Your job contains 1 sequence.
>psy3532
MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCD
MPARTIANTLRDICKKIMIERSLQANQLAKPVLGGEGGRGGAVRPTNLPTERPQSFPTPM
EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTD
EETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAA
CK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3532
(242 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2QZC4 - symbol:APBB2 "Uncharacterized protein"... 529 6.5e-51 1
UNIPROTKB|I3LJX4 - symbol:APBB2 "Uncharacterized protein"... 525 2.4e-50 1
UNIPROTKB|Q92870 - symbol:APBB2 "Amyloid beta A4 precurso... 522 5.4e-50 1
UNIPROTKB|E2R1T9 - symbol:APBB2 "Uncharacterized protein"... 518 1.7e-49 1
UNIPROTKB|F1MDE6 - symbol:APBB2 "Uncharacterized protein"... 510 1.3e-48 1
UNIPROTKB|F1NND3 - symbol:APBB2 "Uncharacterized protein"... 503 3.7e-48 1
MGI|MGI:108405 - symbol:Apbb2 "amyloid beta (A4) precurso... 503 8.6e-48 1
RGD|1562438 - symbol:Apbb2 "amyloid beta (A4) precursor p... 498 1.2e-47 1
UNIPROTKB|Q17QV1 - symbol:APBB1 "Uncharacterized protein"... 477 3.8e-45 1
UNIPROTKB|F1RMN5 - symbol:APBB1 "Uncharacterized protein"... 472 1.5e-44 1
MGI|MGI:107765 - symbol:Apbb1 "amyloid beta (A4) precurso... 472 1.5e-44 1
RGD|2122 - symbol:Apbb1 "amyloid beta (A4) precursor prot... 472 1.5e-44 1
UNIPROTKB|O00213 - symbol:APBB1 "Amyloid beta A4 precurso... 463 1.6e-43 1
WB|WBGene00001410 - symbol:feh-1 species:6239 "Caenorhabd... 415 3.0e-38 1
UNIPROTKB|F1N3C4 - symbol:APBB3 "Uncharacterized protein"... 340 6.9e-31 1
UNIPROTKB|F1RGE6 - symbol:APBB3 "Uncharacterized protein"... 336 1.8e-30 1
UNIPROTKB|F1LPF8 - symbol:Apbb3 "Amyloid beta A4 precurso... 335 3.4e-30 1
RGD|620853 - symbol:Apbb3 "amyloid beta (A4) precursor pr... 334 4.6e-30 1
MGI|MGI:108404 - symbol:Apbb3 "amyloid beta (A4) precurso... 332 5.1e-30 1
UNIPROTKB|O95704 - symbol:APBB3 "Amyloid beta A4 precurso... 326 2.8e-29 1
UNIPROTKB|E1BVF0 - symbol:E1BVF0 "Uncharacterized protein... 307 2.2e-27 1
UNIPROTKB|D6RBA1 - symbol:APBB3 "Amyloid beta A4 precurso... 199 1.2e-15 1
UNIPROTKB|E7EX91 - symbol:APBB3 "Amyloid beta A4 precurso... 188 2.2e-14 1
UNIPROTKB|D6RD19 - symbol:APBB2 "Amyloid beta A4 precurso... 141 1.1e-09 1
UNIPROTKB|D6RAJ4 - symbol:APBB2 "Amyloid beta A4 precurso... 138 2.4e-09 1
UNIPROTKB|D6RGD4 - symbol:APBB2 "Amyloid beta A4 precurso... 127 4.7e-08 1
>UNIPROTKB|E2QZC4 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 ProteinModelPortal:E2QZC4
Ensembl:ENSCAFT00000025166 Uniprot:E2QZC4
Length = 739
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 116/241 (48%), Positives = 148/241 (61%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP 62
L+ L L DP + +VL++QPI +IRVWGVGRDNGRDFAYVARD+ TR CHVFRCD P
Sbjct: 455 LENDTLSLVDPMDRSVLHSQPIASIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTP 514
Query: 63 ARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPMEE 122
A+ IA +L +IC KIM ER A LA L NL FPTP E
Sbjct: 515 AKAIATSLHEICSKIMAERK-NAKALACSSLQERTN-------VNLDVPLQVDFPTPKTE 566
Query: 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS--TD 180
+ QYLG + V KP GMD LNNAI++L+++ Q W VN+ VA + +T+ S +
Sbjct: 567 LVQKFHVQYLGMLPVDKPVGMDTLNNAIESLMTSSNQEDWLSVNMNVADATVTVISEKNE 626
Query: 181 EETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAA 240
EET + ECRVRFLSF+G+G +V AFIM T F HVF EP++G + + ++AA
Sbjct: 627 EET----LVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAA 682
Query: 241 C 241
C
Sbjct: 683 C 683
>UNIPROTKB|I3LJX4 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0030308 "negative regulation
of cell growth" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 OMA:TKNSTPP EMBL:CU406976
EMBL:CU407111 Ensembl:ENSSSCT00000029046 Uniprot:I3LJX4
Length = 759
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 115/240 (47%), Positives = 147/240 (61%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP 62
L+ L L DP + +VL+ QPI +IRVWGVGRDNGRDFAYVARD+ TR CHVFRCD P
Sbjct: 475 LENDTLSLVDPMDHSVLHAQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTP 534
Query: 63 ARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPT-NLPTERPQSFPTPME 121
A+ IA +L +IC KIM ER A LA L RP NL FPTP
Sbjct: 535 AKAIATSLHEICSKIMAERK-NAKALACSSLQE--------RPAVNLDVPLQVDFPTPKT 585
Query: 122 EPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDE 181
E + R QYLG + V KP GMD LNNAI++L+++ + W VN+ VA + +T+ S
Sbjct: 586 ELVQKFRVQYLGMLPVDKPVGMDTLNNAIESLMTSSSKEDWPSVNMNVADATVTVISEKN 645
Query: 182 ETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAAC 241
E ++ ECRVRFLSF+G+G +V AFIM T F HVF EP++ + + ++AAC
Sbjct: 646 EE--EVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQHFECHVFWCEPNAANVSEAVQAAC 703
>UNIPROTKB|Q92870 [details] [associations]
symbol:APBB2 "Amyloid beta A4 precursor protein-binding
family B member 2" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0035556 "intracellular signal
transduction" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0007050 "cell cycle arrest" evidence=ISS] [GO:0045749 "negative
regulation of S phase of mitotic cell cycle" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0030426 "growth cone"
evidence=ISS] [GO:0030027 "lamellipodium" evidence=ISS] [GO:0045202
"synapse" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005634
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0043066
GO:GO:0016020 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0035556 GO:GO:0030198 GO:GO:0045202
GO:GO:0007050 GO:GO:0030027 GO:GO:0030426 GO:GO:0043065
GO:GO:0001540 GO:GO:0008134 eggNOG:NOG76544 HOGENOM:HOG000033983
HOVERGEN:HBG050524 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
EMBL:AK299800 EMBL:AK226179 EMBL:AC093804 EMBL:AC096712
EMBL:AC108937 EMBL:AC131953 EMBL:BC027946 EMBL:U62325
IPI:IPI00470455 IPI:IPI00470456 IPI:IPI00947448
