BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3534
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95704|APBB3_HUMAN Amyloid beta A4 precursor protein-binding family B member 3 OS=Homo
sapiens GN=APBB3 PE=1 SV=2
Length = 486
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 78/186 (41%), Gaps = 55/186 (29%)
Query: 84 SVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNE-PKTPLVKDAETVNND 142
S+E E LPPGW + D G YYWH+ SG+ Q P + G E P T
Sbjct: 24 SLEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPTWELGDAEDPGT------------ 71
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDL 202
GT E +G PK G S +S+ S + RSN+ S
Sbjct: 72 ---------GT------EGIWGLRPPK----------GRSFSSLESSLDRSNSLS----- 101
Query: 203 DGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVD 262
+ SY E K FAVRSLGWVE+ E DL P +SS AVN CI
Sbjct: 102 --------WYGGESYIQSMEPGAK----CFAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQ 149
Query: 263 LSLGRN 268
L+ R+
Sbjct: 150 LAQTRS 155
>sp|Q9DBR4|APBB2_MOUSE Amyloid beta A4 precursor protein-binding family B member 2 OS=Mus
musculus GN=Apbb2 PE=1 SV=2
Length = 760
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 86/196 (43%), Gaps = 36/196 (18%)
Query: 84 SVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDG 143
S + + LPPGW+R D G YYWHI +GT Q + P
Sbjct: 285 SFQTDPDLPPGWKRVNDIAGTYYWHIPTGTTQWERPVSI--------------------- 323
Query: 144 PYYWH-IKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVL---SMVTRSNTSSAL 199
P H + G++ P T +NE K P A NG NS + N +L
Sbjct: 324 PADLHGSRKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSL 381
Query: 200 EDLDGKRKEDLAFKRRSYP-------ARAESDTKDKLIRFAVRSLGWVEISEHDLTPERS 252
++ +G + K R+ P SD + K FAVRSLGWVE++E DL P +S
Sbjct: 382 KEFEGATLRYASLKLRNAPHGDDDDSCSINSDPEAKC--FAVRSLGWVEMAEEDLAPGKS 439
Query: 253 SKAVNKCIVDLSLGRN 268
S AVN CI LS +N
Sbjct: 440 SVAVNNCIRQLSYCKN 455
>sp|Q9QXJ1|APBB1_MOUSE Amyloid beta A4 precursor protein-binding family B member 1 OS=Mus
musculus GN=Apbb1 PE=1 SV=3
Length = 710
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 83 SSVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNND 142
++ E + LP GW R +D G YYWHI +GT Q +PP G+ P + +
Sbjct: 247 NAFETDSDLPAGWMRVQDTSGTYYWHIPTGTTQWEPP----GRASP-----SQGSSPQEE 297
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEP--KTPL---VKDAETNGSSSNSVLSMVTRSNTSS 197
W Q E + K+EP + P+ +KD E T S +
Sbjct: 298 SQLTW--TGFAHQEGFEEGEFWKDEPSEEAPMELGLKDPEE-----------ATLSFPAQ 344
Query: 198 ALEDLDGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVN 257
+L ++E+ +R + P + FAVRSLGWVE++E +L P RSS AVN
Sbjct: 345 SLSPEPVPQEEEKLSQRNANPG---------IKCFAVRSLGWVEMTEEELAPGRSSVAVN 395
Query: 258 KCIVDLSLGRNH 269
CI LS +N+
Sbjct: 396 NCIRQLSYHKNN 407
>sp|O35827|APBB3_RAT Amyloid beta A4 precursor protein-binding family B member 3
OS=Rattus norvegicus GN=Apbb3 PE=2 SV=1
Length = 504
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 77/185 (41%), Gaps = 55/185 (29%)
Query: 84 SVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDG 143
++E E LPPGW + D G YYWH+ SG+ Q P + ++ P T
Sbjct: 24 NLEGETGLPPGWRKIRDAAGTYYWHVPSGSTQWQRPTWELAED-PGTG------------ 70
Query: 144 PYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDLD 203
K G + PP+ G S +S+ S + RSN+ +
Sbjct: 71 ------KEGIWELRPPK-------------------GRSFSSLDSSLNRSNSLT------ 99
Query: 204 GKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVDL 263
+ SY E K FAVRSLGWVE+ E DL P +SS AVN CI L
Sbjct: 100 -------WYNEDSYVRSLEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQL 148
