75 ~g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~ 118 (138)
T 2nqc_A 75 SGALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYG 118 (138)
T ss_dssp SCCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEES
T ss_pred CCcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEEC
Confidence 44689999999986553222 2233 4567888999999888633
No 19
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=78.47 E-value=11 Score=26.10 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=35.0
Q ss_pred CCEEEEEEEEEECCeeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
+....+..+..+.+...+.+.|.+|++..+.- .+...| ..+|++.+.|.|.+.+.-.
T Consensus 34 g~~~~F~v~t~dag~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 92 (119)
T 2k9u_A 34 GVPAEFSIWTREAGAGGLSIAVEGPSKAEIAF-EDRKDGSCGVSYVVQEPGDYEVSIKFN 92 (119)
T ss_dssp TCEEEEEEECCSSCSEEEEEEEESSSCCEEEE-ECCSSSEEEEEEECCSSEEEEEEEEET
T ss_pred CCeEEEEEEECCCCCCcEEEEEeCCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEEC
Confidence 44333333333334457889999998844321 223345 4568899999999999743
No 20
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=78.05 E-value=14 Score=25.36 Aligned_cols=55 Identities=9% Similarity=0.128 Sum_probs=39.4
Q ss_pred CCEEEEEEEEEECCeeeEEEEEE-CCCCcEEeeceeccc--ceEEEEe--ecceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGGKYDVDVSIE-APTKEIIYRQVKSQF--DTHQFVT--LVEGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~~~~i~v~v~-~p~g~~v~~~~~~~~--g~f~f~~--~~~G~y~~Cf~n~ 107 (218)
|..+.++|.. ...++.++|+ +.+|+++|++.-... ..+.+.. ..+|.|.+=+.+.
T Consensus 37 ~~~L~I~F~~---~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 37 GYLLTLKNAS---PDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp TTEEEEEESS---CCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred CCEEEEEECC---cCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 5677777722 2347999999 789999998754333 3455554 4689999999877
No 21
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=77.40 E-value=5.3 Score=26.40 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=27.3
Q ss_pred eEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|++..+.-. +...| ..+|++.+.|.|.+.+.-.
T Consensus 35 ~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFN 77 (94)
T ss_dssp CEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEET
T ss_pred cEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEEC
Confidence 46777788887544222 22334 4568889999999999743
No 22
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.92 E-value=1 Score=31.52 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=36.9
Q ss_pred CCCEEEEEEEEEECCeeeEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEec
Q psy3528 49 RNTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 49 ~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
.|....+.....+.+...+.+.|.+|+|..+--. .....| ..+|++.+.|.|.+.+.-.
T Consensus 29 vg~~~~f~v~~~~ag~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~ 90 (116)
T 2dmc_A 29 LGSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKN 90 (116)
T ss_dssp TTSCEEEECCCSCCCSTTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBS
T ss_pred cCCceEEEEEecCCCCCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEEC
Confidence 3444444443333344568999999999644221 122344 4578899999999999743
No 23
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=75.61 E-value=8.2 Score=27.53 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=44.8
Q ss_pred ccCCCEEEEEEEEEECCeeeEEEEEECCCCcEEeecee------------------cccceEEEEeecceeEEEEEEecC
Q psy3528 47 IKRNTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQVK------------------SQFDTHQFVTLVEGTYVVCFSNEF 108 (218)
Q Consensus 47 v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~~------------------~~~g~f~f~~~~~G~y~~Cf~n~~ 108 (218)
..+|....+.|++....+....+.++++||++|.+++. .....|.......|+|.|-+...+
T Consensus 11 ~~~~~~Mag~FEi~~~~~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~N 90 (130)
T 2k8e_A 11 FNQGVIMAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAAN 90 (130)
T ss_dssp ---CCCCCCEEEEEECTTCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTT
T ss_pred cCccceeeeeEEEEEcCCCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCC
Confidence 34566667889998765556899999999999976532 123567777778899988888765
Q ss_pred C
Q psy3528 109 S 109 (218)
Q Consensus 109 ~ 109 (218)
.
T Consensus 91 g 91 (130)
T 2k8e_A 91 H 91 (130)
T ss_dssp S
T ss_pred C
Confidence 3
No 24
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.45 E-value=5.6 Score=27.60 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=34.4
Q ss_pred CCEEEEEEEEEECCeeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
+....+..+..+.+...+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+.+.-.
T Consensus 39 g~~~~F~V~~~daG~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 99 (119)
T 2e9j_A 39 SLPVDFAIDARDAGEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYG 99 (119)
T ss_dssp TSCEEEEEEESSCCCCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEES
T ss_pred CCcEEEEEEECCCCCCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 333333333333344578999999998644221 1223454 457788899999888644
No 25
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=73.14 E-value=5.1 Score=27.65 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=29.3
Q ss_pred eEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|+|..+--. .....| ..+|++++.|.|.+.+.-.
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~ 86 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFN 86 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEES
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEEC
Confidence 68899999998754321 112234 4568899999999998744
No 26
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=72.85 E-value=20 Score=25.13 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=24.9
Q ss_pred eeeEEEEEECCCCcEEeeceecc-----cceEEEEeecceeEEEEEE
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQ-----FDTHQFVTLVEGTYVVCFS 105 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~-----~g~f~f~~~~~G~y~~Cf~ 105 (218)
+...++.|+|++|+.+|.+.... -+...+.+.+.=.|+.=++
T Consensus 41 gq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~ 87 (120)
T 3isy_A 41 GQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK 87 (120)
T ss_dssp SCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES
T ss_pred CCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC
Confidence 34678999999999999543211 2333444444445555555
No 27
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=72.83 E-value=5.5 Score=27.34 Aligned_cols=44 Identities=11% Similarity=0.113 Sum_probs=29.3
Q ss_pred eeeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+.+.-.
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 87 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYG 87 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEET
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEEC
Confidence 3468888888887544322 2233454 467889999999999743
No 28
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.55 E-value=7.8 Score=26.66 Aligned_cols=43 Identities=21% Similarity=0.374 Sum_probs=29.8
Q ss_pred eeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|++..+.- .+...| ..+|++.+.|+|.+.+.-.
