Your job contains 1 sequence.
>psy3534
MSQMVPSPDIYQRSATYYEKPTPPRTLSLSEKASCTPAQGASIPHVPGDLNNDLYAVPVK
LRGASPLPPLLADLSPSLSSTLSSVEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPE
FTYGKNEPKTPLVKDAETVNNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNG
SSSNSVLSMVTRSNTSSALEDLDGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWV
EISEHDLTPERSSKAVNKCIVDLSLGRNHHSTIYFQSDFFSL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3534
(282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1562438 - symbol:Apbb2 "amyloid beta (A4) precursor p... 188 1.3e-13 2
UNIPROTKB|I3LJX4 - symbol:APBB2 "Uncharacterized protein"... 190 3.3e-13 1
UNIPROTKB|Q92870 - symbol:APBB2 "Amyloid beta A4 precurso... 189 5.2e-13 1
UNIPROTKB|F1MDE6 - symbol:APBB2 "Uncharacterized protein"... 188 9.3e-13 1
MGI|MGI:108405 - symbol:Apbb2 "amyloid beta (A4) precurso... 187 1.4e-12 1
WB|WBGene00001410 - symbol:feh-1 species:6239 "Caenorhabd... 183 5.2e-12 1
UNIPROTKB|E2R1T9 - symbol:APBB2 "Uncharacterized protein"... 181 1.2e-11 1
UNIPROTKB|Q9BYD4 - symbol:Fe65L2 "Fe65L2 isoform 214 (I-2... 159 1.4e-11 1
UNIPROTKB|Q96Q18 - symbol:Fe65L2 "Fe65L2 isoform 245" spe... 159 4.2e-10 1
UNIPROTKB|F1NND3 - symbol:APBB2 "Uncharacterized protein"... 165 1.3e-09 1
UNIPROTKB|E2QZC4 - symbol:APBB2 "Uncharacterized protein"... 165 1.4e-09 1
UNIPROTKB|D6RBA1 - symbol:APBB3 "Amyloid beta A4 precurso... 159 1.7e-09 1
UNIPROTKB|E7EX91 - symbol:APBB3 "Amyloid beta A4 precurso... 159 1.8e-09 1
UNIPROTKB|F1N3C4 - symbol:APBB3 "Uncharacterized protein"... 161 2.2e-09 1
UNIPROTKB|O95704 - symbol:APBB3 "Amyloid beta A4 precurso... 159 3.9e-09 1
UNIPROTKB|F1RGE6 - symbol:APBB3 "Uncharacterized protein"... 155 1.2e-08 1
RGD|620853 - symbol:Apbb3 "amyloid beta (A4) precursor pr... 152 2.8e-08 1
MGI|MGI:108404 - symbol:Apbb3 "amyloid beta (A4) precurso... 151 3.5e-08 1
UNIPROTKB|F1LPF8 - symbol:Apbb3 "Amyloid beta A4 precurso... 150 4.9e-08 1
UNIPROTKB|Q17QV1 - symbol:APBB1 "Uncharacterized protein"... 150 8.2e-08 1
UNIPROTKB|O00213 - symbol:APBB1 "Amyloid beta A4 precurso... 150 8.3e-08 1
UNIPROTKB|F1RMN5 - symbol:APBB1 "Uncharacterized protein"... 149 1.1e-07 1
MGI|MGI:107765 - symbol:Apbb1 "amyloid beta (A4) precurso... 145 3.2e-07 1
UNIPROTKB|E1BVF0 - symbol:E1BVF0 "Uncharacterized protein... 139 6.3e-07 1
RGD|2122 - symbol:Apbb1 "amyloid beta (A4) precursor prot... 139 1.6e-06 1
>RGD|1562438 [details] [associations]
symbol:Apbb2 "amyloid beta (A4) precursor protein-binding,
family B, member 2" species:10116 "Rattus norvegicus" [GO:0001764
"neuron migration" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=ISO] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
RGD:1562438 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0043066 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050 GO:GO:0043065
GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 IPI:IPI00958587
Ensembl:ENSRNOT00000049214 ArrayExpress:F1M906 Uniprot:F1M906
Length = 638
Score = 188 (71.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 63/191 (32%), Positives = 88/191 (46%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D G
Sbjct: 165 QTDPDLPPGWKRVSDIAGTYYWHIPTGTTQWERP----------VSIPADLH-----GS- 208
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ G++ P T +NE K P A NG NS + + N +L++
Sbjct: 209 ----RKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 262
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 263 EGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 322
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 323 NCIRQLSYCKN 333
Score = 38 (18.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 22 TPPRTLSL-SEK 32
TPP TL+L SEK
Sbjct: 1 TPPNTLNLXSEK 12
>UNIPROTKB|I3LJX4 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0030308 "negative regulation
of cell growth" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 OMA:TKNSTPP EMBL:CU406976
EMBL:CU407111 Ensembl:ENSSSCT00000029046 Uniprot:I3LJX4
Length = 759
Score = 190 (71.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 63/191 (32%), Positives = 89/191 (46%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D + G
Sbjct: 288 QTDPDLPPGWKRINDIAGTYYWHIPTGTTQWERP----------VSIPADLQ-----GS- 331
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ G++ P T +NE K P A NG NS + + N +L++
Sbjct: 332 ----RKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 385
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 386 EGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 445
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 446 NCIRQLSYCKN 456
>UNIPROTKB|Q92870 [details] [associations]
symbol:APBB2 "Amyloid beta A4 precursor protein-binding
family B member 2" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0035556 "intracellular signal
transduction" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0007050 "cell cycle arrest" evidence=ISS] [GO:0045749 "negative
