Query psy3539
Match_columns 315
No_of_seqs 214 out of 879
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 19:14:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1640|consensus 100.0 2.7E-65 5.9E-70 465.4 23.4 293 12-315 5-303 (304)
2 PLN03164 3-oxo-5-alpha-steroid 100.0 2.5E-64 5.4E-69 471.3 22.6 263 44-315 21-322 (323)
3 KOG1638|consensus 100.0 2.7E-49 5.8E-54 352.7 21.4 223 49-315 34-256 (257)
4 PLN02560 enoyl-CoA reductase 100.0 2.4E-47 5.1E-52 360.5 21.2 177 123-315 125-308 (308)
5 PLN02392 probable steroid redu 100.0 3.5E-45 7.7E-50 336.0 25.6 223 49-315 32-259 (260)
6 PF02544 Steroid_dh: 3-oxo-5-a 100.0 1.1E-40 2.4E-45 285.6 16.4 149 154-315 1-149 (150)
7 KOG1639|consensus 100.0 2.2E-40 4.7E-45 296.1 12.4 180 122-315 116-297 (297)
8 PF06966 DUF1295: Protein of u 99.1 3.6E-10 7.9E-15 103.7 10.3 69 198-270 117-185 (235)
9 COG3752 Steroid 5-alpha reduct 99.0 3.3E-10 7.1E-15 102.9 6.4 112 199-315 147-266 (272)
10 PF04191 PEMT: Phospholipid me 98.6 4.7E-07 1E-11 72.3 11.5 103 201-304 2-106 (106)
11 PF01222 ERG4_ERG24: Ergostero 98.1 7.1E-06 1.5E-10 81.7 8.5 113 203-315 305-431 (432)
12 KOG4650|consensus 98.1 3.5E-05 7.6E-10 70.4 11.1 73 198-270 173-245 (311)
13 COG2020 STE14 Putative protein 98.0 6.5E-05 1.4E-09 66.7 10.6 115 199-315 67-185 (187)
14 KOG1435|consensus 97.6 0.00011 2.5E-09 71.8 5.6 110 206-315 304-427 (428)
15 PF04140 ICMT: Isoprenylcystei 96.9 0.015 3.3E-07 45.9 10.2 61 207-268 3-63 (94)
16 COG1755 Uncharacterized protei 95.5 0.13 2.9E-06 44.6 9.6 97 199-296 68-165 (172)
17 KOG2628|consensus 94.9 0.11 2.4E-06 46.2 7.5 80 235-315 117-200 (201)
18 PLN02797 phosphatidyl-N-dimeth 76.5 12 0.00027 32.2 7.0 75 203-285 67-145 (164)
19 PF13789 DUF4181: Domain of un 67.0 13 0.00029 29.9 5.1 56 238-293 14-80 (110)
20 PF15050 SCIMP: SCIMP protein 54.2 22 0.00047 29.4 4.1 41 13-56 2-42 (133)
21 PF07298 NnrU: NnrU protein; 30.5 1.7E+02 0.0037 26.0 6.4 65 245-313 96-163 (191)
No 1
>KOG1640|consensus
Probab=100.00 E-value=2.7e-65 Score=465.37 Aligned_cols=293 Identities=31% Similarity=0.477 Sum_probs=251.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHhhHHHhhhCCCCCCCCCcc-ceeeeEecccchhhHHHHHHHHHHHHHH
Q psy3539 12 DLNIIQATFLLLTLAIVIVGSLINSLEKHLPKCLIQSFRYGKFALDIRHST-FVAHLEVPKRYFQHFYIFSSLLSTMAFY 90 (315)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~YGK~~~~~~~~~-~~~~~~VPk~wF~HFYv~~~~~~~~~l~ 90 (315)
.+|++|..|+...+++++.+.+..++++++|++++++++|||+....+.++ ..+++|||||||+|||++|++||.++++
T Consensus 5 ~vn~~~~~~lt~~a~~~~~l~l~~~i~~~lps~~~~ll~YGk~~~~~~~~p~~~~kf~VPK~wF~HFY~i~vlw~~l~l~ 84 (304)
T KOG1640|consen 5 LLNLLRALWLTVVAAYLLSLTLFVLICSLLPSSLPWLLRYGKHDNFGEKSPLLVTKFTVPKRWFSHFYAIGVLWNPLLLY 84 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHhcccCCCCCCCHHHhHhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999966666777888899999999999999987765444 6789999999999999999999999999
Q ss_pred HHHHHhhcCcccchhHHHHHHHhcccCcccC----CCccHHHHHHHHHHHHhhhheeeeeceeccC-CCCccHHHHHHHH
Q psy3539 91 LCVKTYVLGYEVSPSVMSFLDLLGGSQRRAT----TSATSVFLCIFLITLQCYRRLYETSCVSVFS-DSRINISHYIIGH 165 (315)
Q Consensus 91 ~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~----~~~~~~~l~~~l~~iH~~rRl~Etlfv~~fS-~s~M~l~~~~~G~ 165 (315)
.+.+..+.+. .|++...+++++...+-+.. .......+.+.+...|..||+||++|+.+++ +|||+++||+.|.
