BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3543
(250 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|321476287|gb|EFX87248.1| hypothetical protein DAPPUDRAFT_187425 [Daphnia pulex]
Length = 341
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 150/235 (63%), Gaps = 8/235 (3%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV ++DINTSAN+VY+HNF +TN + RNI+S S +EIN + PD+I+MSPPCQPFTR GL
Sbjct: 30 EVVFSVDINTSANAVYRHNFKQTNQQARNIESLSAKEINKLRPDIIMMSPPCQPFTRVGL 89
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+ D+ D+RC++ +L++ +P + ++ +L+ENV GFE S R+ T L F F+EF+
Sbjct: 90 KLDVEDSRCSSFLHLLDILPHLETVSFILMENVVGFETSEMRNAFTKALKNCDFHFREFI 149
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
LSP +PNSR+RYYL+AK+ F F + +++MT P + + T
Sbjct: 150 LSPESIKIPNSRSRYYLVAKKC-------TDFSFGSENDIMTSFPNSRLCDIEMPVQEKT 202
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L L +L RYL++DK L + + + D+ +S+ CFTKAYTHYAEG
Sbjct: 203 LDPYLVKDMSDEEL-ARYLLTDKTLFKYWRILDVRQTSDTSSCCFTKAYTHYAEG 256
>gi|345487046|ref|XP_001602026.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Nasonia vitripennis]
Length = 347
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 24/258 (9%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + + +++T+IDINT+AN VY+HNFP T RNI+S ++EEI + D ILMSPPC
Sbjct: 2 LQESSVTGKIITSIDINTTANKVYRHNFPETANISRNIESVTVEEIAKLHIDCILMSPPC 61
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QPFTR GL+KD D RC +L ++++ IP I SL +LLENVKGFE S++R+ + L ++
Sbjct: 62 QPFTRIGLKKDSDDNRCLSLLHILQIIPHIESLDYILLENVKGFESSQARNEVILCLEKS 121
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTC 183
GF ++E +LSP QFG+PNSR RYYLIAKR F F+ +S L+T +P+ K
Sbjct: 122 GFNYKELILSPCQFGIPNSRHRYYLIAKRKGLK------FIFDDAS-LITSIPE-KVLEL 173
Query: 184 NPLLSRMTLHGILDSTHPS---------------GDLYRRYLVSDKDLLRRFHVFDIVNG 228
P +R T + D TH S ++ +L+ K LL+R + DI
Sbjct: 174 LP-KNRYTSVPLEDGTHSSIKSKGKCFKLKYILESNVVENFLIPGKILLKRGSLLDIRTP 232
Query: 229 KASSTNCFTKAYTHYAEG 246
++S + CFTKAY+HY EG
Sbjct: 233 ESSGSCCFTKAYSHYVEG 250
>gi|322796386|gb|EFZ18927.1| hypothetical protein SINV_80475 [Solenopsis invicta]
Length = 354
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/260 (44%), Positives = 153/260 (58%), Gaps = 29/260 (11%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + +VVTAIDIN AN VY HNFP T L RNIQS + +E+N ++ D+ILMSPPC
Sbjct: 25 LCESGIAAKVVTAIDINPIANDVYHHNFPETVLINRNIQSINAQELNKLNIDIILMSPPC 84
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QPFTR GL+KD D R +L +++ I + L+ +LLENVKGFE S+ RD + +
Sbjct: 85 QPFTRLGLRKDTLDNRSCSLLHILNLISDLKDLKYILLENVKGFEVSQMRDKLVDCIESC 144
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL----- 178
G+ ++EF+LSP QFG+PNSR RYYL+AK+ + FCFE SS L +L
Sbjct: 145 GYIYREFILSPCQFGIPNSRHRYYLLAKK------NNLKFCFEQSS-LENDLLPELFELL 197
Query: 179 ----------KANTCNPLLSRM--TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIV 226
K NP +R+ TL IL++ S +YLV K L +R V DI
Sbjct: 198 PKSKHLALAEKKGKINPKFNRLCYTLDNILENIEES-----KYLVPSKVLQKRAWVLDIR 252
Query: 227 NGKASSTNCFTKAYTHYAEG 246
+++ + CFTK Y HYAEG
Sbjct: 253 TSESNGSCCFTKGYGHYAEG 272
>gi|328782909|ref|XP_393991.3| PREDICTED: tRNA (cytosine-5-)-methyltransferase [Apis mellifera]
Length = 360
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 155/249 (62%), Gaps = 23/249 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+DINT ANS+YK+NFP L NIQS S +EIN ++ D ILMSPPCQP+TR GL
Sbjct: 26 DIVAAVDINTVANSIYKYNFPNVLLLNCNIQSLSAQEINNLNIDTILMSPPCQPYTRIGL 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QKD+ D R ++L +++ IP I +L+ +LLENVKGFE S R+ + + +GF ++E +
Sbjct: 86 QKDMLDNRSSSLLHVLSLIPQIKTLKYILLENVKGFEKSEMRNAVLKCINTSGFNYKELI 145
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFC-FETSSELMTELPKLKANTCNPLLSR- 189
LSP QFG+PN+R RYYL+AK++ + S FE S ++ LPK K N LL++
Sbjct: 146 LSPCQFGIPNTRYRYYLLAKKNNLEFCFDQSVLNFELSDSILKILPKSKYN----LLTKK 201
Query: 190 ------------MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFT 237
TL IL+ H G +YL+ K L +R + DI +++ + CFT
Sbjct: 202 SCTQNSKTDKNCYTLENILE--HVEGS---QYLIPKKLLEKRVWLMDIRTSQSNGSCCFT 256
Query: 238 KAYTHYAEG 246
KAY+HY EG
Sbjct: 257 KAYSHYVEG 265
>gi|195387886|ref|XP_002052623.1| GJ17650 [Drosophila virilis]
gi|194149080|gb|EDW64778.1| GJ17650 [Drosophila virilis]
Length = 332
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 15/235 (6%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT AN+VY HN+ T ++ RNIQS S +E+ + +++LMSPPCQP TR GL
Sbjct: 13 EVVAALDVNTVANAVYAHNYGSTKVKTRNIQSLSEKEVTKLGANMLLMSPPCQPHTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D+ D R ALS+L IP +L+ +L+ENVKGFEGS++R L +AG+ ++EF+
Sbjct: 73 QRDVDDKRSCALSHLCSLIPQCETLEYVLMENVKGFEGSQARKQFIEALEKAGYHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++S F FE + ++ +P KA+ S
Sbjct: 133 LTPTQFNVPNTRHRYYCIARKS-------KDFGFE-AGKIWEHMPGAKADPTQQ--STCK 182
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ I++ P+ LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 183 ISTIVEPNVPA-----ETLVPDDVLTKRVLVMDIIHPSQSRSMCFTKGYTHYTEG 232
>gi|194861352|ref|XP_001969765.1| GG23765 [Drosophila erecta]
gi|190661632|gb|EDV58824.1| GG23765 [Drosophila erecta]
Length = 331
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+D+NT AN+VY HN+ ++ RNIQS S +E+N + +V+LMSPPCQP+TR GL
Sbjct: 13 EIVAALDVNTVANAVYAHNYGNNLVKTRNIQSLSAKEVNKLQANVLLMSPPCQPYTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP +LQ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 73 QRDTEDKRSDALTHLCGLIPECQNLQYILMENVKGFESSQARNQFIEALERSGFHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F ++ +P A NP LS+++
Sbjct: 133 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGGKIWEAMPGGIAQ--NPALSQIS 182
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
I++ S +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 183 --EIVEENVSSD-----FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 230
>gi|380021060|ref|XP_003694392.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Apis
florea]
Length = 359
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 153/249 (61%), Gaps = 23/249 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+DINT ANS+YK+NFP L NIQS S +EIN ++ D ILMSPPCQP+TR GL
Sbjct: 25 DIVAAVDINTVANSIYKYNFPNVLLLNCNIQSLSAQEINNLNIDTILMSPPCQPYTRIGL 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+KDI D R ++L +++ IP I +L+ +LLENVKGFE S R+ + + +GF ++E +
Sbjct: 85 RKDILDNRSSSLLHVLSLIPQIKTLKYILLENVKGFEKSEMRNAVLKCINTSGFNYKELI 144
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFC-FETSSELMTELPKLKANTCNPLLSR- 189
LSP QFG+PN+R RYYL+AK+ + S FE S ++ LPK K N LL+
Sbjct: 145 LSPCQFGIPNTRYRYYLLAKKKNLEFCFDQSVLNFELSDSILKILPKSKYN----LLAEK 200
Query: 190 ------------MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFT 237
TL IL+ H G +YL+ K L +R + DI +++ + CFT
Sbjct: 201 SYNQDSKTDKNCYTLENILE--HVEGS---QYLIPKKLLEKRVWLMDIRTSQSNGSCCFT 255
Query: 238 KAYTHYAEG 246
KAY+HY EG
Sbjct: 256 KAYSHYVEG 264
>gi|307169339|gb|EFN62060.1| tRNA (cytosine-5-)-methyltransferase [Camponotus floridanus]
Length = 362
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 147/251 (58%), Gaps = 27/251 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AIDIN AN+VY+ NFP T L RNI+S + +E+N + D ILMSPPCQPFTR GL
Sbjct: 25 KVVAAIDINPVANAVYRENFPETILMNRNIESLNAQELNKLGLDAILMSPPCQPFTRLGL 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+KD D R +L +++ IP + SL+ +LLENVKGFE S RD + + G+ ++E +
Sbjct: 85 KKDALDNRACSLLHILNLIPELKSLRYILLENVKGFEVSEMRDKFLNCIESCGYVYRELI 144
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFET---SSELMTELPKLKANTCNPLLS 188
LSP QFG+PNSR RYYL+AKR FCF+ + L + L KL + + +L+
Sbjct: 145 LSPCQFGIPNSRNRYYLLAKR------KNLKFCFKQPLLKNSLPSALLKLPPKSMHAILA 198
Query: 189 R-------------MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNC 235
TL IL++ S +YL+ K L +R V DI K++ + C
Sbjct: 199 EKNGKINTKSGGMCYTLDNILENVEES-----KYLLPSKLLQKRAQVLDIRTSKSNGSCC 253
Query: 236 FTKAYTHYAEG 246
FTK Y HY EG
Sbjct: 254 FTKGYGHYVEG 264
>gi|332029105|gb|EGI69118.1| tRNA (cytosine-5-)-methyltransferase [Acromyrmex echinatior]
Length = 309
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 146/243 (60%), Gaps = 29/243 (11%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
+S + +VV AIDIN AN VY HNFP T L RNIQS + +E+N ++ D++ MSPPC
Sbjct: 1 ISESGIAAKVVAAIDINPVANDVYHHNFPETVLMNRNIQSINAQELNKLNVDIMFMSPPC 60
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QPFTR GL+KD D R +L +++ +P + +L+ +LLENVKGFE S+ RD + +
Sbjct: 61 QPFTRLGLKKDAFDNRSCSLKHILNLLPELKNLKYILLENVKGFEVSQMRDELVECIKSC 120
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTC 183
G+ ++E +LSP QFG+PNSR RYYL+AKR + FCF+ SS C
Sbjct: 121 GYVYRELILSPCQFGMPNSRYRYYLLAKR------NNLKFCFKQSS------------LC 162
Query: 184 NPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHY 243
TL+ IL+ S +YLV K L +R + DI +++ + CFTK Y++Y
Sbjct: 163 ------YTLNNILEHIEDS-----KYLVPSKLLQKRARILDIRTSESNGSCCFTKGYSYY 211
Query: 244 AEG 246
AEG
Sbjct: 212 AEG 214
>gi|383865745|ref|XP_003708333.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Megachile
rotundata]
Length = 359
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 148/250 (59%), Gaps = 27/250 (10%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
++ A+DINT ANSVYK+NFP L RNIQS ++EIN ++ D ILMSPPCQP+TR GLQ
Sbjct: 26 IIAAVDINTIANSVYKYNFPNVLLMNRNIQSLVVQEINDLNIDTILMSPPCQPYTRVGLQ 85
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLL 132
KDI D R ++L +++E I I SL+ +LLENVKGFE S R+ + + F ++E ++
Sbjct: 86 KDILDNRSSSLFHVLELIHQIKSLKYILLENVKGFEKSEMRNAVLKCMNDCRFHYKEIII 145
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASFC-------FETSSELMTELPKLKAN---- 181
SP QFG+PN+R RYYL+AKR ++ FC F +++ LPK K N
Sbjct: 146 SPCQFGIPNTRYRYYLLAKR------NDLKFCFNHIISNFHLPEDILKLLPKSKHNLLAE 199
Query: 182 TCNPLLSRM-----TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCF 236
C S M L IL++ S Y++ K L +R + DI +++ + CF
Sbjct: 200 KCCMESSNMDKKCYKLENILENVEDS-----EYMIPKKLLQKRAWLMDIRTSESTGSCCF 254
Query: 237 TKAYTHYAEG 246
TKAY Y EG
Sbjct: 255 TKAYGRYVEG 264
>gi|328710652|ref|XP_001949338.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Acyrthosiphon
pisum]
Length = 328
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 146/238 (61%), Gaps = 14/238 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ EVV A+DINT AN+VY+H FP TNLR NI S S E+ +A PD++LMSPPCQPFTR
Sbjct: 24 NFEVVLAVDINTVANAVYRHFFPSTNLRDLNILSLSPEQFDAYHPDILLMSPPCQPFTRN 83
Query: 70 GLQKDIADARCTALSYLIET-IPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
GL KDI D R L ++IE IP SL+ +L+ENVKGFE S +RD + + L+++GF F+
Sbjct: 84 GLVKDINDERTKPLLHIIENIIPKSESLKYILVENVKGFESSLARDKLVNALSQSGFTFK 143
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLS 188
EFLLSP FG+ NSR RYYL+AK+ P F ++++TE + L S
Sbjct: 144 EFLLSPVHFGICNSRLRYYLLAKKKP------LDFAISLPNDIITE-----NYWDDKLCS 192
Query: 189 RMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
R+ + D S YL++DK LL+ DIV + + CFT++Y+ Y G
Sbjct: 193 RV--QQVSDVLSESDTELEEYLINDKQLLKGGKALDIVTKHSKRSCCFTRSYSSYLCG 248
>gi|112983066|ref|NP_001036934.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888741|dbj|BAD67190.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 336
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 140/235 (59%), Gaps = 20/235 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AIDINT AN VYK+NFP T L +NIQS + EI D +LMSPPCQPFTR G
Sbjct: 31 KVVAAIDINTVANDVYKYNFPETLLFTKNIQSLTPIEIEKYKIDTVLMSPPCQPFTRNGK 90
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D D R + Y I+ + + +LQ +L+ENVKGFE S R+L LT GF +QEF+
Sbjct: 91 NLDENDPRTNSFLYFIDILDKLNTLQYILMENVKGFECSTVRNLFVEKLTYCGFVYQEFM 150
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
LSP GVPNSR RYY IAKR+ ++ F+ EL+T LPK A
Sbjct: 151 LSPVSVGVPNSRLRYYCIAKRN-------NTWNFKRKDELITCLPKTFAKP-------HC 196
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L I+++ P YLV DK +LR+ ++FDI ++ + CFTKAYTHY EG
Sbjct: 197 LKDIIENNVPDD-----YLVPDK-MLRKANIFDICYADSNRSCCFTKAYTHYVEG 245
>gi|13096616|pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna
Methyltransferase Homologue
Length = 343
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 144/236 (61%), Gaps = 8/236 (3%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 27 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 86
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 87 QGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENXGFQYQEF 146
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
LLSPT G+PNSR RY+LIAK F+ +++ E PK++ + N S +
Sbjct: 147 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIEIHRKNQQDSDL 200
Query: 191 TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
++ + D D+ +YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 201 SVKMLKDFLEDDTDV-NQYLLPPKSLLRYALLLDIVQPTXRRSVCFTKGYGSYIEG 255
>gi|195035415|ref|XP_001989173.1| GH11576 [Drosophila grimshawi]
gi|193905173|gb|EDW04040.1| GH11576 [Drosophila grimshawi]
Length = 327
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 144/235 (61%), Gaps = 14/235 (5%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT AN+VY HN+ T+L+ RNIQS S +E+ ++ +V+LMSPPCQP TR GL
Sbjct: 13 EVVAALDVNTVANAVYVHNYGTTHLKTRNIQSLSEKEVRQLNANVLLMSPPCQPHTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D+ D R ALS+L +P +L +L+ENVKGFE S++R L +AGF ++EF+
Sbjct: 73 QRDVDDKRSCALSHLCCLLPFCETLDYVLMENVKGFEASQARQQFIEALEKAGFHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++S F F ++ +P + N S+ T
Sbjct: 133 LTPTQFSVPNTRYRYYCIARKS-------KDFDF-AGGKIWEHMPAAETNNA----SQQT 180
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ I P ++ LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 181 MSKISSIVEP--NVSDETLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEG 233
>gi|195350999|ref|XP_002042024.1| GM26726 [Drosophila sechellia]
gi|194123848|gb|EDW45891.1| GM26726 [Drosophila sechellia]
Length = 330
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 146/235 (62%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+D+NT AN+VY+HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 13 EIVAALDVNTVANAVYEHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP +LQ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 73 QRDTEDKRSDALTHLCGLIPECQNLQYILMENVKGFESSQARNQFIESLERSGFHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F ++ E+P A N LS++
Sbjct: 133 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGDQIWEEMPGAIAQ--NQALSQI- 181
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + S D +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 182 --AEIVEENVSAD----FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 230
>gi|350398300|ref|XP_003485152.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
impatiens]
Length = 354
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 155/257 (60%), Gaps = 28/257 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + +VV A+DINT ANS+Y++NFP L NIQS S + IN ++ D ILMSPPC
Sbjct: 17 LQESGINGDVVAAVDINTVANSIYRYNFPNVLLMNCNIQSLSAKLINDLNIDTILMSPPC 76
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QP+TR GLQ+DI+D R ++L +++ IP + +L+ +LLENVKGFE S R+ + + +
Sbjct: 77 QPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHILLENVKGFEKSEMRNAVLKCMNMS 136
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE-------TSSELMTELP 176
GF ++E +LSP QFG+PN+R RYYL+AKR ++ FCF+ ++ LP
Sbjct: 137 GFNYKELILSPCQFGIPNTRYRYYLLAKR------KDSEFCFDHCILNFNLPEAVLKALP 190
Query: 177 KLKANTCNPLLSR-------MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGK 229
+ K N LL L IL++ S +YL+ K L +R +FDI +
Sbjct: 191 RSKHNL---LLEGAKTDKKCYKLENILENVEKS-----QYLIPRKLLQKRAWLFDIRTSQ 242
Query: 230 ASSTNCFTKAYTHYAEG 246
+ + CFTKAY+HYAEG
Sbjct: 243 SDGSCCFTKAYSHYAEG 259
>gi|195578681|ref|XP_002079192.1| GD23816 [Drosophila simulans]
gi|194191201|gb|EDX04777.1| GD23816 [Drosophila simulans]
Length = 345
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+D+NT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 27 EIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP +LQ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 87 QRDTEDKRSDALTHLCGLIPECQNLQYILMENVKGFESSQARNQFIESLERSGFHWREFI 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F ++ E+P A N LS++
Sbjct: 147 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGDKIWEEMPGAIAQ--NQALSQI- 195
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + S D +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 196 --AEIVEENVSAD----FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 244
>gi|357620806|gb|EHJ72855.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 318
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 143/235 (60%), Gaps = 19/235 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVVTA+DINT AN VYKHNFP T L +NIQS S E+I M+ + ILMSPPCQPFTR G
Sbjct: 13 EVVTAVDINTVANEVYKHNFPNTPLITKNIQSLSYEDIKKMNVNTILMSPPCQPFTRNGK 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D D R + +YLI+ + +++ +L+ENVKGFE S R+L + L + F +QEFL
Sbjct: 73 FLDENDPRTNSFTYLIDLFDELDNIEYILMENVKGFECSTVRNLFINKLKKCNFVYQEFL 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L PT GVPNSR RYY IA+++ S F + E++T+L K T
Sbjct: 133 LCPTSVGVPNSRLRYYCIARKNTLDWS------FIRTDEIITKLTKDYG-------EPHT 179
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L IL++ P +YL+++ + L+R ++ DI + + CFTK+YTHY EG
Sbjct: 180 LEAILETNVP-----EKYLLTN-NFLKRAYLLDICYKHSKRSCCFTKSYTHYVEG 228
>gi|340725061|ref|XP_003400893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Bombus
terrestris]
Length = 354
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 154/257 (59%), Gaps = 28/257 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + +VV A+DINT ANS+Y++NFP L NIQS S + IN ++ D ILMSPPC
Sbjct: 17 LQESGINGDVVAAVDINTVANSIYRYNFPNVLLMNCNIQSLSAKLINDLNIDTILMSPPC 76
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QP+TR GLQ+DI+D R ++L +++ IP + +L+ +LLENVKGFE S R+ + + +
Sbjct: 77 QPYTRVGLQRDISDNRSSSLLHVLSLIPQLRTLKHILLENVKGFENSEMRNAVLKCMNMS 136
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE-------TSSELMTELP 176
GF ++E +LSP QFG+PN+R RYYL+AKR ++ FCF+ ++ LP
Sbjct: 137 GFNYKELILSPCQFGIPNTRYRYYLLAKR------KDSEFCFDHCILNFNLPEAVLKALP 190
Query: 177 KLKANTCNPLLSR-------MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGK 229
K N LL L IL++ S +YL+ K L +R +FDI +
Sbjct: 191 GSKHNL---LLEGAKTDKNCYKLENILENVDKS-----QYLIPRKLLQKRAWLFDIRTSQ 242
Query: 230 ASSTNCFTKAYTHYAEG 246
+ + CFTKAY+HYAEG
Sbjct: 243 SDGSCCFTKAYSHYAEG 259
>gi|194765989|ref|XP_001965107.1| GF21561 [Drosophila ananassae]
gi|190617717|gb|EDV33241.1| GF21561 [Drosophila ananassae]
Length = 334
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 144/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT AN+VY HNF + ++ RNIQS + +E+ ++ ++ILMSPPCQP TR GL
Sbjct: 27 EVVGAMDVNTVANAVYAHNFGQKTVKTRNIQSLTEKEVTKVNANMILMSPPCQPHTRQGL 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QKD D R AL++L IP +LQ +L+ENVKGFE S++R+ L +A F ++EF+
Sbjct: 87 QKDTEDRRSDALTHLCALIPECKTLQYILMENVKGFECSQARNQFVDALEKAEFYWREFI 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ F F ++ E+P LKA+
Sbjct: 147 LTPTQFNVPNTRHRYYCIARKL-------QDFEF-PGGKIWEEMPGLKADR----QPSTK 194
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ I++ D+ +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 195 ISEIVEE-----DVASNFLVPDDVLTKRVLVMDIIHPTQSRSMCFTKGYTHYTEG 244
>gi|17137742|ref|NP_477475.1| methyltransferase 2, isoform A [Drosophila melanogaster]
gi|7297918|gb|AAF53163.1| methyltransferase 2, isoform A [Drosophila melanogaster]
Length = 345
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+D+NT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 27 QIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP L+ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 87 QRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERSGFHWREFI 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F ++ E+P A N LS++
Sbjct: 147 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGGKIWEEMPGAIAQ--NQGLSQIA 196
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ P +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 197 -EIVEENVSPD------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 244
>gi|116007318|ref|NP_001036355.1| methyltransferase 2, isoform C [Drosophila melanogaster]
gi|113194978|gb|ABI31309.1| methyltransferase 2, isoform C [Drosophila melanogaster]
Length = 345
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 144/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+D+NT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 27 QIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP L+ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 87 QRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERSGFHWREFI 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F ++ E+P A N LS++
Sbjct: 147 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGGKIWEEMPGAIAQ--NQGLSQIA 196
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ P +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 197 -EIVEENVSPD------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 244
>gi|195114574|ref|XP_002001842.1| GI17066 [Drosophila mojavensis]
gi|193912417|gb|EDW11284.1| GI17066 [Drosophila mojavensis]
Length = 331
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 147/238 (61%), Gaps = 15/238 (6%)
Query: 9 FSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
S EVV A+D+NT AN+VY HN+ T+++ RNIQS + +EI ++ +++LMSPPCQP TR
Sbjct: 10 LSGEVVAAMDVNTVANAVYAHNYGATSVKTRNIQSLAEKEIKKLNANMLLMSPPCQPHTR 69
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
GLQ+D+ D R AL++L IP +L+ +L+ENVKGFE S++R L +AGF ++
Sbjct: 70 QGLQRDVEDKRSCALAHLCLLIPQCDTLEYVLMENVKGFEVSQARQQFIEALDKAGFHWR 129
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLS 188
E +L+PTQF VPN+R RYY IA++ F F+ + ++ +P K + +
Sbjct: 130 ELILTPTQFKVPNTRHRYYCIARKG-------KDFDFD-NEKIWEHMPGTKPDPDQQPMC 181
Query: 189 RMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+++ IL+ P +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 182 KIS--TILEPDVPDD-----FLVPDDVLSKRVLVMDIIHPSQSRSMCFTKGYTHYTEG 232
>gi|195472313|ref|XP_002088445.1| GE18570 [Drosophila yakuba]
gi|194174546|gb|EDW88157.1| GE18570 [Drosophila yakuba]
Length = 331
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+DINT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 13 EIVAAMDINTVANAVYAHNYGHNFVKTRNIQSLSVKEVGKLQANMLLMSPPCQPHTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QKD D R AL+++ IP +LQ +L+ENVKGFE S++R+ L R+ F ++EF+
Sbjct: 73 QKDTEDKRSDALTHICGLIPECQNLQYILMENVKGFEISQARNQFIEALERSEFHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ A F F S++ +P A N LS+++
Sbjct: 133 LTPTQFNVPNTRYRYYCIARKG-------ADFPF-AGSKIWEAMPGGIAQNQN--LSQIS 182
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
I++ S +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 183 --EIVEENVSSD-----FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 230
>gi|21428368|gb|AAM49844.1| GM14972p [Drosophila melanogaster]
Length = 331
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 144/235 (61%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+D+NT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 13 QIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 72
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP L+ +L+ENVKGFE S++R+ L R+GF ++EF+
Sbjct: 73 QRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERSGFHWREFI 132
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ + F F ++ E+P A N LS++
Sbjct: 133 LTPTQFNVPNTRYRYYCIARKG-------SDFPF-AGGKIWEEMPGAIAQ--NQALSQIA 182
