Query psy3538
Match_columns 89
No_of_seqs 144 out of 1279
Neff 7.8
Searched_HMMs 13730
Date Fri Aug 16 19:14:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.9 5.3E-23 3.9E-27 117.1 7.1 58 32-89 2-59 (75)
2 d1wjza_ a.2.3.1 (A:) CSL-type 99.8 5.6E-21 4.1E-25 112.8 6.1 61 29-89 12-78 (94)
3 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 99.8 8.2E-21 6E-25 108.3 6.2 56 32-88 2-57 (77)
4 d1gh6a_ a.2.3.1 (A:) Large T a 99.8 1.5E-21 1.1E-25 118.7 1.8 54 31-88 6-61 (114)
5 d1fafa_ a.2.3.1 (A:) Large T a 99.8 8.9E-21 6.5E-25 108.8 3.5 56 29-88 7-64 (79)
6 d1iura_ a.2.3.1 (A:) Hypotheti 99.8 2.1E-20 1.5E-24 109.2 4.7 58 31-88 14-72 (88)
7 d1fpoa1 a.2.3.1 (A:1-76) HSC20 99.7 1.5E-18 1.1E-22 98.5 5.7 56 33-88 1-63 (76)
8 d1nz6a_ a.2.3.1 (A:) Auxilin J 99.7 2.2E-18 1.6E-22 102.3 3.9 58 32-89 32-92 (98)
9 d2i53a2 a.74.1.1 (A:158-267) C 56.5 12 0.00089 20.1 7.4 35 29-65 71-105 (110)
10 d1w53a_ a.186.1.2 (A:) Phospho 54.1 11 0.00083 19.9 4.1 42 42-83 39-80 (84)
11 d1aiea_ a.53.1.1 (A:) p53 tetr 50.6 8.3 0.0006 16.4 2.6 16 70-85 10-25 (31)
12 d1nu4a_ d.58.7.1 (A:) Spliceso 41.9 13 0.00096 18.9 3.1 23 39-61 9-31 (91)
13 d2msta_ d.58.7.1 (A:) Neural R 41.7 7.9 0.00057 18.9 2.0 19 40-58 6-24 (75)
14 d1x0fa1 d.58.7.1 (A:183-257) N 40.6 11 0.00081 18.8 2.6 18 40-57 6-23 (75)
15 d1vqos1 d.12.1.1 (S:1-81) Ribo 38.2 10 0.00075 19.9 2.2 21 38-58 25-45 (81)
16 d2gsva1 a.23.7.1 (A:3-69) Hypo 36.6 23 0.0017 17.5 4.4 40 48-87 26-65 (67)
17 d1no8a_ d.58.7.1 (A:) Nuclear 36.2 16 0.0011 18.1 2.7 19 39-57 6-24 (78)
18 d3bvua1 a.8.3.1 (A:412-522) Go 36.0 30 0.0022 18.6 5.9 38 46-83 43-83 (111)
19 d1hd0a_ d.58.7.1 (A:) Heteroge 36.0 11 0.00079 18.6 2.0 18 40-57 6-23 (75)
20 d2zjrq1 d.12.1.1 (Q:2-94) Ribo 35.7 11 0.00083 20.1 2.1 21 38-58 25-45 (93)
21 d2ghpa1 d.58.7.1 (A:116-196) U 34.8 15 0.0011 18.1 2.6 19 40-58 8-26 (81)
22 d1ckta_ a.21.1.1 (A:) High mob 34.4 24 0.0018 17.1 4.3 34 52-88 14-47 (71)
23 d2hf5a1 a.39.1.5 (A:81-113) Tr 34.3 12 0.00086 16.2 1.7 11 46-56 1-11 (33)
24 d1hsma_ a.21.1.1 (A:) High mob 33.8 26 0.0019 17.3 3.5 30 53-87 16-45 (79)
25 d1x5ta1 d.58.7.1 (A:8-90) Spli 32.5 13 0.00096 18.4 2.0 20 39-58 4-23 (83)
26 d2cqca1 d.58.7.1 (A:109-191) A 32.4 12 0.00085 18.7 1.8 20 38-57 14-33 (83)
27 d2disa1 d.58.7.1 (A:8-103) Hyp 31.6 19 0.0014 18.4 2.7 20 40-59 8-27 (96)
28 d1ug2a_ a.4.1.3 (A:) 2610100b2 31.1 17 0.0013 19.6 2.4 24 44-67 67-90 (95)
29 d1l3ka2 d.58.7.1 (A:103-181) N 30.4 17 0.0012 17.8 2.2 18 40-57 9-26 (79)
30 d1x5sa1 d.58.7.1 (A:8-97) Cold 30.2 20 0.0015 18.0 2.6 19 40-58 12-30 (90)
31 g1o7d.1 a.8.3.1 (B:385-422,C:4 29.7 34 0.0025 17.6 3.6 21 49-69 40-60 (95)
32 d1fxla1 d.58.7.1 (A:37-118) Hu 29.6 16 0.0012 18.0 2.0 18 40-57 9-26 (82)
33 d1fjeb1 d.58.7.1 (B:1-91) Nucl 29.3 22 0.0016 18.1 2.7 30 33-62 11-42 (91)
34 d2cqga1 d.58.7.1 (A:96-185) TA 29.0 14 0.001 19.0 1.7 20 38-57 13-32 (90)
35 d2qamt1 d.12.1.1 (T:1-93) Ribo 28.2 9.9 0.00072 20.4 1.0 21 38-58 31-51 (93)
36 d2cqha1 d.58.7.1 (A:2-81) IGF- 28.2 23 0.0017 17.5 2.6 18 40-57 8-25 (80)
37 d2q37a1 a.288.1.1 (A:6-160) OH 27.9 52 0.0038 18.9 4.5 14 71-84 86-99 (155)
38 d1pdoa_ c.54.1.1 (A:) IIA doma 27.7 30 0.0022 18.9 3.2 33 33-65 27-59 (129)
39 d1wgfa_ a.21.1.1 (A:) Nucleola 27.0 17 0.0013 18.6 1.9 32 51-87 32-63 (90)
40 d1x4ha1 d.58.7.1 (A:8-105) RNA 26.8 19 0.0014 18.3 2.0 19 40-58 15-33 (98)
41 d2lefa_ a.21.1.1 (A:) Lymphoid 26.8 13 0.00097 19.1 1.4 17 51-67 14-30 (86)
42 d2cqia1 d.58.7.1 (A:1-90) Nucl 26.7 27 0.002 17.5 2.7 19 40-58 15-33 (90)
43 d2cpfa1 d.58.7.1 (A:362-446) P 26.7 19 0.0014 17.8 2.0 18 40-57 5-22 (85)
44 d1b7fa1 d.58.7.1 (A:123-204) S 26.4 20 0.0014 17.6 2.0 19 39-57 8-26 (82)
45 d1k99a_ a.21.1.1 (A:) Nucleola 26.4 40 0.0029 17.0 3.5 33 51-88 22-54 (91)
46 d2apla1 a.258.1.1 (A:2-150) Hy 26.4 30 0.0022 20.1 3.0 28 56-83 17-44 (149)
47 d2ghpa2 d.58.7.1 (A:41-115) U4 25.9 15 0.0011 18.2 1.4 18 40-57 7-24 (75)
48 d1cvja2 d.58.7.1 (A:91-179) Po 25.8 20 0.0015 18.1 2.0 21 38-58 13-33 (89)
49 d1fxla2 d.58.7.1 (A:119-203) H 25.8 17 0.0012 18.2 1.7 21 38-58 11-31 (85)
50 d1whya_ d.58.7.1 (A:) Putative 25.3 20 0.0015 18.4 2.0 20 38-57 22-41 (97)
51 d1aisb1 a.74.1.2 (B:1108-1205) 25.1 32 0.0024 17.7 2.9 18 45-62 74-91 (98)
52 d1aisb2 a.74.1.2 (B:1206-1300) 25.1 34 0.0025 17.5 3.0 19 44-62 71-89 (95)
53 d2cpda1 d.58.7.1 (A:223-308) A 24.6 22 0.0016 17.7 2.0 20 38-57 13-32 (86)
54 d1x4aa1 d.58.7.1 (A:9-103) Spl 24.3 19 0.0014 18.4 1.7 20 38-57 19-38 (95)
55 d1l3ka1 d.58.7.1 (A:8-91) Nucl 23.8 20 0.0014 18.0 1.7 18 40-57 13-30 (84)
56 d1i11a_ a.21.1.1 (A:) Sox-5 {M 23.6 22 0.0016 17.4 1.8 31 52-87 15-45 (70)
57 d1brwa2 c.27.1.1 (A:71-330) Py 23.5 26 0.0019 21.7 2.5 44 24-67 42-89 (260)
58 d1whwa_ d.58.7.1 (A:) Probable 23.4 23 0.0017 18.1 2.0 18 40-57 15-32 (99)
59 d2o70a1 a.288.1.1 (A:2-166) OH 23.2 65 0.0048 18.4 6.0 45 40-84 33-111 (165)
60 d1q9ca_ a.22.1.3 (A:) Histone 23.1 70 0.0051 18.8 4.7 19 50-68 18-36 (172)
61 d1cvja1 d.58.7.1 (A:11-90) Pol 22.8 21 0.0016 17.5 1.7 18 40-57 7-24 (80)
62 d1uawa_ d.58.7.1 (A:) Musashi- 22.7 13 0.00096 18.5 0.8 19 40-58 7-25 (77)
63 d1wi6a1 d.58.7.1 (A:69-143) Ri 22.7 15 0.0011 18.1 1.0 19 40-58 5-23 (75)
64 d1wg5a_ d.58.7.1 (A:) Heteroge 22.5 21 0.0015 18.6 1.7 21 37-57 19-39 (104)
65 d2adca2 d.58.7.1 (A:444-531) P 22.5 22 0.0016 17.7 1.8 21 38-58 15-35 (88)
66 d2byea1 d.15.1.5 (A:2-110) Pho 21.9 19 0.0014 19.8 1.4 25 28-52 14-38 (109)
67 d2cq2a1 d.58.7.1 (A:25-125) Al 21.9 27 0.002 18.2 2.1 20 39-58 26-45 (101)
68 d2nv0a1 c.23.16.1 (A:1-195) Hy 21.8 29 0.0021 20.1 2.4 26 57-83 165-190 (195)
69 d1x5ua1 d.58.7.1 (A:7-99) Spli 21.5 27 0.002 17.7 2.0 21 38-58 14-34 (93)
70 d2cpea1 d.58.7.1 (A:353-453) R 20.8 22 0.0016 18.1 1.5 20 38-57 13-32 (101)
71 d1u6fa1 d.58.7.1 (A:1-139) RNA 20.6 39 0.0029 18.3 2.8 21 38-58 47-67 (139)
72 d1u2fa_ d.58.7.1 (A:) Splicing 20.6 24 0.0018 17.7 1.7 24 39-62 7-30 (90)
73 d1vola1 a.74.1.2 (A:113-207) T 20.4 44 0.0032 17.0 2.8 19 44-62 73-91 (95)
74 d1wf0a_ d.58.7.1 (A:) TAR DNA- 20.3 22 0.0016 17.9 1.5 20 38-57 10-29 (88)
75 d1coja2 d.44.1.1 (A:91-212) Fe 20.3 50 0.0037 18.1 3.2 20 70-89 101-120 (122)
76 d1weza_ d.58.7.1 (A:) Heteroge 20.3 16 0.0011 19.1 0.8 21 36-56 18-38 (102)