T Consensus 51 ~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 95 (115)
T 2eea_A 51 EGGLDLAIEGPSKAEISC-IDNKDGTCTVTYLPTLPGDYSILVKYN 95 (115)
T ss_dssp SSCEEEEEESSSCCEECC-BCCSSSEEEEEEECSSCSCEEEEEEES
T ss_pred CCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 346888999998865422 223345 4568899999999998743
No 29
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=72.26 E-value=5.4 Score=27.02 Aligned_cols=41 Identities=15% Similarity=0.394 Sum_probs=27.8
Q ss_pred eEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|++..+.-. +...| ..+|++.+.|.|.+.+.-.
T Consensus 43 ~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2dic_A 43 GLGITVEGPSESKINCR-DNKDGSCSAEYIPFAPGDYDVNITYG 85 (105)
T ss_dssp CEEEEEESSSCCCCEEE-ECSSSCEEEEECCSSCEEEEEEEEET
T ss_pred ceEEEEECCCCCeEEEE-ECCCCeEEEEEEeCCCeEEEEEEEEC
Confidence 57788889987544222 23345 4567888899999999743
No 30
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=72.21 E-value=6.3 Score=32.94 Aligned_cols=76 Identities=17% Similarity=0.166 Sum_probs=45.8
Q ss_pred EEEEeCCCcceEEEEccC-----CCEEEEEEEEEECCeeeEEEEEECCCCcEEeec---eecccce--EEEEeecceeEE
Q psy3528 32 TFELADNARECFFEDIKR-----NTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQ---VKSQFDT--HQFVTLVEGTYV 101 (218)
Q Consensus 32 ~~~l~~g~~~Cf~e~v~~-----~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~---~~~~~g~--f~f~~~~~G~y~ 101 (218)
.-...|..-+|+.--+.. |....+.....+.|...+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.
T Consensus 249 ~~k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~~G~~~ 328 (347)
T 4b7l_A 249 KPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHK 328 (347)
T ss_dssp CCSCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTCSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCSSSEEE
T ss_pred cccccccceeEEeccccccCceeCCEEEEEEEeCCCCCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECCCEeEE
Confidence 334455555555554432 444444444444445579999999999765322 1223454 468899999999
Q ss_pred EEEEec
Q psy3528 102 VCFSNE 107 (218)
Q Consensus 102 ~Cf~n~ 107 (218)
+-+.-.
T Consensus 329 I~V~~~ 334 (347)
T 4b7l_A 329 VTVLFA 334 (347)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 988643
No 31
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=71.79 E-value=19 Score=24.44 Aligned_cols=69 Identities=13% Similarity=0.139 Sum_probs=45.2
Q ss_pred EEEeCCCcceEEEEccCCCEEEEEEEEEECCeeeEEEEEECC-CCcEEeeceecccceEEEE--eecceeEEEEEEecC
Q psy3528 33 FELADNARECFFEDIKRNTSVILEFQVVTGGKYDVDVSIEAP-TKEIIYRQVKSQFDTHQFV--TLVEGTYVVCFSNEF 108 (218)
Q Consensus 33 ~~l~~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p-~g~~v~~~~~~~~g~f~f~--~~~~G~y~~Cf~n~~ 108 (218)
+-+.|-.+.|.+.+ | .+.+.|.-. ...+.++|.|- +|+.+|+.....-...++. ...+|+|.+=+....
T Consensus 20 I~i~P~~~~~A~I~---n-vlsV~F~~~---~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~ 91 (101)
T 3sd2_A 20 IPIQPTYEKCAILS---N-ILNVSFGRA---KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILND 91 (101)
T ss_dssp CCCCCSSEEEEEET---T-EEEEEESSC---CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETT
T ss_pred eeecccccccEEEe---C-EEEEEeccC---CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCC
Confidence 44455555676654 3 777777322 33689999986 8999998754443445554 455899998887554
No 32
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=70.60 E-value=11 Score=28.41 Aligned_cols=43 Identities=19% Similarity=0.345 Sum_probs=30.5
Q ss_pred eeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|++..+.- .+...| ..+|++...|.|.+++.-.
T Consensus 127 ~g~l~v~I~gp~~~~~~~-~d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (188)
T 2k7p_A 127 EGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYN 171 (188)
T ss_dssp SSCEEEEEECSSCCEEEE-EECTTSEEEEEEECCSSEEEEEEEEET
T ss_pred CCCeEEEEeCCCCCeEEE-EECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence 346888899998855432 233446 5678899999999999743
No 33
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.54 E-value=8.8 Score=26.96 Aligned_cols=44 Identities=20% Similarity=0.358 Sum_probs=29.6
Q ss_pred CeeeEEEEEECCCCcEEeeceecccc-eEEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQVKSQFD-THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~~~~~~g-~f~f~~~~~G~y~~Cf~n~ 107 (218)
+...+.+.|.+|++..+--. +...| ..+|++.+.|+|.+.+.-.
T Consensus 50 G~~~l~v~i~gp~~~~~~~~-d~~dGy~V~Y~P~~~G~y~I~V~~~ 94 (125)
T 2eec_A 50 GPGTLSVTIEGPSKVKMDCQ-ETPEGYKVMYTPMAPGNYLISVKYG 94 (125)
T ss_dssp CSCCEEEEEESSSCCCCEEE-ECSSSEEEEECCSSCEEEEEEEEES
T ss_pred CCCcEEEEEECCCCCcceeE-ECCCCEEEEEEcCCCeEEEEEEEEC
Confidence 34468999999987544222 22344 4457788899999988743
No 34
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=65.48 E-value=42 Score=25.39 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=30.1
Q ss_pred eeEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|+| .+.-. .+...| ..+|++.+.|.|.+++.-.
T Consensus 135 ~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~ 179 (212)
T 1qfh_A 135 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 179 (212)
T ss_dssp CCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEET
T ss_pred CcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEEC
Confidence 468999999998 33211 233456 4578899999999999754
No 35
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=65.40 E-value=9.4 Score=32.92 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=36.2
Q ss_pred eEEEEEECCCCcEEeeceecccceEEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFDTHQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~ 107 (218)
++.|.+++++|.++....-...|.|.|.....|.|.+-|...