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ P +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 183 -EIVEENVSPD------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 230
>gi|6110464|gb|AAF03835.1|AF185647_1 DNA (5-cytosine) methyltransferase homolog [Drosophila
melanogaster]
Length = 345
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 17/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V A+D+NT AN+VY HN+ ++ RNIQS S++E+ + +++LMSPPCQP TR GL
Sbjct: 27 QIVAALDVNTVANAVYAHNYGSNLVKTRNIQSLSVKEVTKLQANMLLMSPPCQPHTRQGL 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP L+ +L+ENVKGFE S++R+ L R GF ++EF+
Sbjct: 87 QRDTEDKRSDALTHLCGLIPECQELEYILMENVKGFESSQARNQFIESLERPGFHWREFI 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ + F F ++ E+P A N LS++
Sbjct: 147 LTPTQFNVPNTRYRYYCIARKG-------SDFPF-AGGKIWEEMPGAIAQ--NQALSQIA 196
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ P +LV D L +R V DI++ S + CFTK YTHY EG
Sbjct: 197 -EIVEENVSPD------FLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEG 244
>gi|443726123|gb|ELU13416.1| hypothetical protein CAPTEDRAFT_108989 [Capitella teleta]
Length = 360
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 147/254 (57%), Gaps = 31/254 (12%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EV+ A DINT AN +YKHNFP L R I+S + E + + PD+I MSPPCQPFTR G
Sbjct: 29 EVIAAADINTVANDIYKHNFPDCLLMNRCIESIQLSEFSRLRPDLITMSPPCQPFTRVGK 88
Query: 72 QKDIADARCTALSYLIETIPAIP-SLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q+DI D R + +L++ I + S++ + +ENVKGF+GS + ++ L A + QEF
Sbjct: 89 QRDIDDPRTKSFLHLLKVISTLERSVKYIFVENVKGFDGSEAHRMLLETLQAADYVMQEF 148
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
L+SP Q G+PNSR RYYL+AK+ P F F+T+S++MTELP A+ N S+
Sbjct: 149 LISPLQCGIPNSRLRYYLMAKKKP------LKFQFDTTSQIMTELPACAASYLNHCQSKP 202
Query: 191 TLHGILDSTHPSG-DLYRR----------YLVSD--KDLL-----RRFHVFDIVNGKASS 232
DST S LY R YL D DLL RF V DIV +++
Sbjct: 203 ------DSTASSSVPLYDRCAAMCRPLSSYLQEDMSHDLLPEKFVHRFWVMDIVKPSSTN 256
Query: 233 TNCFTKAYTHYAEG 246
+ CFTK Y H+ EG
Sbjct: 257 SCCFTKRYGHHIEG 270
>gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis]
Length = 343
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 147/241 (60%), Gaps = 10/241 (4%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV ++DI+ +A+ VYKHNFP T R+I+ FS ++ + M + ++MSPPCQPFTR GL
Sbjct: 30 EVVCSVDISPAASLVYKHNFPGTKHWERSIEGFSAKDFDNMGFNTLMMSPPCQPFTRVGL 89
Query: 72 QKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QKDI D R + YL++ +P + + +L+ENVKGFE S++ D+ +L + + +F
Sbjct: 90 QKDINDPRTRSFIYLMKVLPQLSNPPTYILMENVKGFENSKAHDMFLQVLEQLEYSTAQF 149
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK-----LKANTCNP 185
LL+P QFGVPNSR RYYL+AKR P E + T +E++ +P+ L +N
Sbjct: 150 LLTPKQFGVPNSRLRYYLLAKRKPLQFPDEVN----TPNEVIETMPQALQKCLNSNAGKE 205
Query: 186 LLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ T+ + + + + + +++K LLR V DIV + S+ CFTK+Y +YAE
Sbjct: 206 QNEKHTIKTLENYLEEAESTLKEHALTEKTLLRYLQVMDIVTPRHQSSTCFTKSYGYYAE 265
Query: 246 G 246
G
Sbjct: 266 G 266
>gi|406868804|gb|AFS64716.1| DNA methyltransferase-2 [Spodoptera frugiperda]
Length = 332
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 137/235 (58%), Gaps = 19/235 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+DINT ANSVYKHNFP TNL RNIQ + + I + D ILMSPPCQPFTR G
Sbjct: 27 EIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFTRNGK 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D D R + YLI + + ++ +L+ENVKGFE S R+L L F +QEFL
Sbjct: 87 YLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNFIYQEFL 146
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L P+ GVPNSR RYY A+R + ++ F+ E++T LPK +
Sbjct: 147 LCPSTVGVPNSRLRYYCTARR------NNLTWPFKRRDEIITRLPK-------DFGVPHS 193
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L I++ D+ ++LV +K +LR VFDI + + CFTKAYTHYA+G
Sbjct: 194 LESIIEE-----DVDEKFLVPEK-MLRCAKVFDICYKTSKRSCCFTKAYTHYADG 242
>gi|145207311|gb|AAI14323.2| TRNA aspartic acid methyltransferase 1 [Danio rerio]
Length = 381
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 146/268 (54%), Gaps = 39/268 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT+AN +YKHNFP T L + I+ ++++ + ++ D+ILMSPPCQPFTR GL
Sbjct: 31 EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMTLQDFDRLNFDMILMSPPCQPFTRIGL 90
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+AD R + Y+++ +P + + +LLENVKGFE S +RD + L + FQEF
Sbjct: 91 QGDVADPRTKSFLYILDLLPRLSKRPRFILLENVKGFESSAARDALLQTLRECDYSFQEF 150
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-------------- 176
L+SPT G+PNSR RY+LIAKR+P +F F S+E++ P
Sbjct: 151 LISPTSLGIPNSRLRYFLIAKRAP------ETFSFPVSTEIIEGFPMSESTDGLSVPYDH 204
Query: 177 ------------KLKANTCNPLL------SRMTLHGILDSTHPSGDLYRRYLVSDKDLLR 218
K T L S+ ++ +LD + YL+ K LLR
Sbjct: 205 PTSSASEREKTIMFKLETEEDLERKRKQNSQESVRRLLDFLQEEEEDMELYLLPPKTLLR 264
Query: 219 RFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V DIV + + CFTK Y HY EG
Sbjct: 265 YALVMDIVQPSSRRSVCFTKGYGHYVEG 292
>gi|414145788|pdb|4H0N|A Chain A, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145789|pdb|4H0N|B Chain B, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145790|pdb|4H0N|C Chain C, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
gi|414145791|pdb|4H0N|D Chain D, Crystal Structure Of Spodoptera Frugiperda Dnmt2
E260a/e261a/k263a Mutant
Length = 333
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 137/235 (58%), Gaps = 19/235 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+DINT ANSVYKHNFP TNL RNIQ + + I + D ILMSPPCQPFTR G
Sbjct: 28 EIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFTRNGK 87
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D D R + YLI + + ++ +L+ENVKGFE S R+L L F +QEFL
Sbjct: 88 YLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNFIYQEFL 147
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L P+ GVPNSR RYY A+R + ++ F+ E++T LPK +
Sbjct: 148 LCPSTVGVPNSRLRYYCTARR------NNLTWPFKRRDEIITRLPK-------DFGVPHS 194
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L I++ D+ ++LV +K +LR VFDI + + CFTKAYTHYA+G
Sbjct: 195 LESIIEE-----DVDEKFLVPEK-MLRCAKVFDICYKTSKRSCCFTKAYTHYADG 243
>gi|89941477|ref|NP_001018153.1| tRNA (cytosine-5-)-methyltransferase [Danio rerio]
gi|62433271|dbj|BAD95483.1| DNA methyltransferase [Danio rerio]
Length = 381
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 146/268 (54%), Gaps = 39/268 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT+AN +YKHNFP T L + I+ ++++ + ++ D+ILMSPPCQPFTR GL
Sbjct: 31 EVVAAVDVNTTANLIYKHNFPTTQLLPKTIEGMTLQDFDRLNFDMILMSPPCQPFTRIGL 90
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+AD R + Y+++ +P + + +LLENVKGFE S +RD + L + FQEF
Sbjct: 91 QGDVADPRTKSFLYILDLLPRLSKRPRFILLENVKGFESSAARDALLQTLRECDYSFQEF 150
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-------------- 176
L+SPT G+PNSR RY+LIAKR+P +F F S+E++ P
Sbjct: 151 LISPTSLGIPNSRLRYFLIAKRAP------ETFSFPVSTEIIEGFPMSESTDGLSVPYDH 204
Query: 177 ------------KLKANTCNPLL------SRMTLHGILDSTHPSGDLYRRYLVSDKDLLR 218
K T L S+ ++ +LD + YL+ K LLR
Sbjct: 205 PTSSASEREKTIMFKLETEEDLERKRKQNSQESVRRLLDFLQEEEEDMEPYLLPPKTLLR 264
Query: 219 RFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V DIV + + CFTK Y HY EG
Sbjct: 265 YALVMDIVQPSSRRSVCFTKGYGHYVEG 292
>gi|157112484|ref|XP_001657555.1| DNA (cytosine-5)-methyltransferase [Aedes aegypti]
gi|108878059|gb|EAT42284.1| AAEL006166-PA [Aedes aegypti]
Length = 344
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 137/235 (58%), Gaps = 18/235 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV+AIDIN AN++Y HNF NI S + + I + +VILMSPPCQPF+R G
Sbjct: 39 KVVSAIDINPVANAIYNHNFGANKASNSNILSLTPDRIQKLGVNVILMSPPCQPFSRNGN 98
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
KD+ D R +L + + IP++Q +LLENVKGFE S++ +L + L+ AGFRF+E++
Sbjct: 99 FKDVDDRRADPFVHLCDLLDKIPTVQFILLENVKGFERSQACELYKTRLSAAGFRFKEYI 158
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
LSP FGVPN+R RYY +AKR+ F S+ + P L+ T
Sbjct: 159 LSPHDFGVPNTRHRYYCVAKRTE----------FRNPSDEIVSKPTLQHVG--------T 200
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
I D P + RYL+ D L +R + DI ++++ CFTKAYTHYAEG
Sbjct: 201 AKRICDLVEPESEKLNRYLLKDDLLRKRLAIMDICTPDSTNSMCFTKAYTHYAEG 255
>gi|73948982|ref|XP_848593.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 2
[Canis lupus familiaris]
Length = 391
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 142/276 (51%), Gaps = 41/276 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R +L Y++ +P + L + +LLENVKGFE S +RDL+ L GF++QEF
Sbjct: 88 QGDVTDPRTNSLLYILNILPRLQKLPKYVLLENVKGFEVSSTRDLLIQTLENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAK--RSPAAHSSEASFCFE-------------TSSELMTEL 175
LLSPT FG+PNSR RY+LIAK P + E +E E
Sbjct: 148 LLSPTSFGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKTESENPEKNTIDAENKIER 207
Query: 176 PKLKANTC-----------NPLLSRMTLHGILDSTHPSGDL--------------YRRYL 210
K++ N C L T+ + H DL +Y
Sbjct: 208 KKIEPNICFDKGRQCSGKETILFKLETIQELDRKHHQDNDLSVQMLKDFLEDDVDMNQYF 267
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ K LLR + DIV + CFTK Y Y EG
Sbjct: 268 LPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSYVEG 303
>gi|224044835|ref|XP_002192893.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Taeniopygia
guttata]
Length = 399
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 148/284 (52%), Gaps = 49/284 (17%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT AN+VYKHNFP T L + I+ +++E + +S D+IL+SPPCQPFTRTGL
Sbjct: 28 EVVAAVDVNTLANAVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILLSPPCQPFTRTGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D++D R + Y+++ +P + L + LLLENVKGFE S +R+ + L GF++QEF
Sbjct: 88 QGDVSDPRSKSFLYILDILPRLQKLPKYLLLENVKGFESSSARNELLQTLATCGFKYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAK--------------------RSPAAHSSE--ASFCFETS 168
LLSPT G+PNSR RY+LIAK + P E A ETS
Sbjct: 148 LLSPTCLGIPNSRLRYFLIAKLQQEPFSFQAPGQILTRFPDQDPEGVLKEKVADKVGETS 207
Query: 169 SELMTELPKLKANTC----------NPLLSRM----------------TLHGILDSTHPS 202
S L TE L N P L ++ ++ + D
Sbjct: 208 SSLSTEEKNLDPNIGPDSSSKSLPKGPFLFKLETVEEMERKHNQDNDSSIQMLKDFLEEE 267
Query: 203 GDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +Y + K LLR + DIV + CFTK Y HY EG
Sbjct: 268 NEEMSQYFLPPKSLLRYALLLDIVKPTCRRSTCFTKGYGHYVEG 311
>gi|440909178|gb|ELR59115.1| tRNA (cytosine-5-)-methyltransferase [Bos grunniens mutus]
Length = 391
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 149/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEMSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN--------- 181
LLSPT G+PNSR RY+LIAK P F F+ +++ E PK ++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKLQPEP------FPFQAPGQVLMEFPKTESEHPPKYAINA 201
Query: 182 -------------------TCN---PLLSRMTLHGILDSTHP-----SGDLYRRYLVSD- 213
C+ +L ++ G +D H S + + +L D
Sbjct: 202 EKKTEEKKTGPKICFDSSTQCSGKEAILFKLETAGEIDRKHQQDSDLSVQMLKDFLEDDI 261
Query: 214 ---------KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
K LLR + DIV + + CFTK Y Y EG
Sbjct: 262 DKHSFFLPPKSLLRYALLLDIVKPTSKRSMCFTKGYGRYIEG 303
>gi|242253856|ref|NP_001156357.1| tRNA (cytosine-5-)-methyltransferase [Sus scrofa]
gi|226222432|gb|ACO38647.1| DNA methyltransferase 2 [Sus scrofa]
Length = 408
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 148/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S +++LMSPPCQPFTR GL
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGVTLEEFDRLSFNMVLMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-------------- 176
LLSPT G+PNSR RY+LIAK F F+ +++ E P
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPFPFQAPGQVLMEFPQMESEHPQKHAIDA 201
Query: 177 -------KLKANTC----------NPLLSRMTLHGILDSTHP-----SGDLYRRYLVSD- 213
K++ N C +L ++ G +D H S + + +L D
Sbjct: 202 QSKIEEKKIERNICLDSSAQCSGKEAILFKLETAGEIDRKHQQDSDLSVQMLKGFLEDDI 261
Query: 214 ---------KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
K LLR + DIV + + CFTK Y Y EG
Sbjct: 262 DMNSYFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEG 303
>gi|307210936|gb|EFN87251.1| tRNA (cytosine-5-)-methyltransferase [Harpegnathos saltator]
Length = 238
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 119/175 (68%), Gaps = 13/175 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AIDIN AN VY+HNFP T L RNIQS S + +N + D ILMSPPCQPFTR GL
Sbjct: 25 KVVAAIDINPVANDVYRHNFPETVLMNRNIQSISAQTLNKLDVDAILMSPPCQPFTRLGL 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+DI D+R +L +++ IP + +L+ +LLENV+GFE S+ R+ + L G+ ++E +
Sbjct: 85 QRDILDSRACSLLHVLSLIPKLKNLKYILLENVQGFEVSQMRNKLVDCLEECGYAYRELM 144
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE-------TSSELMTELPKLK 179
LSP+QFG+PNSR RYYL+AKR + FCFE +SSEL+ LPK K
Sbjct: 145 LSPSQFGIPNSRRRYYLLAKR------KDLKFCFEQTPLQNDSSSELLKLLPKSK 193
>gi|426240827|ref|XP_004014295.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ovis aries]
Length = 386
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 147/277 (53%), Gaps = 48/277 (17%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + Y+++ +P + L + +L+ENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFLYILDILPRLQKLPKYILVENVKGFEVSSARDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK P F F+ +++ E PK ++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKLQPEP------FPFQAPGQVLMEFPKTESEHSPQYAINA 201
Query: 181 ------NTC----------NPLLSRMTLHGILD-STHPSGDLYRR--------------Y 209
N C +L ++ G +D DL R +
Sbjct: 202 EKKTEPNICFDSSTQCSGKEAILFKLETAGEIDRKRQQDSDLSVRILKDFLEDNIDKHSF 261
Query: 210 LVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ K LLR + DIV + + CFTK Y Y EG
Sbjct: 262 FLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEG 298
>gi|301766512|ref|XP_002918675.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Ailuropoda
melanoleuca]
Length = 391
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 145/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYK+NFP T L + I+ ++EE + +S + ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNTILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R +L Y+++ +P + L + +LLENVKGFE S +RDL+ L GF++QEFL
Sbjct: 89 GDVTDPRTNSLLYILDILPRLQKLPKYILLENVKGFEVSSARDLLIQTLENCGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA----------- 180
LSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 149 LSPTSLGIPNSRLRYFLIAKL------QSEPLPFQVPGQVLMEFPKIESEHPERNTIDGE 202
Query: 181 ----------NTC----------NPLLSRM-TLHGILDSTHPSGDL-------------- 205
N C +L ++ T+ I H DL
Sbjct: 203 NKIEREKIEPNICFDKSRQCSGKEAILFKLETVEEIDRKLHQDSDLSVQMLKDFLEDDVD 262
Query: 206 YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 263 VNQYFLPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSYIEG 303
>gi|281338132|gb|EFB13716.1| hypothetical protein PANDA_007177 [Ailuropoda melanoleuca]
Length = 372
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 145/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYK+NFP T L + I+ ++EE + +S + ILMSPPCQPFTR GLQ
Sbjct: 10 VVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNTILMSPPCQPFTRIGLQ 69
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R +L Y+++ +P + L + +LLENVKGFE S +RDL+ L GF++QEFL
Sbjct: 70 GDVTDPRTNSLLYILDILPRLQKLPKYILLENVKGFEVSSARDLLIQTLENCGFQYQEFL 129
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA----------- 180
LSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 130 LSPTSLGIPNSRLRYFLIAKL------QSEPLPFQVPGQVLMEFPKIESEHPERNTIDGE 183
Query: 181 ----------NTC----------NPLLSRM-TLHGILDSTHPSGDL-------------- 205
N C +L ++ T+ I H DL
Sbjct: 184 NKIEREKIEPNICFDKSRQCSGKEAILFKLETVEEIDRKLHQDSDLSVQMLKDFLEDDVD 243
Query: 206 YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 244 VNQYFLPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSYIEG 284
>gi|32441269|ref|NP_861528.1| tRNA (cytosine-5-)-methyltransferase [Bos taurus]
gi|75046080|sp|Q7YS61.1|TRDMT_BOVIN RecName: Full=tRNA (cytosine-5-)-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|31074159|gb|AAP20550.1| DNA cytosine-5 methyltransferase 2 [Bos taurus]
gi|296481442|tpg|DAA23557.1| TPA: tRNA (cytosine-5-)-methyltransferase [Bos taurus]
Length = 391
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFLHILDILPRLQKLPKYILLENVKGFEMSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN--------- 181
LLSPT G+PNSR RY+LIAK P F F+ +++ E PK ++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKLQPEP------FPFQAPGQVLMEFPKTESEHPPKYAINA 201
Query: 182 -------------------TCN---PLLSRMTLHGILDSTHPS-GDLYRR---------- 208
C+ +L ++ G +D H DL R
Sbjct: 202 EKKTEEKKTGPKICFDSSTQCSGKEAILFKLETAGEIDRKHQQDSDLSVRMLKDFLEDDI 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + K LLR + DIV + + CFTK Y Y EG
Sbjct: 262 DKHSFFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEG 303
>gi|61554791|gb|AAX46615.1| DNA methyltransferase 2 isoform a [Bos taurus]
Length = 377
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 148/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFLHILDILPRLQKLPKYILLENVKGFEMSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN--------- 181
LLSPT G+PNSR RY+LIAK P F F+ +++ E PK ++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKLQPEP------FPFQAPGQVLMEFPKTESEHPPKYAINA 201
Query: 182 -------------------TCN---PLLSRMTLHGILDSTHPS-GDLYRR---------- 208
C+ +L ++ G +D H DL R
Sbjct: 202 EKKTEEKKTGPKICFDSSTQCSGKEAILFKLETAGEIDRKHQQDSDLSVRMLKDFLEDDI 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + K LLR + DIV + + CFTK Y Y EG
Sbjct: 262 DKHSFFLPPKSLLRYALLLDIVKPTSRRSMCFTKGYGRYIEG 303
>gi|348553999|ref|XP_003462813.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cavia
porcellus]
Length = 391
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 41/276 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPDTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + ++++ +P + L + +LLENVKGFE S +RDL+ + GFR+QEF
Sbjct: 88 QGDMTDRRTNSFLHVLDILPRLQKLPRYILLENVKGFEVSSTRDLLIETIENCGFRYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAK--------RSPAAH-------SSEASFCFETSSELMTEL 175
LLSPT G+PNSR RY+LIAK ++P SE + +E +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMDFPKIESEHPQKYAIDAENRNNV 207
Query: 176 PKLKANTC---NP-------LLSRMTLHGILDSTH-PSGDLYRR--------------YL 210
K++ NTC NP +L ++ +D H + DL + Y+
Sbjct: 208 KKIEPNTCFDRNPQCSGKDTILFKLETAEEIDRKHQQNNDLTVQMLKDFLEDEVDMNLYI 267
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ K LLR + DIV + CFTK Y Y EG
Sbjct: 268 LPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSYVEG 303
>gi|270012712|gb|EFA09160.1| DNA methyltransferase 2 [Tribolium castaneum]
Length = 329
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 138/235 (58%), Gaps = 20/235 (8%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
+ A+DIN +ANSVYKHNFP NL RN+QS + + IN + + ILMSPPCQPFTR GLQ
Sbjct: 26 IKAAVDINPTANSVYKHNFPHINLLNRNVQSLTPQFINKLGVNTILMSPPCQPFTRNGLQ 85
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLL 132
+DI D R + +++ +P + + +L+ENVKGFE S+ RDL+ L + GF +QEF+L
Sbjct: 86 EDINDERTKSFIHVLAILPDL-KVTRILIENVKGFERSKMRDLLIETLEKCGFNYQEFIL 144
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-KLKANTCNPLLSRMT 191
+PTQ G+PN+R RYY +AK+ P F F+T L TE P + A C
Sbjct: 145 TPTQIGIPNTRHRYYCLAKKPPNV------FNFKTGV-LKTEFPNQQNAPHC------FE 191
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +L+ + Y ++DK L DI + +T CFTKAY Y +G
Sbjct: 192 ISKVLEQNELTP-----YYLTDKVLTNYLETTDIRYSTSRNTCCFTKAYGRYVKG 241
>gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium
castaneum]
Length = 579
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 137/232 (59%), Gaps = 20/232 (8%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDI 75
A+DIN +ANSVYKHNFP NL RN+QS + + IN + + ILMSPPCQPFTR GLQ+DI
Sbjct: 279 AVDINPTANSVYKHNFPHINLLNRNVQSLTPQFINKLGVNTILMSPPCQPFTRNGLQEDI 338
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPT 135
D R + +++ +P + + +L+ENVKGFE S+ RDL+ L + GF +QEF+L+PT
Sbjct: 339 NDERTKSFIHVLAILPDLKVTR-ILIENVKGFERSKMRDLLIETLEKCGFNYQEFILTPT 397
Query: 136 QFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-KLKANTCNPLLSRMTLHG 194
Q G+PN+R RYY +AK+ P F F+T L TE P + A C +
Sbjct: 398 QIGIPNTRHRYYCLAKKPPNV------FNFKTGV-LKTEFPNQQNAPHC------FEISK 444
Query: 195 ILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+L+ + Y ++DK L DI + +T CFTKAY Y +G
Sbjct: 445 VLEQNELTP-----YYLTDKVLTNYLETTDIRYSTSRNTCCFTKAYGRYVKG 491
>gi|260796005|ref|XP_002592995.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
gi|229278219|gb|EEN49006.1| hypothetical protein BRAFLDRAFT_275730 [Branchiostoma floridae]
Length = 386
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 40/268 (14%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A+DINT+AN+VY+HNFP NL R+I + E + + DV +MSPPCQPFTR GL+
Sbjct: 36 VVAALDINTTANAVYRHNFPHVNLLQRDITGIKLPEFQSWNADVFMMSPPCQPFTRVGLK 95
Query: 73 KDIADARCTALSYLIETIPAIPS-LQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D AD R + Y+++ + + +LLENVKGFE S +R + + L G+ +QEFL
Sbjct: 96 GDTADPRTKSFLYILDILRRMAEPPNHILLENVKGFETSETRGNLVTTLDECGYCYQEFL 155
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP------KLKAN---T 182
LSP QFG+PNSR RY+L+AKR P +F FE +E+M E+P + AN +
Sbjct: 156 LSPNQFGIPNSRLRYFLLAKRKP------LTFVFEHQTEIMKEMPVNSLIGQAPANQDAS 209
Query: 183 CNPLLSRMTLHGILDSTHP------------------------SGDLYRRYLVSDKDLLR 218
+ + ++ T + P S + L+ DK L R
Sbjct: 210 SSEVPNQSTSQNKQEIPCPYSIFDPEDRDTTNCREISEFLEPHSKEEEESLLLQDKLLDR 269
Query: 219 RFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ V DIV + + CFTKAY HY EG
Sbjct: 270 YWKVLDIVTPSSRRSCCFTKAYGHYVEG 297
>gi|347971242|ref|XP_312975.5| AGAP004101-PA [Anopheles gambiae str. PEST]
gi|333468578|gb|EAA08679.5| AGAP004101-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 137/236 (58%), Gaps = 16/236 (6%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
E+V+AID+N AN VYKHNF +R NI S + E++ + D ILMSPPCQPFTR G
Sbjct: 32 FEIVSAIDVNPIANEVYKHNFGAETVRNGNILSLTAEKVTKLKVDTILMSPPCQPFTRNG 91
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
DI D R ++ E + +P ++ +L+ENVKGFE S++ ++ + L AGF +Q++
Sbjct: 92 KFNDINDRRSDPFLHICELLDKMPLVEFILMENVKGFENSQACEMYKARLREAGFHYQQY 151
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+LSP QFGVPN+R RYY IAKR A F +++ + T A +
Sbjct: 152 ILSPHQFGVPNTRHRYYCIAKRHG------ADFKWKSEEIITTSQAGYGA--------KQ 197
Query: 191 TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
TL G + T D +Y + LL+ + D+ +++++ CFTKAYTHYAEG
Sbjct: 198 TLVGTIVDTQQ--DALGQYGLKSATLLKHLPLMDVCTPESTNSMCFTKAYTHYAEG 251
>gi|72255517|ref|NP_001026813.1| tRNA (cytosine(38)-C(5))-methyltransferase [Rattus norvegicus]
gi|115311703|sp|Q4G073.1|TRDMT_RAT RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2
gi|71051331|gb|AAH98700.1| TRNA aspartic acid methyltransferase 1 [Rattus norvegicus]
gi|149021112|gb|EDL78719.1| DNA methyltransferase 2 [Rattus norvegicus]
Length = 391
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 146/286 (51%), Gaps = 63/286 (22%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID++T AN VYKHNFP T+L + I+ S+EE + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVSTVANEVYKHNFPHTHLLAKTIEGISLEEFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D++D R + Y+++ +P + L + +LLENVKGFE S +R L+ + GF++QEFL
Sbjct: 89 GDMSDRRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTMEACGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP--------------- 176
LSP+ G+PNSR RY+LIAK CF+ +++ E P
Sbjct: 149 LSPSSLGIPNSRLRYFLIAKL------QSEPLCFQAPGQILMEFPNSGTVQPQEYAVVEE 202
Query: 177 -KLKANTCNP-----------------------------------LLSRMTLHGILDSTH 200
KL+ T P LS L G L+
Sbjct: 203 GKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAADIDRKRQQDSDLSVQMLKGFLE--- 259