regulation of S phase of mitotic cell cycle" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0030426 "growth cone"
evidence=ISS] [GO:0030027 "lamellipodium" evidence=ISS] [GO:0045202
"synapse" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005634
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0043066
GO:GO:0016020 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0035556 GO:GO:0030198 GO:GO:0045202
GO:GO:0007050 GO:GO:0030027 GO:GO:0030426 GO:GO:0043065
GO:GO:0001540 GO:GO:0008134 eggNOG:NOG76544 HOGENOM:HOG000033983
HOVERGEN:HBG050524 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
EMBL:AK299800 EMBL:AK226179 EMBL:AC093804 EMBL:AC096712
EMBL:AC108937 EMBL:AC131953 EMBL:BC027946 EMBL:U62325
IPI:IPI00470455 IPI:IPI00470456 IPI:IPI00947448
RefSeq:NP_001159522.1 RefSeq:NP_001159523.1 RefSeq:NP_001159524.1
RefSeq:NP_001159525.1 RefSeq:NP_001159526.1 RefSeq:NP_775098.2
UniGene:Hs.479602 ProteinModelPortal:Q92870 SMR:Q92870
IntAct:Q92870 MINT:MINT-1493142 STRING:Q92870 PhosphoSite:Q92870
DMDM:52788291 PRIDE:Q92870 DNASU:323 Ensembl:ENST00000295974
Ensembl:ENST00000502841 Ensembl:ENST00000504305
Ensembl:ENST00000508593 Ensembl:ENST00000513140
Ensembl:ENST00000543538 GeneID:323 KEGG:hsa:323 UCSC:uc003gvl.3
UCSC:uc003gvm.3 CTD:323 GeneCards:GC04M040812 HGNC:HGNC:582
HPA:HPA023542 MIM:602710 neXtProt:NX_Q92870 PharmGKB:PA24874
InParanoid:Q92870 KO:K04530 OMA:TKNSTPP ChiTaRS:APBB2
GenomeRNAi:323 NextBio:1325 ArrayExpress:Q92870 Bgee:Q92870
CleanEx:HS_APBB2 Genevestigator:Q92870 GermOnline:ENSG00000163697
Uniprot:Q92870
Length = 758
Score = 189 (71.6 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 63/191 (32%), Positives = 89/191 (46%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D + G
Sbjct: 287 QTDPDLPPGWKRVSDIAGTYYWHIPTGTTQWERP----------VSIPADLQ-----GS- 330
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ G++ P T +NE K P A NG NS + + N +L++
Sbjct: 331 ----RKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 384
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 385 EGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 444
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 445 NCIRQLSYCKN 455
>UNIPROTKB|F1MDE6 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0030308 "negative regulation
of cell growth" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0043066 GO:GO:0030308 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198 GO:GO:0007050
GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 OMA:TKNSTPP EMBL:DAAA02017500
EMBL:DAAA02017494 EMBL:DAAA02017495 EMBL:DAAA02017496
EMBL:DAAA02017497 EMBL:DAAA02017498 EMBL:DAAA02017499
IPI:IPI00807314 Ensembl:ENSBTAT00000039647 Uniprot:F1MDE6
Length = 758
Score = 188 (71.2 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 63/191 (32%), Positives = 87/191 (45%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D + G
Sbjct: 286 QTDPDLPPGWKRISDIAGTYYWHIPTGTTQWERP----------VSIPADLQ-----GSR 330
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ S T P +NE K P A NG NS + + N +L++
Sbjct: 331 KGSLSSVTSSPTP------ENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 383
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 384 EGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 443
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 444 NCIRQLSYCKN 454
>MGI|MGI:108405 [details] [associations]
symbol:Apbb2 "amyloid beta (A4) precursor protein-binding,
family B, member 2" species:10090 "Mus musculus" [GO:0001764
"neuron migration" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=IDA] [GO:0007411 "axon guidance" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030048 "actin
filament-based movement" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=IGI] [GO:0030308 "negative regulation
of cell growth" evidence=IDA] [GO:0035035 "histone
acetyltransferase binding" evidence=NAS] [GO:0043065 "positive
regulation of apoptotic process" evidence=IDA] [GO:0043066
"negative regulation of apoptotic process" evidence=IGI]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=NAS]
InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640
PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456
SMART:SM00462 MGI:MGI:108405 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0050821
GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0030198 PDB:2ROZ PDB:2YSZ PDB:2YT0 PDB:2YT1 PDBsum:2ROZ
PDBsum:2YSZ PDBsum:2YT0 PDBsum:2YT1 GO:GO:0007050 GO:GO:0043065
GO:GO:0008134 eggNOG:NOG76544 HOGENOM:HOG000033983
HOVERGEN:HBG050524 GO:GO:0045749 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 GO:GO:0035035 GO:GO:0030048 CTD:323
KO:K04530 OMA:TKNSTPP ChiTaRS:APBB2 EMBL:AK004792 EMBL:BC076587
IPI:IPI00187397 IPI:IPI00471423 IPI:IPI00471424
RefSeq:NP_001188343.1 RefSeq:NP_001188344.1 RefSeq:NP_033816.1
UniGene:Mm.5159 PDB:1WGU PDBsum:1WGU ProteinModelPortal:Q9DBR4
