Query psy3532
Match_columns 242
No_of_seqs 178 out of 201
Neff 5.5
Searched_HMMs 46136
Date Fri Aug 16 19:06:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3532.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3532hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01271 Fe65_C Fe65 C-terminal 100.0 2.1E-51 4.4E-56 331.1 14.6 117 124-242 1-117 (124)
2 cd01216 Fe65 Fe65 Phosphotyros 100.0 2.1E-40 4.5E-45 268.5 15.7 115 125-242 2-116 (123)
3 cd01272 FE65_N Fe65 Phosphotyr 100.0 3.8E-35 8.3E-40 237.8 8.8 82 1-82 57-138 (138)
4 cd01268 Numb Numb Phosphotyros 100.0 1.1E-30 2.3E-35 215.5 13.5 118 120-242 9-129 (138)
5 cd01212 JIP JNK-interacting pr 100.0 1.6E-29 3.5E-34 210.8 12.3 120 123-242 1-129 (148)
6 cd01267 CED6_AIDA1b Phosphotyr 100.0 7.4E-29 1.6E-33 201.8 13.9 114 126-242 3-125 (132)
7 cd01274 AIDA-1b AIDA-1b Phosph 100.0 3.8E-28 8.2E-33 197.8 14.4 114 126-242 3-120 (127)
8 smart00462 PTB Phosphotyrosine 100.0 5.5E-28 1.2E-32 193.7 14.2 116 124-242 3-122 (134)
9 cd01273 CED-6 CED-6 Phosphotyr 100.0 1.2E-27 2.6E-32 197.7 14.1 118 122-242 6-134 (142)
10 PF00640 PID: Phosphotyrosine 99.9 8.2E-27 1.8E-31 187.6 13.6 113 127-242 1-131 (140)
11 cd00934 PTB Phosphotyrosine-bi 99.9 1.3E-26 2.8E-31 182.4 14.2 115 125-242 2-120 (123)
12 cd01270 DYC-1 DYC-1 (DYB-1 bin 99.9 6.1E-25 1.3E-29 181.4 13.2 118 125-242 3-135 (140)
13 cd01215 Dab Disabled (Dab) Pho 99.9 2.4E-22 5.2E-27 165.8 13.2 116 124-242 12-130 (139)
14 cd01211 GAPCenA GAPCenA Phosph 99.9 1.7E-22 3.6E-27 162.9 8.9 69 3-71 48-125 (125)
15 cd01216 Fe65 Fe65 Phosphotyros 99.9 3.9E-22 8.3E-27 161.7 9.8 79 1-81 44-122 (123)
16 cd01214 CG8312 CG8312 Phosphot 99.9 6.7E-21 1.4E-25 156.1 12.5 111 126-241 3-122 (133)
17 KOG3775|consensus 99.8 4.2E-21 9.1E-26 178.6 9.2 124 119-242 331-463 (482)
18 KOG3536|consensus 99.8 9.9E-20 2.1E-24 165.7 1.1 127 113-242 35-168 (321)
19 cd01209 SHC SHC phosphotyrosin 99.8 5.6E-18 1.2E-22 142.6 11.3 117 123-242 9-154 (160)
20 KOG3537|consensus 99.8 5.3E-18 1.2E-22 160.4 11.8 114 123-241 35-151 (543)
21 cd01208 X11 X11 Phosphotyrosin 99.7 1.2E-16 2.7E-21 133.9 12.5 112 125-242 5-144 (156)
22 cd01268 Numb Numb Phosphotyros 99.7 9E-17 2E-21 132.8 9.4 71 1-71 54-129 (138)
23 cd01211 GAPCenA GAPCenA Phosph 99.7 1E-15 2.2E-20 123.7 13.5 97 128-228 5-109 (125)
24 PF14719 PID_2: Phosphotyrosin 99.7 1.1E-15 2.3E-20 131.6 12.8 111 126-241 1-119 (182)
25 cd01213 tensin Tensin Phosphot 99.6 1.1E-15 2.5E-20 126.2 11.1 105 127-233 8-126 (138)
26 cd01267 CED6_AIDA1b Phosphotyr 99.6 5.2E-16 1.1E-20 126.3 8.2 72 2-73 50-127 (132)
27 cd01272 FE65_N Fe65 Phosphotyr 99.6 3.9E-14 8.4E-19 115.6 12.4 115 125-242 2-131 (138)
28 cd00934 PTB Phosphotyrosine-bi 99.6 1.8E-14 3.8E-19 113.2 8.8 74 1-74 46-119 (123)
29 smart00462 PTB Phosphotyrosine 99.5 3.4E-14 7.4E-19 113.7 9.4 82 1-82 48-129 (134)
30 cd01274 AIDA-1b AIDA-1b Phosph 99.5 2.6E-14 5.7E-19 116.5 8.6 70 2-72 46-121 (127)
31 cd01269 PLX Pollux (PLX) Phosp 99.5 1E-13 2.2E-18 112.3 10.5 114 125-241 2-125 (129)
32 PF00640 PID: Phosphotyrosine 99.5 2.3E-13 4.9E-18 109.3 9.2 75 1-75 56-131 (140)
33 cd01273 CED-6 CED-6 Phosphotyr 99.4 3E-13 6.4E-18 111.9 8.3 76 2-77 60-140 (142)
34 cd01212 JIP JNK-interacting pr 99.4 5.2E-13 1.1E-17 111.6 8.1 79 1-79 49-137 (148)
35 KOG3537|consensus 99.4 3.1E-13 6.7E-18 128.4 7.5 60 2-61 78-137 (543)
36 cd01270 DYC-1 DYC-1 (DYB-1 bin 99.4 1.2E-12 2.5E-17 108.6 7.8 70 2-71 48-135 (140)
37 PF08416 PTB: Phosphotyrosine- 99.3 1.3E-10 2.8E-15 95.2 14.2 112 127-241 2-121 (131)
38 cd01271 Fe65_C Fe65 C-terminal 99.3 1.6E-11 3.4E-16 99.7 8.2 71 3-75 46-117 (124)
39 cd01215 Dab Disabled (Dab) Pho 99.1 1.8E-10 3.8E-15 95.5 7.5 66 2-71 58-130 (139)
40 cd01269 PLX Pollux (PLX) Phosp 99.0 3E-10 6.5E-15 92.2 5.4 69 3-71 49-126 (129)
41 cd01209 SHC SHC phosphotyrosin 98.8 6.7E-09 1.5E-13 87.8 4.6 68 3-71 81-154 (160)
42 KOG3535|consensus 98.6 8.2E-08 1.8E-12 91.5 8.2 94 124-220 48-148 (557)
43 cd01208 X11 X11 Phosphotyrosin 98.6 1E-07 2.3E-12 80.3 7.5 72 3-78 56-151 (156)
44 cd01214 CG8312 CG8312 Phosphot 98.6 1.2E-07 2.6E-12 78.1 7.7 61 2-64 47-110 (133)
45 cd01217 CG12581 CG12581 Phosph 98.6 1.2E-06 2.6E-11 73.2 11.8 104 125-229 2-140 (158)
46 PF08416 PTB: Phosphotyrosine- 98.5 4.1E-07 9E-12 74.5 6.9 76 2-77 45-124 (131)
47 PF14719 PID_2: Phosphotyrosin 98.4 9.1E-07 2E-11 76.5 8.3 72 2-75 44-128 (182)
48 cd01213 tensin Tensin Phosphot 98.4 5.5E-07 1.2E-11 74.7 6.5 69 2-70 49-133 (138)
49 KOG1930|consensus 98.4 1.2E-06 2.7E-11 83.5 9.5 95 127-225 347-457 (483)
50 KOG3536|consensus 98.3 3.4E-08 7.4E-13 90.8 -2.6 77 3-79 96-176 (321)
51 PF10480 ICAP-1_inte_bdg: Beta 98.2 6.2E-05 1.3E-09 65.4 14.3 116 121-241 57-191 (200)
52 KOG3605|consensus 97.5 3.2E-05 6.9E-10 77.5 1.6 125 114-242 429-600 (829)
53 KOG3697|consensus 97.2 0.00019 4E-09 66.2 2.8 117 123-242 15-165 (345)
54 KOG4448|consensus 97.2 0.0027 5.8E-08 59.4 9.3 106 127-237 63-177 (374)
55 cd01210 EPS8 Epidermal growth 97.1 0.0048 1E-07 50.7 9.7 113 126-241 3-123 (127)
56 KOG3535|consensus 96.9 0.006 1.3E-07 59.0 9.1 45 3-47 98-142 (557)
57 cd01210 EPS8 Epidermal growth 96.1 0.011 2.3E-07 48.7 4.9 72 1-72 46-121 (127)
58 PF10480 ICAP-1_inte_bdg: Beta 95.6 0.072 1.6E-06 46.6 8.1 71 1-71 112-192 (200)
59 cd01217 CG12581 CG12581 Phosph 95.5 0.074 1.6E-06 44.9 7.7 60 11-72 59-148 (158)
60 cd00900 PH-like Pleckstrin hom 95.4 0.065 1.4E-06 38.0 6.4 68 2-71 25-97 (99)
61 cd00900 PH-like Pleckstrin hom 95.4 0.14 3.1E-06 36.2 8.2 75 159-239 16-98 (99)
62 KOG1930|consensus 93.8 0.055 1.2E-06 52.4 3.4 66 3-68 389-470 (483)
63 KOG3775|consensus 93.2 0.25 5.4E-06 47.5 6.6 78 2-79 384-471 (482)
64 KOG4458|consensus 91.6 0.11 2.4E-06 38.2 1.7 30 125-154 34-63 (78)
65 KOG3557|consensus 91.3 0.24 5.3E-06 50.3 4.3 114 125-241 46-167 (721)
66 PF02174 IRS: PTB domain (IRS- 90.2 1.7 3.6E-05 33.8 7.3 70 163-241 22-95 (100)
67 KOG3697|consensus 89.8 0.067 1.4E-06 49.7 -1.1 67 4-71 93-165 (345)
68 cd00824 PTBI IRS-like phosphot 81.6 6.7 0.00014 31.1 6.6 66 1-73 25-93 (104)
69 PF02174 IRS: PTB domain (IRS- 77.4 11 0.00024 29.1 6.6 67 2-73 27-94 (100)
70 cd01203 DOK_PTB Downstream of 77.0 6.1 0.00013 31.5 5.1 64 1-71 25-91 (104)
71 cd01203 DOK_PTB Downstream of 72.7 19 0.00041 28.7 6.8 70 163-241 21-94 (104)
72 KOG3557|consensus 67.1 2.8 6.2E-05 42.9 1.4 63 2-64 91-156 (721)
73 smart00310 PTBI Phosphotyrosin 65.5 6.5 0.00014 30.9 2.8 43 1-46 24-66 (98)
74 smart00310 PTBI Phosphotyrosin 60.8 71 0.0015 25.1 7.9 70 163-241 20-93 (98)
75 PF00169 PH: PH domain; Inter 48.4 94 0.002 21.8 7.1 68 2-72 23-101 (104)
76 cd01258 PH_syntrophin Syntroph 47.1 32 0.0007 27.5 4.0 68 2-71 25-106 (108)
77 smart00233 PH Pleckstrin homol 46.3 94 0.002 21.2 6.5 67 2-71 24-98 (102)
78 cd00824 PTBI IRS-like phosphot 36.0 2.2E+02 0.0047 22.5 8.2 70 163-241 21-94 (104)
79 KOG0507|consensus 29.2 5.3 0.00012 41.7 -3.8 99 124-226 506-613 (854)
80 cd01785 PDZ_GEF_RA Ubiquitin-l 29.2 1.8E+02 0.0038 22.4 5.3 49 128-178 13-61 (85)
81 cd01260 PH_CNK Connector enhan 26.2 1.9E+02 0.0042 21.2 5.2 59 2-64 26-85 (96)
82 PF15092 UPF0728: Uncharacteri 26.0 67 0.0014 24.9 2.6 21 186-206 59-79 (88)
83 KOG4448|consensus 25.0 2.2E+02 0.0048 27.3 6.3 47 18-64 120-169 (374)
84 TIGR02276 beta_rpt_yvtn 40-res 23.8 93 0.002 18.9 2.6 20 4-23 12-31 (42)
85 COG5514 Uncharacterized conser 22.8 1.6E+02 0.0035 25.7 4.6 54 8-61 107-168 (203)
86 cd00821 PH Pleckstrin homology 22.4 2.5E+02 0.0054 18.8 5.8 59 2-63 22-84 (96)
87 PF09151 DUF1936: Domain of un 21.8 52 0.0011 20.9 1.0 11 54-64 22-32 (36)
88 cd01262 PH_PDK1 3-Phosphoinosi 21.6 2.9E+02 0.0063 21.4 5.4 63 5-73 25-87 (89)
89 cd01202 FRS2 Fibroblast growth 20.2 4.2E+02 0.0091 21.1 6.1 68 163-241 21-92 (102)
No 1
>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=2.1e-51 Score=331.07 Aligned_cols=117 Identities=53% Similarity=0.918 Sum_probs=112.5
Q ss_pred ceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC
Q psy3532 124 KKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH 203 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk 203 (242)
+|+|+++|||+|||++|+||||||+||++|++++++++|.||+++|+|++|+|++.+++ +++++|||||||||||+||
T Consensus 1 ~~~f~~~yLG~~~V~~p~Gmdvln~AI~~l~~~~~~~~w~~V~vsvaps~v~v~~~~~~--~~~l~ecrVr~lSF~GvgK 78 (124)
T cd01271 1 VKVFRVQYLGMLPVDKPTGMEILNSAIDNLMSSSNKEDWLSVNVNVAPSTITVISEKNE--EEVLVECRVRYLSFLGIGK 78 (124)
T ss_pred CcEEEEEEeccEeecCCccHHHHHHHHHHHHhcCCcccCceEEEEeCCceEEEEccCcc--ceeeeeeeEEEeccccCCC
Confidence 47899999999999999999999999999999999999999999999999999987753 3899999999999999999
Q ss_pred CCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 204 NVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 204 d~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
|.|+||||||+++++|+||||||||+|++|||||||||+
T Consensus 79 d~k~fafI~~~~~~~f~ChVF~ce~~A~~ls~av~aAc~ 117 (124)
T cd01271 79 DVHTCAFIMDTGNQRFECHVFWCEPNAGNVSKAVEAACK 117 (124)
T ss_pred CccEEEEEEecCCCcEEEEEEEecCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996
No 2
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=2.1e-40 Score=268.46 Aligned_cols=115 Identities=44% Similarity=0.795 Sum_probs=111.1
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCC
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHN 204 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd 204 (242)
|+|+|+|||+++|++|+||+|+|+||++|+.++...+|.++.|.|++++|+|.|++++ +++++|+|++|||||+|||
T Consensus 2 ~~F~VkyLG~~eV~~~~g~~vv~~ai~~L~~~~~~~~~~~v~l~Vs~~~l~l~d~~t~---~~l~~~~i~~Isf~~~gk~ 78 (123)
T cd01216 2 KVFAVRSLGWVEVAEEDGSEALNKAIDDLSSCSNWEDWKDLNMDLAPSTLSLIDPDNL---TVLHECRVRYLSFWGVGRD 78 (123)
T ss_pred cEEEEEeeeeEEECCCCCHHHHHHHHHHHHhccccccCeEEEEEEecCcEEEEcCCCC---eEEEEEEeeEEEEEEcCCC
Confidence 6899999999999999999999999999998888889999999999999999999987 9999999999999999998
Q ss_pred CceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 205 VKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 205 ~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+|.||||+++++++|.||||+|+++|++||+|||+||+
T Consensus 79 ~r~FafI~~~~~~~~~CHVF~c~~~a~~i~~tv~~ac~ 116 (123)
T cd01216 79 VRDFAFIMRTERRRFMCHVFRCEPNAGALATTVEAACK 116 (123)
T ss_pred CcEEEEEEEcCCCeEEEEEEEcCCCHHHHHHHHHHHHH
Confidence 89999999888899999999999999999999999996
No 3
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=3.8e-35 Score=237.85 Aligned_cols=82 Identities=73% Similarity=1.193 Sum_probs=80.8
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhhhHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICKKIMIE 80 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~~~~~e 80 (242)
|+|++|+|+|+||.++++||+|||++|||||||++|++||||+++|++|++||||||||++|+++||+|||++|++||+|
T Consensus 57 m~L~~g~lkLiDP~~~s~LhSqPI~~IRvwGvGrdngrdFA~vard~~T~~~~CHVFRC~~pak~ia~~l~~~c~~~m~e 136 (138)
T cd01272 57 MDLDEGALKLIDPENLTVLHSQPIHTIRVWGVGRDNGRDFAYVIRDERTRGSNCHVFRCDTRAKDIATELRRICRHPMSF 136 (138)
T ss_pred EEecCCceEeeCCCCCceEEeeeeeEEEEEEecCCCCcceEEEeecCCCceeEEEEEEcCCCCccchHHHHHHHHhhhhc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh
Q psy3532 81 RS 82 (242)
Q Consensus 81 r~ 82 (242)
|+
T Consensus 137 r~ 138 (138)
T cd01272 137 RT 138 (138)
T ss_pred cC
Confidence 85
No 4
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain. Numb Phosphotyrosine-binding (PTB) domain. Numb is a membrane associated adaptor protein, which is a determinant of asymmetric cell division. Numb has an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.97 E-value=1.1e-30 Score=215.51 Aligned_cols=118 Identities=14% Similarity=0.249 Sum_probs=106.9
Q ss_pred CCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEee
Q psy3532 120 MEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFL 199 (242)
Q Consensus 120 ~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~ 199 (242)
..+..-.|.|||||+++|++|+|++|+.+||++|..+. .++++|.|+||+.||.+.|.+|+ +++++++|++||||
T Consensus 9 ~~~g~~~f~vKyLG~veV~~~rG~~v~~~A~~klk~~~--~k~~kv~L~VS~~Gi~vvd~~Tk---~~i~~~~i~~ISfc 83 (138)
T cd01268 9 VRTGTCSFPVKYLGHVEVDESRGMQVCEDALKRLKASR--RKPVKAVLWVSGDGLRVVDEKTK---GLIVDQTIEKVSFC 83 (138)
T ss_pred HhcCceeEEeEecceEEccCcCCChHHHHHHHHHHhhc--cCCCEEEEEEecCcEEEEecCCC---cEEEEEeEEEEEEE
Confidence 34456789999999999999999999999999998754 56789999999999999999887 99999999999999
Q ss_pred ecCC-CCceEEEEE-eCCCCceEEEEEEcCC-CchHHHHHHHHHhC
Q psy3532 200 GIGH-NVKQCAFIM-HTAQDLFIAHVFVTEP-SSGALCKTIEAACK 242 (242)
Q Consensus 200 gvgk-d~k~FafI~-~~~~~~f~CHVF~ce~-~A~~lseaV~aAc~ 242 (242)
+.++ |.++||||+ |+.+++|.||||.|.+ +|.+|++|||.|++
T Consensus 84 a~D~~d~r~FayIakd~~~~r~~CHvF~~~k~sa~~i~~avG~AF~ 129 (138)
T cd01268 84 APDRNFDRGFSYICRDGTTRRWMCHGFLAVKDTGERLSHAVGCAFA 129 (138)
T ss_pred ecCCCCCcEEEEEecCCCcccEEEEEEEeeccchhHHHHHHHHHHH
Confidence 9955 899999999 7779999999999965 57899999999974
No 5
>cd01212 JIP JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JIP is a mitogen-activated protein kinase scaffold protein. JIP consists of a C-terminal SH3 domain, followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.96 E-value=1.6e-29 Score=210.79 Aligned_cols=120 Identities=19% Similarity=0.279 Sum_probs=102.6