Query: 201 PSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
GD +YL+ K LLR + DIV + + CFTK Y Y EG
Sbjct: 260 -DGDT-AQYLLPAKSLLRYALLLDIVKPTSRRSMCFTKGYGSYIEG 303
>gi|338721479|ref|XP_001916681.2| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Equus
caballus]
Length = 392
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 143/282 (50%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 29 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 88
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + Y++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 89 QGDVTDPRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 148
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN--------- 181
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 149 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESEHPEKHAIDA 202
Query: 182 ----------------------TCNPLLSRMTLHGILDSTHPS-GDL------------- 205
P+L ++ +D H DL
Sbjct: 203 ENQIEGKKIEPNIWSDSSDHVLEKQPILFKLETAEEIDRKHQQDSDLSVQMLKDFLEDNV 262
Query: 206 -YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 263 DVNQYFLPPKSLLRYALLLDIVKPTCRRSMCFTKGYGSYIEG 304
>gi|332217175|ref|XP_003257732.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Nomascus
leucogenys]
Length = 393
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 147/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSCDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 201
Query: 181 ------NTCNPLL---SRMTLHG---ILDSTHPSGDLYRR-------------------- 208
P + S M G IL + +++R+
Sbjct: 202 ENKIQEKNIEPNISFDSSMQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|339773547|gb|AEK05180.1| DNA methyltransferase 2 [Schistocerca gregaria]
Length = 199
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+DINT AN VY NFP+T L +NI+S + EEIN M ++ILMSPPCQPFTR GL
Sbjct: 15 EVVAAVDINTVANLVYAANFPQTKLLQKNIESLTAEEINNMKINMILMSPPCQPFTRNGL 74
Query: 72 QKDIADARCTALSYLIETIPAIP-SLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QKD AD R + + + +P + +L+ +LLENVKGFE S +RD+ ++L A F FQEF
Sbjct: 75 QKDTADNRTSPFLHFLRLLPELTGNLKYILLENVKGFEKSEARDMFVNILQEANFIFQEF 134
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSP 154
LLSP QF +PNSRTRYYLIAK+ P
Sbjct: 135 LLSPFQFHIPNSRTRYYLIAKKRP 158
>gi|348536610|ref|XP_003455789.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Oreochromis niloticus]
Length = 382
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 146/284 (51%), Gaps = 50/284 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +VVTAIDINT+AN VYKHNFP T L + I+ +++E N +S D+ILMSPPC
Sbjct: 20 LKESGIPAQVVTAIDINTTANQVYKHNFPDTALWNKTIEGITLDEFNKLSFDMILMSPPC 79
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QPFTR GLQ D+ D R + Y+++ +P + L + +LLENVKGFE S +R + LT
Sbjct: 80 QPFTRIGLQGDVTDPRTKSFLYILDLLPRLQRLPRFILLENVKGFETSSARARLVKTLTE 139
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAK------------------------------- 151
G+ FQE ++SP G+PNSR RY+LIAK
Sbjct: 140 CGYTFQEIMISPISVGIPNSRLRYFLIAKISTEDLNTQAPSKILDFFPHLAESDSSEHPT 199
Query: 152 -RSPAAH-------SSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSG 203
SPA ++ F ET++E K++ N S +++ I + P
Sbjct: 200 FLSPACQGASQPEEGTDVLFKLETTAEAQR---KIRQN------SNLSVKQIKEFLEPQM 250
Query: 204 DL-YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
++ YL+ K LLR V DIV + CFTK Y Y +G
Sbjct: 251 EVNMEPYLLPPKTLLRYGLVLDIVQPTCRRSVCFTKGYGRYVQG 294
>gi|449275603|gb|EMC84405.1| tRNA (cytosine-5-)-methyltransferase, partial [Columba livia]
Length = 376
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 146/284 (51%), Gaps = 47/284 (16%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
S EVV A+D+NT AN VYKHNFP T L + I+ +++E + +S D+ILMSPPCQPFTR
Sbjct: 5 SAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRI 64
Query: 70 GLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
GLQ D++D R + Y+++ +P + L + LLLENVKGFE S +R+ + L GF++Q
Sbjct: 65 GLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVKGFECSSARNELLRTLETCGFKYQ 124
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRS-------------PAAHSSEASFCFET------SS 169
EFLLSPT G+PNSR RY+LIAK P + FE SS
Sbjct: 125 EFLLSPTCLGIPNSRLRYFLIAKLHQEPFPFQAPGQILPRFPDQDLEDLFENKAAGKDSS 184
Query: 170 ELMTE-----------------LPK----LKANTCNPLLSRMT------LHGILDSTHPS 202
L +E LPK K T + + T + + D
Sbjct: 185 SLSSEEKNLDPNIGPDCSSKKSLPKGTFLFKLETVEEMERKHTQDNDSSIQMLKDFLEEE 244
Query: 203 GDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +Y + K LLR + DIV + CFTK Y HY EG
Sbjct: 245 NEEMSQYFLPPKSLLRYAFLLDIVKPTCRRSTCFTKGYGHYVEG 288
>gi|332833684|ref|XP_001151840.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 4
[Pan troglodytes]
gi|397522331|ref|XP_003831225.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Pan
paniscus]
gi|29126973|gb|AAH47733.1| TRNA aspartic acid methyltransferase 1 [Homo sapiens]
gi|410293242|gb|JAA25221.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410348740|gb|JAA40974.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 149/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 201
Query: 183 CNPLLSR-----MTLHG---------ILDSTHPSGDLYRR-------------------- 208
N + + ++ G IL + +++R+
Sbjct: 202 ENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|326921696|ref|XP_003207092.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Meleagris
gallopavo]
Length = 398
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 147/283 (51%), Gaps = 48/283 (16%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A+D+NT AN VYKHNFP T L + I+ +++E + +S D+ILMSPPCQPFTR GL
Sbjct: 28 EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D++D R + Y+++ +P + L + LLLENVKGFE S +R+ + L GF +QEF
Sbjct: 88 QGDVSDPRTKSFLYILDILPRLQKLPKYLLLENVKGFESSSARNELLRTLETCGFEYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAK----------------RSPAAHSSEAS---FCFETSSEL 171
LLSPT G+PNSR RY+LIAK R P + E S E SS L
Sbjct: 148 LLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQILTRFPDQNLEELSKDEVVDEASSSL 207
Query: 172 MT------------------ELPK----LKANTCNPLLSRM------TLHGILDSTHPSG 203
+ LPK K T ++ + ++ + D
Sbjct: 208 PSGEKSLVSNIGSDCSSKNGPLPKEAFLFKLETAEEMVRKHSQDNDPSIQMLQDFLEDEN 267
Query: 204 DLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +Y ++ K L+R + DIV + CFTK Y HY EG
Sbjct: 268 EEMSQYFLAPKSLVRYAFLLDIVKPTCRRSTCFTKGYGHYVEG 310
>gi|410211590|gb|JAA03014.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
gi|410259146|gb|JAA17539.1| tRNA aspartic acid methyltransferase 1 [Pan troglodytes]
Length = 391
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 149/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 201
Query: 183 CNPLLSR-----MTLHG---------ILDSTHPSGDLYRR-------------------- 208
N + + ++ G IL + +++R+
Sbjct: 202 ENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQEDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|410963252|ref|XP_003988179.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Felis catus]
Length = 391
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 145/282 (51%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VY +NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAIDVNTVANEVYAYNFPHTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R +L ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSLLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK F+ +++ E PKL++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLKEFPKLESEHPEKNTIVA 201
Query: 181 -----------NTC----------NPLLSRMTLHGILDSTHPS-GDL------------- 205
N C +L ++ +D H DL
Sbjct: 202 ENKIERKKIEPNICFDNGRQCSGKEAILFKLETIEEIDRKHQQDSDLSVQMLKDFLEDDI 261
Query: 206 -YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DTNQYFLPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSYIEG 303
>gi|198475758|ref|XP_001357145.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
gi|198137946|gb|EAL34212.2| Mt2 [Drosophila pseudoobscura pseudoobscura]
Length = 347
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 20/235 (8%)
Query: 13 VVTAIDINTSANSVYKHNFP-RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+V A+D+NT AN+VY NF +++ RNIQS S +E++ + ++LMSPPCQP TR GL
Sbjct: 28 IVAAMDVNTVANAVY--NFALNCHVKTRNIQSLSEKEVSKLGATMLLMSPPCQPHTRQGL 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP +LQ +L+ENVKGFE S++R+ L +AGF ++EF+
Sbjct: 86 QRDTEDKRSDALTHLCTLIPQCETLQYILMENVKGFECSQARNQFVEALEKAGFYWREFI 145
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ + + +F E M E P + +
Sbjct: 146 LTPTQFNVPNTRYRYYCIARK-----TKDFAFAGGKIWEEMPESPSTEQSVSQ------- 193
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ IL+ ++ YLV D L +R V DI++ + + CFTK YTHY EG
Sbjct: 194 ISAILED-----NVSCEYLVPDDVLTKRVLVMDIIHPTQNRSMCFTKGYTHYTEG 243
>gi|195160038|ref|XP_002020883.1| GL16217 [Drosophila persimilis]
gi|194117833|gb|EDW39876.1| GL16217 [Drosophila persimilis]
Length = 347
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 20/235 (8%)
Query: 13 VVTAIDINTSANSVYKHNFP-RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+V A+D+NT AN+VY NF +++ RNIQS S +E++ + ++LMSPPCQP TR GL
Sbjct: 28 IVAAMDVNTVANAVY--NFALNCHVKTRNIQSLSEKEVSKLGATMLLMSPPCQPHTRQGL 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
Q+D D R AL++L IP +LQ +L+ENVKGFE S++R+ L +AGF ++EF+
Sbjct: 86 QRDTEDKRSDALTHLCTLIPQCETLQYILMENVKGFECSQARNQFVEALEKAGFYWREFI 145
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
L+PTQF VPN+R RYY IA++ + + +F E M E P + +
Sbjct: 146 LTPTQFNVPNTRYRYYCIARK-----TEDFAFAGGKIWEEMPESPSTEQSVSQ------- 193
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ IL+ ++ YLV D L +R V DI++ + + CFTK YTHY EG
Sbjct: 194 ISAILED-----NVSCEYLVPDDVLTKRVLVMDIIHPTQNRSMCFTKGYTHYTEG 243
>gi|241832196|ref|XP_002414890.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215509102|gb|EEC18555.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 361
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 135/237 (56%), Gaps = 14/237 (5%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A+D+NT+AN+ Y NFP T L RN+QS + E++A+ PDV+ MSPPCQPFTR GLQ
Sbjct: 42 VVAAVDVNTTANATYAFNFPETRLLQRNVQSLTARELDALRPDVLTMSPPCQPFTRQGLQ 101
Query: 73 KDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
D D R + L+ +P + P+ +LLENVKGFE S + D +L G+
Sbjct: 102 LDSQDPRSASFLSLLRVLPTLKHPPTY--ILLENVKGFETSSTCDAFLDVLRDGGYHAHR 159
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
+LL+PTQFGVPNSR R+Y +AK +P S + C +E E P P
Sbjct: 160 YLLTPTQFGVPNSRLRFYCLAKLNPLRFSDCPTAC---DAECNQEPPPNVTRCDRP---- 212
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L+ L+ T D YL+ D+ L R ++ DI + +++T CFTK Y HY EG
Sbjct: 213 RELYDFLEQT--DEDSCSDYLLPDRVLSRFAYILDIADATSTNTCCFTKGYGHYVEG 267
>gi|355562318|gb|EHH18912.1| tRNA (cytosine-5-)-methyltransferase [Macaca mulatta]
Length = 391
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 145/282 (51%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK F+ +++ + PK+++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMQFPKIESVYPQKYTMDV 201
Query: 181 ------NTCNPLLS------RMTLHGILDSTHPSGDLYRR-------------------- 208
P +S R IL + +++R+
Sbjct: 202 ENKIQEKNIEPNISFDSSTQRSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|405958955|gb|EKC25033.1| tRNA (cytosine-5-)-methyltransferase [Crassostrea gigas]
Length = 373
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 148/255 (58%), Gaps = 20/255 (7%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
S E++ AID+NT+AN +YKHNFP +NL I+S S +++ M D+I+MSPPCQPFT
Sbjct: 21 GISYEIIAAIDVNTTANKIYKHNFPESNLMDCGIESLSATQLDEMKIDMIVMSPPCQPFT 80
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
R G + D D R + +L+ +P + + + +L+ENVKGFE S + + L + F
Sbjct: 81 RVGKKLDAEDIRTKSFIHLLSLLPRLNNCPKYILVENVKGFEDSETCLKLRETLMKCNFT 140
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPA----AHSSEASF-----------CFETSSEL 171
+QEFLL+P QFG+PNSR RYYLIAKRSP A+++E C +++
Sbjct: 141 YQEFLLTPLQFGIPNSRLRYYLIAKRSPLKFSFANTTEVYIPAATCPICRESCLQSAGHN 200
Query: 172 MTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKAS 231
M +L + + + + + L+ P + ++ ++++ KD L+RF V DIV
Sbjct: 201 MRQLSEGEEEEEDKYPCCL-VQDFLEDQPP--EYFQPFMLTRKD-LKRFIVMDIVFPCLQ 256
Query: 232 STNCFTKAYTHYAEG 246
T CFTK Y H+ EG
Sbjct: 257 KTTCFTKRYGHFMEG 271
>gi|312385012|gb|EFR29606.1| hypothetical protein AND_01274 [Anopheles darlingi]
Length = 348
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 15/237 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ E+V+AID+N ANSVY HNF R NI S + + I+ ++ D +LMSPPCQPFTR
Sbjct: 35 AFEIVSAIDVNPIANSVYTHNFGEKAARNGNILSLTAKTISKLAIDTVLMSPPCQPFTRN 94
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G DI D R ++ E + IP+++ +L+ENVKGFEGS++ L + L AGF +QE
Sbjct: 95 GKFNDIHDRRSDPFLHICELLHEIPTVEFILMENVKGFEGSQACALYKARLKEAGFEYQE 154
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
++LSP QFG+PN+R RYY +AKR +A T P T PLL+
Sbjct: 155 YVLSPHQFGIPNTRHRYYCLAKRKGKGFKRKAHGIIVTH-------PSKDGGTV-PLLT- 205
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
I D PS + +YL+ + L + + D+ +++++ CFTKAYTHYAEG
Sbjct: 206 -----IGDMVDPSEN-DEKYLLKEATLRKHLPIMDVCTPESNNSMCFTKAYTHYAEG 256
>gi|395827473|ref|XP_003786926.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase [Otolemur
garnettii]
Length = 399
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 147/284 (51%), Gaps = 41/284 (14%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +VV AID+NT AN VYK+NFP+T+L + I+ ++EE + +S D+ILMSPPC
Sbjct: 20 LRESGIPAQVVAAIDVNTVANEVYKYNFPQTHLLAKTIEGITLEEFDRLSCDMILMSPPC 79
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QPFTR GLQ D+ D R + Y ++ +P + L + +LLENVKGFE S +RDL+ +
Sbjct: 80 QPFTRIGLQGDMTDPRTNSFLYFLDILPRLRKLPKYILLENVKGFEVSSTRDLLIQTMEN 139
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAK--RSPAAHSSEASFCFE-------------T 167
GF++QEFLLSPT G+PNSR RY+LIAK P + E
Sbjct: 140 CGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQNPGQVLMEFPKIECEYPQKCSI 199
Query: 168 SSELMTELPKLKANTC----------NPLLSRMTLHGILDSTHP-----SGDLYRRYLVS 212
+E E K++ + C + +L ++ ++ H S + + +L
Sbjct: 200 DAENKIEEKKIEPSICCDSSTQCSGRDAVLYKLETAEEIERKHQQDNDLSVQMLKGFLEE 259
Query: 213 DKD----------LLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
D D LLR + DIV + CFTK Y Y EG
Sbjct: 260 DIDMNQYFLPPQSLLRYALLLDIVRPTCRRSTCFTKGYGSYIEG 303
>gi|380790109|gb|AFE66930.1| tRNA (cytosine(38)-C(5))-methyltransferase [Macaca mulatta]
Length = 391
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 146/282 (51%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK F+ +++ + PK+++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMQFPKIESVYPQKYTMDV 201
Query: 181 ------NTCNPLLS--RMTLH----GILDSTHPSGDLYRR-------------------- 208
P +S T H IL + +++R+
Sbjct: 202 ENKIQEKNIEPNISFDSSTQHSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|4758184|ref|NP_004403.1| tRNA (cytosine(38)-C(5))-methyltransferase [Homo sapiens]
gi|17374834|sp|O14717.1|TRDMT_HUMAN RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
HsaIIP; Short=DNA MTase homolog HsaIIP; Short=M.HsaIIP;
AltName: Full=PuMet
gi|2627431|gb|AAC51939.1| putative DNA methyltransferase [Homo sapiens]
gi|2894544|emb|CAA11272.1| DNA methyltransferase [Homo sapiens]
gi|47496579|emb|CAG29312.1| DNMT2 [Homo sapiens]
gi|119606623|gb|EAW86217.1| hCG23994, isoform CRA_a [Homo sapiens]
gi|158256270|dbj|BAF84106.1| unnamed protein product [Homo sapiens]
gi|167887559|gb|ACA05983.1| tRNA aspartic acid methyltransferase 1 variant 3 [Homo sapiens]
gi|167887563|gb|ACA05987.1| tRNA aspartic acid methyltransferase 1 variant 4 [Homo sapiens]
Length = 391
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 149/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 201
Query: 183 CNPLLSR-----MTLHG---------ILDSTHPSGDLYRR-------------------- 208
N + + ++ G IL + +++R+
Sbjct: 202 ENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|296206220|ref|XP_002750112.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform 1
[Callithrix jacchus]
Length = 391
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 150/282 (53%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VY+ NFP T L + I+ +++E + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYRFNFPHTQLLAKTIEGITLQEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQRLPKYILLENVKGFEVSSTRDLLLQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESAHPQKYAMDV 201
Query: 183 CNPLLSRMTLHGI-LDST-HPSG------------DLYRR-------------------- 208
N + + T I DS+ H SG +++R+
Sbjct: 202 ENKIQGKNTDPNISFDSSIHCSGKDAILFKLETAEEIHRKNQQDSDLSVQMLKDFLEDDV 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSMCFTKGYGSYIEG 303
>gi|355782667|gb|EHH64588.1| tRNA (cytosine-5-)-methyltransferase [Macaca fascicularis]
Length = 391
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 147/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAVDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILNILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
LLSPT G+PNSR RY+LIAK F+ +++ + PK+++ +
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMQFPKIESVHPQKYTVDV 201
Query: 183 CNPLLSRMTLHGIL--DSTHPSG------------DLYRR-------------------- 208
N + + I ST SG +++R+
Sbjct: 202 ENKIQEKNIEPNISFDSSTQGSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|2895945|gb|AAC39764.1| putative DNA cytosine methyltransferase DNMT2 [Homo sapiens]
Length = 391
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 149/282 (52%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
+LSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 148 ILSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 201
Query: 183 CNPLLSR-----MTLHG---------ILDSTHPSGDLYRR-------------------- 208
N + + ++ G IL + +++R+
Sbjct: 202 ENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|431917686|gb|ELK16951.1| tRNA (cytosine-5-)-methyltransferase [Pteropus alecto]
Length = 391
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 142/282 (50%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+N AN VY +NFP T L + I+ ++EE +S D+ILMSPPCQPFTR GL
Sbjct: 28 QVVAAVDVNNIANEVYNYNFPHTQLLAKTIEGITLEEFERLSFDMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDVTDPRTNSFIYILDILPRLQKLPKFILLENVKGFEISSTRDLLIQTIESCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN--PLLS 188
LLSPT G+PNSR RY+L+AK F+ +++ E PK++ + +
Sbjct: 148 LLSPTSLGIPNSRLRYFLVAKL------QSEPLPFQAPGQVLMEFPKIECEHTQKRAVDA 201
Query: 189 RMTLHG--------------------ILDSTHPSGDLYRR-------------------- 208
T+ G IL +G++ R+
Sbjct: 202 ENTIEGKKIEPNVSFDSSKQCSGKEAILFKLETAGEIERKHQQDSDLSVQMLKDFLEDDA 261
Query: 209 ----YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMSQYFLPPKPLLRYALLLDIVKPTCRRSMCFTKGYGRYIEG 303
>gi|126341517|ref|XP_001377353.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Monodelphis
domestica]
Length = 384
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 143/290 (49%), Gaps = 63/290 (21%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
S EVV A+D+NT AN VYKHNFP T L + I+ +++E N +S ++ILMSPPCQPFTR
Sbjct: 17 SAEVVAAVDVNTIANEVYKHNFPHTQLWAKTIEGITLKEFNQLSFNMILMSPPCQPFTRI 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
GLQ D+ D R + +++ +P + L +LLENVKGFE S +RDL L GF++Q
Sbjct: 77 GLQGDVTDPRTKSFLHILHVLPKLQKLPTYILLENVKGFEVSSTRDLFVQTLENCGFKYQ 136
Query: 129 EFLLSPTQFGVPNSRTRYYLIAK------------------------------------- 151
EFLLSP G+PNSR RY+LIAK
Sbjct: 137 EFLLSPISLGIPNSRLRYFLIAKLQSEPLPFQVLGQVLVEIPTADSANSQKQPATLDLGE 196
Query: 152 ---------RSPAAHSSEAS------FCFETSSELMTELPKLKANTCNPLLSRMTLHGIL 196
P A ++ S F ET+ E+ KL+ + S +++ +
Sbjct: 197 NNEGRKTEPNPPQAGDTQCSGKETFLFKLETAEEIER---KLQQD------SDLSVQMLK 247
Query: 197 DSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
D D+ +Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 248 DFLEDDSDM-SQYFLPPKALLRYALLLDIVQPTCRRSTCFTKGYGSYIEG 296
>gi|402913885|ref|XP_003919381.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Papio
anubis]
Length = 391
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 57/284 (20%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + ++++ +P + L + +LLENVKGFE S +RDL + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLFIQTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
LLSPT G+PNSR RY+LIAK F+ +++ + PK+++ +P M
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMQFPKIES--VHPQKDTM 199
Query: 191 TLHGILD------------STHPSG------------DLYRR------------------ 208
+ + ST SG +++R+
Sbjct: 200 DVENKIQEKNIEPNISFDSSTQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLED 259
Query: 209 ------YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 260 DTDMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 303
>gi|112818953|gb|ABI23560.1| DNA methyltransferase 2 [Artemia franciscana]
Length = 379
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 143/265 (53%), Gaps = 32/265 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+++VV + +IN +A Y+ NF + RNI S S EE+ + + I MSPPCQPFTR
Sbjct: 27 NIQVVKSFEINVNAVKTYQENFGHDVVSNRNILSLSTEELFRQNVNAIFMSPPCQPFTRL 86
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G + D+ D RC A ++++ +P P++Q LL+ENV GFE S+ RD + +L GF E
Sbjct: 87 GKKLDVNDDRCNAFHHVLKLLPRSPNIQYLLIENVYGFESSKMRDTMLEILQSCGFYTIE 146
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPA------AHSS-----------------EASFCFE 166
FLLSPT FGVPNSR RYYL+A+++ H+S +AS C
Sbjct: 147 FLLSPTDFGVPNSRLRYYLLARKNKKFTFCKHDHTSIVKEFPYCTCRVKSLNDQASICSN 206
Query: 167 TSSELMTELPKLKANTC-----NPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFH 221
E+ T + L N L++ LH LD D+ +Y V DK LLR +
Sbjct: 207 CQREVNTNISSLVQQNAGNAAQNSLVNPGKLHSYLDK---ETDI-EQYAVPDKILLRYGN 262
Query: 222 VFDIVNGKASSTNCFTKAYTHYAEG 246
+ D+ + SS+ CFTK YTH EG
Sbjct: 263 ILDLRTFQDSSSCCFTKGYTHLVEG 287
>gi|67514595|ref|NP_001020002.1| tRNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|66766328|dbj|BAD99025.1| DNA methyltransferase 2 [Gallus gallus]
Length = 398
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 150/293 (51%), Gaps = 48/293 (16%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
+ L EVV A+D+NT AN VYKHNFP T L + I+ +++E + +S D+ILMSP
Sbjct: 18 QALKESCICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSP 77
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSML 120
PCQPFTR GLQ D++D R + Y+++ +P + + LLLENVKGFE S +R+ + L
Sbjct: 78 PCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENVKGFESSSARNELLRTL 137
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK----------------RSPAAH------- 157
GF++QEFLLSPT G+PNSR RY+LIAK R P +
Sbjct: 138 ETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFFFHVPGQILTRLPDQNLEELSKD 197
Query: 158 -----------SSEASFCFETSSELMTE---LPK----LKANTCNPLLSRM------TLH 193
S E S TS + ++ LPK K T ++ + ++
Sbjct: 198 KVVDKTGSXFPSGEKSLDSNTSPDCSSKKGPLPKGAFLFKLETAEQMVRKHRQDNDPSIQ 257
Query: 194 GILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ D + +Y ++ K L+R + DIV + CFTK Y HY EG
Sbjct: 258 MLEDFLEEENEEMSQYFLAPKSLVRYAFLLDIVKPTCRRSTCFTKGYGHYVEG 310
>gi|170063953|ref|XP_001867327.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
gi|167881402|gb|EDS44785.1| DNA (cytosine-5)-methyltransferase [Culex quinquefasciatus]
Length = 345
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 133/237 (56%), Gaps = 19/237 (8%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
VV A++IN AN++Y HNF NI S + E I+ + +VILMSPPCQPFTR G
Sbjct: 39 FRVVAAMEINPVANTIYNHNFGPGAATNSNILSLTPERIDQLGANVILMSPPCQPFTRNG 98
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
KD+ D R +L + + IP ++ +LLENVKGFE S++ + LT AGF F+EF
Sbjct: 99 HFKDVEDRRADPFVHLCDLLDKIPQVRFVLLENVKGFERSQACEQYKVRLTAAGFFFREF 158
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+LSP +GVPN+R RYY +AKR+P FE ++ + P K