SMR:Q9DBR4 IntAct:Q9DBR4 STRING:Q9DBR4 PhosphoSite:Q9DBR4
PaxDb:Q9DBR4 PRIDE:Q9DBR4 Ensembl:ENSMUST00000159786
Ensembl:ENSMUST00000160870 GeneID:11787 KEGG:mmu:11787
UCSC:uc008xox.2 UCSC:uc008xoz.2 InParanoid:Q9DBR4 OrthoDB:EOG43XV35
EvolutionaryTrace:Q9DBR4 NextBio:279605 Bgee:Q9DBR4
Genevestigator:Q9DBR4 GermOnline:ENSMUSG00000029207 Uniprot:Q9DBR4
Length = 760
Score = 187 (70.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 63/191 (32%), Positives = 88/191 (46%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D G
Sbjct: 287 QTDPDLPPGWKRVNDIAGTYYWHIPTGTTQWERP----------VSIPADLH-----GS- 330
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ G++ P T +NE K P A NG NS + + N +L++
Sbjct: 331 ----RKGSLSSVTPSPT-PENE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 384
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 385 EGATLRYASLKLRNAPHGDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 444
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 445 NCIRQLSYCKN 455
>WB|WBGene00001410 [details] [associations]
symbol:feh-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0005884 "actin
filament" evidence=IDA] [GO:0001540 "beta-amyloid binding"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00640
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007631 GO:GO:0001540 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 EMBL:FO081806
UniGene:Cel.9305 GeneID:175373 KEGG:cel:CELE_Y54F10AM.2 CTD:175373
RefSeq:NP_497578.3 ProteinModelPortal:Q9BKZ9 SMR:Q9BKZ9
DIP:DIP-25952N STRING:Q9BKZ9 PRIDE:Q9BKZ9
EnsemblMetazoa:Y54F10AM.2a UCSC:Y54F10AM.2c.2 WormBase:Y54F10AM.2a
HOGENOM:HOG000019068 InParanoid:Q9BKZ9 OMA:TIMTEHR NextBio:887874
ArrayExpress:Q9BKZ9 Uniprot:Q9BKZ9
Length = 691
Score = 183 (69.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 49/136 (36%), Positives = 74/136 (54%)
Query: 145 YYWHIKSGTIQRDPP----EFTYGKNEPKTPL-----VKDAETNGSSSN-SVLSMVTRSN 194
YYWH+ SGTIQR PP + T ++ PL + ET + ++ + +
Sbjct: 280 YYWHVDSGTIQRQPPPPVRDVTPARSPSPPPLPPPITTANRETQADAPPPQIIQLPPQQP 339
Query: 195 T--SSALEDLDGKRK---EDLAFKRRSYPARAES-DTKDKLIRFAVRSLGWVEISEHDLT 248
A + KR+ ++++ + A E+ DT K +RFAVRSLGW +ISE +LT
Sbjct: 340 VIEEHAFKQTTTKRRIEQDEMSEREIEDVAMIENGDTYHKPVRFAVRSLGWTDISEDELT 399
Query: 249 PERSSKAVNKCIVDLS 264
E+SS+AVN+ IVDL+
Sbjct: 400 AEKSSRAVNRAIVDLT 415
Score = 142 (55.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 86 EAEEQLPPGWERHEDNDG-PYYWHIKSGTIQRDPP----EFTYGKNEPKTPLVKDAETVN 140
E + LPPGWE+HED G YYWH+ SGTIQR PP + T ++ PL T N
Sbjct: 260 EEPKDLPPGWEKHEDPQGYSYYWHVDSGTIQRQPPPPVRDVTPARSPSPPPLPPPITTAN 319
Query: 141 ND 142
+
Sbjct: 320 RE 321
>UNIPROTKB|E2R1T9 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:TKNSTPP
EMBL:AAEX03002526 EMBL:AAEX03002527 EMBL:AAEX03002528
EMBL:AAEX03002529 ProteinModelPortal:E2R1T9
Ensembl:ENSCAFT00000036067 Uniprot:E2R1T9
Length = 762
Score = 181 (68.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 62/191 (32%), Positives = 86/191 (45%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETVNNDGPY 145
+ + LPPGW+R D G YYWHI +GT Q + P + D G
Sbjct: 289 QTDPDLPPGWKRINDIAGTYYWHIPTGTTQWERP----------VSIPADLH-----GSR 333
Query: 146 YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRS---NTSSALEDL 202
+ S T P ++E K P A NG NS + + N +L++
Sbjct: 334 KGSLSSVTSSPTP------EHE-KQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEF 386
Query: 203 DGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERSSKAVN 257
+G + K R+ P + D+ D + FAVRSLGWVE++E DL P +SS AVN
Sbjct: 387 EGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVN 446
Query: 258 KCIVDLSLGRN 268
CI LS +N
Sbjct: 447 NCIRQLSYCKN 457
>UNIPROTKB|Q9BYD4 [details] [associations]
symbol:Fe65L2 "Fe65L2 isoform 214 (I-214)" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0035556 "intracellular signal transduction" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0035556 GO:GO:0015629 EMBL:AC011399 HOGENOM:HOG000033983
Gene3D:2.20.70.10 SUPFAM:SSF51045 UniGene:Hs.529449 HGNC:HGNC:20708
OrthoDB:EOG4RJG1S EMBL:AC116353 HOVERGEN:HBG075162 EMBL:AB049618
IPI:IPI00847152 SMR:Q9BYD4 STRING:Q9BYD4 Ensembl:ENST00000509914
Uniprot:Q9BYD4
Length = 214
Score = 159 (61.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELG----------DAEDPGTGTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + SY E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--RSNSLSWYGGESYIQSMEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
Score = 108 (43.1 bits), Expect = 0.00061, P = 0.00061
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 85 VEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNE-PKT 130
+E E LPPGW + D G YYWH+ SG+ Q P + G E P T
Sbjct: 25 LEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPTWELGDAEDPGT 71
>UNIPROTKB|Q96Q18 [details] [associations]