77 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 20.2 33 0.0024 17.4 2.2 18 40-57 14-31 (93)
78 d2cqba1 d.58.7.1 (A:1-89) Pept 20.2 33 0.0024 17.1 2.2 20 38-57 10-29 (89)
79 d1or7a1 a.4.13.2 (A:120-187) S 20.1 17 0.0013 17.5 0.9 34 30-63 35-68 (68)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=5.3e-23 Score=117.13 Aligned_cols=58 Identities=47% Similarity=0.785 Sum_probs=54.8
Q ss_pred ccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhCC
Q psy3538 32 KVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGEF 89 (89)
Q Consensus 32 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d~ 89 (89)
..|+|+||||++++|.++||++||++++++|||++++++.+++.|+.|++||++|+|.
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~ 59 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS 59 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSS
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCH
Confidence 4799999999999999999999999999999999987778899999999999999984
No 2
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=5.6e-21 Score=112.84 Aligned_cols=61 Identities=36% Similarity=0.614 Sum_probs=54.7
Q ss_pred cCcccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCCCCCc------HHHHHHHHHHHHHHHHhhCC
Q psy3538 29 SQAKVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDKNKGS------EAAAKKFREITAAYEVLGEF 89 (89)
Q Consensus 29 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~------~~~~~~f~~i~~Ay~~L~d~ 89 (89)
.....|||+||||+++++.++||++|+++++++|||+++.. +.+++.|+.|++||++|+|.
T Consensus 12 ~~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~ 78 (94)
T d1wjza_ 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE 78 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred hhhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 34457999999999999999999999999999999998653 56889999999999999983
No 3
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=8.2e-21 Score=108.34 Aligned_cols=56 Identities=45% Similarity=0.748 Sum_probs=52.8
Q ss_pred ccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q psy3538 32 KVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 32 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d 88 (89)
+.|+|+||||+++++.++|+++|+++++++|||++++ +++.+.|+.|++||++|+|
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-~~~~~~~~~i~~Ay~vLsd 57 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSD 57 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTC
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccc-hhHHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999999999999886 6688999999999999997
No 4
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=99.81 E-value=1.5e-21 Score=118.70 Aligned_cols=54 Identities=19% Similarity=0.417 Sum_probs=49.8
Q ss_pred cccChhhhhccCCCC--CHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q psy3538 31 AKVNYYSHLQVGSEA--TQNEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 31 ~~~~~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d 88 (89)
...++|+||||+++| +.++||+|||++++++|||++++ .++|+.|++||++|+|
T Consensus 6 ~~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~----~e~F~~I~~AY~vLsd 61 (114)
T d1gh6a_ 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMED 61 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----HHHHHHHHHHHHHhCC
Confidence 357899999999998 78899999999999999999987 5789999999999986
No 5
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=99.80 E-value=8.9e-21 Score=108.83 Aligned_cols=56 Identities=18% Similarity=0.299 Sum_probs=50.9
Q ss_pred cCcccChhhhhccCCCC--CHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q psy3538 29 SQAKVNYYSHLQVGSEA--TQNEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 29 ~~~~~~~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d 88 (89)
.....++|+||||++++ +.++||++||++++++|||++++ .+.|++|++||++|+|
T Consensus 7 ~~~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~----~e~~~~in~Ay~~L~d 64 (79)
T d1fafa_ 7 RADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKT 64 (79)
T ss_dssp HHHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC----HHHHHHHHHHHHHHCC
Confidence 34568999999999987 89999999999999999999876 5789999999999986
No 6
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.1e-20 Score=109.20 Aligned_cols=58 Identities=22% Similarity=0.262 Sum_probs=53.4
Q ss_pred cccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCCCCCc-HHHHHHHHHHHHHHHHhhC
Q psy3538 31 AKVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDKNKGS-EAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 31 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-~~~~~~f~~i~~Ay~~L~d 88 (89)
.-.++|+||||+++++.++||++||+++++||||+++++ +.+.+.|+.|++||++|++
T Consensus 14 ~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~ 72 (88)
T d1iura_ 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK 72 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 347999999999999999999999999999999999875 5689999999999999974
No 7
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.74 E-value=1.5e-18 Score=98.51 Aligned_cols=56 Identities=21% Similarity=0.433 Sum_probs=49.0
Q ss_pred cChhhhhccCCC--CCHHHHHHHHHHHHHhhCCCCCCCc-----HHHHHHHHHHHHHHHHhhC
Q psy3538 33 VNYYSHLQVGSE--ATQNEIKASYYRLSKLYHPDKNKGS-----EAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 33 ~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~-----~~~~~~f~~i~~Ay~~L~d 88 (89)
.|||++|||+++ ++.++||++|+++++++|||+..+. +.+.+.|..|++||++|+|
T Consensus 1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~d 63 (76)
T d1fpoa1 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRH 63 (76)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 379999999985 5589999999999999999996543 3478899999999999998
No 8
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.71 E-value=2.2e-18 Score=102.27 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=52.3
Q ss_pred ccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCCCCCc---HHHHHHHHHHHHHHHHhhCC
Q psy3538 32 KVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDKNKGS---EAAAKKFREITAAYEVLGEF 89 (89)
Q Consensus 32 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~~~~---~~~~~~f~~i~~Ay~~L~d~ 89 (89)
+.+.|.+||++..++.++||++||++++.+|||++++. ..+++.|+.|++||++|+|.