Sbjct: 159 ILSPHNYGVPNTRHRYYCVAKRTP----------FEGPTQEIIVKPHNK--------HVK 200
Query: 191 TLHGILDSTHP-SGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+L I + P GD RYL+ L +R + D+ + ++ CFTKAYTHYAEG
Sbjct: 201 SLKSIGEIVEPDDGDHLNRYLLKPDLLRKRLAIMDVCTPDSRNSMCFTKAYTHYAEG 257
>gi|432099759|gb|ELK28794.1| tRNA (cytosine(38)-C(5))-methyltransferase [Myotis davidii]
Length = 502
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 146/291 (50%), Gaps = 63/291 (21%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+N AN VYK+NFP T L + I+ S+EE + +S ++ILMSPPCQPFTR GLQ
Sbjct: 130 VVAAIDVNDVANEVYKYNFPETQLLAKTIEGISLEEFDRLSFNMILMSPPCQPFTRIGLQ 189
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R + Y+++ +P + +L + +LLENVKGFE S +RDL+ + GF++QEFL
Sbjct: 190 GDVTDPRTNSFLYILDILPRLQTLPKYILLENVKGFEVSSARDLLIKTIENCGFQYQEFL 249
Query: 132 LSPT----------QFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA- 180
LSPT Q G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 250 LSPTSVVDRDLFYFQLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKMESE 303
Query: 181 --------------------NTC----------NPLLSRMTLHGILDSTHPS-GDL---- 205
N C P+L ++ ++ H DL
Sbjct: 304 HPQQHAIDAVNKIEGKKIEPNICFDSSRQCSGKEPILFKLETAEEIERKHQQDSDLSVQM 363
Query: 206 ----------YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 364 LKDFLEDDIDTNQYFLPPKSLLRYALLLDIVTPTCRRSMCFTKGYGRYIEG 414
>gi|432964261|ref|XP_004086901.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Oryzias
latipes]
Length = 410
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 142/276 (51%), Gaps = 34/276 (12%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L EVV A+DINT AN +YKHNFP T L ++I+ ++E+ +S D+++MSPPC
Sbjct: 20 LKESGVPAEVVAAVDINTMANQIYKHNFPDTPLWNKSIEGLTLEDFAGLSVDMVMMSPPC 79
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QPFTR GLQ D++D R + +++ +P + P + +LLENVKGFE S +RD + + LT
Sbjct: 80 QPFTRIGLQGDVSDPRTKSFLHILHLLPRLHRPP-RFILLENVKGFETSAARDRLINTLT 138
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA-----AHSSEASFCFETSSELMTELP 176
G+ FQE + SPT G+PNSR RY+LIA+RS S C + + + + +
Sbjct: 139 ECGYVFQEIMASPTSVGIPNSRLRYFLIARRSAENMNIHTGSKVWDVCAQPAEDDLALVS 198
Query: 177 KLKANTCNPLLSRMTLHGILDSTHPSGDLYRR--------------------------YL 210
K + P + + +L L R+ YL
Sbjct: 199 KAACSGTTPPEEKASHGLVLYKLETEMQLQRKTTQNSNPDVKQIQDFLEAGSQVNVEEYL 258
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ K LLR + DIV + + CFTK Y Y EG
Sbjct: 259 LPPKTLLRYSLLLDIVQPTSRRSVCFTKGYGRYVEG 294
>gi|161016803|ref|NP_034197.3| tRNA (cytosine(38)-C(5))-methyltransferase [Mus musculus]
gi|20141317|sp|O55055.2|TRDMT_MOUSE RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=DNA methyltransferase homolog
MmuIIP; Short=DNA MTase homolog MmuIIP; Short=M.MmuIIP;
AltName: Full=Met-2
gi|2627433|gb|AAC53529.1| putative DNA methyltransferase [Mus musculus]
gi|56971714|gb|AAH87892.1| TRNA aspartic acid methyltransferase 1 [Mus musculus]
gi|148676105|gb|EDL08052.1| DNA methyltransferase 2 [Mus musculus]
Length = 415
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 146/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYKHNFP T+L + I+ S+E+ + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKHNFPHTHLLSKTIEGISLEDFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R T+ Y+++ +P + L + +LLENVKGFE S +R L+ + GF++QEFL
Sbjct: 89 GDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL---------KANT 182
LSP+ G+PNSR RY+LIAK F F+ +++ E PK+
Sbjct: 149 LSPSSLGIPNSRLRYFLIAKL------QSEPFPFQAPGQILMEFPKIVTVEPQKYAVVEE 202
Query: 183 CNPLLSRMT--LHGILDSTHPSGD---LYRRYLVSDKD------------LLRRF----- 220
P + R + ST SG L++ V ++D +L+ F
Sbjct: 203 SQPRVQRTGPRICAESSSTQSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGD 262
Query: 221 ---------------HVFDIVNGKASSTNCFTKAYTHYAEG 246
+ DIV + + CFTK Y Y EG
Sbjct: 263 TDEYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEG 303
>gi|26341152|dbj|BAC34238.1| unnamed protein product [Mus musculus]
Length = 415
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 146/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYKHNFP T+L + I+ S+E+ + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKHNFPHTHLLSKTIEGISLEDFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R T+ Y+++ +P + L + +LLENVKGFE S +R L+ + GF++QEFL
Sbjct: 89 GDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL---------KANT 182
LSP+ G+PNSR RY+LIAK F F+ +++ E PK+
Sbjct: 149 LSPSSLGIPNSRLRYFLIAKL------QSEPFPFQAPGQILMEFPKIVTVEPQKYAVVEE 202
Query: 183 CNPLLSRMT--LHGILDSTHPSGD---LYRRYLVSDKD------------LLRRF----- 220
P + R + ST SG L++ V ++D +L+ F
Sbjct: 203 SQPRVQRTGPRICAESSSTQSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGD 262
Query: 221 ---------------HVFDIVNGKASSTNCFTKAYTHYAEG 246
+ DIV + + CFTK Y Y EG
Sbjct: 263 TDEYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEG 303
>gi|348041390|ref|NP_001004959.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus (Silurana)
tropicalis]
Length = 395
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 143/275 (52%), Gaps = 54/275 (19%)
Query: 20 NTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADAR 79
NT AN VYK+NFP T L ++I+ S++E++A+S D+ILMSPPCQPFTR GLQ DI+D R
Sbjct: 37 NTIANEVYKYNFPYTPLWPKSIEGLSLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 96
Query: 80 CTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 138
+ Y+++ +P + +LLENVKGFE S +R+ + L + G+ +QEFLLSPT G
Sbjct: 97 TKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREALIRTLEKGGYAYQEFLLSPTCLG 156
Query: 139 VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK--------------------- 177
+PNSR RY+LIAK + F F T+S+++ E P
Sbjct: 157 IPNSRLRYFLIAKL------QKEPFAFPTTSKILEEFPSQCPGSKRIIHCSESNPQARVE 210
Query: 178 -------LKANTCNP---LLSRM----------------TLHGILDSTHPSGDLYRRYLV 211
L C+P +L ++ ++ + D + + +Y +
Sbjct: 211 QKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRMLQDFLEGNVEEMSQYFL 270
Query: 212 SDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
K LLR + DIV + CFTK Y HY EG
Sbjct: 271 PPKSLLRYALILDIVKPTCRRSTCFTKGYGHYVEG 305
>gi|26325124|dbj|BAC26316.1| unnamed protein product [Mus musculus]
Length = 415
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 113/167 (67%), Gaps = 7/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYKHNFP T+L + I+ S+E+ + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKHNFPHTHLLSKTIEGISLEDFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R T+ Y+++ +P + L + +LLENVKGFE S +R L+ + GF++QEFL
Sbjct: 89 GDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
LSP+ G+PNSR RY+LIAK F F+ +++ E PK+
Sbjct: 149 LSPSSLGIPNSRLRYFLIAKL------QSEPFPFQAPGQILMEFPKI 189
>gi|49523271|gb|AAH75465.1| MGC89267 protein [Xenopus (Silurana) tropicalis]
Length = 379
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 143/275 (52%), Gaps = 54/275 (19%)
Query: 20 NTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADAR 79
NT AN VYK+NFP T L ++I+ S++E++A+S D+ILMSPPCQPFTR GLQ DI+D R
Sbjct: 21 NTIANEVYKYNFPYTPLWPKSIEGLSLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 80
Query: 80 CTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 138
+ Y+++ +P + +LLENVKGFE S +R+ + L + G+ +QEFLLSPT G
Sbjct: 81 TKSFLYVLDVLPRLKKQPAYILLENVKGFETSEAREALIRTLEKGGYAYQEFLLSPTCLG 140
Query: 139 VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK--------------------- 177
+PNSR RY+LIAK + F F T+S+++ E P
Sbjct: 141 IPNSRLRYFLIAKL------QKEPFAFPTTSKILEEFPSQCPGSKRIFHCSESNPQAGVE 194
Query: 178 -------LKANTCNP---LLSRM----------------TLHGILDSTHPSGDLYRRYLV 211
L C+P +L ++ ++ + D + + +Y +
Sbjct: 195 QKYSSCPLSGTDCDPEKTVLYKLETAVELQRKQTQDNDSSVRMLQDFLEGNVEEMSQYFL 254
Query: 212 SDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
K LLR + DIV + CFTK Y HY EG
Sbjct: 255 PPKSLLRYALILDIVKPTCRRSTCFTKGYGHYVEG 289
>gi|47207937|emb|CAF91437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 405
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 149/295 (50%), Gaps = 60/295 (20%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+DINT+AN VY+HNFP T L + I+ ++EE N +S DVILMSPPCQPFTR GL
Sbjct: 25 QVVAAVDINTTANDVYRHNFPSTALLNKTIEGITLEEFNQLSFDVILMSPPCQPFTRIGL 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q+D+AD+R + ++++ +P + +LLENVKGFE S +R+ + L G+ QE
Sbjct: 85 QRDVADSRTRSFLHVVDLLPRLSKAPVFILLENVKGFEKSAAREYLLRTLRECGYAVQEM 144
Query: 131 LLSPTQFGVPNSRTRYYLIAKRS------------------PAAHSSEASF---CFETS- 168
L+SPT FG+PNSR RYYL+AK S AA S ++F C +
Sbjct: 145 LVSPTHFGIPNSRLRYYLLAKLSGQKGKLGCAEQGGDQAGQKAAVSLSSAFQHLCLDADG 204
Query: 169 ---SELMTELPKL--------------------KANTCNPLLS-------------RMTL 192
S+ TE P + TC LL +++
Sbjct: 205 LQISDDSTEDPTPAPPSSSSSSPSPFPPQVCAPEYKTCPSLLKATLEAQKKKNQNHNLSV 264
Query: 193 HGILDSTHPSGDL-YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
I D P +L ++ + K LLR + DIV + CFTK Y Y EG
Sbjct: 265 KQIQDFLEPQENLNLDQHFLPPKILLRYAQLLDIVRPTCRRSICFTKGYGKYVEG 319
>gi|340381658|ref|XP_003389338.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Amphimedon queenslandica]
Length = 373
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 142/244 (58%), Gaps = 17/244 (6%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+L+++ A+DINT+AN VYKHNFP T + RNI S +E+++ ++ +SPPCQPFT
Sbjct: 52 GLNLKILAAVDINTTANQVYKHNFPNTKVLQRNILGLSAQELDSFLANLFTLSPPCQPFT 111
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPS-LQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
R G +D D R + +L+ + A+ Q +++ENVKGFE SR+R +L G+
Sbjct: 112 RQGKNEDDIDYRTDSFFHLMGILSAMQKPPQYIMMENVKGFELSRTRGHFVHVLKELGYT 171
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPL 186
FQE+L+SP QFG+PNSR RYYL+A+ SP + +A+ +T L +P
Sbjct: 172 FQEYLISPKQFGIPNSRLRYYLLARLSP--RNFKAAPLQDTVEHLKYYIPT--------- 220
Query: 187 LSRMTLHGILDSTHPSGDL----YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTH 242
S +H D + DL +++LV D+ L + DIV+ K+ S+ CFT+ Y H
Sbjct: 221 -SFHDIHLKCDISSYLDDLSEIDVQQFLVPDRILEKYAQGLDIVSAKSHSSCCFTRGYYH 279
Query: 243 YAEG 246
YA G
Sbjct: 280 YAVG 283
>gi|403278153|ref|XP_003930688.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Saimiri
boliviensis boliviensis]
Length = 391
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 144/282 (51%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VY++NFP T L + I+ +++E + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAVDVNTVANEVYRYNFPHTQLLAKTIEGITLQEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQRLPKYILLENVKGFEVSSTRDLLLRTIENCGFQYQEF 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 148 LLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESAHPQKYALDV 201
Query: 181 -------NT-----------CNP----LLSRMTLHGILDSTHPSGDL----YRRYLVSD- 213
NT C+ L T I DL + +L D
Sbjct: 202 EYKIQGKNTEPNVSFDSSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVQMLKDFLEDDI 261
Query: 214 ---------KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
K LLR + DIV + CFTK Y Y EG
Sbjct: 262 DMNQYLLPPKSLLRYALLLDIVQPTCRRSMCFTKGYGSYVEG 303
>gi|2895947|gb|AAC40130.1| putative DNA cytosine methyltransferase DNMT2 [Mus musculus]
Length = 415
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 145/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYKHNFP T+L + I+ S+E+ + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKHNFPHTHLLSKTIEGISLEDFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R T+ Y+++ +P + L + +LLENVKGFE S +R L+ + GF++QEFL
Sbjct: 89 GDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQYQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL---------KANT 182
LSP+ G+PNSR RY LIAK F F+ +++ E PK+
Sbjct: 149 LSPSSLGIPNSRLRYSLIAKL------QSEPFPFQAPGQILMEFPKIVTVEPQKYAVVEE 202
Query: 183 CNPLLSRMT--LHGILDSTHPSGD---LYRRYLVSDKD------------LLRRF----- 220
P + R + ST SG L++ V ++D +L+ F
Sbjct: 203 SQPRVQRTGPRICAESSSTQSSGKDTILFKLETVEERDRKHQQDSDLSVQMLKDFLEDGD 262
Query: 221 ---------------HVFDIVNGKASSTNCFTKAYTHYAEG 246
+ DIV + + CFTK Y Y EG
Sbjct: 263 TDEYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEG 303
>gi|354482485|ref|XP_003503428.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Cricetulus griseus]
gi|344245952|gb|EGW02056.1| tRNA (cytosine-5-)-methyltransferase [Cricetulus griseus]
Length = 391
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 146/281 (51%), Gaps = 53/281 (18%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV AID+NT AN VYKHNFP T+L + I+ S+EE + +S ++ILMSPPCQPFTR GLQ
Sbjct: 29 VVAAIDVNTVANEVYKHNFPHTHLLAKTIEGISLEEFDKLSFNMILMSPPCQPFTRIGLQ 88
Query: 73 KDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D+ D R + Y+++ +P + L + +LLENVKGFE S +R L+ + GF+ QEFL
Sbjct: 89 GDMTDPRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRGLLIQTIEACGFQHQEFL 148
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL------------- 178
LSP+ G+PNSR RY+LIAK F+ +++ E PK+
Sbjct: 149 LSPSSLGIPNSRLRYFLIAKL------QSEPLPFQAPDQILMEFPKIATIQTQSYAVVAE 202
Query: 179 --------KANTC-----------NPLLSRMTLHGILDSTHPS-GDLYRRYL---VSDKD 215
+ +TC + +L ++ +D H DL + L + D+D
Sbjct: 203 NTLRVKRPEPSTCFDSSSTQYSRKDSILFKLETAEEIDRKHQQDNDLSVQMLKDFLEDED 262
Query: 216 LLRRF----------HVFDIVNGKASSTNCFTKAYTHYAEG 246
+ F + DIV + + CFTK Y Y EG
Sbjct: 263 TSQYFLPPKLLLRYALLLDIVKPTSRRSMCFTKGYGSYIEG 303
>gi|326428358|gb|EGD73928.1| hypothetical protein PTSG_05624 [Salpingoeca sp. ATCC 50818]
Length = 512
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 138/261 (52%), Gaps = 33/261 (12%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINA-MSPDVILMSPPCQPFTRTGL 71
V+ A DIN +AN VY+HNFP T + R I+S E + D+ LMSPPCQPFTRTG
Sbjct: 43 VLRAFDINDTANKVYRHNFPETPVWQRLIESIPRERFEGKLQADMYLMSPPCQPFTRTGK 102
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q+ I D R T+L ++++ I + + + +L+ENVKGFE S +R + S L + FQEF
Sbjct: 103 QQGIEDKRSTSLRFILDLITTMKTPPRYILVENVKGFESSNARQPLISALQSRDYSFQEF 162
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+LSP QFG+PNSR RY+L+A R+P S + ++ +P L + ++
Sbjct: 163 ILSPDQFGIPNSRLRYFLVAVRAPLQLPSPP------TGTVLYHIPTLGGAFADGYSPQI 216
Query: 191 TLHGILDSTH---PSGDLYRRY----------------------LVSDKDLLRRFHVFDI 225
H L P R + LV K +LR +FDI
Sbjct: 217 AAHSFLPPAPQQVPGVPPVRPWTLRPVRAVGAYLSADEGEIAANLVPMKVVLRHGQLFDI 276
Query: 226 VNGKASSTNCFTKAYTHYAEG 246
V+ + T CFTKAY+HYAEG
Sbjct: 277 VDATSHRTMCFTKAYSHYAEG 297
>gi|349501042|ref|NP_001079673.2| tRNA (cytosine(38)-C(5))-methyltransferase [Xenopus laevis]
Length = 396
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 139/278 (50%), Gaps = 57/278 (20%)
Query: 20 NTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADAR 79
NT+AN VYK+NFP T L + I+ +++E++A+S D+ILMSPPCQPFTR GLQ DI+D R
Sbjct: 35 NTNANKVYKYNFPHTPLWPKTIEGITLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 94
Query: 80 CTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 138
+ Y+++ +P + L +LLENVKGFE S +R+ + L + G+ +QEFLLSPT G
Sbjct: 95 AKSFLYVLDILPRLKKLPAYILLENVKGFESSEAREALIGTLQKCGYVYQEFLLSPTCLG 154
Query: 139 VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL--------------------PKL 178
+PNSR RY+LIAK F F S+ ++ E P+
Sbjct: 155 IPNSRLRYFLIAKLQ------TEPFAFPISNTILEEFPSQHSIDPGRRRVIHCSENNPQA 208
Query: 179 KANTCNPLLS-RMTLHG-----------------------------ILDSTHPSGDLYRR 208
A+ NP T HG + D S + +
Sbjct: 209 GADQKNPSCPFSGTDHGPEKTFLYKLETAQELERKQGQDNDASVRMLQDFLETSVEEMSQ 268
Query: 209 YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
Y + K LLR + DIV + CFTK Y HY EG
Sbjct: 269 YFLPPKSLLRYALILDIVRPTCRRSTCFTKGYGHYVEG 306
>gi|327274474|ref|XP_003222002.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Anolis
carolinensis]
Length = 391
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 140/286 (48%), Gaps = 61/286 (21%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A+D+NT AN VY HNF T L + I+ S++E N ILMSPPCQPFTR G
Sbjct: 28 EIVAAVDVNTVANEVYTHNFCTTPLWPKTIEGISLKEFNKX----ILMSPPCQPFTRIGQ 83
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q+D++D R + Y+++ +P + L + LLLENVKGFE S +RD + L + GF +QEF
Sbjct: 84 QRDVSDPRTRSFLYILDILPRLAKLPKYLLLENVKGFETSSARDELIRTLEKCGFIYQEF 143
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSPT G+PN+R RY+LIA+ F F +++T+ P
Sbjct: 144 LLSPTCLGIPNARLRYFLIARL------QTEPFPFHVPGKILTDFPNQDQVDSERSRCST 197
Query: 181 ---NTCNPLLSRMTLHGILDS--------------------------THPSGDLYRRYLV 211
+PL +R T+ G D+ PS + R +L
Sbjct: 198 GLMEAGSPLPTRETVSGSDDNDGHSSKRDFLFKLETEEELERKQQQDNDPSLQMLRNFLQ 257
Query: 212 SD-----------KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
D K LLR + DIV + CFTK Y HY EG
Sbjct: 258 GDGEDLSQYLLPPKSLLRYALLLDIVTPSCRRSTCFTKGYGHYIEG 303
>gi|111185513|gb|AAH46854.2| MGC53207 protein [Xenopus laevis]
Length = 382
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 140/278 (50%), Gaps = 57/278 (20%)
Query: 20 NTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADAR 79
NT+AN VYK+NFP T L + I+ +++E++A+S D+ILMSPPCQPFTR GLQ DI+D R
Sbjct: 21 NTNANKVYKYNFPHTPLWPKTIEGITLKELDALSFDMILMSPPCQPFTRIGLQGDISDPR 80
Query: 80 CTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 138
+ Y+++ +P + L +LLENVKGFE S +R+ + L + G+ +QEFLLSPT G
Sbjct: 81 AKSFLYVLDILPRLKKLPAYILLENVKGFESSEAREALIGTLQKCGYVYQEFLLSPTCLG 140
Query: 139 VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL--------------------PKL 178
+PNSR RY+LIAK F F S+ ++ E P+
Sbjct: 141 IPNSRLRYFLIAKL------QTEPFAFPISNTILEEFPSQHSIDPGRRRVIHCSENNPQA 194
Query: 179 KANTCNPLLS-RMTLHG----ILDSTHPSGDLYRR------------------------- 208
A+ NP T HG L + +L R+
Sbjct: 195 GADQKNPSCPFSGTDHGPEKTFLYKLETAQELERKQGQDNDASVRMLQDFLETSVEEMSQ 254
Query: 209 YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
Y + K LLR + DIV + CFTK Y HY EG
Sbjct: 255 YFLPPKSLLRYALILDIVRPTCRRSTCFTKGYGHYVEG 292
>gi|351705087|gb|EHB08006.1| tRNA (cytosine-5-)-methyltransferase [Heterocephalus glaber]
Length = 400
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 62/291 (21%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYKHNFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 28 QVVAAIDVNTVANEVYKHNFPHTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTRIGL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D R + ++++ +P + L + +LLENVKGFE S +RDL+ + GF++QEF
Sbjct: 88 QGDMTDRRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIETIENCGFQYQEF 147
Query: 131 LLSPTQF---------GVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL--- 178
LLSP G+PNSR RY+LIAK F+ +++ + PK+
Sbjct: 148 LLSPPSVAALLPLQLNGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMDFPKIESE 201
Query: 179 -------------------------KANTC---NPLLSRMTLHGILDSTHP-----SGDL 205
K+ C + +L ++ +D H S +
Sbjct: 202 HPQKHAVDVENRSNIKKIEPITHFDKSPQCSGKDTILFKLETAEEIDRKHQQDSDVSVQM 261
Query: 206 YRRYLVSD----------KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +L D K LLR + DIV + CFTK Y Y EG
Sbjct: 262 LKDFLEDDIETDQYFLPPKSLLRYALLLDIVKPTCRRSVCFTKGYGSYIEG 312
>gi|144952808|gb|ABP04058.1| DNA methyltransferase 2 [Macrobrachium rosenbergii]
Length = 396
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 155/287 (54%), Gaps = 59/287 (20%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
++V + +INT+A VY+HNFP+T + NI +++ + ++SPDVI+MSPPCQPFT
Sbjct: 30 GLQFDIVGSYEINTTALEVYQHNFPKTP-KAYNIMGLTLDHLESLSPDVIMMSPPCQPFT 88
Query: 68 RTGLQKDIADARCTALSYLI---ETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAG 124
R GL++D+ D R ++L +LI E + P + +LLENV GFE S +R+ + ML
Sbjct: 89 RQGLKRDVEDTRTSSLLHLISLLEKLSHPPKM--ILLENVAGFEKSLAREQLMEMLRSKN 146
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP-------- 176
+ +QEFLLSPT+FG+PNSR RYYL+AK+ FC + S+E+ EL
Sbjct: 147 YVWQEFLLSPTEFGIPNSRLRYYLLAKQQLYP------FCLDVSNEIKEELTACLCIRRE 200
Query: 177 ------------KLKANTCNPLLSRMTLHGILDSTHP--SGDLYR--------------- 207
++ AN P+++ +L +L H + +L++
Sbjct: 201 RDIQAPVLPDAREICANCGKPVIN--SLQNLLRDFHGNINNELHQPRKSYSDLSLSLSSF 258
Query: 208 --------RYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ DK L + + DIV+ ++ + CFTK Y HY EG
Sbjct: 259 MESDINVEPYLLKDKVLSKYCMILDIVDRESKRSCCFTKGYGHYVEG 305
>gi|281212492|gb|EFA86652.1| DNA cytosine-5--methyltransferase [Polysphondylium pallidum PN500]
Length = 420
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 142/254 (55%), Gaps = 21/254 (8%)
Query: 11 LEVVTAIDINTSANSVYKHN----FP---RTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
EV+ + DINT+AN VY +N +P + + ++I + + +E+ + + LMSPPC
Sbjct: 60 FEVLQSFDINTNANDVYNYNISSKYPNPKKHKVNSKSIDALTTKELESFRANTWLMSPPC 119
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTR 122
QPFTR GLQKD+ D R + +L+E + A+ +L+ENV GFE S +RDL+ +
Sbjct: 120 QPFTRVGLQKDLQDNRTNSFVHLLEQLAALAEPPTYILIENVYGFEKSNARDLLLETFNQ 179
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKR----------SPAAHSSEASFCFETSSELM 172
++FQEF L+PTQFG+PN R RY+ IAK+ S + + + ++ ++
Sbjct: 180 LQYQFQEFHLTPTQFGLPNQRLRYFCIAKKVLLNNDSNNNSNSNIDIKTKIVTKDNAIIL 239
Query: 173 TELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+P + N T+ LD ++ + + Y +Y + +K LL + +FDI +
Sbjct: 240 KTIPSYQHTENN---ETNTIEQYLDESYNTDEHYYKYKIPEKLLLSKGMLFDIKTINDKT 296
Query: 233 TNCFTKAYTHYAEG 246
TNCFTKAY+ + EG
Sbjct: 297 TNCFTKAYSKFVEG 310
>gi|355725970|gb|AES08721.1| tRNA aspartic acid methyltransferase 1 [Mustela putorius furo]
Length = 366
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 135/281 (48%), Gaps = 75/281 (26%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR L
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTR--L 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QK +P + +LLENVKGFE S +RDL+ L GF++QEFL
Sbjct: 86 QK-------------------LP--KYILLENVKGFEVSSTRDLLIQTLENCGFQYQEFL 124
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA----------- 180
LSPT G+PNSR RY+LIAK F+ +++TE PK+++
Sbjct: 125 LSPTSLGIPNSRLRYFLIAKLQ------SEPLPFQAPGQVLTEFPKIESEHPERNRIEAE 178
Query: 181 ----------NTCNP-----------LLSRMTLHGILDSTHPSGDL-------------- 205
N C+ L TL I H DL
Sbjct: 179 NKMERKKIEPNICSDKSRPCSGKETILFKLETLEEIDRKHHQDSDLSVQMLKDFLEDDVD 238
Query: 206 YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR +FDIV + CFTK Y Y EG
Sbjct: 239 MNQYFLPPKSLLRYALLFDIVKPTCRRSTCFTKGYGSYIEG 279
>gi|295646363|gb|ADG23067.1| DNA (cytosine-5)-methyltransferase 2 [Gadus morhua]
Length = 139
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDI 75
AID+NT+AN +Y+HNFP T L + I+ S+EE N +S D+ILMSPPCQPFTR GLQ D
Sbjct: 2 AIDVNTTANEIYRHNFPDTPLWPKTIEGISLEEFNKLSFDMILMSPPCQPFTRIGLQGDT 61
Query: 76 ADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSP 134
+D R + Y+++ +P + L + +LLENVKGFE S +RD + + L G+ FQE L+SP
Sbjct: 62 SDPRTKSFLYILDLLPRLAVLPRFILLENVKGFETSSARDSLLNTLRDCGYTFQEILVSP 121
Query: 135 TQFGVPNSRTRYYLIAK 151
T G+PNSR RY+LIAK
Sbjct: 122 TSLGIPNSRLRYFLIAK 138
>gi|195443002|ref|XP_002069228.1| GK21086 [Drosophila willistoni]
gi|194165313|gb|EDW80214.1| GK21086 [Drosophila willistoni]
Length = 221
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 133/215 (61%), Gaps = 17/215 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTN-LRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
EVV A+D+NT AN VY HN+ L+ RNIQS S +E+N ++ +++LMSPPCQP TR G
Sbjct: 13 EVVAAMDVNTVANKVYAHNYKNPKYLKTRNIQSLSEKEVNKLNANMLLMSPPCQPHTRQG 72
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
LQ+D D R +AL+ L +P +++ +L+ENVKGFE S++R L +A F ++EF
Sbjct: 73 LQRDTEDKRSSALNQLCSLLPKCETIKYILMENVKGFECSQARQQFIEALQQAKFYWREF 132
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+L+PTQF VPN+R RYY +A++ + F F S ++ ++P + N +
Sbjct: 133 ILTPTQFQVPNTRYRYYCLARK-------DKDFDF-PSGKIWEQMPGQAPHPTNEM---D 181
Query: 191 TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDI 225
T+ +L+ + + + +LV D D+L+R V DI
Sbjct: 182 TISSLLEPSISTSE----FLVPD-DVLKRVLVMDI 211
>gi|158284395|ref|XP_306830.2| Anopheles gambiae str. PEST AGAP012836-PA [Anopheles gambiae str.