Query: 264 SLGRN 268
+ RN
Sbjct: 149 AQARN 153
>sp|Q8R1C9|APBB3_MOUSE Amyloid beta A4 precursor protein-binding family B member 3 OS=Mus
musculus GN=Apbb3 PE=2 SV=1
Length = 486
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 75/185 (40%), Gaps = 53/185 (28%)
Query: 84 SVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDG 143
++E E LPPGW + D G YYWH+ SG+ Q P + E
Sbjct: 24 NLEGETGLPPGWRKIRDAAGTYYWHVPSGSTQWQRPTWELPGAE---------------- 67
Query: 144 PYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDLD 203
DP T G E + P G S +S+ S + RSN+ +
Sbjct: 68 -------------DPGRGTEGIWELRPP-------KGRSFSSLDSSLNRSNSLT------ 101
Query: 204 GKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVDL 263
+ SY E K FAVRSLGWVE+ E DL P +SS AVN CI L
Sbjct: 102 -------WYSEDSYVRSLEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQL 150
Query: 264 SLGRN 268
+ RN
Sbjct: 151 AQTRN 155
>sp|Q92870|APBB2_HUMAN Amyloid beta A4 precursor protein-binding family B member 2 OS=Homo
sapiens GN=APBB2 PE=1 SV=3
Length = 758
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 89/195 (45%), Gaps = 34/195 (17%)
Query: 84 SVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDG 143
S + + LPPGW+R D G YYWHI +GT Q + P + D +
Sbjct: 285 SFQTDPDLPPGWKRVSDIAGTYYWHIPTGTTQWERP----------VSIPADLQGS---- 330
Query: 144 PYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSS---ALE 200
+ G++ P T +NE K P A NG NS + + T + +L+
Sbjct: 331 ------RKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLK 382
Query: 201 DLDGKRKEDLAFKRRSYP-------ARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSS 253
+ +G + K R+ P SD + K FAVRSLGWVE++E DL P +SS
Sbjct: 383 EFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKC--FAVRSLGWVEMAEEDLAPGKSS 440
Query: 254 KAVNKCIVDLSLGRN 268
AVN CI LS +N
Sbjct: 441 VAVNNCIRQLSYCKN 455
>sp|P46933|APBB1_RAT Amyloid beta A4 precursor protein-binding family B member 1
OS=Rattus norvegicus GN=Apbb1 PE=1 SV=3
Length = 711
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 83 SSVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNND 142
++ E + LP GW R +D G YYWHI +GT Q +PP G+ P + +
Sbjct: 248 NAFETDSDLPAGWMRVQDTSGTYYWHIPTGTTQWEPP----GRASP-----SQGNSPQEE 298
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEP--KTPL---VKDAETNGSSSNSVLSMVTRSNTSS 197
W Q E + K+EP + P+ +KD E T ++
Sbjct: 299 SQLTW--TGFAHQEGFEEGEFWKDEPSEEAPMELGLKDPEEG-----------TLPFSAQ 345
Query: 198 ALEDLDGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVN 257
+L ++E+ +R + P + FAVRSLGWVE++E +L P RSS AVN
Sbjct: 346 SLSPEPVPQEEENLPQRNANPG---------IKCFAVRSLGWVEMTEEELAPGRSSVAVN 396
Query: 258 KCIVDLSLGRNH 269
CI LS +N+
Sbjct: 397 NCIRQLSYHKNN 408
>sp|O00213|APBB1_HUMAN Amyloid beta A4 precursor protein-binding family B member 1 OS=Homo
sapiens GN=APBB1 PE=1 SV=2
Length = 710
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 40/157 (25%)
Query: 140 NNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMV-TRSNTSSA 198
+ G YYWHI +GT Q +PP G+ P + GSS + T
Sbjct: 264 DTSGTYYWHIPTGTTQWEPP----GRASP---------SQGSSPQEESQLTWTGFAHGEG 310
Query: 199 LEDLDGKRKE-------DLAFKR-----RSYPARAES--------------DTKDKLIRF 232
ED + + E +L K ++PA++ S +T + F
Sbjct: 311 FEDGEFWKDEPSDEAPMELGLKEPEEGTLTFPAQSLSPEPLPQEEEKLPPRNTNPGIKCF 370
Query: 233 AVRSLGWVEISEHDLTPERSSKAVNKCIVDLSLGRNH 269
AVRSLGWVE++E +L P RSS AVN CI LS +N+
Sbjct: 371 AVRSLGWVEMTEEELAPGRSSVAVNNCIRQLSYHKNN 407
>sp|Q0CCL1|RSP5_ASPTN Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=hulA PE=3 SV=1