T Consensus 32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~ 92 (98)
T d1nz6a_ 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ 92 (98)
T ss_dssp TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCH
Confidence 45789999999999999999999999999999997654 45889999999999999983
No 9
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.49 E-value=12 Score=20.12 Aligned_cols=35 Identities=9% Similarity=0.213 Sum_probs=26.0
Q ss_pred cCcccChhhhhccCCCCCHHHHHHHHHHHHHhhCCCC
Q psy3538 29 SQAKVNYYSHLQVGSEATQNEIKASYYRLSKLYHPDK 65 (89)
Q Consensus 29 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk 65 (89)
...+.++|++| ..+++.++|...=.++...|--.|
T Consensus 71 ~~~~~~W~~~f--~~dvt~e~i~~i~~~il~lY~~~k 105 (110)
T d2i53a2 71 KPMYRRWWEQF--VQDVPVDVLEDICHQILDLYSQGK 105 (110)
T ss_dssp SCCSSCGGGGT--SSSCCHHHHHHHHHHHHTTTSSSC
T ss_pred CcccccHHHHH--HccCCHHHHHHHHHHHHHHHcccc
Confidence 34457899999 455689999988888877775444
No 10
>d1w53a_ a.186.1.2 (A:) Phosphoserine phosphatase RsbU, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=54.12 E-value=11 Score=19.92 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHH
Q psy3538 42 GSEATQNEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAY 83 (89)
Q Consensus 42 ~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay 83 (89)
..+.++++|-.-.++......||....-..+.+...++..+|
T Consensus 39 ek~IsPEeIV~iHk~~l~el~~~~~e~v~~Sfd~LlEVm~gy 80 (84)
T d1w53a_ 39 EHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGY 80 (84)
T ss_dssp HTTCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHc
Confidence 467899999999999999999997543233455555555555
No 11
>d1aiea_ a.53.1.1 (A:) p53 tetramerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.60 E-value=8.3 Score=16.39 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy3538 70 EAAAKKFREITAAYEV 85 (89)
Q Consensus 70 ~~~~~~f~~i~~Ay~~ 85 (89)
.+..+.|+++++|.+.
T Consensus 10 r~rfemfrelnealel 25 (31)
T d1aiea_ 10 RERFEMFRELNEALEL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4567899999999874
No 12
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.94 E-value=13 Score=18.93 Aligned_cols=23 Identities=13% Similarity=0.232 Sum_probs=19.6
Q ss_pred hccCCCCCHHHHHHHHHHHHHhh
Q psy3538 39 LQVGSEATQNEIKASYYRLSKLY 61 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l~~~~ 61 (89)
=||++.++.++|++..+.+..++
T Consensus 9 ~nLp~~~t~~dl~~~l~~~f~~~ 31 (91)
T d1nu4a_ 9 NNLNEKIKKDELKKSLHAIFSRF 31 (91)
T ss_dssp ESCCTTSCHHHHHHHHHHHHGGG
T ss_pred eCCCCCCCHHHHHHHHHHHhccc
Confidence 37899999999999988877766
No 13
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.72 E-value=7.9 Score=18.87 Aligned_cols=19 Identities=11% Similarity=0.286 Sum_probs=16.4
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+.+++.++|++-|.+..
T Consensus 6 nLp~~~te~~l~~~F~~~G 24 (75)
T d2msta_ 6 GLSVNTTVEDVKHYFEQFG 24 (75)
T ss_dssp CCCSSCCHHHHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHHhC
Confidence 6899999999999997753
No 14
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.60 E-value=11 Score=18.76 Aligned_cols=18 Identities=6% Similarity=0.292 Sum_probs=16.4
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+++.+.++|+..|.+.
T Consensus 6 nLp~~~te~~l~~~F~~~ 23 (75)
T d1x0fa1 6 GLSPDTPEEKIREYFGGF 23 (75)
T ss_dssp SCCSSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 789999999999999876
No 15
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=38.19 E-value=10 Score=19.85 Aligned_cols=21 Identities=14% Similarity=0.215 Sum_probs=18.4
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
+|-|+++++..+||++..++-
T Consensus 25 ~F~V~~~A~K~~IK~AVe~lf 45 (81)
T d1vqos1 25 QFAVDDRASKGEVADAVEEQY 45 (81)
T ss_dssp EEEECTTCCHHHHHHHHHHHH
T ss_pred EEEEcCcCCHHHHHHHHHHHc
Confidence 577999999999999988775
No 16
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=36.64 E-value=23 Score=17.54 Aligned_cols=40 Identities=13% Similarity=0.257 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhh
Q psy3538 48 NEIKASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLG 87 (89)
Q Consensus 48 ~~Ik~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~ 87 (89)
..+..-||..+...-.|....+.....+++.+.|||+-.+
T Consensus 26 hAmNaYYrsVvstlvqDqltKNa~vlkRiqHLdEAY~KVk 65 (67)
T d2gsva1 26 HAMNSYYRSVVSTLVQDQLTKNAVVLKRIQHLDEAYNKVK 65 (67)
T ss_dssp HHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 4567788999999999998877888999999999998654
No 17
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.19 E-value=16 Score=18.05 Aligned_cols=19 Identities=5% Similarity=0.186 Sum_probs=17.0
Q ss_pred hccCCCCCHHHHHHHHHHH
Q psy3538 39 LQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l 57 (89)
=||+++++.++|+..|.+.
T Consensus 6 ~nLp~~~~~~~l~~~F~~~ 24 (78)
T d1no8a_ 6 SNLDFGVSDADIQELFAEF 24 (78)
T ss_dssp ESCCTTCCHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHh
Confidence 3789999999999999886
No 18
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=36.03 E-value=30 Score=18.60 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHhhCCCCCCCc---HHHHHHHHHHHHHH
Q psy3538 46 TQNEIKASYYRLSKLYHPDKNKGS---EAAAKKFREITAAY 83 (89)
Q Consensus 46 ~~~~Ik~ayr~l~~~~HPDk~~~~---~~~~~~f~~i~~Ay 83 (89)
+.+++..+++.+....|-|-.++. +...+..+++.++.