T Consensus 331 gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 331 GITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 688999999999887766667899999999999999998654
No 36
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=64.71 E-value=16 Score=27.33 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=29.9
Q ss_pred eeeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
...+.+.|.+|++..+.- .+...| ..+|++.+.|.|.+++.-.
T Consensus 127 ~g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~ 171 (191)
T 2k7q_A 127 YGGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFA 171 (191)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEET
T ss_pred CCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEEC
Confidence 346888888998754421 223445 5678899999999999744
No 37
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=63.60 E-value=22 Score=21.63 Aligned_cols=48 Identities=10% Similarity=0.007 Sum_probs=36.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhh
Q psy3528 133 EHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERV 180 (218)
Q Consensus 133 ~~~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv 180 (218)
+.++.|+.+...+.++...-..|-+|...+...-...-..++++..++
T Consensus 6 eqD~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l 53 (65)
T 1gl2_D 6 EQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 53 (65)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678899999999999999999998877766666666666666654
No 38
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=61.32 E-value=56 Score=29.07 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=39.1
Q ss_pred CCCEEEEEEEEEECC----eeeEEEEEECCCCcEEeeceec-ccceEE--EEee---cceeEEEEEEec
Q psy3528 49 RNTSVILEFQVVTGG----KYDVDVSIEAPTKEIIYRQVKS-QFDTHQ--FVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 49 ~~~~i~~~y~v~~~~----~~~i~v~v~~p~g~~v~~~~~~-~~g~f~--f~~~---~~G~y~~Cf~n~ 107 (218)
.|+.+.+..-+.+.+ ...+.+.|.||+|+.+.++... ..|-|. |..+ ..|.|++-+...
T Consensus 133 PGqtV~~r~i~~d~~~~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 133 PGQRVRYRVFALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFS 201 (656)
T ss_dssp TTCEEEEEEEEECSSSSBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEES
T ss_pred CCCEEEEEEEEECCccCcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEc
Confidence 478777666555432 3368899999999998765432 345444 4433 369999999754
No 39
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=60.86 E-value=16 Score=25.72 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=28.5
Q ss_pred eeEEEEEECCCCcEEeeceecccce--EEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQVKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|++..+.- .+...|. .+|++.+.|.|.+.+.-.
T Consensus 62 ~~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~ 105 (131)
T 2di9_A 62 GGLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFE 105 (131)
T ss_dssp SCEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEES
T ss_pred CeeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 35778888998754422 2233454 467889999999999743
No 40
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=60.06 E-value=41 Score=23.44 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=48.7
Q ss_pred CCCcceEEEEccCCCEEEEEEEEEECCeeeEEEEEECCCCcEEeecee-cccceEEEEeecceeEEEEEEecC
Q psy3528 37 DNARECFFEDIKRNTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQVK-SQFDTHQFVTLVEGTYVVCFSNEF 108 (218)
Q Consensus 37 ~g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~~-~~~g~f~f~~~~~G~y~~Cf~n~~ 108 (218)
......|..++++...|.+.+.-.. ..++...+++.+++.+..... ...-.-.|.+.++|.|-+.+..-.
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~--~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y~ 105 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLG--YGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMFN 105 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECS--SSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecC--CCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEec
Confidence 4568899999998888877776543 346888888877776644331 112223567778999999998643
No 41
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=58.45 E-value=22 Score=28.74 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=29.2
Q ss_pred eEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|+| .+.-. .+...|. .+|+....|.|.+++.-.
T Consensus 235 ~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~ 278 (311)
T 1wlh_A 235 KFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN 278 (311)
T ss_dssp CEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEET
T ss_pred cEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEEC
Confidence 47888889988 44221 2334565 578899999999999754
No 42
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=57.82 E-value=45 Score=30.04 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=34.7
Q ss_pred CCEEEEEEEEEECC----eeeEEEEEECCCCcEEeeceecccceEEEEee---cceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGG----KYDVDVSIEAPTKEIIYRQVKSQFDTHQFVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~----~~~i~v~v~~p~g~~v~~~~~~~~g~f~f~~~---~~G~y~~Cf~n~ 107 (218)
|+.+.+..-+.+.+ +..+.+.|.||+|+.+....-...-.++|..+ ..|.|++.+...
T Consensus 118 GqtV~~r~i~~d~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 118 GSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TCEECEEEEESCC-------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 56655554443321 23688999999999987533222123345433 369999999754
No 43
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=56.98 E-value=36 Score=21.83 Aligned_cols=49 Identities=8% Similarity=-0.039 Sum_probs=36.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhhH
Q psy3528 133 EHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVM 181 (218)
Q Consensus 133 ~~~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv~ 181 (218)
+.++.|+.|...+.++...-..|-+|...+...-...-..++++..++-
T Consensus 16 eQD~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 16 MQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566789999999999999999999988777666666666666666543
No 44
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=56.61 E-value=37 Score=23.73 Aligned_cols=16 Identities=13% Similarity=0.088 Sum_probs=10.6
Q ss_pred ceEEEEeecceeEEEE
Q psy3528 88 DTHQFVTLVEGTYVVC 103 (218)
Q Consensus 88 g~f~f~~~~~G~y~~C 103 (218)
..++++..+.|.|.+=
T Consensus 103 ~t~~~tF~~~G~y~y~ 118 (132)
T 3c75_A 103 QAYAITFNEAGSYDYF 118 (132)
T ss_dssp EEEEEEECSCEEEEEE
T ss_pred CEEEEEcCCCEEEEEE
Confidence 3456666788988753
No 45
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.30 E-value=24 Score=23.62 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=25.7
Q ss_pred eEEEEEECCCC--cEEe-eceecccce--EEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTK--EIIY-RQVKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g--~~v~-~~~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|++ ..+. +-.+...|. .+|++...|.|.+++.-.
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~ 96 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIK 96 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEES
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 57888888875 2221 111223344 457888899999988744
No 46
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=54.47 E-value=20 Score=24.37 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=28.3
Q ss_pred eeEEEEEECCCCcEEeeceecccc--eEEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQVKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|++..+.-. +...| ..+|++.+.|.|.+.+.-.