RefSeq:NP_001159522.1 RefSeq:NP_001159523.1 RefSeq:NP_001159524.1
RefSeq:NP_001159525.1 RefSeq:NP_001159526.1 RefSeq:NP_775098.2
UniGene:Hs.479602 ProteinModelPortal:Q92870 SMR:Q92870
IntAct:Q92870 MINT:MINT-1493142 STRING:Q92870 PhosphoSite:Q92870
DMDM:52788291 PRIDE:Q92870 DNASU:323 Ensembl:ENST00000295974
Ensembl:ENST00000502841 Ensembl:ENST00000504305
Ensembl:ENST00000508593 Ensembl:ENST00000513140
Ensembl:ENST00000543538 GeneID:323 KEGG:hsa:323 UCSC:uc003gvl.3
UCSC:uc003gvm.3 CTD:323 GeneCards:GC04M040812 HGNC:HGNC:582
HPA:HPA023542 MIM:602710 neXtProt:NX_Q92870 PharmGKB:PA24874
InParanoid:Q92870 KO:K04530 OMA:TKNSTPP ChiTaRS:APBB2
GenomeRNAi:323 NextBio:1325 ArrayExpress:Q92870 Bgee:Q92870
CleanEx:HS_APBB2 Genevestigator:Q92870 GermOnline:ENSG00000163697
Uniprot:Q92870
Length = 758
Score = 522 (188.8 bits), Expect = 5.4e-50, P = 5.4e-50
Identities = 113/239 (47%), Positives = 146/239 (61%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCDMP 62
L+ L L DP + +VL++QPI +IRVWGVGRDNGRDFAYVARD+ TR CHVFRCD P
Sbjct: 474 LENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTP 533
Query: 63 ARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPMEE 122
A+ IA +L +IC KIM ER A LA L NL FPTP E
Sbjct: 534 AKAIATSLHEICSKIMAERK-NAKALACSSLQERAN-------VNLDVPLQVDFPTPKTE 585
Query: 123 PKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTDEE 182
+ QYLG + V KP GMDILN+AI+ L+++ + W VN+ VA + +T+ S E
Sbjct: 586 LVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTVISEKNE 645
Query: 183 TGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAAC 241
++ ECRVRFLSF+G+G +V AFIM T F HVF EP++G + + ++AAC
Sbjct: 646 E--EVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAAC 702
>UNIPROTKB|E2R1T9 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:TKNSTPP
EMBL:AAEX03002526 EMBL:AAEX03002527 EMBL:AAEX03002528
EMBL:AAEX03002529 ProteinModelPortal:E2R1T9
Ensembl:ENSCAFT00000036067 Uniprot:E2R1T9
Length = 762
Score = 518 (187.4 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 116/243 (47%), Positives = 148/243 (60%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFRCD 60
L+ L L DP + +VL++QPI +IRVWGVGRDNGR DFAYVARD+ TR CHVFRCD
Sbjct: 476 LENDTLSLVDPMDRSVLHSQPIASIRVWGVGRDNGREKDFAYVARDKDTRILKCHVFRCD 535
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
PA+ IA +L +IC KIM ER A LA L NL FPTP
Sbjct: 536 TPAKAIATSLHEICSKIMAERK-NAKALACSSLQERTN-------VNLDVPLQVDFPTPK 587
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS-- 178
E + QYLG + V KP GMD LNNAI++L+++ Q W VN+ VA + +T+ S
Sbjct: 588 TELVQKFHVQYLGMLPVDKPVGMDTLNNAIESLMTSSNQEDWLSVNMNVADATVTVISEK 647
Query: 179 TDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIE 238
+EET + ECRVRFLSF+G+G +V AFIM T F HVF EP++G + + ++
Sbjct: 648 NEEET----LVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQ 703
Query: 239 AAC 241
AAC
Sbjct: 704 AAC 706
>UNIPROTKB|F1MDE6 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0030308 "negative regulation
of cell growth" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 OMA:TKNSTPP EMBL:DAAA02017500
EMBL:DAAA02017494 EMBL:DAAA02017495 EMBL:DAAA02017496
EMBL:DAAA02017497 EMBL:DAAA02017498 EMBL:DAAA02017499
IPI:IPI00807314 Ensembl:ENSBTAT00000039647 Uniprot:F1MDE6
Length = 758
Score = 510 (184.6 bits), Expect = 1.3e-48, P = 1.3e-48
Identities = 113/241 (46%), Positives = 146/241 (60%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFRCD 60
L+ L L DP + +VL+ QPI +IRVWGVGRDNGR DFAYVARD+ TR CHVFRCD
Sbjct: 473 LENDTLSLVDPMDRSVLHAQPIVSIRVWGVGRDNGRHRDFAYVARDKDTRILKCHVFRCD 532
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
PA+ IA +L +IC KIM ER A LA L V P Q FPTP
Sbjct: 533 TPAKAIATSLHEICSKIMAERK-NAKALACSSLQERTHGNLDV-PL-------QDFPTPK 583
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTD 180
E + QYLG + V +P GMD LNNAI++L+++ + W VN+ VA + +T+ S
Sbjct: 584 TELVQKFHVQYLGMLPVDRPVGMDTLNNAIESLMTSSSKEEWPSVNMNVADATVTVISEK 643
Query: 181 EETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAA 240
E ++ ECRVRFLSF+G+G +V AFIM T F HVF EP++G + + ++AA
Sbjct: 644 NEE--EILVECRVRFLSFMGVGKDVHTFAFIMDTGNQHFECHVFWCEPNAGNVSEAVQAA 701
Query: 241 C 241
C
Sbjct: 702 C 702
>UNIPROTKB|F1NND3 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:TKNSTPP
EMBL:AADN02031228 IPI:IPI00823311 Ensembl:ENSGALT00000037427
ArrayExpress:F1NND3 Uniprot:F1NND3
Length = 686
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 112/241 (46%), Positives = 149/241 (61%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFRCD 60
L+ L L DP + TVL++QPI +IRVWGVGRDNGR DFAYVARD+ TR CHVFRCD
Sbjct: 400 LENDMLNLIDPMDRTVLHSQPIVSIRVWGVGRDNGRKIDFAYVARDKDTRILKCHVFRCD 459
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
PA+ IA +L +IC KIM ER N AK + V ++P + FPTP
Sbjct: 460 TPAKAIATSLHEICSKIMAERK---N--AKAMACSSMQERTNVT-LDVPLQ--VDFPTPK 511
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHSTD 180
E + QYLG + V+KP GMD LN+AI++L+++ + W V + VA + +T+ S
Sbjct: 512 TELVQKFHVQYLGMLPVAKPVGMDTLNSAIESLMASSSKEDWMPVTMNVADATVTVISER 571
Query: 181 EETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEAA 240
E +M ECRVRFLSF+G+G +V AFIM T F HVF EP++G + + ++AA
Sbjct: 572 NEE--EIMVECRVRFLSFMGVGKDVHTFAFIMDTGNQHFECHVFWCEPNAGNVSEAVQAA 629
Query: 241 C 241
C
Sbjct: 630 C 630
>MGI|MGI:108405 [details] [associations]
symbol:Apbb2 "amyloid beta (A4) precursor protein-binding,
family B, member 2" species:10090 "Mus musculus" [GO:0001764
"neuron migration" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=IDA] [GO:0007411 "axon guidance" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030048 "actin
filament-based movement" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=IGI] [GO:0030308 "negative regulation
of cell growth" evidence=IDA] [GO:0035035 "histone