T Consensus 43 ~~~~l~~~wk~l~~~Q~HD~I~GTs~~~V~~Dy~~rl~~~~ 83 (111)
T d3bvua1 43 IEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEAL 83 (111)
T ss_dssp HHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhccccccccccCcHHHHHHHHHHHHHHH
Confidence 457899999999999999998774 23334444444443
No 19
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.02 E-value=11 Score=18.60 Aligned_cols=18 Identities=11% Similarity=0.379 Sum_probs=16.0
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+++++.++|+..|.+.
T Consensus 6 nl~~~~te~~l~~~F~~~ 23 (75)
T d1hd0a_ 6 GLSWDTTKKDLKDYFSKF 23 (75)
T ss_dssp CCCTTCCHHHHHHHHHTT
T ss_pred CCCCcCCHHHHHHHHHhh
Confidence 789999999999999864
No 20
>d2zjrq1 d.12.1.1 (Q:2-94) Ribosomal protein L23 {Deinococcus radiodurans [TaxId: 1299]}
Probab=35.68 E-value=11 Score=20.13 Aligned_cols=21 Identities=29% Similarity=0.289 Sum_probs=18.5
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
++.|+++++..+||++..++-
T Consensus 25 ~F~V~~~atK~~Ik~ave~lf 45 (93)
T d2zjrq1 25 SFWVSPKATKTEIKDAIQQAF 45 (93)
T ss_dssp EEEECSSCTHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHc
Confidence 567899999999999998876
No 21
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.79 E-value=15 Score=18.08 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=16.3
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+++++.++|+..|.+..
T Consensus 8 nLp~~~t~~~l~~~f~~~G 26 (81)
T d2ghpa1 8 NFPPSYTQRNIRDLLQDIN 26 (81)
T ss_dssp CCCTTCCHHHHHHHHHHTT
T ss_pred CCCCcCCHHHHHHHHHHhC
Confidence 7889999999999997753
No 22
>d1ckta_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.38 E-value=24 Score=17.06 Aligned_cols=34 Identities=12% Similarity=0.188 Sum_probs=20.8
Q ss_pred HHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q psy3538 52 ASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 52 ~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d 88 (89)
...|..++.-|||...+ ..+..+.|.+.|..|++
T Consensus 14 ~~~r~~~k~~~p~~~~~---~~ei~k~~~~~Wk~ls~ 47 (71)
T d1ckta_ 14 QTCREEHKKKHPDASVN---FSEFSKKCSERWKTMSA 47 (71)
T ss_dssp HHHHHHHHHHCTTCCCC---HHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHCCCCCCC---HHHHHHHHHHHHcCCCH
Confidence 34455666678886554 34566666666666654
No 23
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=34.28 E-value=12 Score=16.20 Aligned_cols=11 Identities=18% Similarity=0.510 Sum_probs=7.4
Q ss_pred CHHHHHHHHHH
Q psy3538 46 TQNEIKASYYR 56 (89)
Q Consensus 46 ~~~~Ik~ayr~ 56 (89)
+.++|+.||+-
T Consensus 1 seeel~eAF~~ 11 (33)
T d2hf5a1 1 SEEEIREAFRV 11 (33)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45677777764
No 24
>d1hsma_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=33.77 E-value=26 Score=17.33 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=15.8
Q ss_pred HHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhh
Q psy3538 53 SYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLG 87 (89)
Q Consensus 53 ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~ 87 (89)
..|..++.-||+.... +..+.|.+.|..|+
T Consensus 16 ~~r~~i~~~~p~~~~~-----ei~k~~~~~W~~ls 45 (79)
T d1hsma_ 16 EYRPKIKGEHPGLSIG-----DVAKKLGEMWNNTA 45 (79)
T ss_dssp HHHHHHHHHCTTCCTT-----THHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCCCCHH-----HHHHHHhhHHhcCC
Confidence 3455556667876543 34444444554444
No 25
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.53 E-value=13 Score=18.45 Aligned_cols=20 Identities=5% Similarity=0.135 Sum_probs=16.9
Q ss_pred hccCCCCCHHHHHHHHHHHH
Q psy3538 39 LQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l~ 58 (89)
=||+.+++.++|+..|.+..
T Consensus 4 ~nLp~~~te~~l~~~F~~~G 23 (83)
T d1x5ta1 4 GNLDPEIDEKLLYDTFSAFG 23 (83)
T ss_dssp ECCCTTCCHHHHHHHHHTTS
T ss_pred cCCCCcCcHHHHHHHHHHhC
Confidence 37899999999999998753
No 26
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.37 E-value=12 Score=18.71 Aligned_cols=20 Identities=5% Similarity=0.245 Sum_probs=17.4
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|-||+.+++.++|+..|.+.
T Consensus 14 V~nL~~~~te~~l~~~F~~~ 33 (83)
T d2cqca1 14 VFGLSLYTTERDLREVFSKY 33 (83)
T ss_dssp EESCCSSCCHHHHHHHHHTT
T ss_pred EeCCCCCCCHHHHHHHHHHh
Confidence 55899999999999999765
No 27
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.56 E-value=19 Score=18.39 Aligned_cols=20 Identities=10% Similarity=0.180 Sum_probs=17.9
Q ss_pred ccCCCCCHHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLSK 59 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~~ 59 (89)
||+.+.+.++|+..|.+...
T Consensus 8 nLp~~~te~~l~~~f~~~g~ 27 (96)
T d2disa1 8 GIPKMKKREEILEEIAKVTE 27 (96)
T ss_dssp CCCTTSCHHHHHHHHHHHST
T ss_pred CCCCcCCHHHHHHHHHHhCC
Confidence 78999999999999998863
No 28
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.11 E-value=17 Score=19.61 Aligned_cols=24 Identities=21% Similarity=0.380 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCC
Q psy3538 44 EATQNEIKASYYRLSKLYHPDKNK 67 (89)
Q Consensus 44 ~a~~~~Ik~ayr~l~~~~HPDk~~ 67 (89)
+=+..+|+.+|..|.+.+|-....
T Consensus 67 ~Rs~~qvr~Rf~~Lm~lf~~~~e~ 90 (95)
T d1ug2a_ 67 NKTPVEVSHRFRELMQLFHTACES 90 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHHHHHhhcc
Confidence 457788888888888888876644
No 29
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.45 E-value=17 Score=17.78 Aligned_cols=18 Identities=0% Similarity=0.278 Sum_probs=15.5
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 9 nLp~~~te~~l~~~F~~~ 26 (79)
T d1l3ka2 9 GIKEDTEEHHLRDYFEQY 26 (79)
T ss_dssp CCTTTCCHHHHHHHHTTT
T ss_pred CCCCcCCHHHHHHHHHHh
Confidence 789999999999999653
No 30
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.17 E-value=20 Score=17.99 Aligned_cols=19 Identities=0% Similarity=0.246 Sum_probs=17.1
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+++++.++|+..|.+..
T Consensus 12 nLp~~~t~~~l~~~F~~~G 30 (90)
T d1x5sa1 12 GLSFDTNEQSLEQVFSKYG 30 (90)
T ss_dssp SCCTTCCHHHHHHHHHHHS
T ss_pred CCCCcCCHHHHHHhhhccc
Confidence 8999999999999998863
No 31
>g1o7d.1 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mannosidase {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.66 E-value=34 Score=17.63 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCc
Q psy3538 49 EIKASYYRLSKLYHPDKNKGS 69 (89)
Q Consensus 49 ~Ik~ayr~l~~~~HPDk~~~~ 69 (89)
++...++.+.+..|-|..++.