PEST]
gi|157021124|gb|EAA45924.2| AGAP012836-PA [Anopheles gambiae str. PEST]
Length = 238
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 124/222 (55%), Gaps = 16/222 (7%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L E+V+AID+N AN VYKHNF +R NI S + E++ + D ILMSPPC
Sbjct: 31 LEQAGKEFEIVSAIDVNPIANEVYKHNFGAKTVRNGNILSLTAEKVTKLKVDTILMSPPC 90
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QPFTR G DI D R ++ E + +P ++ +L+ENVKGFE S++ ++ + L A
Sbjct: 91 QPFTRNGKFNDINDRRSDPFLHICELLDKMPLVKFILMENVKGFENSQACEMYKARLREA 150
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTC 183
GF +Q+++LSP QFGVPN+R RYY IAKR A F+ SE + P+ + C
Sbjct: 151 GFHYQQYILSPHQFGVPNTRHRYYCIAKRHGAD--------FKWKSEDIITTPQ---SGC 199
Query: 184 NPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDI 225
++ TL G + T D +Y + LL+ + D+
Sbjct: 200 G---AKQTLVGTIVDTQQ--DALEQYGLKSATLLKHLPLMDV 236
>gi|344277973|ref|XP_003410771.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine(38)-C(5))-methyltransferase-like [Loxodonta
africana]
Length = 441
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 143/282 (50%), Gaps = 53/282 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A+D+NT AN VYK+NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR GL
Sbjct: 79 QVVAAVDVNTVANEVYKYNFPHTLLLAKAIEGITLEEFDRLSFNMILMSPPCQPFTRIGL 138
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D AD R ++ Y+++ +P + L + +LLENVKGFE S +RD++ + GF+ QEF
Sbjct: 139 QGDKADPRTSSFLYILDILPRLKKLPKYILLENVKGFEVSSTRDMLIQTIENCGFQHQEF 198
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA---------- 180
LLSP G R R+ L++K S ++ + F T +++ E PK+ +
Sbjct: 199 LLSPNSVGTIYLRFRHRLLSKES-----FDSLYIF-TXFQILLEFPKIGSENPQKHAIDA 252
Query: 181 -----------NTC----------NPLLSRMTLHGILDSTHP-SGDL------------- 205
N C +L ++ +D H + DL
Sbjct: 253 EKKTEEKKIEPNICLDGSTQCSGKETILFKLETAKEIDRKHQQNSDLSVQMLKDFLEHDI 312
Query: 206 -YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y +S K L R + DIV + CFTK Y + EG
Sbjct: 313 DINQYFLSPKLLQRYAFILDIVKPTCRRSTCFTKGYGRFIEG 354
>gi|119606624|gb|EAW86218.1| hCG23994, isoform CRA_b [Homo sapiens]
gi|167887560|gb|ACA05984.1| tRNA aspartic acid methyltransferase 1 variant 2 [Homo sapiens]
Length = 367
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 138/281 (49%), Gaps = 75/281 (26%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR L
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR--L 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QK +P + +LLENVKGFE S +RDL+ + GF++QEFL
Sbjct: 86 QK----------------LP-----KYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFL 124
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NTC 183
LSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 125 LSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVE 178
Query: 184 NPLLSR-----MTLHG---------ILDSTHPSGDLYRR--------------------- 208
N + + ++ G IL + +++R+
Sbjct: 179 NKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTD 238
Query: 209 ---YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 239 VNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 279
>gi|302789792|ref|XP_002976664.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
gi|300155702|gb|EFJ22333.1| hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii]
Length = 334
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 127/255 (49%), Gaps = 36/255 (14%)
Query: 9 FSLE-------VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
FSLE VV A +IN AN VY+ NF +G NIQ S+ +++ D L+SP
Sbjct: 22 FSLEEAKIDATVVEAFEINELANDVYERNFGHRPNQG-NIQRLSVSDLDKYEADAWLLSP 80
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPA--IPSLQCLLLENVKGFEGSRSRDLITSM 119
PCQP+TR GLQKD ADAR ++ L++TI + IP + +ENV GFE S +R + +
Sbjct: 81 PCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPAH-VFIENVVGFETSHTRSQLIKV 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS--------EASFCFETSSEL 171
L GFR QE +++P QFG+P SR RY+ +AKR P S F F T+ +
Sbjct: 140 LEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFSRSDLNGQLVSCPFDFSTNRDF 199
Query: 172 MTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKAS 231
E + NP D Y+V + R +DIV +
Sbjct: 200 HVETKTVGEYLENP-----------------SDCMEDYMVPSTTIARWGEAYDIVTPDSG 242
Query: 232 STNCFTKAYTHYAEG 246
CFTK+Y YA+G
Sbjct: 243 RCCCFTKSYARYAKG 257
>gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
Length = 267
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +VV A+DINT+AN VYK NFP+T L G+NIQS +E+ N + D+ILMSPPC
Sbjct: 17 LKESGIDYKVVKAVDINTTANEVYKLNFPKTLLLGKNIQSLQLEDFNGI--DMILMSPPC 74
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QP TR GL++D D R +L YL+ +P + S+ +LLENVKGFE SR RD + +L +
Sbjct: 75 QPHTRNGLKRDNLDERSHSLLYLLTLLPKLHSVNYILLENVKGFEISRIRDELVDILISS 134
Query: 124 GFRFQEFLLSPTQFGVPNSR 143
G+ +QEFLL+PTQFG+PNSR
Sbjct: 135 GYTYQEFLLTPTQFGIPNSR 154
>gi|330802352|ref|XP_003289182.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
gi|325080758|gb|EGC34300.1| hypothetical protein DICPUDRAFT_153508 [Dictyostelium purpureum]
Length = 378
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 137/274 (50%), Gaps = 38/274 (13%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L EVV + DINT+A YK+ F N +NI+S ++EEI+ + LMSPPC
Sbjct: 34 LKESGVKFEVVQSFDINTNAILNYKYTF-NENTSQKNIESLTVEEIDNFKSNAWLMSPPC 92
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPS-LQCLLLENVKGFEGSRSRDLITSMLTR 122
QPFTR+GLQKD D R + +L++ I + S + +L+ENV GFE S +R + +L +
Sbjct: 93 QPFTRSGLQKDDLDNRTNSFFHLLDVIGKLKSPPKYILIENVFGFEKSNTRTELVKVLKQ 152
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCF----------------- 165
+ FQEF L+P QF +PN R RY+ IAK + + E
Sbjct: 153 LHYSFQEFHLTPQQFDLPNQRLRYFCIAKLNSIFNFQEIEETIIDKKDENVNNINNENNE 212
Query: 166 ----------ETSSELMTELPKLKANT---CNPLLSRMTLHGILDSTHPSGDLYRRYLVS 212
+++ +P +T C P L LD+ ++Y+++ V
Sbjct: 213 NNNNNDNNDNNDKYKILNYIPGYNHSTLEDCEP------LSNYLDTDKTDDEIYQQHKVP 266
Query: 213 DKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+K LL + +FDI ++ + NCFTK+Y + EG
Sbjct: 267 EKLLLSKGMLFDIKQKESKTCNCFTKSYGKFVEG 300
>gi|291402254|ref|XP_002717405.1| PREDICTED: tRNA aspartic acid methyltransferase 1 [Oryctolagus
cuniculus]
Length = 367
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 130/281 (46%), Gaps = 75/281 (26%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VY++NFP T L + I+ ++EE + +S ++ILMSPPCQPFTR L
Sbjct: 28 QVVAAIDVNTVANEVYEYNFPHTLLLAKTIEGITLEEFDKLSFNMILMSPPCQPFTR--L 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QK +P +LLENVKGFE S +RDL+ + GF++QEFL
Sbjct: 86 QK-------------------LPKY--ILLENVKGFEVSSTRDLLIQTMENCGFQYQEFL 124
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA----------- 180
LSPT G+PN+R RY+L+AKR F+ +++ E PK+++
Sbjct: 125 LSPTSLGIPNARLRYFLVAKR------QSEPLPFQAPGQVLMEFPKIQSEYPQKYAIDTK 178
Query: 181 ----------NTC-----------NPLLSRMTLHGILDSTHPSGDL-------------- 205
N C L T I D+
Sbjct: 179 QKSEEKEIQPNICFDGSTQCSGKDTVLFKLETAEEIERKRQQDNDISVQMLKDFLEDDID 238
Query: 206 YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y + K LLR + DIV + CFTK Y Y EG
Sbjct: 239 MNQYFLPPKSLLRYALLLDIVRPTCRRSTCFTKGYGSYIEG 279
>gi|395539996|ref|XP_003771948.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Sarcophilus
harrisii]
Length = 305
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
+ L + + S EVV AID+NT AN VYKHNFP T L + I+ +++E N +S ++ILMSP
Sbjct: 65 QALKDSSVSAEVVAAIDVNTIANEVYKHNFPHTQLWAKTIEGITLQEFNQLSFNMILMSP 124
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSML 120
PCQPFTR GLQ D+ D R + +++ +P + L + +LLENVKGFE S +RDL L
Sbjct: 125 PCQPFTRIGLQGDVTDPRTKSFLHILRILPRLQKLPKYILLENVKGFEVSSARDLFVQTL 184
Query: 121 TRAGFRFQEFLLSPT 135
GF++QEFLLSPT
Sbjct: 185 ENCGFKYQEFLLSPT 199
>gi|168036438|ref|XP_001770714.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678075|gb|EDQ64538.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 129/255 (50%), Gaps = 29/255 (11%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A DIN AN VY+HNF + RNIQ ++ +++A D +MSPPCQP+TR GL+
Sbjct: 33 VVEAFDINEVANDVYEHNFGHRPSQ-RNIQRLTVSQLDAYKADTWIMSPPCQPYTRQGLR 91
Query: 73 KDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
KD DAR + ++E +P + P+ +L+ENV GFE S + + M GF QE
Sbjct: 92 KDAGDARAFSFLQMLEMLPQMKFPPNY--ILVENVVGFEDSITHGHLIDMFEDLGFMTQE 149
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE---LPKLKANT---- 182
F+LSP Q G+P SR RY+ +AK+ P + A ++ L+ E LP LK N
Sbjct: 150 FILSPLQLGIPYSRPRYFCLAKKKPKSFVQPA-----YNNSLLCELGPLPLLKMNEPIID 204
Query: 183 ----CNPLLSRMTLH-------GILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKAS 231
C P+ M G + D + Y + L R FD+V +
Sbjct: 205 PGVYCRPVSDFMEEEPCTSDNLGKCFDMNMCADKWELYKLPSSVLERWGDCFDMVTKDSK 264
Query: 232 STNCFTKAYTHYAEG 246
CFTK+Y YA+G
Sbjct: 265 RCCCFTKSYGSYAKG 279
>gi|449662352|ref|XP_002166687.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Hydra
magnipapillata]
Length = 388
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 137/281 (48%), Gaps = 45/281 (16%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ S+ V A +INTSANSVY+HNFP+T L +NI+ ++E++ + DV MSPPC
Sbjct: 21 LTYAGVSVHVEAAFEINTSANSVYRHNFPQTTLLQKNIEGLNLEDLEHFNADVWTMSPPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSML 120
QP+TR G Q+ D R + L+ + + PS + LENVKGFE S S + +L
Sbjct: 81 QPYTRLGKQEASCDPRAKSFKKLMNILMKMTSPPSF--IFLENVKGFEVSDSCEDFLMIL 138
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK----------RSPAAHSSEASFC----FE 166
G+ Q FLLSP FG+PNSR RYYLIA+ + P + C E
Sbjct: 139 NSKGYYTQSFLLSPIDFGIPNSRLRYYLIARYQKKFNFKTTQKPICLNGNLCECEGLDME 198
Query: 167 TSSELMTELPKL---------------------KANTCNPLLSRMTLHGILDSTHPSGDL 205
+ + + +L ++ C P L +M LD
Sbjct: 199 CACTALASVVQLYKPMKIKDILNVDNSVSSEINSSSFCEPDLKKM-----LDLLQKRSFP 253
Query: 206 YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +S LLR + +FDIV+ ++ + CFT Y+ + EG
Sbjct: 254 IKFTKISHSILLRYYSLFDIVDSDSNKSCCFTSGYSRFIEG 294
>gi|302782830|ref|XP_002973188.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
gi|300158941|gb|EFJ25562.1| hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii]
Length = 334
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 127/247 (51%), Gaps = 20/247 (8%)
Query: 9 FSLE-------VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
FSLE VV +IN AN VY+ NF +G NIQ S+ +++ D L+SP
Sbjct: 18 FSLEEAKIDAMVVEVFEINELANDVYERNFGHRPNQG-NIQRLSVSDLDKYEADAWLLSP 76
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPA--IPSLQCLLLENVKGFEGSRSRDLITSM 119
PCQP+TR GLQKD ADAR ++ L++TI + IP + +ENV GFE S +R + +
Sbjct: 77 PCQPYTRQGLQKDSADARASSFLKLLDTISSLSIPPTH-VFIENVVGFETSHTRSQLIKV 135
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
L GFR QE +++P QFG+P SR RY+ +AKR P S S+L +L
Sbjct: 136 LEDTGFRIQECIINPLQFGIPYSRPRYFCLAKREPFQFS---------RSDLNGQLVSCP 186
Query: 180 ANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKA 239
+ + + + + D Y+V + R +DIV + CFTK+
Sbjct: 187 FDFSTNRDFHVETKTVGEYLENASDCTEDYMVPSTTIARWGEAYDIVTPDSGRCCCFTKS 246
Query: 240 YTHYAEG 246
Y YA+G
Sbjct: 247 YARYAKG 253
>gi|297812763|ref|XP_002874265.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
gi|297320102|gb|EFH50524.1| DNA methyltransferase-2 [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 134/270 (49%), Gaps = 36/270 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A +IN SAN VY+HNF +G NIQS + +++ + D L+SPPCQP+TR GL
Sbjct: 39 EVVEAFEINDSANDVYQHNFKHRPYQG-NIQSLTAVDLDKYNADAWLLSPPCQPYTRQGL 97
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR + ++E IP Q L +ENV GFE S + + LT+ + QEF
Sbjct: 98 QKQSGDARAFSFLRILELIPHTSKPPQILFVENVVGFETSDTHMEMIDTLTKLNYVTQEF 157
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEAS--FCFETSSEL-----MTELPKLKANT- 182
+LSP QFGVP SR RY+ +AKR P S+ S + S L E+ K +A
Sbjct: 158 ILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSNNKLLWSPSPLYGCDDQVEVGKCQAEEG 217
Query: 183 -------CNP----LLSRMTLHG----ILDSTHPSGDLY-----------RRYLVSDKDL 216
C P L S + G + DS + S D Y +YLV +
Sbjct: 218 LDKLLQFCEPVEKFLESAAHVDGEPSSVDDSENGSKDCYGQEDDSVPDSVHQYLVPVSLI 277
Query: 217 LRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
R + DIV + CFTK+Y Y +G
Sbjct: 278 ERWGNAMDIVYPDSKRCCCFTKSYYRYVKG 307
>gi|345309099|ref|XP_001520279.2| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 125/259 (48%), Gaps = 62/259 (23%)
Query: 43 SFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLL 101
S++E + +S DV+LMSPPCQPFTRTGL+ D AD R + YL+ +P + + +LL
Sbjct: 1 GISLQEFDRLSFDVMLMSPPCQPFTRTGLRGDAADGRTNSFLYLLRILPRLRKPPRYILL 60
Query: 102 ENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA 161
ENVKGFEGS +RDL+ + + GF++QEFLLSPT G+PNSR RY+LIAK +
Sbjct: 61 ENVKGFEGSATRDLLVQTIEKCGFQYQEFLLSPTSLGIPNSRLRYFLIAK------LQSS 114
Query: 162 SFCFETSSELMTELPKLKANTCNPLL--------SRMTLHGILDSTHP------------ 201
F F+ +++TE P+ + +P R G ++T P
Sbjct: 115 PFPFQVRGQILTEFPEPGSGN-SPRREVAVAGGSERAAEPGKEENTEPRCRSADGTPRPG 173
Query: 202 --------------------SGDL----YRRYLVSD----------KDLLRRFHVFDIVN 227
GDL R +L D K LLR + D+V
Sbjct: 174 REAVLFKLETAEEMQRKRQRDGDLSVEMLRGFLEEDSGPSRYFLPPKPLLRYGLLLDVVK 233
Query: 228 GKASSTNCFTKAYTHYAEG 246
+ CFTK Y Y EG
Sbjct: 234 PTCRRSTCFTKGYGSYVEG 252
>gi|167515786|ref|XP_001742234.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778858|gb|EDQ92472.1| predicted protein [Monosiga brevicollis MX1]
Length = 356
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 136/279 (48%), Gaps = 66/279 (23%)
Query: 26 VYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSY 85
VY+ N P T ++ RNIQ+ I ++ ++ D+ LMSPPCQP++R G Q+ + DAR + Y
Sbjct: 1 VYQANHPDTLIKNRNIQAVPIRQLEKLAADLWLMSPPCQPYSRQGHQRGLEDARSDSFRY 60
Query: 86 LIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNS 142
L++ + + PS+ +L+ENV GFE S+ R+ + + L +RFQEF LSP QFGVPNS
Sbjct: 61 LLDALTQMKNPPSV--ILVENVVGFESSQGREELVATLNTLQYRFQEFWLSPDQFGVPNS 118
Query: 143 RTRYYLIAKRS------PAAHSSEASFCFETSSELMTELP-------------------- 176
R RY+L+A R P+A +++A+ F SS LM LP
Sbjct: 119 RLRYFLLAIRGDRFRAEPSATAADAA--FGNSSTLMYHLPGALQFEPGLPTSEFGTFDDA 176
Query: 177 -----------------------------KLKANTCNPLLSRMTLHGILDSTHPSGDLYR 207
K K N L S GIL STH L R
Sbjct: 177 YRVAVEQSQVSDYSYPQQVCIAEACAIGSKKKKNNAGCLTSHPPRMGILSSTH----LAR 232
Query: 208 RYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
S + LLR + DIV + + CFTK Y+H EG
Sbjct: 233 HLPGSGRLLLRWGRLLDIVRPEERRSLCFTKGYSHKVEG 271
>gi|21553420|gb|AAM62513.1| DNA methyltransferase PMT1-like protein [Arabidopsis thaliana]
Length = 383
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 133/276 (48%), Gaps = 48/276 (17%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A +IN SAN VY+HNF +G NIQS + +++ + D L+SPPCQP+TR GL
Sbjct: 39 EVVEAFEINDSANDVYQHNFKHRPYQG-NIQSLTAADLDKYNADAWLLSPPCQPYTRQGL 97
Query: 72 QKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR ++ ++E IP Q L +ENV GFE S + + LT+ + QEF
Sbjct: 98 QKHSGDARASSFLRILELIPHTTKPPQMLFVENVVGFETSDTHMEMIGTLTKLDYVTQEF 157
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELM------------TELPKL 178
+LSP QFGVP SR RY+ +AKR P S+ S +++L+ E K
Sbjct: 158 ILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHS-----NNKLLWSPDPLYGRDDQVEFGKC 212
Query: 179 KANT--------CNPLLSRMTLHGILDSTHPSG--------------------DLYRRYL 210
+A C P+ + L +D PS D +YL
Sbjct: 213 QAEEGLDKLLEFCEPVEKFLELAAHVDG-EPSSVDDSENGSKDCCGQEGDSVPDSVHQYL 271
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V + R + DIV + CFTK+Y Y +G
Sbjct: 272 VPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKG 307
>gi|14573295|gb|AAK68034.1| DNA methyltransferase 2b [Homo sapiens]
Length = 137
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 23/140 (16%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR L
Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR--L 67
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
QK +P + +LLENVKGFE S +RDL+ + GF++QEFL
Sbjct: 68 QK----------------LP-----KYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFL 106
Query: 132 LSPTQFGVPNSRTRYYLIAK 151
LSPT G+PNSR RY+LIAK
Sbjct: 107 LSPTSLGIPNSRLRYFLIAK 126
>gi|18420929|ref|NP_568474.1| DNA methyltransferase-2 [Arabidopsis thaliana]
gi|332006070|gb|AED93453.1| DNA methyltransferase-2 [Arabidopsis thaliana]
Length = 383
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 132/276 (47%), Gaps = 48/276 (17%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A +IN SAN VY+HNF +G NIQS + +++ + D L+SPPCQP+TR GL
Sbjct: 39 EVVEAFEINDSANDVYQHNFKHRPYQG-NIQSLTAADLDKYNADAWLLSPPCQPYTRQGL 97
Query: 72 QKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR + ++E IP Q L +ENV GFE S + + LT+ + QEF
Sbjct: 98 QKHSGDARAFSFLRILELIPHTTKPPQMLFVENVVGFETSDTHMEMIGTLTKLDYVTQEF 157
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELM------------TELPKL 178
+LSP QFGVP SR RY+ +AKR P S+ S +++L+ E K
Sbjct: 158 ILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHS-----NNKLLWSPDPLYGRDDQVEFGKC 212
Query: 179 KANT--------CNPLLSRMTLHGILDSTHPSG--------------------DLYRRYL 210
+A C P+ + L +D PS D +YL
Sbjct: 213 QAEEGLDKLLEFCKPVEKFLELAAHVDG-EPSSVDDSENGSKDCCGQEGDSVPDSVHQYL 271
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V + R + DIV + CFTK+Y Y +G
Sbjct: 272 VPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKG 307
>gi|384497196|gb|EIE87687.1| hypothetical protein RO3G_12398 [Rhizopus delemar RA 99-880]
Length = 285
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 21/199 (10%)
Query: 59 MSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLIT 117
MSPPCQP+TR GLQ+ DAR + +L++ + + + + LL+ENVKGFE S SR+++
Sbjct: 1 MSPPCQPYTRLGLQQGSEDARAKSFLHLLKVLKEMKNKPKYLLVENVKGFEESDSREMLV 60
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEAS---FCFETSSELMTE 174
++L + + FQEFLL+P Q G+PNSR RYYL+AK P+ + + + SE M+E
Sbjct: 61 NVLQESNYSFQEFLLTPLQLGIPNSRMRYYLLAKLKPSEFAVPVTNNIIKYIPLSEKMSE 120
Query: 175 L-------PKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVN 227
++ N P+ + + DS YL++DK L++ VFDIV
Sbjct: 121 AFIDNRGEEQVDENVVEPISNYLESDIDEDS----------YLLTDKTLVKNVQVFDIVK 170
Query: 228 GKASSTNCFTKAYTHYAEG 246
+ + CFTK Y HYA+G
Sbjct: 171 KSSRRSCCFTKGYYHYAQG 189
>gi|256078707|ref|XP_002575636.1| DNA (cytosine-5)-methyltransferase [Schistosoma mansoni]
gi|339776689|gb|AEK05284.1| DNA-methyltransferase 2 isoform 1 [Schistosoma mansoni]
Length = 368
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 21/254 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A++IN A VYK+NFP T R I+SFS + + +++ +V + PPCQPFTR G
Sbjct: 25 EVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDYVCSLNANVWSLCPPCQPFTRLGK 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+ AD R ++ ++++ I +I ++LENVKGFE S + +L + +++FL
Sbjct: 85 RMCEADNRSSSFFHVLDLI-SILKPAGIILENVKGFEHSEPWRRLIEVLNSCDYEYRQFL 143
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL-----MTELPKLKANTCNPL 186
LSP QFG+PN R R+YL+A+ ++ +S S +L LP + +C+ +
Sbjct: 144 LSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDLRPPIDAPMLPGCQCTSCSGV 203
Query: 187 LSRMTLHGILDSTH--------------PSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+S + H + T PS Y + +K L R F V DIV
Sbjct: 204 ISHIE-HTDDNFTEYIQFCRPISEFLLVPSDSSKELYFLDEKCLQRYFRVLDIVRSCDKK 262
Query: 233 TNCFTKAYTHYAEG 246
T CFTK Y+ EG
Sbjct: 263 TRCFTKGYSKRLEG 276
>gi|353231993|emb|CCD79348.1| putative dna (cytosine-5)-methyltransferase [Schistosoma mansoni]
Length = 293