T Consensus 42 g~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (111)
T 2di8_A 42 GGISLAVEGPSKVDIQTE-DLEDGTCKVSYFPTVPGVYIVSTKFA 85 (111)
T ss_dssp CCEEEEEESSSCCCEECC-BCTTSCEEEEECCCSCSEEEEEEEES
T ss_pred CceEEEEEcCCCceEEEE-ECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 357888889987544222 23345 4567888999999998743
No 47
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=52.87 E-value=1e+02 Score=25.95 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=28.2
Q ss_pred eEEEEEECCCCcEEeecee-----------cccceEEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVK-----------SQFDTHQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~-----------~~~g~f~f~~~~~G~y~~Cf~n~ 107 (218)
++++.|++|+|..++.... ....+..+..+..|+|++-+...
T Consensus 367 dldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~~ 419 (434)
T 1wmd_A 367 DLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 419 (434)
T ss_dssp EEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred ccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEEE
Confidence 7999999999988652111 01123556667789999988644
No 48
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=52.33 E-value=1.2e+02 Score=27.16 Aligned_cols=59 Identities=19% Similarity=0.150 Sum_probs=38.3
Q ss_pred CCCEEEEEEEEEECC----eeeEEEEEECCCCcEEeeceec---ccceE--EEEee---cceeEEEEEEec
Q psy3528 49 RNTSVILEFQVVTGG----KYDVDVSIEAPTKEIIYRQVKS---QFDTH--QFVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 49 ~~~~i~~~y~v~~~~----~~~i~v~v~~p~g~~v~~~~~~---~~g~f--~f~~~---~~G~y~~Cf~n~ 107 (218)
.|+.|.+..-+.+.+ ...+.+.|.||+|+.+.+..-. ..|-+ +|..+ ..|.|++-+...
T Consensus 119 PGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTVNHKLLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEECTTSCBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEECCCCcccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 367666665554421 2368999999999998764322 34544 44443 369999999764
No 49
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=50.61 E-value=26 Score=26.18 Aligned_cols=43 Identities=7% Similarity=0.110 Sum_probs=30.7
Q ss_pred eeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|+|+...-. .+...|. ..|++.+.|.|++.+.-.
T Consensus 34 ~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~ 79 (188)
T 2k7p_A 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYD 79 (188)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEET
T ss_pred ceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEEC
Confidence 368899999999865322 1223454 568899999999999754
No 50
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=49.03 E-value=1.2e+02 Score=25.62 Aligned_cols=58 Identities=5% Similarity=0.046 Sum_probs=39.2
Q ss_pred CEEEEEEEEEECCeeeEEEEEECCCCcEEeece-ecccce-EEEEee----cceeEEEEEEecC
Q psy3528 51 TSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQV-KSQFDT-HQFVTL----VEGTYVVCFSNEF 108 (218)
Q Consensus 51 ~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~-~~~~g~-f~f~~~----~~G~y~~Cf~n~~ 108 (218)
..+.+.|.+...+...+..+|+|.+|+.+-... ....+. .+|+.. +.|.|.+=..-..
T Consensus 311 g~~~l~f~~~~~~~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~ 374 (391)
T 2xwx_A 311 QPIQLDLTLEAQGEMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKD 374 (391)
T ss_dssp SCCEEEEEEEEESSEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEE
T ss_pred CcEEEEEEEEecCceEEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEEC
Confidence 345566666655677899999999999886553 223333 555544 6899998887653
No 51
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=48.49 E-value=61 Score=21.98 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=10.2
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q psy3528 136 TVMTQMESSTQEIHKSLNTI 155 (218)
Q Consensus 136 ~~l~~l~~~l~~l~~~l~~i 155 (218)
.++.+++..+..|+....++
T Consensus 21 ~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 21 SEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555544443
No 52
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=47.47 E-value=14 Score=25.79 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=29.1
Q ss_pred eeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|++.+.-.
T Consensus 57 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~ 102 (128)
T 2dib_A 57 DHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYD 102 (128)
T ss_dssp SCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSS
T ss_pred ccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEEC
Confidence 368889999988643221 1223454 457889999999999744
No 53
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=46.63 E-value=59 Score=21.30 Aligned_cols=12 Identities=25% Similarity=0.241 Sum_probs=4.5
Q ss_pred hhHHHHHhhhhh
Q psy3528 168 QGRKRAEDLNER 179 (218)
Q Consensus 168 ~~~~~~est~~r 179 (218)
.++..+...+++
T Consensus 51 ~F~~~A~~l~rk 62 (91)
T 3hd7_A 51 QFETSAAKLKRK 62 (91)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 54
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=46.23 E-value=7.2 Score=29.37 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=31.4
Q ss_pred CeeeEEEEEECCCCcEEeec-eecccc--eEEEEeecceeEEEEEEec
Q psy3528 63 GKYDVDVSIEAPTKEIIYRQ-VKSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 63 ~~~~i~v~v~~p~g~~v~~~-~~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
+...+.+.|.+|+|..+.-. .....| ...|++.+.|.|.+-+...
T Consensus 29 ~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~ 76 (191)
T 2k7q_A 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKN 76 (191)
T ss_dssp CSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEET
T ss_pred CCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEEC
Confidence 34468999999999755322 122334 4568899999999888754
No 55
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=45.69 E-value=38 Score=22.11 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=27.3
Q ss_pred EEccCCCEEEEEEEEEECCeeeEEEEEECCCCcEEeeceecccceEEEEeecceeEEE
Q psy3528 45 EDIKRNTSVILEFQVVTGGKYDVDVSIEAPTKEIIYRQVKSQFDTHQFVTLVEGTYVV 102 (218)
Q Consensus 45 e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g~~v~~~~~~~~g~f~f~~~~~G~y~~ 102 (218)
..++.|+.+.+.+.-.++... .+.+.+...+.... ......+.|++.+.|.|.+
T Consensus 30 i~v~~G~tV~~~~~n~d~~~H--~~~~~~~~~~~~~~--pg~~~~~~~t~~~~G~Y~y 83 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKSEH--TFTIKKLGIDVVVE--SGKEKNITVKPKSAGTYEL 83 (100)
T ss_dssp EEECTTSCEEEEEEECSSSCE--EEEEGGGTEEEEEC--TTCEEEEEECCCSCEEEEE
T ss_pred EEECCCCEEEEEEEcCCCceE--EEEEecCCcceeec--CCcceeEEEecccCceEEE
Confidence 356678877655432221112 23333322222111 1233567888889999975
No 56
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=44.53 E-value=10 Score=25.93 Aligned_cols=41 Identities=17% Similarity=0.324 Sum_probs=27.5
Q ss_pred eEEEEEECCCCcEEeeceecccce--EEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|++..+.- .+...|. .+|++.+.|.|.+.+.-.