T Consensus 85 ~~~~~~~~~~-~~~~~h~fl~~~~~~~~~~~e~~~~~~~~~~~~~l~~s~~~~rrlYet~fv~~~~~~s~mnl~hy~vg~ 163 (304)
T KOG1640|consen 85 FLLSTNFPIA-MPSVEHRFLVILGVFIFKNIEEDLMYSLTLQVLLLIYSLHTLRRLYETLFVLVYSVNSKMNLGHYLVGY 163 (304)
T ss_pred HHHHhhcCcC-chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeeeccccchhhHHHHH
Confidence 9987665554 78888888887775442211 2344556677789999999999999999998 4999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCc
Q psy3539 166 LHYFGTVCGMLVEAPGFTRPSFEHRTSLDLKDLNVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGL 245 (315)
Q Consensus 166 ~fY~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~ggl 245 (315)
++|.+...++..+..+...+ + ......++.+++|.++|++|+++|++||.||+|+||++- .+++|.||+|||
T Consensus 164 V~y~vl~~~l~~~~~g~~~~--~----~~~~l~~i~q~~g~~iF~i~s~~Qy~~h~iL~nlrk~~~--~~~~~~ip~g~~ 235 (304)
T KOG1640|consen 164 VFYTVLSLALLLCTNGSSEG--P----NFNSLSSILQWLGLGIFAIGSIHQYASHEILGNLRKYPR--QAKAYLIPKGGW 235 (304)
T ss_pred HHHHHHHHHHHHhhcccccC--c----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hhhheecCCCCE
Confidence 99999999888877665433 1 111123568999999999999999999999999999852 467899999999
Q ss_pred ccccccchhhHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCccccccCC
Q psy3539 246 FNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYWVISNQFETSLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 246 F~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~v~~nl~~~A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
|++||||||++||++|.|++... ++.+.|+++.||++||+.+|.+||+||++||+ |||++|+|+|||+
T Consensus 236 F~~Vs~Ph~L~Ei~iY~~ia~~~-~~~~iwLv~~~V~~N~t~aA~~Th~wY~~kF~-~yp~~R~AiiPfl 303 (304)
T KOG1640|consen 236 FKLVSCPHYLAEIIIYVGIALGA-PDLTIWLVFGWVAANLTYAALETHRWYLKKFE-NYPKNRHAIIPFL 303 (304)
T ss_pred eeecCChHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCccccccccccc
Confidence 99999999999999999977766 68999999999999999999999999999999 9999999999996
No 2
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Probab=100.00 E-value=2.5e-64 Score=471.26 Aligned_cols=263 Identities=25% Similarity=0.473 Sum_probs=210.5
Q ss_pred hhHHHhhhCCCCCCCCCccceeeeEecccchhhHHHHHHHHHHHHHHHHH-HHhhcCc--ccchhHHHHHHHhcccCcc-
Q psy3539 44 CLIQSFRYGKFALDIRHSTFVAHLEVPKRYFQHFYIFSSLLSTMAFYLCV-KTYVLGY--EVSPSVMSFLDLLGGSQRR- 119 (315)
Q Consensus 44 ~~~~l~~YGK~~~~~~~~~~~~~~~VPk~wF~HFYv~~~~~~~~~l~~~~-~~~~~~~--~~p~~~~~~l~~l~~~~~~- 119 (315)
++..+.+.||+.++. .+++|||+|||+|||++|++|+++++...+ +++.... +-|....++.+.+.++++.
T Consensus 21 ~~~~~~~rgk~~~~~-----~~~~tvpq~~f~hfy~~~~~~~t~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~g~~~~~ 95 (323)
T PLN03164 21 LVLGFARRGKILHSS-----SQKFTVPQRFFSHFYVVGVVWTTLLLAATWLYAYKMAPLSSEEFQYSDIASQLAGGSHIF 95 (323)
T ss_pred HHHHHhhcCCccccc-----ccccccchhhhhheeehHHHHHHHHHHHHHHHHHHhCcCCCccchhHHHHHHhcCCccee
Confidence 455568999998742 378999999999999999999999987755 4443321 1133456666666664411
Q ss_pred -----------cCCCccHHHHHHHHHHHHhhhheeeeeceeccCC-CCccHHHHHHHHHHHHHHHHHHhhhcCCCCCC--
Q psy3539 120 -----------ATTSATSVFLCIFLITLQCYRRLYETSCVSVFSD-SRINISHYIIGHLHYFGTVCGMLVEAPGFTRP-- 185 (315)
Q Consensus 120 -----------~~~~~~~~~l~~~l~~iH~~rRl~Etlfv~~fS~-s~M~l~~~~~G~~fY~~~~~~i~~~~~~~~~~-- 185 (315)
..+..++..++++|+++|++||+|||+||++||+ +|||++||++|++||++++++++.+.++....
T Consensus 96 ~~~~~~~~~~~~~~~~w~~~~~l~L~~lq~lRRLyEslfVskfS~~SrMhl~hYlvGl~fY~~~~lsl~~~~~~~~~~~~ 175 (323)
T PLN03164 96 SFHKSRSTPVEHRYRVWRSVFLLLLMEIHVLRRLYESLYVFKYSPSARMHILGYLTGLFFYVAAPLSLCCNCAPEVAKFV 175 (323)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHheeeEEecCCcceeeHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 1123557889999999999999999999999997 89999999999999999999998776532110
Q ss_pred -------------Cccccccc-------cccchhHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCc
Q psy3539 186 -------------SFEHRTSL-------DLKDLNVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGL 245 (315)
Q Consensus 186 -------------~~~~~~~~-------~~~~~~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~ggl 245 (315)
...+ .+. +..+.++.+++|+++|++|+++|++||.+|++||+++ ..+++|+||+|||
T Consensus 176 ~~~~~~~~v~g~~~~~~-~~~~~~~~~~~~~~l~~~q~iGl~lFlig~~~n~~~H~iLa~LR~~k--~~~~~Y~IP~Ggl 252 (323)
T PLN03164 176 GNQVAEFIVKGKSAMSA-IEFDWWDFVSPLMKLGWFQWIGAAIFLWGWIHQYRCHAILGSLREHK--KQADEYVIPYGDW 252 (323)
T ss_pred cccchhhcccccccccc-cccchHhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCC--CCCceEECCCCCC
Confidence 0000 000 1112346679999999999999999999999999642 1367899999999
Q ss_pred ccccccchhhHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCccccccCC
Q psy3539 246 FNFVSSPHLFCEALIYLSLYLILY-NNNTFAYVFYWVISNQFETSLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 246 F~~VscPhY~~Eiliy~~~al~~~-~~~~~~~~~~~v~~nl~~~A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
|++||||||++||++|+|++++++ .+.+++++++||++||+++|.+||+||+|||+ ||||+||||||||
T Consensus 253 F~~VSCPHYf~EIliw~gfal~t~~~~~~~~l~~~~v~~nL~~~A~~tHkWY~kkF~-dYPk~RkAIIPfI 322 (323)
T PLN03164 253 FEMVSCPHYLAEIVIYAGLLIASGGTDLTIWLLFGFVVANLTFAAAETHRWYLQKFE-NYPRNRYAIIPFV 322 (323)
T ss_pred cCeEcCCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccCceEecCcc
Confidence 999999999999999999999984 35677888899999999999999999999998 9999999999997
No 3
>KOG1638|consensus
Probab=100.00 E-value=2.7e-49 Score=352.72 Aligned_cols=223 Identities=20% Similarity=0.286 Sum_probs=181.9
Q ss_pred hhhCCCCCCCCCccceeeeEecccchhhHHHHHHHHHHHHHHHHHHHhhcCcccchhHHHHHHHhcccCcccCCCccHHH
Q psy3539 49 FRYGKFALDIRHSTFVAHLEVPKRYFQHFYIFSSLLSTMAFYLCVKTYVLGYEVSPSVMSFLDLLGGSQRRATTSATSVF 128 (315)
Q Consensus 49 ~~YGK~~~~~~~~~~~~~~~VPk~wF~HFYv~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~~ 128 (315)
..|||.+++.++ ++..||-+- +|.+ ++.|++.+++..+-.++++. .....