symbol:Fe65L2 "Fe65L2 isoform 245" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015629 EMBL:AC011399 HOGENOM:HOG000033983 Gene3D:2.20.70.10
SUPFAM:SSF51045 UniGene:Hs.529449 HGNC:HGNC:20708 EMBL:AC116353
EMBL:AB061224 IPI:IPI00847297 SMR:Q96Q18 STRING:Q96Q18
Ensembl:ENST00000467078 HOVERGEN:HBG075162 Uniprot:Q96Q18
Length = 245
Score = 159 (61.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELG----------DAEDPGTGTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + SY E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--RSNSLSWYGGESYIQSMEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
Score = 108 (43.1 bits), Expect = 0.00090, P = 0.00090
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 85 VEAEEQLPPGWERHEDNDGPYYWHIKSGTIQRDPPEFTYGKNE-PKT 130
+E E LPPGW + D G YYWH+ SG+ Q P + G E P T
Sbjct: 25 LEVEAGLPPGWRKIHDAAGTYYWHVPSGSTQWQRPTWELGDAEDPGT 71
>UNIPROTKB|F1NND3 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:TKNSTPP
EMBL:AADN02031228 IPI:IPI00823311 Ensembl:ENSGALT00000037427
ArrayExpress:F1NND3 Uniprot:F1NND3
Length = 686
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/190 (30%), Positives = 86/190 (45%)
Query: 86 EAEEQLPPGWERHEDNDGPYYWHIKSGTIQ-RDP---PEFTYGKNEPKTPLVKDAETVNN 141
+ + LPPGW++ D G YYWHI +GT Q + P P G + + + T
Sbjct: 209 QTDPDLPPGWKKINDIAGIYYWHIPTGTTQWQRPVSVPTDLQGSRKGSLGSITPSPTPET 268
Query: 142 DG-PY--YWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSA 198
+ P+ + + G I D + + P +K+ E G++ ++R+ S
Sbjct: 269 EKQPWSDFAVLNGGKINSDIWKDLHAATVNPDPSLKEFE--GATLRYASLKLSRNAPQS- 325
Query: 199 LEDLDGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNK 258
+D D SD + K FAVRSLGWVE++E DL P +SS AVN
Sbjct: 326 -DDDDS--------------CSINSDPEAKC--FAVRSLGWVEMAEEDLAPGKSSVAVNN 368
Query: 259 CIVDLSLGRN 268
CI LS +N
Sbjct: 369 CIRQLSYCKN 378
>UNIPROTKB|E2QZC4 [details] [associations]
symbol:APBB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0043066 GO:GO:0030308
GO:GO:0006355 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0030198
GO:GO:0007050 GO:GO:0043065 GO:GO:0045749 Gene3D:2.20.70.10
SUPFAM:SSF51045 ProteinModelPortal:E2QZC4
Ensembl:ENSCAFT00000025166 Uniprot:E2QZC4
Length = 739
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/136 (33%), Positives = 68/136 (50%)
Query: 141 ND--GPYYWHIKSGTIQRDPP-EFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSS 197
ND G YYWHI +GT Q + P + + + ++ + + L T N
Sbjct: 302 NDIAGTYYWHIPTGTTQWERPVSIPADLHGSRKGSLSSVTSSPTPEHEDLHAAT-VNPDP 360
Query: 198 ALEDLDGKRKEDLAFKRRSYPARAESDT----KDKLIR-FAVRSLGWVEISEHDLTPERS 252
+L++ +G + K R+ P + D+ D + FAVRSLGWVE++E DL P +S
Sbjct: 361 SLKEFEGATLRYASLKLRNAPHADDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKS 420
Query: 253 SKAVNKCIVDLSLGRN 268
S AVN CI LS +N
Sbjct: 421 SVAVNNCIRQLSYCKN 436
>UNIPROTKB|D6RBA1 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 EMBL:AC011399 HOGENOM:HOG000033983
Gene3D:2.20.70.10 SUPFAM:SSF51045 HGNC:HGNC:20708 ChiTaRS:APBB3
EMBL:AC116353 IPI:IPI01013617 ProteinModelPortal:D6RBA1 SMR:D6RBA1
Ensembl:ENST00000511201 ArrayExpress:D6RBA1 Bgee:D6RBA1
Uniprot:D6RBA1
Length = 337
Score = 159 (61.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELG----------DAEDPGTGTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + SY E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--RSNSLSWYGGESYIQSMEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
>UNIPROTKB|E7EX91 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 EMBL:AC011399 Gene3D:2.20.70.10
SUPFAM:SSF51045 HGNC:HGNC:20708 ChiTaRS:APBB3 EMBL:AC116353
IPI:IPI00967914 ProteinModelPortal:E7EX91 SMR:E7EX91
Ensembl:ENST00000358580 ArrayExpress:E7EX91 Bgee:E7EX91
Uniprot:E7EX91
Length = 339
Score = 159 (61.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELG----------DAEDPGTGTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + SY E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--RSNSLSWYGGESYIQSMEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
>UNIPROTKB|F1N3C4 [details] [associations]
symbol:APBB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:DAAA02020432 IPI:IPI00840216 UniGene:Bt.14642
Ensembl:ENSBTAT00000043198 ArrayExpress:F1N3C4 Uniprot:F1N3C4
Length = 486
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWESG----------DAEDPGKKTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD + L+ + SY R E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--QSNSLSWYGEESYIQRMEPGAKC----FAVRSLGWVEVPEEDLVPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
>UNIPROTKB|O95704 [details] [associations]
symbol:APBB3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005737 EMBL:CH471062
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629 GO:GO:0001540
EMBL:AC011399 HOGENOM:HOG000033983 HOVERGEN:HBG050524
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AB018247 EMBL:AB024745
EMBL:AF224708 EMBL:AF224709 EMBL:AF224710 EMBL:AF224711
EMBL:AK075280 EMBL:BC125187 IPI:IPI00032785 IPI:IPI00218293