Q ss_pred cceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCC----CCCceeeEEEEcCCeEEEEecCCCcC--ceeeeeEE-EEE
Q psy3532 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVP----QHLWQDVNIAVAPSMITIHSTDEETG--GTLMAECR-VRF 195 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~----~~~w~pv~l~Vs~~~i~i~~~~~~~~--~e~l~ec~-vr~ 195 (242)
|+++|.||||||++|++++|++|+.+||++|++.+. ..++++|.|.||+.||++.|+.+++- ..+++..+ |++
T Consensus 1 ~~~~f~vkyLGsveV~~~kG~~v~~~A~rki~~~~k~~~~~~~~~~v~L~VS~~Girl~D~~t~~~~~~~~~~~f~~l~n 80 (148)
T cd01212 1 KKERFLLGYLGSVEVLAHKGNGVLCQAMRKIVGEYKNSEESPTPQTCILEISDRGLRMVDRSGPNKDKKPCIDFFYSLKN 80 (148)
T ss_pred CCceEEeEecceEEecCCCCcHHHHHHHHHHHHHHHhhccCCCCcEEEEEEecCcEEEEecCCCcccccchhhccccccc
Confidence 568899999999999999999999999999986542 24567899999999999999877510 01233444 999
Q ss_pred EEeeec-CCCCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 196 LSFLGI-GHNVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 196 iSF~gv-gkd~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
|||||. +.|.|+||||+ |+.+++|.||||.|+.++.+|+.|||.|++
T Consensus 81 ISFCa~d~~~~r~F~FIak~~~~~~~~CHVF~s~~~~~~I~~aIG~AF~ 129 (148)
T cd01212 81 ISFCGFHPRDHRYFGFITKHPLLQRFACHVFKSSESTRPVAEAVGRAFQ 129 (148)
T ss_pred eEEEEEcCCCCcEEEEEeccCCCCceEEEEEEeCCcchHHHHHHHHHHH
Confidence 999999 55899999999 777999999999999999999999999974
No 6
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.96 E-value=7.4e-29 Score=201.80 Aligned_cols=114 Identities=22% Similarity=0.311 Sum_probs=104.0
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHhcCC-----CCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeee
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVP-----QHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLG 200 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~-----~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~g 200 (242)
.|+|||||+++|++|+|++++++||++|..++. ..++++|.|.||+.||+|.|.+++ +++.+++|++||||+
T Consensus 3 ~f~vkyLGs~~V~~~~g~~~~~~Ai~~l~~~~~~~~~~~~k~~~V~L~IS~~gi~i~d~~t~---~~l~~~~i~~ISfc~ 79 (132)
T cd01267 3 VYRAKFLGSLEIGKLKGTEVAREAIRKLKFSRILKTAEWEKIPKVELDISIKGVKIIDPKTK---TVLHGHPLYNISCCA 79 (132)
T ss_pred EEEEEEEEEEEecCCCChHHHHHHHHHHHhhhhcchhccCCCCeEEEEEEcCcEEEEeCCCC---cEEEEcccceEEEEe
Confidence 699999999999999999999999999986543 245678999999999999998887 899999999999999
Q ss_pred cCC-CCceEEEEE-eCCCCceEEEEEEcCCC--chHHHHHHHHHhC
Q psy3532 201 IGH-NVKQCAFIM-HTAQDLFIAHVFVTEPS--SGALCKTIEAACK 242 (242)
Q Consensus 201 vgk-d~k~FafI~-~~~~~~f~CHVF~ce~~--A~~lseaV~aAc~ 242 (242)
.|+ |.++||||+ ++..++|.||||.|++. |.+|+.+|+.|++
T Consensus 80 ~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~AF~ 125 (132)
T cd01267 80 QDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQAFE 125 (132)
T ss_pred cCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 966 789999999 66679999999999999 9999999999985
No 7
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b is an amyloid-beta precursor protein interacting protein. It consists of ankyrin repeats, a SAM domain and a C-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.96 E-value=3.8e-28 Score=197.78 Aligned_cols=114 Identities=18% Similarity=0.293 Sum_probs=101.6
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCC-CCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec-CC
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQ-HLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI-GH 203 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~-~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv-gk 203 (242)
.|+|||||+++|++|+|++++.+||++|..+... ++.++|.|+||..||++.+.+++ +++.+++|++||||+- ++
T Consensus 3 ~f~akyLGs~eV~~~~G~~~~~~Am~kik~~~~~~~k~~~V~L~IS~~Gv~v~d~~tk---~~i~~~~i~~ISf~~~D~~ 79 (127)
T cd01274 3 VYRAHYLGSLEIGELEGTDSTHAAMTKIKESIIDWETIPRVTLDLTCNGVKFIDETFK---TLIDGHGIYNIRCVCQDRE 79 (127)
T ss_pred EEEEEccceEEccCCCCcHHHHHHHHHHHHhhhccCCCCEEEEEEeCCeEEEEECCCC---eEEEEeeeeEEEEEecCCC
Confidence 6999999999999999999999999999865432 35578999999999999998887 9999999999999976 66
Q ss_pred CCceEEEEEeCCCCceEEEEEEcCCC--chHHHHHHHHHhC
Q psy3532 204 NVKQCAFIMHTAQDLFIAHVFVTEPS--SGALCKTIEAACK 242 (242)
Q Consensus 204 d~k~FafI~~~~~~~f~CHVF~ce~~--A~~lseaV~aAc~ 242 (242)
|.++||||+..+.++|.||||+|+.. |.+|..+||.|++
T Consensus 80 d~~~FayIakd~~~~~~CHvF~~~~~~~A~~I~~tigqAF~ 120 (127)
T cd01274 80 DLNFFAYITKDTENRHYCHVFCVLTSGLAAEIITTLGQAFE 120 (127)
T ss_pred CceEEEEEeeCCCCCEEEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 89999999955449999999999654 9999999999975
No 8
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=99.96 E-value=5.5e-28 Score=193.74 Aligned_cols=116 Identities=22% Similarity=0.417 Sum_probs=105.9
Q ss_pred ceeEEEEeeeeeEecCCchhhHHHHHHHHHHhc--CCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec
Q psy3532 124 KKILRAQYLGSIQVSKPGGMDILNNAIDTLVST--VPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI 201 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~--~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv 201 (242)
...|+|+|||+++|..++|++++++||++|... ....+|++|.|.||+.||++.+.+++ .++.++++++||||++
T Consensus 3 ~~~f~v~YLGs~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~v~~~~~~---~~l~~~~l~~Isf~~~ 79 (134)
T smart00462 3 GVSFRVKYLGSVEVPEARGLQVVQEAIRKLRAAQGSEKKEPQKVILSISSRGVKLIDEDTK---AVLHEHPLRRISFCAV 79 (134)
T ss_pred ceEEEEEEEEEEEecCCCCcHHHHHHHHHHHHhhhhccCCCCEEEEEEECCcEEEEECCCC---eEEEEccccceEEEec
Confidence 467999999999999999999999999999873 34567899999999999999998876 8999999999999999
Q ss_pred C-CCCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 202 G-HNVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 202 g-kd~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+ +|.++||||+ +++++.|.||||+|++.|.+|+.+|+.||+
T Consensus 80 ~~~~~~~F~fI~~~~~~~~~~CHvF~c~~~a~~i~~~i~~aF~ 122 (134)
T smart00462 80 GPDDLDVFGYIARDPGSSRFACHVFRCEKAAEDIALAIGQAFQ 122 (134)
T ss_pred CCCCCcEEEEEeeCCCCCeEEEEEEEcCchHHHHHHHHHHHHH
Confidence 5 6899999999 556678999999999999999999999985
No 9
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.95 E-value=1.2e-27 Score=197.70 Aligned_cols=118 Identities=20% Similarity=0.272 Sum_probs=104.9
Q ss_pred ccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC------C--CCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEE
Q psy3532 122 EPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV------P--QHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRV 193 (242)
Q Consensus 122 e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~------~--~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~v 193 (242)
+....|.|||||+++|.+|+|++++.+||++|.... . ..++++|.|.||+.||+|.+.++. +++.+++|
T Consensus 6 ~g~v~f~vkyLG~~eV~~~~g~~v~~eAi~ki~~a~~~k~~~~~~~~k~~~V~L~IS~~GI~v~d~~t~---~~~~~~~i 82 (142)
T cd01273 6 NGHVEYVAKFLGCVEVDQPKGSEVVREAIRKLRFARDLKKSEQTRTAKLQKVEIRISIDGVIIAEPKTK---APMHTFPL 82 (142)
T ss_pred cCceEEEEEEeeeEEecCCCCchHHHHHHHHHHHHHhhhhccccccccCcEEEEEEECCeEEEEEcCCC---cEEEEcCc
Confidence 345789999999999999999999999999986321 1 256789999999999999998887 99999999
Q ss_pred EEEEeeecC-CCCceEEEEE-eCCC-CceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 194 RFLSFLGIG-HNVKQCAFIM-HTAQ-DLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 194 r~iSF~gvg-kd~k~FafI~-~~~~-~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
++||||+.+ .|.++||||+ |+.+ ++|.||||.|++.|.+|+.|||.|++
T Consensus 83 ~~ISfca~d~~~~r~FayIak~~~~~~~~~ChvF~s~~~A~~I~~tigqAF~ 134 (142)
T cd01273 83 GRISFCADDKDDKRMFSFIAKAEGASGKHSCFVFTSEKLAEDITLTIGQAFD 134 (142)
T ss_pred ceEEEEecCCCCCeEEEEEecCCCCCCcEEEEEEeccchHHHHHHHHHHHHH
Confidence 999999994 5899999999 6554 89999999999999999999999974
No 10
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=99.95 E-value=8.2e-27 Score=187.64 Aligned_cols=113 Identities=27% Similarity=0.452 Sum_probs=104.5
Q ss_pred EEEEeeeeeEecCC------chhhHHHHHHHHHHhc---------CCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeE
Q psy3532 127 LRAQYLGSIQVSKP------GGMDILNNAIDTLVST---------VPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAEC 191 (242)
Q Consensus 127 f~vkyLGsv~V~~~------~G~dVln~Ai~~i~~~---------~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec 191 (242)
|.|+|||+++|+.+ .|++++.+||+++... ....+|++|.|.|++.+|++.+.+++ +++.++
T Consensus 1 F~vkYLGs~~V~~~~~~~~~~g~~~v~~ai~~~~~~~~~~~~~~~~~~~~~~~V~l~vs~~gI~v~~~~t~---~~l~~~ 77 (140)
T PF00640_consen 1 FEVKYLGSVEVSSSRRGDKSRGSDVVREAIQRLKAEKIAKSKKSKSNKKKPQKVTLNVSSDGIKVIDPDTG---EVLMSH 77 (140)
T ss_dssp EEEEEEEEEEESSSSSTCHHHHHHHHHHHHHHHHHHCCCSHHHHHTTTSTSEEEEEEEETTEEEEEETTTT---CEEEEE
T ss_pred CEEEEEEEEEECCccCCCcchhHHHHHHHHHHHHhhhhhhhhccccccccCeEEEEEEcCCeEEEecCccc---cccccC
Confidence 89999999999999 7999999999999876 35568899999999999999998876 999999
Q ss_pred EEEEEEeeec-CC-CCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 192 RVRFLSFLGI-GH-NVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 192 ~vr~iSF~gv-gk-d~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+|++||||++ +. |.++||||+ +++.++|.||||+|++.|.+|+.+|+.||+
T Consensus 78 ~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~~A~~i~~~i~~aF~ 131 (140)
T PF00640_consen 78 PIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCEDQAQEICQAIGQAFE 131 (140)
T ss_dssp EGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhhHHHHHHHHHHHHHH
Confidence 9999999999 55 699999998 777899999999999999999999999985
No 11
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.94 E-value=1.3e-26 Score=182.43 Aligned_cols=115 Identities=23% Similarity=0.387 Sum_probs=105.4
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCC--CCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecC
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVP--QHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIG 202 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~--~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvg 202 (242)
..|+|+|||+++|+.++|++++++||++|..... +.+++++.|.|++.||+|.+.+++ +++.++++++||||+++
T Consensus 2 ~~f~v~ylG~~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~l~d~~~~---~~l~~~~l~~Is~~~~~ 78 (123)
T cd00934 2 ISFNVKYLGSVEVPEPRGSQVVRDAIRKLKAASKQGGEKGQKVILSVSSDGVKLIDPKTK---EVLASHPIRRISFCAAD 78 (123)
T ss_pred cEEEEEEEEEEEecCCCCchHHHHHHHHHHHhhhhcccCCCEEEEEEEcCcEEEEeCCCC---cEEEeeccceEEEEECC
Confidence 4699999999999999999999999999987654 467889999999999999998776 88999999999999996
Q ss_pred C-CCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 203 H-NVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 203 k-d~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+ ++++||||+ +++.+.|+||||+|++.|..|+++|+.||+
T Consensus 79 ~~~~~~F~~i~~~~~~~~~~CHvF~c~~~a~~i~~~l~~af~ 120 (123)
T cd00934 79 PDDLRIFAFIAREPGSSRFECHVFKCEKVAEPIALTLGQAFQ 120 (123)
T ss_pred CCCCcEEEEEEEcCCCCcEEEEEEEeCchHHHHHHHHHHHHH
Confidence 5 899999999 556799999999999999999999999985
No 12
>cd01270 DYC-1 DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 contains an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domains of both SHC and IRS-1, for example, bind to a NPXpY sequence. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.92 E-value=6.1e-25 Score=181.44 Aligned_cols=118 Identities=16% Similarity=0.252 Sum_probs=102.7
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhc--CCCCCceeeEEEEcCCeEEEEecCCC---------cCceeeeeEEE
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVST--VPQHLWQDVNIAVAPSMITIHSTDEE---------TGGTLMAECRV 193 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~--~~~~~w~pv~l~Vs~~~i~i~~~~~~---------~~~e~l~ec~v 193 (242)
-.|.|||||+++|++|+|++++.+||++|... ..+.++++|.|.||+.||.|.+..+. ++.+++.+++|
T Consensus 3 itF~vKYlG~~eV~~~~g~~~~~~A~rrir~~~ka~~~Kk~kV~l~VS~~Gv~v~d~k~~~~~~~~~~~~tk~li~~~~i 82 (140)
T cd01270 3 ITFEAKYVGSEEVPRPNTRAEIVAAMRRIRYEFKAQNIKKRKVTIHVSVDGVKVVLKKKKRKKKNWTWDESKILVMNHPI 82 (140)
T ss_pred eEEEEEEcceEEecCCCCcCHHHHHHHHHHHHHHHhCCCceeEEEEEecCcEEEEecccccccccccccCcccEEEecCe
Confidence 36999999999999999999999999999743 24557889999999999999885421 23489999999
Q ss_pred EEEEeeecCC-CCceEEEEE-eCCCCceEEEEEEcCCC--chHHHHHHHHHhC
Q psy3532 194 RFLSFLGIGH-NVKQCAFIM-HTAQDLFIAHVFVTEPS--SGALCKTIEAACK 242 (242)
Q Consensus 194 r~iSF~gvgk-d~k~FafI~-~~~~~~f~CHVF~ce~~--A~~lseaV~aAc~ 242 (242)
++||||..++ |.++||||+ +++++++.||||.|.+. |.+|..|||.|++
T Consensus 83 ~rISf~a~D~~~~k~FayIakd~~~~~~~ChvF~~~k~~~A~~I~~TIGqAFe 135 (140)
T cd01270 83 YRIFYVSHDSQDLKIFSYIARDGASNTFKCNVFKSHKKSQAMRIVRTVGQAFE 135 (140)
T ss_pred eEEEEeecCCCCCcEEEEEecCCCCCceEEEEEEEcChhhHHHHHHHHHHHHH
Confidence 9999999977 899999999 55599999999999973 8899999999985
No 13
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=99.89 E-value=2.4e-22 Score=165.81 Aligned_cols=116 Identities=11% Similarity=0.147 Sum_probs=101.7
Q ss_pred ceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC--CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec
Q psy3532 124 KKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV--PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI 201 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~--~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv 201 (242)
.-.|.|||||+++|++|+|++|..+||++|.... .+.+.++|.|.||+.||.|.|..|+ .++++++|++||||..