T Consensus 34 s~yGr~s~s~~~----~~~~ip~~~---------------aw~i-------qe~Paf~~pl~~~~~~~~~~----~~~~~ 83 (257)
T KOG1638|consen 34 SGYGRHSSSLNP----TKTRIPPRI---------------AWFI-------QELPAFAIPLYSLFRGPSSD----LPPGL 83 (257)
T ss_pred cCCceecCCCcc----hhcCCCchh---------------HHHH-------hcCcHHHhhHHHhcCCCccc----ccccH
Confidence 899999765433 234477664 3332 56788888876655443321 13356
Q ss_pred HHHHHHHHHhhhheeeeeceeccCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccccccchhHHHHHHHHH
Q psy3539 129 LCIFLITLQCYRRLYETSCVSVFSDSRINISHYIIGHLHYFGTVCGMLVEAPGFTRPSFEHRTSLDLKDLNVYVLLCACV 208 (315)
Q Consensus 129 l~~~l~~iH~~rRl~Etlfv~~fS~s~M~l~~~~~G~~fY~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 208 (315)
++..++++||.+|.+|.+|.++.| ++||+...+++..|+..||.+.......+.....+ +. .+++..+|+.+
T Consensus 84 ~L~~~flvHYf~R~liypf~~~~~-~~~p~~i~a~a~~F~~~NG~lqg~y~~~~~~~~d~----~~---~~~r~liG~~l 155 (257)
T KOG1638|consen 84 LLLSAFLVHYFHRALIYPFLIRSS-NPSPAIIVALAIAFCTLNGTLQGLYLSHYQLYEDP----WV---TDIRFLIGVVL 155 (257)
T ss_pred HHHHHHHHHHHHHHHhheeeecCC-CCccHHHHHHHHHHHHhhHHHHHHHHHhcccccCC----Cc---hhHHHHHHHHH
Confidence 788899999999999999999854 88999999999999999998744332221111111 11 25789999999
Q ss_pred HHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q psy3539 209 FLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYWVISNQFET 288 (315)
Q Consensus 209 F~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~v~~nl~~~ 288 (315)
|+.|+.+|+++|.+|++|||+ | +++|+||+||||||||||||++||++|+|+++++ ++.+.+.+++++++||++|
T Consensus 156 fv~Gm~iN~~sD~iL~~LRk~-~---~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~-ws~p~~aFa~ft~~~l~pR 230 (257)
T KOG1638|consen 156 FVTGMLINIYSDNILRTLRKP-G---GKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALAS-WSLPALAFAFFTICNLGPR 230 (257)
T ss_pred HHHHhhhhhhhHHHHHHhhcC-C---CCceecCCCceEEEeecchHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999 4 6789999999999999999999999999999998 5899999999999999999
Q ss_pred HHHHHHHHHHhccccCCCCccccccCC
Q psy3539 289 SLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 289 A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
|.++|+||++||+ ||||+|||+||||
T Consensus 231 A~ahH~WY~~kFe-~YPk~RkAlIPfv 256 (257)
T KOG1638|consen 231 AYAHHKWYLKKFE-DYPKNRKALIPFV 256 (257)
T ss_pred HHHHHHHHHHhhc-cCCccceeecccc
Confidence 9999999999997 9999999999997
No 4
>PLN02560 enoyl-CoA reductase
Probab=100.00 E-value=2.4e-47 Score=360.47 Aligned_cols=177 Identities=18% Similarity=0.195 Sum_probs=153.8
Q ss_pred CccHHHHHHHHHHHHhhhheeeeeceeccCCCCccHHHHHHHHHHHHHHHHHHh--hhcCCCCCCCccccccccccchhH
Q psy3539 123 SATSVFLCIFLITLQCYRRLYETSCVSVFSDSRINISHYIIGHLHYFGTVCGML--VEAPGFTRPSFEHRTSLDLKDLNV 200 (315)
Q Consensus 123 ~~~~~~l~~~l~~iH~~rRl~Etlfv~~fS~s~M~l~~~~~G~~fY~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
.+..+.++++|+++||+||++||+|||+||+++||+.++++||+|||+++..+. .+.+.+. + ..+.
T Consensus 125 ~~~~~~l~~~~~~~Hy~kR~~Et~fvhrfS~~tmpl~n~~~n~~~Yw~~~~~~~y~~~~~~~~----~--------~~~~ 192 (308)
T PLN02560 125 IHPVQTYAMYYWCFHYAKRILETFFVHRFSHATSPLFNVFRNCAYYWTFGAYIAYFVNHPLYT----P--------VSET 192 (308)
T ss_pred CchHHHHHHHHHHHHHHHHhhheeeeEeecCCCccHHHHHHHHHHHHHHHHHHhhhcccCCcc----c--------cchh
Confidence 356789999999999999999999999999999999999999999999975432 2222111 0 0134
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHHH
Q psy3539 201 YVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYW 280 (315)
Q Consensus 201 ~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~ 280 (315)
+.++|+++|++|+..|++||.+|++|||++| +++|+||+||+|++||||||++|+++|+|++++++ +.++++++++
T Consensus 193 ~~~~g~~lf~~~~~~N~~~h~~L~~LR~~~g---~~~y~IP~g~lF~~VscPnY~~Ei~~W~gf~~~t~-~~~~~~F~~~ 268 (308)
T PLN02560 193 QMKVGFGFGLVCQLANFYCHIILRNLRKPDG---KGGYQIPRGFLFNYVTCANYTTEIYQWLGFNIATQ-TVAGYLFLAV 268 (308)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCCeeCCCCCCcCeecCCcHHHHHHHHHHHHHHHc-cHHHHHHHHH
Confidence 6689999999999999999999999999634 67899999999999999999999999999999995 7888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-----cCCCCccccccCC
Q psy3539 281 VISNQFETSLLNHWWYQSKFTR-----QYPASRKAFIPYL 315 (315)
Q Consensus 281 v~~nl~~~A~~~h~wY~~kF~~-----~Yp~~RkalIPfI 315 (315)
+++||.+||.++||||++||+| +|||+|++++||+
T Consensus 269 ~~~~m~~wA~~kh~~Y~k~F~d~~~~~~yp~~~~~~pp~~ 308 (308)
T PLN02560 269 AAAIMTNWALAKHRRLKKLFDGKDGRPKYPRRWVILPPFL 308 (308)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccccccCCCceEeCCCcC
Confidence 9999999999999999999985 5999888888875
No 5
>PLN02392 probable steroid reductase DET2
Probab=100.00 E-value=3.5e-45 Score=335.97 Aligned_cols=223 Identities=22% Similarity=0.263 Sum_probs=178.8
Q ss_pred hhhCCCCCCCCCccceeeeEecccchhhHHHHHHHHHHHHHHHHHHHhhcCcccchhHHHHHHHhcccCcccCCCccHHH
Q psy3539 49 FRYGKFALDIRHSTFVAHLEVPKRYFQHFYIFSSLLSTMAFYLCVKTYVLGYEVSPSVMSFLDLLGGSQRRATTSATSVF 128 (315)
Q Consensus 49 ~~YGK~~~~~~~~~~~~~~~VPk~wF~HFYv~~~~~~~~~l~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~~ 128 (315)
..|||..+++ ..++||-|- .|.+ +|.|+.+..+.....+++. ......