Length = 808
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 57 VPVKLRGASPLPPLLADLSPSLSST-LSSVE-AEEQLPPGWERHEDNDGPYYW 107
VP R +S + P+ +P S T LSS E ++ +LP GWER EDN G Y+
Sbjct: 189 VPSTTRPSSTVAPVNGAAAPGASRTNLSSFEDSQGRLPAGWERREDNLGRTYY 241
>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2
SV=2
Length = 414
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 82 LSSVEAEEQLPPGWERHEDNDGPYYW--HIKSGTIQRDPPEFTYGKNEPKTPLVKDAETV 139
L ++EE+LPPGWE DG Y+ H++ T P + P + ET
Sbjct: 9 LEDTDSEEELPPGWEERTTKDGWVYYANHLEEKTQWEHPKSGKRKRVAGGLPYGWEQETD 68
Query: 140 NNDGPYYW-HIKSGTIQRDPP-EFTYGKNEPKTPLVKDAETNGSS 182
N Y+ HI T DP FT N K P + + N ++
Sbjct: 69 ENGQVYFVDHINKRTTYLDPRLAFTVEDNPAKPPTRQKYDGNSTA 113
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Query: 136 AETVNNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPL--VKDAETNGSSSNSVLSM 189
E VN++ PYY +KSGTI + P P TP+ V+ + +G+S+N+++S
Sbjct: 402 VEDVNDNIPYYTEVKSGTILENEP--------PGTPVMQVRAFDMDGTSANNIVSF 449
>sp|P13888|POLN_RRVT Non-structural polyprotein (Fragment) OS=Ross river virus (strain
T48) PE=2 SV=1
Length = 1148
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 5 VPSPDIYQRSATYYEKPTP-PRTLSLSEKASCTPAQGASIPHVPGDLNNDLYAVPVKLRG 63
VP+P I QR++TY PTP PR L S S T + G P P DL V K+R
Sbjct: 440 VPAPRI-QRASTYRVSPTPTPRVLRAS-VCSVTTSAGVEFPWAPEDLEVLTEPVHCKMRE 497
Query: 64 ASPLP 68
LP
Sbjct: 498 PVELP 502
>sp|Q6CNR4|VPS10_KLULA Vacuolar protein sorting/targeting protein 10 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=VPS10 PE=3 SV=1
Length = 1566
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 15 ATYYEKPTPPRTLSLSEKASCTPAQGASIPHVPGDLNNDLYAVPVKLRGASPLPPLLADL 74
++ +K + + L +K C Q +++ GD+++ LY V + SP L DL
Sbjct: 210 CSFVQKSSKSKLYKLKDKVIC---QESTVLSPFGDVSSKLYITDVNFKSLSPFAEQLQDL 266
Query: 75 SPS---------LSSTLSSVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQR 116
SP+ TLS E W R ED+ + I GT R
Sbjct: 267 SPASTFISDNHLFILTLSDRFNENSAANLW-RLEDDSTDKFEQISLGTQIR 316
>sp|P13887|POLN_RRVN Non-structural polyprotein OS=Ross river virus (strain NB5092) PE=2
SV=1
Length = 2479
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 5 VPSPDIYQRSATYYEKPTP-PRTLSLSEKASCTPAQGASIPHVPGDLNNDLYAVPVKLRG 63
VP+P I QR++TY PTP PR L S S T + G P P DL V ++R
Sbjct: 1771 VPAPRI-QRASTYRVSPTPTPRVLRAS-VCSVTTSAGVEFPWAPEDLEVLTEPVHCEMRE 1828
Query: 64 ASPLP 68
LP
Sbjct: 1829 PVELP 1833
>sp|Q9DBH0|WWP2_MOUSE NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2
PE=1 SV=1
Length = 870
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 91 LPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTP 131
LPPGWE+ +DN YY + + T Q + P EP P
Sbjct: 407 LPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPALP 447
>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1
SV=1
Length = 414
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 82 LSSVEAEEQLPPGWERHEDNDGPYYW--HIKSGTIQRDPPEFTYGKNEPKTPLVKDAETV 139
L ++E++LPPGWE DG Y+ H + T P + P + ET
Sbjct: 9 LDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETD 68
Query: 140 NNDGPYYW-HIKSGTIQRDPP-EFTYGKN--EPKTPLVKDAET------NGSSSNSVLSM 189
N ++ HI T DP FT N +P T D T G + +
Sbjct: 69 ENGQVFFVDHINKRTTYLDPRLAFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVL 128
Query: 190 VTRSNTSSALE 200
VT +N+ E
Sbjct: 129 VTGANSGIGFE 139
>sp|O00308|WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2
PE=1 SV=2
Length = 870
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 91 LPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTP 131
