Query psy3532
Match_columns 242
No_of_seqs 178 out of 201
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 19:06:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dyq_A Amyloid beta A4 precurs 100.0 8.6E-51 3E-55 335.7 13.1 128 115-242 6-135 (144)
2 1wgu_A APBB2, amyloid beta (A4 100.0 5.6E-49 1.9E-53 322.4 15.6 128 113-242 4-131 (136)
3 3dxe_A Amyloid beta A4 protein 100.0 3E-49 1E-53 325.4 12.3 122 118-242 1-122 (140)
4 2yt0_A Amyloid beta A4 protein 100.0 2.6E-47 8.9E-52 324.2 13.6 127 113-241 50-176 (176)
5 2ysz_A Amyloid beta A4 precurs 100.0 7.5E-47 2.6E-51 323.6 14.4 128 113-242 4-131 (185)
6 3d8d_A Amyloid beta A4 precurs 100.0 2.8E-29 9.6E-34 207.5 7.5 81 1-81 59-141 (148)
7 3so6_A LDL receptor adaptor pr 100.0 3.8E-28 1.3E-32 195.6 12.7 115 125-242 4-124 (137)
8 2ej8_A DCC-interacting protein 99.9 5.7E-28 1.9E-32 201.5 11.6 117 123-242 14-140 (160)
9 3f0w_A NUMB-R, NUMB-like prote 99.9 1.6E-27 5.6E-32 200.0 14.5 115 123-242 40-157 (168)
10 2ela_A Adapter protein contain 99.9 1.1E-27 3.9E-32 202.9 11.6 117 123-242 27-153 (175)
11 3d8d_A Amyloid beta A4 precurs 99.9 2E-26 6.9E-31 190.4 12.8 116 124-242 2-135 (148)
12 4dbb_A Amyloid beta A4 precurs 99.9 1.3E-25 4.4E-30 187.8 11.8 113 124-242 8-130 (162)
13 1n3h_A SHC transforming protei 99.9 3E-25 1E-29 192.7 8.8 116 124-242 49-199 (207)
14 1aqc_A X11; PTB domain; 2.30A 99.9 6.5E-24 2.2E-28 179.2 11.4 112 125-242 8-158 (172)
15 1ntv_A Disabled homolog 1; bet 99.9 1.7E-23 6E-28 173.0 13.5 115 124-242 17-137 (152)
16 1p3r_A Disabled homolog 2; PTB 99.9 4.7E-23 1.6E-27 171.9 13.9 114 125-242 17-136 (160)
17 3suz_A Amyloid beta A4 precurs 99.8 9.3E-21 3.2E-25 177.0 12.9 112 125-242 9-160 (388)
18 1wvh_A Tensin, tensin1; beta s 99.8 1.4E-19 4.8E-24 147.5 13.7 111 126-238 3-130 (134)
19 3hqc_A Tensin-like C1 domain-c 99.8 1.3E-18 4.5E-23 145.0 12.6 112 125-239 14-142 (157)
20 2ej8_A DCC-interacting protein 99.6 4E-16 1.4E-20 129.8 7.0 74 2-75 62-144 (160)
21 2ela_A Adapter protein contain 99.6 9E-16 3.1E-20 129.8 6.7 73 1-73 74-155 (175)
22 3so6_A LDL receptor adaptor pr 99.6 2E-15 6.7E-20 121.1 7.4 70 2-71 49-124 (137)
23 3f0w_A NUMB-R, NUMB-like prote 99.5 3.5E-14 1.2E-18 118.8 9.8 71 1-71 82-157 (168)
24 2dyq_A Amyloid beta A4 precurs 99.4 2.9E-13 1E-17 111.5 6.9 72 2-75 59-135 (144)
25 1aqc_A X11; PTB domain; 2.30A 99.4 5.8E-13 2E-17 112.1 7.0 68 2-73 69-160 (172)
26 3dxe_A Amyloid beta A4 protein 99.4 9.6E-13 3.3E-17 107.9 7.8 72 2-75 51-122 (140)
27 1wgu_A APBB2, amyloid beta (A4 99.3 3.7E-12 1.3E-16 103.9 7.9 72 2-75 59-131 (136)
28 2ysz_A Amyloid beta A4 precurs 99.3 2.9E-12 1E-16 109.5 5.9 72 2-75 59-131 (185)
29 2yt0_A Amyloid beta A4 protein 99.3 3.7E-12 1.3E-16 108.0 6.2 71 2-74 105-176 (176)
30 4dbb_A Amyloid beta A4 precurs 99.3 6.2E-12 2.1E-16 104.8 6.7 66 2-71 58-130 (162)
31 1p3r_A Disabled homolog 2; PTB 99.2 5.8E-11 2E-15 98.6 7.9 70 2-73 65-138 (160)
32 1ntv_A Disabled homolog 1; bet 99.1 5.6E-11 1.9E-15 97.9 6.7 69 2-72 66-138 (152)
33 1n3h_A SHC transforming protei 99.1 3.7E-12 1.3E-16 110.3 -1.1 59 2-61 125-184 (207)
34 1wvh_A Tensin, tensin1; beta s 98.7 1.6E-08 5.3E-13 82.3 6.3 70 2-71 45-130 (134)
35 3suz_A Amyloid beta A4 precurs 98.6 5.3E-08 1.8E-12 90.6 7.5 74 2-79 71-168 (388)
36 4dx8_A Integrin beta-1-binding 98.6 8E-07 2.7E-11 73.4 11.9 115 123-241 13-145 (154)
37 3hqc_A Tensin-like C1 domain-c 98.4 5.8E-07 2E-11 74.8 6.5 70 2-71 57-141 (157)
38 2cy5_A Epidermal growth factor 97.9 0.00016 5.3E-09 59.1 11.6 114 125-241 9-130 (140)
39 2cy5_A Epidermal growth factor 97.3 0.00074 2.5E-08 55.1 7.8 71 1-71 53-127 (140)
40 4dx8_A Integrin beta-1-binding 97.1 0.0015 5E-08 53.9 7.6 71 1-71 66-146 (154)
41 4f7g_A Talin-1; alpha-helix bu 76.3 3.1 0.00011 34.8 4.9 72 3-82 149-221 (222)
42 4dxa_B KREV interaction trappe 65.5 14 0.00047 32.6 6.8 70 163-240 242-311 (322)
43 1j0w_A Downstream of tyrosine 63.9 19 0.00064 27.4 6.3 68 1-73 25-94 (103)
44 4dxa_B KREV interaction trappe 53.5 29 0.001 30.5 6.7 67 3-77 248-315 (322)
45 2v76_A Docking protein 1; alte 53.3 28 0.00096 26.5 5.7 67 1-72 27-98 (107)
46 1wgq_A FYVE, rhogef and PH dom 51.6 44 0.0015 23.7 6.4 68 2-72 30-100 (109)
47 1fao_A Dual adaptor of phospho 50.7 24 0.00082 25.8 4.9 68 2-73 40-110 (126)
48 1p5t_A DOK1, docking protein 1 49.1 44 0.0015 26.3 6.4 66 1-71 29-99 (127)
49 2v76_A Docking protein 1; alte 46.6 84 0.0029 23.8 7.5 72 164-241 24-100 (107)
50 1mix_A Talin; focal adhesion, 46.0 1.1E+02 0.0037 24.4 8.7 64 163-238 132-199 (206)
51 1p5t_A DOK1, docking protein 1 42.3 1.1E+02 0.0037 24.1 7.6 72 164-241 26-102 (127)
52 2d9y_A Pleckstrin homology dom 41.5 62 0.0021 22.9 5.9 68 2-72 34-106 (117)
53 1upq_A PEPP1; PH domain, phosp 41.2 37 0.0013 24.5 4.7 69 2-73 34-107 (123)
54 1u5d_A SKAP55, SRC kinase-asso 40.9 47 0.0016 23.0 5.0 68 2-72 29-102 (108)
55 4f7g_A Talin-1; alpha-helix bu 40.6 62 0.0021 26.6 6.4 65 163-239 143-211 (222)
56 2yry_A Pleckstrin homology dom 40.4 45 0.0015 23.9 5.0 68 2-72 45-117 (122)
57 3ml4_A Protein DOK-7; tyrosine 32.3 75 0.0026 27.4 5.7 70 2-76 136-206 (224)
58 2dkp_A Pleckstrin homology dom 31.2 83 0.0028 22.7 5.2 67 2-71 44-115 (128)
59 2dlw_A Docking protein 2, isof 30.6 35 0.0012 26.3 3.0 70 163-241 28-102 (113)
60 3ivf_A Talin-1; FERM domain, c 29.3 1.1E+02 0.0036 27.2 6.5 65 162-238 296-364 (371)
61 4a6h_A Phosphatidylinositol 4, 26.5 2E+02 0.0069 21.4 6.9 72 2-73 28-116 (120)
62 1mix_A Talin; focal adhesion, 24.2 59 0.002 26.0 3.5 58 3-68 138-196 (206)
63 1pls_A Pleckstrin homology dom 23.3 1.3E+02 0.0046 21.1 5.0 68 2-72 27-98 (113)
64 2i5f_A Pleckstrin; PH domain, 22.5 1.8E+02 0.0062 20.0 5.6 69 2-73 29-107 (109)
65 1j0w_A Downstream of tyrosine 21.6 2.6E+02 0.0088 20.9 8.6 70 163-240 21-94 (103)
66 1v89_A Hypothetical protein KI 21.5 2.1E+02 0.0072 19.9 6.2 71 2-72 30-109 (118)
No 1
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=100.00 E-value=8.6e-51 Score=335.74 Aligned_cols=128 Identities=28% Similarity=0.535 Sum_probs=111.8
Q ss_pred CCCCCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCC--CcCceeeeeEE
Q psy3532 115 SFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDE--ETGGTLMAECR 192 (242)
Q Consensus 115 ~fp~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~--~~~~e~l~ec~ 192 (242)
|||++..+++++|++||||++||++|+||||||+||++|++++++++|+||.|+|||++|+|++.+. ..+++++++||
T Consensus 6 ~~~~~~~~~~~~f~~kyLGsv~V~~~~G~dVln~Ai~~l~~~~~~~~w~~v~l~Vs~~~i~v~~~~~~~~~~~~~l~~c~ 85 (144)
T 2dyq_A 6 SGLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCP 85 (144)
T ss_dssp ---------CCCCEEEEEEEEEESSSCCHHHHHHHHHHHHCCCSSCCCEEEEEEECSSEEEEEECC------CCCSSEEE
T ss_pred hHHHHHHhhhhEEEEEEeccEEecCccCHHHHHHHHHHHHhcCCcccCcceEEEEeccceEEeccccccccccceeeece
Confidence 8899999999999999999999999999999999999999988889999999999999999998641 12248999999
Q ss_pred EEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 193 VRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 193 vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
||+|||||+|||+|+||||||+++++|+||||||||+|++||||||+|||
T Consensus 86 vr~ISFcgvgkd~r~FaFI~~~~~~~f~CHVF~ce~~A~~ls~aV~~Ac~ 135 (144)
T 2dyq_A 86 VRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEAVQAACM 135 (144)
T ss_dssp GGGEEEEEECSSTTEEEEEEECSSSCEEEEEEECSSCTHHHHHHHHHHHH
T ss_pred EEEEeeeecCCCCcEEEEEEeCCCCcEEEEEEecCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996
No 2
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=100.00 E-value=5.6e-49 Score=322.37 Aligned_cols=128 Identities=42% Similarity=0.747 Sum_probs=121.8
Q ss_pred CCCCCCCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEE
Q psy3532 113 PQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECR 192 (242)
Q Consensus 113 ~~~fp~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~ 192 (242)
.++||+|++|+.++|++||||+++|++|+||||+|+||++|+.+.++++|+||+|+|||+||+|++.+++ +++|++|+
T Consensus 4 ~~~~p~p~~e~~~~f~vkyLGsv~V~~p~G~dV~~~Ai~~i~~~~~~~~~~~v~l~Vs~~gi~v~~~~~~--~~~l~~~~ 81 (136)
T 1wgu_A 4 GSSGPTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNE--EEVLVECR 81 (136)
T ss_dssp CCCCCCSCCCCCCCEEEEEEEEEECSCSSCSHHHHHHHHHHHHSSCTTTSCEEEEEEETTEEEEECSSCS--SCEEEEEE
T ss_pred CCcCCCCCcCCceEEEEEecCcEEcCCCCcHHHHHHHHHHHHhccccccCceEEEEEccCEEEEEecCCC--Cceeccce
Confidence 3589999999999999999999999999999999999999999877889999999999999999998763 38899999
Q ss_pred EEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 193 VRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 193 vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
||+|||||+|+|+|+||||+++++++|+||||||+|+|++||+|||+||+
T Consensus 82 l~~ISFc~~d~~~k~FaFI~~~~~~~f~CHvF~c~~~A~~vs~aV~~A~~ 131 (136)
T 1wgu_A 82 VRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAACS 131 (136)
T ss_dssp TTTEEEEEECSSTTCEEEEEECSSSCEEEEEEECSSCTHHHHHHHHHHHC
T ss_pred EEEeeeEecCCCCcEEEEEEcCCCccEEEEEEEcCcchHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999996
No 3
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=100.00 E-value=3e-49 Score=325.43 Aligned_cols=122 Identities=37% Similarity=0.747 Sum_probs=109.6
Q ss_pred CCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEE
Q psy3532 118 TPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLS 197 (242)
Q Consensus 118 ~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iS 197 (242)