T Consensus 32 apYGk~~~~~------~g~~vp~rl---------------aW~l-------mE~P~~~~~~~~~~~~~~~----~~~~~~ 79 (260)
T PLN02392 32 APYGKHNRLG------WGPTVSPPL---------------AWFL-------MESPTLWLTLLLFPLGQHF----TNPKAL 79 (260)
T ss_pred cCcCCCCCCC------CCcCCCchH---------------HHHH-------hhccHHHHHHHHHhcCccc----cccHHH
Confidence 6799997542 256788764 3332 5778887776544433321 233466
Q ss_pred HHHHHHHHHhhhheeeeeceeccCC-----CCccHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccccccchhHHHH
Q psy3539 129 LCIFLITLQCYRRLYETSCVSVFSD-----SRINISHYIIGHLHYFGTVCGMLVEAPGFTRPSFEHRTSLDLKDLNVYVL 203 (315)
Q Consensus 129 l~~~l~~iH~~rRl~Etlfv~~fS~-----s~M~l~~~~~G~~fY~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
+..+++++||++|.+..++..+.|. ++||+...++|+.|++.|+.........+.+ .+. +++. ..++.+
T Consensus 80 vl~~lf~~HY~~Ra~i~Pl~~~~~~~~~~~~p~p~~i~~~a~~F~~~Ng~lq~~wl~~~~~-~y~--~~~~---~~~~~~ 153 (260)
T PLN02392 80 LLMSPYLLHYFHRTCIYPLRLYRSTSQQNTKGFPVSMALLAFGFNLLNAYLQARWVSHYKD-DYE--DGGW---FWWRFF 153 (260)
T ss_pred HHHHHHHHHHHhHHHhhhhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhccCC-cCC--Cccc---ccHHHH
Confidence 7788999999999999998766542 3799999999999999999876554433322 222 1111 134788
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q psy3539 204 LCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYWVIS 283 (315)
Q Consensus 204 ~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~v~~ 283 (315)
+|+++|++|+.+|++||.+|++|||+ | ++|+||+||+|++||||||++||++|+|++++++ +++.+.+++++++
T Consensus 154 iG~~lF~~g~~~N~~sh~~L~~LRk~-g----~~Y~iP~GGlF~~VscPnYf~EileW~gfal~t~-s~~~~~F~~~~~~ 227 (260)
T PLN02392 154 GGLVVFLWGMRINVWSDRVLVGLKRE-G----GGYKVPRGGWFELVSCPNYFGEIVEWLGWAVMTW-SWAGFGFFLYTCS 227 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccC-C----CeeECCCCCCcCeEcCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 99999999999999999999999997 4 5899999999999999999999999999999985 7888889999999
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCccccccCC
Q psy3539 284 NQFETSLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 284 nl~~~A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
||.+||.++||||+|||||||||+|||+||||
T Consensus 228 nl~~rA~~~hkwY~~kFg~~ypk~RkaiIPfi 259 (260)
T PLN02392 228 NLVPRACANHKWYLEKFGEDYPKGRKAVIPFL 259 (260)
T ss_pred HHHHHHHHHHHHHHHHccccccCCCeEecCcc
Confidence 99999999999999999879999999999997
No 6
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1.3.99.5 from EC catalyse the conversion of 3-oxo-5-alpha-steroid + acceptor to 3-oxo-delta(4)-steroid + reduced acceptor. The steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during foetal development []. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related steroid reductase enzyme, DET2, is found in plants such as Arabidopsis. Mutations in this enzyme cause defects in light-regulated development []. This domain is present in both type 1 and type 2 forms.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006629 lipid metabolic process, 0005737 cytoplasm, 0016021 integral to membrane
Probab=100.00 E-value=1.1e-40 Score=285.55 Aligned_cols=149 Identities=26% Similarity=0.450 Sum_probs=127.5
Q ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCc
Q psy3539 154 SRINISHYIIGHLHYFGTVCGMLVEAPGFTRPSFEHRTSLDLKDLNVYVLLCACVFLWAWVNQYNSARILSELRKKRGLV 233 (315)
Q Consensus 154 s~M~l~~~~~G~~fY~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~ 233 (315)
.+||+++.++|+.|++++|..+.......... + .++. .+++.++|+++|++|+..|++||.+|++||++ |
T Consensus 1 ~~mpi~~~~~~~~f~~~ng~l~~~~~~~~~~~--~--~~~~---~~~~~~~g~~lf~~g~~~n~~~h~~L~~lr~~-~-- 70 (150)
T PF02544_consen 1 NTMPISNVFMNCFFWVLNGYLIGYYLSYYAPY--Q--YTWL---PSPRFIIGLALFLIGSIGNFYSHLILANLRKP-G-- 70 (150)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhcCCcc--c--ccch---hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c--
Confidence 48999999999998888876544332211111 1 1111 24678999999999999999999999999998 4
Q ss_pred cccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCcccccc
Q psy3539 234 VTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYWVISNQFETSLLNHWWYQSKFTRQYPASRKAFIP 313 (315)
Q Consensus 234 ~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~v~~nl~~~A~~~h~wY~~kF~~~Yp~~RkalIP 313 (315)
+++|+||+||+||+||||||++|+++|+|++++++ +.+.+.+++|+++||.+||.++|+||++||+ |||++|||+||
T Consensus 71 -~~~y~iP~gg~F~~vscP~Y~~Eil~w~~f~l~~~-~~~~~~f~~~~~~~l~~~A~~~h~wY~~~F~-~yp~~R~~lIP 147 (150)
T PF02544_consen 71 -SKKYKIPKGGLFEYVSCPHYFFEILIWIGFALLTG-SWPSYAFALFVVVNLSPRAVQTHRWYKKKFK-EYPKNRKALIP 147 (150)
T ss_pred -CCceeCCCCCCcceeeehhhHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHCc-cccCCCeEecC
Confidence 67899999999999999999999999999999985 7888889999999999999999999999997 99999999999
Q ss_pred CC
Q psy3539 314 YL 315 (315)
Q Consensus 314 fI 315 (315)
||
T Consensus 148 fi 149 (150)
T PF02544_consen 148 FI 149 (150)
T ss_pred cc
Confidence 97
No 7
>KOG1639|consensus
Probab=100.00 E-value=2.2e-40 Score=296.09 Aligned_cols=180 Identities=24% Similarity=0.302 Sum_probs=156.4
Q ss_pred CCccHHHHHHHHHHHHhhhheeeeeceeccCCCCccHHHHHHHHHHHHHHHHH--HhhhcCCCCCCCccccccccccchh
Q psy3539 122 TSATSVFLCIFLITLQCYRRLYETSCVSVFSDSRINISHYIIGHLHYFGTVCG--MLVEAPGFTRPSFEHRTSLDLKDLN 199 (315)
Q Consensus 122 ~~~~~~~l~~~l~~iH~~rRl~Etlfv~~fS~s~M~l~~~~~G~~fY~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
..+..+.++..++++||.||++||+|||+||.++||+.+...+|.|||.++.. ..+++|.+.++.+. .