acetyltransferase binding" evidence=NAS] [GO:0043065 "positive
regulation of apoptotic process" evidence=IDA] [GO:0043066
"negative regulation of apoptotic process" evidence=IGI]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=NAS]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 MGI:MGI:108405 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0050821
GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0030198 PDB:2ROZ PDB:2YSZ PDB:2YT0 PDB:2YT1 PDBsum:2ROZ
PDBsum:2YSZ PDBsum:2YT0 PDBsum:2YT1 GO:GO:0007050 GO:GO:0043065
GO:GO:0008134 eggNOG:NOG76544 HOGENOM:HOG000033983
HOVERGEN:HBG050524 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 GO:GO:0035035 GO:GO:0030048 CTD:323
KO:K04530 OMA:TKNSTPP ChiTaRS:APBB2 EMBL:AK004792 EMBL:BC076587
IPI:IPI00187397 IPI:IPI00471423 IPI:IPI00471424
RefSeq:NP_001188343.1 RefSeq:NP_001188344.1 RefSeq:NP_033816.1
UniGene:Mm.5159 PDB:1WGU PDBsum:1WGU ProteinModelPortal:Q9DBR4
SMR:Q9DBR4 IntAct:Q9DBR4 STRING:Q9DBR4 PhosphoSite:Q9DBR4
PaxDb:Q9DBR4 PRIDE:Q9DBR4 Ensembl:ENSMUST00000159786
Ensembl:ENSMUST00000160870 GeneID:11787 KEGG:mmu:11787
UCSC:uc008xox.2 UCSC:uc008xoz.2 InParanoid:Q9DBR4 OrthoDB:EOG43XV35
EvolutionaryTrace:Q9DBR4 NextBio:279605 Bgee:Q9DBR4
Genevestigator:Q9DBR4 GermOnline:ENSMUSG00000029207 Uniprot:Q9DBR4
Length = 760
Score = 503 (182.1 bits), Expect = 8.6e-48, P = 8.6e-48
Identities = 112/245 (45%), Positives = 148/245 (60%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFR 58
+ L+ L L DP + +VL++QPI IRVWGVGRDNGR DFAYVARD+ TR CHVFR
Sbjct: 472 LSLENDMLSLVDPMDRSVLHSQPIVNIRVWGVGRDNGRERDFAYVARDKDTRILKCHVFR 531
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQS--F 116
CD PA+ IA +L +IC KIM ER A LA L TN+ + P F
Sbjct: 532 CDTPAKAIATSLHEICSKIMAERK-NAKALACSSLQER---------TNMSLDVPLQVDF 581
Query: 117 PTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI 176
PTP E + R QYLG + V +P GMD LN+AI+ L+++ + W VN+ VA + +T+
Sbjct: 582 PTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTV 641
Query: 177 HSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
S E ++ ECRVRFLSF+G+G +V AFIM T F HVF EP++ + +
Sbjct: 642 ISEKNEE--EVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEA 699
Query: 237 IEAAC 241
++AAC
Sbjct: 700 VQAAC 704
>RGD|1562438 [details] [associations]
symbol:Apbb2 "amyloid beta (A4) precursor protein-binding,
family B, member 2" species:10116 "Rattus norvegicus" [GO:0001764
"neuron migration" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=ISO] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
RGD:1562438 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0043066 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050 GO:GO:0043065
GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 IPI:IPI00958587
Ensembl:ENSRNOT00000049214 ArrayExpress:F1M906 Uniprot:F1M906
Length = 638
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 110/243 (45%), Positives = 148/243 (60%)
Query: 3 LDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFRCD 60
L+ L L DP + +VL++QPI +IRVWGVGRDNGR DFAYVARD+ TR CHVFRCD
Sbjct: 352 LENDTLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRPRDFAYVARDKDTRILKCHVFRCD 411
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQS--FPT 118
PA+ IA +L +IC KIM ER A LA L TN+ + P FPT
Sbjct: 412 TPAKAIATSLHEICSKIMAERK-NAKALACSSLQER---------TNMSLDVPLQVDFPT 461
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
P E + QYLG + V +P GMD LN+AI+ L+++ + W VN+ VA + +T+
Sbjct: 462 PKTELVQKFHVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTV-- 519
Query: 179 TDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIE 238
+E+ ++ ECRVRFLSF+G+G +V AFIM T F HVF EP++ + + ++
Sbjct: 520 INEKNEEEILVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQ 579
Query: 239 AAC 241
AAC
Sbjct: 580 AAC 582
>UNIPROTKB|Q17QV1 [details] [associations]
symbol:APBB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0045944 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0007050 GO:GO:0003682 GO:GO:0030027
GO:GO:0030426 GO:GO:0043065 GO:GO:0001540 GO:GO:0006302 CTD:322
eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:EAPMDLG
OrthoDB:EOG4X3H12 EMBL:DAAA02040853 EMBL:DAAA02040854
EMBL:DAAA02040855 EMBL:DAAA02040856 EMBL:DAAA02040857 EMBL:BC118165
IPI:IPI00711662 RefSeq:NP_001068654.1 UniGene:Bt.37476 SMR:Q17QV1
STRING:Q17QV1 Ensembl:ENSBTAT00000020791 GeneID:505096
KEGG:bta:505096 InParanoid:Q17QV1 NextBio:20866980 Uniprot:Q17QV1
Length = 707
Score = 477 (173.0 bits), Expect = 3.8e-45, P = 3.8e-45
Identities = 99/242 (40%), Positives = 150/242 (61%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCD 60
+ L++ LKL +P + +L+TQPI +IRVWGVGRD+GRDFAYVARD+ T+ CHVFRC+
Sbjct: 423 LQLEDETLKLVEPHSQALLHTQPIVSIRVWGVGRDSGRDFAYVARDKLTQMLKCHVFRCE 482
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
PA+ IA +L +IC KIM ER A L + + ++P + FP P
Sbjct: 483 APAKNIATSLHEICSKIMAERR-NARCLVNGLSLDHS------KLVDVPFQ--VEFPAPK 533
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI-HST 179
E + + YLG++ V+KP G+D++N A+++++S+ + W +++VAP+ +TI H
Sbjct: 534 NELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILHQQ 593
Query: 180 DEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEA 239
E ++ ECRVRFLSFL +G +V AFIM F H+F EP++ +L + ++A
Sbjct: 594 TE----AVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAVQA 649
Query: 240 AC 241
AC
Sbjct: 650 AC 651
>UNIPROTKB|F1RMN5 [details] [associations]
symbol:APBB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0045944 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0007050 GO:GO:0003682 GO:GO:0030027
GO:GO:0030426 GO:GO:0043065 GO:GO:0001540 GO:GO:0006302 KO:K04529
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:EAPMDLG
EMBL:CU972372 RefSeq:XP_003357186.1 Ensembl:ENSSSCT00000015979