+|++||+++|+|||||||||++|+||||+|+||++|++++++++|+||.|+|||+||+|++.+++ ++|++|+||+||
T Consensus 1 ~~~~~~~~~F~vkYLGsv~V~~p~G~~Vl~~Ai~ki~~~~~~~~~~~v~l~Vs~~gi~v~~~~t~---e~l~~~~i~~IS 77 (140)
T 3dxe_A 1 APKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILHQQTE---AVLGECRVRFLS 77 (140)
T ss_dssp ---------CEEEEEEEEEESCSCCHHHHHHHHHHHHHTCCGGGCEEEEEEECSSEEEEEETTTC---CEEEEEEGGGEE
T ss_pred CCccchhheEeeeecceEEECCCCcHHHHHHHHHHHHhcCCcCCCceEEEEEcCCEEEEEecCCc---ceeeeccEEEEe
Confidence 58999999999999999999999999999999999999888889999999999999999998776 999999999999
Q ss_pred eeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 198 FLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 198 F~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
|||+|||+|+||||+++++++|+||||||+|+|++||+|||+||+
T Consensus 78 Fcg~~kd~k~FafI~~~~~~~f~CHvF~c~~~A~~vs~aV~~Af~ 122 (140)
T 3dxe_A 78 FLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAVQAACM 122 (140)
T ss_dssp EEEECSSTTEEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHHHH
T ss_pred eeccCCCCcEEEEEecCCCccEEEEEEecCcchHHHHHHHHHHHH
Confidence 999999999999999878999999999999999999999999995
No 4
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=100.00 E-value=2.6e-47 Score=324.23 Aligned_cols=127 Identities=43% Similarity=0.753 Sum_probs=121.5
Q ss_pred CCCCCCCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEE
Q psy3532 113 PQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECR 192 (242)
Q Consensus 113 ~~~fp~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~ 192 (242)
+++||+|++|+.++|+|||||+|+|++|+||||+|+||++|+.+.++.+|+||.|+|||+||+|++.+++ ++++++|+
T Consensus 50 ~~~~p~~~~e~~~~F~vkYLGsv~V~~p~G~dVl~~AI~kl~~~~~~~~~~~V~L~VS~~gI~v~d~~t~--~evl~~c~ 127 (176)
T 2yt0_A 50 GSSGPTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNE--EEVLVECR 127 (176)
T ss_dssp CCCCSCCCCSCCCEEEEEEEEEEECSCSSCHHHHHHHHHHHHHHSCTTTSCEEEEECGGGEEEEEESSCT--TCEEEEEE
T ss_pred cccCCccccccceEEEEEccCceEccCCccHHHHHHHHHHHHhccCcccCcceEEEEcCCEEEEEecCCC--cceecccc
Confidence 5699999999999999999999999999999999999999999887889999999999999999998763 38999999
Q ss_pred EEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHh
Q psy3532 193 VRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAAC 241 (242)
Q Consensus 193 vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc 241 (242)
||+|||||+|+|+|+||||++.++++|+||||||+|+|++||+|||+||
T Consensus 128 l~~ISFcgvd~d~k~FaFI~~~~~~~f~CHVF~cek~A~~ls~aI~aAc 176 (176)
T 2yt0_A 128 VRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAAC 176 (176)
T ss_dssp TTTCCEEEECSSTTEEEEEEEEETTEEEEEEEEESSCSHHHHHHHHHHC
T ss_pred eEEeeeEccCCCCcEEEEEEeCCCCCEEEEEEEccCChhHHHHHHHhhC
Confidence 9999999999999999999977799999999999999999999999999
No 5
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=100.00 E-value=7.5e-47 Score=323.63 Aligned_cols=128 Identities=42% Similarity=0.747 Sum_probs=122.0
Q ss_pred CCCCCCCCCccceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEE
Q psy3532 113 PQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECR 192 (242)
Q Consensus 113 ~~~fp~p~~e~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~ 192 (242)
.++||+|++|+.++|+|||||+|+|++|+||||+|+||++|+.+..+.+|+||.|+|||+||+|++.+++ +++|++|+
T Consensus 4 ~~~~p~p~~e~~~~F~vkYLGsv~V~~p~G~dV~~~Ai~kl~~~~~~~k~~~V~L~VS~~gI~v~d~~t~--~e~l~~~~ 81 (185)
T 2ysz_A 4 GSSGPTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNE--EEVLVECR 81 (185)
T ss_dssp CCCCCCCCCCCCEEEEEEEEEEEEESSSSCHHHHHHHHHHHHHHSCTTTSCEEEEEEETTEEEEEESSCS--SCEEEEEC
T ss_pred CCcCCCCCcCcceEEEEEecCcEEecCCCcHHHHHHHHHHHHhccccccCceEEEEEecCEEEEEecCCC--cceeeecc
Confidence 3589999999999999999999999999999999999999999888889999999999999999998763 38999999
Q ss_pred EEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 193 VRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 193 vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
||+|||||+|+|+|+||||+++++++|+||||||+|+|++||+|||+||+
T Consensus 82 I~~ISFc~vd~d~k~FaFI~~~~~~~f~CHVF~c~k~A~~vs~aV~~Af~ 131 (185)
T 2ysz_A 82 VRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAACS 131 (185)
T ss_dssp TTTCCEEECCSSTTEEEEEEESSSSCEEEEEEEESSCSTTHHHHHHHHHH
T ss_pred EEEeeeeccCCCCcEEEEEecCCCccEEEEEEEccCchHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999995
No 6
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=99.95 E-value=2.8e-29 Score=207.53 Aligned_cols=81 Identities=57% Similarity=1.073 Sum_probs=77.0
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCc--ceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhhhHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICKKIM 78 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~--~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~~~~ 78 (242)
|+|++|+|+|+||.|+++|++|||++|+|||+|+++++ +||||+||++|++|+||||||++||+.|++|+|++|++||
T Consensus 59 L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe~~a~~Ia~al~~~c~~~~ 138 (148)
T 3d8d_A 59 LQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCEAPAKNIATSLHEICSKIM 138 (148)
T ss_dssp EEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEESSCHHHHHHHHHHHHHHHH
T ss_pred EEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcCCchHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHH
Q psy3532 79 IER 81 (242)
Q Consensus 79 ~er 81 (242)
+|-
T Consensus 139 ~~~ 141 (148)
T 3d8d_A 139 AEL 141 (148)
T ss_dssp HTC
T ss_pred HHH
Confidence 974
No 7
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=99.95 E-value=3.8e-28 Score=195.57 Aligned_cols=115 Identities=22% Similarity=0.345 Sum_probs=104.2
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC--CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec-
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV--PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI- 201 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~--~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv- 201 (242)
..|.|+|||+++|+.++|++++++||++|.... .+.+|++|.|.||+.||++.+.+++ +++.+++|++||||+.
T Consensus 4 ~~f~v~YLGs~~v~~~~g~~~~~~Av~~l~~~~k~~~~~~~~v~L~Vs~~gi~l~d~~~~---~~~~~~~i~~Isf~~~d 80 (137)
T 3so6_A 4 MVFSLKYLGMTLVERPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTS---QLIENVSIYRISYCTAD 80 (137)
T ss_dssp EEEEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHTCSCCEEEEEEEETTEEEEEETTTC---CEEEEEEGGGEEEEEEC
T ss_pred cEEEEEEeeEEEecCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEEeCCeEEEEECCCC---cEEEeeccCEEEEEEec
Confidence 479999999999999999999999999998642 4457899999999999999998876 8899999999999999
Q ss_pred CCCCceEEEEE-eCCCCceEEEEEEcCC--CchHHHHHHHHHhC
Q psy3532 202 GHNVKQCAFIM-HTAQDLFIAHVFVTEP--SSGALCKTIEAACK 242 (242)
Q Consensus 202 gkd~k~FafI~-~~~~~~f~CHVF~ce~--~A~~lseaV~aAc~ 242 (242)
++|.++||||+ ++++++|.||||+|++ .|..|+.+|+.||+
T Consensus 81 ~~~~~~FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~l~~AF~ 124 (137)
T 3so6_A 81 KMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAFK 124 (137)
T ss_dssp SSSTTEEEEEEECSSSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 56999999999 5568999999999985 69999999999985
No 8
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=99.95 E-value=5.7e-28 Score=201.54 Aligned_cols=117 Identities=9% Similarity=0.236 Sum_probs=104.7
Q ss_pred cceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC---CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEee
Q psy3532 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV---PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFL 199 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~---~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~ 199 (242)
+.+.|.|+|||+++|+.++|++++++||++|...+ ...++++|.|.||+.||+|++.+++ +++++++|++||||
T Consensus 14 ~~~~f~vkYLGs~eV~~~~g~~~~~~Ai~~l~~~~~~~~~~~~~~v~L~VS~~gi~l~d~~tk---~~~~~~~i~~ISfc 90 (160)
T 2ej8_A 14 LHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQ---VTRLTFPLPCVVLY 90 (160)
T ss_dssp CEEEEEEEEEEEEEECCCSCTHHHHHHHHHHHHHHHHTTCCCCCEEEEEEESSEEEEECTTTC---CEEEEEEGGGEEEE
T ss_pred cccEEEEEeeeEEEeCCCCCHHHHHHHHHHHHHhhcccccCcCCEEEEEEECCeEEEEeCCCC---eEEEEeeCCeEEEE
Confidence 35789999999999999999999999999998543 2347899999999999999998887 88999999999999
Q ss_pred ecCC-CCceEEEEE-eC-----CCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 200 GIGH-NVKQCAFIM-HT-----AQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 200 gvgk-d~k~FafI~-~~-----~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+.++ |.++||||+ ++ +.++|.||||.|++.|..|+.||+.|++
T Consensus 91 a~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tigqAF~ 140 (160)
T 2ej8_A 91 ATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQ 140 (160)
T ss_dssp EEETTEEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EecCCCCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHHHHHHHH
Confidence 9955 799999999 65 3789999999999999999999999984
No 9
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=99.95 E-value=1.6e-27 Score=200.04 Aligned_cols=115 Identities=17% Similarity=0.269 Sum_probs=103.6
Q ss_pred cceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeec-
Q psy3532 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGI- 201 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv- 201 (242)
....|.|+|||+++|+.++|++++++||++|+.. +.+|++|.|.||+.||+|++.+++ +++.+++|++||||+.