T Consensus 116 ~i~~~~~iA~~~~~~Hy~KRl~ET~FvhrFs~atmp~~nlfKnC~~yw~~~~~vaYfvnhp~~t~~~~~----------~ 185 (297)
T KOG1639|consen 116 VIHPLQRIAFFLWLFHYGKRLLETIFVHRFSLATMPIFNLFKNCFYYWGFSALVAYFVNHPLFTPPKLG----------K 185 (297)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHhhHHHHHHHHHHHHHhcCCCCCCcchh----------h
Confidence 35677899999999999999999999999999999999999999999999853 45666665543322 2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHH
Q psy3539 200 VYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFY 279 (315)
Q Consensus 200 ~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~ 279 (315)
.+..+|++.|++++..|++||..|++||.+ |+. ..++-+|+|.+|++||||||+.|+..|++|+++++ +++.++++.
T Consensus 186 ~~~~~~l~~fv~~el~NF~~HI~LR~lrp~-g~k-~r~ip~~~g~lFnlvscpNYt~Ev~sWi~F~i~tq-~l~a~lFl~ 262 (297)
T KOG1639|consen 186 LQVKLGLGGFVLCELGNFSCHILLRNLRPA-GSK-KRRIPLPDGFLFNLVSCPNYTYEVGSWIGFAIMTQ-CLAAYLFLT 262 (297)
T ss_pred hhhhhhhHHHhhhhhcceeeEeehhhccCC-cCc-cceeecCCccEEEEEecCCcceehHHHHHHHHHHH-HHHHHHHHH
Confidence 356789999999999999999999999988 521 33445557778999999999999999999999995 688888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCccccccCC
Q psy3539 280 WVISNQFETSLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 280 ~v~~nl~~~A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
-..++|..||..+|+.|+|+|+ |||++|+.||||+
T Consensus 263 vg~aqMtiWA~~Kh~~ylKeFp-~Ypr~r~~iiPFv 297 (297)
T KOG1639|consen 263 VGAAQMTIWAKGKHRRYLKEFP-DYPRRRKIIIPFV 297 (297)
T ss_pred HHHHHHHHHHHhhhHhHhhhcc-cCCccccccCCCC
Confidence 8899999999999999999999 9999999999996
No 8
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=99.12 E-value=3.6e-10 Score=103.68 Aligned_cols=69 Identities=22% Similarity=0.366 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhc
Q psy3539 198 LNVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYN 270 (315)
Q Consensus 198 ~~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~ 270 (315)
.++..++|+++|++|...+..+|.++.+.|+++ +++.++.+.|+|+|+.+|||++|++.|.|+++++..
T Consensus 117 ~~~~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~----~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~ 185 (235)
T PF06966_consen 117 LNWLDILGIALFLIGFLLETVADQQKYRFKKDP----ANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAIS 185 (235)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc----ccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHh
Confidence 356778999999999999999999999999874 334579999999999999999999999999998843
No 9
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only]
Probab=99.04 E-value=3.3e-10 Score=102.88 Aligned_cols=112 Identities=18% Similarity=0.230 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhch-hhHH--
Q psy3539 199 NVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNN-NTFA-- 275 (315)
Q Consensus 199 ~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~-~~~~-- 275 (315)
.+..++|+++|++|...+.-.|.||-+.||+| .+++++-+-|+|++..+||||+|.+.|.|+.+++... ...|
T Consensus 147 ~~~d~~g~~iwivg~~fE~lgD~QL~~Fk~~P----~nkgkll~~GLWr~tRHPNYFgE~l~Wwg~~Lia~~~~~~~W~~ 222 (272)
T COG3752 147 GWWDVIGLAIWIVGIVFEALGDAQLWVFKKDP----RNKGKLLDTGLWRWTRHPNYFGEALVWWGFYLIAISEWLLLWAV 222 (272)
T ss_pred cHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCh----hhccccccccceecccCcchHHHHHHHHHHHHHHHhhhhHhhhc
Confidence 56778999999999999999999999999996 5677999999999999999999999999999987421 1111
Q ss_pred -HHHHH----HHHHHHHHHHHHHHHHHHhccccCCCCccccccCC
Q psy3539 276 -YVFYW----VISNQFETSLLNHWWYQSKFTRQYPASRKAFIPYL 315 (315)
Q Consensus 276 -~~~~~----v~~nl~~~A~~~h~wY~~kF~~~Yp~~RkalIPfI 315 (315)
..+++ +.+.=.++-.|+..--|++|+ +|-++..++.|++
T Consensus 223 ~sPllmt~LL~~vSGvp~l~ekm~k~r~~fr-~Yq~rt~~F~P~~ 266 (272)
T COG3752 223 ASPLLMTWLLVHVSGVPPLEEKMLKSRPGFR-EYQRRTNAFFPRP 266 (272)
T ss_pred ccHHHHHHHHHHhcCCChHHHHHhcccHhHH-HHHHHhcccCCCC
Confidence 11111 111112223333333447888 8999999999985
No 10
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=98.64 E-value=4.7e-07 Score=72.32 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhccccCCCc-cccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhH-HHHH
Q psy3539 201 YVLLCACVFLWAWVNQYNSARILSELRKKRGLV-VTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTF-AYVF 278 (315)
Q Consensus 201 ~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~-~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~-~~~~ 278 (315)
+.++|+++++.|......+...+..-+...|.. .++.-++-++|.|++|.+|-|++.++.++|.+++.+ |+.. ...+
T Consensus 2 ~~~~G~~l~~~g~~l~~~~~~~l~~~~~~~~~~~~~~~~~Lvt~G~Y~~vRhPmY~g~~l~~~G~~l~~~-s~~~l~~~~ 80 (106)
T PF04191_consen 2 RFVLGLLLILAGIALAIWAFKALGRFGTYYGDFFGREPQRLVTTGPYRYVRHPMYLGFLLILLGIALMLG-SWLGLLLAV 80 (106)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCeecCCcccccCCcccccCCccCcCChHHHHHHHHHHHHHHHhC-cHHHHHHHH