T Consensus 12 gv~f~aKylG~~eV~e~RG~~v~~~Ai~klk~~~k~~~~kk~kV~L~IS~dGi~v~D~~T~---~ll~~~~i~rISfca~ 88 (139)
T cd01215 12 GVSYKAKLIGIQEVDKARGDAMCAEAMRKAKSIIKGAGAHKTRITLQINIDGIKVLDEKTG---AVLHHHPVHRISFIAR 88 (139)
T ss_pred cEEEEEEecccEecccCCchHHHHHHHHHHHHHhhhhccccceEEEEEccCCEEEEcCCCC---cEEEeeceeeEEEEec
Confidence 4579999999999999999999999999997542 3456789999999999999999887 9999999999999999
Q ss_pred CC-CCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 202 GH-NVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 202 gk-d~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
++ |.|.||||+..+.+.+.|.+|-.++.|.+|..+|+.|++
T Consensus 89 D~~d~r~FsyI~~~~~~~H~f~~~k~~k~A~~i~lti~~aF~ 130 (139)
T cd01215 89 DSTDARAFGYVYGEPGGKHRFYGIKTAQAADQVVLAIRDLFQ 130 (139)
T ss_pred CCCCCeEEEEEEEcCCCcEEEEEEEhHHcchhhhhhHHHHHH
Confidence 77 999999999555455667777778889999999999974
No 14
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.88 E-value=1.7e-22 Score=162.89 Aligned_cols=69 Identities=26% Similarity=0.467 Sum_probs=65.8
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcc---eEEEEeeCCcceeEeEEEeecCchh------hHHHHHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD---FAYVARDRSTRRHMCHVFRCDMPAR------TIANTLR 71 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~---Fa~v~~d~~t~~~~CHVFrc~~~a~------~~a~Af~ 71 (242)
.++|+|+|+|+.|+++|.+|||++|+||+||++++.+ |||+++++++++||||||||+++|+ +|++||+
T Consensus 48 ~seG~V~l~D~~t~~~ias~~I~rI~fC~rG~~~t~e~~cFAft~s~~~se~~qcHVFrC~~~eav~kil~sF~~AF~ 125 (125)
T cd01211 48 NIEGTVKLIDAQSNKVIASFSIVNIRFCIRGESSTSENNCFAFTFTHKISILFQCHVFRCSIAEAVAKALYSFSYAFS 125 (125)
T ss_pred CCCceEEEEcCCCCcEEEEEEEEEEEEEEecCCCCcccccEEEEeecCCceEEEEEEEecCCHHHHHHHHHHHHHhhC
Confidence 4789999999999999999999999999999999985 9999999999999999999999999 8999884
No 15
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.87 E-value=3.9e-22 Score=161.70 Aligned_cols=79 Identities=47% Similarity=0.845 Sum_probs=74.8
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhhhHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICKKIMIE 80 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~~~~~e 80 (242)
|.++.++|+|+||+|+.+|++|||++|+|||+|+++ |+||||++|++ ++|+||||+|+.+|..|++|++++|+..+.+
T Consensus 44 l~Vs~~~l~l~d~~t~~~l~~~~i~~Isf~~~gk~~-r~FafI~~~~~-~~~~CHVF~c~~~a~~i~~tv~~ac~l~y~k 121 (123)
T cd01216 44 MDLAPSTLSLIDPDNLTVLHECRVRYLSFWGVGRDV-RDFAFIMRTER-RRFMCHVFRCEPNAGALATTVEAACKLRYQK 121 (123)
T ss_pred EEEecCcEEEEcCCCCeEEEEEEeeEEEEEEcCCCC-cEEEEEEEcCC-CeEEEEEEEcCCCHHHHHHHHHHHHHHHhhc
Confidence 467899999999999999999999999999999999 99999999987 9999999999999999999999999988776
Q ss_pred H
Q psy3532 81 R 81 (242)
Q Consensus 81 r 81 (242)
+
T Consensus 122 ~ 122 (123)
T cd01216 122 C 122 (123)
T ss_pred c
Confidence 4
No 16
>cd01214 CG8312 CG8312 Phosphotyrosine-binding (PTB) domain. CG8312 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.85 E-value=6.7e-21 Score=156.07 Aligned_cols=111 Identities=13% Similarity=0.152 Sum_probs=95.1
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHhcCC--CCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVP--QHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH 203 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~--~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk 203 (242)
.|+|+|||+++|..|+|.+...+||++|..... +.+++++.|+|+|.||.+.+.+ ..+.+.+|++||||..++
T Consensus 3 ty~VkYLG~~~t~~~~Geg~t~~av~~I~~~~~~~~k~~~km~L~Vsp~GI~~~~~~-----~~~~~~~i~RIsYCsad~ 77 (133)
T cd01214 3 TYTVLYLGNVLTIQARGEGCTEKALGKIWSKYEAGARQDTKMKLTVSASGLKAVTAQ-----RGLTEYWAHRITYCVAPA 77 (133)
T ss_pred cEEEEEcccccccccCCCccHHHHHHHHHHHHhhcccccceEEEEEcCCceEEEecc-----ccceEEEEeeeeeecCCc
Confidence 599999999999999999999999999987653 3578999999999999998755 346788999999999976
Q ss_pred -CCceEEEEE-eCC---CCceEEEEEEcCC--CchHHHHHHHHHh
Q psy3532 204 -NVKQCAFIM-HTA---QDLFIAHVFVTEP--SSGALCKTIEAAC 241 (242)
Q Consensus 204 -d~k~FafI~-~~~---~~~f~CHVF~ce~--~A~~lseaV~aAc 241 (242)
.+|+||||. |.+ +..+.||+|+|++ .|.+|+.+|..|+
T Consensus 78 ~~p~VFa~I~r~~~~~~~~~l~CHAvlC~k~~~A~aial~L~q~f 122 (133)
T cd01214 78 RYPKVFCWIYRHEGKHLKVELRCHAVLCSKPEKAQAIALLLYQTL 122 (133)
T ss_pred CCCcEEEEEEeecccccCcceEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 799999999 554 3689999999976 5667887777664
No 17
>KOG3775|consensus
Probab=99.84 E-value=4.2e-21 Score=178.63 Aligned_cols=124 Identities=17% Similarity=0.214 Sum_probs=105.8
Q ss_pred CCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCC-Cc---eeeEEEEcCCeEEEEecCCC---cCceeeeeE
Q psy3532 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQH-LW---QDVNIAVAPSMITIHSTDEE---TGGTLMAEC 191 (242)
Q Consensus 119 p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~-~w---~pv~l~Vs~~~i~i~~~~~~---~~~e~l~ec 191 (242)
+.+-|+.+|.++|||||+|+.+||++||++||++|++..+.. .. .-+.+.||-.||.+..+..+ ....+-+..
T Consensus 331 ~~~~~~erf~l~~LgSVEv~~HKGngVlcqAm~KI~t~ykns~~~~~p~s~~lEislRgV~~s~k~~~~~~k~~~c~~f~ 410 (482)
T KOG3775|consen 331 RSPCWVERFDLQFLGSVEVPCHKGNGVLCQAMQKIATAYKNSVHLRPPASCVLEISLRGVKLSLKGGGPEFKFQRCSHFF 410 (482)
T ss_pred CCccchhheeeeeeeeeEeecccCccHHHHHHHHHHHHhcCCccccCcchhhhhhhcceeEeecCCCCccccccccceee
Confidence 455689999999999999999999999999999999865443 22 34678999999999865322 122455677
Q ss_pred EEEEEEeeec-CCCCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 192 RVRFLSFLGI-GHNVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 192 ~vr~iSF~gv-gkd~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
++++|||||. +||.++||||+ |+...+|.||||.++.+..+|+++|++|++
T Consensus 411 ~lknisfc~~hpr~n~~~gfitkhp~~~rfachVfks~es~rpvA~sVgRaF~ 463 (482)
T KOG3775|consen 411 QLKNISFCGCHPRNNCYFGFITKHPLLSRFACHVFKSQESTRPVAESVGRAFQ 463 (482)
T ss_pred EecccceeccccccceEEEeeccchhhhheeeeeeecccCChHHHHHHHHHHH
Confidence 9999999999 99999999999 999999999999999999999999999973
No 18
>KOG3536|consensus
Probab=99.76 E-value=9.9e-20 Score=165.72 Aligned_cols=127 Identities=17% Similarity=0.209 Sum_probs=115.5
Q ss_pred CCCCCCCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC-----CCCCceeeEEEEcCCeEEEEecCCCcCcee
Q psy3532 113 PQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV-----PQHLWQDVNIAVAPSMITIHSTDEETGGTL 187 (242)
Q Consensus 113 ~~~fp~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~-----~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~ 187 (242)
....|....+..-.|.++|||+++|++|+|.||..+|++.+..+. .+++.++|+++|++.++.|.+..|. ++
T Consensus 35 w~~t~e~l~~g~v~y~~kflg~~ev~qpkG~~vv~~a~r~~rr~~~~kkseg~k~~kvE~~Isi~gviI~~~~T~---~v 111 (321)
T KOG3536|consen 35 WTHTRETLIEGHVPYSAKFLGMTEVEQPKGTDVVREAIRAIRRTNPFKKSEGEKLQKVELSISIQGVIIRDLGTM---AV 111 (321)
T ss_pred cccchhhhhcccHHHHHHhcccccccCCCccHHHHHHHHhhhhcccccccccccccceeeeeccceeEEeecccc---cc
Confidence 346677777777889999999999999999999999999997553 4578999999999999999999998 99
Q ss_pred eeeEEEEEEEeeecCC-CCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 188 MAECRVRFLSFLGIGH-NVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 188 l~ec~vr~iSF~gvgk-d~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+++|++++||||.-+| +.|.|.||+ .+.++.++||+|.|++-|.++..+|+.|++
T Consensus 112 ~~~~~l~rIs~caddk~~kR~fsfIar~~es~~hlc~~f~s~Kla~~iTltigqaFd 168 (321)
T KOG3536|consen 112 KHNFPLYRISYCADDKLAKRAFSFIARMTESQSHLCVAFDSLKLADDITLTIGQAFD 168 (321)
T ss_pred eecCChhhhhHhHhHHHHHHHHHHHHHhcccCCceEEEeehhhhcchHHHHHHhhcc
Confidence 9999999999999999 899999999 667899999999999999999999999974
No 19
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.76 E-value=5.6e-18 Score=142.56 Aligned_cols=117 Identities=18% Similarity=0.286 Sum_probs=99.4
Q ss_pred cceeEEEEeeeeeEecCC-------chhhHHHHHHHHHHhcCCCC-----------------Cc--eeeEEEEcCCeEEE
Q psy3532 123 PKKILRAQYLGSIQVSKP-------GGMDILNNAIDTLVSTVPQH-----------------LW--QDVNIAVAPSMITI 176 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~-------~G~dVln~Ai~~i~~~~~~~-----------------~w--~pv~l~Vs~~~i~i 176 (242)
..-.|.|+|||++||.++ ++++|..|||.++....+.. +| .+|.|+||..+|++
T Consensus 9 ~GV~y~vrYlG~~eV~~Smr~~~~~~Rtqv~rEaI~rV~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~V~l~IS~~~v~~ 88 (160)
T cd01209 9 PGVSYLVRYMGCVEVLQSMRALDFETRTQVTRECISLVCEAVGGAKAATERNLNSILGRSNLKFAGMPITINVSSSSLNL 88 (160)
T ss_pred CCcEEEEEEeeEEeehhhcccCCcchhHHHHHHHHHHHHhccccccccccccccccccCccccccCceEEEEEEeeEEEE
Confidence 345799999999999986 99999999999998653222 22 46999999999999
Q ss_pred EecCCCcCceeeeeEEEEEEEeeec-CCC-CceEEEEEeCCCCceEEEEEEcCC-CchHHHHHHHHHhC
Q psy3532 177 HSTDEETGGTLMAECRVRFLSFLGI-GHN-VKQCAFIMHTAQDLFIAHVFVTEP-SSGALCKTIEAACK 242 (242)
Q Consensus 177 ~~~~~~~~~e~l~ec~vr~iSF~gv-gkd-~k~FafI~~~~~~~f~CHVF~ce~-~A~~lseaV~aAc~ 242 (242)
.+.++. +++.+..+++|||+.- ++| ..+||||+....+...||||.|+. -|..|..|||.|++
T Consensus 89 ~~~~t~---~ii~~H~l~~ISfaa~gd~d~~~~~ayIAKd~~~~r~ChVf~~~~~lAq~Ii~TIGQAF~ 154 (160)
T cd01209 89 MAQDCK---QIIANHHMQSISFASGGDPDTAEYVAYIAKNPDNQRACHVLECPEGLAQDLISTIGQAFE 154 (160)
T ss_pred eccCch---hHHhcCCCcceEEEeCCCCCcceeEEEEEcCCCCCceeEEEEcCCchHHHHHHHHHHHHH
Confidence 998776 9999999999999997 445 589999997666777899999964 79999999999974
No 20
>KOG3537|consensus
Probab=99.75 E-value=5.3e-18 Score=160.41 Aligned_cols=114 Identities=17% Similarity=0.274 Sum_probs=103.1
Q ss_pred cceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecC
Q psy3532 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIG 202 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvg 202 (242)
....|.|||||+|+|....||.|..+|+++|..+++ +..+..|.||..|+.|.|++++ .+|++..|..||||+-+
T Consensus 35 gtCsF~VkYLG~VEV~ESRGM~vCE~AlK~Lkas~r--k~VkavL~VS~DGLRVVD~~tk---~LiVDQTIEKVSFCAPD 109 (543)
T KOG3537|consen 35 GTCSFPVKYLGHVEVFESRGMQVCEDALKVLKASRR--KPVKAVLWVSGDGLRVVDDKTK---GLIVDQTIEKVSFCAPD 109 (543)
T ss_pred ceeeeeeeeeeeEEEecccCcHHHHHHHHHHHHhcc--CcceeEEEEccCceEEeccCcc---ceeeeeeeeeeeccccc
Confidence 457899999999999999999999999999988654 3467789999999999999887 99999999999999999
Q ss_pred C-CCceEEEEE-eCCCCceEEEEEEcCCCch-HHHHHHHHHh
Q psy3532 203 H-NVKQCAFIM-HTAQDLFIAHVFVTEPSSG-ALCKTIEAAC 241 (242)
Q Consensus 203 k-d~k~FafI~-~~~~~~f~CHVF~ce~~A~-~lseaV~aAc 241 (242)
| .+|-|.||+ |..++|++||-|+.-++.| .||.|||.|+
T Consensus 110 Rn~Dr~FsYICRDGttRRW~CH~FlA~KdsGERLSHAVGCAF 151 (543)
T KOG3537|consen 110 RNHDRGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAF 151 (543)
T ss_pred cccccceeEEeecCCcceeeeeeeeeecchhhHHHHHHHHHH
Confidence 9 599999999 7779999999999877666 8999999875
No 21
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=99.71 E-value=1.2e-16 Score=133.89 Aligned_cols=112 Identities=19% Similarity=0.289 Sum_probs=92.4
Q ss_pred eeEEEEeeeeeEecC------CchhhHHHHHHHHHHhcCCCC-CceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEE
Q psy3532 125 KILRAQYLGSIQVSK------PGGMDILNNAIDTLVSTVPQH-LWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLS 197 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~------~~G~dVln~Ai~~i~~~~~~~-~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iS 197 (242)
-.|.|+|||+++|-. .+=|.+-.+||.+|....+.. .-.+|.|.||-.+|.|.+.++. +++++..+|+||
T Consensus 5 v~f~a~YlG~t~~~~~~~~~~~tR~~~a~Eai~rik~~eG~~~~~t~V~L~IS~~gV~v~~~~tk---~im~~h~L~~IS 81 (156)
T cd01208 5 VLFRARYLGSTQLLCEKTPSKNVRMXQAQEAVSRIKAPEGESQPSTEVDLFISTEKIMVLNTDLQ---EIXMDHALRTIS 81 (156)
T ss_pred eEEEEEeeceeeeeecCCCChhhhHHHHHHHHHHHhccccCCCCCcEEEEEEEeCeEEEEecCcc---ceeccCcccceE
Confidence 469999999999743 346778889999998754332 2458999999999999999887 999999999999
Q ss_pred eeecCCCCceEEEEEeC---------------------CCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 198 FLGIGHNVKQCAFIMHT---------------------AQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 198 F~gvgkd~k~FafI~~~---------------------~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
||+..+| +|+||+.. ...++.||||.|++ |..|+.+||.|++
T Consensus 82 y~AD~~d--~~v~mAkr~~~~~~~~~~~~~~~~~~~~~~~~k~~ChVFes~~-Aq~Ia~TIGQAF~ 144 (156)
T cd01208 82 YIADIGD--LVVLMARRRIPRSSSQENSEASHPSQDGKRTPKXICHVFESDE-AQFIAQSIGQAFQ 144 (156)
T ss_pred EEecCCC--eEEEEEeccccccccccccccCCcccccccccceeEEEEecCc-HHHHHHHHHHHHH
Confidence 9986555 49999831 12458999999998 9999999999974
No 22
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain. Numb Phosphotyrosine-binding (PTB) domain. Numb is a membrane associated adaptor protein, which is a determinant of asymmetric cell division. Numb has an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.69 E-value=9e-17 Score=132.80 Aligned_cols=71 Identities=24% Similarity=0.446 Sum_probs=64.7
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCc-hh----hHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP-AR----TIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~-a~----~~a~Af~ 71 (242)
+.++.++|+|+|++|+.+|+.+||++|+||+.++++.+.||||++|+.+++|.||||.|... +. ++..||.
T Consensus 54 L~VS~~Gi~vvd~~Tk~~i~~~~i~~ISfca~D~~d~r~FayIakd~~~~r~~CHvF~~~k~sa~~i~~avG~AF~ 129 (138)
T cd01268 54 LWVSGDGLRVVDEKTKGLIVDQTIEKVSFCAPDRNFDRGFSYICRDGTTRRWMCHGFLAVKDTGERLSHAVGCAFA 129 (138)
T ss_pred EEEecCcEEEEecCCCcEEEEEeEEEEEEEecCCCCCcEEEEEecCCCcccEEEEEEEeeccchhHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999754 33 7777775
No 23
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.68 E-value=1e-15 Score=123.67 Aligned_cols=97 Identities=20% Similarity=0.275 Sum_probs=81.6
Q ss_pred EEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEc--CCe-EEEEecCCCcCceeeeeEEEEEEEeeecCC-
Q psy3532 128 RAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVA--PSM-ITIHSTDEETGGTLMAECRVRFLSFLGIGH- 203 (242)
Q Consensus 128 ~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs--~~~-i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk- 203 (242)
.++|||++.|..|+++..+-++|..+..++ +....+|.|.|. +.| |.++|+.++ ..|...+|++|+||+.|+
T Consensus 5 ~vtYLGct~V~aP~sE~e~~r~m~~l~~~s-~~~~i~Vtl~Vp~~seG~V~l~D~~t~---~~ias~~I~rI~fC~rG~~ 80 (125)
T cd01211 5 NVTYLGCSQLVNPDSENEMKRLMKVLDEQS-GAQTINVTLVVPNNIEGTVKLIDAQSN---KVIASFSIVNIRFCIRGES 80 (125)
T ss_pred CcEEeeeEEecCCCCHHHHHHHHHHHHhhc-ccCCeEEEEEecCCCCceEEEEcCCCC---cEEEEEEEEEEEEEEecCC
Confidence 589999999999999999989998775433 333678888876 555 889998876 889999999999999966
Q ss_pred ---CCceEEEEE-eCCCCceEEEEEEcCC
Q psy3532 204 ---NVKQCAFIM-HTAQDLFIAHVFVTEP 228 (242)
Q Consensus 204 ---d~k~FafI~-~~~~~~f~CHVF~ce~ 228 (242)
+.+-|||.. |..++.|+||||.|+.
T Consensus 81 ~t~e~~cFAft~s~~~se~~qcHVFrC~~ 109 (125)
T cd01211 81 STSENNCFAFTFTHKISILFQCHVFRCSI 109 (125)
T ss_pred CCcccccEEEEeecCCceEEEEEEEecCC
Confidence 356899999 6678999999999976
No 24
>PF14719 PID_2: Phosphotyrosine interaction domain (PTB/PID)
Probab=99.66 E-value=1.1e-15 Score=131.60 Aligned_cols=111 Identities=16% Similarity=0.276 Sum_probs=93.9
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCC-CceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC-
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQH-LWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH- 203 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~-~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk- 203 (242)
.|.|+|||++++..++|.+-..+||..|..+.... .-.++.|+|++.||.+.+.+ ..+.+..+++||||+.|+
T Consensus 1 ty~V~YLG~~~t~~~~Gegct~kpV~~lw~~~~~~k~~~~m~L~V~~~Gik~~~~~-----~~~~~y~i~RItYC~ad~~ 75 (182)
T PF14719_consen 1 TYKVRYLGNVLTRGAKGEGCTEKPVSKLWRRYKQGKPDKKMKLTVSPSGIKMETKD-----KGLTEYWIHRITYCTADPQ 75 (182)
T ss_pred CeEEEEecceecccccccchHHHHHHHHHHHhccCCCCceeEEEEcCCceEEEECC-----CCceEEEeeeEEEecCCCC
Confidence 49999999999999999999999999999876543 34678999999999998754 457889999999999976
Q ss_pred CCceEEEEE-eCC---CCceEEEEEEcCCC--chHHHHHHHHHh
Q psy3532 204 NVKQCAFIM-HTA---QDLFIAHVFVTEPS--SGALCKTIEAAC 241 (242)
Q Consensus 204 d~k~FafI~-~~~---~~~f~CHVF~ce~~--A~~lseaV~aAc 241 (242)
.+++|++|. |.+ ...++||+|+|++. |.+|+.++..|+
T Consensus 76 ~PrVFawIyrhe~~~~~~~L~CHAvlC~k~~~Akama~~L~~af 119 (182)
T PF14719_consen 76 HPRVFAWIYRHEGKKLKVELRCHAVLCSKEEKAKAMARALYQAF 119 (182)
T ss_pred CCceEEEEEEcccCCCcccEEEEEEEECCHHHHHHHHHHHHHHH
Confidence 799999999 665 37899999999885 457777766654
No 25
>cd01213 tensin Tensin Phosphotyrosine-binding (PTB) domain. Tensin Phosphotyrosine-binding (PTB) domain. Tensin is a a focal adhesion protein, which contains a C-terminal SH2 domain followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.65 E-value=1.1e-15 Score=126.24 Aligned_cols=105 Identities=19% Similarity=0.255 Sum_probs=84.6
Q ss_pred EEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC-C-
Q psy3532 127 LRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH-N- 204 (242)
Q Consensus 127 f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk-d- 204 (242)
++++||||++|+..+|.+++.+||..++......+.++|.+.||..||+++|...+ .--.-.+++.+|||||++. |
T Consensus 8 ~nv~yLgS~evesltg~~av~kAv~~~l~~~~~~~~t~vh~kVS~qGItLtDn~rk--~ffrrhypl~~Vs~ca~dp~n~ 85 (138)
T cd01213 8 CNVLYLGSVDTESLTGNEAIKKAIAQCSGQAPDPQATEVHFKVSSQGITLTDNTRK--KFFRRHYKVDSVIFCAIDPEER 85 (138)
T ss_pred cceeeeeeEeeccccCcHHHHHHHHHHHhcCCCCCceEEEEEEEcCCeeeeccccc--eeehhhCCcCeEEEEeeCCccc
Confidence 78999999999999999999999999997555556678999999999999997654 1122347889999999944 4
Q ss_pred ----------CceEEEEE-eCC-CCceEEEEEEcCCCchHH
Q psy3532 205 ----------VKQCAFIM-HTA-QDLFIAHVFVTEPSSGAL 233 (242)
Q Consensus 205 ----------~k~FafI~-~~~-~~~f~CHVF~ce~~A~~l 233 (242)
.++||||+ +++ ++.+.||||.-.....+.