IPI:IPI00218294 IPI:IPI00218296 RefSeq:NP_006042.3
RefSeq:NP_573418.2 RefSeq:NP_573419.2 RefSeq:NP_573420.2
UniGene:Hs.529449 PDB:2DYQ PDB:2YSC PDBsum:2DYQ PDBsum:2YSC
ProteinModelPortal:O95704 SMR:O95704 IntAct:O95704
MINT:MINT-1493083 STRING:O95704 PhosphoSite:O95704 PaxDb:O95704
PRIDE:O95704 Ensembl:ENST00000354402 Ensembl:ENST00000356738
Ensembl:ENST00000357560 Ensembl:ENST00000412920 GeneID:10307
KEGG:hsa:10307 UCSC:uc003lgb.1 UCSC:uc003lgd.1 UCSC:uc003lge.1
UCSC:uc021yeg.1 CTD:10307 GeneCards:GC05M139937 HGNC:HGNC:20708
HPA:HPA005571 MIM:602711 neXtProt:NX_O95704 PharmGKB:PA134958636
eggNOG:NOG80991 OMA:CQPHAGG ChiTaRS:APBB3 EvolutionaryTrace:O95704
GenomeRNAi:10307 NextBio:39057 ArrayExpress:O95704 Bgee:O95704
CleanEx:HS_APBB3 Genevestigator:O95704 GermOnline:ENSG00000113108
Uniprot:O95704
Length = 486
Score = 159 (61.0 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + G DAE G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELG----------DAEDPGTGTEGIWGLRPPKGRSFSSLES 92
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + SY E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 93 SLD--RSNSLSWYGGESYIQSMEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNC 146
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 147 IQQLAQTRS 155
>UNIPROTKB|F1RGE6 [details] [associations]
symbol:APBB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:CU459055 Ensembl:ENSSSCT00000015696 Uniprot:F1RGE6
Length = 485
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/129 (37%), Positives = 67/129 (51%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSM-VTRSNTSSALED 201
G YYWH+ SG+ Q P + EP DAE+ G+ + + + + + S+LE
Sbjct: 43 GTYYWHVPSGSTQWQRPTW-----EPG-----DAES-GTRTEGIWGLRPPKGRSFSSLES 91
Query: 202 -LDGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKC 259
LD R L+ + S+ R E K FAVRSLGWVE+ E DL P +SS AVN C
Sbjct: 92 SLD--RSNSLSWYGEESHIQRMEPGAKC----FAVRSLGWVEVPEEDLVPGKSSIAVNNC 145
Query: 260 IVDLSLGRN 268
I L+ R+
Sbjct: 146 IQQLAQTRS 154
>RGD|620853 [details] [associations]
symbol:Apbb3 "amyloid beta (A4) precursor protein-binding, family
B, member 3" species:10116 "Rattus norvegicus" [GO:0001540
"beta-amyloid binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0015629
"actin cytoskeleton" evidence=IEA;ISO] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
RGD:620853 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015629 GO:GO:0001540 HOGENOM:HOG000033983 HOVERGEN:HBG050524
Gene3D:2.20.70.10 SUPFAM:SSF51045 CTD:10307 eggNOG:NOG80991
EMBL:Y13413 IPI:IPI00213067 RefSeq:NP_446409.1 UniGene:Rn.30067
ProteinModelPortal:O35827 SMR:O35827 IntAct:O35827 STRING:O35827
PRIDE:O35827 GeneID:117026 KEGG:rno:117026 UCSC:RGD:620853
InParanoid:O35827 NextBio:619797 ArrayExpress:O35827
Genevestigator:O35827 GermOnline:ENSRNOG00000017849 Uniprot:O35827
Length = 504
Score = 152 (58.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 47/126 (37%), Positives = 60/126 (47%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDL 202
G YYWH+ SG+ Q P + + +P T E S S+ + N S++L
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELAE-DPGTGKEGIWELRPPKGRSFSSLDSSLNRSNSLTWY 101
Query: 203 DGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVD 262
+ ED SY E K FAVRSLGWVE+ E DL P +SS AVN CI
Sbjct: 102 N----ED------SYVRSLEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQ 147
Query: 263 LSLGRN 268
L+ RN
Sbjct: 148 LAQARN 153
>MGI|MGI:108404 [details] [associations]
symbol:Apbb3 "amyloid beta (A4) precursor protein-binding,
family B, member 3" species:10090 "Mus musculus" [GO:0001540
"beta-amyloid binding" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=TAS] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
MGI:MGI:108404 GO:GO:0005737 GO:GO:0043066 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015629 GO:GO:0001540 HOGENOM:HOG000033983
HOVERGEN:HBG050524 Gene3D:2.20.70.10 SUPFAM:SSF51045
GeneTree:ENSGT00390000000002 CTD:10307 eggNOG:NOG80991 OMA:CQPHAGG
EMBL:BC024809 IPI:IPI00153349 RefSeq:NP_666197.1 UniGene:Mm.89673
ProteinModelPortal:Q8R1C9 SMR:Q8R1C9 IntAct:Q8R1C9 STRING:Q8R1C9
PhosphoSite:Q8R1C9 PRIDE:Q8R1C9 Ensembl:ENSMUST00000001415
GeneID:225372 KEGG:mmu:225372 InParanoid:Q8R1C9 OrthoDB:EOG4RJG1S
NextBio:377647 Bgee:Q8R1C9 Genevestigator:Q8R1C9
GermOnline:ENSMUSG00000001379 Uniprot:Q8R1C9
Length = 486
Score = 151 (58.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 45/127 (35%), Positives = 57/127 (44%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDL 202
G YYWH+ SG+ Q P + + P AE G + + + S + D
Sbjct: 43 GTYYWHVPSGSTQWQRPTW-------ELP---GAEDPGRGTEGIWELRPPKGRSFSSLDS 92
Query: 203 DGKRKEDLA-FKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIV 261
R L + SY E K FAVRSLGWVE+ E DL P +SS AVN CI
Sbjct: 93 SLNRSNSLTWYSEDSYVRSLEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNCIQ 148
Query: 262 DLSLGRN 268
L+ RN
Sbjct: 149 QLAQTRN 155