Confidence 567899999999999999988887766542210 022335779999999999999999999999999874 4443 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccC
Q psy3539 279 YWVISNQFETSLLNHWWYQSKFTRQY 304 (315)
Q Consensus 279 ~~v~~nl~~~A~~~h~wY~~kF~~~Y 304 (315)
+..+...........++-+++|+|||
T Consensus 81 ~~~~~~~~~~~~~EE~~L~~~fG~~Y 106 (106)
T PF04191_consen 81 LAFLLYYIFIIRFEERFLERRFGEEY 106 (106)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhCcCC
Confidence 44555555555577888999999887
No 11
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis. They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane
Probab=98.14 E-value=7.1e-06 Score=81.68 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHhccccCC--Cc-------cccccccccCCcccccccchhhHHHHHHHHHHHHhhc-hh
Q psy3539 203 LLCACVFLWAWVNQYNSARILSELRKKRG--LV-------VTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYN-NN 272 (315)
Q Consensus 203 ~~g~~lF~~g~~~q~~~h~~La~LRk~~G--~~-------~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~-~~ 272 (315)
..-.+++++|.+....++.|-.+.|++|. +. .+++-++=..||+.++.+|||++|+++-+++++.++. +.
T Consensus 305 ~~i~~l~~~gy~i~r~sn~QK~~FR~~p~~p~~~~~~~~~t~~G~~LL~SGwWg~~Rh~NY~gdil~a~aw~l~~gf~~~ 384 (432)
T PF01222_consen 305 AAILALGLVGYYIFRGSNSQKNRFRRNPKDPKVIHLKYIPTKRGSKLLVSGWWGIARHPNYLGDILMALAWCLPCGFSSI 384 (432)
T ss_pred HHHHHHHHHHHHHHHHhchhHHHhcCCCCCCcccccceeecCCCCeEEEcChhHhhcccchHHHHHHHHHHHHHHhcCcc
Confidence 33467889999999999999999997641 11 1123345566999999999999999999999988743 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---C-CCCccccccCC
Q psy3539 273 TFAYVFYWVISNQFETSLLNHWWYQSKFTRQ---Y-PASRKAFIPYL 315 (315)
Q Consensus 273 ~~~~~~~~v~~nl~~~A~~~h~wY~~kF~~~---Y-p~~RkalIPfI 315 (315)
..+...+|.++-+.-||.+.++.-++|+|++ | .+-++.+||+|
T Consensus 385 ~pyfy~~~~~~lL~hR~~RD~~rC~~KYG~~W~~Yc~~Vpy~~iP~i 431 (432)
T PF01222_consen 385 LPYFYPIFFTILLIHRARRDEERCRKKYGKDWDEYCKRVPYRIIPGI 431 (432)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhCHHHHHHHHhCCEEEeCCc
Confidence 3455667777889999999999999999844 4 33688999986
No 12
>KOG4650|consensus
Probab=98.09 E-value=3.5e-05 Score=70.41 Aligned_cols=73 Identities=12% Similarity=0.237 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhc
Q psy3539 198 LNVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYN 270 (315)
Q Consensus 198 ~~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~ 270 (315)
.++..++|..+|+.|......+|.++-+.+..+-+..+.+..--.-|+|+|..+|||++|-++|.|+.+.+.+
T Consensus 173 f~~wD~I~~~m~~~gfvie~~ADqQ~~~f~~~~~~l~~~Gk~~~d~GlwrySRHPNylgEqL~Wwglyvfa~~ 245 (311)
T KOG4650|consen 173 FGPWDVIGWTMWVFGFVIEALADQQKLSFKEARYDLENLGKGWCDVGLWRYSRHPNYLGEQLLWWGLYVFAAP 245 (311)
T ss_pred cChHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhcCHHHcCCccccccceeeccCccHHHHHHHHHHHHHHHhh
Confidence 3566789999999999999999999887763210112333346678999999999999999999999998743
No 13
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=6.5e-05 Score=66.69 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHH
Q psy3539 199 NVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVF 278 (315)
Q Consensus 199 ~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~ 278 (315)
.+....|+.++.++...=..++..+.+-... .....+++++=++|.|++|.+|-|++.++.++|..+..+ |+.....+
T Consensus 67 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~LVttG~Y~~VRHP~Y~~~~l~~~g~~~~~~-~~~~l~~~ 144 (187)
T COG2020 67 SWIVGLGLLLVGLGLALRLWAMRTLGRSWTV-SVKARKGHELVTTGPYSIVRHPIYLGLLLFALGTGLLLG-SLWALLIF 144 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc-ccCCCCCCeeEecCCcceecCcHHHHHHHHHHHHHHHHH-hHHHHHHH
Confidence 5667788888888888877777776552111 111245678889999999999999999999999997774 55555444
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhccc---cCCCCccccccCC
Q psy3539 279 YWVISNQ-FETSLLNHWWYQSKFTR---QYPASRKAFIPYL 315 (315)
Q Consensus 279 ~~v~~nl-~~~A~~~h~wY~~kF~~---~Yp~~RkalIPfI 315 (315)
......+ ..++.+..+.-+++|+| ||-++-+..||.+
T Consensus 145 ~~~~~~~~~~~i~~EEr~L~~~fg~~Y~~Y~~rV~r~iP~~ 185 (187)
T COG2020 145 VVLVALLFLFRIREEERYLRAEFGDEYREYRKRVPRLIPPL 185 (187)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHhCCccCCCC
Confidence 4444444 67888888889999985 4677888888863
No 14
>KOG1435|consensus
Probab=97.55 E-value=0.00011 Score=71.83 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhHHHHHHhccccCCCc---------cccccccccCCcccccccchhhHHHHHHHHHHHHhhch-hhHH
Q psy3539 206 ACVFLWAWVNQYNSARILSELRKKRGLV---------VTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNN-NTFA 275 (315)
Q Consensus 206 ~~lF~~g~~~q~~~h~~La~LRk~~G~~---------~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~-~~~~ 275 (315)
.++.+.|......|+.|--..||++|+- .+++-++=.-||+.++..|||++|+++=+++++.++.+ .-..