T Consensus 40 ~~~~lwk~ll~~Q~HD~i~GT 60 (95)
T g1o7d.1 40 DSAPLNEAMAVLQHHDAVSGT 60 (95)
T ss_dssp CSHHHHHHHHHTTBTTTTTCC
T ss_pred cHHHHHHHHHhcccccccCCc
Confidence 456789999999999998874
No 32
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.64 E-value=16 Score=17.98 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=15.9
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 9 nLp~~~te~~l~~~f~~~ 26 (82)
T d1fxla1 9 YLPQNMTQEEFRSLFGSI 26 (82)
T ss_dssp SCCTTCCHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 788999999999999765
No 33
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=29.29 E-value=22 Score=18.09 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=22.6
Q ss_pred cChhhhh--ccCCCCCHHHHHHHHHHHHHhhC
Q psy3538 33 VNYYSHL--QVGSEATQNEIKASYYRLSKLYH 62 (89)
Q Consensus 33 ~~~y~iL--gv~~~a~~~~Ik~ayr~l~~~~H 62 (89)
...|.|+ ||+.+++.++|+..|.+......
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~ 42 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKND 42 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEE
Confidence 3444544 89999999999999988865443
No 34
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.00 E-value=14 Score=19.04 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=17.7
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+.+++.++|+..|.+.
T Consensus 13 V~nLp~~~te~~l~~~F~~~ 32 (90)
T d2cqga1 13 VLGLPWKTTEQDLKEYFSTF 32 (90)
T ss_dssp EESCCSSCCHHHHHHHHGGG
T ss_pred EECCCCCCCHHHHHHHHHhh
Confidence 55899999999999999865
No 35
>d2qamt1 d.12.1.1 (T:1-93) Ribosomal protein L23 {Escherichia coli [TaxId: 562]}
Probab=28.24 E-value=9.9 Score=20.38 Aligned_cols=21 Identities=43% Similarity=0.504 Sum_probs=18.2
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
+|.|+++++..+||+|..++-
T Consensus 31 tF~V~~~AtK~eIK~ave~~f 51 (93)
T d2qamt1 31 VLKVAKDATKAEIKAAVQKLF 51 (93)
T ss_dssp CEEECSSCCSHHHHHHHHHTT
T ss_pred EEEECCCCCHHHHHHHHHHHh
Confidence 577999999999999988765
No 36
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.17 E-value=23 Score=17.47 Aligned_cols=18 Identities=6% Similarity=0.231 Sum_probs=15.5
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 8 nLp~~~te~~L~~~F~~~ 25 (80)
T d2cqha1 8 NLSPAVTADDLRQLFGDR 25 (80)
T ss_dssp CCCTTCCHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 788999999999998764
No 37
>d2q37a1 a.288.1.1 (A:6-160) OHCU decarboxylase, UraD {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.94 E-value=52 Score=18.88 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHH
Q psy3538 71 AAAKKFREITAAYE 84 (89)
Q Consensus 71 ~~~~~f~~i~~Ay~ 84 (89)
...+.|..+|.+|+
T Consensus 86 ~~~~~l~~lN~~Y~ 99 (155)
T d2q37a1 86 SALQELAEWNVLYK 99 (155)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35678899999996
No 38
>d1pdoa_ c.54.1.1 (A:) IIA domain of mannose transporter, IIA-Man {Escherichia coli [TaxId: 562]}
Probab=27.70 E-value=30 Score=18.88 Aligned_cols=33 Identities=6% Similarity=0.021 Sum_probs=29.1
Q ss_pred cChhhhhccCCCCCHHHHHHHHHHHHHhhCCCC
Q psy3538 33 VNYYSHLQVGSEATQNEIKASYYRLSKLYHPDK 65 (89)
Q Consensus 33 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk 65 (89)
.+....+++.++.+.+++++.+++...++.++.
T Consensus 27 ~~~i~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 59 (129)
T d1pdoa_ 27 QENVGWIDFVPGENAETLIEKYNAQLAKLDTTK 59 (129)
T ss_dssp CSSEEEECBCTTCCHHHHHHHHHHHHTTSCCTT
T ss_pred CCCeEEEEccCCCCHHHHHHHHHHHHHhcCCCC
Confidence 566788999999999999999999999998754
No 39
>d1wgfa_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.96 E-value=17 Score=18.57 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhh
Q psy3538 51 KASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLG 87 (89)
Q Consensus 51 k~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~ 87 (89)
.+.+|..++.-||+... .+..+.|.+.|..|+
T Consensus 32 ~~e~r~~~~~~~p~~~~-----~ei~k~l~~~W~~Ls 63 (90)
T d1wgfa_ 32 SEEKRRQLQEERPELSE-----SELTRLLARMWNDLS 63 (90)
T ss_dssp HHHTHHHHHHHCTTSCH-----HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCCCCH-----HHHHHHHHHHHHhCC
Confidence 34556777778998753 356666777776665
No 40
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.82 E-value=19 Score=18.29 Aligned_cols=19 Identities=0% Similarity=0.165 Sum_probs=17.0
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+.+++.++|+..|.+..
T Consensus 15 nLp~~~te~~l~~~f~~~G 33 (98)
T d1x4ha1 15 NLSFDSEEEALGEVLQQFG 33 (98)
T ss_dssp SCCTTCCHHHHHHHHHTTS
T ss_pred CCCCcCCHHHHHHHHhccc
Confidence 8999999999999998763
No 41
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.81 E-value=13 Score=19.06 Aligned_cols=17 Identities=6% Similarity=-0.265 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhCCCCCC
Q psy3538 51 KASYYRLSKLYHPDKNK 67 (89)
Q Consensus 51 k~ayr~l~~~~HPDk~~ 67 (89)
.+.+|..++.-|||...
T Consensus 14 ~~~~r~~~~~~~P~~~~ 30 (86)
T d2lefa_ 14 MKEMRANVVAESTLKES 30 (86)
T ss_dssp HHHHHHHHHHHSSCCCH
T ss_pred HHHHHHHHHHHCCCCCH
Confidence 35578888888998754
No 42
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.70 E-value=27 Score=17.52 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=16.8
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+.+++.++|+..|.+..
T Consensus 15 nLp~~~te~~l~~~F~~~G 33 (90)
T d2cqia1 15 NLSRDVTEVLILQLFSQIG 33 (90)
T ss_dssp SCCTTCCHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHhcC
Confidence 7899999999999998773
No 43
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.65 E-value=19 Score=17.85 Aligned_cols=18 Identities=11% Similarity=0.355 Sum_probs=15.7
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+.+.++|++.|.+.
T Consensus 5 nLp~~~t~~~l~~~F~~~ 22 (85)
T d2cpfa1 5 NLNFSTTEETLKGVFSKV 22 (85)
T ss_dssp SCCTTCCHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 789999999999988765
No 44
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=26.43 E-value=20 Score=17.63 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=16.4
Q ss_pred hccCCCCCHHHHHHHHHHH
Q psy3538 39 LQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l 57 (89)
=||+++.+.++|+..|.+.