T Consensus 86 ~~~~~~~~~~kriFgFVar~~~~~~~~~ChvF~e~~~~qpa 126 (138)
T cd01213 86 MWENEGAIAKARIFAFVARIPHSSTDNACHVFAELEPEQPA 126 (138)
T ss_pred cccccccccccEEEEEEEecCCCCCCeeEEEeccCCCCCCH
Confidence 69999999 655 478999999854334333
No 26
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.64 E-value=5.2e-16 Score=126.28 Aligned_cols=72 Identities=32% Similarity=0.562 Sum_probs=66.0
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCc--hh----hHHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP--AR----TIANTLRDI 73 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~--a~----~~a~Af~~~ 73 (242)
.++.++|+++|+.++.+++.+||++|+||+.|+++.+.||||++|..++.|+||||.|+.+ |. +|++||+..
T Consensus 50 ~IS~~gi~i~d~~t~~~l~~~~i~~ISfc~~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~AF~~a 127 (132)
T cd01267 50 DISIKGVKIIDPKTKTVLHGHPLYNISCCAQDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQAFELA 127 (132)
T ss_pred EEEcCcEEEEeCCCCcEEEEcccceEEEEecCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999988 55 777777744
No 27
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.57 E-value=3.9e-14 Score=115.56 Aligned_cols=115 Identities=14% Similarity=0.295 Sum_probs=98.0
Q ss_pred eeEEEEeeeeeEecCC-----chhhHHHHHHHHHHhcCC-C----CCce---eeEEEEcCCeEEEEecCCCcCceeeeeE
Q psy3532 125 KILRAQYLGSIQVSKP-----GGMDILNNAIDTLVSTVP-Q----HLWQ---DVNIAVAPSMITIHSTDEETGGTLMAEC 191 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~-----~G~dVln~Ai~~i~~~~~-~----~~w~---pv~l~Vs~~~i~i~~~~~~~~~e~l~ec 191 (242)
+.|.|.-||.++++.- +....+|.+|+.|...+. . ..|. ...|.+....+++.|+.+. .+|+..
T Consensus 2 ~~faVrslGWve~~Eedl~p~~sS~avn~cI~~Ls~~~~d~~d~~g~wgeGk~~~m~L~~g~lkLiDP~~~---s~LhSq 78 (138)
T cd01272 2 IRFAVRSLGWVEIAEEDLTPEKSSKAVNKCIVDLSLGRNDMLDVVGRWGDGKDLFMDLDEGALKLIDPENL---TVLHSQ 78 (138)
T ss_pred cceeeeccceEEcchhhcCCcccHHHHHHHHHHHhccccccccCcCcccCcceeEEEecCCceEeeCCCCC---ceEEee
Confidence 4699999999999763 567778999999965331 1 1453 4678889999999999877 889999
Q ss_pred EEEEEEeeecCC-CCceEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 192 RVRFLSFLGIGH-NVKQCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 192 ~vr~iSF~gvgk-d~k~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+|..|-|||+|+ |.+-|||.+ |..++.|.||||-|+..|.+|+.|+..-|+
T Consensus 79 PI~~IRvwGvGrdngrdFA~vard~~T~~~~CHVFRC~~pak~ia~~l~~~c~ 131 (138)
T cd01272 79 PIHTIRVWGVGRDNGRDFAYVIRDERTRGSNCHVFRCDTRAKDIATELRRICR 131 (138)
T ss_pred eeeEEEEEEecCCCCcceEEEeecCCCceeEEEEEEcCCCCccchHHHHHHHH
Confidence 999999999999 688899999 777999999999999999999999998884
No 28
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.55 E-value=1.8e-14 Score=113.23 Aligned_cols=74 Identities=35% Similarity=0.622 Sum_probs=66.4
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHh
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDIC 74 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~ 74 (242)
|.++.++|+|+|++++.+|.++||.+|+||++|+++.+.|+||+++.+...++||||+|+..|..|++++..+.
T Consensus 46 l~vs~~gv~l~d~~~~~~l~~~~l~~Is~~~~~~~~~~~F~~i~~~~~~~~~~CHvF~c~~~a~~i~~~l~~af 119 (123)
T cd00934 46 LSVSSDGVKLIDPKTKEVLASHPIRRISFCAADPDDLRIFAFIAREPGSSRFECHVFKCEKVAEPIALTLGQAF 119 (123)
T ss_pred EEEEcCcEEEEeCCCCcEEEeeccceEEEEECCCCCCcEEEEEEEcCCCCcEEEEEEEeCchHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999989999999999999776666666543
No 29
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=99.54 E-value=3.4e-14 Score=113.70 Aligned_cols=82 Identities=30% Similarity=0.549 Sum_probs=70.4
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhhhHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICKKIMIE 80 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~~~~~e 80 (242)
|.++.++|+++|..++++++.+||.+|+||+.++++.+-|+||++|.+.+.++||||.|+.+|..++.++..+.+..+.+
T Consensus 48 l~vs~~gv~v~~~~~~~~l~~~~l~~Isf~~~~~~~~~~F~fI~~~~~~~~~~CHvF~c~~~a~~i~~~i~~aF~~a~~~ 127 (134)
T smart00462 48 LSISSRGVKLIDEDTKAVLHEHPLRRISFCAVGPDDLDVFGYIARDPGSSRFACHVFRCEKAAEDIALAIGQAFQLAYEL 127 (134)
T ss_pred EEEECCcEEEEECCCCeEEEEccccceEEEecCCCCCcEEEEEeeCCCCCeEEEEEEEcCchHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999988899999999988999999999998876666666655544444
Q ss_pred Hh
Q psy3532 81 RS 82 (242)
Q Consensus 81 r~ 82 (242)
..
T Consensus 128 ~~ 129 (134)
T smart00462 128 KL 129 (134)
T ss_pred HH
Confidence 43
No 30
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b is an amyloid-beta precursor protein interacting protein. It consists of ankyrin repeats, a SAM domain and a C-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.53 E-value=2.6e-14 Score=116.53 Aligned_cols=70 Identities=29% Similarity=0.443 Sum_probs=63.1
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCch--h----hHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPA--R----TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a--~----~~a~Af~~ 72 (242)
.++.++|+++|++|+.+|+++||++|+||+.++++.+-|+||++|.+ .+|.||||.|...+ . +|++||+.
T Consensus 46 ~IS~~Gv~v~d~~tk~~i~~~~i~~ISf~~~D~~d~~~FayIakd~~-~~~~CHvF~~~~~~~A~~I~~tigqAF~~ 121 (127)
T cd01274 46 DLTCNGVKFIDETFKTLIDGHGIYNIRCVCQDREDLNFFAYITKDTE-NRHYCHVFCVLTSGLAAEIITTLGQAFEV 121 (127)
T ss_pred EEeCCeEEEEECCCCeEEEEeeeeEEEEEecCCCCceEEEEEeeCCC-CCEEEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999988888788999999998 89999999997763 2 88899874
No 31
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.52 E-value=1e-13 Score=112.29 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=95.3
Q ss_pred eeEEEEeeeeeEecCCch-hhHHHHHHHHHHhcC--CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec
Q psy3532 125 KILRAQYLGSIQVSKPGG-MDILNNAIDTLVSTV--PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI 201 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G-~dVln~Ai~~i~~~~--~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv 201 (242)
++|+|.|-|.+-|...+. -.|+.++|+++...+ .+..-+.+.+.|+-++|.+++++++ .++.+.+.+.|||||-
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~li~e~I~K~~~~~~~kr~~nrtm~~~I~~~~v~lispdtK---~vl~~k~f~dISsC~q 78 (129)
T cd01269 2 QKFEVLYCGRVTVTHKKAPSSLIDDCIEKFSLHEQQRLKDNRTMLFQVGRFEINLISPDTK---SVVLEKNFKDISSCSQ 78 (129)
T ss_pred CeeEEEEEeeEEEeeccCChHHHHHHHHHhhhhhhhhccCCcEEEEEEeccceEEEcCCcc---eEEEecCccccchhhc
Confidence 689999999999987664 567899999997543 3445567999999999999999998 9999999999999999
Q ss_pred CC-CCceEEEEE-eCC---CCceEEEEEEc--CCCchHHHHHHHHHh
Q psy3532 202 GH-NVKQCAFIM-HTA---QDLFIAHVFVT--EPSSGALCKTIEAAC 241 (242)
Q Consensus 202 gk-d~k~FafI~-~~~---~~~f~CHVF~c--e~~A~~lseaV~aAc 241 (242)
|. |.++||||+ ++. .++|.||||.| +.-|.+|--|++.|+
T Consensus 79 g~~~~dhFgFIcrEs~~~~~~~f~CyVFqc~Se~la~eI~lti~QAF 125 (129)
T cd01269 79 GIKHVDHFGFICRESPEPGLSQYICYVFQCADESLVDEVMLTLKQAF 125 (129)
T ss_pred CCCCcceEEEEeccCCCCCcceEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 87 899999999 443 36699999996 445567777777775
No 32
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=99.47 E-value=2.3e-13 Score=109.34 Aligned_cols=75 Identities=32% Similarity=0.655 Sum_probs=64.1
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEee-CCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGV-GRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~-g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
|.++.++|+|+|++++.+|.++||.+|+||++ ++++.+.|+|+++++.+..++||||+|+..|..|.+++..+.+
T Consensus 56 l~vs~~gI~v~~~~t~~~l~~~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~~A~~i~~~i~~aF~ 131 (140)
T PF00640_consen 56 LNVSSDGIKVIDPDTGEVLMSHPIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCEDQAQEICQAIGQAFE 131 (140)
T ss_dssp EEEETTEEEEEETTTTCEEEEEEGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EEEcCCeEEEecCccccccccCCccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhhHHHHHHHHHHHHHH
Confidence 35678899999999999999999999999999 7777777999999999999999999999966655555554443
No 33
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.44 E-value=3e-13 Score=111.88 Aligned_cols=76 Identities=21% Similarity=0.440 Sum_probs=66.6
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCc-ceeEeEEEeecCchh----hHHHHHHHHhhh
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRST-RRHMCHVFRCDMPAR----TIANTLRDICKK 76 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t-~~~~CHVFrc~~~a~----~~a~Af~~~~~~ 76 (242)
.++.+.|+++|+.|+.+++.+||++|+||+.++++.+-|+||++|..+ +.|.||||.|+..|. +++.||...-++
T Consensus 60 ~IS~~GI~v~d~~t~~~~~~~~i~~ISfca~d~~~~r~FayIak~~~~~~~~~ChvF~s~~~A~~I~~tigqAF~~ay~~ 139 (142)
T cd01273 60 RISIDGVIIAEPKTKAPMHTFPLGRISFCADDKDDKRMFSFIAKAEGASGKHSCFVFTSEKLAEDITLTIGQAFDLAYRK 139 (142)
T ss_pred EEECCeEEEEEcCCCcEEEEcCcceEEEEecCCCCCeEEEEEecCCCCCCcEEEEEEeccchHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999876 899999998876565 888888755444
Q ss_pred H
Q psy3532 77 I 77 (242)
Q Consensus 77 ~ 77 (242)
.
T Consensus 140 f 140 (142)
T cd01273 140 F 140 (142)
T ss_pred H
Confidence 3
No 34
>cd01212 JIP JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JIP is a mitogen-activated protein kinase scaffold protein. JIP consists of a C-terminal SH3 domain, followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.42 E-value=5.2e-13 Score=111.63 Aligned_cols=79 Identities=15% Similarity=0.449 Sum_probs=67.0
Q ss_pred CcccCCceEEEcCCCCce-----eee-EeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh----hHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTV-----LNT-QPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR----TIANTL 70 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~-----l~s-~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~----~~a~Af 70 (242)
|.++.++|+|+|+.++.. ++. |+|.+|+|||.+++|.+.|+||++|..++.|.||||.+...+. ++..||
T Consensus 49 L~VS~~Girl~D~~t~~~~~~~~~~~f~~l~nISFCa~d~~~~r~F~FIak~~~~~~~~CHVF~s~~~~~~I~~aIG~AF 128 (148)
T cd01212 49 LEISDRGLRMVDRSGPNKDKKPCIDFFYSLKNISFCGFHPRDHRYFGFITKHPLLQRFACHVFKSSESTRPVAEAVGRAF 128 (148)
T ss_pred EEEecCcEEEEecCCCcccccchhhccccccceEEEEEcCCCCcEEEEEeccCCCCceEEEEEEeCCcchHHHHHHHHHH
Confidence 457899999999999853 333 4699999999999999999999999999999999999987776 888888
Q ss_pred HHHhhhHHH
Q psy3532 71 RDICKKIMI 79 (242)
Q Consensus 71 ~~~~~~~~~ 79 (242)
...-.+.|.
T Consensus 129 ~~~y~~~~~ 137 (148)
T cd01212 129 QRFYQEFIA 137 (148)
T ss_pred HHHHHHHHh
Confidence 876555443
No 35
>KOG3537|consensus
Probab=99.42 E-value=3.1e-13 Score=128.37 Aligned_cols=60 Identities=28% Similarity=0.507 Sum_probs=56.9
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecC
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDM 61 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~ 61 (242)
-++.|+||+||.+|+.+|.+|.|++++||+.+|+..+.|+|||||+.|++|+||.|..-.
T Consensus 78 ~VS~DGLRVVD~~tk~LiVDQTIEKVSFCAPDRn~Dr~FsYICRDGttRRW~CH~FlA~K 137 (543)
T KOG3537|consen 78 WVSGDGLRVVDDKTKGLIVDQTIEKVSFCAPDRNHDRGFSYICRDGTTRRWMCHGFLACK 137 (543)
T ss_pred EEccCceEEeccCccceeeeeeeeeeeccccccccccceeEEeecCCcceeeeeeeeeec
Confidence 478999999999999999999999999999999999999999999999999999998743
No 36
>cd01270 DYC-1 DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 contains an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domains of both SHC and IRS-1, for example, bind to a NPXpY sequence. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.38 E-value=1.2e-12 Score=108.55 Aligned_cols=70 Identities=20% Similarity=0.354 Sum_probs=62.4
Q ss_pred cccCCceEEEcCC------------CCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCc--hh---
Q psy3532 2 DLDEGALKLTDPE------------NLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP--AR--- 64 (242)
Q Consensus 2 ~~~~~~l~lvD~~------------~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~--a~--- 64 (242)
.++-++|+++|+. ++.+|..+||++|+||+.++++.+-||||++|+.++.|.||||.|... |.
T Consensus 48 ~VS~~Gv~v~d~k~~~~~~~~~~~~tk~li~~~~i~rISf~a~D~~~~k~FayIakd~~~~~~~ChvF~~~k~~~A~~I~ 127 (140)
T cd01270 48 HVSVDGVKVVLKKKKRKKKNWTWDESKILVMNHPIYRIFYVSHDSQDLKIFSYIARDGASNTFKCNVFKSHKKSQAMRIV 127 (140)
T ss_pred EEecCcEEEEecccccccccccccCcccEEEecCeeEEEEeecCCCCCcEEEEEecCCCCCceEEEEEEEcChhhHHHHH
Confidence 3678899999975 678999999999999999999999999999999999999999999974 33
Q ss_pred -hHHHHHH
Q psy3532 65 -TIANTLR 71 (242)
Q Consensus 65 -~~a~Af~ 71 (242)
+|++||.
T Consensus 128 ~TIGqAFe 135 (140)
T cd01270 128 RTVGQAFE 135 (140)
T ss_pred HHHHHHHH
Confidence 7888887
No 37
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 (IPR000980 from INTERPRO) domain and a region similar to the tumour suppressor PTEN []. The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif []. ; GO: 0005515 protein binding; PDB: 3HQC_A 2DKQ_A 2LOZ_A 2CY5_A 2CY4_A 2GJY_A 1WVH_A.
Probab=99.28 E-value=1.3e-10 Score=95.24 Aligned_cols=112 Identities=16% Similarity=0.297 Sum_probs=94.1
Q ss_pred EEEEeeeeeEecCCchhhHHHHHHHHHHhc-CCCCCc-eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCC
Q psy3532 127 LRAQYLGSIQVSKPGGMDILNNAIDTLVST-VPQHLW-QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHN 204 (242)
Q Consensus 127 f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~-~~~~~w-~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd 204 (242)
|+|.||++..++.-.|...+.+||.++..- ..+.-| +.+.+.|++.+|+++|..+. +.+...++..|+|||.+-+
T Consensus 2 ~~V~hL~T~~~e~~~g~~~v~d~i~~l~~l~~~~~~w~q~~~lkV~~~~v~L~D~~~k---~~le~yPl~~I~~c~~~~~ 78 (131)
T PF08416_consen 2 YNVEHLATFDVESLTGPQAVEDAIRRLKLLEAKGRIWPQEMHLKVSDQGVTLTDIETK---EFLEHYPLSSIQFCGADPD 78 (131)
T ss_dssp EEEEEEEEEEECTTSCCCHHHHHHHHHHHHHCSS-SS-EEEEEEEETTEEEEEESSTS---SECEEEECCCEEEEEEETT
T ss_pred cEEEEEEEEEcCCCcchhhHHHHHHHHHhhccCCCcccEEEEEEEeCCeEEEEECccc---chhhhCCHhHeeeccccCC
Confidence 899999999999999999999999988642 344556 57899999999999998776 5568899999999998443
Q ss_pred ----CceEEEEE-eCCCCceEEEEEEc-CCCchHHHHHHHHHh
Q psy3532 205 ----VKQCAFIM-HTAQDLFIAHVFVT-EPSSGALCKTIEAAC 241 (242)
Q Consensus 205 ----~k~FafI~-~~~~~~f~CHVF~c-e~~A~~lseaV~aAc 241 (242)
+.+|||++ .++...-.+|+|.| |-.|.-++++|..|.