T Consensus 43 ~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~ 85 (111)
T 2d7o_A 43 GLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFD 85 (111)
T ss_dssp CBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBS
T ss_pred cEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 5678888998654321 2233454 567888999999999643
No 57
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=43.94 E-value=64 Score=20.90 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=37.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhhH
Q psy3528 133 EHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVM 181 (218)
Q Consensus 133 ~~~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv~ 181 (218)
+.++.|+.|...+.+++..-..|-.|...+...-.+.-..++++..++-
T Consensus 26 eqD~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 26 EMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3456788899999999999989988888777666666666666666653
No 58
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=43.64 E-value=38 Score=21.98 Aligned_cols=20 Identities=5% Similarity=0.022 Sum_probs=13.4
Q ss_pred ccceEEEEe---------ecceeEEEEEE
Q psy3528 86 QFDTHQFVT---------LVEGTYVVCFS 105 (218)
Q Consensus 86 ~~g~f~f~~---------~~~G~y~~Cf~ 105 (218)
..|.++|++ +.+|.|-+---
T Consensus 40 ~~G~~s~~~G~Gd~~v~A~k~G~~g~a~l 68 (82)
T 3e8v_A 40 RSGHASLTAGKGDMLVWASKDGRFGYSKL 68 (82)
T ss_dssp TTSEEEEECCSEEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEEcCCceEEEeccCCEEEEEEe
Confidence 457777776 77787766543
No 59
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=42.23 E-value=64 Score=25.70 Aligned_cols=45 Identities=20% Similarity=0.272 Sum_probs=30.1
Q ss_pred ECCeeeEEEEEECCCCcEEeeceecccce--EEEEeecceeEEEEEEe
Q psy3528 61 TGGKYDVDVSIEAPTKEIIYRQVKSQFDT--HQFVTLVEGTYVVCFSN 106 (218)
Q Consensus 61 ~~~~~~i~v~v~~p~g~~v~~~~~~~~g~--f~f~~~~~G~y~~Cf~n 106 (218)
+.+...+.+.|.+|.+..+.- .+...|. .+|++.+.|.|.+++.-
T Consensus 224 dag~g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~ 270 (288)
T 2j3s_A 224 EAGAGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKF 270 (288)
T ss_dssp BSSSEEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEE
T ss_pred CCCCCceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEE
Confidence 334456888899997754422 2334454 47888899999999864
No 60
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=42.00 E-value=57 Score=19.78 Aligned_cols=47 Identities=6% Similarity=0.005 Sum_probs=35.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhh
Q psy3528 134 HVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERV 180 (218)
Q Consensus 134 ~~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv 180 (218)
..+.|+.+...+.+++..-..|-.|...+...-.+.-..++++..++
T Consensus 8 qD~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l 54 (66)
T 1n7s_D 8 MDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRI 54 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34678889999999999998998888777766666666666666655
No 61
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=41.80 E-value=19 Score=28.88 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=29.5
Q ss_pred eeeEEEEEECCCCcEEeece-ecccc--eEEEEeecceeEEEEEEec
Q psy3528 64 KYDVDVSIEAPTKEIIYRQV-KSQFD--THQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~-~~~~g--~f~f~~~~~G~y~~Cf~n~ 107 (218)
..++.+.|.+|+|..+.-.- ....| ..+|++.+.|.|.+|+.-.
T Consensus 130 ~~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~ 176 (288)
T 2j3s_A 130 IQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYK 176 (288)
T ss_dssp CCCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEET
T ss_pred cCceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEEC
Confidence 34688999999998664321 11223 4568899999999998643
No 62
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=40.98 E-value=41 Score=23.42 Aligned_cols=53 Identities=8% Similarity=0.022 Sum_probs=35.7
Q ss_pred eEEEEEECCCCcEEeeceecccceEEEEeecceeEEEEEEecCC-CcceEEEEEEE
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFDTHQFVTLVEGTYVVCFSNEFS-TYSHKVVYMDF 120 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g~f~f~~~~~G~y~~Cf~n~~~-~~~~k~V~f~~ 120 (218)
+..|.+++.+|+.+... ...|.+.|.--..|.|.+.=...-. ..-...+.|.+
T Consensus 44 GA~F~l~~~~g~~v~~~--~sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV 97 (121)
T 2x5p_A 44 GATMELRDSSGKTISTW--ISDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTV 97 (121)
T ss_dssp CCEEEEECTTSCEEEEE--ECCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEE
T ss_pred CCEEEEEECCCCEEEEE--EeCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEE
Confidence 57889999999987544 3468888888889999887654321 11123455655
No 63
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=40.96 E-value=67 Score=23.80 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=22.1
Q ss_pred cCCCEEEEEEEEEEC---CeeeEEEEEECCCCcEEee
Q psy3528 48 KRNTSVILEFQVVTG---GKYDVDVSIEAPTKEIIYR 81 (218)
Q Consensus 48 ~~~~~i~~~y~v~~~---~~~~i~v~v~~p~g~~v~~ 81 (218)
..|+.+.+.+.+.-. ....+.+.|++..|..++.