T Consensus 304 ~~l~l~gyyifr~an~QK~~FRkn~~~~~~~~i~~i~t~~Gs~LL~SGwWG~aRh~nY~gD~i~alawslp~gf~s~lpy 383 (428)
T KOG1435|consen 304 LVLLLLGYYIFRGANAQKNEFRKNPGDPKLKNIKTIYTSTGSKLLVSGWWGVARHPNYLGDLIMALAWSLPCGFNSPLPY 383 (428)
T ss_pred HHHHHhheeEeeccchhHHHHhcCCCCCccccccceEeccCCeEEeechhhhhcCcCcHHHHHHHHHHHHhccCCCCcch
Confidence 4677889999999999999999985321 11234555679999999999999999999999987432 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc---cC-CCCccccccCC
Q psy3539 276 YVFYWVISNQFETSLLNHWWYQSKFTR---QY-PASRKAFIPYL 315 (315)
Q Consensus 276 ~~~~~v~~nl~~~A~~~h~wY~~kF~~---~Y-p~~RkalIPfI 315 (315)
...++...-|.-||......-++|+++ +| ++-++++||+|
T Consensus 384 fy~iyf~~LLvhR~~RDe~rC~~KYG~~W~~Yc~~VpyriiP~V 427 (428)
T KOG1435|consen 384 FYPIYFTLLLVHRAARDEHRCRSKYGEDWEEYCRKVPYRILPYV 427 (428)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHhhCCcccCCCC
Confidence 446777777888886666656666652 34 66899999987
No 15
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2.1.1.100 from EC) carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif. In Saccharomyces cerevisiae (Baker's yeast) this methylation is carried out by Ste14p, an integral endoplasmic reticulum membrane protein. Ste14p is the founding member of the isoprenylcysteine carboxyl methyltransferase (ICMT) family, whose members share significant sequence homology [].; GO: 0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity, 0006481 C-terminal protein methylation, 0016021 integral to membrane; PDB: 4A2N_B.
Probab=96.87 E-value=0.015 Score=45.87 Aligned_cols=61 Identities=23% Similarity=0.364 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhHHHHHHHHHHHHh
Q psy3539 207 CVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLIL 268 (315)
Q Consensus 207 ~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~ 268 (315)
++++.|......+...|.+--..+ -...+++++=+.|.|++|.+|+|++-++..++...+.
T Consensus 3 ~~~i~g~~lr~~a~~~LG~~ft~~-v~~~~~h~lVt~GpY~~vRHP~Y~g~~~~~~~~~~ll 63 (94)
T PF04140_consen 3 GLFIAGQLLRYWAIRTLGRYFTHR-VIIQPGHKLVTSGPYRYVRHPSYLGNIIWELGGQLLL 63 (94)
T ss_dssp --HHHHHHHHHHHHHHHGGG--SS---EETT-----SSTTTTBSSHHHHH-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHccccCcEE-EEecCCCEEecccccccccCchHHHHHHHHHHHHHHH
Confidence 456777777777777775433210 0012346788999999999999999877777766665
No 16
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.54 E-value=0.13 Score=44.56 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCCccccccccccCCcccccccchhhH-HHHHHHHHHHHhhchhhHHHH
Q psy3539 199 NVYVLLCACVFLWAWVNQYNSARILSELRKKRGLVVTYDHLLPTGGLFNFVSSPHLFC-EALIYLSLYLILYNNNTFAYV 277 (315)
Q Consensus 199 ~~~~~~g~~lF~~g~~~q~~~h~~La~LRk~~G~~~~~~y~iP~gglF~~VscPhY~~-Eiliy~~~al~~~~~~~~~~~ 277 (315)
+|..++|+++++.+...-+.+-..|-+...-|= ..-.++++=+.|+|+++.+|||+. =+.+=+|..+..+--.|+.++
T Consensus 68 ~~~~~~gl~~~l~s~~ll~~vi~~LG~iWttki-~ilP~h~~v~sglfk~~kHPNYflnIipEligl~Ll~~A~~Ta~l~ 146 (172)
T COG1755 68 NWLSIIGLALLLFSQILLYWVIKSLGEIWTTKI-MILPNHQIVRSGLFKTMKHPNYFLNIIPELIGLPLLCQAWYTALLF 146 (172)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhhhheeeE-EEeCCceeeccccchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999999999887765320 000124555789999999999999 677778888876433444444
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy3539 278 FYWVISNQFETSLLNHWWY 296 (315)
Q Consensus 278 ~~~v~~nl~~~A~~~h~wY 296 (315)
...-..-+..|-++..+=.
T Consensus 147 ~p~ya~~L~vRIr~EekaL 165 (172)
T COG1755 147 SPIYALLLYVRIRQEEKAL 165 (172)
T ss_pred HHHHHHHHhhhhhHHHHHH
Confidence 4444444556655544433
No 17
>KOG2628|consensus
Probab=94.91 E-value=0.11 Score=46.17 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=55.7
Q ss_pred ccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHHHHHHHHH-HHHHHHHHHHHHHhccccCCCCc---cc
Q psy3539 235 TYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVFYWVISNQ-FETSLLNHWWYQSKFTRQYPASR---KA 310 (315)
Q Consensus 235 ~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~~~v~~nl-~~~A~~~h~wY~~kF~~~Yp~~R---ka 310 (315)
.+++++=+.|.++|+.+|-|.+=.+-++|-.++.+ |.-..+++++|+-+- ..|+....+-..+-|+++|.+-| +.