T Consensus 40 g~~~f~vkYLGs~~V~~~~g~~~~~~Ai~~lk~~--~~k~~~V~L~VS~~GI~l~d~~t~---~~l~~~~i~~ISf~~~d 114 (168)
T 3f0w_A 40 GTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAM--GRKSVKSVLWVSADGLRVVDDKTK---DLLVDQTIEKVSFCAPD 114 (168)
T ss_dssp TCEEEEEEEEEEEEESCSCCHHHHHHHHHHHHTT--C--CEEEEEEECSSEEEEEETTTC---CEEEEEEGGGEEEEEEC
T ss_pred CceEEEEEEeeEEEECCCCCHHHHHHHHHHHHhc--CCCCcEEEEEEECCEEEEEeCCCC---eEEEeeecCcEEEEecC
Confidence 3458999999999999999999999999999763 457899999999999999998877 8899999999999999
Q ss_pred CCCCceEEEEE-eCCCCceEEEEEEcCCC-chHHHHHHHHHhC
Q psy3532 202 GHNVKQCAFIM-HTAQDLFIAHVFVTEPS-SGALCKTIEAACK 242 (242)
Q Consensus 202 gkd~k~FafI~-~~~~~~f~CHVF~ce~~-A~~lseaV~aAc~ 242 (242)
++|.++||||+ ++++++|.||||+|++. |..|+.||+.|++
T Consensus 115 ~~~~~~FafIar~~~~~~~~CHvF~c~~~~A~~I~~aIgqAF~ 157 (168)
T 3f0w_A 115 RNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCAFA 157 (168)
T ss_dssp SSCTTEEEEEEEETTTTEEEEEEEEESSSCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEecCCCCcEEEEEEEeccchHHHHHHHHHHHHH
Confidence 56999999999 77789999999999865 9999999999974
No 10
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=202.91 Aligned_cols=117 Identities=9% Similarity=0.236 Sum_probs=104.9
Q ss_pred cceeEEEEeeeeeEecCCchhhHHHHHHHHHHhcC---CCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEee
Q psy3532 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTV---PQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFL 199 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~---~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~ 199 (242)
+...|.|+|||+++|+.++|++++++||++|...+ ...++++|.|.||+.||+|++.+++ +++.+++|++||||
T Consensus 27 ~~~~f~vkYLGs~eV~~~~g~~v~~eAi~~l~~~~~~~~~~~~~~V~L~VS~~gI~l~d~~tk---~~i~~~~i~~ISfc 103 (175)
T 2ela_A 27 LHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQ---VTRLTFPLPCVVLY 103 (175)
T ss_dssp CCEEEEEEEEEEEEECSCCSTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSEEEEECTTTC---CEEEEEEGGGEEEE
T ss_pred ccceEEEEcceEEEecCCCCHHHHHHHHHHHHHhhcccccccCCEEEEEEECCeEEEEeCCCC---cEEEEeecCEEEEE
Confidence 46899999999999999999999999999997542 2347899999999999999999887 89999999999999
Q ss_pred ecCC-CCceEEEEE-eC-----CCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 200 GIGH-NVKQCAFIM-HT-----AQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 200 gvgk-d~k~FafI~-~~-----~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+.++ |.++||||+ ++ +.++|.||||.|++.|..|+.||+.|++
T Consensus 104 a~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tIgqAF~ 153 (175)
T 2ela_A 104 ATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQ 153 (175)
T ss_dssp EEETTEEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EeCCCCCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHHHHHHHH
Confidence 9955 799999999 65 3789999999999999999999999984
No 11
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=99.94 E-value=2e-26 Score=190.44 Aligned_cols=116 Identities=16% Similarity=0.338 Sum_probs=104.1
Q ss_pred ceeEEEEeeeeeEecCC-----chhhHHHHHHHHHHhcC------CCCCce---eeEEEEcCCeEEEEecCCCcCceeee
Q psy3532 124 KKILRAQYLGSIQVSKP-----GGMDILNNAIDTLVSTV------PQHLWQ---DVNIAVAPSMITIHSTDEETGGTLMA 189 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~-----~G~dVln~Ai~~i~~~~------~~~~w~---pv~l~Vs~~~i~i~~~~~~~~~e~l~ 189 (242)
.+.|.|+|||+++|.+. +|++++|+||++|...+ ....|. ...|.|++.+|++.|+.++ .+|+
T Consensus 2 ~~~F~Vr~LG~vEv~e~~~~p~r~s~~v~~~ir~L~~~~~~~~d~~~~~wg~gq~~~L~v~~~tlrLvD~~tk---~~L~ 78 (148)
T 3d8d_A 2 IKCFAVRSLGWVEMTEEELAPGRSSVAVNNCIRQLSYHKNNLHDPMSGGWGEGKDLLLQLEDETLKLVEPQSQ---ALLH 78 (148)
T ss_dssp CEEEEEEEEEEEECCGGGGSTTTHHHHHHHHHHHHTTCCCCCCCTTSTTCSTTCEEEEEEETTEEEEECTTTC---CEEE
T ss_pred ceeEEeeecccEEEecccCCccccHHHHHHHHHHHHhcccccccccccccccCceEEEEEcCCeEEEecCCCC---ceEE
Confidence 47899999999999999 99999999999997532 223565 5899999999999999887 8899
Q ss_pred eEEEEEEEeeecCCCC-c--eEEEEE-eCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 190 ECRVRFLSFLGIGHNV-K--QCAFIM-HTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 190 ec~vr~iSF~gvgkd~-k--~FafI~-~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+++|.+|+|||+|+++ + .||||+ +..+.+|.||||+|+..|..||+||+++|+
T Consensus 79 ~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe~~a~~Ia~al~~~c~ 135 (148)
T 3d8d_A 79 AQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCEAPAKNIATSLHEICS 135 (148)
T ss_dssp EEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcCCchHHHHHHHHHHHH
Confidence 9999999999999965 5 799999 878999999999999999999999999995
No 12
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=99.93 E-value=1.3e-25 Score=187.85 Aligned_cols=113 Identities=20% Similarity=0.279 Sum_probs=98.5
Q ss_pred ceeEEEEeeeeeEecCCc------hhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEE
Q psy3532 124 KKILRAQYLGSIQVSKPG------GMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLS 197 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~------G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iS 197 (242)
...|.|+|||+++|..++ ||++..+||++|....+..+|++|.|.||+.||+|.+.+++ +++.++++++||
T Consensus 8 Gv~F~vkYLGs~eV~s~r~~~~~~r~~~~~eAi~ri~~~~~~~~~~~V~L~IS~~gIkv~d~~t~---~~i~~~~l~~IS 84 (162)
T 4dbb_A 8 GIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKPEGESQPMTEVDLFISTQRIKVLNADTQ---EPMMDHPLRTIS 84 (162)
T ss_dssp EEEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHTCC-----CCCEEEEEEEESSEEEEEETTTC---CEEEEEEGGGEE
T ss_pred CcEEEeEEEeEEEEcCCCCCCcchhHHHHHHHHHHHHHhcCCCCCcEEEEEEECCEEEEEECCCC---cEEeeeecceeE
Confidence 478999999999999877 78899999999987655678999999999999999998887 999999999999
Q ss_pred eeecCCCCceEEEEE-eCC---CCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 198 FLGIGHNVKQCAFIM-HTA---QDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 198 F~gvgkd~k~FafI~-~~~---~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
||+.+ .++||||+ ++. .++|.||||+|++ |..|+.||+.|++
T Consensus 85 f~a~~--~~~f~fIar~~~~~~~~~~~CHVF~~~~-A~~I~~tigqAF~ 130 (162)
T 4dbb_A 85 YIADI--GNIVVLMARRRMPRSQYKMICHVFESED-AQLIAQSIGQAFS 130 (162)
T ss_dssp EEEEE--TTEEEEEEEECCSTTCEEEEEEEEECTT-HHHHHHHHHHHHH
T ss_pred EEEEC--CCEEEEEeccCCCCCCCcEEEEEEECCC-HHHHHHHHHHHHH
Confidence 99974 46999999 543 4799999999999 9999999999984
No 13
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=99.92 E-value=3e-25 Score=192.66 Aligned_cols=116 Identities=15% Similarity=0.241 Sum_probs=101.1
Q ss_pred ceeEEEEeeeeeEecCC-------chhhHHHHHHHHHHhcC--------CC-----------------CCceeeEEEEcC
Q psy3532 124 KKILRAQYLGSIQVSKP-------GGMDILNNAIDTLVSTV--------PQ-----------------HLWQDVNIAVAP 171 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~-------~G~dVln~Ai~~i~~~~--------~~-----------------~~w~pv~l~Vs~ 171 (242)
...|.|+|||+++|.++ +|++|+++||++|..+. .+ .++++|.|.||+
T Consensus 49 gv~f~vkYLGs~eV~~~~r~~~~~~g~~v~~eAi~rv~~~~~~~k~~~~~kk~~~k~~~~~~g~~~~~~~~~~V~L~IS~ 128 (207)
T 1n3h_A 49 GVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVST 128 (207)
T ss_dssp CEEEEEEEECEEECCCCSSCSSSCCHHHHHHHHHHHHHHHSTTSCSSCCSCCCCCCSSSSCCCEEECSSCSEEEEEEEET
T ss_pred CceEEEEecceEEeccccccCCccchHHHHHHHHHHHHHHhhcccchhhhcccccccchhccCCccccccCceEEEEEEC
Confidence 46899999999999999 99999999999998542 00 026799999999
Q ss_pred CeEEEEecCCCcCceeeeeEEEEEEEeeec-CC-CCceEEEEEeCCCCceEEEEEEcCC-CchHHHHHHHHHhC
Q psy3532 172 SMITIHSTDEETGGTLMAECRVRFLSFLGI-GH-NVKQCAFIMHTAQDLFIAHVFVTEP-SSGALCKTIEAACK 242 (242)
Q Consensus 172 ~~i~i~~~~~~~~~e~l~ec~vr~iSF~gv-gk-d~k~FafI~~~~~~~f~CHVF~ce~-~A~~lseaV~aAc~ 242 (242)
.||+|++.+++ +++.+++|++||||+. +. |.++||||+..+.++|.||||+|.+ .|.+|+.||+.||+
T Consensus 129 ~gIkv~d~~t~---~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~~~~~CHVF~cs~~~A~~I~~tIgqAF~ 199 (207)
T 1n3h_A 129 SSLNLMAADCK---QIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFE 199 (207)
T ss_dssp TEEEEEETTTT---SCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSSSCCEEEEEECSSSTHHHHHHCCCCCCC
T ss_pred CeEEEEeCCCC---ceeeeeccceEEEEeccCCCcCCEEEEEecCCCCCEEEEEEEcCHHHHHHHHHHHHHHHH
Confidence 99999998887 8999999999999994 33 6799999996666899999999866 58899999999985
No 14
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=99.90 E-value=6.5e-24 Score=179.17 Aligned_cols=112 Identities=20% Similarity=0.269 Sum_probs=93.7
Q ss_pred eeEEEEeeeeeEecCCchhh------HHHHHHHHHHhcC----------CC--CCceeeEEEEcCCeEEEEecCCCcCce
Q psy3532 125 KILRAQYLGSIQVSKPGGMD------ILNNAIDTLVSTV----------PQ--HLWQDVNIAVAPSMITIHSTDEETGGT 186 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~d------Vln~Ai~~i~~~~----------~~--~~w~pv~l~Vs~~~i~i~~~~~~~~~e 186 (242)
..|.|+|||+++|..++|.+ ++.+||.+|.... .+ .++++|.|.||..||+|++.+++ +
T Consensus 8 v~f~vkYLGs~eV~~~~g~~~~~R~~~~~eAi~rl~~~~~~~~~r~k~~~g~~~~~~~V~L~IS~~gikv~d~~t~---~ 84 (172)
T 1aqc_A 8 IIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAPEGESQPMTEVDLFILTQRIKVLNADTQ---E 84 (172)
T ss_dssp EEEEEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEEECSSEEEEEETTTC---C
T ss_pred ceEEEEeceEEEecCCCCCCcchhHHHHHHHHHHHHHHHHhhhccccccccccCCCcEEEEEEECCeEEEEeCCCC---c
Confidence 48999999999999999966 4899999996431 11 13678999999999999998887 9
Q ss_pred eeeeEEEEEEEeeecCCCCceEEEEE-eCC--------------------CCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 187 LMAECRVRFLSFLGIGHNVKQCAFIM-HTA--------------------QDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 187 ~l~ec~vr~iSF~gvgkd~k~FafI~-~~~--------------------~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
++++++|++||||+.. .++||||+ ++. .++|.||||.|++ |..|+.|||.|++
T Consensus 85 il~~~~l~~ISf~aD~--~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF~s~~-A~~I~~tIGqAF~ 158 (172)
T 1aqc_A 85 TMMDHPLRTISYIADI--GNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVFESED-AQLIAQSIGQAFS 158 (172)
T ss_dssp EEEEEEGGGEEEEEEE--TTEEEEEECCC----------------------CEEEEEEEECTT-HHHHHHHHHHHHH
T ss_pred eEeccccceEEEEeeC--CcEEEEEecCCCccccccccccccccccccCCCCcEEEEEEECcc-HHHHHHHHHHHHH
Confidence 9999999999999853 46899999 432 2599999999999 9999999999984
No 15
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=99.90 E-value=1.7e-23 Score=173.02 Aligned_cols=115 Identities=11% Similarity=0.110 Sum_probs=102.0
Q ss_pred ceeEEEEeeeeeEecCCchhhHHHHHHHHHHhc-----CCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEe
Q psy3532 124 KKILRAQYLGSIQVSKPGGMDILNNAIDTLVST-----VPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSF 198 (242)
Q Consensus 124 ~~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~-----~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF 198 (242)
...|.|+|||+++|..++|++++.+||++|... ..+.+.++|.|.||..||+|.+.+++ +++.+++|++|||
T Consensus 17 gv~f~vkYLGs~eV~~~~g~~v~~eA~~~i~~~~~~~k~~~~~~~~v~L~IS~~GI~v~d~~tk---~~~~~~~l~~ISf 93 (152)
T 1ntv_A 17 GVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFDEKTG---ALQHHHAVHEISY 93 (152)
T ss_dssp CEEEEEEEEEEEECSSSCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEEETTEEEEEETTTC---CEEEEECGGGEEE
T ss_pred CcEEEEEeCCeEEecCCCCchHHHHHHHHHHHHHhhhhccCCCCCEEEEEEECCeEEEEECCCC---ceEeeeecCcEEE
Confidence 357999999999999999999999999999864 24567799999999999999998887 8999999999999
Q ss_pred eec-CCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 199 LGI-GHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 199 ~gv-gkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
|+. +.|.++||||+..+. .+.||+|-++..|..|+.||+.|++
T Consensus 94 ~a~d~~d~r~FafI~k~~~-~h~f~v~~s~~~A~~I~~tigqAF~ 137 (152)
T 1ntv_A 94 IAKDITDHRAFGYVCGKEG-NHRFVAIKTAQAAEPVILDLRDLFQ 137 (152)
T ss_dssp EEECTTCTTEEEEEESSTT-CCEEEEEEESSCSHHHHHHHHHHHH
T ss_pred EeCCCCCCcEEEEEEEcCC-eEEEEEEccHHHHHHHHHHHHHHHH
Confidence 999 558999999994332 4789999998899999999999974
No 16
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=99.90 E-value=4.7e-23 Score=171.89 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=102.0
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhc-----CCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEee
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVST-----VPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFL 199 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~-----~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~ 199 (242)
..|.|+|||+++|..++|++++.+||++|... ..+.+.++|.|.||..||+|++.+++ +++.+++|++||||
T Consensus 17 v~f~vkYLGs~~V~~~~g~~~~~eA~~~i~~~~~~~k~~~~~~~~V~L~IS~~GI~v~d~~tk---~~~~~~~l~~ISfc 93 (160)
T 1p3r_A 17 VKYKAKLIGIDDVPDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKTG---VIEHEHPVNKISFI 93 (160)
T ss_dssp EEEEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEEETTEEEEEETTTC---CEEEEECGGGEEEE
T ss_pred eEEEEEeceeEEecCCCChHHHHHHHHHHHHHHhhhhccCCCCCEEEEEEECCeEEEEECCCC---eEEEecccCeEEEE
Confidence 67999999999999999999999999999854 23456789999999999999998887 89999999999999
Q ss_pred ec-CCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHHhC
Q psy3532 200 GI-GHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 200 gv-gkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+. +.|.++||||+... ..+.||+|-++..|..|+.||+.|++
T Consensus 94 a~d~~d~r~FafI~k~~-~~h~c~vf~s~~~A~~I~~tigqAF~ 136 (160)
T 1p3r_A 94 ARDVTDNRAFGYVCGGE-GQHQFFAIKTGQQAEPLVVDLKDLFQ 136 (160)
T ss_dssp EECTTCTTEEEEEESST-TCEEEEEEEESSCSHHHHHHHHHHHH
T ss_pred ecCCCCCcEEEEEEecC-CEEEEEEEccHHHHHHHHHHHHHHHH
Confidence 99 55999999999433 58889999999999999999999974
No 17
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.84 E-value=9.3e-21 Score=176.99 Aligned_cols=112 Identities=19% Similarity=0.273 Sum_probs=96.8
Q ss_pred eeEEEEeeeeeEecCCc------hhhHHHHHHHHHHhc-------------CCCCCceeeEEEEcCCeEEEEecCCCcCc
Q psy3532 125 KILRAQYLGSIQVSKPG------GMDILNNAIDTLVST-------------VPQHLWQDVNIAVAPSMITIHSTDEETGG 185 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~------G~dVln~Ai~~i~~~-------------~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~ 185 (242)
-.|.|||||++||..++ +|+|.++||+++... .....|++|.|+||+.+|+|++.++.