T Consensus 67 ~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g 103 (188)
T 2r5o_A 67 TGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYG 103 (188)
T ss_dssp ETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEE
T ss_pred eCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEe
Confidence 345655555544322 2346889999999998875
No 64
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.31 E-value=35 Score=27.66 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=32.2
Q ss_pred ce--EEEEccC-CCEEEEEEEEEEC--C-----eeeEEEEEECCCCcEEeeceec----ccceEEEEe-ecceeEEEEEE
Q psy3528 41 EC--FFEDIKR-NTSVILEFQVVTG--G-----KYDVDVSIEAPTKEIIYRQVKS----QFDTHQFVT-LVEGTYVVCFS 105 (218)
Q Consensus 41 ~C--f~e~v~~-~~~i~~~y~v~~~--~-----~~~i~v~v~~p~g~~v~~~~~~----~~g~f~f~~-~~~G~y~~Cf~ 105 (218)
-| ++|+.+. ...+.+.|.-.-. + -..|++.|.|.+|+.+.+.... ..+.+.... -..|.|++=..
T Consensus 3 sCd~I~edl~dC~~~l~F~Ydyn~~~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaW 82 (296)
T 3gf8_A 3 SCDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAW 82 (296)
T ss_dssp ----------CCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEE
T ss_pred CCccCCcCccCCCCEEEEEEecCCCcccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEE
Confidence 47 7887764 3355555543211 1 2379999999999988764322 123333332 23588887554
No 65
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=33.76 E-value=1.1e+02 Score=31.02 Aligned_cols=59 Identities=10% Similarity=0.061 Sum_probs=37.8
Q ss_pred CCEEEEEEEEEECC----eeeEEEEEECCCCcEEeeceec-ccceEE---EEee---cceeEEEEEEecC
Q psy3528 50 NTSVILEFQVVTGG----KYDVDVSIEAPTKEIIYRQVKS-QFDTHQ---FVTL---VEGTYVVCFSNEF 108 (218)
Q Consensus 50 ~~~i~~~y~v~~~~----~~~i~v~v~~p~g~~v~~~~~~-~~g~f~---f~~~---~~G~y~~Cf~n~~ 108 (218)
|+.|.+..-+.+.+ ...+.+.|.||+|+.+.++... ..|-++ |..+ ..|.|++=+....
T Consensus 138 GqtV~~r~i~~d~~~~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 138 DQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TCEECEEEEEECTTCSCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCEEEEEEEEECCCCcccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 56665554444322 2368899999999998766432 345544 3433 3699999997643
No 66
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=33.64 E-value=1.6e+02 Score=29.97 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=28.9
Q ss_pred eEEEEEECCCCcEEeeceecccceEEEEee---cceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQVKSQFDTHQFVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~~~~~~g~f~f~~~---~~G~y~~Cf~n~ 107 (218)
.+.+.|.||+|+.+.++.-...-..+|..+ ..|.|++.....
T Consensus 160 ~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 160 TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp CEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred eEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 588999999999998754222223455544 369999998743
No 67
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=33.39 E-value=63 Score=18.13 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=12.8
Q ss_pred hhhHHhHhHHHHHHHhhhhh
Q psy3528 178 ERVMWWSSIEFVVVLLASTL 197 (218)
Q Consensus 178 ~rv~~~sii~i~vli~~~~~ 197 (218)
+...|.+++-+++++.++++
T Consensus 22 ~~~k~gt~~~~~~ll~maif 41 (43)
T 1qle_D 22 KGATWVSILSIAVLVFLALA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777766653
No 68
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=33.26 E-value=2.5e+02 Score=24.60 Aligned_cols=56 Identities=13% Similarity=0.175 Sum_probs=38.3
Q ss_pred eeeEEEEEECCCCcEEeeceec--ccceEEEEeecceeEEEEEEecCCCcceEEEEEEEEe
Q psy3528 64 KYDVDVSIEAPTKEIIYRQVKS--QFDTHQFVTLVEGTYVVCFSNEFSTYSHKVVYMDFQV 122 (218)
Q Consensus 64 ~~~i~v~v~~p~g~~v~~~~~~--~~g~f~f~~~~~G~y~~Cf~n~~~~~~~k~V~f~~~~ 122 (218)
..++++.|++|+|+.+...... ...+..+..+..|+|.+-+.....+ ..+.|++.+
T Consensus 458 ~~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~~s---g~y~~~l~~ 515 (539)
T 3afg_A 458 GSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS---ANYQVDVVS 515 (539)
T ss_dssp TCEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEESC---EEEEEEEEE
T ss_pred CCCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEeccCC---ceEEEEEEE
Confidence 3479999999999987543221 1234568888999999999865432 345566654
No 69
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=31.94 E-value=31 Score=28.23 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=35.4
Q ss_pred EEEEccC-CCEEEEEEEEEECC-------eeeEEEEEECCCCcEEeeceecc---cceEEEEee---cceeEEEEEE
Q psy3528 43 FFEDIKR-NTSVILEFQVVTGG-------KYDVDVSIEAPTKEIIYRQVKSQ---FDTHQFVTL---VEGTYVVCFS 105 (218)
Q Consensus 43 f~e~v~~-~~~i~~~y~v~~~~-------~~~i~v~v~~p~g~~v~~~~~~~---~g~f~f~~~---~~G~y~~Cf~ 105 (218)
++|+.+. ...+.+.|...... -..|++.|.|.+|+.+.+..... .+.+....+ ..|.|++=..
T Consensus 6 I~eDl~dC~~~L~F~Ydyn~~~~d~f~~~V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~~m~l~~~l~~G~Y~~VaW 82 (314)
T 3pay_A 6 IREDLPRCELWLEFVFDYNMEYADAFNPQVKSVDVLVFDSDDKLLFTKSVKVAALVGGNRMSLTDELDFGSYKVLTV 82 (314)
T ss_dssp SCSSSCCCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEEGGGSBTTTEEECTTTCCSEEEEEEEE
T ss_pred cccCccCCCCeEEEEEecCCCcccchhcccCEEEEEEEcCCCCEEEEEecchhhccCCceEecCCcCCCCcEEEEEE
Confidence 5555543 23666665332211 23799999999999987643221 111244433 3688876554
No 70
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=31.37 E-value=57 Score=26.19 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=29.5
Q ss_pred eeEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 65 YDVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 65 ~~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
..+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+++.-.