T Consensus 8 ~nLp~~~t~~~l~~~F~~~ 26 (82)
T d1b7fa1 8 NYLPQDMTDRELYALFRAI 26 (82)
T ss_dssp ECCCTTCCHHHHHHHHHTT
T ss_pred eCCCCCCCHHHHHHHHHHh
Confidence 3789999999999999775
No 45
>d1k99a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.42 E-value=40 Score=17.05 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhhC
Q psy3538 51 KASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLGE 88 (89)
Q Consensus 51 k~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~d 88 (89)
-+.++..++.-||+.... +....|.+.|..|++
T Consensus 22 ~~~~r~~~~~~~p~~~~~-----ev~k~l~~~W~~ls~ 54 (91)
T d1k99a_ 22 FMEKRAKYAKLHPEMSNL-----DLTKILSKKYKELPE 54 (91)
T ss_dssp HHHHHHHHHTTCTTSCSH-----HHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHCCCCCHH-----HHHHHHHhHhcCCCH
Confidence 344556666678876542 444555556655554
No 46
>d2apla1 a.258.1.1 (A:2-150) Hypothetical protein PG0816 {Porphyromonas gingivalis [TaxId: 837]}
Probab=26.41 E-value=30 Score=20.12 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=16.2
Q ss_pred HHHHhhCCCCCCCcHHHHHHHHHHHHHH
Q psy3538 56 RLSKLYHPDKNKGSEAAAKKFREITAAY 83 (89)
Q Consensus 56 ~l~~~~HPDk~~~~~~~~~~f~~i~~Ay 83 (89)
...+..||++.++.+-..++-..-.+||
T Consensus 17 ~yL~eshPe~a~D~~FI~~Rad~Aa~aY 44 (149)
T d2apla1 17 TYLNEHFPEMSGNNPFITARSDEALTAY 44 (149)
T ss_dssp HHHHHHCGGGTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCchhccchHHHHHHHHHHHHHH
Confidence 3457889999988543333333333333
No 47
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.91 E-value=15 Score=18.15 Aligned_cols=18 Identities=11% Similarity=0.150 Sum_probs=15.5
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|++-|...
T Consensus 7 nlp~~~t~~~l~~~F~~~ 24 (75)
T d2ghpa2 7 NLPKSYNQNKVYKYFKHC 24 (75)
T ss_dssp EECTTCCHHHHHHHHGGG
T ss_pred CCCCCCCHHHHHHHHhcC
Confidence 688899999999988764
No 48
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.81 E-value=20 Score=18.06 Aligned_cols=21 Identities=0% Similarity=0.101 Sum_probs=17.9
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
|=||+.+++.++|+..|.+..
T Consensus 13 V~nLp~~~t~~~l~~~F~~~G 33 (89)
T d1cvja2 13 IKNLDKSIDNKALYDTFSAFG 33 (89)
T ss_dssp EESCCSSCCHHHHHHHHHTTS
T ss_pred EeCCCCCCCHHHHHHHHHhcC
Confidence 568999999999999997653
No 49
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.80 E-value=17 Score=18.22 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=17.7
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
|=||+++.+.++|+..|.+..
T Consensus 11 V~nLp~~~te~~L~~~F~~~G 31 (85)
T d1fxla2 11 VSGLPKTMTQKELEQLFSQYG 31 (85)
T ss_dssp EESCCTTCCHHHHHHHHGGGS
T ss_pred EeCCCCCCCHHHHHHHHHHhC
Confidence 458999999999999997664
No 50
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.27 E-value=20 Score=18.38 Aligned_cols=20 Identities=10% Similarity=0.227 Sum_probs=16.8
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+++++.++|+..|.+.
T Consensus 22 V~nLp~~~t~~~l~~~f~~~ 41 (97)
T d1whya_ 22 VGGLGPNTSLAALAREFDRF 41 (97)
T ss_dssp EECCCSSCCHHHHHHHHHTT
T ss_pred EcCCCCCCCHHHHHHHHHhh
Confidence 44899999999999999765
No 51
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=25.13 E-value=32 Score=17.66 Aligned_cols=18 Identities=22% Similarity=0.336 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHHHHhhC
Q psy3538 45 ATQNEIKASYYRLSKLYH 62 (89)
Q Consensus 45 a~~~~Ik~ayr~l~~~~H 62 (89)
.+..+|.+.|+.+.+...
T Consensus 74 is~~ti~k~yk~i~~~L~ 91 (98)
T d1aisb1 74 VDKKEIGRSYRFIARNLN 91 (98)
T ss_dssp SCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 588999999999988653
No 52
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=25.08 E-value=34 Score=17.49 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=15.6
Q ss_pred CCCHHHHHHHHHHHHHhhC
Q psy3538 44 EATQNEIKASYYRLSKLYH 62 (89)
Q Consensus 44 ~a~~~~Ik~ayr~l~~~~H 62 (89)
+.+..+|++.|+.+.....
T Consensus 71 ~vs~~tI~~~yk~l~~~l~ 89 (95)
T d1aisb2 71 RVTEVTVRNRYKELVEKLK 89 (95)
T ss_dssp TCCHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHhC
Confidence 4588899999999987654
No 53
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.55 E-value=22 Score=17.67 Aligned_cols=20 Identities=5% Similarity=0.125 Sum_probs=16.4
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+.+++.++|+..|.+.
T Consensus 13 V~nLp~~~te~~l~~~F~~~ 32 (86)
T d2cpda1 13 VRNLMLSTSEEMIEKEFNNI 32 (86)
T ss_dssp EESCCTTCCHHHHHHHHHTT
T ss_pred EcCCCCCCCHHHHHHhhccc
Confidence 44889999999999888654
No 54
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.32 E-value=19 Score=18.44 Aligned_cols=20 Identities=10% Similarity=0.328 Sum_probs=17.1
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=+|+++++.++|++.|.+.
T Consensus 19 V~nLp~~~t~~~l~~~F~~~ 38 (95)
T d1x4aa1 19 VGNLPPDIRTKDIEDVFYKY 38 (95)
T ss_dssp EESCCTTCCHHHHHHHHGGG
T ss_pred EECCCCCCCHHHHHHHHhcC
Confidence 55899999999999988764
No 55
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.76 E-value=20 Score=17.98 Aligned_cols=18 Identities=11% Similarity=0.311 Sum_probs=15.9
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 13 nlp~~~te~~l~~~F~~~ 30 (84)
T d1l3ka1 13 GLSFETTDESLRSHFEQW 30 (84)
T ss_dssp SCCTTCCHHHHHHHHGGG
T ss_pred CCCCCCCHHHHHHHHHhh
Confidence 799999999999999654
No 56
>d1i11a_ a.21.1.1 (A:) Sox-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.56 E-value=22 Score=17.38 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=17.3
Q ss_pred HHHHHHHHhhCCCCCCCcHHHHHHHHHHHHHHHHhh
Q psy3538 52 ASYYRLSKLYHPDKNKGSEAAAKKFREITAAYEVLG 87 (89)
Q Consensus 52 ~ayr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~~L~ 87 (89)
+..|..++.-||+... .+..+.|.+.|..|+
T Consensus 15 ~~~r~~i~~~~p~~~~-----~eisk~lg~~Wk~ls 45 (70)
T d1i11a_ 15 KDERRKILQAFPDMHN-----SNISKILGSRWKAMT 45 (70)
T ss_dssp HHHHHHHHTTCSSCCH-----HHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhccCCH-----HHHHHHHHHHHHhCC
Confidence 4556667777887653 244444544444443
No 57
>d1brwa2 c.27.1.1 (A:71-330) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.51 E-value=26 Score=21.71 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=34.6
Q ss_pred hhhcccCcccChhhhh-ccCCCCCHHHHHHHHHHHHHh---hCCCCCC
Q psy3538 24 SALYSSQAKVNYYSHL-QVGSEATQNEIKASYYRLSKL---YHPDKNK 67 (89)
Q Consensus 24 ~~~~~~~~~~~~y~iL-gv~~~a~~~~Ik~ayr~l~~~---~HPDk~~ 67 (89)