GeneID:100519163 KEGG:ssc:100519163 Uniprot:F1RMN5
Length = 709
Score = 472 (171.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 98/242 (40%), Positives = 149/242 (61%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCD 60
+ L++ LKL +P + +L+ QPI +IRVWGVGRD+GRDFAYVARD+ T+ CHVFRC+
Sbjct: 425 LQLEDETLKLVEPHSQALLHAQPIVSIRVWGVGRDSGRDFAYVARDKLTQMLKCHVFRCE 484
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
PA+ IA +L +IC KIM ER A L + + ++P + FP P
Sbjct: 485 APAKNIATSLHEICSKIMAERR-NARCLVNGLSLDHS------KLVDVPFQ--VEFPAPK 535
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI-HST 179
E + + YLG++ V+KP G+D++N A+++++S+ + W +++VAP+ +TI H
Sbjct: 536 NELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILHQQ 595
Query: 180 DEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTIEA 239
E ++ ECRVRFLSFL +G +V AFIM F H+F EP++ +L + ++A
Sbjct: 596 TE----AVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAVQA 651
Query: 240 AC 241
AC
Sbjct: 652 AC 653
>MGI|MGI:107765 [details] [associations]
symbol:Apbb1 "amyloid beta (A4) precursor protein-binding,
family B, member 1" species:10090 "Mus musculus" [GO:0001540
"beta-amyloid binding" evidence=ISO;IPI] [GO:0001764 "neuron
migration" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;IDA]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0008134 "transcription factor binding"
evidence=IDA] [GO:0008542 "visual learning" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=ISO] [GO:0030048 "actin filament-based movement"
evidence=NAS] [GO:0030198 "extracellular matrix organization"
evidence=IGI] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030426 "growth cone" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035035 "histone
acetyltransferase binding" evidence=NAS] [GO:0042393 "histone
binding" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043967 "histone H4
acetylation" evidence=ISO] [GO:0045202 "synapse" evidence=ISO]
[GO:0045211 "postsynaptic membrane" evidence=ISO] [GO:0045665
"negative regulation of neuron differentiation" evidence=IMP]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO;IMP]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050714 "positive regulation of protein secretion"
evidence=ISO] [GO:0050760 "negative regulation of thymidylate
synthase biosynthetic process" evidence=IDA] [GO:0050821 "protein
stabilization" evidence=NAS] [GO:0070064 "proline-rich region
binding" evidence=ISO] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 MGI:MGI:107765
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0043234
GO:GO:0050821 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0016607 GO:GO:0045211 GO:GO:0045944
GO:GO:0043197 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0042734 GO:GO:0050714 GO:GO:0007050
GO:GO:0006351 GO:GO:0003682 GO:GO:0030027 GO:GO:0030426
GO:GO:0043065 GO:GO:0001540 GO:GO:0043967 GO:GO:0010039
GO:GO:0006302 GO:GO:0008134 CTD:322 eggNOG:NOG76544
HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529 ChiTaRS:APBB1
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AF206720 EMBL:AK030748 EMBL:AK083830
EMBL:AK164140 EMBL:AC125227 EMBL:L77865 IPI:IPI00387261
IPI:IPI00626699 RefSeq:NP_001240814.1 RefSeq:NP_001240815.1
RefSeq:NP_033815.1 UniGene:Mm.38469 UniGene:Mm.490092
ProteinModelPortal:Q9QXJ1 SMR:Q9QXJ1 IntAct:Q9QXJ1 MINT:MINT-142893
STRING:Q9QXJ1 PhosphoSite:Q9QXJ1 PaxDb:Q9QXJ1 PRIDE:Q9QXJ1
Ensembl:ENSMUST00000081165 GeneID:11785 KEGG:mmu:11785
UCSC:uc009iyi.1 GeneTree:ENSGT00390000000002 InParanoid:Q9QXJ1
OMA:EAPMDLG OrthoDB:EOG4X3H12 NextBio:279601 Bgee:Q9QXJ1
Genevestigator:Q9QXJ1 GermOnline:ENSMUSG00000037032 GO:GO:0035035
GO:GO:0030048 Uniprot:Q9QXJ1
Length = 710
Score = 472 (171.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 100/244 (40%), Positives = 151/244 (61%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNG--RDFAYVARDRSTRRHMCHVFR 58
+ L++ LKL +P+N T+L+ QPI +IRVWGVGRD+G RDFAYVARD+ T+ CHVFR
Sbjct: 424 LQLEDETLKLVEPQNQTLLHAQPIVSIRVWGVGRDSGSNRDFAYVARDKLTQMLKCHVFR 483
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
C+ PA+ IA +L +IC KIM ER A L + + ++P + FP
Sbjct: 484 CEAPAKNIATSLHEICSKIMSERR-NARCLVNGLSLDHS------KLVDVPFQ--VEFPA 534
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI-H 177
P E + + YLG++ V+KP G+D++N A+++++S+ + W +++VAP+ +TI H
Sbjct: 535 PKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILH 594
Query: 178 STDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTI 237
E ++ ECRVRFLSFL +G +V AFIM F H+F EP++ +L + +
Sbjct: 595 QQTE----AVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAV 650
Query: 238 EAAC 241
+AAC
Sbjct: 651 QAAC 654
>RGD|2122 [details] [associations]
symbol:Apbb1 "amyloid beta (A4) precursor protein-binding, family
B, member 1 (Fe65)" species:10116 "Rattus norvegicus" [GO:0001540
"beta-amyloid binding" evidence=IEA;ISO;ISS;IPI] [GO:0001764 "neuron
migration" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO;IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007050 "cell cycle arrest" evidence=IEA;ISO;ISS]
[GO:0007411 "axon guidance" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=IEA;ISO;ISS] [GO:0008542
"visual learning" evidence=IEA;ISO] [GO:0010039 "response to iron
ion" evidence=IEP] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA;ISO;ISS] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0030308
"negative regulation of cell growth" evidence=IEA;ISO;ISS]
[GO:0030426 "growth cone" evidence=IEA;ISO;ISS;IDA] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO;ISS] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA;ISO;ISS] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045739 "positive regulation