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 21/254 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A++IN A VYK+NFP T R I+SFS + + +++ +V + PPCQPFTR G
Sbjct: 25 EVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDYVCSLNANVWSLCPPCQPFTRLGK 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+ AD R ++ ++++ I +I ++LENVKGFE S + +L + +++FL
Sbjct: 85 RMCEADNRSSSFFHVLDLI-SILKPAGIILENVKGFEHSEPWRRLIEVLNSCDYEYRQFL 143
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL-----MTELPKLKANTCNPL 186
LSP QFG+PN R R+YL+A+ ++ +S S +L LP + +C+ +
Sbjct: 144 LSPLQFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDLRPPIDAPMLPGCQCTSCSGV 203
Query: 187 LSRMTLHGILDSTH--------------PSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+S + H + T PS Y + +K L R F V DIV
Sbjct: 204 ISHIE-HTDDNFTEYIQFCRPISEFLLVPSDSSKELYFLDEKCLQRYFRVLDIVRSCDKK 262
Query: 233 TNCFTKAYTHYAEG 246
T CFTK Y+ EG
Sbjct: 263 TRCFTKGYSKRLEG 276
>gi|363814463|ref|NP_001242866.1| uncharacterized protein LOC100792567 [Glycine max]
gi|255640237|gb|ACU20409.1| unknown [Glycine max]
Length = 385
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 55/282 (19%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A +IN +AN VY+HNF +G NIQ + +++ D L+SPPCQP+TR GL
Sbjct: 36 QVVQAFEINDTANDVYQHNFGHRPYQG-NIQCLTAADLDKYGADAWLLSPPCQPYTRQGL 94
Query: 72 QKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
QKD DAR + ++E +P + PS+ L +ENV GFE S + + +L + F Q
Sbjct: 95 QKDTGDARAFSFLQILELMPFLLRPPSM--LFVENVVGFETSDTYAKLIEILEKTNFITQ 152
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL---------- 178
EF+L+P QFG+P SR RY+ +AKR P++ +E +S+L+ P L
Sbjct: 153 EFILTPLQFGIPYSRPRYFCLAKRKPSSFVNEC-----LNSQLIQSPPPLFEHFDTAADE 207
Query: 179 ----KANTCNPLLSRMTLHGILDSTHPSGDL----------------------------- 205
K + N L S + L+ +PS D+
Sbjct: 208 DDSSKEDRQNLLQSCQPIENFLELKNPSSDIAVESVALRTDLSNDAPRTLGKNNGHDEYE 267
Query: 206 -YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+Y V + R D+V + CFTK+Y Y +G
Sbjct: 268 SLDQYFVHPSLIERWGSAMDVVYPDSKRCCCFTKSYYRYVKG 309
>gi|426364086|ref|XP_004049153.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Gorilla
gorilla gorilla]
Length = 374
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 133/282 (47%), Gaps = 70/282 (24%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFTR G
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPNTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGR 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
Q D+ D+R + Y+++ +P + L + +LLENVKGFE S + T+ L
Sbjct: 88 QGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTSIDFTNNL---------- 137
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NT 182
G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 138 -------GIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDV 184
Query: 183 CNPLLSR-----MTLHGILDSTHPSGDLYR------------------------------ 207
N + + ++ G + + L++
Sbjct: 185 ENKIQEKNIEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDT 244
Query: 208 ---RYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 245 DMNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 286
>gi|388521015|gb|AFK48569.1| unknown [Lotus japonicus]
Length = 230
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 6/152 (3%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A +IN +AN VY+HNF +G NIQ + +++ D L+SPPCQP+TR GL
Sbjct: 29 EVVEAFEINDTANDVYQHNFAHRPYQG-NIQCLTAADLDKYGTDAWLLSPPCQPYTRQGL 87
Query: 72 QKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
QKD DAR + ++E +P++ PS+ L +ENV GFE S + + +L + F Q
Sbjct: 88 QKDTGDARAFSFLQILELMPSLSRPPSM--LFVENVVGFETSDTHAKLIEILEKTNFVTQ 145
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE 160
EF+LSP QFG+P SR RY+ +AKR P++ +E
Sbjct: 146 EFILSPLQFGIPYSRPRYFCLAKRKPSSFVNE 177
>gi|194706928|gb|ACF87548.1| unknown [Zea mays]
gi|413950581|gb|AFW83230.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
gi|413950582|gb|AFW83231.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 334
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 126/253 (49%), Gaps = 25/253 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 8 EVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPCQPYTRQGL 66
Query: 72 QKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
QK ADAR A S+ L++ + P Q L +ENV GFE S + D + +L+ F
Sbjct: 67 QKHSADAR--AFSFIKILNLMQDMSYPP--QMLFVENVVGFEVSDTHDQLLEVLSSLNFN 122
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPA--AHSSEASFCFETSSELMTELPKLKANT-- 182
QEF+LSP QFGVP SR RY+ +AKR P H+ + +T L L +
Sbjct: 123 TQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTPMCLSLTLSSTSQGSDH 182
Query: 183 ---------CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASST 233
C P+ + D P + + Y+V + R + DIV +
Sbjct: 183 QTEEELEPVCKPIKDFLVKEA--DGGTPDETVLQDYMVPVNLIERWGNAMDIVYPEFKRC 240
Query: 234 NCFTKAYTHYAEG 246
CFTK+Y Y +G
Sbjct: 241 CCFTKSYYRYVKG 253
>gi|413950580|gb|AFW83229.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 310
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 126/253 (49%), Gaps = 25/253 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 8 EVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPCQPYTRQGL 66
Query: 72 QKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
QK ADAR A S+ L++ + P Q L +ENV GFE S + D + +L+ F
Sbjct: 67 QKHSADAR--AFSFIKILNLMQDMSYPP--QMLFVENVVGFEVSDTHDQLLEVLSSLNFN 122
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPA--AHSSEASFCFETSSELMTELPKLKANT-- 182
QEF+LSP QFGVP SR RY+ +AKR P H+ + +T L L +
Sbjct: 123 TQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTPMCLSLTLSSTSQGSDH 182
Query: 183 ---------CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASST 233
C P+ + D P + + Y+V + R + DIV +
Sbjct: 183 QTEEELEPVCKPIKDFLVKEA--DGGTPDETVLQDYMVPVNLIERWGNAMDIVYPEFKRC 240
Query: 234 NCFTKAYTHYAEG 246
CFTK+Y Y +G
Sbjct: 241 CCFTKSYYRYVKG 253
>gi|66806465|ref|XP_636955.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
gi|74852778|sp|Q54JH6.1|CMT1_DICDI RecName: Full=DNA (cytosine-5)-methyltransferase
gi|60465358|gb|EAL63449.1| DNA -methyltransferase [Dictyostelium discoideum AX4]
Length = 379
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 28/268 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +V+ + DINT+AN YK+ F + + ++I+S+S+EE+ + LMSPPC
Sbjct: 20 LQESGVDFQVIQSFDINTNANLNYKYTFNEDSSQ-KSIESYSVEELEGFKANAWLMSPPC 78
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFE---GSRSRDLITSM 119
QPFTR GLQKD D R + +L++ + I +L+ENV GF S +RD +
Sbjct: 79 QPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVFGFAKKGSSNTRDHLLDT 138
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH-SSEASFCFETSSE-------- 170
L + + FQEF LSP QFG+ N R RY+ IAKR+ + E E E
Sbjct: 139 LIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQDKHNEKVDENKLNNNSN 198
Query: 171 ------------LMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLR 218
++ +P +T L + D +LY +Y V LL
Sbjct: 199 NNNEQNKYDNLKILDHIPGYDFHTT--LEECDEISNYFDKDLTDDELYEKYKVPHNLLLS 256
Query: 219 RFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ +FDI + ++NC TK+Y + EG
Sbjct: 257 KGMLFDIKQKDSKTSNCVTKSYGKFIEG 284
>gi|162461489|ref|NP_001105173.1| DNA methyl transferase4 [Zea mays]
gi|13936240|gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays]
gi|194697288|gb|ACF82728.1| unknown [Zea mays]
gi|413950584|gb|AFW83233.1| DNA methyltransferase ZMET4 isoform 1 [Zea mays]
gi|413950585|gb|AFW83234.1| DNA methyltransferase ZMET4 isoform 2 [Zea mays]
Length = 357
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 126/253 (49%), Gaps = 25/253 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 31 EVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPCQPYTRQGL 89
Query: 72 QKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
QK ADAR A S+ L++ + P Q L +ENV GFE S + D + +L+ F
Sbjct: 90 QKHSADAR--AFSFIKILNLMQDMSYPP--QMLFVENVVGFEVSDTHDQLLEVLSSLNFN 145
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPA--AHSSEASFCFETSSELMTELPKLKANT-- 182
QEF+LSP QFGVP SR RY+ +AKR P H+ + +T L L +
Sbjct: 146 TQEFILSPLQFGVPYSRPRYFCLAKREPVRFRHAFVNNKLLQTPMCLSLTLSSTSQGSDH 205
Query: 183 ---------CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASST 233
C P+ + D P + + Y+V + R + DIV +
Sbjct: 206 QTEEELEPVCKPIKDFLVKEA--DGGTPDETVLQDYMVPVNLIERWGNAMDIVYPEFKRC 263
Query: 234 NCFTKAYTHYAEG 246
CFTK+Y Y +G
Sbjct: 264 CCFTKSYYRYVKG 276
>gi|357445897|ref|XP_003593226.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
gi|355482274|gb|AES63477.1| tRNA (cytosine-5-)-methyltransferase [Medicago truncatula]
Length = 378
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 132/276 (47%), Gaps = 44/276 (15%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EV+ A +IN AN VY+HNF +G NIQ + +++ D L+SPPCQP+TR GL
Sbjct: 30 EVIEAFEINNIANDVYQHNFSHRPYQG-NIQCLTATDLDKYGADAWLLSPPCQPYTRQGL 88
Query: 72 QKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
QKD DAR + ++E IP + PS+ L +ENV GFE S + + +L + F Q
Sbjct: 89 QKDTGDARAFSFLQILELIPFLLQPPSM--LFVENVVGFETSDTHAKLIEILEKTNFITQ 146
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAA-----------HSSEASF-CFETS---SELMT 173
EF+LSP QFG+P SR RY+ +AKR P++ S F F T+ +L
Sbjct: 147 EFILSPLQFGIPYSRPRYFCLAKRKPSSFLNGCLNRQLIQSPRPLFEHFNTAPKEDDLSL 206
Query: 174 ELPKLKANTCNPLLSRMTLHG----------------ILDSTHPSG-------DLYRRYL 210
E + +C P+ + L D++ SG D +Y
Sbjct: 207 EDSQNLLQSCQPIEKFLVLKNPNSDTNVESAASTTSLSNDTSRTSGTDNDHEYDTLDKYY 266
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V L R D+V + CFTK+Y Y +G
Sbjct: 267 VHPSLLERWGSAMDVVYPDSKRCCCFTKSYYRYVKG 302
>gi|255548992|ref|XP_002515552.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223545496|gb|EEF47001.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 404
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 133/276 (48%), Gaps = 46/276 (16%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+V+ A DIN AN Y+HNF +G NIQS + ++++ + L+SPPCQP+TR GL
Sbjct: 37 KVMEAFDINNIANDAYEHNFGHRPYQG-NIQSLTAADLDSYAAHAWLLSPPCQPYTRQGL 95
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR + ++E IP L +ENV GFE S +R + +L +GF QEF
Sbjct: 96 QKHSGDARAFSFLKILELIPHTKQPPHMLFVENVVGFETSDTRTNMVEILANSGFVTQEF 155
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSP--------------------AAHSSEASFCFETSSE 170
+LSP QFG+P SR RY+ +AKR P + ++ S E
Sbjct: 156 ILSPLQFGIPYSRPRYFCLAKRKPLLFQHKYINHQLVWSLGPLFGHDEGTVADRYDQSPE 215
Query: 171 LMTELPKLKANTCNPLLSRMTL----HGI------LDSTHPSGDL----------YRRYL 210
+L +C P++S + +G+ + T+ SGDL +Y+
Sbjct: 216 SWDKL----LQSCEPVVSFLEFKNSSNGVDAETDFVAITNDSGDLENTGEGNLTTMDQYI 271
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V + R DIV ++ CFTK+Y Y +G
Sbjct: 272 VPSNLIERWGSAMDIVYPDSNRCCCFTKSYYRYVKG 307
>gi|156358701|ref|XP_001624654.1| predicted protein [Nematostella vectensis]
gi|156211447|gb|EDO32554.1| predicted protein [Nematostella vectensis]
Length = 226
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 116/239 (48%), Gaps = 51/239 (21%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A++I+T+AN+VY HNFP T + NI+ + + M ++MSPPCQP+T GL
Sbjct: 31 EVVAALEISTTANTVYGHNFPTTKIWNCNIEVCELCNVTTMPAIYMVMSPPCQPYTWVGL 90
Query: 72 QKDIADARCTALSYLIETIPAIPSLQ----CLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
Q D R ALS+L + + LQ L+ENVKGFE S +R I +
Sbjct: 91 QGASKDPR--ALSFL-HILSLLKRLQHPPKYWLIENVKGFETSDTRFYILLAFCNS---- 143
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLL 187
F++S QFG+PNSR RYYL+AKR P S+ F
Sbjct: 144 --FIVSSPQFGIPNSRLRYYLLAKRHPLTFSTAMGNKF---------------------- 179
Query: 188 SRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
Y ++L+ K L R V DIV K+ + CFTKAY HYAEG
Sbjct: 180 ----------------SYYEQFLLPTKVLSRFSLVLDIVTAKSRRSCCFTKAYGHYAEG 222
>gi|428178936|gb|EKX47809.1| hypothetical protein GUITHDRAFT_137189 [Guillardia theta CCMP2712]
Length = 380
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 129/244 (52%), Gaps = 19/244 (7%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
+E+V A +++ N VY NF ++ R+I+ +++ + D LMSPPCQP+T G
Sbjct: 38 VEIVAAFEVSDVCNLVYSSNFGENPIQ-RSIEHLDASYLDSFNADTWLMSPPCQPYTSMG 96
Query: 71 LQKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
QKD D R AL +L + + + P+ +LLENV F+ S S D L GF
Sbjct: 97 KQKDDQDPRARALLHLCQVVQDMQRPPNF--ILLENVNNFQHSNSHDRWLQALGSIGFMV 154
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLL 187
EFLLSPTQFG+PN R RYY +A+R ++S+ + +L+ +P + +
Sbjct: 155 HEFLLSPTQFGIPNERIRYYALARR-----IGKSSWNPDDIGKLLRYIPG-REDVVCAAE 208
Query: 188 SRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFH-----VFDIVNGKASSTNCFTKAYTH 242
+ LD + DL Y+V+D DL++ H VFDIV ++ +CFTK+Y+
Sbjct: 209 EVEEVAAYLDESSQV-DL-TPYMVADNDLMKWKHGLQGYVFDIVTPESRRCSCFTKSYSK 266
Query: 243 YAEG 246
Y G
Sbjct: 267 YIRG 270
>gi|255081819|ref|XP_002508128.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226523404|gb|ACO69386.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 404
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 14/246 (5%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A DIN + N VY+HNF +NI + + + + L+SPPCQPFTR G
Sbjct: 55 KVVAAFDINPNGNDVYEHNF-GVRPSQKNIYGLPVASFDRLDAGLWLLSPPCQPFTRQGH 113
Query: 72 QKDIADARCTALSYLIETIPAIPSLQC----LLLENVKGFEGSRSRDLITSMLTRAGFRF 127
+KD D R + L+ + +P L+ +L+ENV GFE S +R ++ R G+
Sbjct: 114 RKDKDDGRSQSFLRLLRDV--VPQLRSPPTHVLVENVVGFETSDTRADAIAVFRRLGYDT 171
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAA--HSSEASFCFETSSELMTELPKLKANTCNP 185
+EF+L+P FGVP SR RY+L+AK A +S T +T L
Sbjct: 172 REFMLTPRMFGVPYSRPRYFLLAKNGYRAGRRASYQPSSRATPRRSLTRGTGLGGEVGAT 231
Query: 186 L--LSR---MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAY 240
+ L+R +T +G D S D++R Y V+++D+ D+V + NCFTK+Y
Sbjct: 232 VRRLNRTPPITPYGSRDVNEGSADVFREYAVAERDVKIGLGAVDVVCRTSYKCNCFTKSY 291
Query: 241 THYAEG 246
Y +G
Sbjct: 292 GKYVKG 297
>gi|357135490|ref|XP_003569342.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
1 [Brachypodium distachyon]
Length = 359
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPC
Sbjct: 23 LTASGVQAEVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPC 81
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QP+TR GLQK ADAR + ++ + + P Q L +ENV GFE S + D + +L+
Sbjct: 82 QPYTRQGLQKHSADARAFSFIKILNLMSNMRFPP-QVLFVENVVGFEVSDTHDQLLEVLS 140
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSS---ELMTELPKL 178
F QEF+LSP QFGVP SR RY+ +AK + S CF+ +S +L+ L
Sbjct: 141 ILNFNTQEFILSPLQFGVPYSRPRYFCLAK--------QESMCFQNASANKKLLWTPTCL 192
Query: 179 KANT----------------CNPLLSRM-TLHGILDSTHPSGDLYRRYLVSDKDLLRRFH 221
K N+ C + + T D PS + + Y+V + R +
Sbjct: 193 KFNSTTQNSYDQNEDELEIACRSIKDFLETQIKEADGCTPSETVSQDYIVPLNLIERWGN 252
Query: 222 VFDIVNGKASSTNCFTKAYTHYAEG 246
DIV ++ CFTK+Y Y +G
Sbjct: 253 AMDIVYPESKRCCCFTKSYYRYVKG 277
>gi|391328705|ref|XP_003738825.1| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Metaseiulus
occidentalis]
Length = 457
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 10/238 (4%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-AMSPDVILMSPPCQPFTRT 69
EVV A+DINT AN VY+ NF T + R IQS S++E++ A++ D++ MSPPCQPFTR
Sbjct: 35 FEVVAAVDINTVANEVYQSNFA-TKVLNRQIQSLSVKELDGALACDLLTMSPPCQPFTRQ 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
G Q D R + +L++ +P + S + + LENV+GFE S L GF +
Sbjct: 94 GKQLGERDPRTQSFLHLLKVLPQLESRPKMIFLENVRGFESSPVCHGFLQFLENCGFVYA 153
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLS 188
+ LSPTQFG+PNSR RYY +A R ++ S+++ + + + P ++
Sbjct: 154 QCSLSPTQFGIPNSRLRYYCLAIRQDLVQTAYKHMFSVDPSKIIQDPSFFLSESEVPPMT 213
Query: 189 RMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
T+ L G L+ + L + V DIV ++++ CFTK Y Y +G
Sbjct: 214 --TVEHFL-----RGAENDELLLDEAVLEKNCMVLDIVLPSSTNSCCFTKNYGRYMKG 264
>gi|449441930|ref|XP_004138735.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
gi|449514978|ref|XP_004164528.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Cucumis
sativus]
Length = 385
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 127/276 (46%), Gaps = 46/276 (16%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A DIN AN VY+HNF +G NI+S + +I++ V L+SPPCQP+TR GL
Sbjct: 37 KVVQAFDINDKANDVYEHNFGDRPYQG-NIESLTAADIDSYQAHVWLLSPPCQPYTRQGL 95
Query: 72 QKDIADARCTALSYLIE-TIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR + ++E + A L +ENV GFE S + + +L + GF QEF
Sbjct: 96 QKQSGDARAFSFLKILELMVEASRPPVMLFMENVVGFETSDTHTKMIEILEKTGFSTQEF 155
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN--------- 181
+LSP QFGVP SR RY+ +AKR P E + L + P L ++
Sbjct: 156 ILSPMQFGVPYSRPRYFCLAKRKPLFFEKE----LYNNQLLWSPNPLLDSDANLESIETH 211
Query: 182 -----------TCNPLL--------------------SRMTLHGILDSTHPSGDLYRRYL 210
+C P+ S + L D+ + + +YL
Sbjct: 212 GSQATSDKLLLSCEPICRFLDHSNHQELSFYDASSIQSEVALEKNKDADEQVIEPFNQYL 271
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
V + R DIV + CFTK+Y Y +G
Sbjct: 272 VPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRYVKG 307
>gi|221039820|dbj|BAH11673.1| unnamed protein product [Homo sapiens]
Length = 306
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 119/238 (50%), Gaps = 53/238 (22%)
Query: 56 VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRD 114
+ILMSPPCQPFTR G Q D+ D+R + Y+++ +P + L + +LLENVKGFE S +RD
Sbjct: 1 MILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLENVKGFEVSSTRD 60
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
L+ + GF++QEFLLSPT G+PNSR RY+LIAK F+ +++ E
Sbjct: 61 LLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLME 114
Query: 175 LPKLKA--------NTCNPLLSR-----MTLHG---------ILDSTHPSGDLYRR---- 208
PK+++ + N + + ++L G IL + +++R+
Sbjct: 115 FPKIESVHPQKYAMDVENKIQEKNVEPNISLDGSIQCSGKDAILFKLETAEEIHRKNQQD 174
Query: 209 --------------------YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 175 SDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 232
>gi|296081999|emb|CBI21004.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 29/265 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + ++V A DIN AN VY+HNF +G NIQS + +++ L+SPPC
Sbjct: 30 LKRGGVNAKIVEAFDINNIANDVYQHNFGHRPCQG-NIQSLTAADLDRYRAHAWLLSPPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QP+TR GLQK DAR + ++E I P L L +ENV GFE S + + + +L+
Sbjct: 89 QPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLM-LFVENVVGFETSDTHEKMIEILS 147
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN 181
+ GF QEF+LSP QFGVP SR RY+ +AKR P + ++ +++L++ L +
Sbjct: 148 KTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPLSFENQL-----FNNQLLSTPSPLFGH 202
Query: 182 TCNPLL-----SRMTLHGILDSTHP---------------SGDLYRRYLVSDKDLLRRFH 221
+ L+ S +L S P + + + ++ V + R
Sbjct: 203 EDDSLIDEHDQSEKIWDKLLQSCEPVERFLEFKNTINPLETDNSWDQFSVPLSLIERWGS 262
Query: 222 VFDIVNGKASSTNCFTKAYTHYAEG 246
DIV + CFTK+Y Y +G
Sbjct: 263 AMDIVYPDSKRCCCFTKSYYRYVKG 287
>gi|224092438|ref|XP_002309610.1| DNA methyltransferase [Populus trichocarpa]
gi|222855586|gb|EEE93133.1| DNA methyltransferase [Populus trichocarpa]
Length = 350
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 128/254 (50%), Gaps = 24/254 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A DIN AN VY++NF +G NI++ + +++ L+SPPCQP+TR GL
Sbjct: 26 KVVEAFDINDKANDVYEYNFGHRPYQG-NIETLTAADLDNYGAHTWLLSPPCQPYTRQGL 84
Query: 72 QKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
QK DAR + ++E IP P++ L +ENV GFE S +R + +L + + Q
Sbjct: 85 QKQSGDARAFSFLKILELIPHTKQPPNM--LFVENVVGFETSDTRAKMIEILASSEYITQ 142