|...+.....|-.+-| ||.-+.+++++++...+.-.- +.|...+
T Consensus 42 RsvSSksGSADvLEaL~Gv~i~~~~e~~~~~l~e~g~~Fl~~a~~~hp 89 (260)
T d1brwa2 42 RGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNENGIAIIGQTGDLTP 89 (260)
T ss_dssp CCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHHSEEEEECCTTSCH
T ss_pred CccCCCCchHHHHHhccCCCCCCCHHHHHHHHHhcCceeeccCcccCc
Confidence 4445677889999999 999999999999999987644 3555544
No 58
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.38 E-value=23 Score=18.13 Aligned_cols=18 Identities=0% Similarity=0.241 Sum_probs=15.9
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 15 nL~~~~t~~~l~~~F~~~ 32 (99)
T d1whwa_ 15 NLSYTSSEEDLEKLFSAY 32 (99)
T ss_dssp CCCTTCCHHHHHHHHHTT
T ss_pred CCCCcCCHHHHHHHHHhc
Confidence 899999999999999753
No 59
>d2o70a1 a.288.1.1 (A:2-166) OHCU decarboxylase, UraD {Zebrafish (Brachydanio rerio) [TaxId: 7955]}
Probab=23.17 E-value=65 Score=18.42 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=28.5
Q ss_pred ccCCCCCHHHHHHHHHH-----------HHHhhCCCCCCCc-----------------------HHHHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYR-----------LSKLYHPDKNKGS-----------------------EAAAKKFREITAAYE 84 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~-----------l~~~~HPDk~~~~-----------------------~~~~~~f~~i~~Ay~ 84 (89)
.-.|..+.+++..+... .+...|||-++.. +...+.|..+|.+|+
T Consensus 33 ~~rPF~s~~~L~~a~~~~~~~~~~~~~~~~l~~HP~Lg~~~~~~~~lt~~s~~eq~~agl~~~~~~e~~~l~~lN~~Y~ 111 (165)
T d2o70a1 33 SYRPFKDLADIEARISEFIHSLPDSGKEGILRCHPDLAGRDLQSGTLTPESQEEQSQAGMTTLDSAEIVHMYRLNSEYK 111 (165)
T ss_dssp GGCSCSSHHHHHHHHHHHHHHSCHHHHHHHHHTSCCTTSHHHHHTCCCHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHHHHHcCcchhHHHHHhCchhhhchhhhhhhhhhhhhhhhccccccCCHHHHHHHHHHHHHHH
Confidence 33445555555555533 3567799997421 346778899999996
No 60
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.06 E-value=70 Score=18.75 Aligned_cols=19 Identities=11% Similarity=0.251 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhhCCCCCCC
Q psy3538 50 IKASYYRLSKLYHPDKNKG 68 (89)
Q Consensus 50 Ik~ayr~l~~~~HPDk~~~ 68 (89)
...+.++..++.||+..-.
T Consensus 18 f~~~i~KVl~qvhP~l~i~ 36 (172)
T d1q9ca_ 18 LVPALKKVQGQVHPTLESN 36 (172)
T ss_dssp SHHHHHHHHHHHCSSSBCC
T ss_pred HHHHHHHHHHHhCCCCCcC
Confidence 4667899999999999866
No 61
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.77 E-value=21 Score=17.54 Aligned_cols=18 Identities=6% Similarity=0.156 Sum_probs=15.6
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+++.+.++|++.|.+.
T Consensus 7 nL~~~~te~~l~~~F~~~ 24 (80)
T d1cvja1 7 DLHPDVTEAMLYEKFSPA 24 (80)
T ss_dssp SCCTTCCHHHHHHHHGGG
T ss_pred CCCCcCCHHHHHHHHHHh
Confidence 788999999999988765
No 62
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.73 E-value=13 Score=18.47 Aligned_cols=19 Identities=11% Similarity=0.249 Sum_probs=15.9
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+.+.+.++|+..|.+..
T Consensus 7 nLp~~~te~~l~~~F~~~G 25 (77)
T d1uawa_ 7 GLSWQTTQEGLREYFGQFG 25 (77)
T ss_dssp SCCSSCCSHHHHHHHTTTS
T ss_pred CCCCcCCHHHHHHHHHHhC
Confidence 7889999999999887653
No 63
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.72 E-value=15 Score=18.14 Aligned_cols=19 Identities=11% Similarity=0.163 Sum_probs=15.4
Q ss_pred ccCCCCCHHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l~ 58 (89)
||+++.+.++|+..|.+.-
T Consensus 5 nLp~~~t~~~l~~~F~~~g 23 (75)
T d1wi6a1 5 GLPGDVTNQEVHDLLSDYE 23 (75)
T ss_dssp CCCTTCCHHHHHHHTTTSC
T ss_pred CCCCcCCHHHHHHHHhccc
Confidence 7889999999998886543
No 64
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=21 Score=18.58 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=17.8
Q ss_pred hhhccCCCCCHHHHHHHHHHH
Q psy3538 37 SHLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 37 ~iLgv~~~a~~~~Ik~ayr~l 57 (89)
-|=||+.+++.++|+.-|...
T Consensus 19 ~v~nLP~~~te~dI~~~F~~~ 39 (104)
T d1wg5a_ 19 RLRGLPFGCSKEEIVQFFSGL 39 (104)
T ss_dssp EEESCCTTCCHHHHHHHTTTC
T ss_pred EEeCCCCCCCHHHHHHHHHhc
Confidence 344999999999999999765
No 65
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.46 E-value=22 Score=17.73 Aligned_cols=21 Identities=5% Similarity=0.162 Sum_probs=17.4
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
|-+|+.+++.++|+..|.+..
T Consensus 15 V~NLp~~~te~~l~~~F~~~G 35 (88)
T d2adca2 15 LSNIPPSVSEEDLKVLFSSNG 35 (88)
T ss_dssp EECCCTTCCHHHHHHHHHTTS
T ss_pred EECCCCCCCHHHHHHHhhccC
Confidence 558899999999999987653
No 66
>d2byea1 d.15.1.5 (A:2-110) Phospholipase C-epsilon-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.94 E-value=19 Score=19.80 Aligned_cols=25 Identities=0% Similarity=0.097 Sum_probs=19.7
Q ss_pred ccCcccChhhhhccCCCCCHHHHHH
Q psy3538 28 SSQAKVNYYSHLQVGSEATQNEIKA 52 (89)
Q Consensus 28 ~~~~~~~~y~iLgv~~~a~~~~Ik~ 52 (89)
..-.+..+|.+|.|+...+..+|=+
T Consensus 14 ~~v~~~~Py~~l~is~~sTA~~Vv~ 38 (109)
T d2byea1 14 HGVPGPEPFTVFTINGGTKAKQLLQ 38 (109)
T ss_dssp SSCSSSSSSEEEECCTTCCHHHHHH
T ss_pred EECCCCCCcEEEEECCCccHHHHHH
Confidence 3456789999999999988876544
No 67
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.87 E-value=27 Score=18.21 Aligned_cols=20 Identities=10% Similarity=0.179 Sum_probs=17.4
Q ss_pred hccCCCCCHHHHHHHHHHHH
Q psy3538 39 LQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l~ 58 (89)
-||+.+.+.++|+..|.+..
T Consensus 26 g~L~~~vte~~L~~~F~~~G 45 (101)
T d2cq2a1 26 GGLGNGVSRNQLLPVLEKCG 45 (101)
T ss_dssp CTGGGTCCHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHhhC
Confidence 45899999999999998764
No 68
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}
Probab=21.76 E-value=29 Score=20.13 Aligned_cols=26 Identities=23% Similarity=0.506 Sum_probs=17.6
Q ss_pred HHHhhCCCCCCCcHHHHHHHHHHHHHH
Q psy3538 57 LSKLYHPDKNKGSEAAAKKFREITAAY 83 (89)
Q Consensus 57 l~~~~HPDk~~~~~~~~~~f~~i~~Ay 83 (89)
+..++||.+..+ ....+.|..+-+.+
T Consensus 165 ~g~QFHPE~s~~-~~~~~~F~~~~~~~ 190 (195)
T d2nv0a1 165 LGCSFHPELTED-HRVTQLFVEMVEEY 190 (195)
T ss_dssp EEESSCTTSSSC-CHHHHHHHHHHHHH
T ss_pred EEEEeCCcccCC-cHHHHHHHHHHHHH
Confidence 456899999776 34556776666554
No 69
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.48 E-value=27 Score=17.73 Aligned_cols=21 Identities=0% Similarity=-0.021 Sum_probs=17.7
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
|=||+.+++.++|+..|.+..