T Consensus 117 ~~~h~lv~~GvY~y~RHPsY~g~flw~~gtq~~L~-npis~v~f~~V~w~ff~~Ri~~EE~~Li~fFg~~Y~eY~kkV~s 195 (201)
T KOG2628|consen 117 VSDHKLVTSGVYAYVRHPSYVGFFLWAAGTQTMLC-NPISLVAFLLVVWRFFADRIKEEEKYLISFFGSSYVEYAKKVPS 195 (201)
T ss_pred ccCceeEeccchhheeCchHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHhCCc
Confidence 34578999999999999999999988888888774 544444555554443 56666666666667776664433 33
Q ss_pred cccCC
Q psy3539 311 FIPYL 315 (315)
Q Consensus 311 lIPfI 315 (315)
=|||+
T Consensus 196 GiPfi 200 (201)
T KOG2628|consen 196 GIPFI 200 (201)
T ss_pred CCCCC
Confidence 37775
No 18
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase
Probab=76.47 E-value=12 Score=32.21 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHhccccC----CCccccccccccCCcccccccchhhHHHHHHHHHHHHhhchhhHHHHH
Q psy3539 203 LLCACVFLWAWVNQYNSARILSELRKKR----GLVVTYDHLLPTGGLFNFVSSPHLFCEALIYLSLYLILYNNNTFAYVF 278 (315)
Q Consensus 203 ~~g~~lF~~g~~~q~~~h~~La~LRk~~----G~~~~~~y~iP~gglF~~VscPhY~~Eiliy~~~al~~~~~~~~~~~~ 278 (315)
+.+.+++.+|++.+..+-..|--=+..= |... + .=+|--|++.+.|-|-++++.++|.++.. +.. ..+
T Consensus 67 l~~~~L~aiGq~Lv~ss~~~LG~tGTYlGdyFGilm--~--~VT~FPFnv~~nPmY~GStl~fLg~al~~-p~~---~~~ 138 (164)
T PLN02797 67 LYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKNI--P--WVTEFPFGVIRDPQYVGSILSLLACLSWV-PFQ---YIL 138 (164)
T ss_pred HHHHHHHHHhhHHHHHHHHHhCCceeeehhhhcccc--c--ccccCCCCCCCCcchhhHHHHHHHHHHHh-hHH---HHH
Confidence 5788999999999999988886555431 2111 1 22678899999999999999999999865 222 345
Q ss_pred HHHHHHH
Q psy3539 279 YWVISNQ 285 (315)
Q Consensus 279 ~~v~~nl 285 (315)
+|++...
T Consensus 139 lW~lgYv 145 (164)
T PLN02797 139 LWCLGYV 145 (164)
T ss_pred HHHHHHH
Confidence 5555444
No 19
>PF13789 DUF4181: Domain of unknown function (DUF4181)
Probab=67.01 E-value=13 Score=29.90 Aligned_cols=56 Identities=14% Similarity=0.308 Sum_probs=37.4
Q ss_pred cccccCCcc--cccccchhhHHHHHHHHHHHHhh---------chhhHHHHHHHHHHHHHHHHHHHH
Q psy3539 238 HLLPTGGLF--NFVSSPHLFCEALIYLSLYLILY---------NNNTFAYVFYWVISNQFETSLLNH 293 (315)
Q Consensus 238 y~iP~gglF--~~VscPhY~~Eiliy~~~al~~~---------~~~~~~~~~~~v~~nl~~~A~~~h 293 (315)
..+|+.+++ ++|..=|=..|+.+-+++.++.. ...+....+++.++..+.||....
T Consensus 14 l~i~k~~~~~~~~vn~~h~~~e~~i~i~~ii~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ra~mEW 80 (110)
T PF13789_consen 14 LNIPKKKFFSYKHVNKLHKKGEWIIFIIFIILIFIFLFIFIFRFFYPYILIFLFLIILFCFRAFMEW 80 (110)
T ss_pred cCCCCCcCCCCCchhHHHHHHHHHhhhhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468887766 89999999999988877766541 123334455666666677775443
No 20
>PF15050 SCIMP: SCIMP protein
Probab=54.24 E-value=22 Score=29.45 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHhhHHHhhhCCCCC
Q psy3539 13 LNIIQATFLLLTLAIVIVGSLINSLEKHLPKCLIQSFRYGKFAL 56 (315)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~YGK~~~ 56 (315)
.++-+-||++++.+|+++++.+-++-=. .-++++|-||..+
T Consensus 2 ~WWr~nFWiiLAVaII~vS~~lglIlyC---vcR~~lRqGkkwe 42 (133)
T PF15050_consen 2 SWWRDNFWIILAVAIILVSVVLGLILYC---VCRWQLRQGKKWE 42 (133)
T ss_pred chHHhchHHHHHHHHHHHHHHHHHHHHH---HHHHHHHccccce
Confidence 4566789999999997766554433222 3577889999853
No 21
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins. NnrU is thought to be involved in the reduction of nitric oxide. The exact function of NnrU is unclear. It is thought however that NnrU and perhaps NnrT are required for expression of both nirK and nor [].
Probab=30.46 E-value=1.7e+02 Score=25.97 Aligned_cols=65 Identities=12% Similarity=0.220 Sum_probs=37.4
Q ss_pred cccccccchhhHHHHHHHHHHHHhhchhhHH-HHHHHHHHHHHHHHHHHHHHHHHhccccCC--CCcccccc
Q psy3539 245 LFNFVSSPHLFCEALIYLSLYLILYNNNTFA-YVFYWVISNQFETSLLNHWWYQSKFTRQYP--ASRKAFIP 313 (315)
Q Consensus 245 lF~~VscPhY~~Eiliy~~~al~~~~~~~~~-~~~~~v~~nl~~~A~~~h~wY~~kF~~~Yp--~~RkalIP 313 (315)
.++.+.+|-+++ ..+|..-=++.+.+...+ ++-.+.+--+.....+++| ++ ++|+++ +++-...|
T Consensus 96 i~r~~RHP~l~g-~~lWA~aHLl~nGd~~~~lLFg~~~~~al~~~~~~~rr--~~-~g~~~~~~~~~~s~~~ 163 (191)
T PF07298_consen 96 IYRITRHPMLLG-VLLWALAHLLANGDLASLLLFGGFLAWALIGIILIDRR--RR-FGDAWRAYPRRTSIWP 163 (191)
T ss_pred HHHHhcCchHHH-HHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHh--hc-cccccccccCCCCCCC
Confidence 788999999999 456876655554444332 2333333333444444444 55 776655 34445555
Done!