T Consensus 79 ~~~~~~il~fV~r~~~~~~~~~H~Fqc~ev~a~~~~~~I~~~v 121 (131)
T PF08416_consen 79 SRRYNSILGFVVRKPGSSKPNVHLFQCEEVDAEQPAEDIVSAV 121 (131)
T ss_dssp TTEECBEEEEEEEETTCCCEEEEEEEETCTCTTSHHHHHHHHH
T ss_pred CCccceEEEEEEecCCCCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35999999 66677888899999 777889999998774
No 38
>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.27 E-value=1.6e-11 Score=99.72 Aligned_cols=71 Identities=23% Similarity=0.524 Sum_probs=63.5
Q ss_pred ccCCceEEEcCCC-CceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 3 LDEGALKLTDPEN-LTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 3 ~~~~~l~lvD~~~-~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
++..+|.++|+++ ..+++.++|..|+|+|+|+ |-+-||||+ |...+.|.||||.|+..+.+++.|...+|.
T Consensus 46 vaps~v~v~~~~~~~~~l~ecrVr~lSF~GvgK-d~k~fafI~-~~~~~~f~ChVF~ce~~A~~ls~av~aAc~ 117 (124)
T cd01271 46 VAPSTITVISEKNEEEVLVECRVRYLSFLGIGK-DVHTCAFIM-DTGNQRFECHVFWCEPNAGNVSKAVEAACK 117 (124)
T ss_pred eCCceEEEEccCccceeeeeeeEEEeccccCCC-CccEEEEEE-ecCCCcEEEEEEEecCChHHHHHHHHHHHH
Confidence 5678999999986 6799999999999999997 556899999 567999999999999999999999888775
No 39
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=99.12 E-value=1.8e-10 Score=95.47 Aligned_cols=66 Identities=23% Similarity=0.376 Sum_probs=56.6
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh-------hHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR-------TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~-------~~a~Af~ 71 (242)
-++-++|+++|+.|+.+|+++||++|+||++++.|.|-|+||+++.++ ||.|-|-.-++ +++.||.
T Consensus 58 ~IS~dGi~v~D~~T~~ll~~~~i~rISfca~D~~d~r~FsyI~~~~~~----~H~f~~~k~~k~A~~i~lti~~aF~ 130 (139)
T cd01215 58 QINIDGIKVLDEKTGAVLHHHPVHRISFIARDSTDARAFGYVYGEPGG----KHRFYGIKTAQAADQVVLAIRDLFQ 130 (139)
T ss_pred EEccCCEEEEcCCCCcEEEeeceeeEEEEecCCCCCeEEEEEEEcCCC----cEEEEEEEhHHcchhhhhhHHHHHH
Confidence 468899999999999999999999999999999999999999999776 67776644332 7777776
No 40
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.03 E-value=3e-10 Score=92.17 Aligned_cols=69 Identities=17% Similarity=0.390 Sum_probs=59.9
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcce---eEeEEEeecCchh------hHHHHHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRR---HMCHVFRCDMPAR------TIANTLR 71 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~---~~CHVFrc~~~a~------~~a~Af~ 71 (242)
+....|+|+||+++++++..+..+|++|++|.++.+-|+|||+|.+... |.||||-|.-.+- +|.+||.
T Consensus 49 I~~~~v~lispdtK~vl~~k~f~dISsC~qg~~~~dhFgFIcrEs~~~~~~~f~CyVFqc~Se~la~eI~lti~QAF~ 126 (129)
T cd01269 49 VGRFEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESPEPGLSQYICYVFQCADESLVDEVMLTLKQAFS 126 (129)
T ss_pred EeccceEEEcCCcceEEEecCccccchhhcCCCCcceEEEEeccCCCCCcceEEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999999999987555 9999999976543 6666665
No 41
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.77 E-value=6.7e-09 Score=87.81 Aligned_cols=68 Identities=21% Similarity=0.464 Sum_probs=57.3
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcc-eEEEEeeCCcceeEeEEEeecC-chh----hHHHHHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD-FAYVARDRSTRRHMCHVFRCDM-PAR----TIANTLR 71 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~-Fa~v~~d~~t~~~~CHVFrc~~-~a~----~~a~Af~ 71 (242)
++...|+++|++++.+|+..++.+|+|++-|..+..+ |+||++|++ ..+.||||.|.. .|. +|.+||.
T Consensus 81 IS~~~v~~~~~~t~~ii~~H~l~~ISfaa~gd~d~~~~~ayIAKd~~-~~r~ChVf~~~~~lAq~Ii~TIGQAF~ 154 (160)
T cd01209 81 VSSSSLNLMAQDCKQIIANHHMQSISFASGGDPDTAEYVAYIAKNPD-NQRACHVLECPEGLAQDLISTIGQAFE 154 (160)
T ss_pred EEeeEEEEeccCchhHHhcCCCcceEEEeCCCCCcceeEEEEEcCCC-CCceeEEEEcCCchHHHHHHHHHHHHH
Confidence 4667899999999999999999999999987777654 999999987 455899999965 233 7888886
No 42
>KOG3535|consensus
Probab=98.65 E-value=8.2e-08 Score=91.54 Aligned_cols=94 Identities=14% Similarity=0.233 Sum_probs=82.4
Q ss_pred ceeEEEEeeeeeEecCCchhhHHHHHHHHHH---h--cCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEe
Q psy3532 124 KKILRAQYLGSIQVSKPGGMDILNNAIDTLV---S--TVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSF 198 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~---~--~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF 198 (242)
.-+|.+|.+|.-.|+++.|-.+..++|.+++ + ++.+...+...|+||-.||+|+|.++. -++|+..|.+|||
T Consensus 48 GV~YKaKLIGiddV~~ARGDkmcqdsMmklKGvva~~rs~G~HKqrI~l~Is~~GIKI~DEKtG---av~H~hpV~~ISf 124 (557)
T KOG3535|consen 48 GVSYKAKLIGIDDVDKARGDKMCQDSMMKLKGVVAIIRSAGAHKQRITLQISIDGIKILDEKTG---AVLHNHPVSRISF 124 (557)
T ss_pred CeeeeeeeccccccchhhhhhHHHHHHHHhhhhhhhhhccccccceEEEEEeecceEEeecccc---ceeccCccceeee
Confidence 4679999999999999999999999999997 2 234567789999999999999998876 9999999999999
Q ss_pred eecCC-CCceEEEEE-eCCCCceE
Q psy3532 199 LGIGH-NVKQCAFIM-HTAQDLFI 220 (242)
Q Consensus 199 ~gvgk-d~k~FafI~-~~~~~~f~ 220 (242)
++=+- |.|-|||++ ..|+.+|.
T Consensus 125 IArD~tD~RAFGyVcG~eG~hkF~ 148 (557)
T KOG3535|consen 125 IARDSTDARAFGYVCGEEGKHKFY 148 (557)
T ss_pred eecccccccceeeeecCCCceeEE
Confidence 99866 999999999 66776654
No 43
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=98.63 E-value=1e-07 Score=80.27 Aligned_cols=72 Identities=21% Similarity=0.387 Sum_probs=57.5
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCC--------------------cceeEeEEEeecCc
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRS--------------------TRRHMCHVFRCDMP 62 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~--------------------t~~~~CHVFrc~~~ 62 (242)
++-+.|.++|++++.+|+.+|+++|+|++ |.+..|+|++++.. +..+.||||.|+.
T Consensus 56 IS~~gV~v~~~~tk~im~~h~L~~ISy~A---D~~d~~v~mAkr~~~~~~~~~~~~~~~~~~~~~~~~k~~ChVFes~~- 131 (156)
T cd01208 56 ISTEKIMVLNTDLQEIXMDHALRTISYIA---DIGDLVVLMARRRIPRSSSQENSEASHPSQDGKRTPKXICHVFESDE- 131 (156)
T ss_pred EEeCeEEEEecCccceeccCcccceEEEe---cCCCeEEEEEeccccccccccccccCCcccccccccceeEEEEecCc-
Confidence 56789999999999999999999999998 33445999998543 3458999999996
Q ss_pred hh----hHHHHHHHHhhhHH
Q psy3532 63 AR----TIANTLRDICKKIM 78 (242)
Q Consensus 63 a~----~~a~Af~~~~~~~~ 78 (242)
|. +|.+||.-.=++.+
T Consensus 132 Aq~Ia~TIGQAF~lAY~~fL 151 (156)
T cd01208 132 AQFIAQSIGQAFQVAYQEFL 151 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44 88888885444444
No 44
>cd01214 CG8312 CG8312 Phosphotyrosine-binding (PTB) domain. CG8312 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.62 E-value=1.2e-07 Score=78.07 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=51.8
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCC---cceeEeEEEeecCchh
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRS---TRRHMCHVFRCDMPAR 64 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~---t~~~~CHVFrc~~~a~ 64 (242)
.++..++++.|.. +.+..++|++|++|..+.+..+-|+||.++.. ...+.||+|-|+..+.
T Consensus 47 ~Vsp~GI~~~~~~--~~~~~~~i~RIsYCsad~~~p~VFa~I~r~~~~~~~~~l~CHAvlC~k~~~ 110 (133)
T cd01214 47 TVSASGLKAVTAQ--RGLTEYWAHRITYCVAPARYPKVFCWIYRHEGKHLKVELRCHAVLCSKPEK 110 (133)
T ss_pred EEcCCceEEEecc--ccceEEEEeeeeeecCCcCCCcEEEEEEeecccccCcceEEEEEEeCCHHH
Confidence 3567788999877 44789999999999999999888999999753 4689999999998665
No 45
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.56 E-value=1.2e-06 Score=73.22 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=75.9
Q ss_pred eeEEEEeeeeeEe-cCCchhhHHHHHHHHHHhcC--CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec
Q psy3532 125 KILRAQYLGSIQV-SKPGGMDILNNAIDTLVSTV--PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI 201 (242)
Q Consensus 125 ~~f~vkyLGsv~V-~~~~G~dVln~Ai~~i~~~~--~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv 201 (242)
.+|+|.||||.+- .+-.|.+-|.+=++.+--+. .+++...-.|+|++.|+.+....+.+..|. .-.++.+|.||..
T Consensus 2 c~f~V~yLGS~pl~dk~~sLqgiQEPLr~LY~se~~~~kKl~~gsL~Ics~GLrvk~s~~~~~~E~-~~fP~~~i~~~aA 80 (158)
T cd01217 2 CRCRVLYLGSLVPKDKKDGLQGIQEPLRQLYPSEVTPKKKGIDSWLSVWSNGLLLEISALAEKNET-LFFPIHNLHYCAA 80 (158)
T ss_pred ceEEEEEEcCcCCccccchhhhhhhHHHHhhhhccccccccccceEEEecCceEEEeccccccccc-cccccceeeEeeE
Confidence 4799999999884 55568887778888775221 245667788999999999976543211122 3357777777765
Q ss_pred ------C------------------------CCCceEEEEE--eCCCCceEEEEEEcCCC
Q psy3532 202 ------G------------------------HNVKQCAFIM--HTAQDLFIAHVFVTEPS 229 (242)
Q Consensus 202 ------g------------------------kd~k~FafI~--~~~~~~f~CHVF~ce~~ 229 (242)
+ -+..+||.|| -++....+||.|.|...
T Consensus 81 VkfVi~~~~~~~~~~~aFLPL~t~~~ni~~~~H~PiFA~vmR~t~~~kvLECHgFiCk~~ 140 (158)
T cd01217 81 VRFVISDGFKVDDGGAAFLPLDSPFANIPIHVHPPIFAAIMRRTTGPKVLECHGFICKST 140 (158)
T ss_pred EEEEeccCcccCCCcccccccCCChhhCCCcCCCCeEEEEEecCCCCceEEeeEEEeCCH
Confidence 4 4788999999 44589999999999876
No 46
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 (IPR000980 from INTERPRO) domain and a region similar to the tumour suppressor PTEN []. The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif []. ; GO: 0005515 protein binding; PDB: 3HQC_A 2DKQ_A 2LOZ_A 2CY5_A 2CY4_A 2GJY_A 1WVH_A.
Probab=98.47 E-value=4.1e-07 Score=74.54 Aligned_cols=76 Identities=24% Similarity=0.468 Sum_probs=64.6
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCc---ceEEEEeeCCcceeEeEEEeec-CchhhHHHHHHHHhhhH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR---DFAYVARDRSTRRHMCHVFRCD-MPARTIANTLRDICKKI 77 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~---~Fa~v~~d~~t~~~~CHVFrc~-~~a~~~a~Af~~~~~~~ 77 (242)
.+++..|+|.|..++..+-+||+..|.+|+...++.+ -|+|+++..+.+...+|+|.|+ +++.-++.++.+.-++.
T Consensus 45 kV~~~~v~L~D~~~k~~le~yPl~~I~~c~~~~~~~~~~~il~fV~r~~~~~~~~~H~Fqc~ev~a~~~~~~I~~~v~~~ 124 (131)
T PF08416_consen 45 KVSDQGVTLTDIETKEFLEHYPLSSIQFCGADPDSRRYNSILGFVVRKPGSSKPNVHLFQCEEVDAEQPAEDIVSAVSKV 124 (131)
T ss_dssp EEETTEEEEEESSTSSECEEEECCCEEEEEEETTTTEECBEEEEEEEETTCCCEEEEEEEETCTCTTSHHHHHHHHHHHH
T ss_pred EEeCCeEEEEECcccchhhhCCHhHeeeccccCCCCccceEEEEEEecCCCCCCcEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999998876 3999999998889999999995 46667777766554433
No 47
>PF14719 PID_2: Phosphotyrosine interaction domain (PTB/PID)
Probab=98.43 E-value=9.1e-07 Score=76.49 Aligned_cols=72 Identities=17% Similarity=0.328 Sum_probs=58.9
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC---CcceeEeEEEeecCchh----------hHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR---STRRHMCHVFRCDMPAR----------TIAN 68 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~---~t~~~~CHVFrc~~~a~----------~~a~ 68 (242)
.+...+|++.+.+ .-++-++|++|.+|+.+....+.|+||.|+- ....+.||+|-|+.+++ +|+.
T Consensus 44 ~V~~~Gik~~~~~--~~~~~y~i~RItYC~ad~~~PrVFawIyrhe~~~~~~~L~CHAvlC~k~~~Akama~~L~~af~~ 121 (182)
T PF14719_consen 44 TVSPSGIKMETKD--KGLTEYWIHRITYCTADPQHPRVFAWIYRHEGKKLKVELRCHAVLCSKEEKAKAMARALYQAFRS 121 (182)
T ss_pred EEcCCceEEEECC--CCceEEEeeeEEEecCCCCCCceEEEEEEcccCCCcccEEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 4667788999877 4478899999999999999999999999974 34689999999999866 6666
Q ss_pred HHHHHhh
Q psy3532 69 TLRDICK 75 (242)
Q Consensus 69 Af~~~~~ 75 (242)
||++.-+
T Consensus 122 Af~~~kr 128 (182)
T PF14719_consen 122 AFQEFKR 128 (182)
T ss_pred HHHHHHH
Confidence 6665533
No 48
>cd01213 tensin Tensin Phosphotyrosine-binding (PTB) domain. Tensin Phosphotyrosine-binding (PTB) domain. Tensin is a a focal adhesion protein, which contains a C-terminal SH2 domain followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.42 E-value=5.5e-07 Score=74.73 Aligned_cols=69 Identities=25% Similarity=0.430 Sum_probs=54.7
Q ss_pred cccCCceEEEcCCCCcee-eeEeeEEEEEEeeCCCC-----------CcceEEEEeeCCc-ceeEeEEEee---cCchhh
Q psy3532 2 DLDEGALKLTDPENLTVL-NTQPIHTIRVWGVGRDN-----------GRDFAYVARDRST-RRHMCHVFRC---DMPART 65 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l-~s~pI~~I~f~~~g~~~-----------~~~Fa~v~~d~~t-~~~~CHVFrc---~~~a~~ 65 (242)
-++.+.++|+|+.++... ..||+.+|+|||.+++| .+-|+||+|+..+ ..+.||||.- +-||.+
T Consensus 49 kVS~qGItLtDn~rk~ffrrhypl~~Vs~ca~dp~n~~~~~~~~~~~kriFgFVar~~~~~~~~~ChvF~e~~~~qpa~~ 128 (138)
T cd01213 49 KVSSQGITLTDNTRKKFFRRHYKVDSVIFCAIDPEERMWENEGAIAKARIFAFVARIPHSSTDNACHVFAELEPEQPASA 128 (138)
T ss_pred EEEcCCeeeeccccceeehhhCCcCeEEEEeeCCccccccccccccccEEEEEEEecCCCCCCeeEEEeccCCCCCCHHH
Confidence 357899999999877633 44999999999999987 4669999998766 7899999984 336667
Q ss_pred HHHHH
Q psy3532 66 IANTL 70 (242)
Q Consensus 66 ~a~Af 70 (242)
|.+-.