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA---------SFCFETSSELMT---ELP 176
EF+LSP QFGVP SR RY+ +AKR P + E S FE + +T + P
Sbjct: 143 EFILSPLQFGVPYSRPRYFCLAKRKPLSFHHEVCNNKLLWSPSPLFEHNENNVTDGWDQP 202
Query: 177 KLKANT----CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+ +T C P+ + S +G Y+V + R DIV +
Sbjct: 203 PVNWDTLIHSCEPVERFLEFKS--SSNRVTGGTGTDYIVPLSLIERWESAMDIVYPDSKR 260
Query: 233 TNCFTKAYTHYAEG 246
CFTK+Y Y +G
Sbjct: 261 CCCFTKSYYRYVKG 274
>gi|357135492|ref|XP_003569343.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like isoform
2 [Brachypodium distachyon]
Length = 374
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 132/280 (47%), Gaps = 47/280 (16%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPC
Sbjct: 23 LTASGVQAEVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPC 81
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QP+TR GLQK ADAR + ++ + + P Q L +ENV GFE S + D + +L+
Sbjct: 82 QPYTRQGLQKHSADARAFSFIKILNLMSNMRFPP-QVLFVENVVGFEVSDTHDQLLEVLS 140
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSS---ELMTELPKL 178
F QEF+LSP QFGVP SR RY+ +AK + S CF+ +S +L+ L
Sbjct: 141 ILNFNTQEFILSPLQFGVPYSRPRYFCLAK--------QESMCFQNASANKKLLWTPTCL 192
Query: 179 KANT----------------CNPLLSRMTLHGI----------------LDSTHPSGDLY 206
K N+ C + + I D PS +
Sbjct: 193 KFNSTTQNSYDQNEDELEIACRSIKDFLETQSINIGDQDCSGTISAFKEADGCTPSETVS 252
Query: 207 RRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ Y+V + R + DIV ++ CFTK+Y Y +G
Sbjct: 253 QDYIVPLNLIERWGNAMDIVYPESKRCCCFTKSYYRYVKG 292
>gi|359476106|ref|XP_002282454.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like [Vitis
vinifera]
Length = 393
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 46/287 (16%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + ++V A DIN AN VY+HNF +G NIQS + +++ L+SPPC
Sbjct: 30 LKRGGVNAKIVEAFDINNIANDVYQHNFGHRPCQG-NIQSLTAADLDRYRAHAWLLSPPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QP+TR GLQK DAR + ++E I P L L +ENV GFE S + + + +L+
Sbjct: 89 QPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPLM-LFVENVVGFETSDTHEKMIEILS 147
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE-----------ASFCFETSS- 169
+ GF QEF+LSP QFGVP SR RY+ +AKR P + ++ F E S
Sbjct: 148 KTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPLSFENQLFNNQLLSTPSPLFGHEDDSL 207
Query: 170 ------------ELMTELPKLK-----ANTCNPLLSRMTLHGILD-STHPSGDL------ 205
+L+ ++ NT NPL + + L ST SG+L
Sbjct: 208 IDEHDQSEKIWDKLLQSCEPVERFLEFKNTINPLETESSYLDTLSVSTDASGELENNERD 267
Query: 206 ------YRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ V + R DIV + CFTK+Y Y +G
Sbjct: 268 RSDSNSWDQFSVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKG 314
>gi|384251331|gb|EIE24809.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 414
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 94/148 (63%), Gaps = 5/148 (3%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A D+N AN VY+HNF +G N++ S ++ + + LM+PPCQPFTR GL
Sbjct: 31 QVVAAFDLNGVANDVYEHNFGWRPWQG-NLEGVSASVLDGFNAQLWLMAPPCQPFTRRGL 89
Query: 72 QKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
Q+D+AD R + LI +P++ P Q +++ENV GFE S R + + L+ AG QE
Sbjct: 90 QQDVADPRSASFLKLISILPSLRHPP-QYVIVENVVGFEASSMRKQLAAGLSAAGLDMQE 148
Query: 130 FLLSPTQFGVPNSRTRYYLIAK-RSPAA 156
FLLSP Q G+P SR RYY +A+ R+P+
Sbjct: 149 FLLSPLQLGIPYSRPRYYALARQRTPSG 176
>gi|294463393|gb|ADE77228.1| unknown [Picea sitchensis]
Length = 380
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +VV A DIN AN VYKHNF + +G NIQS + +++ + L+SPPC
Sbjct: 28 LEQSGIHAKVVEAFDINNIANEVYKHNFGHSPYQG-NIQSLTASQLDKFRANAWLLSPPC 86
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSML 120
QP+TR GLQKD DAR + ++E IP P++ L +ENV GFE S + + +L
Sbjct: 87 QPYTRQGLQKDAEDARAYSFMKILELIPLTLFPPTM--LFVENVVGFESSITHKRMMEVL 144
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ GF QEF+LSP QF VP SR RY+ +AK++
Sbjct: 145 EKIGFITQEFILSPLQFYVPYSRPRYFCLAKKA 177
>gi|353259789|gb|AEQ76841.1| DNA methyltransferase [Triticum aestivum]
Length = 373
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 132/282 (46%), Gaps = 52/282 (18%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L++ EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPC
Sbjct: 23 LASSGVRAEVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTAGDLDKYKAHAWLLSPPC 81
Query: 64 QPFTRTGLQKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITS 118
QP+TR GLQK ADAR A S+ L++ + P Q L +ENV GFE S + D + +
Sbjct: 82 QPYTRQGLQKRSADAR--AFSFIKILNLMQNMSFPP--QMLFVENVVGFEVSDTHDQLLA 137
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSS---ELMTEL 175
+L+ F QEF+LSP QFGVP SR RY+ +AK + S CF S +L+
Sbjct: 138 VLSTLSFNTQEFILSPLQFGVPYSRPRYFCLAK--------QESMCFPNPSVNDKLLRTP 189
Query: 176 PKLKANT-----------------CNPLLSRMTLHGI--------------LDSTHPSGD 204
L NT CNP+ + + I D P
Sbjct: 190 TCLTLNTTRTQNSYDQNEDDLEVVCNPIRNFLEAQSIGDKESSAIISGFKEADGCTPIET 249
Query: 205 LYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
Y V + R + DIV ++ CFTK+Y Y +G
Sbjct: 250 ASHDYTVPLSLIERWGNAMDIVYPESKRCCCFTKSYYRYVKG 291
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + ++V A DIN AN VY+HNF +G NIQS + +++ L+SPPC
Sbjct: 880 LKRGGVNAKIVEAFDINNIANDVYQHNFGHRPYQG-NIQSLTAADLDRYRAHAWLLSPPC 938
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLT 121
QP+TR GLQK DAR + ++E I P L L +ENV GFE S + + + +L+
Sbjct: 939 QPYTRQGLQKHSGDARAFSFLKILELIQHTLHPPL-ILFVENVVGFETSDTHEKMIEILS 997
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE 160
+ GF QEF+LSP QFGVP SR RY+ +AKR P++ ++
Sbjct: 998 KTGFVTQEFILSPIQFGVPYSRPRYFCLAKRKPSSFENQ 1036
>gi|328869161|gb|EGG17539.1| DNA (cytosine-5-)-methyltransferase [Dictyostelium fasciculatum]
Length = 373
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 38/265 (14%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF-------------------PRTNLRGRNIQS 43
+LS F+ V + DINT+AN+ Y ++ + ++I +
Sbjct: 18 KLSGVPFT--VKQSFDINTTANTCYNYSIHSLSNTDNNNNTTNSKSKKKNVVVNNKSIDA 75
Query: 44 FSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQC-LLLE 102
+++++ + + LMSPPCQPF R GL+K + D R + L+ + + S +L+E
Sbjct: 76 LTVKDLESYKANTWLMSPPCQPFCRVGLEKGLEDNRTNSFVNLLTLLGKLESPPTYILIE 135
Query: 103 NVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEAS 162
NV GFE S +R+L+ R +++QEF LSPTQFG+PN R RY+ IAK S + +
Sbjct: 136 NVFGFEKSDARELLIETFMRLKYQYQEFHLSPTQFGLPNQRLRYFCIAKLSDKPTIRKIN 195
Query: 163 FCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLL-RRFH 221
++ E+P K T P + LD+T+P + Y ++ + + LL +R
Sbjct: 196 --------ILKEIPTFK--TIEP----SAISQYLDTTNPE-ETYEKFKIPQETLLSKRGM 240
Query: 222 VFDIVNGKASSTNCFTKAYTHYAEG 246
+FDI +TNCFT++Y+ + EG
Sbjct: 241 LFDIKTMGEKTTNCFTRSYSKFVEG 265
>gi|19112479|ref|NP_595687.1| DNA methyltransferase [Schizosaccharomyces pombe 972h-]
gi|730347|sp|P40999.1|PMT1M_SCHPO RecName: Full=tRNA (cytosine(38)-C(5))-methyltransferase; AltName:
Full=DNA (cytosine-5)-methyltransferase-like protein 2;
Short=Dnmt2; AltName: Full=M.SpomI; AltName:
Full=SpIM.SpoI
gi|563911|emb|CAA57824.1| methyltransferase [Schizosaccharomyces pombe]
gi|5689984|emb|CAB52029.1| DNA methyltransferase homolog [Schizosaccharomyces pombe]
Length = 330
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 21/237 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
++V AIDIN AN +Y N + + +I + + ++ +A + MSP CQPFTR G
Sbjct: 31 DIVCAIDINPQANEIYNLNHGKL-AKHMDISTLTAKDFDAFDCKLWTMSPSCQPFTRIGN 89
Query: 72 QKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
+KDI D R A ++ +P + +L + +L+ENV+GFE S++ + +L G+ E
Sbjct: 90 RKDILDPRSQAFLNILNVLPHVNNLPEYILIENVQGFEESKAAEECRKVLRNCGYNLIEG 149
Query: 131 LLSPTQFGVPNSRTRYYLIAKRS-PAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
+LSP QF +PNSR+R+Y +A+ + S + F F ++ E+ +++
Sbjct: 150 ILSPNQFNIPNSRSRWYGLARLNFKGEWSIDDVFQFSEVAQKEGEVKRIR---------- 199
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
D D + Y+V + L + H FDIV +SS CFT+ YTH +G
Sbjct: 200 -------DYLEIERD-WSSYMVLESVLNKWGHQFDIVKPDSSSCCCFTRGYTHLVQG 248
>gi|303285424|ref|XP_003062002.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226456413|gb|EEH53714.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 338
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLR-GRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
V A D+N A Y NF RN+ S+ I+A + + L+SPPCQPFTR G
Sbjct: 37 VAAAFDLNPHACDTYAFNFGDAARPIARNLASYPAASIDAHAASLWLLSPPCQPFTRQGA 96
Query: 72 QKDIADARCTALSYLIETIPAIPSLQC-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
++D+ D R + L++ +P + + LL+ENV GFE S +RD + + L G+ +E
Sbjct: 97 KRDVDDGRAESFLRLLDVVPTLANAPSHLLVENVVGFERSETRDALLATLRAMGYTTRER 156
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+LSP QFGVP SR RY+ +AKR+P + E
Sbjct: 157 MLSPRQFGVPYSRPRYFCLAKRAPLRWVDDVFSGIE------------------------ 192
Query: 191 TLHGILDSTHPSG-DLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
HG D G D++ + V D+++ D+V NCFTK+Y Y +G
Sbjct: 193 --HGDDDEGADEGADVWTTHAVPRADVVKALASADVVTRDDRKCNCFTKSYGKYVKG 247
>gi|242058009|ref|XP_002458150.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
gi|241930125|gb|EES03270.1| hypothetical protein SORBIDRAFT_03g027700 [Sorghum bicolor]
Length = 233
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 91/148 (61%), Gaps = 10/148 (6%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 31 EVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPCQPYTRQGL 89
Query: 72 QKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
QK ADAR A S+ L++ + P Q L +ENV GFE S + D + +L+ F
Sbjct: 90 QKHSADAR--AFSFIKILNLMQDMSYPP--QMLFVENVVGFEVSDTHDQLLEVLSSLNFN 145
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
QEF+LSP QFGVP SR RY+ +AKR P
Sbjct: 146 TQEFILSPLQFGVPYSRPRYFCLAKREP 173
>gi|328769954|gb|EGF79997.1| hypothetical protein BATDEDRAFT_35320 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 125/250 (50%), Gaps = 21/250 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L A +VV A DIN AN+ Y HNF + ++IQ + +E+ + LMSPPC
Sbjct: 21 LEWAAIDAKVVAAFDINPQANACYNHNFGLEPVE-KSIQDLNPKELERYDANCWLMSPPC 79
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QP+TRTG Q D DAR +L++T+ + S + +ENV FE SR+R + +L++
Sbjct: 80 QPYTRTGKQLDDKDARAQGFLFLLDTLSQMASPPMYIFIENVANFEQSRTRQKLIDILSK 139
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSELMTELPK 177
+ +QE+LL+P QFG+PN R RYYL A++ P + F S M E P
Sbjct: 140 LDYIYQEWLLNPVQFGIPNDRPRYYLTARKQDRTTLPDSLLQPNLFYGRLSRSWMFEPPF 199
Query: 178 LKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFD---IVNGKASSTN 234
++ +T+ L + D + + LLR FD I + T+
Sbjct: 200 --------VVGTLTVGEFLQNDILCNDPVFKI---PERLLRSRGSFDPLVIAKPSHTRTS 248
Query: 235 CFTKAYTHYA 244
CFTKAY H+
Sbjct: 249 CFTKAYGHHG 258
>gi|56385094|gb|AAV85978.1| 5' cytosine DNA methyl transferase-like protein [Pristionchus
pacificus]
Length = 313
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + + A DINT+ N +Y+HNFP T L+ NIQ S+ ++ + ++ MSPPC
Sbjct: 26 LKRTSIPFHIAAAFDINTTTNVIYRHNFPSTKLKESNIQGVSVSSLDKLGAELWTMSPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QPFT G +K D RC + L+ + + + + + +ENV F + + L
Sbjct: 86 QPFTLKGNRKGDDDPRCDSFKKLLHCLNKMSNRPRWIFIENVSAFHSTSMHSTLIETLNT 145
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANT 182
G+R +E++LSP Q G+PNSR RYYL+A E E S L + ++
Sbjct: 146 IGYRIEEYMLSPVQLGIPNSRPRYYLLASL------MEGPVHNEYVSHLYQYIDGVEE-- 197
Query: 183 CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTH 242
C R L +D+ YL SDK IV + S++CFTK+YT
Sbjct: 198 CEMSTVREYLSDNVDTA---------YLSSDKVDANN---LSIVEPSSISSSCFTKSYTQ 245
Query: 243 YAEG 246
+ G
Sbjct: 246 FLVG 249
>gi|339237069|ref|XP_003380089.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
gi|316977147|gb|EFV60295.1| putative type II DNA modification methyltransferase [Trichinella
spiralis]
Length = 298
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 17/234 (7%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A DI+ + NS Y NF R RNI S + E++ + D ++SPPCQPF +G ++
Sbjct: 26 VGAYDIDETCNSTYVANFGGDIFRRRNICSLTWNELDQLQSDFWMLSPPCQPFMLSGNRR 85
Query: 74 DIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLL 132
D+ D+R ++IE + + S + +LLENV GF S + +T L G+ + F+L
Sbjct: 86 DVNDSRAEPFVHIIEVLTKMQSFPKYILLENVPGFINSVACTNLTETLEMKGYNSKIFIL 145
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTL 192
P FG+PN R R YLIA+ H S + E ++ PK+ C+ +S
Sbjct: 146 DPYDFGIPNHRKRAYLIAE-----HESVDDLVAVDACEQLSNCPKV---VCSKPISEFLC 197
Query: 193 HGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L T ++YLV ++ L+ + DIV +S+NCFTK Y Y +G
Sbjct: 198 --TLQETE-----LQKYLVPERLLIHK-DCMDIVCRDDTSSNCFTKGYGRYVKG 243
>gi|218188646|gb|EEC71073.1| hypothetical protein OsI_02832 [Oryza sativa Indica Group]
Length = 353
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+ NF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 31 EVVEAFDINDVANDVYELNFGHRPYQG-NIQTLTASDLDKYKAQAWLLSPPCQPYTRQGL 89
Query: 72 QKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
QK ADAR + ++ + + P Q L +ENV GFE S + D + +L+ F QE
Sbjct: 90 QKHSADARAFSFIKILNLMKNMCFPP-QMLFVENVVGFEVSDTHDQLIEVLSDLNFNTQE 148
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
F+LSP QFG+P SR RY+ +AKR P + + + + L + N CNP
Sbjct: 149 FILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLLRTPTFLTLVRAGHNRCNP 204
>gi|222618843|gb|EEE54975.1| hypothetical protein OsJ_02581 [Oryza sativa Japonica Group]
Length = 353
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+ NF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 31 EVVEAFDINDVANDVYELNFGHRPYQG-NIQTLTASDLDKYKAQAWLLSPPCQPYTRQGL 89
Query: 72 QKDIADARCTALSYLIETIPAI--PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
QK ADAR + ++ + + P Q L +ENV GFE S + D + +L+ F QE
Sbjct: 90 QKHSADARAFSFIKILNLMKNMCFPP-QMLFVENVVGFEVSDTHDQLIEVLSDLNFNTQE 148
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
F+LSP QFG+P SR RY+ +AKR P + + + + L + N CNP
Sbjct: 149 FILSPLQFGIPYSRPRYFCLAKREPVSFQNPSDNSKLLRTPTFLTLVRAGHNRCNP 204
>gi|42766604|gb|AAS45432.1| At5g25480 [Arabidopsis thaliana]
Length = 176
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A +IN SAN VY+HNF +G NIQS + +++ + D L+SPPCQP+TR GL
Sbjct: 39 EVVEAFEINDSANDVYQHNFKHRPYQG-NIQSLTAADLDKYNADAWLLSPPCQPYTRQGL 97
Query: 72 QKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
QK DAR + ++E IP Q L +ENV GFE S + + LT+ + QEF
Sbjct: 98 QKHSGDARAFSFLRILELIPHTTKPPQMLFVENVVGFETSDTHMEMIGTLTKLDYVTQEF 157
Query: 131 LLSPTQFGVPNSRTRYY 147
+LSP QFGVP SR RY+
Sbjct: 158 ILSPLQFGVPYSRPRYF 174
>gi|298714740|emb|CBJ25639.1| Cytosine-C5 specific DNA methyltransferase [Ectocarpus siliculosus]
Length = 412
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 127/251 (50%), Gaps = 38/251 (15%)
Query: 8 AFSLEV-VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
A SLE V + +I++ ANSVY+HNFP ++ R+I+ S ++I + D+ L+SPPCQPF
Sbjct: 75 AVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIE-VDADIWLLSPPCQPF 133
Query: 67 TRTGLQKDIADARCTALSYLI---ETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
R G + D D R + +L+ +TI PS L LENV+GFEGS + + L
Sbjct: 134 CRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSF--LFLENVQGFEGSHAHLRLLETLIAR 191
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA-----SFCFETSSELMTEL--- 175
GF +++LLSP Q G+PNSR RYY +A+R A EA SF + ++ + L
Sbjct: 192 GFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGMGEATDVKKSFPQDVAAVPLRPLSKY 251
Query: 176 --PKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASST 233
P L PLL L + LR FD+V +++ T
Sbjct: 252 LDPSLYGEAAVPLL-----------------LSPKACSHANPSLR----FDVVTLQSTET 290
Query: 234 NCFTKAYTHYA 244
FTK Y +A
Sbjct: 291 TTFTKGYRKHA 301
>gi|302673748|ref|XP_003026560.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
gi|300100243|gb|EFI91657.1| hypothetical protein SCHCODRAFT_62152 [Schizophyllum commune H4-8]
Length = 345
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 122/261 (46%), Gaps = 53/261 (20%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLR-----------------GRNIQSFSIEEINAMSP 54
+V A D + +A VYKHNFP T ++ +I + + + + P
Sbjct: 27 QVACAFDWDQAAEQVYKHNFPATPVKRVRDMIPHAHRYTDLSTQVDISTLTASSLRDLFP 86
Query: 55 DV--ILMSPPCQPFTRTGLQ-KDIADARCTALSYLIETIPAIPSL-------QCLLLENV 104
D+ L+SP CQP+T K D R + +L++ + +P L + LL+ENV
Sbjct: 87 DIDIWLLSPACQPYTVLNPNGKGAQDPRAQSFLHLVQVV--LPDLAREGAAPRYLLVENV 144
Query: 105 KGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFC 164
GFE S +R L S+L G+ EFLL+P QFG+PNSR RYYL+A+R P
Sbjct: 145 AGFEQSTTRQLTLSILQSMGYHCAEFLLTPLQFGIPNSRLRYYLLARRDP---------- 194
Query: 165 FETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFD 224
P + + + +L + HG + P D +Y + DK L++ +FD
Sbjct: 195 ----------FPSISSKSAASVLRYIPGHG----SGPWIDPPAKYTIPDKVLVKWGWLFD 240
Query: 225 IVNGKASSTNCFTKAYTHYAE 245
IV T CFT+ YT E
Sbjct: 241 IVYPSDRRTCCFTRGYTKLVE 261
>gi|213403582|ref|XP_002172563.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000610|gb|EEB06270.1| tRNA (cytosine-5-)-methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 326
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 25/239 (10%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
+VV A+DIN AN +Y NF + + +I + + E+++A+ D+ +SP CQP+TR G
Sbjct: 31 FKVVLAVDINPLANQIYNENFGKIA-KHYDISTLTKEQLDALRCDLWTLSPSCQPYTRLG 89
Query: 71 LQKDIADARCTALSYLIETIPAIP-SLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
Q+ AD R A +++E +P + + +ENV GFE S + + +L +G+ F E
Sbjct: 90 KQQGHADPRAAAFLHVLEILPTCSYKPKFIFIENVFGFETSWTAEKCREVLKASGYVFHE 149
Query: 130 FLLSPTQFGVPNSRTRYYLIA--KRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLL 187
LLSP Q G+PNSR R+Y +A KR +S F KA T P+
Sbjct: 150 VLLSPFQIGIPNSRLRWYGLARLKRDEIENSWNPKLSFPD-----------KAETIRPIN 198
Query: 188 SRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + ++ D+ ++Y H DIV + + CFT+ YTH +G
Sbjct: 199 NYLDKEVNMEKHSVPVDILQKY----------GHQLDIVKPSDTHSCCFTRGYTHLVQG 247
>gi|328774327|gb|EGF84364.1| hypothetical protein BATDEDRAFT_29368 [Batrachochytrium
dendrobatidis JAM81]
Length = 349
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 128/244 (52%), Gaps = 11/244 (4%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
LS + +V+ A D+N +AN VY+ P + RNI S +++A D+ L+SPPC
Sbjct: 24 LSKTHIAFQVLQAFDMNINANLVYQTTHPTVPVSVRNIGFLSPIDLDAFQADMFLLSPPC 83
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QP++R G +K I D+R + L+++I + + +L+ENV GFE S + ++ L
Sbjct: 84 QPYSRKGSRKGINDSRADSFVQLLDSIKKMQQKPKWMLVENVYGFETSDTFTILKEKLV- 142
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANT 182
+ Q F L+P FG+P SR R +++AK + + + +T S + K
Sbjct: 143 GEYDIQSFELNPWHFGIPYSRPRIFILAKLR-VCNQCKQDYRLDTDSH---QGDHEKCRD 198
Query: 183 CNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTH 242
P + L G LD+ + S D LV+++DL FD+V +++ + CFTKAY
Sbjct: 199 TTPQI----LAGFLDNPN-SEDTNPYMLVTEQDLWAAARHFDVVGPESTRSCCFTKAYGS 253
Query: 243 YAEG 246
YA G
Sbjct: 254 YARG 257
>gi|326427797|gb|EGD73367.1| methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 519
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
R +S+E V D+NT+AN VY+HN + + S I+A++P ++
Sbjct: 36 RAGQAPWSVEDVRPFDVNTAANKVYQHN---------HSIAPSPRGIDALTPRHVRDSNL 86
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDL 115
LMSPPCQP+TR G Q D+ D R + ++IE + + S Q L LENVK FE S +R
Sbjct: 87 WLMSPPCQPYTRIGKQLDVEDPRAASFLHMIEMLSKMESPPQLLFLENVKNFEHSETRRR 146
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L + + QEFL+SPTQ G+PN+R RYYL+A RS
Sbjct: 147 LLHVLHQRNYSVQEFLVSPTQLGIPNTRLRYYLLASRS 184