>UNIPROTKB|F1LPF8 [details] [associations]
symbol:Apbb3 "Amyloid beta A4 precursor protein-binding
family B member 3" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 RGD:620853 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
IPI:IPI00213067 Ensembl:ENSRNOT00000024313 ArrayExpress:F1LPF8
Uniprot:F1LPF8
Length = 504
Score = 150 (57.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 47/126 (37%), Positives = 60/126 (47%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDL 202
G YYWH+ SG+ Q P + + +P T E S S+ + N S++L
Sbjct: 43 GTYYWHVPSGSTQWQRPTWELAE-DPGTGKEGIWELRPPKGRSFSSLDSSLNRSNSLTWY 101
Query: 203 DGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVD 262
+ ED SY E K FAVRSLGWVE+ E DL P +SS AVN CI
Sbjct: 102 N----ED------SYVRSLEPGAKC----FAVRSLGWVEVPEEDLAPGKSSIAVNNCIQQ 147
Query: 263 LSLGRN 268
L+ RN
Sbjct: 148 LAQTRN 153
>UNIPROTKB|Q17QV1 [details] [associations]
symbol:APBB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0045944 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0007050 GO:GO:0003682 GO:GO:0030027
GO:GO:0030426 GO:GO:0043065 GO:GO:0001540 GO:GO:0006302 CTD:322
eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:EAPMDLG
OrthoDB:EOG4X3H12 EMBL:DAAA02040853 EMBL:DAAA02040854
EMBL:DAAA02040855 EMBL:DAAA02040856 EMBL:DAAA02040857 EMBL:BC118165
IPI:IPI00711662 RefSeq:NP_001068654.1 UniGene:Bt.37476 SMR:Q17QV1
STRING:Q17QV1 Ensembl:ENSBTAT00000020791 GeneID:505096
KEGG:bta:505096 InParanoid:Q17QV1 NextBio:20866980 Uniprot:Q17QV1
Length = 707
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 49/145 (33%), Positives = 70/145 (48%)
Query: 140 NNDGPYYWHIKSGTIQRDPP---EFTYGKN-EPKTPLVKDAETNGSSSNSVLSMVTRSNT 195
+ G YYWHI +GT Q +PP + G + ++ L T+G +
Sbjct: 263 DTSGTYYWHIPTGTTQWEPPGRASPSQGSSPREESQLTWTGFTHGERFEDGEFWKDEPSE 322
Query: 196 SSALEDLDGKRKED--LAFKRRSYPARAESDTKDKL--------IR-FAVRSLGWVEISE 244
+ + DL K E+ L F +S ++KL I+ FAVRSLGWVE++E
Sbjct: 323 EAPM-DLGLKDPEEGMLPFPAQSLSPEPLPQEEEKLPPRNANPGIKCFAVRSLGWVEMTE 381
Query: 245 HDLTPERSSKAVNKCIVDLSLGRNH 269
+L P RSS AVN CI LS +N+
Sbjct: 382 EELAPGRSSVAVNNCIRQLSYHKNN 406
>UNIPROTKB|O00213 [details] [associations]
symbol:APBB1 "Amyloid beta A4 precursor protein-binding
family B member 1" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=ISS] [GO:0007050 "cell cycle arrest"
evidence=ISS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=ISS] [GO:0030308 "negative regulation
of cell growth" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=NAS;IPI] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0030426 "growth cone" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0043065
"positive regulation of apoptotic process" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042393 "histone binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0043967 "histone H4 acetylation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0070064 "proline-rich region binding"
evidence=IPI] InterPro:IPR001202 InterPro:IPR006020 Pfam:PF00397
Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179 PROSITE:PS50020
SMART:SM00456 SMART:SM00462 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007411
GO:GO:0001764 GO:GO:0007165 GO:GO:0045893 GO:GO:0043234
EMBL:CH471064 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0016607 GO:GO:0045211 GO:GO:0045944 GO:GO:0043197
GO:GO:0030198 GO:GO:0045665 GO:GO:0008542 PDB:3DXC PDB:3DXD
PDB:3DXE PDBsum:3DXC PDBsum:3DXD PDBsum:3DXE GO:GO:0045202
GO:GO:0042734 GO:GO:0050714 GO:GO:0007050 GO:GO:0006351
GO:GO:0003682 GO:GO:0006974 GO:GO:0030027 GO:GO:0030426
GO:GO:0043065 GO:GO:0001540 GO:GO:0043967 GO:GO:0010039
GO:GO:0007409 GO:GO:0006302 GO:GO:0008134 EMBL:L77864 EMBL:AF029234
EMBL:AF047835 EMBL:AK295241 EMBL:AC068733 EMBL:AC084337
EMBL:BC010854 IPI:IPI00010843 IPI:IPI00783577 RefSeq:NP_001155.1
RefSeq:NP_001244252.1 RefSeq:NP_001244254.1 RefSeq:NP_001244255.1
RefSeq:NP_663722.1 UniGene:Hs.372840 PDB:2E45 PDB:2HO2 PDB:2IDH
PDB:2OEI PDB:3D8D PDB:3D8E PDB:3D8F PDBsum:2E45 PDBsum:2HO2
PDBsum:2IDH PDBsum:2OEI PDBsum:3D8D PDBsum:3D8E PDBsum:3D8F
ProteinModelPortal:O00213 SMR:O00213 IntAct:O00213
MINT:MINT-1493266 STRING:O00213 PhosphoSite:O00213 PaxDb:O00213
PRIDE:O00213 DNASU:322 Ensembl:ENST00000299402
Ensembl:ENST00000311051 Ensembl:ENST00000530885 GeneID:322
KEGG:hsa:322 UCSC:uc001mdb.1 UCSC:uc001mdc.1 CTD:322
GeneCards:GC11M006414 H-InvDB:HIX0009398 HGNC:HGNC:581
HPA:CAB022104 MIM:602709 neXtProt:NX_O00213 PharmGKB:PA24873
eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529
ChiTaRS:APBB1 EvolutionaryTrace:O00213 GenomeRNAi:322 NextBio:1319
ArrayExpress:O00213 Bgee:O00213 CleanEx:HS_APBB1
Genevestigator:O00213 GermOnline:ENSG00000166313 GO:GO:0045749
GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10 SUPFAM:SSF51045
Uniprot:O00213
Length = 710
Score = 150 (57.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 48/145 (33%), Positives = 70/145 (48%)