of DNA repair" evidence=IEA;ISO;IMP] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0050714 "positive regulation of protein secretion" evidence=IMP]
[GO:0050760 "negative regulation of thymidylate synthase biosynthetic
process" evidence=IEA;ISO;ISS] [GO:0070064 "proline-rich region
binding" evidence=IEA;ISO] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 RGD:2122 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0043234 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0016607 GO:GO:0045211 GO:GO:0045944 GO:GO:0043197 GO:GO:0030198
GO:GO:0045665 GO:GO:0008542 GO:GO:0042734 GO:GO:0050714 GO:GO:0007050
GO:GO:0006351 GO:GO:0003682 GO:GO:0030027 GO:GO:0030426 GO:GO:0043065
GO:GO:0001540 GO:GO:0043967 GO:GO:0010039 GO:GO:0006302 GO:GO:0008134
CTD:322 eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524
KO:K04529 GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 OrthoDB:EOG4X3H12 EMBL:AF333983 EMBL:X60469
EMBL:X60468 IPI:IPI00188409 IPI:IPI00231515 PIR:S22571 PIR:S50818
RefSeq:NP_536726.1 UniGene:Rn.19953 ProteinModelPortal:P46933
SMR:P46933 DIP:DIP-682N DIP:DIP-852N IntAct:P46933 MINT:MINT-150919
STRING:P46933 PhosphoSite:P46933 PRIDE:P46933 GeneID:29722
KEGG:rno:29722 UCSC:RGD:2122 InParanoid:P46933 NextBio:610190
ArrayExpress:P46933 Genevestigator:P46933
GermOnline:ENSRNOG00000018020 Uniprot:P46933
Length = 711
Score = 472 (171.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 100/244 (40%), Positives = 151/244 (61%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFR 58
+ L++ LKL +P+N T+L+ QPI +IRVWGVGRD+GR DFAYVARD+ T+ CHVFR
Sbjct: 425 LQLEDETLKLVEPQNQTLLHAQPIVSIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFR 484
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
C+ PA+ IA +L +IC KIM ER A L + + ++P + FP
Sbjct: 485 CEAPAKNIATSLHEICSKIMSERR-NARCLVNGLSLDHS------KLVDVPFQ--VEFPA 535
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI-H 177
P E + + YLG++ V+KP G+D++N A+++++S+ + W +++VAP+ +TI H
Sbjct: 536 PKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILH 595
Query: 178 STDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTI 237
E ++ ECRVRFLSFL +G +V AFIM F H+F EP++ +L + +
Sbjct: 596 QQTE----AVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAV 651
Query: 238 EAAC 241
+AAC
Sbjct: 652 QAAC 655
>UNIPROTKB|O00213 [details] [associations]
symbol:APBB1 "Amyloid beta A4 precursor protein-binding
family B member 1" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=ISS] [GO:0007050 "cell cycle arrest"
evidence=ISS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=ISS] [GO:0030308 "negative regulation
of cell growth" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=NAS;IPI] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0030426 "growth cone" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0043065
"positive regulation of apoptotic process" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042393 "histone binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0043967 "histone H4 acetylation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0070064 "proline-rich region binding"
evidence=IPI] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007411
GO:GO:0001764 GO:GO:0007165 GO:GO:0045893 GO:GO:0043234
EMBL:CH471064 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0016607 GO:GO:0045211 GO:GO:0045944 GO:GO:0043197
GO:GO:0030198 GO:GO:0045665 GO:GO:0008542 PDB:3DXC PDB:3DXD
PDB:3DXE PDBsum:3DXC PDBsum:3DXD PDBsum:3DXE GO:GO:0045202
GO:GO:0042734 GO:GO:0050714 GO:GO:0007050 GO:GO:0006351
GO:GO:0003682 GO:GO:0006974 GO:GO:0030027 GO:GO:0030426
GO:GO:0043065 GO:GO:0001540 GO:GO:0043967 GO:GO:0010039
GO:GO:0007409 GO:GO:0006302 GO:GO:0008134 EMBL:L77864 EMBL:AF029234
EMBL:AF047835 EMBL:AK295241 EMBL:AC068733 EMBL:AC084337
EMBL:BC010854 IPI:IPI00010843 IPI:IPI00783577 RefSeq:NP_001155.1
RefSeq:NP_001244252.1 RefSeq:NP_001244254.1 RefSeq:NP_001244255.1
RefSeq:NP_663722.1 UniGene:Hs.372840 PDB:2E45 PDB:2HO2 PDB:2IDH
PDB:2OEI PDB:3D8D PDB:3D8E PDB:3D8F PDBsum:2E45 PDBsum:2HO2
PDBsum:2IDH PDBsum:2OEI PDBsum:3D8D PDBsum:3D8E PDBsum:3D8F
ProteinModelPortal:O00213 SMR:O00213 IntAct:O00213
MINT:MINT-1493266 STRING:O00213 PhosphoSite:O00213 PaxDb:O00213
PRIDE:O00213 DNASU:322 Ensembl:ENST00000299402
Ensembl:ENST00000311051 Ensembl:ENST00000530885 GeneID:322
KEGG:hsa:322 UCSC:uc001mdb.1 UCSC:uc001mdc.1 CTD:322
GeneCards:GC11M006414 H-InvDB:HIX0009398 HGNC:HGNC:581
HPA:CAB022104 MIM:602709 neXtProt:NX_O00213 PharmGKB:PA24873
eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529
ChiTaRS:APBB1 EvolutionaryTrace:O00213 GenomeRNAi:322 NextBio:1319
ArrayExpress:O00213 Bgee:O00213 CleanEx:HS_APBB1
Genevestigator:O00213 GermOnline:ENSG00000166313 GO:GO:0045749
GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10 SUPFAM:SSF51045
Uniprot:O00213
Length = 710
Score = 463 (168.0 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 98/244 (40%), Positives = 150/244 (61%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFR 58
+ L++ LKL +P++ +L+ QPI +IRVWGVGRD+GR DFAYVARD+ T+ CHVFR
Sbjct: 424 LQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFR 483
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
C+ PA+ IA +L +IC KIM ER A L + + ++P + FP
Sbjct: 484 CEAPAKNIATSLHEICSKIMAERR-NARCLVNGLSLDHS------KLVDVPFQ--VEFPA 534
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI-H 177
P E + + YLG++ V+KP G+D++N A+++++S+ + W +++VAP+ +TI H
Sbjct: 535 PKNELVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILH 594
Query: 178 STDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKTI 237
E ++ ECRVRFLSFL +G +V AFIM F H+F EP++ +L + +
Sbjct: 595 QQTE----AVLGECRVRFLSFLAVGRDVHTFAFIMAAGPASFCCHMFWCEPNAASLSEAV 650
Query: 238 EAAC 241
+AAC
Sbjct: 651 QAAC 654
>WB|WBGene00001410 [details] [associations]