T Consensus 9 v~f~~kylG~~~v~s~~~~~~~~r~~~~~eai~rv~~~~k~~~~~~~~~~~~~~~~~~~v~l~IS~~gi~v~~~~t~--- 85 (388)
T 3suz_A 9 IIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTLTEVDLFISTQRIKVLNADTQ--- 85 (388)
T ss_dssp EEEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCSSEEEEEEECSSEEEEEETTTC---
T ss_pred cEEeeeEeeeeeccCCCCCCccchHHHHHHHHHHHHHHHhhccccccCCCcccccccceEEEEEEeceEEEEecCCc---
Confidence 46999999999997776 588999999999872 23357899999999999999998877
Q ss_pred eeeeeEEEEEEEeeecCCCCceEEEEE-eCCCCceE--------------------EEEEEcCCCchHHHHHHHHHhC
Q psy3532 186 TLMAECRVRFLSFLGIGHNVKQCAFIM-HTAQDLFI--------------------AHVFVTEPSSGALCKTIEAACK 242 (242)
Q Consensus 186 e~l~ec~vr~iSF~gvgkd~k~FafI~-~~~~~~f~--------------------CHVF~ce~~A~~lseaV~aAc~ 242 (242)
+++.++++++||||. .+.++|+||+ +...+++. ||||+|++ |..|+.||+.|++
T Consensus 86 ~~~~~~~l~~IS~~~--d~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ChvF~s~~-a~~i~~ti~qaf~ 160 (388)
T 3suz_A 86 ETMMDHALRTISYIA--DIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFESED-AQLIAQSIGQAFS 160 (388)
T ss_dssp CEEEEEEGGGEEEEE--ECSSEEEEEEEECCCCCC-------------CCCCEEEEEEEEECTT-HHHHHHHHHHHHH
T ss_pred ChhhhccccceeEEe--ecCceEEEEEecCCCccccccccccCccccccccccceEEEEecccC-HHHHHHHHHHHHH
Confidence 999999999999993 4678999999 66666655 99999999 9999999999974
No 18
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=99.82 E-value=1.4e-19 Score=147.53 Aligned_cols=111 Identities=13% Similarity=0.233 Sum_probs=90.2
Q ss_pred eEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCC-C
Q psy3532 126 ILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGH-N 204 (242)
Q Consensus 126 ~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgk-d 204 (242)
-++|+||||++|+..+|++++.+||++++......+.++|.+.||.+||+++|.+.. .---..+++.+|||||.+. |
T Consensus 3 acnV~yLgSvevesltG~~av~~Ai~~~l~~~~~~~~t~vh~kVS~qGItLtD~~rk--~ffRrhypl~~VsfCa~dP~~ 80 (134)
T 1wvh_A 3 ACNVLFINSVEMESLTGPQAISKAVAETLVADPTPTATIVHFKVSAQGITLTDNQRK--LFFRRHYPLNTVTFCDLDPQE 80 (134)
T ss_dssp EEEEEEEEEEEEETCCHHHHHHHHHHHHHTCSSCCCCEEEEEEEETTEEEEEESSSC--SSCEEEEEGGGEEEEEECTTC
T ss_pred ceEEEEEEEEEecCCcCHHHHHHHHHHHHhcCCCCCCeEEEEEEEcCCCeEEccCcc--eEEEEecccCcEEEecCCccc
Confidence 378999999999999999999999999998777677789999999999999998764 1123567889999999955 3
Q ss_pred -----------CceEEEEE-eCC-CCceEEEEEE---cCCCchHHHHHHH
Q psy3532 205 -----------VKQCAFIM-HTA-QDLFIAHVFV---TEPSSGALCKTIE 238 (242)
Q Consensus 205 -----------~k~FafI~-~~~-~~~f~CHVF~---ce~~A~~lseaV~ 238 (242)
.|+||||+ +++ ...+.||||. .+..|.+|...|.
T Consensus 81 r~w~~~~~~~~~riFGFVar~~~~~~~n~CHvF~e~d~~qpa~~Iv~~v~ 130 (134)
T 1wvh_A 81 RKWTKTDGSGPAKLFGFVARKQGSTTDNVCHLFAELDPDQPAAAIVNFVS 130 (134)
T ss_dssp CEEECSSSSCEEEEEEEEECC-CCTTCEEEEEEEECCTTSCHHHHHHHHH
T ss_pred ccccccccCCCceEEEEEEccCCCCCCeeEEEecccCCCCCHHHHHHHHH
Confidence 58999999 665 6889999995 4444555555543
No 19
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=99.78 E-value=1.3e-18 Score=145.04 Aligned_cols=112 Identities=18% Similarity=0.251 Sum_probs=89.5
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhcCCCCCceeeEEEEcCCeEEEEecCCCcCceee-eeEEEEEEEeeecCC
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEETGGTLM-AECRVRFLSFLGIGH 203 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~~~~~~w~pv~l~Vs~~~i~i~~~~~~~~~e~l-~ec~vr~iSF~gvgk 203 (242)
..|+|+||||++|+.++|.+++..||++++....+.+.++|.+.||+.||+++|...+ ..+ ..+++.+|||||++.
T Consensus 14 aacnv~yLgSvevesltG~~av~kAv~~~l~~~~~~~~t~V~fkVS~qGItLtD~~rK---~FfrrHypl~~IsFC~~DP 90 (157)
T 3hqc_A 14 AACSVLYLTSVETESLTGPQAVARASSAALSCSPRPTPAVVHFKVSAQGITLTDNQRK---LFFRRHYPVNSITFSSTDP 90 (157)
T ss_dssp EEEEEEEEEEEECTTCCHHHHHHHHHHHHHHCC---CCEEEEEEEETTEEEEEEEETT---EEEEEEEEGGGEEEEEECT
T ss_pred CeeeEEEeceEecCCCCChHHHHHHHHHHHhcCCCCCCeEEEEEEeCCCceEEecccc---eeehhcCcccceEeecCCh
Confidence 4599999999999999999999999999998777777889999999999999997654 222 347888999999955
Q ss_pred -C----------CceEEEEE-eCC-CCceEEEEEEc---CCCchHHHHHHHH
Q psy3532 204 -N----------VKQCAFIM-HTA-QDLFIAHVFVT---EPSSGALCKTIEA 239 (242)
Q Consensus 204 -d----------~k~FafI~-~~~-~~~f~CHVF~c---e~~A~~lseaV~a 239 (242)
| .|+||||+ +++ ...+.||||.- +-.|.+|-.-|..
T Consensus 91 ~~r~w~~~~~~~~riFGFVARk~~s~~~n~CHlFae~dp~QPAsaIvnfv~k 142 (157)
T 3hqc_A 91 QDRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPDQPAGAIVTFITK 142 (157)
T ss_dssp TCCEEECTTSCEEEEEEEEEEETTEEEEEEEEEEECCBTTBCHHHHHHHHHH
T ss_pred hhccccccCCCcccEEEEEEccCCCCCCeeEEEeeccCCCCCHHHHHHHHHH
Confidence 3 48999999 777 46999999964 4456666655543
No 20
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=99.62 E-value=4e-16 Score=129.79 Aligned_cols=74 Identities=20% Similarity=0.335 Sum_probs=64.6
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-----CcceeEeEEEeecCchh----hHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-----STRRHMCHVFRCDMPAR----TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-----~t~~~~CHVFrc~~~a~----~~a~Af~~ 72 (242)
.++.++|+|+|+.++.+++.+||++|+||+.|+++.+.|+||++|. .+..|+||||.|+..|. +|+.||+.
T Consensus 62 ~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tigqAF~~ 141 (160)
T 2ej8_A 62 LVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQI 141 (160)
T ss_dssp EEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred EEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999997 37899999999998777 77777774
Q ss_pred Hhh
Q psy3532 73 ICK 75 (242)
Q Consensus 73 ~~~ 75 (242)
.-+
T Consensus 142 ay~ 144 (160)
T 2ej8_A 142 ALH 144 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 21
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=99.60 E-value=9e-16 Score=129.77 Aligned_cols=73 Identities=21% Similarity=0.356 Sum_probs=64.1
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-----CcceeEeEEEeecCchh----hHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-----STRRHMCHVFRCDMPAR----TIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-----~t~~~~CHVFrc~~~a~----~~a~Af~ 71 (242)
|.++.++|+|+|+.++.+++.+||.+|+||+.|++|.+.|+||++|. .+..|+||||.|+..|. +|+.||+
T Consensus 74 L~VS~~gI~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tIgqAF~ 153 (175)
T 2ela_A 74 LLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQ 153 (175)
T ss_dssp EEECSSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHHHHHHHH
T ss_pred EEEECCeEEEEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999997 37899999999998777 6677776
Q ss_pred HH
Q psy3532 72 DI 73 (242)
Q Consensus 72 ~~ 73 (242)
..
T Consensus 154 ~a 155 (175)
T 2ela_A 154 IA 155 (175)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 22
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=99.58 E-value=2e-15 Score=121.05 Aligned_cols=70 Identities=21% Similarity=0.419 Sum_probs=62.7
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCch--h----hHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPA--R----TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a--~----~~a~Af~ 71 (242)
.++.++|+|+|++++.+++.+||.+|+||+.|+.+.+.||||++|..+..++||||+|+.++ . ++..||+
T Consensus 49 ~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~l~~AF~ 124 (137)
T 3so6_A 49 KVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAFK 124 (137)
T ss_dssp EEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECSSSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999763 3 5556655
No 23
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=99.52 E-value=3.5e-14 Score=118.79 Aligned_cols=71 Identities=23% Similarity=0.450 Sum_probs=63.8
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCc-hh----hHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP-AR----TIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~-a~----~~a~Af~ 71 (242)
|.++.++|+|+|++++.++..+||.+|+||+.|+++.+.|+||++|..+..+.||||.|+.+ |. +|..||.
T Consensus 82 L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~~~~~~~CHvF~c~~~~A~~I~~aIgqAF~ 157 (168)
T 3f0w_A 82 LWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCAFA 157 (168)
T ss_dssp EEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEETTTTEEEEEEEEESSSCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecCCCCcEEEEEEEeccchHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999876 55 5556665
No 24
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=99.40 E-value=2.9e-13 Score=111.49 Aligned_cols=72 Identities=19% Similarity=0.416 Sum_probs=63.6
Q ss_pred cccCCceEEEcC-----CCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 2 DLDEGALKLTDP-----ENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 2 ~~~~~~l~lvD~-----~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
.++..+|+++|+ .++.+++.+++++|+|||+|+ |.+.||||+ |..+++|.||||.|+..+..++.|+.++|.
T Consensus 59 ~Vs~~~i~v~~~~~~~~~~~~~l~~c~vr~ISFcgvgk-d~r~FaFI~-~~~~~~f~CHVF~ce~~A~~ls~aV~~Ac~ 135 (144)
T 2dyq_A 59 SVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVGR-DPHTFGLIA-DLGRQSFQCAAFWCQPHAGGLSEAVQAACM 135 (144)
T ss_dssp EECSSEEEEEECC------CCCSSEEEGGGEEEEEECS-STTEEEEEE-ECSSSCEEEEEEECSSCTHHHHHHHHHHHH
T ss_pred EEeccceEEeccccccccccceeeeceEEEEeeeecCC-CCcEEEEEE-eCCCCcEEEEEEecCCchHHHHHHHHHHHH
Confidence 568899999998 588999999999999999987 568999999 667899999999999999999999888875
No 25
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=99.37 E-value=5.8e-13 Score=112.08 Aligned_cols=68 Identities=21% Similarity=0.336 Sum_probs=57.3
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCC--------------------cceeEeEEEeecC
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRS--------------------TRRHMCHVFRCDM 61 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~--------------------t~~~~CHVFrc~~ 61 (242)
.++.++|+|+|++++.+|+++||++|+||+. +++.|+||++|+. +..|.||||.|+.
T Consensus 69 ~IS~~gikv~d~~t~~il~~~~l~~ISf~aD---~~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF~s~~ 145 (172)
T 1aqc_A 69 FILTQRIKVLNADTQETMMDHPLRTISYIAD---IGNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVFESED 145 (172)
T ss_dssp EECSSEEEEEETTTCCEEEEEEGGGEEEEEE---ETTEEEEEECCC----------------------CEEEEEEEECTT
T ss_pred EEECCeEEEEeCCCCceEeccccceEEEEee---CCcEEEEEecCCCccccccccccccccccccCCCCcEEEEEEECcc
Confidence 4688999999999999999999999999983 4567999999976 3599999999998
Q ss_pred chh----hHHHHHHHH
Q psy3532 62 PAR----TIANTLRDI 73 (242)
Q Consensus 62 ~a~----~~a~Af~~~ 73 (242)
|. +|..||.-.