T Consensus 129 iv~~~ 133 (138)
T cd01213 129 IVNFA 133 (138)
T ss_pred HHHHH
Confidence 76643
No 49
>KOG1930|consensus
Probab=98.41 E-value=1.2e-06 Score=83.49 Aligned_cols=95 Identities=20% Similarity=0.312 Sum_probs=71.5
Q ss_pred EEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceee--eeEEEEEEEeeecCC-
Q psy3532 127 LRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLM--AECRVRFLSFLGIGH- 203 (242)
Q Consensus 127 f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l--~ec~vr~iSF~gvgk- 203 (242)
-+|.|||||.|+.-+|++.+..|+.......+...-.-|...||..||+++|.+-+ +. --..|-.|+|||.+-
T Consensus 347 CnVlyl~SVd~ESLTG~~av~kAt~~~~~~~p~p~~tvVHFKVSsQGITLTDNqRK----~FFRRHypv~sv~Fc~mDPq 422 (483)
T KOG1930|consen 347 CNVLYLGSVDVESLTGNEAVQKATSSQRAINPTPRATVVHFKVSSQGITLTDNQRK----VFFRRHYPVNSVIFCGMDPQ 422 (483)
T ss_pred ceEEEEeeeeccccccHHHHHHHHHHHhhcCCCCCceEEEEEEeccceeeeccchh----hheecccccceeEEecCChH
Confidence 58999999999999999888777766655444444566889999999999986543 11 112555799999731
Q ss_pred -----------CCceEEEEE-eC-CCCceEEEEEE
Q psy3532 204 -----------NVKQCAFIM-HT-AQDLFIAHVFV 225 (242)
Q Consensus 204 -----------d~k~FafI~-~~-~~~~f~CHVF~ 225 (242)
..|+|||++ .+ ...-=.||+|-
T Consensus 423 ~R~w~~~g~~~~s~iFgFVAr~~gS~teN~CHlFA 457 (483)
T KOG1930|consen 423 ERRWTNTGCGAQSKIFGFVARKPGSSTENVCHLFA 457 (483)
T ss_pred HhccccCCCCCcceEEEEEeccCCCCcccceeeee
Confidence 268999999 44 36777999995
No 50
>KOG3536|consensus
Probab=98.35 E-value=3.4e-08 Score=90.76 Aligned_cols=77 Identities=19% Similarity=0.289 Sum_probs=70.9
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh----hHHHHHHHHhhhHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR----TIANTLRDICKKIM 78 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~----~~a~Af~~~~~~~~ 78 (242)
++-.++.+.|+.|+.++|.+|+++|+||+++..+.|-|+||+|...+..|-||+|.|...+. .|+.||.-.+++.+
T Consensus 96 Isi~gviI~~~~T~~v~~~~~l~rIs~caddk~~kR~fsfIar~~es~~hlc~~f~s~Kla~~iTltigqaFdLay~~~~ 175 (321)
T KOG3536|consen 96 ISIQGVIIRDLGTMAVKHNFPLYRISYCADDKLAKRAFSFIARMTESQSHLCVAFDSLKLADDITLTIGQAFDLAYVKFL 175 (321)
T ss_pred eccceeEEeecccccceecCChhhhhHhHhHHHHHHHHHHHHHhcccCCceEEEeehhhhcchHHHHHHhhcchhhHHHH
Confidence 45678999999999999999999999999999999999999999999999999999998776 89999998888776
Q ss_pred H
Q psy3532 79 I 79 (242)
Q Consensus 79 ~ 79 (242)
+
T Consensus 176 ~ 176 (321)
T KOG3536|consen 176 D 176 (321)
T ss_pred h
Confidence 6
No 51
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=98.20 E-value=6.2e-05 Score=65.40 Aligned_cols=116 Identities=17% Similarity=0.314 Sum_probs=81.8
Q ss_pred CccceeEEEEeeeeeEecC-Cchh------hHHHHHHHHHHhcCCCCCce----eeEEEEcCCeEEEEecCCCcCceeee
Q psy3532 121 EEPKKILRAQYLGSIQVSK-PGGM------DILNNAIDTLVSTVPQHLWQ----DVNIAVAPSMITIHSTDEETGGTLMA 189 (242)
Q Consensus 121 ~e~~~~f~vkyLGsv~V~~-~~G~------dVln~Ai~~i~~~~~~~~w~----pv~l~Vs~~~i~i~~~~~~~~~e~l~ 189 (242)
.+..-.|+|||+|+++--+ +.+. ++| ++|+.-... ++=.|. .+.|.|+-.||+|++.+.. .+++
T Consensus 57 s~~~~ef~Vkyvg~i~~l~~~~~~~le~pl~lI-~~ID~aQq~-GkLP~v~~~eevil~VSKyGiKvt~~d~~---~VL~ 131 (200)
T PF10480_consen 57 SETCAEFRVKYVGAIESLQFSMSKSLEGPLELI-NYIDSAQQD-GKLPFVPSDEEVILSVSKYGIKVTDNDQR---DVLH 131 (200)
T ss_pred ccchhheeeeeeeehhhcccccccccccHHHHH-HHHHHHhhc-CcCCCCCCCCeEEEEEeeccEEEeecCCc---ceee
Confidence 4556779999999988765 3322 343 445543221 222332 4789999999999997765 8888
Q ss_pred eEEEEEEEee-----ecCCCCceEEEEE-eCCCCceEEEEEEcCCC--chHHHHHHHHHh
Q psy3532 190 ECRVRFLSFL-----GIGHNVKQCAFIM-HTAQDLFIAHVFVTEPS--SGALCKTIEAAC 241 (242)
Q Consensus 190 ec~vr~iSF~-----gvgkd~k~FafI~-~~~~~~f~CHVF~ce~~--A~~lseaV~aAc 241 (242)
-.+++.|-=| |.|+-..+||.=. ++.++.+.||||.|+.. |..||..++.|+
T Consensus 132 RhpL~~Ivr~V~YdDGlG~g~~llAlK~~~~~~e~y~l~v~Qcss~~qA~~ICk~l~~aF 191 (200)
T PF10480_consen 132 RHPLHEIVRMVCYDDGLGAGKNLLALKVGDERQEEYQLWVYQCSSDEQAQEICKVLGQAF 191 (200)
T ss_pred eeeeeeEEEEEEEecCcCCcceEEEEEccCCCcceEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 8888765533 2345667888877 66788999999999665 448999999886
No 52
>KOG3605|consensus
Probab=97.54 E-value=3.2e-05 Score=77.47 Aligned_cols=125 Identities=23% Similarity=0.320 Sum_probs=85.7
Q ss_pred CCCCCCCCccc----------eeEEEEeeeeeEecC------CchhhHHHHHHHHHHhc----------CCCC--Cceee
Q psy3532 114 QSFPTPMEEPK----------KILRAQYLGSIQVSK------PGGMDILNNAIDTLVST----------VPQH--LWQDV 165 (242)
Q Consensus 114 ~~fp~p~~e~~----------~~f~vkyLGsv~V~~------~~G~dVln~Ai~~i~~~----------~~~~--~w~pv 165 (242)
++||+..+.+. --|.+.||||++.-. ..=|---.+|+.+++.. ..++ ..+.|
T Consensus 429 as~p~~~~~pg~~epe~LidGvif~A~ylgsTqllse~~psk~~rm~Qaqeavsrvk~~~~~~~s~~~Apegesqp~tev 508 (829)
T KOG3605|consen 429 ASFPALVEVPGPCEPEDLIDGVIFGARYLGSTQLLSERNPSKAVRMMQAQEAVSRVKGGQKNAKSGKKAPEGESQPMTEV 508 (829)
T ss_pred ccccccccCCCCCCHHHhhhhheeecccccccccccCCCCcHHHHHHHHHHHHhhhccccccccccccCCCCCCCcceee
Confidence 56777665533 469999999999733 22344446788888611 1111 23458
Q ss_pred EEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec-CCCCceEEEEE-------------eC-----CCCceEEEEEEc
Q psy3532 166 NIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI-GHNVKQCAFIM-------------HT-----AQDLFIAHVFVT 226 (242)
Q Consensus 166 ~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv-gkd~k~FafI~-------------~~-----~~~~f~CHVF~c 226 (242)
.|.|+-.+|.|+..+.. +.+-...+|-|||.+. |-=.-..|=++ ++ .+-++.||||.+
T Consensus 509 dlfist~ri~VLnadlq---e~mmdhaLrtisyiadIg~lvvlMarrr~~~~s~~~~~~~~~~~~~~~rtpKMICHVFES 585 (829)
T KOG3605|consen 509 DLFISTQRIKVLNADLQ---ETMMDHALRTISYIADIGNVVVLMARRRDVRSSSEDCSEDIDPAQKGNRTPKMICHVFES 585 (829)
T ss_pred eeeeecceeEEEechhH---HhhhhhhhhhhHHHhhhhHHHHHHHHhhcccccccccCCCCCcccccCCCcceEEEEecc
Confidence 99999999999987765 7788888999999874 53221222211 11 135899999999
Q ss_pred CCCchHHHHHHHHHhC
Q psy3532 227 EPSSGALCKTIEAACK 242 (242)
Q Consensus 227 e~~A~~lseaV~aAc~ 242 (242)
|. |.=|+.+||.|++
T Consensus 586 de-AQfIAQSIGQAFq 600 (829)
T KOG3605|consen 586 DE-AQFIAQSIGQAFQ 600 (829)
T ss_pred ch-HHHHHHHHHHHHH
Confidence 97 8999999999873
No 53
>KOG3697|consensus
Probab=97.25 E-value=0.00019 Score=66.18 Aligned_cols=117 Identities=17% Similarity=0.289 Sum_probs=75.8
Q ss_pred cceeEEEEeeeeeEecCCch-------hhHHHHHHHHHHhcC--------CC--------------CCceeeEEEEcCCe
Q psy3532 123 PKKILRAQYLGSIQVSKPGG-------MDILNNAIDTLVSTV--------PQ--------------HLWQDVNIAVAPSM 173 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G-------~dVln~Ai~~i~~~~--------~~--------------~~w~pv~l~Vs~~~ 173 (242)
+.-.|.|.|||+|||-+.+- .++--+||.++-... .+ -+.-.+.|+|+.++
T Consensus 15 ~GVs~~v~YlGcVeV~~Sm~~ldf~trtq~~re~is~vceav~g~kgat~rR~~n~~~s~i~gr~~lq~a~m~I~itvst 94 (345)
T KOG3697|consen 15 PGVSYSVTYLGCVEVLESMNVLDFNTRTQMTREAISRVCEAVPGAKGATKRRPINPVLSSILGRSNLQFAGMSITLTIST 94 (345)
T ss_pred CCceEEEEEeeeehHHhhhhhhhhccHHHHHHHHHHHHHHhccccccccccCCCcccchhhcCccccccCCcceEEEeeh
Confidence 45679999999999977642 133344444432111 11 02222334444444
Q ss_pred EEE--EecCCCcCceeeeeEEEEEEEeeecCC-C-CceEEEEEeCCCCceEEEEEEc-CCCchHHHHHHHHHhC
Q psy3532 174 ITI--HSTDEETGGTLMAECRVRFLSFLGIGH-N-VKQCAFIMHTAQDLFIAHVFVT-EPSSGALCKTIEAACK 242 (242)
Q Consensus 174 i~i--~~~~~~~~~e~l~ec~vr~iSF~gvgk-d-~k~FafI~~~~~~~f~CHVF~c-e~~A~~lseaV~aAc~ 242 (242)
+.+ ...+.. +.+.+.....|||-.=|. | -.+.|||+.++.++=.||||.| +-.|..|--+|+.|++
T Consensus 95 ~sL~l~~~d~k---qiianh~m~~isfasGgD~Dt~~~~ayvaKD~~~rRac~Vlec~~g~a~DVI~Tigqaf~ 165 (345)
T KOG3697|consen 95 SSLNLMTADCK---QIIANHHMQSISFASGGDPDTADYVAYVAKDPVNRRACHILECCDGLAQDVIGTIGQAFE 165 (345)
T ss_pred hhhhhhhhHhh---hhhhhccccccccccCCCchhhhHHhhhccCccccceeEEEeccCchhHHHHHhhhhhhe
Confidence 443 333343 889999999999987654 3 5667788888888999999999 5566688888887763
No 54
>KOG4448|consensus
Probab=97.15 E-value=0.0027 Score=59.44 Aligned_cols=106 Identities=10% Similarity=0.091 Sum_probs=84.5
Q ss_pred EEEEeeeeeEecCCchhhHHHHHHHHHHhcC--CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC-
Q psy3532 127 LRAQYLGSIQVSKPGGMDILNNAIDTLVSTV--PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH- 203 (242)
Q Consensus 127 f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~--~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk- 203 (242)
|.|.|||++---.++|.-....++..|.... ...+-....|.|.++|+++.-.+ |.+..|-.++|+||-.++
T Consensus 63 y~V~ylgnalti~argegc~ek~ls~iw~~~t~~~r~~~~M~Lkv~asglk~~h~q-----e~l~ly~ahrityc~a~~~ 137 (374)
T KOG4448|consen 63 YVVFYLGNALTICARGEGCKEKTLSGIWHFYTMLKRKDNVMTLKVEASGLKAFHEQ-----EGLTLYWAHRITYCRAPSG 137 (374)
T ss_pred eEEEEecceeEEEecCCCcchhhhhhHHHHHHhhcccCceeEEEEecccceeeecc-----CcceeeeeeeeeeeecCCC
Confidence 9999999999999999998888988887432 22334567899999999998543 568999999999999977
Q ss_pred CCceEEEEE-eCCC---CceEEEEEEcCCCch--HHHHHH
Q psy3532 204 NVKQCAFIM-HTAQ---DLFIAHVFVTEPSSG--ALCKTI 237 (242)
Q Consensus 204 d~k~FafI~-~~~~---~~f~CHVF~ce~~A~--~lseaV 237 (242)
=+++|..|. |.|- .-..||+-+|-+... .++..+
T Consensus 138 ~pkvf~wiyrhegk~~~~~lrchaVL~sk~k~aqai~d~l 177 (374)
T KOG4448|consen 138 YPKVFCWIYRHEGKQLKSELRCHAVLCSKKKHAQAIEDVL 177 (374)
T ss_pred CCeEEEEEEecchhhhhhccceeeeeecchhhhhHHHHHH
Confidence 599999999 8873 467899999966554 444433
No 55
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. EPS8 is a regulator of Rac signaling. It consists of a PTB and an SH3 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=97.13 E-value=0.0048 Score=50.67 Aligned_cols=113 Identities=13% Similarity=0.194 Sum_probs=91.2
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHh-cCCCCCc-eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec--
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVS-TVPQHLW-QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI-- 201 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~-~~~~~~w-~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv-- 201 (242)
.|+|.-|=-..+.+-.|..-..+||+++.. -..+.-| ++..|.|.+.-+.+.|..+. +.|.+.++..|.-|-.
T Consensus 3 qy~veHL~Tf~l~~~~~~~~~~D~i~kL~~le~~G~iW~Q~m~lqv~~~~v~LlD~etk---~elE~fpl~~I~~~~a~~ 79 (127)
T cd01210 3 QYLVEHLATFTVGKQSGVVYPEDAMRKLLQMDKQGRVWSQKMILRVRYQWVTLLDYETK---EELESYPLSLIQEPTAFT 79 (127)
T ss_pred eeeeeeeEEEEEcCccCcCCHHHHHHHHHHHHhcCCccccceEEEEcCCeEEEEcCCCc---ChhhcCCHhhccccceec
Confidence 477888888888888899999999999952 2345668 57899999999999998876 7799999998877764
Q ss_pred --CCCCceEEEEE-eCCCCceEEEEEEc-CCCchHHHHHHHHHh
Q psy3532 202 --GHNVKQCAFIM-HTAQDLFIAHVFVT-EPSSGALCKTIEAAC 241 (242)
Q Consensus 202 --gkd~k~FafI~-~~~~~~f~CHVF~c-e~~A~~lseaV~aAc 241 (242)
+.=+-+..|++ .++.++=+=|.|.| +-.|..|.+.++.|-
T Consensus 80 ~~~~ynslL~~vvq~~~~~~~e~hlFQc~~v~A~~i~~DL~~a~ 123 (127)
T cd01210 80 SMELYNSILLFVVQEPGGSRTEMHIFQCQRVGAEHLVEDLQQAL 123 (127)
T ss_pred CCCCcCceEEEEEeCCCCCCCcEEEEEeccccHHHHHHHHHHHH
Confidence 33467889999 55688889999999 456778899888874
No 56
>KOG3535|consensus
Probab=96.86 E-value=0.006 Score=58.96 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=42.1
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR 47 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~ 47 (242)
++=|.++++|.+|+.++|..|+++|+|-|++-.|.|-|.|||..-
T Consensus 98 Is~~GIKI~DEKtGav~H~hpV~~ISfIArD~tD~RAFGyVcG~e 142 (557)
T KOG3535|consen 98 ISIDGIKILDEKTGAVLHNHPVSRISFIARDSTDARAFGYVCGEE 142 (557)
T ss_pred EeecceEEeeccccceeccCccceeeeeecccccccceeeeecCC
Confidence 456889999999999999999999999999999999999999864
No 57
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. EPS8 is a regulator of Rac signaling. It consists of a PTB and an SH3 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=96.08 E-value=0.011 Score=48.65 Aligned_cols=72 Identities=18% Similarity=0.247 Sum_probs=55.9
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCc---ceEEEEeeCCcceeEeEEEeecC-chhhHHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR---DFAYVARDRSTRRHMCHVFRCDM-PARTIANTLRD 72 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~---~Fa~v~~d~~t~~~~CHVFrc~~-~a~~~a~Af~~ 72 (242)
|.+.++-|+|+|++|+.+|.+||+..|.-+-.=.+.++ .-.|++.+.+.+.=.-|.|-|+. +|..+.+.++.
T Consensus 46 lqv~~~~v~LlD~etk~elE~fpl~~I~~~~a~~~~~~ynslL~~vvq~~~~~~~e~hlFQc~~v~A~~i~~DL~~ 121 (127)
T cd01210 46 LRVRYQWVTLLDYETKEELESYPLSLIQEPTAFTSMELYNSILLFVVQEPGGSRTEMHIFQCQRVGAEHLVEDLQQ 121 (127)
T ss_pred EEEcCCeEEEEcCCCcChhhcCCHhhccccceecCCCCcCceEEEEEeCCCCCCCcEEEEEeccccHHHHHHHHHH
Confidence 45778999999999999999999999987764444333 27788888877777789999986 55567666553
No 58
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=95.56 E-value=0.072 Score=46.62 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=52.8
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEE-EEeeCCCCC---cceEEEEeeCCcceeEeEEEeecCchh------hHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIR-VWGVGRDNG---RDFAYVARDRSTRRHMCHVFRCDMPAR------TIANTL 70 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~-f~~~g~~~~---~~Fa~v~~d~~t~~~~CHVFrc~~~a~------~~a~Af 70 (242)
|.++.-.|++.|.++..|++..|++.|- ...-+..-| ..||.=..+.+...++||||.|..++. .+.++|
T Consensus 112 l~VSKyGiKvt~~d~~~VL~RhpL~~Ivr~V~YdDGlG~g~~llAlK~~~~~~e~y~l~v~Qcss~~qA~~ICk~l~~aF 191 (200)
T PF10480_consen 112 LSVSKYGIKVTDNDQRDVLHRHPLHEIVRMVCYDDGLGAGKNLLALKVGDERQEEYQLWVYQCSSDEQAQEICKVLGQAF 191 (200)
T ss_pred EEEeeccEEEeecCCcceeeeeeeeeEEEEEEEecCcCCcceEEEEEccCCCcceEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6788899999999999999999999986 333322211 237777777777789999999987665 455555
Q ss_pred H
Q psy3532 71 R 71 (242)
Q Consensus 71 ~ 71 (242)
.