symbol:feh-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0005884 "actin
filament" evidence=IDA] [GO:0001540 "beta-amyloid binding"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00640
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007631 GO:GO:0001540 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 EMBL:FO081806
UniGene:Cel.9305 GeneID:175373 KEGG:cel:CELE_Y54F10AM.2 CTD:175373
RefSeq:NP_497578.3 ProteinModelPortal:Q9BKZ9 SMR:Q9BKZ9
DIP:DIP-25952N STRING:Q9BKZ9 PRIDE:Q9BKZ9
EnsemblMetazoa:Y54F10AM.2a UCSC:Y54F10AM.2c.2 WormBase:Y54F10AM.2a
HOGENOM:HOG000019068 InParanoid:Q9BKZ9 OMA:TIMTEHR NextBio:887874
ArrayExpress:Q9BKZ9 Uniprot:Q9BKZ9
Length = 691
Score = 415 (151.1 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 83/176 (47%), Positives = 113/176 (64%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCD 60
M+LD+ L L DP+++ V++++ I IRVWGVGRDNGRDFAYV+RDR TRR MCHVFRCD
Sbjct: 434 MELDDNELALLDPDSMNVIHSERIQAIRVWGVGRDNGRDFAYVSRDRGTRRFMCHVFRCD 493
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
A+TIANTLRDICK++M+ R +P A+ R + P+
Sbjct: 494 TSAKTIANTLRDICKRLMLHR--------RP------SSLHAIESGEKRIVRSEGLTAPI 539
Query: 121 EEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITI 176
+EP+K++R +LG QV K G++ILN A+D LVS V W ++++APS I I
Sbjct: 540 DEPRKVIRCHFLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAPSTIAI 595
Score = 319 (117.4 bits), Expect = 9.0e-28, P = 9.0e-28
Identities = 62/131 (47%), Positives = 87/131 (66%)
Query: 112 RPQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAP 171
R + P++EP+K++R +LG QV K G++ILN A+D LVS V W ++++AP
Sbjct: 531 RSEGLTAPIDEPRKVIRCHFLGVTQVPKATGIEILNEAVDRLVSQVRSERWILADVSIAP 590
Query: 172 SMITIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSG 231
S I I E G +AECRVR+LSFLGIG +VK CAFIM T+ + F+ +VF EP++
Sbjct: 591 STIAI----VEVNGQQIAECRVRYLSFLGIGRDVKHCAFIMQTSSESFMCYVFHVEPNAA 646
Query: 232 ALCKTIEAACK 242
A+ K +EAACK
Sbjct: 647 AMAKMVEAACK 657
>UNIPROTKB|F1N3C4 [details] [associations]
symbol:APBB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:DAAA02020432 IPI:IPI00840216 UniGene:Bt.14642
Ensembl:ENSBTAT00000043198 ArrayExpress:F1N3C4 Uniprot:F1N3C4
Length = 486
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 80/245 (32%), Positives = 127/245 (51%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD--FAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GRD FA+VA D+ + CHVFR
Sbjct: 172 MILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVAGDKDSCMLKCHVFR 231
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L +C +I+ ER + P + P +LP R
Sbjct: 232 CDVPAKAIASALHGLCAQILSERVEVSGD--SPCCSLD-----PITPEDLP--RQVELLD 282
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A Y+G++ V+K GMD+LN AI TL + Q W ++V+ S++T H
Sbjct: 283 AVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTTRGDQDTWVPAMLSVSDSVMTAHP 342
Query: 179 TDEETGGTL--MAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E G + +C VR ++F+G+G + I F F +P +G L +
Sbjct: 343 IQAEAGAEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGHQSFQCAAFWCQPHAGGLSEA 402
Query: 237 IEAAC 241
++AAC
Sbjct: 403 VQAAC 407
>UNIPROTKB|F1RGE6 [details] [associations]
symbol:APBB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:CU459055 Ensembl:ENSSSCT00000015696 Uniprot:F1RGE6
Length = 485
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 79/245 (32%), Positives = 128/245 (52%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GR DFA+VA D+ + CHVFR
Sbjct: 171 MILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRARDFAFVAGDKDSCMLKCHVFR 230
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L +C +I+ ER + P + P +LP R
Sbjct: 231 CDVPAKAIASALHGLCAQILSERVGVSGD--SPCCSLD-----PISPEDLP--RQVELLD 281
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A ++G++ V+K GMD+LN AI TL + + W ++V+ S++T H
Sbjct: 282 AVSQAAQKYEALFMGTLPVTKAMGMDVLNEAIGTLTTRGDRDAWVPAMLSVSDSLMTAHP 341
Query: 179 TDEETGGTL--MAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E G + EC VR ++F+G+G + I + F F +P +G L +
Sbjct: 342 IQAEAGAEEEPLWECPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEA 401
Query: 237 IEAAC 241
++AAC
Sbjct: 402 VQAAC 406
>UNIPROTKB|F1LPF8 [details] [associations]
symbol:Apbb3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 RGD:620853 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
IPI:IPI00213067 Ensembl:ENSRNOT00000024313 ArrayExpress:F1LPF8
Uniprot:F1LPF8
Length = 504
Score = 335 (123.0 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 79/245 (32%), Positives = 127/245 (51%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGR--DFAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GR DFA+VA D+ + CHVFR
Sbjct: 170 MVLKKDAMSLLNPLDHSLIHCQPLVHIRVWGVGSSKGRARDFAFVAGDKDSCMLKCHVFR 229
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L+ +C +I+ ER + + A + P + P R
Sbjct: 230 CDVPAKAIASALQGLCAQILSERVGLSGEAA-------CCSPDPISPEDFP--RQVELLD 280
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A Y+G + V+K GMD+LN AI TL + W ++V+ S++T H
Sbjct: 281 AVSQAAQKYEALYMGILPVTKAMGMDVLNEAIGTLTGRGDRKTWVPAMLSVSDSLMTAHP 340
Query: 179 TDEETGGTL--MAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E G + +C VR ++F+G+GH+ I F F +P +G L +
Sbjct: 341 IQAEAGAEEEPLWQCPVRLVTFIGVGHDPHTFGLIADLGCQSFQCAAFWCQPHAGGLSEA 400
Query: 237 IEAAC 241
++AAC
Sbjct: 401 VQAAC 405
>RGD|620853 [details] [associations]
symbol:Apbb3 "amyloid beta (A4) precursor protein-binding, family
B, member 3" species:10116 "Rattus norvegicus" [GO:0001540
"beta-amyloid binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0015629
"actin cytoskeleton" evidence=IEA;ISO] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
RGD:620853 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015629 GO:GO:0001540 HOGENOM:HOG000033983 HOVERGEN:HBG050524