T Consensus 143 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~ 188 (311)
T 1wlh_A 143 DPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 188 (311)
T ss_dssp CCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEET
T ss_pred CcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEEC
Confidence 368899999998643221 1223354 567899999999999754
No 71
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=31.26 E-value=1.3e+02 Score=20.78 Aligned_cols=54 Identities=6% Similarity=-0.079 Sum_probs=36.2
Q ss_pred EEEEEEECCeeeEEEEEECCCCcEEeecee------------------cccceEEEEeecceeEEEEEEecC
Q psy3528 55 LEFQVVTGGKYDVDVSIEAPTKEIIYRQVK------------------SQFDTHQFVTLVEGTYVVCFSNEF 108 (218)
Q Consensus 55 ~~y~v~~~~~~~i~v~v~~p~g~~v~~~~~------------------~~~g~f~f~~~~~G~y~~Cf~n~~ 108 (218)
+.|++-...+....+.++.+||++|.+++. .....|.......|.|.|=+...+
T Consensus 3 g~FEi~~~~~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~N 74 (118)
T 2k49_A 3 GWYELSKSSNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAAN 74 (118)
T ss_dssp CEEEEEECTTSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTT
T ss_pred ceEEEEEcCCCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCC
Confidence 467776654445789999999999976432 113457777777788777665443
No 72
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=29.00 E-value=1.7e+02 Score=29.65 Aligned_cols=58 Identities=22% Similarity=0.225 Sum_probs=36.2
Q ss_pred CCEEEEEEEEEECC----eeeEEEEEECCCCcEEeeceec---ccce--EEEEeec---ceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGG----KYDVDVSIEAPTKEIIYRQVKS---QFDT--HQFVTLV---EGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~----~~~i~v~v~~p~g~~v~~~~~~---~~g~--f~f~~~~---~G~y~~Cf~n~ 107 (218)
|+.|.+..-+.+.+ ...+.+.|.||+|+.+.+..-. ..|- ++|..++ .|.|++=+...
T Consensus 141 GqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 141 GSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TSEEEEEEEEECTTSCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 45555444443321 2368999999999998764333 2353 4555443 69999998743
No 73
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=28.74 E-value=86 Score=18.29 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=12.6
Q ss_pred hhhHHhHhHHHHHHHhhhhh
Q psy3528 178 ERVMWWSSIEFVVVLLASTL 197 (218)
Q Consensus 178 ~rv~~~sii~i~vli~~~~~ 197 (218)
+...|.+++-+++++.++++
T Consensus 30 ~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 30 RMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44566666777777666654
No 74
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=28.29 E-value=1.2e+02 Score=19.63 Aligned_cols=46 Identities=11% Similarity=0.083 Sum_probs=34.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhh
Q psy3528 135 VTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERV 180 (218)
Q Consensus 135 ~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv 180 (218)
++.|+.|...+.+|...-..|-.|..-+...-.+.-..++++..++
T Consensus 29 D~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 29 ENNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888888888888887777666666666666666665
No 75
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=27.52 E-value=1.3e+02 Score=19.62 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=13.6
Q ss_pred EEEEEECC-CCcEEeeceecccceEEEEeecce
Q psy3528 67 VDVSIEAP-TKEIIYRQVKSQFDTHQFVTLVEG 98 (218)
Q Consensus 67 i~v~v~~p-~g~~v~~~~~~~~g~f~f~~~~~G 98 (218)
+.+.|.|. +|....+......|.|.....-.|
T Consensus 53 ~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 53 AEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGG 85 (100)
T ss_dssp CEEEEEECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred eEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 44444443 343333333333455555544444
No 76
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=27.24 E-value=80 Score=19.30 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=16.3
Q ss_pred EEEEECCeeeEEEEEECCCCcEEeece
Q psy3528 57 FQVVTGGKYDVDVSIEAPTKEIIYRQV 83 (218)
Q Consensus 57 y~v~~~~~~~i~v~v~~p~g~~v~~~~ 83 (218)
|++-...+....+.++++||++|.+++
T Consensus 3 Fei~~~~~G~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 3 FEIYKDAKGEYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEECC
T ss_pred EEEEECCCCCEEEEEEeCCCCEEEECC
Confidence 444443333467777788887776543
No 77
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=27.07 E-value=1.4e+02 Score=19.66 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=12.3
Q ss_pred ceEEEEeecceeEEEEE
Q psy3528 88 DTHQFVTLVEGTYVVCF 104 (218)
Q Consensus 88 g~f~f~~~~~G~y~~Cf 104 (218)
..+.|++.+.|.|.+--
T Consensus 79 ~~~~f~~~~~G~y~~~C 95 (112)
T 1iby_A 79 KTISFTADKAGAFTIWC 95 (112)
T ss_dssp EEEEEECCSCEEEEEBC
T ss_pred EEEEEECCCCEEEEEEC
Confidence 45777778889887644
No 78
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=27.03 E-value=18 Score=17.15 Aligned_cols=11 Identities=18% Similarity=0.404 Sum_probs=7.9
Q ss_pred HHHHhhhcccc
Q psy3528 200 YIVKNFFASRN 210 (218)
Q Consensus 200 ~~lk~fF~~Kk 210 (218)
..|.+||+++|
T Consensus 8 ~SLqRFleKRk 18 (21)
T 3ogl_Q 8 ASLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHHhh
Confidence 35778888765
No 79
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=26.02 E-value=1.6e+02 Score=20.24 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=41.8
Q ss_pred CCcceEEEEccCCCEEEEEEEEEECCeeeEEEEEECCCC--cEEeecee-cccceEEEEeecceeEEEEEEec
Q psy3528 38 NARECFFEDIKRNTSVILEFQVVTGGKYDVDVSIEAPTK--EIIYRQVK-SQFDTHQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 38 g~~~Cf~e~v~~~~~i~~~y~v~~~~~~~i~v~v~~p~g--~~v~~~~~-~~~g~f~f~~~~~G~y~~Cf~n~ 107 (218)
.....|..++++...|.+++.-..+ .+++..+++.++ +.+-.... ...-.-+|.+. +|.|-+.+..-
T Consensus 38 D~~D~y~f~v~~~g~v~I~l~~~~~--~~~~w~ly~~~dl~nyv~y~~~~gn~~~~~~~~~-pGkYYl~Vy~y 107 (119)
T 1nqj_A 38 DSRDYYSFEVKEEGEVNIELDKKDE--FGVTWTLHPESNINDRITYGQVDGNKVSNKVKLR-PGKYYLLVYKY 107 (119)
T ss_dssp CCEEEEEEEESSCEEEEEEEEESSS--SEEEEEEEECC----CCEECEEETTEEEEEEEEC-SEEEEEEEEEE
T ss_pred CCcEEEEEECCCCCeEEEEEEeCCC--CCEEEEEEccCCCccceEEeecCCCcEEEEEEcC-CcEEEEEEEEe
Confidence 4578888888888888777765543 457888888766 54432211 11112245565 99999999764
No 80
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=25.83 E-value=79 Score=23.78 Aligned_cols=42 Identities=21% Similarity=0.299 Sum_probs=28.0
Q ss_pred eEEEEEECCCCcEEeec-eecccce--EEEEeecceeEEEEEEec
Q psy3528 66 DVDVSIEAPTKEIIYRQ-VKSQFDT--HQFVTLVEGTYVVCFSNE 107 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~~~-~~~~~g~--f~f~~~~~G~y~~Cf~n~ 107 (218)
.+.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+-+.-.