T Consensus 14 V~nLp~~~t~~~l~~~F~~~G 34 (93)
T d1x5ua1 14 VGGLDEKVSEPLLWELFLQAG 34 (93)
T ss_dssp EECCCTTCCHHHHHHHHHTTS
T ss_pred EeCCCCcCCHHHHHHHHHHhC
Confidence 338999999999999998754
No 70
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.77 E-value=22 Score=18.15 Aligned_cols=20 Identities=5% Similarity=0.111 Sum_probs=17.1
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+.+++.++|+..|++.
T Consensus 13 V~nLp~~~te~~l~~~F~~~ 32 (101)
T d2cpea1 13 VQGLNDSVTLDDLADFFKQC 32 (101)
T ss_dssp EECCCTTCCHHHHHHHHTTT
T ss_pred EECCCCcCCHHHHHHHHHHC
Confidence 45899999999999988764
No 71
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=20.63 E-value=39 Score=18.27 Aligned_cols=21 Identities=5% Similarity=0.132 Sum_probs=17.9
Q ss_pred hhccCCCCCHHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRLS 58 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l~ 58 (89)
|=||+.+++.++|++.|.+.-
T Consensus 47 V~nLp~~~te~~l~~~F~~~G 67 (139)
T d1u6fa1 47 VNYIPTTVDEVQLRQLFERYG 67 (139)
T ss_dssp EESCSTTCCHHHHHHHHHHHS
T ss_pred EeCCCCCCCHHHHHHHHHhhc
Confidence 458999999999999998763
No 72
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.59 E-value=24 Score=17.65 Aligned_cols=24 Identities=8% Similarity=-0.027 Sum_probs=19.4
Q ss_pred hccCCCCCHHHHHHHHHHHHHhhC
Q psy3538 39 LQVGSEATQNEIKASYYRLSKLYH 62 (89)
Q Consensus 39 Lgv~~~a~~~~Ik~ayr~l~~~~H 62 (89)
=||+.+++.++|++-|.+......
T Consensus 7 gNLp~~~te~~l~~~F~~~g~~~~ 30 (90)
T d1u2fa_ 7 GNIPFGITEEAMMDFFNAQMRLGG 30 (90)
T ss_dssp CSCCTTCCTTHHHHHHHHHHTTTT
T ss_pred cCCCCccchHHHHHHHHhhCcEEE
Confidence 378899999999999988765443
No 73
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.43 E-value=44 Score=16.98 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=16.3
Q ss_pred CCCHHHHHHHHHHHHHhhC
Q psy3538 44 EATQNEIKASYYRLSKLYH 62 (89)
Q Consensus 44 ~a~~~~Ik~ayr~l~~~~H 62 (89)
+.+..+|.+.|+.+.+...
T Consensus 73 ~i~~~~i~k~~k~i~~~L~ 91 (95)
T d1vola1 73 RISKKEIGRCFKLILKALE 91 (95)
T ss_dssp CSCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHC
Confidence 3689999999999998764
No 74
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.32 E-value=22 Score=17.88 Aligned_cols=20 Identities=10% Similarity=0.232 Sum_probs=16.1
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+.+++.++|+..|.+.
T Consensus 10 V~nLp~~~te~~L~~~F~~~ 29 (88)
T d1wf0a_ 10 VGRCTGDMTEDELREFFSQY 29 (88)
T ss_dssp EESCCSSSCHHHHHHHSTTT
T ss_pred EeCCCCCCCHHHHHHHHHHc
Confidence 34788999999999988653
No 75
>d1coja2 d.44.1.1 (A:91-212) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]}
Probab=20.27 E-value=50 Score=18.10 Aligned_cols=20 Identities=30% Similarity=0.664 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHhhCC
Q psy3538 70 EAAAKKFREITAAYEVLGEF 89 (89)
Q Consensus 70 ~~~~~~f~~i~~Ay~~L~d~ 89 (89)
+.++++|+.-.++++.|.+|
T Consensus 101 ~~v~~r~~~A~~~~~~~~~~ 120 (122)
T d1coja2 101 DVVNERFEKAMKAYEALKDF 120 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 56899999999999999876
No 76
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.26 E-value=16 Score=19.10 Aligned_cols=21 Identities=19% Similarity=0.115 Sum_probs=17.0
Q ss_pred hhhhccCCCCCHHHHHHHHHH
Q psy3538 36 YSHLQVGSEATQNEIKASYYR 56 (89)
Q Consensus 36 y~iLgv~~~a~~~~Ik~ayr~ 56 (89)
--|=||+.+++.++|+..|..
T Consensus 18 v~v~nLp~~~te~dl~~~F~~ 38 (102)
T d1weza_ 18 VHMRGLPYRATENDIYNFFSP 38 (102)
T ss_dssp EEEESCCTTCCHHHHHHSSCS
T ss_pred EEEeCCCCcCCHHHHHHHHhc
Confidence 345589999999999987753
No 77
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.25 E-value=33 Score=17.37 Aligned_cols=18 Identities=11% Similarity=0.158 Sum_probs=15.8
Q ss_pred ccCCCCCHHHHHHHHHHH
Q psy3538 40 QVGSEATQNEIKASYYRL 57 (89)
Q Consensus 40 gv~~~a~~~~Ik~ayr~l 57 (89)
||+.+++.++|+..|.+.
T Consensus 14 nlp~~~te~~l~~~F~~~ 31 (93)
T d1h2vz_ 14 NLSFYTTEEQIYELFSKS 31 (93)
T ss_dssp SCCTTCCHHHHHHHHGGG
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 789999999999998764
No 78
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.16 E-value=33 Score=17.11 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=16.4
Q ss_pred hhccCCCCCHHHHHHHHHHH
Q psy3538 38 HLQVGSEATQNEIKASYYRL 57 (89)
Q Consensus 38 iLgv~~~a~~~~Ik~ayr~l 57 (89)
|=||+.+.+.++|+..|.+.
T Consensus 10 V~nLp~~~te~~l~~~F~~~ 29 (89)
T d2cqba1 10 VGGLAEEVDDKVLHAAFIPF 29 (89)
T ss_dssp EESCCSSCCHHHHHHHHTTT
T ss_pred EeCCCCcCCHHHHHHHHhhC
Confidence 34789999999999988764
No 79
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=20.10 E-value=17 Score=17.49 Aligned_cols=34 Identities=6% Similarity=0.021 Sum_probs=19.5
Q ss_pred CcccChhhhhccCCCCCHHHHHHHHHHHHHhhCC
Q psy3538 30 QAKVNYYSHLQVGSEATQNEIKASYYRLSKLYHP 63 (89)
Q Consensus 30 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HP 63 (89)
.+..+-=+.||++.++-..-+.++-+++....-|
T Consensus 35 ~s~~eIA~~lgis~~tv~~~l~ra~~~Lr~~l~p 68 (68)
T d1or7a1 35 LSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP 68 (68)
T ss_dssp CCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHHHHHHHHcCC
Confidence 3444555667776665555566665555554443
Done!