Query: 140 NNDGPYYWHIKSGTIQRDPP---EFTYGKN-EPKTPLVKDAETNGSSSNSVLSMVTRSNT 195
+ G YYWHI +GT Q +PP + G + + ++ L +G +
Sbjct: 264 DTSGTYYWHIPTGTTQWEPPGRASPSQGSSPQEESQLTWTGFAHGEGFEDGEFWKDEPSD 323
Query: 196 SSALEDLDGKRKED--LAFKRRSYPARAESDTKDKL--------IR-FAVRSLGWVEISE 244
+ +E L K E+ L F +S ++KL I+ FAVRSLGWVE++E
Sbjct: 324 EAPME-LGLKEPEEGTLTFPAQSLSPEPLPQEEEKLPPRNTNPGIKCFAVRSLGWVEMTE 382
Query: 245 HDLTPERSSKAVNKCIVDLSLGRNH 269
+L P RSS AVN CI LS +N+
Sbjct: 383 EELAPGRSSVAVNNCIRQLSYHKNN 407
>UNIPROTKB|F1RMN5 [details] [associations]
symbol:APBB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0050760 "negative regulation of thymidylate synthase
biosynthetic process" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0045944 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0007050 GO:GO:0003682 GO:GO:0030027
GO:GO:0030426 GO:GO:0043065 GO:GO:0001540 GO:GO:0006302 KO:K04529
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 GeneTree:ENSGT00390000000002 OMA:EAPMDLG
EMBL:CU972372 RefSeq:XP_003357186.1 Ensembl:ENSSSCT00000015979
GeneID:100519163 KEGG:ssc:100519163 Uniprot:F1RMN5
Length = 709
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/146 (34%), Positives = 70/146 (47%)
Query: 140 NNDGPYYWHIKSGTIQRDPP-EFTYGKNEPKTPLVKDAET-NGSSSNSVLS--MVTRSNT 195
+ G YYWHI +GT Q +PP + +++ +P + T G + +
Sbjct: 263 DTSGTYYWHIPTGTTQWEPPGRASPSQSQGSSPREESQLTWTGFAHGEGFDDGEFWKDEP 322
Query: 196 SS-ALEDLDGKRKED--LAFKRRSYPARAESDTKDKL-IR--------FAVRSLGWVEIS 243
S A DL K E+ L F +S ++KL R FAVRSLGWVE++
Sbjct: 323 SEEAPMDLGLKEPEERVLPFPAQSLSPEPLPQEEEKLPARNANPGAKCFAVRSLGWVEMT 382
Query: 244 EHDLTPERSSKAVNKCIVDLSLGRNH 269
E +L P RSS AVN CI LS +N+
Sbjct: 383 EEELAPGRSSVAVNNCIRQLSYHKNN 408
>MGI|MGI:107765 [details] [associations]
symbol:Apbb1 "amyloid beta (A4) precursor protein-binding,
family B, member 1" species:10090 "Mus musculus" [GO:0001540
"beta-amyloid binding" evidence=ISO;IPI] [GO:0001764 "neuron
migration" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;IDA]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0008134 "transcription factor binding"
evidence=IDA] [GO:0008542 "visual learning" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=ISO] [GO:0030048 "actin filament-based movement"
evidence=NAS] [GO:0030198 "extracellular matrix organization"
evidence=IGI] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030426 "growth cone" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035035 "histone
acetyltransferase binding" evidence=NAS] [GO:0042393 "histone
binding" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043967 "histone H4
acetylation" evidence=ISO] [GO:0045202 "synapse" evidence=ISO]
[GO:0045211 "postsynaptic membrane" evidence=ISO] [GO:0045665
"negative regulation of neuron differentiation" evidence=IMP]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO;IMP]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050714 "positive regulation of protein secretion"
evidence=ISO] [GO:0050760 "negative regulation of thymidylate
synthase biosynthetic process" evidence=IDA] [GO:0050821 "protein
stabilization" evidence=NAS] [GO:0070064 "proline-rich region
binding" evidence=ISO] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 MGI:MGI:107765
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0048471
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0043234
GO:GO:0050821 GO:GO:0030308 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0016607 GO:GO:0045211 GO:GO:0045944
GO:GO:0043197 GO:GO:0030198 GO:GO:0045665 GO:GO:0008542
GO:GO:0045202 GO:GO:0042734 GO:GO:0050714 GO:GO:0007050
GO:GO:0006351 GO:GO:0003682 GO:GO:0030027 GO:GO:0030426
GO:GO:0043065 GO:GO:0001540 GO:GO:0043967 GO:GO:0010039
GO:GO:0006302 GO:GO:0008134 CTD:322 eggNOG:NOG76544
HOGENOM:HOG000033983 HOVERGEN:HBG050524 KO:K04529 ChiTaRS:APBB1
GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AF206720 EMBL:AK030748 EMBL:AK083830
EMBL:AK164140 EMBL:AC125227 EMBL:L77865 IPI:IPI00387261
IPI:IPI00626699 RefSeq:NP_001240814.1 RefSeq:NP_001240815.1
RefSeq:NP_033815.1 UniGene:Mm.38469 UniGene:Mm.490092
ProteinModelPortal:Q9QXJ1 SMR:Q9QXJ1 IntAct:Q9QXJ1 MINT:MINT-142893
STRING:Q9QXJ1 PhosphoSite:Q9QXJ1 PaxDb:Q9QXJ1 PRIDE:Q9QXJ1
Ensembl:ENSMUST00000081165 GeneID:11785 KEGG:mmu:11785
UCSC:uc009iyi.1 GeneTree:ENSGT00390000000002 InParanoid:Q9QXJ1
OMA:EAPMDLG OrthoDB:EOG4X3H12 NextBio:279601 Bgee:Q9QXJ1
Genevestigator:Q9QXJ1 GermOnline:ENSMUSG00000037032 GO:GO:0035035
GO:GO:0030048 Uniprot:Q9QXJ1
Length = 710
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 48/145 (33%), Positives = 69/145 (47%)
Query: 140 NNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAET-NGSSSNSVLSM--VTRSNTS 196
+ G YYWHI +GT Q +PP ++ +P + T G + + S
Sbjct: 264 DTSGTYYWHIPTGTTQWEPPGRA-SPSQGSSPQEESQLTWTGFAHQEGFEEGEFWKDEPS 322
Query: 197 S-ALEDLDGKRKED--LAFKRRSYPARAESDTKDKLIR---------FAVRSLGWVEISE 244