T Consensus 192 ~ 192 (200)
T PF10480_consen 192 D 192 (200)
T ss_pred H
Confidence 4
No 59
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=95.48 E-value=0.074 Score=44.86 Aligned_cols=60 Identities=22% Similarity=0.265 Sum_probs=42.4
Q ss_pred EcCCCCceeeeEeeEEEEEEee------C-----------------------CCCCcceEEEEeeC-CcceeEeEEEeec
Q psy3532 11 TDPENLTVLNTQPIHTIRVWGV------G-----------------------RDNGRDFAYVARDR-STRRHMCHVFRCD 60 (242)
Q Consensus 11 vD~~~~~~l~s~pI~~I~f~~~------g-----------------------~~~~~~Fa~v~~d~-~t~~~~CHVFrc~ 60 (242)
.+...+..-+-+||++|-+|+- + ....+.||-|.|.. .-+.+.||.|.|+
T Consensus 59 s~~~~~~E~~~fP~~~i~~~aAVkfVi~~~~~~~~~~~aFLPL~t~~~ni~~~~H~PiFA~vmR~t~~~kvLECHgFiCk 138 (158)
T cd01217 59 SALAEKNETLFFPIHNLHYCAAVRFVISDGFKVDDGGAAFLPLDSPFANIPIHVHPPIFAAIMRRTTGPKVLECHGFICK 138 (158)
T ss_pred ccccccccccccccceeeEeeEEEEEeccCcccCCCcccccccCCChhhCCCcCCCCeEEEEEecCCCCceEEeeEEEeC
Confidence 3444455668899999999996 3 22333499999864 4678999999999
Q ss_pred CchhhHHHHHHH
Q psy3532 61 MPARTIANTLRD 72 (242)
Q Consensus 61 ~~a~~~a~Af~~ 72 (242)
.+. -|+++.+
T Consensus 139 ~~i--AA~~~~~ 148 (158)
T cd01217 139 STI--AANALVR 148 (158)
T ss_pred CHH--HHHHHHH
Confidence 873 3455553
No 60
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=95.42 E-value=0.065 Score=38.03 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=46.9
Q ss_pred cccCCceEEEcCCCCceee--eEeeEEEEEEeeCCC-CCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLN--TQPIHTIRVWGVGRD-NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~--s~pI~~I~f~~~g~~-~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~ 71 (242)
.|.++.|.+.++....... ..++..|. +..+.+ ++..+.|.....+. -..+|+|.|+..+. .+.+||+
T Consensus 25 ~l~~~~l~~~~~~~~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~-~~~~~~~~~~~~~~~~~W~~al~ 97 (99)
T cd00900 25 FLFDDGLLLYKSDDKKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDR-GRRVFVFQADSEEEAQEWVEALQ 97 (99)
T ss_pred EEECCEEEEEEcCCCCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCC-CcEEEEEEcCCHHHHHHHHHHHh
Confidence 5678899999999887776 89999999 555544 23444444443321 45799999998643 6666665
No 61
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=95.40 E-value=0.14 Score=36.22 Aligned_cols=75 Identities=8% Similarity=0.112 Sum_probs=53.6
Q ss_pred CCCceeeEEEEcCCeEEEEecCCCcCceee--eeEEEEEEEeeecCC----CCceEEEEEeCCCCceEEEEEEcCCC--c
Q psy3532 159 QHLWQDVNIAVAPSMITIHSTDEETGGTLM--AECRVRFLSFLGIGH----NVKQCAFIMHTAQDLFIAHVFVTEPS--S 230 (242)
Q Consensus 159 ~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l--~ec~vr~iSF~gvgk----d~k~FafI~~~~~~~f~CHVF~ce~~--A 230 (242)
...|.+..+.+.+..|.+.+.+.+ ... ....+..++ +..+. ..+.|.++...+ ...+|+|.|+.. +
T Consensus 16 ~~~w~~~~~~l~~~~l~~~~~~~~---~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~--~~~~~~~~~~~~~~~ 89 (99)
T cd00900 16 GKRWKRRWFFLFDDGLLLYKSDDK---KEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDR--GRRVFVFQADSEEEA 89 (99)
T ss_pred ccCceeeEEEEECCEEEEEEcCCC---CcCCCCEEEccceE-EEECCCCCCCCceEEEECCCC--CcEEEEEEcCCHHHH
Confidence 568999999999999999887654 222 357777888 55533 367788777533 678999999884 5
Q ss_pred hHHHHHHHH
Q psy3532 231 GALCKTIEA 239 (242)
Q Consensus 231 ~~lseaV~a 239 (242)
...-+|++.
T Consensus 90 ~~W~~al~~ 98 (99)
T cd00900 90 QEWVEALQQ 98 (99)
T ss_pred HHHHHHHhc
Confidence 566666554
No 62
>KOG1930|consensus
Probab=93.80 E-value=0.055 Score=52.37 Aligned_cols=66 Identities=27% Similarity=0.491 Sum_probs=49.9
Q ss_pred ccCCceEEEcCCCCc-eeeeEeeEEEEEEeeCCCCCc-----------ceEEEEeeC-CcceeEeEEEeecCc---hhhH
Q psy3532 3 LDEGALKLTDPENLT-VLNTQPIHTIRVWGVGRDNGR-----------DFAYVARDR-STRRHMCHVFRCDMP---ARTI 66 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~-~l~s~pI~~I~f~~~g~~~~~-----------~Fa~v~~d~-~t~~~~CHVFrc~~~---a~~~ 66 (242)
++...+.|.|...+- ---.||+..|+|||-++.+.+ .|+||+|-. ++..=.||+|---.| |.+|
T Consensus 389 VSsQGITLTDNqRK~FFRRHypv~sv~Fc~mDPq~R~w~~~g~~~~s~iFgFVAr~~gS~teN~CHlFAEldp~QPasAI 468 (483)
T KOG1930|consen 389 VSSQGITLTDNQRKVFFRRHYPVNSVIFCGMDPQERRWTNTGCGAQSKIFGFVARKPGSSTENVCHLFAELDPEQPASAI 468 (483)
T ss_pred EeccceeeeccchhhheecccccceeEEecCChHHhccccCCCCCcceEEEEEeccCCCCcccceeeeeccCccCchHHH
Confidence 567788999987654 235799999999998876654 299999976 777889999976444 4455
Q ss_pred HH
Q psy3532 67 AN 68 (242)
Q Consensus 67 a~ 68 (242)
-+
T Consensus 469 Vn 470 (483)
T KOG1930|consen 469 VN 470 (483)
T ss_pred HH
Confidence 44
No 63
>KOG3775|consensus
Probab=93.19 E-value=0.25 Score=47.52 Aligned_cols=78 Identities=14% Similarity=0.294 Sum_probs=58.4
Q ss_pred cccCCceEEEcCCCCce------eeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecC--chh--hHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTV------LNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDM--PAR--TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~------l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~--~a~--~~a~Af~ 71 (242)
.++=-+|++.++..+.. -+=+...+|+|||-.+.|...|.||.++.-..++-||||.-.. +.- +..+||.
T Consensus 384 EislRgV~~s~k~~~~~~k~~~c~~f~~lknisfc~~hpr~n~~~gfitkhp~~~rfachVfks~es~rpvA~sVgRaF~ 463 (482)
T KOG3775|consen 384 EISLRGVKLSLKGGGPEFKFQRCSHFFQLKNISFCGCHPRNNCYFGFITKHPLLSRFACHVFKSQESTRPVAESVGRAFQ 463 (482)
T ss_pred hhhcceeEeecCCCCccccccccceeeEecccceeccccccceEEEeeccchhhhheeeeeeecccCChHHHHHHHHHHH
Confidence 34445677777665543 3556788999999999999999999999999999999997643 222 7778888
Q ss_pred HHhhhHHH
Q psy3532 72 DICKKIMI 79 (242)
Q Consensus 72 ~~~~~~~~ 79 (242)
++=.+.++
T Consensus 464 ~~yq~fl~ 471 (482)
T KOG3775|consen 464 EFYQEFLE 471 (482)
T ss_pred HHHHHHHH
Confidence 76554433
No 64
>KOG4458|consensus
Probab=91.60 E-value=0.11 Score=38.18 Aligned_cols=30 Identities=23% Similarity=0.482 Sum_probs=24.2
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHH
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLV 154 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~ 154 (242)
.-|++||.||+.|++|...--+-+||+++.
T Consensus 34 i~feakyvgsldiprp~srieivaamrrir 63 (78)
T KOG4458|consen 34 ICFEAKYVGSLDIPRPGSRIEIVAAMRRIR 63 (78)
T ss_pred ceEeeeeeeeecCCCCCCeeehhHhhhhhe
Confidence 569999999999999975443458898883
No 65
>KOG3557|consensus
Probab=91.30 E-value=0.24 Score=50.29 Aligned_cols=114 Identities=14% Similarity=0.195 Sum_probs=89.4
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC-CCCCc-eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec-
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV-PQHLW-QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI- 201 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~-~~~~w-~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv- 201 (242)
-.|++.-|--.-+.+..|+--..+||+++.... .+.-| +...+.|.+.-+.++|..+. +.|...++--|.||..
T Consensus 46 ~qyrveHL~Tf~~~ksd~i~~~eD~~rkL~~ld~~~~vWsQ~miLqv~d~~v~llD~Es~---~ele~fpl~~iq~~~a~ 122 (721)
T KOG3557|consen 46 SQYRVEHLATFILGKSDGITGPEDAIRKLLQLDAQGGVWSQDMILQVDDQWVLLLDIETK---EELESFPLSTIQRPQAV 122 (721)
T ss_pred ccccchhhhheecccccccccHHHHhHHHHhhccccccccccceeEeccCceeeechhhh---HHHhhcCcchhhhhhhh
Confidence 346666665556677888888999999998643 23457 46889999999999997776 7789999999999986
Q ss_pred ---CCCCceEEEEE-eCCCCceEEEEEEcC-CCchHHHHHHHHHh
Q psy3532 202 ---GHNVKQCAFIM-HTAQDLFIAHVFVTE-PSSGALCKTIEAAC 241 (242)
Q Consensus 202 ---gkd~k~FafI~-~~~~~~f~CHVF~ce-~~A~~lseaV~aAc 241 (242)
.+-.-+..+|+ .++..++.=|.|.|+ -+|.-|.|-|+.|-
T Consensus 123 ~~~~~y~siL~lv~qep~~~r~d~h~Fq~~ev~Aell~edi~~al 167 (721)
T KOG3557|consen 123 LNMCSYNSILSLVVQEPGRSRPDVHIFQCQEVGAELLREDIQGAL 167 (721)
T ss_pred cccccccchhheeeccCCCCCCceeEEeeccchhHHHHHhHHHHH
Confidence 33456678888 778999999999995 45667888888764
No 66
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain. These domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on a Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via `bridged' water molecules are coordinated by residues an Asn and a Ser residue []. The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6 [].; GO: 0005158 insulin receptor binding; PDB: 1XR0_B 1QQG_B 1IRS_A 2V76_D 1MK7_B 2K00_A 1MIZ_B 1MK9_B 1MIX_A 2H7E_A ....
Probab=90.19 E-value=1.7 Score=33.78 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=57.5
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
.+..|.|.+..|.+.+..+. +++.+.++++|-=+|. +...|-|-+ .+|...| .|.++. |.+|.++|+
T Consensus 22 g~~~L~l~~~~l~L~~~~~~---~~~~~Wpl~~lRryG~--~~~~F~fEaGRrc~tG~G~f---~f~t~~-a~~I~~~v~ 92 (100)
T PF02174_consen 22 GPYLLCLTPDELILIDPQSG---EPILEWPLRYLRRYGR--DDGIFSFEAGRRCPTGEGLF---WFQTPD-AEEIFETVE 92 (100)
T ss_dssp EEEEEEEESSEEEEEETTTT---EEEEEEEGGGEEEEEE--ETTEEEEEESTTSTTCSEEE---EEEEST-HHHHHHHHH
T ss_pred EEEEEEECCCEEEEecCCCC---ceEEEEEhHHhhhhcc--CCCEEEEEECCcCCCCCcEE---EEEeCC-HHHHHHHHH
Confidence 56789999999999877766 8899999888887766 788899999 3456666 677777 999999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 93 ~~i 95 (100)
T PF02174_consen 93 RAI 95 (100)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 67
>KOG3697|consensus
Probab=89.77 E-value=0.067 Score=49.68 Aligned_cols=67 Identities=25% Similarity=0.475 Sum_probs=54.9
Q ss_pred cCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcc-eEEEEeeCCcceeEeEEEeecCchh-----hHHHHHH
Q psy3532 4 DEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD-FAYVARDRSTRRHMCHVFRCDMPAR-----TIANTLR 71 (242)
Q Consensus 4 ~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~-Fa~v~~d~~t~~~~CHVFrc~~~a~-----~~a~Af~ 71 (242)
+.-.|.|..++.++++.++...+|+|-.-|..+.-+ .||++.|...++ -||||-|+.--+ +|.+||.
T Consensus 93 st~sL~l~~~d~kqiianh~m~~isfasGgD~Dt~~~~ayvaKD~~~rR-ac~Vlec~~g~a~DVI~Tigqaf~ 165 (345)
T KOG3697|consen 93 STSSLNLMTADCKQIIANHHMQSISFASGGDPDTADYVAYVAKDPVNRR-ACHILECCDGLAQDVIGTIGQAFE 165 (345)
T ss_pred ehhhhhhhhhHhhhhhhhccccccccccCCCchhhhHHhhhccCccccc-eeEEEeccCchhHHHHHhhhhhhe
Confidence 445677888899999999999999998888777776 899999976665 799999987444 7777775
No 68
>cd00824 PTBI IRS-like phosphotyrosine-binding domain. IRS-like phosphotyrosine-binding domain (PTBi); This domain has a PH-like fold and is found in insulin receptor substrate molecules and in other eukaryotic signaling molecules such as FRS2 and Dok. IRS and Dok molecules have an N-terminal PH domain, which is followed by an IRS-like PTB domain. FRS2 just has an N-terminal PTBi domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=81.63 E-value=6.7 Score=31.11 Aligned_cols=66 Identities=21% Similarity=0.305 Sum_probs=49.8
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC---CcceeEeEEEeecCchhhHHHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR---STRRHMCHVFRCDMPARTIANTLRDI 73 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~---~t~~~~CHVFrc~~~a~~~a~Af~~~ 73 (242)
|.+..+.|.|+|+.++.++..-|...||=||.+. .-|.|=+.-+ .-.+ ..|+|+ .+..|++.+|+.
T Consensus 25 L~lt~~~l~L~~~~~~~~~~~wpl~~lRRyG~~~---~~FsfEaGRrc~tG~G~---f~f~t~-~~~~I~~~v~~~ 93 (104)
T cd00824 25 LCLTSKELTLVKLGSRVALVVWPLMFLRRYGYDS---NLFSFEAGRRCVTGEGI---FTFQTD-RAEEIFQNVHET 93 (104)
T ss_pred EEECCCEEEEEecCCCceEEEeehHHeeecccCC---CEEEEEccCcCCCCCCE---EEEEcC-CHHHHHHHHHHH
Confidence 4577899999999999999999999999999864 3687765532 1223 457775 456788888865
No 69
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain. These domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on a Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via `bridged' water molecules are coordinated by residues an Asn and a Ser residue []. The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6 [].; GO: 0005158 insulin receptor binding; PDB: 1XR0_B 1QQG_B 1IRS_A 2V76_D 1MK7_B 2K00_A 1MIZ_B 1MK9_B 1MIX_A 2H7E_A ....
Probab=77.39 E-value=11 Score=29.12 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=48.2
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEee-CCcceeEeEEEeecCchhhHHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARD-RSTRRHMCHVFRCDMPARTIANTLRDI 73 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d-~~t~~~~CHVFrc~~~a~~~a~Af~~~ 73 (242)
.+.++.|.|.|+.++.++...|+..||=||.+ ..-|.|=+.- -.|..-. ..|.|+- +..|-+++++.
T Consensus 27 ~l~~~~l~L~~~~~~~~~~~Wpl~~lRryG~~---~~~F~fEaGRrc~tG~G~-f~f~t~~-a~~I~~~v~~~ 94 (100)
T PF02174_consen 27 CLTPDELILIDPQSGEPILEWPLRYLRRYGRD---DGIFSFEAGRRCPTGEGL-FWFQTPD-AEEIFETVERA 94 (100)
T ss_dssp EEESSEEEEEETTTTEEEEEEEGGGEEEEEEE---TTEEEEEESTTSTTCSEE-EEEEEST-HHHHHHHHHHH
T ss_pred EECCCEEEEecCCCCceEEEEEhHHhhhhccC---CCEEEEEECCcCCCCCcE-EEEEeCC-HHHHHHHHHHH
Confidence 46788999999999999999999999999984 3358776642 1222211 3788875 56676666644
No 70
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. This domain has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules The DOK family of eukaryotic signaling molecules have an N-terminal PH domain, followed by an IRS-like PTB domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=77.01 E-value=6.1 Score=31.51 Aligned_cols=64 Identities=17% Similarity=0.276 Sum_probs=48.1
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC---CcceeEeEEEeecCchhhHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR---STRRHMCHVFRCDMPARTIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~---~t~~~~CHVFrc~~~a~~~a~Af~ 71 (242)
|.+..+.|.|.|+.+++++..-|+..+|=+|.+ ...|+|-+.-+ ...+ ..|+|. .+..|-++++
T Consensus 25 L~v~~~~l~L~d~~~~~~l~~WP~~~LRryG~d---~~~FsFEAGRrC~tGeG~---f~F~t~-~~~~if~~v~ 91 (104)
T cd01203 25 LRMGPTELQLKSEDLGATLYMWPYRFLRKYGRD---KGKFSFEAGRRCTSGEGV---FTFDTT-QGNEIFRAVE 91 (104)
T ss_pred EEEcCCEEEEEcCCCCcEEEEeehHhhhhhccc---CCEEEEEecCcCCCCCcE---EEEecC-CHHHHHHHHH
Confidence 356788999999999999999999999999995 44799987743 2233 568886 4445555555
No 71
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. This domain has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules The DOK family of eukaryotic signaling molecules have an N-terminal PH domain, followed by an IRS-like PTB domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=72.65 E-value=19 Score=28.75 Aligned_cols=70 Identities=20% Similarity=0.339 Sum_probs=53.4
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
.+..|.|.+..|.+++.... +++...++++|-= +|+|...|.|-+ .+|...| .|.|. .+..|-++|+
T Consensus 21 G~y~L~v~~~~l~L~d~~~~---~~l~~WP~~~LRr--yG~d~~~FsFEAGRrC~tGeG~f---~F~t~-~~~~if~~v~ 91 (104)
T cd01203 21 GSYMLRMGPTELQLKSEDLG---ATLYMWPYRFLRK--YGRDKGKFSFEAGRRCTSGEGVF---TFDTT-QGNEIFRAVE 91 (104)
T ss_pred eeEEEEEcCCEEEEEcCCCC---cEEEEeehHhhhh--hcccCCEEEEEecCcCCCCCcEE---EEecC-CHHHHHHHHH
Confidence 46789999999999987654 7777777776653 366788999999 5566766 46665 5889999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 92 ~~i 94 (104)
T cd01203 92 AAI 94 (104)
T ss_pred HHH
Confidence 874
No 72
>KOG3557|consensus
Probab=67.12 E-value=2.8 Score=42.86 Aligned_cols=63 Identities=21% Similarity=0.267 Sum_probs=54.9
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcc---eEEEEeeCCcceeEeEEEeecCchh
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD---FAYVARDRSTRRHMCHVFRCDMPAR 64 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~---Fa~v~~d~~t~~~~CHVFrc~~~a~ 64 (242)
.+.++-|.|+|.+++..|.++|...|-+|..+-+..+- -++||.+..-.+.-=|.|.|+.-.+
T Consensus 91 qv~d~~v~llD~Es~~ele~fpl~~iq~~~a~~~~~~y~siL~lv~qep~~~r~d~h~Fq~~ev~A 156 (721)
T KOG3557|consen 91 QVDDQWVLLLDIETKEELESFPLSTIQRPQAVLNMCSYNSILSLVVQEPGRSRPDVHIFQCQEVGA 156 (721)
T ss_pred EeccCceeeechhhhHHHhhcCcchhhhhhhhcccccccchhheeeccCCCCCCceeEEeeccchh
Confidence 46789999999999999999999999999987775553 8899999888888889999987666
No 73
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like).