T Consensus 146 -A~~I~~tIGqAF~~a 160 (172)
T 1aqc_A 146 -AQLIAQSIGQAFSVA 160 (172)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHH
Confidence 66 667788744
No 26
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=99.37 E-value=9.6e-13 Score=107.91 Aligned_cols=72 Identities=19% Similarity=0.467 Sum_probs=64.1
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
.++..+|+++|+.++.+|..++|.+|+|||+|+ |.+-||||+.++ +++|.||||-|+..+..++.|...+|.
T Consensus 51 ~Vs~~gi~v~~~~t~e~l~~~~i~~ISFcg~~k-d~k~FafI~~~~-~~~f~CHvF~c~~~A~~vs~aV~~Af~ 122 (140)
T 3dxe_A 51 SVAPATLTILHQQTEAVLGECRVRFLSFLAVGR-DVHTFAFIMAAG-PASFCCHMFWCEPNAASLSEAVQAACM 122 (140)
T ss_dssp EECSSEEEEEETTTCCEEEEEEGGGEEEEEECS-STTEEEEEEEEE-TTEEEEEEEEEESCSHHHHHHHHHHHH
T ss_pred EEcCCEEEEEecCCcceeeeccEEEEeeeccCC-CCcEEEEEecCC-CccEEEEEEecCcchHHHHHHHHHHHH
Confidence 367889999999999999999999999999988 788999999998 999999999999988877666665554
No 27
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=99.31 E-value=3.7e-12 Score=103.94 Aligned_cols=72 Identities=22% Similarity=0.526 Sum_probs=64.2
Q ss_pred cccCCceEEEcCCC-CceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 2 DLDEGALKLTDPEN-LTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 2 ~~~~~~l~lvD~~~-~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
.++..+|++.|+.+ +.+|..++|.+|+|||+| .|.+-||||+.+. +.+|.||||-|+..+..++.|+..+|.
T Consensus 59 ~Vs~~gi~v~~~~~~~~~l~~~~l~~ISFc~~d-~~~k~FaFI~~~~-~~~f~CHvF~c~~~A~~vs~aV~~A~~ 131 (136)
T 1wgu_A 59 NVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVHTFAFIMDTG-NQRFECHVFWCEPNAANVSEAVQAACS 131 (136)
T ss_dssp EEETTEEEEECSSCSSCEEEEEETTTEEEEEEC-SSTTCEEEEEECS-SSCEEEEEEECSSCTHHHHHHHHHHHC
T ss_pred EEccCEEEEEecCCCCceeccceEEEeeeEecC-CCCcEEEEEEcCC-CccEEEEEEEcCcchHHHHHHHHHHHH
Confidence 46788999999987 589999999999999998 6678899999998 999999999999998888888776653
No 28
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=99.28 E-value=2.9e-12 Score=109.45 Aligned_cols=72 Identities=22% Similarity=0.526 Sum_probs=63.7
Q ss_pred cccCCceEEEcCCC-CceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHhh
Q psy3532 2 DLDEGALKLTDPEN-LTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDICK 75 (242)
Q Consensus 2 ~~~~~~l~lvD~~~-~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~~ 75 (242)
.++.++|+++|..+ +.+|..++|.+|+|||+| .|.+-||||+.++ +++|.||||.|+..+..++.|...+|+
T Consensus 59 ~VS~~gI~v~d~~t~~e~l~~~~I~~ISFc~vd-~d~k~FaFI~~~~-~~~f~CHVF~c~k~A~~vs~aV~~Af~ 131 (185)
T 2ysz_A 59 NVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVHTFAFIMDTG-NQRFECHVFWCEPNAANVSEAVQAACS 131 (185)
T ss_dssp EEETTEEEEEESSCSSCEEEEECTTTCCEEECC-SSTTEEEEEEESS-SSCEEEEEEEESSCSTTHHHHHHHHHH
T ss_pred EEecCEEEEEecCCCcceeeeccEEEeeeeccC-CCCcEEEEEecCC-CccEEEEEEEccCchHHHHHHHHHHHH
Confidence 46789999999988 589999999999999998 5567899999998 999999999999988877777776655
No 29
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=99.27 E-value=3.7e-12 Score=108.03 Aligned_cols=71 Identities=23% Similarity=0.533 Sum_probs=65.0
Q ss_pred cccCCceEEEcCCC-CceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchhhHHHHHHHHh
Q psy3532 2 DLDEGALKLTDPEN-LTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPARTIANTLRDIC 74 (242)
Q Consensus 2 ~~~~~~l~lvD~~~-~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~~~a~Af~~~~ 74 (242)
.++..+|+++|+.+ +.+|+.++|.+|+|||+| .|.+-||||+.+. +++|.||||.|+..+..++.|+.++|
T Consensus 105 ~VS~~gI~v~d~~t~~evl~~c~l~~ISFcgvd-~d~k~FaFI~~~~-~~~f~CHVF~cek~A~~ls~aI~aAc 176 (176)
T 2yt0_A 105 NVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVHTFAFIMDTG-NQRFECHVFWCEPNAANVSEAVQAAC 176 (176)
T ss_dssp ECGGGEEEEEESSCTTCEEEEEETTTCCEEEEC-SSTTEEEEEEEEE-TTEEEEEEEEESSCSHHHHHHHHHHC
T ss_pred EEcCCEEEEEecCCCcceecccceEEeeeEccC-CCCcEEEEEEeCC-CCCEEEEEEEccCChhHHHHHHHhhC
Confidence 46889999999998 589999999999999998 5568899999998 99999999999999999999998876
No 30
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=99.26 E-value=6.2e-12 Score=104.77 Aligned_cols=66 Identities=23% Similarity=0.390 Sum_probs=57.2
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC---CcceeEeEEEeecCchh----hHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR---STRRHMCHVFRCDMPAR----TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~---~t~~~~CHVFrc~~~a~----~~a~Af~ 71 (242)
.++.++|+|+|++|+.+++.++|.+|+||+.+ .+.|+||++|. .+..|.||||.|+. |. ++..||.
T Consensus 58 ~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~---~~~f~fIar~~~~~~~~~~~CHVF~~~~-A~~I~~tigqAF~ 130 (162)
T 4dbb_A 58 FISTQRIKVLNADTQEPMMDHPLRTISYIADI---GNIVVLMARRRMPRSQYKMICHVFESED-AQLIAQSIGQAFS 130 (162)
T ss_dssp EEESSEEEEEETTTCCEEEEEEGGGEEEEEEE---TTEEEEEEEECCSTTCEEEEEEEEECTT-HHHHHHHHHHHHH
T ss_pred EEECCEEEEEECCCCcEEeeeecceeEEEEEC---CCEEEEEeccCCCCCCCcEEEEEEECCC-HHHHHHHHHHHHH
Confidence 46789999999999999999999999999964 45899999994 46899999999998 66 6666666
No 31
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=99.16 E-value=5.8e-11 Score=98.60 Aligned_cols=70 Identities=16% Similarity=0.334 Sum_probs=61.4
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh----hHHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR----TIANTLRDI 73 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~----~~a~Af~~~ 73 (242)
.++.++|+|+|++++.+++.+||++|+||+.++.+.+-|+||++|. ..|.||||.++..|. +|+.||...
T Consensus 65 ~IS~~GI~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~--~~h~c~vf~s~~~A~~I~~tigqAF~~a 138 (160)
T 1p3r_A 65 NISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGE--GQHQFFAIKTGQQAEPLVVDLKDLFQVI 138 (160)
T ss_dssp EEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESST--TCEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred EEECCeEEEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecC--CEEEEEEEccHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999986 578888888865554 788888843
No 32
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=99.14 E-value=5.6e-11 Score=97.87 Aligned_cols=69 Identities=16% Similarity=0.284 Sum_probs=60.3
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh----hHHHHHHH
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR----TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~----~~a~Af~~ 72 (242)
.++.++|+|+|++++.+++.+||.+|+||+.++.|.+-|+||++|.. .|.||||.++..|. +|+.||..
T Consensus 66 ~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~~~--~h~f~v~~s~~~A~~I~~tigqAF~~ 138 (152)
T 1ntv_A 66 TISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEG--NHRFVAIKTAQAAEPVILDLRDLFQL 138 (152)
T ss_dssp EEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTT--CCEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred EEECCeEEEEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEcCC--eEEEEEEccHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999974 47888888875555 78888874
No 33
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=99.12 E-value=3.7e-12 Score=110.31 Aligned_cols=59 Identities=20% Similarity=0.437 Sum_probs=52.2
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEee-CCCCCcceEEEEeeCCcceeEeEEEeecC
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGV-GRDNGRDFAYVARDRSTRRHMCHVFRCDM 61 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~-g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~ 61 (242)
.++.++|+|+|++++.+++.+||++|+||+. ++++.+.|+||++|.+ ..+.||||.|..
T Consensus 125 ~IS~~gIkv~d~~t~~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~-~~~~CHVF~cs~ 184 (207)
T 1n3h_A 125 TVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPV-NQRACHILECPE 184 (207)
T ss_dssp EEETTEEEEEETTTTSCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSS-SCCEEEEEECSS
T ss_pred EEECCeEEEEeCCCCceeeeeccceEEEEeccCCCcCCEEEEEecCCC-CCEEEEEEEcCH
Confidence 4678999999999999999999999999995 4556678999999986 778999999964
No 34
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=98.72 E-value=1.6e-08 Score=82.34 Aligned_cols=70 Identities=26% Similarity=0.488 Sum_probs=57.4
Q ss_pred cccCCceEEEcCCCCc-eeeeEeeEEEEEEeeCCCC-----------CcceEEEEeeCC-cceeEeEEEe---ecCchhh
Q psy3532 2 DLDEGALKLTDPENLT-VLNTQPIHTIRVWGVGRDN-----------GRDFAYVARDRS-TRRHMCHVFR---CDMPART 65 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~-~l~s~pI~~I~f~~~g~~~-----------~~~Fa~v~~d~~-t~~~~CHVFr---c~~~a~~ 65 (242)
.++.++|+|+|+.++. .-..||+.+|+|||.++.+ .|-|+||+|+.. +..+.||||. -+-|+.+
T Consensus 45 kVS~qGItLtD~~rk~ffRrhypl~~VsfCa~dP~~r~w~~~~~~~~~riFGFVar~~~~~~~n~CHvF~e~d~~qpa~~ 124 (134)
T 1wvh_A 45 KVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQERKWTKTDGSGPAKLFGFVARKQGSTTDNVCHLFAELDPDQPAAA 124 (134)
T ss_dssp EEETTEEEEEESSSCSSCEEEEEGGGEEEEEECTTCCEEECSSSSCEEEEEEEEECC-CCTTCEEEEEEEECCTTSCHHH
T ss_pred EEEcCCCeEEccCcceEEEEecccCcEEEecCCcccccccccccCCCceEEEEEEccCCCCCCeeEEEecccCCCCCHHH
Confidence 4678999999999887 4789999999999999986 367999999975 5789999995 4557777
Q ss_pred HHHHHH
Q psy3532 66 IANTLR 71 (242)
Q Consensus 66 ~a~Af~ 71 (242)
|.+...
T Consensus 125 Iv~~v~ 130 (134)
T 1wvh_A 125 IVNFVS 130 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 35
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.62 E-value=5.3e-08 Score=90.64 Aligned_cols=74 Identities=20% Similarity=0.365 Sum_probs=59.7
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcce--------------------eEeEEEeecC
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRR--------------------HMCHVFRCDM 61 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~--------------------~~CHVFrc~~ 61 (242)
.++.+.|+++|++++.+|+.++|++|+||+ +++.-|+|+++++..+. |.||||-|+.
T Consensus 71 ~IS~~gi~v~~~~t~~~~~~~~l~~IS~~~---d~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~ChvF~s~~ 147 (388)
T 3suz_A 71 FISTQRIKVLNADTQETMMDHALRTISYIA---DIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFESED 147 (388)
T ss_dssp EECSSEEEEEETTTCCEEEEEEGGGEEEEE---ECSSEEEEEEEECCCCCC-------------CCCCEEEEEEEEECTT
T ss_pred EEEeceEEEEecCCcChhhhccccceeEEe---ecCceEEEEEecCCCccccccccccCccccccccccceEEEEecccC
Confidence 367889999999999999999999999994 45567999999976655 5699999987
Q ss_pred chh----hHHHHHHHHhhhHHH
Q psy3532 62 PAR----TIANTLRDICKKIMI 79 (242)
Q Consensus 62 ~a~----~~a~Af~~~~~~~~~ 79 (242)
|. ++..||.-.-++.+.