A +L K E+ L+F +S ++KL + FAVRSLGWVE++E
Sbjct: 323 EEAPMELGLKDPEEATLSFPAQSLSPEPVPQEEEKLSQRNANPGIKCFAVRSLGWVEMTE 382
Query: 245 HDLTPERSSKAVNKCIVDLSLGRNH 269
+L P RSS AVN CI LS +N+
Sbjct: 383 EELAPGRSSVAVNNCIRQLSYHKNN 407
>UNIPROTKB|E1BVF0 [details] [associations]
symbol:E1BVF0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] InterPro:IPR001202
InterPro:IPR006020 Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159
PROSITE:PS01179 PROSITE:PS50020 SMART:SM00456 SMART:SM00462
GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015629
Gene3D:2.20.70.10 SUPFAM:SSF51045 GeneTree:ENSGT00390000000002
OMA:CQPHAGG EMBL:AADN02063699 IPI:IPI00573148
ProteinModelPortal:E1BVF0 Ensembl:ENSGALT00000001704 Uniprot:E1BVF0
Length = 399
Score = 139 (54.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 42/122 (34%), Positives = 58/122 (47%)
Query: 143 GPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAETNGSSSNSVLSMVTRSNTSSALEDL 202
G YYWH+ +GT Q P + P L D E +++ + S +S
Sbjct: 43 GTYYWHVPTGTTQWQHPARS---TSPGGCLEADEEETLQETHTSKARPVPSPMASLT--- 96
Query: 203 DGKRKEDLAFKRRSYPARAESDTKDKLIRFAVRSLGWVEISEHDLTPERSSKAVNKCIVD 262
R+ L ++ + + ++ K FAVRSLGWVEI E DL P +SS AVN CI
Sbjct: 97 ---RRTSLTWQGDDFQ-QCGAEPSSKC--FAVRSLGWVEIPEEDLAPGKSSIAVNNCIQQ 150
Query: 263 LS 264
LS
Sbjct: 151 LS 152
>RGD|2122 [details] [associations]
symbol:Apbb1 "amyloid beta (A4) precursor protein-binding, family
B, member 1 (Fe65)" species:10116 "Rattus norvegicus" [GO:0001540
"beta-amyloid binding" evidence=IEA;ISO;ISS;IPI] [GO:0001764 "neuron
migration" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO;IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007050 "cell cycle arrest" evidence=IEA;ISO;ISS]
[GO:0007411 "axon guidance" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=IEA;ISO;ISS] [GO:0008542
"visual learning" evidence=IEA;ISO] [GO:0010039 "response to iron
ion" evidence=IEP] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA;ISO;ISS] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0030308
"negative regulation of cell growth" evidence=IEA;ISO;ISS]
[GO:0030426 "growth cone" evidence=IEA;ISO;ISS;IDA] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO;ISS] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA;ISO;ISS] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045739 "positive regulation
of DNA repair" evidence=IEA;ISO;IMP] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0050714 "positive regulation of protein secretion" evidence=IMP]
[GO:0050760 "negative regulation of thymidylate synthase biosynthetic
process" evidence=IEA;ISO;ISS] [GO:0070064 "proline-rich region
binding" evidence=IEA;ISO] InterPro:IPR001202 InterPro:IPR006020
Pfam:PF00397 Pfam:PF00640 PROSITE:PS01159 PROSITE:PS01179
PROSITE:PS50020 SMART:SM00456 SMART:SM00462 RGD:2122 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0043234 GO:GO:0030308 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0016607 GO:GO:0045211 GO:GO:0045944 GO:GO:0043197 GO:GO:0030198
GO:GO:0045665 GO:GO:0008542 GO:GO:0042734 GO:GO:0050714 GO:GO:0007050
GO:GO:0006351 GO:GO:0003682 GO:GO:0030027 GO:GO:0030426 GO:GO:0043065
GO:GO:0001540 GO:GO:0043967 GO:GO:0010039 GO:GO:0006302 GO:GO:0008134
CTD:322 eggNOG:NOG76544 HOGENOM:HOG000033983 HOVERGEN:HBG050524
KO:K04529 GO:GO:0045749 GO:GO:0050760 GO:GO:0045739 Gene3D:2.20.70.10
SUPFAM:SSF51045 OrthoDB:EOG4X3H12 EMBL:AF333983 EMBL:X60469
EMBL:X60468 IPI:IPI00188409 IPI:IPI00231515 PIR:S22571 PIR:S50818
RefSeq:NP_536726.1 UniGene:Rn.19953 ProteinModelPortal:P46933
SMR:P46933 DIP:DIP-682N DIP:DIP-852N IntAct:P46933 MINT:MINT-150919
STRING:P46933 PhosphoSite:P46933 PRIDE:P46933 GeneID:29722
KEGG:rno:29722 UCSC:RGD:2122 InParanoid:P46933 NextBio:610190
ArrayExpress:P46933 Genevestigator:P46933
GermOnline:ENSRNOG00000018020 Uniprot:P46933
Length = 711
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/145 (33%), Positives = 68/145 (46%)
Query: 140 NNDGPYYWHIKSGTIQRDPPEFTYGKNEPKTPLVKDAET-NGSSSNSVLSM--VTRSNTS 196
+ G YYWHI +GT Q +PP ++ +P + T G + + S
Sbjct: 265 DTSGTYYWHIPTGTTQWEPPGRA-SPSQGNSPQEESQLTWTGFAHQEGFEEGEFWKDEPS 323
Query: 197 S-ALEDLDGKRKED--LAFKRRSYPARAESDTKDKL--------IR-FAVRSLGWVEISE 244
A +L K E+ L F +S ++ L I+ FAVRSLGWVE++E
Sbjct: 324 EEAPMELGLKDPEEGTLPFSAQSLSPEPVPQEEENLPQRNANPGIKCFAVRSLGWVEMTE 383
Query: 245 HDLTPERSSKAVNKCIVDLSLGRNH 269
+L P RSS AVN CI LS +N+
Sbjct: 384 EELAPGRSSVAVNNCIRQLSYHKNN 408
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.130 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 282 262 0.00091 114 3 11 23 0.42 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 600 (64 KB)
Total size of DFA: 204 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.70u 0.10s 24.80t Elapsed: 00:00:11
Total cpu time: 24.70u 0.10s 24.80t Elapsed: 00:00:11
Start: Thu Aug 15 13:54:51 2013 End: Thu Aug 15 13:55:02 2013