T Consensus 45 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~ 89 (212)
T 1qfh_A 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLR 89 (212)
T ss_dssp CEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEET
T ss_pred eEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEEC
Confidence 58888889988644322 1223454 457788899999888643
No 81
>3b5n_D Protein transport protein SEC9; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae}
Probab=25.74 E-value=1.2e+02 Score=18.45 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=36.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhh
Q psy3528 135 VTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERV 180 (218)
Q Consensus 135 ~~~l~~l~~~l~~l~~~l~~i~~eq~~~~~re~~~~~~~est~~rv 180 (218)
.+.|+.+...+.++...-..+-.|...+..+-.+.-..++.+..++
T Consensus 9 D~nLd~l~~~~~rlk~ma~~mg~Eid~QN~~ldrI~~k~d~~d~ri 54 (64)
T 3b5n_D 9 DRNLDQIQQVSNRLKKMALTTGKELDSQQKRLNNIEESTDDLDINL 54 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888889999999888898888887777777766677766665
No 82
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=25.66 E-value=1e+02 Score=21.18 Aligned_cols=33 Identities=6% Similarity=-0.046 Sum_probs=15.5
Q ss_pred eEEEEEECC-CCcEEeeceecccceEEEEeecce
Q psy3528 66 DVDVSIEAP-TKEIIYRQVKSQFDTHQFVTLVEG 98 (218)
Q Consensus 66 ~i~v~v~~p-~g~~v~~~~~~~~g~f~f~~~~~G 98 (218)
.+...|.|. +|...........|.|.....-.|
T Consensus 56 ~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g 89 (124)
T 2dmb_A 56 EAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGG 89 (124)
T ss_dssp BCCCEEEECTTSCEEEEEECSSCEEEEEEEEESS
T ss_pred EEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECC
Confidence 344455543 444443333334455655555444
No 83
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=22.80 E-value=87 Score=15.93 Aligned_cols=16 Identities=6% Similarity=0.380 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3528 140 QMESSTQEIHKSLNTI 155 (218)
Q Consensus 140 ~l~~~l~~l~~~l~~i 155 (218)
.+++.+.+++.-++.+
T Consensus 3 rlee~~r~l~~ivq~l 18 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKL 18 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4566666666655544
No 84
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=22.36 E-value=2.6e+02 Score=21.34 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=26.2
Q ss_pred eEEEEEECCCCcEEe---------------eceecccceEEEEeecceeEEEEEE
Q psy3528 66 DVDVSIEAPTKEIIY---------------RQVKSQFDTHQFVTLVEGTYVVCFS 105 (218)
Q Consensus 66 ~i~v~v~~p~g~~v~---------------~~~~~~~g~f~f~~~~~G~y~~Cf~ 105 (218)
+..|.|++.+|+.+. ...-...|.+.|.--..|.|.+==.
T Consensus 145 GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~Et 199 (239)
T 2pz4_A 145 GVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEI 199 (239)
T ss_dssp SCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEEE
T ss_pred CCEEEEEeCCCCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEEE
Confidence 577889988887543 1111245788888777888875543
No 85
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=27.18 E-value=19 Score=17.79 Aligned_cols=13 Identities=23% Similarity=0.491 Sum_probs=9.2
Q ss_pred HHHhhhccccccc
Q psy3528 201 IVKNFFASRNERQ 213 (218)
Q Consensus 201 ~lk~fF~~Kk~~~ 213 (218)
+=++||.+|+..+
T Consensus 5 ~K~SFFdKKRser 17 (26)
T 2lsj_B 5 HKKSFFDKKRSER 17 (26)
Confidence 3468898888654
No 86
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=21.40 E-value=2.5e+02 Score=21.88 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q psy3528 138 MTQMESSTQEIHKSLNTIIDYQT 160 (218)
Q Consensus 138 l~~l~~~l~~l~~~l~~i~~eq~ 160 (218)
++++|+.++.+.+.+.+|.+...
T Consensus 8 vd~~EErIs~le~rleei~q~eq 30 (233)
T 2yko_A 8 CDQLEERVSAAEDEINEIKREGK 30 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888888887765443
No 87
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=20.64 E-value=6e+02 Score=24.82 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=37.8
Q ss_pred CCEEEEEEEEEECC------eeeEEEEEECCCCcEEeeceec--ccceE--EEEee---cceeEEEEEEec
Q psy3528 50 NTSVILEFQVVTGG------KYDVDVSIEAPTKEIIYRQVKS--QFDTH--QFVTL---VEGTYVVCFSNE 107 (218)
Q Consensus 50 ~~~i~~~y~v~~~~------~~~i~v~v~~p~g~~v~~~~~~--~~g~f--~f~~~---~~G~y~~Cf~n~ 107 (218)
|+.|.+.--+.+.+ ...+.+.|.||+|+.+.++... ..|.+ +|..+ ..|.|++=+...
T Consensus 114 GqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 114 GDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 56665554444422 1358999999999999876543 34544 44443 369999998754
Done!