T Consensus 148 -a~~i~~ti~qaf~~~y~~~l~ 168 (388)
T 3suz_A 148 -AQLIAQSIGQAFSVAYQEFLR 168 (388)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhhhhcc
Confidence 55 677777755455544
No 36
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=98.55 E-value=8e-07 Score=73.40 Aligned_cols=115 Identities=17% Similarity=0.312 Sum_probs=82.2
Q ss_pred cceeEEEEeeeeeEecCCc------h-hhHHHHHHHHHHhcCCC-CCc--eeeEEEEcCCeEEEEecCCCcCceeeeeEE
Q psy3532 123 PKKILRAQYLGSIQVSKPG------G-MDILNNAIDTLVSTVPQ-HLW--QDVNIAVAPSMITIHSTDEETGGTLMAECR 192 (242)
Q Consensus 123 ~~~~f~vkyLGsv~V~~~~------G-~dVln~Ai~~i~~~~~~-~~w--~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~ 192 (242)
..-.|+|||||.++=-.-- | .|+| +.|+........ ..| ..|.|+||-.||+|.+.+++ .++...+
T Consensus 13 ~~aE~~VKylG~i~~l~~~~~~~~~~~~ell-~~ID~aQq~gkLP~~~~~Edvi~svSkyGvkl~~~d~~---dvl~Rip 88 (154)
T 4dx8_A 13 TCAEFRIKYVGAIEKLKLSEGKGLEGPLDLI-NYIDVAQQDGKLPFVPPEEEFIMGVSKYGIKVSTSDQY---DVLHRHA 88 (154)
T ss_dssp SCEEEEEEEEEEEEEESCC---CCCHHHHHH-HHHHHHHHTTSSCSSCCSCCEEEEEETTEEEEEETTSC---CEEEEEE
T ss_pred ceeEEEEEEEEEEeecccccCccccCcHHHH-HHHHHHHHhCcCCCCCCcCeEEEEEeccCcEEEeccCc---ccccchh
Confidence 4556999999998753321 2 4555 455544322111 122 24999999999999988766 7777777
Q ss_pred EEEE----Eeee-cCCCCceEEEEE-eCCCCceEEEEEEcCCC--chHHHHHHHHHh
Q psy3532 193 VRFL----SFLG-IGHNVKQCAFIM-HTAQDLFIAHVFVTEPS--SGALCKTIEAAC 241 (242)
Q Consensus 193 vr~i----SF~g-vgkd~k~FafI~-~~~~~~f~CHVF~ce~~--A~~lseaV~aAc 241 (242)
++.| ||.- .|+..++|+..+ ++.+.++.||||+|... |..||..++.++
T Consensus 89 L~~I~~~v~YdDg~g~g~~vla~KT~~~~~~~~~~hv~Qc~s~~~A~~iC~~l~~~f 145 (154)
T 4dx8_A 89 LYLIIRMVCYDDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICKVLSTAF 145 (154)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEECTTSCCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHhhhheeeccccccccEEEEEEecCCCCceEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6644 4533 266778899998 78899999999999877 889999998875
No 37
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=98.36 E-value=5.8e-07 Score=74.80 Aligned_cols=70 Identities=21% Similarity=0.450 Sum_probs=56.7
Q ss_pred cccCCceEEEcCCCCcee-eeEeeEEEEEEeeCCCCC----------cceEEEEeeCCc-ceeEeEEEee---cCchhhH
Q psy3532 2 DLDEGALKLTDPENLTVL-NTQPIHTIRVWGVGRDNG----------RDFAYVARDRST-RRHMCHVFRC---DMPARTI 66 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l-~s~pI~~I~f~~~g~~~~----------~~Fa~v~~d~~t-~~~~CHVFrc---~~~a~~~ 66 (242)
.++.+++.|+|...+-.+ ..||+.+|+|||.++.+. +-|+||+|+..+ ....||||-- +-||.+|
T Consensus 57 kVS~qGItLtD~~rK~FfrrHypl~~IsFC~~DP~~r~w~~~~~~~~riFGFVARk~~s~~~n~CHlFae~dp~QPAsaI 136 (157)
T 3hqc_A 57 KVSAQGITLTDNQRKLFFRRHYPVNSITFSSTDPQDRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPDQPAGAI 136 (157)
T ss_dssp EEETTEEEEEEEETTEEEEEEEEGGGEEEEEECTTCCEEECTTSCEEEEEEEEEEETTEEEEEEEEEEECCBTTBCHHHH
T ss_pred EEeCCCceEEecccceeehhcCcccceEeecCChhhccccccCCCcccEEEEEEccCCCCCCeeEEEeeccCCCCCHHHH
Confidence 467899999999877654 459999999999999975 449999999864 5999999975 4566677
Q ss_pred HHHHH
Q psy3532 67 ANTLR 71 (242)
Q Consensus 67 a~Af~ 71 (242)
.+-..
T Consensus 137 vnfv~ 141 (157)
T 3hqc_A 137 VTFIT 141 (157)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 38
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=97.88 E-value=0.00016 Score=59.14 Aligned_cols=114 Identities=12% Similarity=0.174 Sum_probs=95.7
Q ss_pred eeEEEEeeeeeEecCCchhhHHHHHHHHHHhc-CCCCCce-eeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeee--
Q psy3532 125 KILRAQYLGSIQVSKPGGMDILNNAIDTLVST-VPQHLWQ-DVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLG-- 200 (242)
Q Consensus 125 ~~f~vkyLGsv~V~~~~G~dVln~Ai~~i~~~-~~~~~w~-pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~g-- 200 (242)
-.|+|.-|=...+.+..|..-..+||++|..- ..+.-|. ...|.|.+..|.+.|..+. +.+.+.++..|--|-
T Consensus 9 ~qy~VeHL~Tf~l~~~~~~~~~~D~irkL~~ld~kg~iW~Q~m~L~v~~~~v~LlD~et~---eelE~fpl~~I~~~~av 85 (140)
T 2cy5_A 9 SQYHVNHLVTFCLGEEDGVHTVEDASRKLAVMDSQGRVWAQEMLLRVSPSQVTLLDPVSK---EELESYPLDAIVRCDAV 85 (140)
T ss_dssp EEEEEEEEEEEECCTTSSCCSHHHHHHHHHHHHHTTCCCCEEEEEEECSSEEEEECTTTC---CEEEEEEGGGEEEEEEE
T ss_pred ccEEEeeeEEEEeCCcCCcCCHHHHHHHHHhHHHcCCcccceeEEEECCCeEEEEccCcc---chhhcCChhhceecccc
Confidence 45999999999999999999999999999842 2456785 8999999999999998776 778888888776663
Q ss_pred --cCCCCceEEEEE-eCCCCceEEEEEEcC-CCchHHHHHHHHHh
Q psy3532 201 --IGHNVKQCAFIM-HTAQDLFIAHVFVTE-PSSGALCKTIEAAC 241 (242)
Q Consensus 201 --vgkd~k~FafI~-~~~~~~f~CHVF~ce-~~A~~lseaV~aAc 241 (242)
-++-+-++.|++ +++..+-+=|+|.|+ -.|..|.+-|+.|-
T Consensus 86 ~~~~~y~siLllv~q~~~~~~~~iH~FQc~ev~A~~v~~di~~al 130 (140)
T 2cy5_A 86 MPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDIQGAL 130 (140)
T ss_dssp CCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHHHHHH
T ss_pred CCccccCcEEEEEEecCCCCCccEEEEEeccccHHHHHHHHHHHH
Confidence 345588999999 666889999999996 66779999999884
No 39
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=97.29 E-value=0.00074 Score=55.11 Aligned_cols=71 Identities=18% Similarity=0.275 Sum_probs=56.0
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCc---ceEEEEeeCCcceeEeEEEeecC-chhhHHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR---DFAYVARDRSTRRHMCHVFRCDM-PARTIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~---~Fa~v~~d~~t~~~~CHVFrc~~-~a~~~a~Af~ 71 (242)
|.+.++.|.|+|+.|+.+|.+||+..|.=|-.-.+..+ .+.|++.+.+....--|.|.|+. +|..+.+-++
T Consensus 53 L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av~~~~~y~siLllv~q~~~~~~~~iH~FQc~ev~A~~v~~di~ 127 (140)
T 2cy5_A 53 LRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDIQ 127 (140)
T ss_dssp EEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHHH
T ss_pred EEECCCeEEEEccCccchhhcCChhhceeccccCCccccCcEEEEEEecCCCCCccEEEEEeccccHHHHHHHHH
Confidence 45678899999999999999999999998854333333 39999999988888899999985 4445555443
No 40
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=97.09 E-value=0.0015 Score=53.93 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=55.3
Q ss_pred CcccCCceEEEcCCCCceeeeEeeEEEE--EEeeCCC-CCc-ceEEEEeeCCcceeEeEEEeecCchh------hHHHHH
Q psy3532 1 MDLDEGALKLTDPENLTVLNTQPIHTIR--VWGVGRD-NGR-DFAYVARDRSTRRHMCHVFRCDMPAR------TIANTL 70 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~~~l~s~pI~~I~--f~~~g~~-~~~-~Fa~v~~d~~t~~~~CHVFrc~~~a~------~~a~Af 70 (242)
|.++.-.|+|.|.++..+++..|++.|. +|-.+.. .++ .|+--..|.++..++||||-|..... .+.++|
T Consensus 66 ~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~YdDg~g~g~~vla~KT~~~~~~~~~~hv~Qc~s~~~A~~iC~~l~~~f 145 (154)
T 4dx8_A 66 MGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCYDDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICKVLSTAF 145 (154)
T ss_dssp EEEETTEEEEEETTSCCEEEEEEGGGEEEEEEEECCSSSCCEEEEEEEECTTSCCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEeccCcEEEeccCcccccchhHHHhhhheeeccccccccEEEEEEecCCCCceEEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 5678889999999999999999999998 7773333 112 36777788999999999999987533 455665
Q ss_pred H
Q psy3532 71 R 71 (242)
Q Consensus 71 ~ 71 (242)
+
T Consensus 146 ~ 146 (154)
T 4dx8_A 146 D 146 (154)
T ss_dssp H
T ss_pred H
Confidence 5
No 41
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=76.33 E-value=3.1 Score=34.76 Aligned_cols=72 Identities=13% Similarity=0.258 Sum_probs=48.6
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh-hHHHHHHHHhhhHHHHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR-TIANTLRDICKKIMIER 81 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~-~~a~Af~~~~~~~~~er 81 (242)
+...+|.++|+.++.++.++|-.+|.=|+-++ +.|.....+.... .|.|+++.+ .|+.-+.....-++..|
T Consensus 149 I~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~---~~f~I~~~~~~~~-----~~~~~T~q~~~I~~Li~~Yi~~~~~~r 220 (222)
T 4f7g_A 149 ITKECVMRVDEKTKEVIQEWSLTNIKRWAASP---KSFTLDFGDYQDG-----YYSVQTTEGEQIAQLIAGYIDIILKKK 220 (222)
T ss_dssp ECSSEEEEECTTTCCEEEEEEGGGCCEEEECS---SEEEEECCTTSSS-----CEEEECSCHHHHHHHHHHHHHHTC---
T ss_pred EcCCcEEEEcCCCCceeEeccHHHeeeeccCC---CEEEEEECCccce-----EEEEECCcHHHHHHHHHHHHHHHHHhh
Confidence 45668999999999999999988887777554 3577666654332 377777544 78887777766555544
Q ss_pred h
Q psy3532 82 S 82 (242)
Q Consensus 82 ~ 82 (242)
|
T Consensus 221 ~ 221 (222)
T 4f7g_A 221 K 221 (222)
T ss_dssp -
T ss_pred c
Confidence 3
No 42
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=65.52 E-value=14 Score=32.61 Aligned_cols=70 Identities=10% Similarity=0.147 Sum_probs=49.6
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCCCchHHHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAA 240 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~~A~~lseaV~aA 240 (242)
.++.|-|+..||.|.+..++ +++...+...|| +++..+.++|-.-..+.. ..+.|.... +..|++-|..=
T Consensus 242 ~~~~LgV~~~Gv~v~~~~tk---~~l~~~~~~~is-w~~s~~~~~f~i~~~~~~---~~~~~~t~q-~~~i~~li~~~ 311 (322)
T 4dxa_B 242 IPVYVGVNIKGLHLLNMETK---ALLISLKYGCFM-WQLGDTDTCFQIHSMENK---MSFIVHTKQ-AGLVVKLLMKL 311 (322)
T ss_dssp EEEEEEECSSEEEEEETTTC---CEEEEEETTSEE-EEECSSTTEEEEEESSSC---CEEEEECTT-HHHHHHHHHHH
T ss_pred CeEEEEEccCceEEEcCCCc---eeeeccccceeE-EeecCCCCEEEEEECCCC---ccEEEEeCc-HHHHHHHHHHH
Confidence 47899999999999998877 889988888898 777667777755443212 245555433 55777766543
No 43
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=63.93 E-value=19 Score=27.35 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=48.2
Q ss_pred CcccCCceEEEcCCCC-ceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-CcceeEeEEEeecCchhhHHHHHHHH
Q psy3532 1 MDLDEGALKLTDPENL-TVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-STRRHMCHVFRCDMPARTIANTLRDI 73 (242)
Q Consensus 1 ~~~~~~~l~lvD~~~~-~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-~t~~~~CHVFrc~~~a~~~a~Af~~~ 73 (242)
|.+.++.|.|.|+.+. .++..-|+..||=+|.+.+ -|.|-+.-+ .|..- -..|+|.. +..|.+.+++.