Probab=65.51 E-value=6.5 Score=30.92 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=35.4
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEee
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARD 46 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d 46 (242)
|.+..+.|.|+|+.++..+.+-|...||=||.+. .-|.|=+.-
T Consensus 24 L~lt~~~L~L~~~~~~~~~~~wpl~~lRRyG~~~---~~FsfEaGR 66 (98)
T smart00310 24 LRLTSETLVLWRLNPRVELVVWPLLSLRRYGRDK---NFFFFEAGR 66 (98)
T ss_pred EEECCcEEEEEecCCCccEEEeehhHeeeecCCC---CEEEEEccC
Confidence 4577899999999999999999999999999833 368776553
No 74
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like).
Probab=60.85 E-value=71 Score=25.07 Aligned_cols=70 Identities=10% Similarity=0.091 Sum_probs=52.8
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
....|.+.+..|.+.+.++. ..+.+.++.+|-=+|. |..+|-|=+ .+|...|. |.| ..|.+|-++|+
T Consensus 20 G~y~L~lt~~~L~L~~~~~~---~~~~~wpl~~lRRyG~--~~~~FsfEaGRrc~tG~G~f~---f~t-~~a~~i~~~v~ 90 (98)
T smart00310 20 GSYRLRLTSETLVLWRLNPR---VELVVWPLLSLRRYGR--DKNFFFFEAGRRCVSGPGEFT---FQT-VVAQEIFQLVL 90 (98)
T ss_pred eeEEEEECCcEEEEEecCCC---ccEEEeehhHeeeecC--CCCEEEEEccCcCCCCCCEEE---EEc-CcHHHHHHHHH
Confidence 46789999999999985544 5677778777776655 667899988 45667664 334 57899999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 91 ~a~ 93 (98)
T smart00310 91 EAM 93 (98)
T ss_pred HHH
Confidence 885
No 75
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=48.38 E-value=94 Score=21.85 Aligned_cols=68 Identities=9% Similarity=0.091 Sum_probs=47.6
Q ss_pred cccCCceEEEcCCC----CceeeeEeeEEEEEEeeCCCC-----CcceEEEEeeCCcceeEeEEEeecCchh--hHHHHH
Q psy3532 2 DLDEGALKLTDPEN----LTVLNTQPIHTIRVWGVGRDN-----GRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTL 70 (242)
Q Consensus 2 ~~~~~~l~lvD~~~----~~~l~s~pI~~I~f~~~g~~~-----~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af 70 (242)
+|.++.|.+.+..+ .......++..+.+......+ ...+.|.....+. ..+.|.|+..+. ..-.||
T Consensus 23 vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~---~~~~~~~~s~~~~~~W~~~i 99 (104)
T PF00169_consen 23 VLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNG---KSYLFSAESEEERKRWIQAI 99 (104)
T ss_dssp EEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTS---EEEEEEESSHHHHHHHHHHH
T ss_pred EEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCC---cEEEEEcCCHHHHHHHHHHH
Confidence 56778888888776 567888888888777766653 3456666665544 779999998766 555555
Q ss_pred HH
Q psy3532 71 RD 72 (242)
Q Consensus 71 ~~ 72 (242)
+.
T Consensus 100 ~~ 101 (104)
T PF00169_consen 100 QK 101 (104)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 76
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=47.06 E-value=32 Score=27.45 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=45.3
Q ss_pred cccCCceEEEc--CCC----CceeeeEeeE--EEEEEeeCCC----CCcceEEEEeeCCcceeEeEEEeecCchh--hHH
Q psy3532 2 DLDEGALKLTD--PEN----LTVLNTQPIH--TIRVWGVGRD----NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIA 67 (242)
Q Consensus 2 ~~~~~~l~lvD--~~~----~~~l~s~pI~--~I~f~~~g~~----~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a 67 (242)
.|.+..+.++| |.+ .+..+++|+. --++...|.. +++++.|..|-+.. ..=|+||.+++.. ...
T Consensus 25 aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg~~--vesh~fsVEt~~dL~~W~ 102 (108)
T cd01258 25 ALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTGTQ--VENHYLRVETHRDLASWE 102 (108)
T ss_pred EEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcCCc--eeeEEEEecCHHHHHHHH
Confidence 45667777777 332 2356788888 3344443332 35678888888643 7889999999766 777
Q ss_pred HHHH
Q psy3532 68 NTLR 71 (242)
Q Consensus 68 ~Af~ 71 (242)
+||.
T Consensus 103 raiv 106 (108)
T cd01258 103 RALV 106 (108)
T ss_pred HHHh
Confidence 7765
No 77
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=46.34 E-value=94 Score=21.25 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=42.7
Q ss_pred cccCCceEEEcCCC----CceeeeEeeEEEEEEeeCCCC--CcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHH
Q psy3532 2 DLDEGALKLTDPEN----LTVLNTQPIHTIRVWGVGRDN--GRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~----~~~l~s~pI~~I~f~~~g~~~--~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~ 71 (242)
+|.++.|.+.+... .......+|..+.+....... +..+.|.-..++. +-++|+|+..+. ....+|+
T Consensus 24 ~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~---~~~~f~~~s~~~~~~W~~~i~ 98 (102)
T smart00233 24 VLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADR---RSYLLQAESEEEREEWVDALR 98 (102)
T ss_pred EEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCC---ceEEEEcCCHHHHHHHHHHHH
Confidence 46677888888665 356778888888776655442 3455565555433 568899987654 4444444
No 78
>cd00824 PTBI IRS-like phosphotyrosine-binding domain. IRS-like phosphotyrosine-binding domain (PTBi); This domain has a PH-like fold and is found in insulin receptor substrate molecules and in other eukaryotic signaling molecules such as FRS2 and Dok. IRS and Dok molecules have an N-terminal PH domain, which is followed by an IRS-like PTB domain. FRS2 just has an N-terminal PTBi domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=35.99 E-value=2.2e+02 Score=22.50 Aligned_cols=70 Identities=13% Similarity=0.259 Sum_probs=50.4
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
.+..|.+.+..|.+++.... ..+...++.+|-=+|. |+.+|-|=+ .+|...|. |.|+ .+..|..+|+
T Consensus 21 G~y~L~lt~~~l~L~~~~~~---~~~~~wpl~~lRRyG~--~~~~FsfEaGRrc~tG~G~f~---f~t~-~~~~I~~~v~ 91 (104)
T cd00824 21 GSYRLCLTSKELTLVKLGSR---VALVVWPLMFLRRYGY--DSNLFSFEAGRRCVTGEGIFT---FQTD-RAEEIFQNVH 91 (104)
T ss_pred eeEEEEECCCEEEEEecCCC---ceEEEeehHHeeeccc--CCCEEEEEccCcCCCCCCEEE---EEcC-CHHHHHHHHH
Confidence 56789999999999987654 6677777777766554 457899988 45666653 5554 3667777777
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 92 ~~i 94 (104)
T cd00824 92 ETI 94 (104)
T ss_pred HHH
Confidence 663
No 79
>KOG0507|consensus
Probab=29.17 E-value=5.3 Score=41.72 Aligned_cols=99 Identities=17% Similarity=0.178 Sum_probs=68.1
Q ss_pred ceeEEE-EeeeeeEecCCchhhHHHHHHHHHHhcCCCC----Ccee-eEEEEcCCeEEEEecCCCcCceeeeeEEEEEEE
Q psy3532 124 KKILRA-QYLGSIQVSKPGGMDILNNAIDTLVSTVPQH----LWQD-VNIAVAPSMITIHSTDEETGGTLMAECRVRFLS 197 (242)
Q Consensus 124 ~~~f~v-kyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~----~w~p-v~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iS 197 (242)
...|.. -|+|+.....-.|++..+.|+.++-.+.... +..+ ..+++.=.|.+.++.... +.+.+..++++
T Consensus 506 ~~~~~d~ty~nsm~i~dlr~t~ltedaeaklg~n~~~slevrk~v~ti~~s~tYkGst~Ld~d~~---~~i~e~e~~ra- 581 (854)
T KOG0507|consen 506 SCQYPDKTYLNSMLIKDLRGTELTEDAEAKLGLNQSKSLEVRKKVPTIILSLTYKGSTFLDADNK---NRIAEHEIRRA- 581 (854)
T ss_pred hhccchhhhhcchhhhhcccccccchhhhhccccccchHHHHhhccchhhheeecCccccchhcc---cCCCCCCCCcc-
Confidence 355666 7999999999999999999999996443221 1111 123444445554443333 55666677776
Q ss_pred eeecCC--CCceEEEEE-eCCCCceEEEEEEc
Q psy3532 198 FLGIGH--NVKQCAFIM-HTAQDLFIAHVFVT 226 (242)
Q Consensus 198 F~gvgk--d~k~FafI~-~~~~~~f~CHVF~c 226 (242)
||.-++ |.-+|+||. +..+++..||+|--
T Consensus 582 ~casp~m~ds~~s~~~tk~l~~qh~yg~~~ed 613 (854)
T KOG0507|consen 582 SCASPDMEDSTTSAYITKDLANQHHYGHVFED 613 (854)
T ss_pred cccCCCchhhhHHHHHHHhhcccccccccccc
Confidence 466655 899999999 77899999999954
No 80
>cd01785 PDZ_GEF_RA Ubiquitin-like domain of PDZ_GEF_RA. PDZ_GEF_RA PDZ-GEF is a guanine nucleotide exchange factor (GEF) characterised by the presence of a PSD-95/DlgA/ZO-1 (PDZ) domain, a Ras-association (RA) domain and a region related to a cyclic nucleotide binding domain (RCBD). RA-GEF exchanges nucleotides of both Rap1 and Rap2, but is also thought to mediate cAMP-induced Ras activation. The RA domain interacts with Rap1 and also contributes to the membrane localization of RA-GEF. This domain may function in a positive feedback loop.
Probab=29.17 E-value=1.8e+02 Score=22.39 Aligned_cols=49 Identities=14% Similarity=0.275 Sum_probs=37.2
Q ss_pred EEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEe
Q psy3532 128 RAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178 (242)
Q Consensus 128 ~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~ 178 (242)
..||+ +.-.+.+-.+|+.-|++..--+...+.|.-.+++|.+.|+.=+.
T Consensus 13 t~kyi--li~K~Tta~evv~lal~eFgi~~~s~~~sLceVtV~~~g~IKQr 61 (85)
T cd01785 13 TCKYL--LIYKETTAHEVVMLALQEFGITAPSSNFSLCEVSVTPGGVIKQR 61 (85)
T ss_pred ceeEE--EEeccccHHHHHHHHHHHhCCCCCccceEEEEEEecCCceeeec
Confidence 35777 33344568899999999885555567899999999999986653
No 81
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=26.22 E-value=1.9e+02 Score=21.22 Aligned_cols=59 Identities=7% Similarity=0.066 Sum_probs=35.0
Q ss_pred cccCCceEEEcC-CCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh
Q psy3532 2 DLDEGALKLTDP-ENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR 64 (242)
Q Consensus 2 ~~~~~~l~lvD~-~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~ 64 (242)
+|.++.|..... .+.......+|....+.-. .+..+.|.|...+.+.+. +.|.++..+.
T Consensus 26 vL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~-~~~~k~~~F~I~~~~~~~---~~f~a~s~~e 85 (96)
T cd01260 26 VLKGTTLYWYRSKQDEKAEGLIFLSGFTIESA-KEVKKKYAFKVCHPVYKS---FYFAAETLDD 85 (96)
T ss_pred EEECCEEEEECCCCCCccceEEEccCCEEEEc-hhcCCceEEEECCCCCcE---EEEEeCCHHH
Confidence 567778888754 3354556666665444332 223356777776655455 4488887654
No 82
>PF15092 UPF0728: Uncharacterised protein family UPF0728
Probab=26.05 E-value=67 Score=24.92 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=17.5
Q ss_pred eeeeeEEEEEEEeeecCCCCc
Q psy3532 186 TLMAECRVRFLSFLGIGHNVK 206 (242)
Q Consensus 186 e~l~ec~vr~iSF~gvgkd~k 206 (242)
+.+..|.|.+|+|=|.|+.+.
T Consensus 59 e~VF~CnI~~L~FggDg~lDP 79 (88)
T PF15092_consen 59 EIVFQCNITDLEFGGDGKLDP 79 (88)
T ss_pred eEEEEeCCceeecCCCCCcCH
Confidence 778889999999977888443
No 83
>KOG4448|consensus
Probab=25.00 E-value=2.2e+02 Score=27.32 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=39.5
Q ss_pred eeeeEeeEEEEEEeeCCCCCcceEEEEeeCC---cceeEeEEEeecCchh
Q psy3532 18 VLNTQPIHTIRVWGVGRDNGRDFAYVARDRS---TRRHMCHVFRCDMPAR 64 (242)
Q Consensus 18 ~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~---t~~~~CHVFrc~~~a~ 64 (242)
-++-|-.++|-+|.-...-.+-|.+|-|+-. -..+.||...|..++.
T Consensus 120 ~l~ly~ahrityc~a~~~~pkvf~wiyrhegk~~~~~lrchaVL~sk~k~ 169 (374)
T KOG4448|consen 120 GLTLYWAHRITYCRAPSGYPKVFCWIYRHEGKQLKSELRCHAVLCSKKKH 169 (374)
T ss_pred cceeeeeeeeeeeecCCCCCeEEEEEEecchhhhhhccceeeeeecchhh
Confidence 3678899999999998888888999999732 3457899999988877
No 84
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=23.79 E-value=93 Score=18.90 Aligned_cols=20 Identities=20% Similarity=0.350 Sum_probs=14.8
Q ss_pred cCCceEEEcCCCCceeeeEe
Q psy3532 4 DEGALKLTDPENLTVLNTQP 23 (242)
Q Consensus 4 ~~~~l~lvD~~~~~~l~s~p 23 (242)
..+.|.++|+.+..++...+
T Consensus 12 ~~~~v~~id~~~~~~~~~i~ 31 (42)
T TIGR02276 12 GSNTVSVIDTATNKVIATIP 31 (42)
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 36788899998887666544
No 85
>COG5514 Uncharacterized conserved protein [Function unknown]
Probab=22.83 E-value=1.6e+02 Score=25.72 Aligned_cols=54 Identities=19% Similarity=0.299 Sum_probs=37.4
Q ss_pred eEEEcCCCCceeeeEeeEE-EEEEeeCCCCCcceEEEEeeCCc-------ceeEeEEEeecC
Q psy3532 8 LKLTDPENLTVLNTQPIHT-IRVWGVGRDNGRDFAYVARDRST-------RRHMCHVFRCDM 61 (242)
Q Consensus 8 l~lvD~~~~~~l~s~pI~~-I~f~~~g~~~~~~Fa~v~~d~~t-------~~~~CHVFrc~~ 61 (242)
--+.|++++.++.++-|-| +..-+-|+.+..-|.-++..++- .-++=|-|+||+
T Consensus 107 ywiwdkknn~i~~sfcIPRgvc~~AeG~a~~t~~~~t~t~G~iae~sfm~kn~kT~~fs~di 168 (203)
T COG5514 107 YWIWDKKNNLIMQSFCIPRGVCLLAEGWANDTKFSVTATRGDIAETSFMDKNFKTTSFSCDI 168 (203)
T ss_pred EEEEecCCCeEEEeeeccceEEEEeecccCCceeeeecccCCchhhhHHHhcCCcceEEEEE
Confidence 3578999999999999987 55667888886667666655431 123456666663
No 86
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=22.45 E-value=2.5e+02 Score=18.79 Aligned_cols=59 Identities=14% Similarity=0.114 Sum_probs=35.7
Q ss_pred cccCCceEEEcCCCC----ceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCch
Q psy3532 2 DLDEGALKLTDPENL----TVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPA 63 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~----~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a 63 (242)
+|.++.+.+.+.... ......+|....+.-.-...+..++|....... .-+.|+|+..+
T Consensus 22 ~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~---~~~~~~~~s~~ 84 (96)
T cd00821 22 VLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTPDG---RSYLLQAESEE 84 (96)
T ss_pred EEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecCCC---cEEEEEeCCHH
Confidence 456778888887653 566677777744444333322456666655443 56788888644
No 87
>PF09151 DUF1936: Domain of unknown function (DUF1936); InterPro: IPR015234 This domain is found in a set of hypothetical archaeal proteins. Its exact function has not, as yet, been defined. ; PDB: 2QH1_B 1PVM_B.
Probab=21.78 E-value=52 Score=20.92 Aligned_cols=11 Identities=55% Similarity=0.975 Sum_probs=7.6
Q ss_pred eEEEeecCchh
Q psy3532 54 CHVFRCDMPAR 64 (242)
Q Consensus 54 CHVFrc~~~a~ 64 (242)
..||||..||.
T Consensus 22 ikvfrcsnpac 32 (36)
T PF09151_consen 22 IKVFRCSNPAC 32 (36)
T ss_dssp EEEEEES-TT-
T ss_pred EEEEEcCCCcc
Confidence 57999998874
No 88
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=21.64 E-value=2.9e+02 Score=21.40 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=41.0
Q ss_pred CCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHH
Q psy3532 5 EGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDI 73 (242)
Q Consensus 5 ~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~ 73 (242)
..-|-.+||.++.+-...|+..+... +.-.+...| +|...+.+-.+ +.|+-+|....+++.++
T Consensus 25 ~PrL~yvdp~~~~~KgeIp~s~~~l~-v~~~~~~~F-~I~Tp~rty~l----eD~~~~a~~W~~~I~~~ 87 (89)
T cd01262 25 GPRLIYVDPVKKVVKGEIPWSDVELR-VEVKNSSHF-FVHTPNKVYSF----EDPKGRASQWKKAIEDL 87 (89)
T ss_pred CceEEEEcCCcCeEEeEecccccceE-EEEecCccE-EEECCCceEEE----ECCCCCHHHHHHHHHHH
Confidence 34577899999998888888874444 334444567 56555544433 56666777777766544
No 89
>cd01202 FRS2 Fibroblast growth factor receptor substrate 2 (FRS2/SNT1) Phosphotyrosine-binding domain. Fibroblast growth factor receptor substrate 2 (FRS2/SNT1) Phosphotyrosine-binding domain (IRS1-like). FRS2 mediates signaling downstream of the FGF receptor. It has an N-terminal PTBi domain, which has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=20.15 E-value=4.2e+02 Score=21.11 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=47.0
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
..-.|.|.+..|.+..++.+ - ...+++.|- .+|+|...|.|=+ .+|+..|. |.|. .|..|-.+|+
T Consensus 21 g~g~L~vt~~~L~l~~~~~~---~--~~WPl~~LR--RYG~d~~~FsFEAGRRC~tGeG~f~---F~t~-~~~~if~~v~ 89 (102)
T cd01202 21 GSGWLELTRTELTLYISGKE---P--VVWPLLCLR--RYGYNSDLFSFESGRRCQTGEGIFA---FRCK-RAEELFNLLQ 89 (102)
T ss_pred eeEEEEecceEEEEEcCCCC---E--EEccHHHhH--hhccCCCEEEEEccCcCCCCCCEEE---EEcC-CHHHHHHHHH
Confidence 34578899999999875543 2 333443332 2478889999998 55677764 6664 4889999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
++-
T Consensus 90 ~~I 92 (102)
T cd01202 90 SYI 92 (102)
T ss_pred HHH
Confidence 874
Done!