LPPGWE+ +DN YY + + T Q + P EP P
Sbjct: 407 LPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPALP 447
>sp|Q96YR6|MRE11_SULTO DNA double-strand break repair protein Mre11 OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=mre11 PE=3 SV=1
Length = 387
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 124 GKNEPKTPLVKDAETVNNDGPYYWHIKSGT-------IQRDPPEFTYGKNEPKTPLVKDA 176
GK+ PK L+K+ + +NN PY+ K T ++ D P T +N LVK A
Sbjct: 288 GKSIPKNVLMKELQEINNFAPYWRIYKDNTKEKDEKDVKIDLPTDTTIENLIYNYLVKIA 347
Query: 177 ETNGSSSNSVLSMVTRSN 194
+ + + ++ ++ R++
Sbjct: 348 NFSETEARMIVDIINRAD 365
>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1
SV=1
Length = 414
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 82 LSSVEAEEQLPPGWERHEDNDGPYYW--HIKSGTIQRDPPEFTYGKNEPKTPLVKDAETV 139
L ++E++LPPGWE DG Y+ H + T P + P + ET
Sbjct: 9 LDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETD 68
Query: 140 NNDGPYYW-HIKSGTIQRDPP-EFTYGKNEPKTPLVKDAETNGSSSNSVL 187
N ++ HI T DP FT N P P + +++ +L
Sbjct: 69 ENGQVFFVDHINKRTTYLDPRLAFTVDDN-PTKPTTRQRYDGSTTAMEIL 117
>sp|A2QQ28|RSP5_ASPNC Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=hulA PE=3 SV=1
Length = 821
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 221 TNLSSFEDSQGRLPAGWERREDNLGRTYY 249
>sp|Q09685|DRE4_SCHPO DNA replication protein 4 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=dre4 PE=1 SV=1
Length = 411
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 91 LPPGWERHEDNDG-PYYWH--IKSGTIQR 116
LPPGW H+ G PYYW+ +K T QR
Sbjct: 5 LPPGWTEHKAPSGIPYYWNAELKKSTYQR 33
>sp|B8N7E5|RSP5_ASPFN Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=hulA PE=3 SV=1
Length = 812
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 216 TNLSSFEDSQGRLPAGWERREDNLGRTYY 244
>sp|Q2UBP1|RSP5_ASPOR Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=hulA PE=3 SV=2
Length = 816
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 219 TNLSSFEDSQGRLPAGWERREDNLGRTYY 247
>sp|A1CQG2|RSP5_ASPCL Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=hulA PE=3 SV=2
Length = 815
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 219 TNLSSFEDSQGRLPAGWERREDNLGRTYY 247
>sp|A1D3C5|RSP5_NEOFI Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=hulA PE=3 SV=1
Length = 816
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 220 TNLSSFEDSQGRLPAGWERREDNLGRTYY 248
>sp|Q92462|PUB1_SCHPO E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pub1 PE=1 SV=2
Length = 767
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 58 PVKLRGASPLPPLLADLSPSLSS--TLSSVEAE-EQLPPGWERHEDNDGPYYW 107
P R SP SP+ S T SS E + +LPPGWER DN G Y+
Sbjct: 171 PASSRAGSPTRDNAPAASPASSEPRTFSSFEDQYGRLPPGWERRTDNLGRTYY 223
>sp|Q4WTF3|RSP5_ASPFU Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=hulA PE=3 SV=2
Length = 813
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 217 TNLSSFEDSQGRLPAGWERREDNLGRTYY 245
>sp|B0XQ72|RSP5_ASPFC Probable E3 ubiquitin-protein ligase hulA OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=hulA PE=3
SV=2
Length = 813
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 80 STLSSVE-AEEQLPPGWERHEDNDGPYYW 107
+ LSS E ++ +LP GWER EDN G Y+
Sbjct: 217 TNLSSFEDSQGRLPAGWERREDNLGRTYY 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,074,900
Number of Sequences: 539616
Number of extensions: 5181535
Number of successful extensions: 10261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 10168
Number of HSP's gapped (non-prelim): 131
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)