T Consensus 25 L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~~---~FsFEaGRrC~tG~G-~f~F~~~~-~~~If~~v~~a 94 (103)
T 1j0w_A 25 LQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTT---WFTFEAGRMCETGEG-LFIFQTRD-GEAIYQKVHSA 94 (103)
T ss_dssp EEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECSS---EEEEEECSSSSSCSE-EEEEECSC-HHHHHHHHHHH
T ss_pred EEECCCEEEEEecCCCCcceEEeeHHHHhhcCccCC---EEEEEeCCCCCCCCc-EEEEEcCC-HHHHHHHHHHH
Confidence 4567889999999875 6899999999999999663 688866532 22221 36788864 34677776644
No 44
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=53.49 E-value=29 Score=30.45 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=44.7
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh-hHHHHHHHHhhhH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR-TIANTLRDICKKI 77 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~-~~a~Af~~~~~~~ 77 (242)
+...+|.++|+.++.+|.++|...|+ |+.... ..-|.....+.. +-+.|.++.+ .|++=+...|..+
T Consensus 248 V~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s~~-~~~f~i~~~~~~------~~~~~~t~q~~~i~~li~~~~~~~ 315 (322)
T 4dxa_B 248 VNIKGLHLLNMETKALLISLKYGCFM-WQLGDT-DTCFQIHSMENK------MSFIVHTKQAGLVVKLLMKLNGQL 315 (322)
T ss_dssp ECSSEEEEEETTTCCEEEEEETTSEE-EEECSS-TTEEEEEESSSC------CEEEEECTTHHHHHHHHHHHHHTC
T ss_pred EccCceEEEcCCCceeeeccccceeE-EeecCC-CCEEEEEECCCC------ccEEEEeCcHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999 985322 123444443322 1245555444 7777777776644
No 45
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=53.26 E-value=28 Score=26.54 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=45.7
Q ss_pred CcccCCceEEEcC----CCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-CcceeEeEEEeecCchhhHHHHHHH
Q psy3532 1 MDLDEGALKLTDP----ENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-STRRHMCHVFRCDMPARTIANTLRD 72 (242)
Q Consensus 1 ~~~~~~~l~lvD~----~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-~t~~~~CHVFrc~~~a~~~a~Af~~ 72 (242)
|.+.++.|.|.++ .+++.+...|+..||=+|.+.+ -|.|=+--+ .|..- -..|+|.-.+ .|.+++++
T Consensus 27 L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~~---~FsFEaGRrc~tG~G-~f~F~~~~~~-~If~~l~~ 98 (107)
T 2v76_A 27 LRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKV---MFSFEAGRRCPSGPG-TFTFQTAQGN-DIFQAVET 98 (107)
T ss_dssp EEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECSS---EEEEEECTTSTTCSE-EEEEECSCHH-HHHHHHHH
T ss_pred EEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccCC---EEEEEecCCCCCCCc-EEEEEeCCHH-HHHHHHHH
Confidence 4567888999974 5677999999999999998543 688855432 22222 3678886443 66666664
No 46
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=51.58 E-value=44 Score=23.67 Aligned_cols=68 Identities=16% Similarity=0.226 Sum_probs=44.4
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|.... +.+.......++..+.+.......++.|.|.....+.+ -+.|+++..+. ..-.||+.
T Consensus 30 vL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~---~~~~~a~s~~e~~~Wi~al~~ 100 (109)
T 1wgq_A 30 VIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMV---FYVFKADDAHSTQRWIDAFQE 100 (109)
T ss_dssp EEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEE---EEEEECSSHHHHHHHHHHHHH
T ss_pred EEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCe---EEEEECCCHHHHHHHHHHHHH
Confidence 56778888886 44456678888888887776665666666665543333 36799987654 44455553
No 47
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=50.74 E-value=24 Score=25.80 Aligned_cols=68 Identities=9% Similarity=-0.050 Sum_probs=40.7
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRDI 73 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~~ 73 (242)
+|.++.|..+. +.+.......++..+.....+...++.|.|.....+ ..+.|.|+..+. ..-.||+..
T Consensus 40 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~----r~~~l~a~s~~e~~~Wi~al~~~ 110 (126)
T 1fao_A 40 TLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPF----RTFYLCAKTGVEADEWIKILRWK 110 (126)
T ss_dssp EEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEETT----EEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeCC----cEEEEECCCHHHHHHHHHHHHHH
Confidence 56777888874 444556667777666644445555555555544321 357799987665 444454433
No 48
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=49.09 E-value=44 Score=26.30 Aligned_cols=66 Identities=18% Similarity=0.257 Sum_probs=45.2
Q ss_pred CcccCCceEEEcC----CCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-CcceeEeEEEeecCchhhHHHHHH
Q psy3532 1 MDLDEGALKLTDP----ENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-STRRHMCHVFRCDMPARTIANTLR 71 (242)
Q Consensus 1 ~~~~~~~l~lvD~----~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-~t~~~~CHVFrc~~~a~~~a~Af~ 71 (242)
|.+.++.|.|.|+ .++..+...|+..||=+|.+. .-|.|=+--+ .|..- -..|+|.-.+ .|-++++
T Consensus 29 L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~---~~FsFEaGRrC~tGeG-~f~F~t~~~~-~If~~l~ 99 (127)
T 1p5t_A 29 LRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDK---VMFSFEAGRRCPSGPG-TFTFQTSQGN-DIFQAVE 99 (127)
T ss_dssp EEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECS---SEEEEEECTTSTTCSE-EEEEECSCHH-HHHHHHH
T ss_pred EEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccC---CEEEEEecCCCCCCCc-EEEEEeCCHH-HHHHHHH
Confidence 4567889999984 467799999999999999754 3688865532 22221 3678886443 5555555
No 49
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=46.57 E-value=84 Score=23.82 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=50.3
Q ss_pred eeEEEEcCCeEEEEecCCC-cCceeeeeEEEEEEEeeecCCCCceEEEEEe----CCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 164 DVNIAVAPSMITIHSTDEE-TGGTLMAECRVRFLSFLGIGHNVKQCAFIMH----TAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 164 pv~l~Vs~~~i~i~~~~~~-~~~e~l~ec~vr~iSF~gvgkd~k~FafI~~----~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
+..|.|.+..|.+.+.... ...+.+.+.++++|-=+|.+ ..+|.|-+- +|...| .|.|.. +.+|.++|+
T Consensus 24 ~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d--~~~FsFEaGRrc~tG~G~f---~F~~~~-~~~If~~l~ 97 (107)
T 2v76_A 24 SYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRD--KVMFSFEAGRRCPSGPGTF---TFQTAQ-GNDIFQAVE 97 (107)
T ss_dssp EEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEEC--SSEEEEEECTTSTTCSEEE---EEECSC-HHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCcc--CCEEEEEecCCCCCCCcEE---EEEeCC-HHHHHHHHH
Confidence 7899999999999864211 11266777887777777764 467999883 344543 466655 779999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 98 ~~i 100 (107)
T 2v76_A 98 TAI 100 (107)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 50
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=45.96 E-value=1.1e+02 Score=24.40 Aligned_cols=64 Identities=8% Similarity=0.104 Sum_probs=38.7
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeE---EEEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcC-CCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAEC---RVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTE-PSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec---~vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce-~~A~~lseaV~ 238 (242)
.++.|-|++.||.+.+..+. +++... +|++++| ..+.|-.-..+..+. .|+++ +.+..|+.-|.
T Consensus 132 ~~~~Lgi~~~Gi~~~~~~~~---~~l~~~~~~~I~~~~~-----~~~~f~i~~~~~~~~----~~~~~t~~~~~i~~Li~ 199 (206)
T 1mix_A 132 VPRLLGITKECVMRVDEKTK---EVIQEWSLTNIKRWAA-----SPKSFTLDFGDYQDG----YYSVQTTEGEQIAQLIA 199 (206)
T ss_dssp EEEEEEECSSEEEEEETTTC---CEEEEEEGGGCCEEEE-----CSSEEEEECGGGSSS----CEEEECSCHHHHHHHHH
T ss_pred CcEEEEEcccceEEeCCCCC---ceeeeeehhHeeeccc-----CCCEEEEEeCcccce----EEEEECCcHHHHHHHHH
Confidence 68999999999999998776 655555 4566666 234455333333221 23333 34556665543
No 51
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=42.31 E-value=1.1e+02 Score=24.05 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=51.3
Q ss_pred eeEEEEcCCeEEEEecCCC-cCceeeeeEEEEEEEeeecCCCCceEEEEEe----CCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 164 DVNIAVAPSMITIHSTDEE-TGGTLMAECRVRFLSFLGIGHNVKQCAFIMH----TAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 164 pv~l~Vs~~~i~i~~~~~~-~~~e~l~ec~vr~iSF~gvgkd~k~FafI~~----~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
+..|.|.+..|.+.+..++ ...+.+.+.++.+|-=+|. |..+|.|-+- +|...| .|.|.. +.+|-.+|+
T Consensus 26 ~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~--d~~~FsFEaGRrC~tGeG~f---~F~t~~-~~~If~~l~ 99 (127)
T 1p5t_A 26 SYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGR--DKVMFSFEAGRRCPSGPGTF---TFQTSQ-GNDIFQAVE 99 (127)
T ss_dssp EEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEE--CSSEEEEEECTTSTTCSEEE---EEECSC-HHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCc--cCCEEEEEecCCCCCCCcEE---EEEeCC-HHHHHHHHH
Confidence 7899999999999874321 1226677778777776664 4578999883 344444 566665 779999999
Q ss_pred HHh
Q psy3532 239 AAC 241 (242)
Q Consensus 239 aAc 241 (242)
+|-
T Consensus 100 ~~i 102 (127)
T 1p5t_A 100 AAI 102 (127)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 52
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.47 E-value=62 Score=22.92 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=42.7
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCCC--CCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGRD--NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~--~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|...+ +.+.......++..+.+..++.. .++.|.|.....+.+ .+.|.|+..+. ..-.||+.
T Consensus 34 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r---~~~l~a~s~~e~~~Wi~al~~ 106 (117)
T 2d9y_A 34 VLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR---TYFFSAESPEEQEAWIQAMGE 106 (117)
T ss_dssp EEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSC---EEEEECSSHHHHHHHHHHHHH
T ss_pred EECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCc---EEEEEcCCHHHHHHHHHHHHH
Confidence 56778888885 55566777788877776655443 345577766543333 46788987554 44455543
No 53
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=41.23 E-value=37 Score=24.46 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=43.3
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCC--CCCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGR--DNGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRDI 73 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~--~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~~ 73 (242)
+|.++.|..+. +.+.......++..+.+.-.+. ..++.|.|.....+.+ .+.|.|+..+. ..-+||+.+
T Consensus 34 vL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r---~~~l~a~s~~e~~~Wi~al~~a 107 (123)
T 1upq_A 34 VLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMR---TYVLAADTLEDLRGWLRALGRA 107 (123)
T ss_dssp EEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSC---CEEEECSSHHHHHHHHHHHHHH
T ss_pred EEeCCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCe---EEEEECCCHHHHHHHHHHHHHH
Confidence 56788888884 5555566666666666655543 3446688877665433 35699987665 455555543
No 54
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=40.89 E-value=47 Score=23.01 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=39.7
Q ss_pred cccCCceEEEcCC-CCceeeeEeeEEEEEEee---CCCCCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTDPE-NLTVLNTQPIHTIRVWGV---GRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD~~-~~~~l~s~pI~~I~f~~~---g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|...... +.......++..+.+-.. ..+.++.|.|.....+.+ .+.|.|+..+. ..-.||+.
T Consensus 29 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r---~~~l~a~s~~e~~~Wi~ai~~ 102 (108)
T 1u5d_A 29 VVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRR---TYEFTATSPAEARDWVDQISF 102 (108)
T ss_dssp EEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSC---CEEEECSSHHHHHHHHHHHHH
T ss_pred EEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCc---EEEEECCCHHHHHHHHHHHHH
Confidence 5667788877644 344566677766665543 233345566666554433 35688987665 44444443
No 55
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=40.56 E-value=62 Score=26.63 Aligned_cols=65 Identities=8% Similarity=0.090 Sum_probs=40.8
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeE---EEEEEEeeecCCCCceEEEEEeCCCCceEEEEEEcCC-CchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAEC---RVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEP-SSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec---~vr~iSF~gvgkd~k~FafI~~~~~~~f~CHVF~ce~-~A~~lseaV~ 238 (242)
.++.|-|++.||.+.+..+. +++... .|+.++|. .+.|-+-..+..+. .|.|+. .+..|+.-|.
T Consensus 143 ~~~~LgI~~~GI~v~~~~tk---~~l~~~~~~~I~~~~~~-----~~~f~I~~~~~~~~----~~~~~T~q~~~I~~Li~ 210 (222)
T 4f7g_A 143 VPRLLGITKECVMRVDEKTK---EVIQEWSLTNIKRWAAS-----PKSFTLDFGDYQDG----YYSVQTTEGEQIAQLIA 210 (222)
T ss_dssp EEEEEEECSSEEEEECTTTC---CEEEEEEGGGCCEEEEC-----SSEEEEECCTTSSS----CEEEECSCHHHHHHHHH
T ss_pred CCEEEEEcCCcEEEEcCCCC---ceeEeccHHHeeeeccC-----CCEEEEEECCccce----EEEEECCcHHHHHHHHH
Confidence 58899999999999998776 767666 45555543 24565444433222 244433 4667777665
Q ss_pred H
Q psy3532 239 A 239 (242)
Q Consensus 239 a 239 (242)
.
T Consensus 211 ~ 211 (222)
T 4f7g_A 211 G 211 (222)
T ss_dssp H
T ss_pred H
Confidence 3
No 56
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.37 E-value=45 Score=23.94 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=41.3
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCCC--CCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGRD--NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~--~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|.... +.+.......++..+.+..++.. .++.|.|.....+.+ .+.|.|+..+. ..-.||+.
T Consensus 45 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r---~~~l~a~s~~e~~~Wi~al~~ 117 (122)
T 2yry_A 45 VLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVR---TYFFSAESPEEQEAWIQAMGE 117 (122)
T ss_dssp EEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSC---EEEEECSSHHHHHHHHHHHHH
T ss_pred EEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCc---EEEEEcCCHHHHHHHHHHHHH
Confidence 56778888884 55556667777766555555433 345677766543333 46799987654 44455543
No 57
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=32.33 E-value=75 Score=27.39 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=53.3
Q ss_pred cccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeC-CcceeEeEEEeecCchhhHHHHHHHHhhh
Q psy3532 2 DLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDR-STRRHMCHVFRCDMPARTIANTLRDICKK 76 (242)
Q Consensus 2 ~~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~-~t~~~~CHVFrc~~~a~~~a~Af~~~~~~ 76 (242)
-+.++.+.|.|+...++|..-|+..+|=+|+.++ .|.|-+..+ ++..- -|+|.|. .+..|...|.-+++.