Gene3D:2.20.70.10 SUPFAM:SSF51045 CTD:10307 eggNOG:NOG80991
EMBL:Y13413 IPI:IPI00213067 RefSeq:NP_446409.1 UniGene:Rn.30067
ProteinModelPortal:O35827 SMR:O35827 IntAct:O35827 STRING:O35827
PRIDE:O35827 GeneID:117026 KEGG:rno:117026 UCSC:RGD:620853
InParanoid:O35827 NextBio:619797 ArrayExpress:O35827
Genevestigator:O35827 GermOnline:ENSRNOG00000017849 Uniprot:O35827
Length = 504
Score = 334 (122.6 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 79/245 (32%), Positives = 127/245 (51%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD--FAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GRD FA+VA D+ + CHVFR
Sbjct: 170 MVLKKDAMSLLNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVAGDKDSCMLKCHVFR 229
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L+ +C +I+ ER + + A + P + P R
Sbjct: 230 CDVPAKAIASRLQGLCAQILSERVGLSGEAA-------CCSPDPISPEDFP--RQVELLD 280
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A Y+G + V+K GMD+LN AI TL + W ++V+ S++T H
Sbjct: 281 AVSQAAQKYEALYMGILPVTKAMGMDVLNEAIGTLTGRGDRKTWVPAMLSVSDSLMTAHP 340
Query: 179 TDEETGGTL--MAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E G + +C VR ++F+G+GH+ I F F +P +G L +
Sbjct: 341 IQAEAGAEEEPLWQCPVRLVTFIGVGHDPHTFGLIADLGCQSFQCAAFWCQPHAGGLSEA 400
Query: 237 IEAAC 241
++AAC
Sbjct: 401 VQAAC 405
>MGI|MGI:108404 [details] [associations]
symbol:Apbb3 "amyloid beta (A4) precursor protein-binding,
family B, member 3" species:10090 "Mus musculus" [GO:0001540
"beta-amyloid binding" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=TAS] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
MGI:MGI:108404 GO:GO:0005737 GO:GO:0043066 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 GO:GO:0001540 HOGENOM:HOG000033983
HOVERGEN:HBG050524 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 CTD:10307 eggNOG:NOG80991 OMA:CQPHAGG
EMBL:BC024809 IPI:IPI00153349 RefSeq:NP_666197.1 UniGene:Mm.89673
ProteinModelPortal:Q8R1C9 SMR:Q8R1C9 IntAct:Q8R1C9 STRING:Q8R1C9
PhosphoSite:Q8R1C9 PRIDE:Q8R1C9 Ensembl:ENSMUST00000001415
GeneID:225372 KEGG:mmu:225372 InParanoid:Q8R1C9 OrthoDB:EOG4RJG1S
NextBio:377647 Bgee:Q8R1C9 Genevestigator:Q8R1C9
GermOnline:ENSMUSG00000001379 Uniprot:Q8R1C9
Length = 486
Score = 332 (121.9 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 79/245 (32%), Positives = 128/245 (52%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD--FAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GRD FA+VA D+ + CHVF
Sbjct: 172 MILKKDAMSLLNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVAGDKDSCMLKCHVFH 231
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L+ +C +I+ ER + + A + P +LP R
Sbjct: 232 CDVPAKAIASALQGLCAQILSERVGVSGEAA-------CCSPDPISPEDLP--RQVELLD 282
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A Y+G + V+K GMD+LN AI TL + + W ++V+ S++T H+
Sbjct: 283 AVSQAAQKYEALYMGILPVTKAMGMDVLNEAIGTLTARGDRKTWVPAMLSVSDSLMTAHA 342
Query: 179 TDEETGGTL--MAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E G + +C VR ++F+G+G + I F F EP +G L +
Sbjct: 343 IQAEAGAEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGCQSFQCAAFWCEPHAGGLSEA 402
Query: 237 IEAAC 241
++AAC
Sbjct: 403 VQAAC 407
>UNIPROTKB|O95704 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 EMBL:CH471062
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629 GO:GO:0001540
EMBL:AC011399 HOGENOM:HOG000033983 HOVERGEN:HBG050524
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AB018247 EMBL:AB024745
EMBL:AF224708 EMBL:AF224709 EMBL:AF224710 EMBL:AF224711
EMBL:AK075280 EMBL:BC125187 IPI:IPI00032785 IPI:IPI00218293
IPI:IPI00218294 IPI:IPI00218296 RefSeq:NP_006042.3
RefSeq:NP_573418.2 RefSeq:NP_573419.2 RefSeq:NP_573420.2
UniGene:Hs.529449 PDB:2DYQ PDB:2YSC PDBsum:2DYQ PDBsum:2YSC
ProteinModelPortal:O95704 SMR:O95704 IntAct:O95704
MINT:MINT-1493083 STRING:O95704 PhosphoSite:O95704 PaxDb:O95704
PRIDE:O95704 Ensembl:ENST00000354402 Ensembl:ENST00000356738
Ensembl:ENST00000357560 Ensembl:ENST00000412920 GeneID:10307
KEGG:hsa:10307 UCSC:uc003lgb.1 UCSC:uc003lgd.1 UCSC:uc003lge.1
UCSC:uc021yeg.1 CTD:10307 GeneCards:GC05M139937 HGNC:HGNC:20708
HPA:HPA005571 MIM:602711 neXtProt:NX_O95704 PharmGKB:PA134958636
eggNOG:NOG80991 OMA:CQPHAGG ChiTaRS:APBB3 EvolutionaryTrace:O95704
GenomeRNAi:10307 NextBio:39057 ArrayExpress:O95704 Bgee:O95704
CleanEx:HS_APBB3 Genevestigator:O95704 GermOnline:ENSG00000113108
Uniprot:O95704
Length = 486
Score = 326 (119.8 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 78/245 (31%), Positives = 130/245 (53%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD--FAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GRD FA+VA D+ + CHVF
Sbjct: 172 MILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFC 231
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L +C +I+ ER ++ + A + P +LP R
Sbjct: 232 CDVPAKAIASALHGLCAQILSER-VEVSGDASCC------SPDPISPEDLP--RQVELLD 282
Query: 119 PMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMITIHS 178
+ + + A Y+G++ V+K GMD+LN AI TL + ++ W ++V+ S++T H
Sbjct: 283 AVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHP 342
Query: 179 TDEE--TGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSGALCKT 236
E T + +C VR ++F+G+G + I + F F +P +G L +
Sbjct: 343 IQAEASTEEEPLWQCPVRLVTFIGVGRDPHTFGLIADLGRQSFQCAAFWCQPHAGGLSEA 402
Query: 237 IEAAC 241
++AAC
Sbjct: 403 VQAAC 407
>UNIPROTKB|E1BVF0 [details] [associations]
symbol:E1BVF0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:AADN02063699 IPI:IPI00573148
ProteinModelPortal:E1BVF0 Ensembl:ENSGALT00000001704 Uniprot:E1BVF0
Length = 399
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 79/237 (33%), Positives = 121/237 (51%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNG------RDFAYVARDRSTRRHMC 54