T Consensus 136 hl~~~~l~L~~~~~~~~l~~W~L~~LRRYG~~~~---~F~FE~grrC~~geG-~f~f~t~-qge~I~~lfd~~~rg 206 (224)
T 3ml4_A 136 HLCNDILVLARDIPPTVMGQWKLSDLRRYGAVPN---GFIFEGGTRCGYWAG-VFFLSSA-EGEQMSFLFDCIVRG 206 (224)
T ss_dssp EEETTEEEEEETTTTEEEEEEEGGGEEEEEEETT---EEEEEECGGGGGGCE-EEEEECS-CHHHHHHHHHHHTTT
T ss_pred EecCCcEEEccCCCccEEEEcchHHhhhhcccCC---EeEEecCCcCCCCCC-EEEEecC-cHHHHHHHHHHHHcC
Confidence 3567889999999999999999999999998765 798876532 22121 2788884 566888888877653
No 58
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=31.16 E-value=83 Score=22.66 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=41.4
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCCC--CCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGRD--NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLR 71 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~--~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~ 71 (242)
+|.++.|.... +.+.......+|..+.+.-+... .++.|.|.....+.+. +.|.|+..+. ..-+||+
T Consensus 44 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~---~~l~a~s~~e~~~Wi~al~ 115 (128)
T 2dkp_A 44 VLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRT---YYFCTDTGKEMELWMKAML 115 (128)
T ss_dssp EEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCC---EEEECSSHHHHHHHHHHHH
T ss_pred EEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCE---EEEEcCCHHHHHHHHHHHH
Confidence 56778888886 44556677777766665554432 2456777766544333 5699987655 4445554
No 59
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.61 E-value=35 Score=26.28 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=50.1
Q ss_pred eeeEEEEcCCeEEE-EecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEE----eCCCCceEEEEEEcCCCchHHHHHH
Q psy3532 163 QDVNIAVAPSMITI-HSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIM----HTAQDLFIAHVFVTEPSSGALCKTI 237 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i-~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~----~~~~~~f~CHVF~ce~~A~~lseaV 237 (242)
.+..|.|.+..|.+ .+.++. ..+.+-++++|-=+|.+ ...|.|-+ .+|...| .|.| +++.+|-++|
T Consensus 28 G~y~L~l~~~~l~L~~~~~~~---~~l~~Wpl~~LRryG~d--~~~FsfEaGRrC~tGeG~f---~F~t-~~~~~if~~l 98 (113)
T 2dlw_A 28 GSYTLRAGESALELWGGPEPG---TQLYDWPYRFLRRFGRD--KVTFSFEAGRRCVSGEGNF---EFET-RQGNEIFLAL 98 (113)
T ss_dssp SEEEEEECSSBEECCCSSSSC---CCSSCCBGGGCCCEEEE--TTEEEEEECSSCSSCSEEE---EECC-STHHHHHHHH
T ss_pred ccEEEEEcCCEEEEEecCCCC---CceEEEEhHHhhhcCcc--CCEEEEEecCCCCCCCCEE---EEEc-CCHHHHHHHH
Confidence 48899999999999 454443 66777777766656654 45899988 3445544 4555 5688999999
Q ss_pred HHHh
Q psy3532 238 EAAC 241 (242)
Q Consensus 238 ~aAc 241 (242)
++|-
T Consensus 99 ~~~i 102 (113)
T 2dlw_A 99 EEAI 102 (113)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 60
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=29.27 E-value=1.1e+02 Score=27.24 Aligned_cols=65 Identities=6% Similarity=0.069 Sum_probs=41.0
Q ss_pred ceeeEEEEcCCeEEEEecCCCcCceeeeeEE---EEEEEeeecCCCCceEEEEEeCC-CCceEEEEEEcCCCchHHHHHH
Q psy3532 162 WQDVNIAVAPSMITIHSTDEETGGTLMAECR---VRFLSFLGIGHNVKQCAFIMHTA-QDLFIAHVFVTEPSSGALCKTI 237 (242)
Q Consensus 162 w~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~---vr~iSF~gvgkd~k~FafI~~~~-~~~f~CHVF~ce~~A~~lseaV 237 (242)
..++.|-|++.||.+.+..+. +++...+ |+.++|. .+.|-....+. ...|.| .. +.|..|+.=|
T Consensus 296 ~~~~~LgI~~~GI~v~~~~~k---~~l~~~~~~~I~~~~~~-----~~~f~I~~~~~~~~~~~~---~T-~~~~~I~~Li 363 (371)
T 3ivf_A 296 LVPRLLGITKECVMRVDEKTK---EVIQEWSLTNIKRWAAS-----PKSFTLDFGDYQDGYYSV---QT-TEGEQIAQLI 363 (371)
T ss_dssp EEEEEEEECSSEEEEEETTTC---CEEEEEEGGGCCEEEEE-----TTEEEEECGGGSSSCEEE---EC-SCHHHHHHHH
T ss_pred CccEEEEEcCCcEEEEcCCCC---ceEEeeehhheeeeecC-----CCEEEEEECCccCcEEEE---EC-ChHHHHHHHH
Confidence 357899999999999998776 7776664 5555554 45676655432 233332 22 4455666554
Q ss_pred H
Q psy3532 238 E 238 (242)
Q Consensus 238 ~ 238 (242)
.
T Consensus 364 ~ 364 (371)
T 3ivf_A 364 A 364 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=26.48 E-value=2e+02 Score=21.42 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=42.6
Q ss_pred cccCCceEEEc-C---CCCceeeeEeeEEEEEEeeCCCCC--------cceEEEEeeCCcce---eEeEEEeecCchh--
Q psy3532 2 DLDEGALKLTD-P---ENLTVLNTQPIHTIRVWGVGRDNG--------RDFAYVARDRSTRR---HMCHVFRCDMPAR-- 64 (242)
Q Consensus 2 ~~~~~~l~lvD-~---~~~~~l~s~pI~~I~f~~~g~~~~--------~~Fa~v~~d~~t~~---~~CHVFrc~~~a~-- 64 (242)
||.++.|--+- + .+...+.+.++..-.+-....+++ +.+.|+...++..+ -.=++|+++.++.
T Consensus 28 VL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~ 107 (120)
T 4a6h_A 28 VLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMM 107 (120)
T ss_dssp EECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHH
T ss_pred EEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHH
Confidence 45666666662 2 145577888887766666665544 55555555444321 1368899988766
Q ss_pred hHHHHHHHH
Q psy3532 65 TIANTLRDI 73 (242)
Q Consensus 65 ~~a~Af~~~ 73 (242)
..-+|++.+
T Consensus 108 ~Wv~aI~~~ 116 (120)
T 4a6h_A 108 SWFDNLKIL 116 (120)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555665544
No 62
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=24.22 E-value=59 Score=26.05 Aligned_cols=58 Identities=14% Similarity=0.271 Sum_probs=38.3
Q ss_pred ccCCceEEEcCCCCceeeeEeeEEEEEEeeCCCCCcceEEEEeeCCcceeEeEEEeecCchh-hHHH
Q psy3532 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR-TIAN 68 (242)
Q Consensus 3 ~~~~~l~lvD~~~~~~l~s~pI~~I~f~~~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~-~~a~ 68 (242)
+...+|.++|+.++.++..+|-.+|+=|+.+++ .|.....+.... .|.|+++.+ .|+.
T Consensus 138 i~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~~~---~f~i~~~~~~~~-----~~~~~t~~~~~i~~ 196 (206)
T 1mix_A 138 ITKECVMRVDEKTKEVIQEWSLTNIKRWAASPK---SFTLDFGDYQDG-----YYSVQTTEGEQIAQ 196 (206)
T ss_dssp ECSSEEEEEETTTCCEEEEEEGGGCCEEEECSS---EEEEECGGGSSS-----CEEEECSCHHHHHH
T ss_pred EcccceEEeCCCCCceeeeeehhHeeecccCCC---EEEEEeCcccce-----EEEEECCcHHHHHH
Confidence 345678999999999999999888877776433 466555544322 466665433 4443
No 63
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=23.29 E-value=1.3e+02 Score=21.06 Aligned_cols=68 Identities=10% Similarity=0.139 Sum_probs=40.3
Q ss_pred cccCCceEEEcCC-CCceeeeEeeEEEEEEe-eCCCCCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTDPE-NLTVLNTQPIHTIRVWG-VGRDNGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD~~-~~~~l~s~pI~~I~f~~-~g~~~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|...... +.......++..+.+.. .....++.|.|.....+.+ .+.|.|+..+. ..-.||+.
T Consensus 27 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r---~~~l~a~s~~e~~~Wi~ai~~ 98 (113)
T 1pls_A 27 VLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQ---DHFFQAAFLEERDAWVRDINK 98 (113)
T ss_dssp EEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTE---EEEEECSSHHHHHHHHHHHHH
T ss_pred EEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCC---EEEEECCCHHHHHHHHHHHHH
Confidence 5677778777754 34566667777666654 2233445566665544333 46699987655 44455543
No 64
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=22.50 E-value=1.8e+02 Score=19.98 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=36.7
Q ss_pred cccCC--ceEEEc-CCCCceeeeEeeEEEEEEeeCCC-----CCcceEEEEeeCCcceeEeEEEeecCchh--hHHHHHH
Q psy3532 2 DLDEG--ALKLTD-PENLTVLNTQPIHTIRVWGVGRD-----NGRDFAYVARDRSTRRHMCHVFRCDMPAR--TIANTLR 71 (242)
Q Consensus 2 ~~~~~--~l~lvD-~~~~~~l~s~pI~~I~f~~~g~~-----~~~~Fa~v~~d~~t~~~~CHVFrc~~~a~--~~a~Af~ 71 (242)
+|.++ .|...+ +.+.......++..+.+-.+... .++.|.|.....+.+. +.|.|+..+. ..-.||+
T Consensus 29 vL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~---~~l~a~s~~e~~~Wi~ai~ 105 (109)
T 2i5f_A 29 ILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVH---YFLQAATPKERTEWIKAIQ 105 (109)
T ss_dssp EEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCE---EEEECSSHHHHHHHHHHHH
T ss_pred EEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCE---EEEEcCCHHHHHHHHHHHH
Confidence 45554 677774 44455666777766555444332 1245666555443232 6688887655 4445554
Q ss_pred HH
Q psy3532 72 DI 73 (242)
Q Consensus 72 ~~ 73 (242)
.+
T Consensus 106 ~~ 107 (109)
T 2i5f_A 106 MA 107 (109)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 65
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=21.64 E-value=2.6e+02 Score=20.90 Aligned_cols=70 Identities=16% Similarity=0.266 Sum_probs=49.1
Q ss_pred eeeEEEEcCCeEEEEecCCCcCceeeeeEEEEEEEeeecCCCCceEEEEEe----CCCCceEEEEEEcCCCchHHHHHHH
Q psy3532 163 QDVNIAVAPSMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMH----TAQDLFIAHVFVTEPSSGALCKTIE 238 (242)
Q Consensus 163 ~pv~l~Vs~~~i~i~~~~~~~~~e~l~ec~vr~iSF~gvgkd~k~FafI~~----~~~~~f~CHVF~ce~~A~~lseaV~ 238 (242)
.+..|.+.+..|.+.+..+. ..++..-+++.|-=.|. |...|.|-+- +|...| .|.|. ++..|..+|+
T Consensus 21 G~~~L~l~~~~l~L~~~~~~--~~~l~~Wp~~~LRRyG~--~~~~FsFEaGRrC~tG~G~f---~F~~~-~~~~If~~v~ 92 (103)
T 1j0w_A 21 GECALQITYEYICLWDVQNP--RVKLISWPLSALRRYGR--DTTWFTFEAGRMCETGEGLF---IFQTR-DGEAIYQKVH 92 (103)
T ss_dssp EEEEEEECSSEEEEEESSST--TBEEEEEEGGGEEEEEE--CSSEEEEEECSSSSSCSEEE---EEECS-CHHHHHHHHH
T ss_pred ccEEEEECCCEEEEEecCCC--CcceEEeeHHHHhhcCc--cCCEEEEEeCCCCCCCCcEE---EEEcC-CHHHHHHHHH
Confidence 57899999999999876542 14566667776665555 4468999883 344443 45664 4789999998
Q ss_pred HH
Q psy3532 239 AA 240 (242)
Q Consensus 239 aA 240 (242)
+|
T Consensus 93 ~a 94 (103)
T 1j0w_A 93 SA 94 (103)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 66
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.50 E-value=2.1e+02 Score=19.85 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=40.6
Q ss_pred cccCCceEEEc-CCCCceeeeEeeEEEEEEeeCC--CCCcceEEEEeeCCc----ceeEeEEEeecCchh--hHHHHHHH
Q psy3532 2 DLDEGALKLTD-PENLTVLNTQPIHTIRVWGVGR--DNGRDFAYVARDRST----RRHMCHVFRCDMPAR--TIANTLRD 72 (242)
Q Consensus 2 ~~~~~~l~lvD-~~~~~~l~s~pI~~I~f~~~g~--~~~~~Fa~v~~d~~t----~~~~CHVFrc~~~a~--~~a~Af~~ 72 (242)
+|.++.|.... +.+.......++..+.+..... ..++.|.|.....+. ..-..+.|.|+..+. ..-.||+.
T Consensus 30 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~ 109 (118)
T 1v89_A 30 VLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRR 109 (118)
T ss_dssp EEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHH
T ss_pred EEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHH
Confidence 56777788874 4445567777777666655443 334456665543210 122346799987665 44455553
Done!