M L + + L DP + ++++ QPI IRVWGVG + G RDFA+VA D+ T C
Sbjct: 171 MILKKDTMSLVDPLDHSLIHCQPILNIRVWGVGCNKGSPPRPRRDFAFVASDKDTCVLKC 230
Query: 55 HVFRCDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQ 114
HVFRC++PA+ IA L +C +I+ ER+ A P A P L T Q
Sbjct: 231 HVFRCNVPAKGIAKALHGMCSQIVAERAA-AGSGPSPHSAALEPISAATWP--LRTADVQ 287
Query: 115 SFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVNIAVAPSMI 174
+ P + A Y+GS V + GMD+LN AI+ L++ ++ W ++ V+ + +
Sbjct: 288 D---AVGRPPRRYEALYIGSRPVPRAMGMDVLNAAIEQLLAGPGRNSWTPAHVCVSDTAV 344
Query: 175 TIHSTDEETGGTLMAECRVRFLSFLGIGHNVKQCAFIMHTAQDLFIAHVFVTEPSSG 231
+ EE + +C VR+++FLG+G + A I T + F F EP +G
Sbjct: 345 RVRRAQEEDEAHVW-QCEVRYVTFLGVGRDAHTFALIADTGRR-FQCAAFWCEPDAG 399
>UNIPROTKB|D6RBA1 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 EMBL:AC011399 HOGENOM:HOG000033983
Gene3D:2.20.70.10 SUPFAM:SSF51045 HGNC:HGNC:20708 ChiTaRS:APBB3
EMBL:AC116353 IPI:IPI01013617 ProteinModelPortal:D6RBA1 SMR:D6RBA1
Ensembl:ENST00000511201 ArrayExpress:D6RBA1 Bgee:D6RBA1
Uniprot:D6RBA1
Length = 337
Score = 199 (75.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 48/142 (33%), Positives = 78/142 (54%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRDFAYVARDRSTRRHMCHVFRCD 60
M L + A+ L +P + ++++ QP+ IRVWGVG GRDFA+VA D+ + CHVF CD
Sbjct: 172 MILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRDFAFVASDKDSCMLKCHVFCCD 231
Query: 61 MPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPTPM 120
+PA+ IA+ L +C +I+ ER ++ + A + P +LP R +
Sbjct: 232 VPAKAIASALHGLCAQILSER-VEVSGDASCC------SPDPISPEDLP--RQVELLDAV 282
Query: 121 EEPKKILRAQYLGSIQVSKPGG 142
+ + A Y+G++ V+K G
Sbjct: 283 SQAAQKYEALYMGTLPVTKAMG 304
>UNIPROTKB|E7EX91 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 EMBL:AC011399 Gene3D:2.20.70.10
SUPFAM:SSF51045 HGNC:HGNC:20708 ChiTaRS:APBB3 EMBL:AC116353
IPI:IPI00967914 ProteinModelPortal:E7EX91 SMR:E7EX91
Ensembl:ENST00000358580 ArrayExpress:E7EX91 Bgee:E7EX91
Uniprot:E7EX91
Length = 339
Score = 188 (71.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 48/144 (33%), Positives = 78/144 (54%)
Query: 1 MDLDEGALKLTDPENLTVLNTQPIHTIRVWGVGRDNGRD--FAYVARDRSTRRHMCHVFR 58
M L + A+ L +P + ++++ QP+ IRVWGVG GRD FA+VA D+ + CHVF
Sbjct: 172 MILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRDRDFAFVASDKDSCMLKCHVFC 231
Query: 59 CDMPARTIANTLRDICKKIMIERSLQANQLAKPVLXXXXXXXXAVRPTNLPTERPQSFPT 118
CD+PA+ IA+ L +C +I+ ER ++ + A + P +LP R
Sbjct: 232 CDVPAKAIASALHGLCAQILSER-VEVSGDASCC------SPDPISPEDLP--RQVELLD 282
Query: 119 PMEEPKKILRAQYLGSIQVSKPGG 142
+ + + A Y+G++ V+K G
Sbjct: 283 AVSQAAQKYEALYMGTLPVTKAMG 306
>UNIPROTKB|D6RD19 [details] [associations]
symbol:APBB2 "Amyloid beta A4 precursor protein-binding
family B member 2" species:9606 "Homo sapiens" [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045749 "negative regulation of S phase
of mitotic cell cycle" evidence=IEA] InterPro:IPR006020
Pfam:PF00640 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 HOGENOM:HOG000033983 GO:GO:0045749 EMBL:AC093804
EMBL:AC096712 EMBL:AC108937 EMBL:AC131953 HGNC:HGNC:582
ChiTaRS:APBB2 IPI:IPI00965110 ProteinModelPortal:D6RD19 SMR:D6RD19
Ensembl:ENST00000510670 ArrayExpress:D6RD19 Bgee:D6RD19
Uniprot:D6RD19
Length = 102
Score = 141 (54.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 107 NLPTERPQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVN 166
NL FPTP E + QYLG + V KP GMDILN+AI+ L+++ + W VN
Sbjct: 22 NLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVN 81
Query: 167 IAVAPSMITIHSTDEE 182
+ VA + +T+ S E
Sbjct: 82 MNVADATVTVISEKNE 97
>UNIPROTKB|D6RAJ4 [details] [associations]
symbol:APBB2 "Amyloid beta A4 precursor protein-binding
family B member 2" species:9606 "Homo sapiens" [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045749 "negative regulation of S phase
of mitotic cell cycle" evidence=IEA] InterPro:IPR006020
Pfam:PF00640 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 EMBL:AC093804 EMBL:AC096712
EMBL:AC108937 EMBL:AC131953 HGNC:HGNC:582 ChiTaRS:APBB2
IPI:IPI00967642 ProteinModelPortal:D6RAJ4 SMR:D6RAJ4
Ensembl:ENST00000514920 ArrayExpress:D6RAJ4 Bgee:D6RAJ4
Uniprot:D6RAJ4
Length = 95
Score = 138 (53.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 107 NLPTERPQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVN 166
NL FPTP E + QYLG + V KP GMDILN+AI+ L+++ + W VN
Sbjct: 22 NLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVN 81
Query: 167 IAVAPSMITIHS 178
+ VA + +T+ S
Sbjct: 82 MNVADATVTVIS 93
>UNIPROTKB|D6RGD4 [details] [associations]
symbol:APBB2 "Amyloid beta A4 precursor protein-binding
family B member 2" species:9606 "Homo sapiens" [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045749 "negative regulation of S phase
of mitotic cell cycle" evidence=IEA] InterPro:IPR006020
Pfam:PF00640 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 EMBL:AC093804 EMBL:AC096712
EMBL:AC108937 EMBL:AC131953 HGNC:HGNC:582 ChiTaRS:APBB2
IPI:IPI00964939 ProteinModelPortal:D6RGD4 SMR:D6RGD4
Ensembl:ENST00000513516 ArrayExpress:D6RGD4 Bgee:D6RGD4
Uniprot:D6RGD4
Length = 87
Score = 127 (49.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 107 NLPTERPQSFPTPMEEPKKILRAQYLGSIQVSKPGGMDILNNAIDTLVSTVPQHLWQDVN 166
NL FPTP E + QYLG + V KP GMDILN+AI+ L+++ + W VN
Sbjct: 22 NLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVN 81
Query: 167 IAVA 170
+ VA
Sbjct: 82 MNVA 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 242 234 0.00087 113 3 11 22 0.37 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 603 (64 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.18u 0.08s 19.26t Elapsed: 00:00:23
Total cpu time: 19.18u 0.08s 19.26t Elapsed: 00:00:24
Start: Thu Aug 15 13:53:17 2013 End: Thu Aug 15 13:53:41 2013