>gi|119606625|gb|EAW86219.1| hCG23994, isoform CRA_c [Homo sapiens]
gi|167887562|gb|ACA05986.1| tRNA aspartic acid methyltransferase 1 variant 1 [Homo sapiens]
Length = 345
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 117/281 (41%), Gaps = 97/281 (34%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFT
Sbjct: 28 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT---- 83
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
RDL+ + GF++QEFL
Sbjct: 84 -----------------------------------------RDLLIQTIENCGFQYQEFL 102
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA--------NTC 183
LSPT G+PNSR RY+LIAK F+ +++ E PK+++ +
Sbjct: 103 LSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVE 156
Query: 184 NPLLSR-----MTLHGILDSTHPSGDLYR------------------------------- 207
N + + ++ G + + L++
Sbjct: 157 NKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTD 216
Query: 208 --RYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 217 VNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 257
>gi|145348185|ref|XP_001418536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578765|gb|ABO96829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 371
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 27/250 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EV A D+N +A Y N+ T +++ S ++E + + MSPPCQPFTR GL
Sbjct: 54 EVCGAYDVNPNACDAYAMNYG-TRPSQKSLVSVAMETLVKTKAEAWAMSPPCQPFTRAGL 112
Query: 72 QKDIADARCTALSYLIE---TIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
+ D+ D R + L++ + A + + +ENV GFE SR RD + L+ + F Q
Sbjct: 113 KLDVDDGRAESFMRLVDEMVKMDASARPKYVFVENVVGFETSRMRDALRDALSASAFHAQ 172
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETS-SELMTELPKLKANTCNPLL 187
EF+L+PT FGVP SR RY+++A+ + A FE E+ P K + +
Sbjct: 173 EFILTPTMFGVPYSRPRYFMLARSTRA---------FEDGVDEIRRSPPPSKLSHRREWI 223
Query: 188 SRMT-----------LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCF 236
L LD + D++R V D+ R DIV + ++ NCF
Sbjct: 224 PDFDDVRDADVVVAPLSRFLD--RATDDIWRANAVKQDDVDRAKGSIDIVTAEDTTCNCF 281
Query: 237 TKAYTHYAEG 246
TK+Y Y +G
Sbjct: 282 TKSYYKYVKG 291
>gi|308805380|ref|XP_003080002.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058461|emb|CAL53650.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 394
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 118/237 (49%), Gaps = 13/237 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
D+N +A Y N L +N+ S+E + + + LMSPPCQPFTR G + D+ D
Sbjct: 49 DLNPNACDAYARNHGTRPL-AKNLAGVSMEALGKIGAEAWLMSPPCQPFTRQGKRLDVED 107
Query: 78 ARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSP 134
R + + L+E + + + +ENV GFE S+ R+L+ L F QEF+L+P
Sbjct: 108 GRADSFARLVEETTKLSVEKRPRYVFVENVVGFETSKMRELLIEKLREMEFHVQEFILTP 167
Query: 135 TQFGVPNSRTRYYLIAK-----RSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
T FGVP SR RY+L A+ R + A E S + +PK T + +
Sbjct: 168 TMFGVPYSRPRYFLCARTTHAFRDAVDNIRRAPPPCELSHKRHW-IPKYD-ETMDADVDV 225
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
L LDS + D++R + D+ R DIV+ ++ NCFTK+Y Y +G
Sbjct: 226 APLSRFLDSEN--SDIWRENALRQDDIDRAKGCIDIVSSSDTTCNCFTKSYFKYVKG 280
>gi|392596911|gb|EIW86233.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 401
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 128/269 (47%), Gaps = 37/269 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT--RT 69
+++ A D + SA VY N + + +I + E+ A+ D+ MSP CQP+T
Sbjct: 26 QLIRAYDWDQSACQVYTANHGPSIVSRTDISKLTANELAALGADIWFMSPSCQPYTVLNP 85
Query: 70 GLQKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSRDLITSMLTR 122
+ D R + ++I+ + +P+L + LL+ENV GF+ S +R + L R
Sbjct: 86 NRARGALDPRAQSFLHVIDDV--LPTLCEEGKQPRYLLVENVAGFQDSTTRTHLLDTLVR 143
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP-----------AAHSSEASFCFETSSE- 170
G+ EFLL+P QFG+PNSR RYYL+AK SP A ++A E SS
Sbjct: 144 LGYTTSEFLLTPMQFGIPNSRLRYYLLAKASPLKFAGLPAPNLARKRNDAGVEVEASSSP 203
Query: 171 -LMTELPKLKANTCNPLLSRMTLHG--ILDSTHPSGDL-----------YRRYLVSDKDL 216
++T +P + LS + + DS P G+L Y Y + DK L
Sbjct: 204 AVLTYIPGQGDPWIDDRLSPAAVDDPKVSDSQLPGGELASYLDKLTDNEYETYKIPDKVL 263
Query: 217 LRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ +FDIV A T CFT+ YT E
Sbjct: 264 SKWGRLFDIVLPSARRTCCFTRGYTQLVE 292
>gi|440789532|gb|ELR10839.1| C5 cytosine-specific DNA methylase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 366
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 126/259 (48%), Gaps = 44/259 (16%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
++VV A D+N AN Y+HNFP T R++ S + E+ A + D+ LMSPP + F
Sbjct: 35 VKVVGAYDLNDGANRTYRHNFPDTP---RDLASLDVHEVEAHAADIWLMSPPSRSFAH-- 89
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
L L+ + PS LLLENV GFE S SR + + L + G+R QEF
Sbjct: 90 ------------LLGLLARLDRPPSY--LLLENVYGFERSESRTQLVAALAQGGYRHQEF 135
Query: 131 LLSPTQFGVPN---------------SRTRYYLIAKRSPAAHS-SEASFCFETSSEL--- 171
LLSPTQFG+PN +R RY+L+AKR+P HS + A +SS +
Sbjct: 136 LLSPTQFGIPNQARRAPPPPPPLCTTTRLRYFLLAKRAP--HSFAWAPLAVASSSTIDPL 193
Query: 172 --MTELPKLKANTCNPLLSR-MTLHGILDSTHPSGDL-YRRYLVSDKDLLRRFHVFDIVN 227
+ + A +P + + D P L + V D + ++ +FDIV
Sbjct: 194 RFVPACAEQAATAADPAQPEPAAVAPLSDFLEPDDSLSVHAHRVPDALVWKKGLLFDIVG 253
Query: 228 GKASSTNCFTKAYTHYAEG 246
+ + CFTKAY + EG
Sbjct: 254 KEDMRSCCFTKAYARFVEG 272
>gi|413950583|gb|AFW83232.1| hypothetical protein ZEAMMB73_174249 [Zea mays]
Length = 172
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A DIN AN VY+HNF +G NIQ+ + +++ L+SPPCQP+TR GL
Sbjct: 31 EVVEAFDINDVANDVYEHNFGHRPCQG-NIQTLTASDLDKYKAHAWLLSPPCQPYTRQGL 89
Query: 72 QKDIADARCTALSY-----LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
QK ADAR A S+ L++ + P Q L +ENV GFE S + D + +L+ F
Sbjct: 90 QKHSADAR--AFSFIKILNLMQDMSYPP--QMLFVENVVGFEVSDTHDQLLEVLSSLNFN 145
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAK 151
QEF+LSP QFGVP SR RY+ + +
Sbjct: 146 TQEFILSPLQFGVPYSRPRYFCLVR 170
>gi|339776691|gb|AEK05285.1| DNA-methyltransferase 2 isoform 2 [Schistosoma mansoni]
Length = 360
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
EVV A++IN A VYK+NFP T R I+SFS + + +++ +V + PPCQPFTR G
Sbjct: 25 EVVAAVEINGVATDVYKYNFPNTLTLNRVIESFSPDYVCSLNANVWSLCPPCQPFTRLGK 84
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+ AD R ++ ++++ I +I ++LENVKGFE S + +L + +
Sbjct: 85 RMCEADNRSSSFFHVLDLI-SILKPAGIILENVKGFEHSEPWRRLIEVLNSCDYEY---- 139
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL-----MTELPKLKANTCNPL 186
+FG+PN R R+YL+A+ ++ +S S +L LP + +C+ +
Sbjct: 140 ----RFGIPNCRLRFYLLARLRSSSWNSNFKMGKSESIDLRPPIDAPMLPGCQCTSCSGV 195
Query: 187 LSRMTLHGILDSTH--------------PSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+S + H + T PS Y + +K L R F V DIV
Sbjct: 196 ISHIE-HTDDNFTEYIQFCRPISEFLLVPSDSSKELYFLDEKCLQRYFRVLDIVRSCDKK 254
Query: 233 TNCFTKAYTHYAEG 246
T CFTK Y+ EG
Sbjct: 255 TRCFTKGYSKRLEG 268
>gi|373487375|ref|ZP_09578043.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
gi|372009457|gb|EHP10077.1| DNA-cytosine methyltransferase [Holophaga foetida DSM 6591]
Length = 289
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A DI+ +AN Y HN R I S ++ A+ D LMSPPCQPF R G
Sbjct: 23 KVVRAYDISPAANDTYAHNHGDRPW-DREIASLDPSQVQALKADTWLMSPPCQPFCRMGN 81
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
+ + D R A +L++ + IP + L+LENV GF GS + +L+ L +G ++E+
Sbjct: 82 HRGLEDLRSKAFLHLMDLLRLIPP-EHLVLENVIGFLGSDAHELLAERLRASGMHWREYQ 140
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAA 156
L PTQFG+PN R R YL+A R P A
Sbjct: 141 LCPTQFGIPNLRPRVYLVASRHPIA 165
>gi|195996059|ref|XP_002107898.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
gi|190588674|gb|EDV28696.1| hypothetical protein TRIADDRAFT_49657 [Trichoplax adhaerens]
Length = 254
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 15/135 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+++ AIDINT AN+VY+HNF T + R I S++E+ ++ D+ MSPPCQPFTR G
Sbjct: 33 KILAAIDINTVANNVYRHNFGNTPVWQREIGKISLKELQELNGDLYTMSPPCQPFTRLGK 92
Query: 72 QKDIADARCTALSYLIETIPAIPS-LQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
+ D+ DAR ++ ++I+ + + + + +LLENVKGFE S +R+ EF
Sbjct: 93 KADVNDARTSSFLHVIDLLIKMENPPKYILLENVKGFETSAARN--------------EF 138
Query: 131 LLSPTQFGVPNSRTR 145
LL+P QFG+PNSR R
Sbjct: 139 LLTPLQFGIPNSRLR 153
>gi|159490457|ref|XP_001703193.1| DNA methyltransferase [Chlamydomonas reinhardtii]
gi|158270733|gb|EDO96569.1| DNA methyltransferase [Chlamydomonas reinhardtii]
Length = 539
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 12/147 (8%)
Query: 11 LEVVTAIDINTSANSVY--KHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
++V A+DINT+AN+VY +H T R ++ + +++A+ DV L++PPCQP+T
Sbjct: 59 VQVAAAVDINTAANAVYAVEHG---TEPRALDLTRVTAAQLDALCADVWLLTPPCQPYTT 115
Query: 69 T--GLQKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
T +KD AD R +L +L +P++ PS LLLENV GF GS SR ++ + L
Sbjct: 116 TTNARRKDTADPRAASLLHLASVLPSMRRPPSR--LLLENVPGFAGSHSRRVLAAALAGC 173
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ QEFL+SP Q GVP SR RY+ +A
Sbjct: 174 GYGLQEFLVSPHQLGVPYSRPRYFALA 200
>gi|358254165|dbj|GAA54195.1| DNA (cytosine-5-)-methyltransferase, partial [Clonorchis sinensis]
Length = 320
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 48 EINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKG 106
E+ A + D+ MSPPCQPFTR G QK D R + Y++ I AI P +LLENVKG
Sbjct: 1 EVTAFNADMWSMSPPCQPFTRLGNQKHEEDNRSASFFYVLGLIAAIRPKF--ILLENVKG 58
Query: 107 FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP--------AAHS 158
FE + +L G+R+Q+FLL+P QFGVPN R RYYL+A S A+H
Sbjct: 59 FEHTEPWCQFLKVLQTCGYRYQQFLLTPLQFGVPNCRLRYYLVASSSSDSACSGLFASHV 118
Query: 159 SEASFCFETSSELMTELPKLKANTCNPLLSRMT--------LHGILDSTHPSGDLYRRY- 209
++ +LP L C L ++ L P D +
Sbjct: 119 HDSDHANTIHLIPPADLPPLPGCECAVCLGHVSHITKPDENFDDYLPYCRPISDYLAQQQ 178
Query: 210 ------LVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ D L R FHV DIV + CFTK Y EG
Sbjct: 179 QHSKLDFLDDNCLKRYFHVLDIVRPCDRKSRCFTKGYQKRIEG 221
>gi|418066940|ref|ZP_12704295.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
gi|373559652|gb|EHP85941.1| C-5 cytosine-specific DNA methylase [Geobacter metallireducens
RCH3]
Length = 330
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ +V A D + +A Y+ NFP R +++ S E+ A D+ +SPPCQP+
Sbjct: 46 NVRIVGAFDQDPAALDTYRLNFPGHGARKVDLERVSAWELTAGGVDLWWLSPPCQPYCER 105
Query: 70 GLQKDIADARCTALSYLIETIPAIPS---LQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
G ++D+AD R +L +++E + IP + L LENV GF GS L+T +LT GF+
Sbjct: 106 GARRDLADPRARSLVHILELLERIPDDLLPRHLALENVAGFVGSEGHGLLTEVLTSRGFQ 165
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPL 186
+E L PT+ G P R RYYL A R E+ L A PL
Sbjct: 166 VRERFLCPTELGAPMRRPRYYLAASRD--------------------EMRPLVAPEPRPL 205
Query: 187 LSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFH----VFDIVNGKASSTNCFTKAY 240
L G LD G++ L+S D++ RF + D +G A +T CFT Y
Sbjct: 206 ---RPLAGYLDRRF-DGEVPTELLLS-PDVVARFGGALPILDSGDGSACAT-CFTAGY 257
>gi|404495112|ref|YP_006719218.1| DNA methyltransferase [Geobacter metallireducens GS-15]
gi|403377942|gb|ABB30500.2| DNA methyltransferase, putative [Geobacter metallireducens GS-15]
Length = 311
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ +V A D + +A Y+ NFP R +++ S E+ A D+ +SPPCQP+
Sbjct: 27 NVRIVGAFDQDPAALDTYRLNFPGHGARKVDLERVSAWELTAGGVDLWWLSPPCQPYCER 86
Query: 70 GLQKDIADARCTALSYLIETIPAIPS---LQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
G ++D+AD R +L +++E + IP + L LENV GF GS L+T +LT GF+
Sbjct: 87 GARRDLADPRARSLVHILELLERIPDDLLPRHLALENVAGFVGSEGHGLLTEVLTSRGFQ 146
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPL 186
+E L PT+ G P R RYYL A R E+ L A PL
Sbjct: 147 VRERFLCPTELGAPMRRPRYYLAASRD--------------------EMRPLVAPEPRPL 186
Query: 187 LSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFH----VFDIVNGKASSTNCFTKAY 240
L G LD G++ L+S D++ RF + D +G A +T CFT Y
Sbjct: 187 ---RPLAGYLDRRF-DGEVPTELLLS-PDVVARFGGALPILDSGDGSACAT-CFTAGY 238
>gi|426201930|gb|EKV51853.1| hypothetical protein AGABI2DRAFT_198459 [Agaricus bisporus var.
bisporus H97]
Length = 371
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A D + A VY+ N ++ +I S+ ++ + D L+SP CQP+T
Sbjct: 28 VVQAFDWDRVACQVYRINHSPDIIKNTDISKLSVTQLANFNADFWLLSPACQPYTVLNPN 87
Query: 73 -KDIADARCTALSYLIETI-PAIPSLQCL----LLENVKGFEGSRSRDLITSMLTRAGFR 126
K D R + YL++ I P + + L L+ENV GFE S +R + S + G+R
Sbjct: 88 AKGATDPRARSFLYLVQDILPQLAKMNALPSRLLVENVAGFETSFTRQTLVSAMRSLGYR 147
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPA--AHSSEASFCFETSSELMTELPKLKANTCN 184
E LL+P QFGVPNSR RYY +AK+ P AH+ + E + +P + +
Sbjct: 148 TLELLLTPLQFGVPNSRLRYYFLAKKDPLRFAHTGK-----EDIDRIWRHIPGQGEDWID 202
Query: 185 PLLSRMT---------LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNC 235
L+ LD+ + D Y + DK L + +FD++ + + C
Sbjct: 203 DRFDDSKERNRVHIPRLNSYLDTPAETADY---YTIPDKVLFKWGSLFDVIYPSSCRSCC 259
Query: 236 FTKAYTHYAEG 246
FT+ YT G
Sbjct: 260 FTRGYTQLVRG 270
>gi|336363407|gb|EGN91799.1| hypothetical protein SERLA73DRAFT_118184 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378383|gb|EGO19541.1| hypothetical protein SERLADRAFT_453499 [Serpula lacrymans var.
lacrymans S7.9]
Length = 368
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 128/272 (47%), Gaps = 51/272 (18%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
LS S V+ A D + +A VY N+ + +I S S ++ + D+ L+SP C
Sbjct: 19 LSRSLRSGSVIQAFDWDQTACKVYAENYGFKLISKVDISSLSALDLASYRADIWLLSPSC 78
Query: 64 QPFTRTG-LQKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSRDL 115
QP+T +K +D R + +LIE + +P L + +L+ENV GFE S +R
Sbjct: 79 QPYTVLNPSRKGASDPRAASFLHLIEDV--LPELARQYSRPRYILIENVAGFEMSSTRQT 136
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ S L G+ E LL+P QFG+PNSR RYYL+A+ P FE+ S
Sbjct: 137 LLSTLKEIGYFVVELLLTPLQFGIPNSRLRYYLLARLIP----------FESVS------ 180
Query: 176 PKLKANTCNPLLSRMTLHGILDSTHP-----SGDLY-----RRYL------------VSD 213
L+ + C + + G D T P +GD + R YL V+D
Sbjct: 181 --LQDSDCGDIWRHIPGQGC-DWTDPRSINTAGDDFPVQELREYLDAENDVNIHSYKVTD 237
Query: 214 KDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ L + H+FDIV + T CFT+ YT E
Sbjct: 238 RVLQKWGHLFDIVLPSSRRTCCFTRGYTRLVE 269
>gi|328768493|gb|EGF78539.1| hypothetical protein BATDEDRAFT_13083 [Batrachochytrium
dendrobatidis JAM81]
Length = 350
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V+ + D+N ANS Y+HNF ++I + + ++I + L+SPPCQPFT+ G
Sbjct: 30 VLASFDVNEHANSCYQHNF-GIKPSNKSIDTLTAKDIEKYDSNCWLLSPPCQPFTQGGKS 88
Query: 73 KDIADARCTALSYLIETIP--AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
D D R AL +IE + AIP + + +ENV FE S R + L + + +E+
Sbjct: 89 LDHQDNRSLALLRIIEILQHIAIPP-RFVFVENVPNFETSECRSRLVQTLDQCNYDVKEY 147
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
L+SP Q G+ N R RYYL AK + + +++ +S ++T L + P+ +
Sbjct: 148 LISPIQIGISNDRRRYYLAAKLRSSISTGKSNLSCLQTSHMITRLDSESSGIALPIPPAI 207
Query: 191 TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHV-FDIVNGKASSTNCFTKAY-THYAEG 246
+ + P +LV ++ +L+R FD+V + +CFTKAY +H+ G
Sbjct: 208 STYLEQHCDIP------EFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSHHIIG 259
>gi|409050914|gb|EKM60390.1| hypothetical protein PHACADRAFT_167754 [Phanerochaete carnosa
HHB-10118-sp]
Length = 360
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG-L 71
V+ A D + +A VY+ N+ ++ +I + E+ + D+ L+SP CQP+T L
Sbjct: 39 VIRAYDWDQAACQVYQANYGPGLVKQADISLLTAGELAGLRADLWLLSPSCQPYTVLNPL 98
Query: 72 QKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSRDLITSMLTRAG 124
K D R + ++LI+ + +P L + +L+ENV GFE S +R+ L G
Sbjct: 99 AKGPEDPRAKSFAHLIQGV--LPELVDMGQQPRYILVENVAGFEASSTRE----QLDARG 152
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+ E LL+P QFG PNSR RYYL+AK P A + T L +P + +
Sbjct: 153 YNCLELLLTPLQFGTPNSRLRYYLLAKWRPLAFRNAG-----TPGRLARHIPGQGEDWSD 207
Query: 185 PLLSR--MTLHGILDSTHP---SGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKA 239
P + L G L + H D + + D+ L + +FDIV T CFT+
Sbjct: 208 PRSTSDAPVLFGDLKALHEYLDPDDTNEEFKIPDRVLEKWGRLFDIVLPSGKRTCCFTRG 267
Query: 240 YTHYAE 245
YT AE
Sbjct: 268 YTKLAE 273
>gi|39995337|ref|NP_951288.1| DNA methyltransferase [Geobacter sulfurreducens PCA]
gi|39982099|gb|AAR33561.1| DNA methyltransferase, putative [Geobacter sulfurreducens PCA]
Length = 305
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ VV A+D + +A + Y+ NFP R +++ S E+ A D+ +SPPCQP+
Sbjct: 21 GVRVVAAMDQDEAALATYRLNFPGHGARKVDLERVSAWELTAGGVDLWWLSPPCQPYCER 80
Query: 70 GLQKDIADARCTALSYLI--------ETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT 121
G+++D+AD R +L +++ E +P + L LENV GF GS + +T +L+
Sbjct: 81 GVRRDLADPRARSLVHILNLAARMSDEALP-----RHLALENVAGFVGSEAHGRLTEVLS 135
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN 181
G+R QE LL PT+ G+P+ R RYYL A R A +E+++ LP+
Sbjct: 136 SRGYRLQERLLCPTELGIPSRRPRYYLAASRESLA-----------PAEVLSPLPR---- 180
Query: 182 TCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAY 240
PL + L + + P+ L +V + F + D + A +T CFT Y
Sbjct: 181 --QPLAEYLDL--LPANGQPAELLLSPAIV--ERFGAGFRILDPADPDAYTT-CFTSGY 232
>gi|409910784|ref|YP_006889249.1| DNA methyltransferase [Geobacter sulfurreducens KN400]
gi|298504342|gb|ADI83065.1| DNA methyltransferase, putative [Geobacter sulfurreducens KN400]
Length = 305
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 14/167 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ VV A+D + +A + Y+ NFP R +++ S E+ A D+ +SPPCQP+
Sbjct: 21 GVHVVAALDQDDAALATYRLNFPGHGARKVDLERVSAWELTAGGVDLWWLSPPCQPYCER 80
Query: 70 GLQKDIADARCTALSYLIETIP-----AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAG 124
G+++D+AD R +L ++++ A+P + L LENV GF GS + +T +L G
Sbjct: 81 GVRRDLADPRARSLVHILDLAARMSDEALP--RHLALENVAGFVGSEAHGRLTEVLALRG 138
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+R QE LL PT+ G+P+ R RYYL A R +A ETSS L
Sbjct: 139 YRLQERLLCPTELGIPSRRPRYYLAASR-------QALAPVETSSPL 178
>gi|328772423|gb|EGF82461.1| hypothetical protein BATDEDRAFT_3612, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 344
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 12/238 (5%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V+ + D+N ANS Y+HNF ++I + + ++I + L+SPPCQPFT+ G
Sbjct: 29 VLASFDVNEHANSCYQHNF-GIKPSNKSIDTLTAKDIEKYDSNCWLLSPPCQPFTQGGKS 87
Query: 73 KDIADARCTALSYLIETIP--AIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
D D R AL +IE + AIP + + +ENV FE S R + L + + +E+
Sbjct: 88 LDHQDNRSLALLRIIEILQHIAIPP-RFVFVENVPNFETSECRSRLVQALDQCNYDVKEY 146
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
L+SP Q G+ N R RYYL AK + + +++ +S ++T L + P+ +
Sbjct: 147 LISPIQIGISNDRRRYYLAAKLRSSISTGKSNLSCLQTSHMITRLDSESSGIALPIPPAI 206
Query: 191 TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHV-FDIVNGKASSTNCFTKAY-THYAEG 246
+ + D+ +LV ++ +L+R FD+V + +CFTKAY +H+ G
Sbjct: 207 STY-----LEQHCDI-SEFLVPEQYILKRKTFRFDLVKPTDTRCSCFTKAYGSHHIIG 258
>gi|356528743|ref|XP_003532958.1| PREDICTED: LOW QUALITY PROTEIN: tRNA
(cytosine-5-)-methyltransferase-like [Glycine max]
Length = 348
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 43/253 (16%)
Query: 35 NLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI- 93
+L+ NI+ + +++ D L+SPPCQP+TR GLQKD DAR + ++E +P +
Sbjct: 14 SLQPENIKCLTAADLDKYGADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMPFLL 73
Query: 94 --PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
PS+ L +ENV GFE S + + +L + F QEF+L+P QFG+P SR RY+ +AK
Sbjct: 74 RPPSM--LFVENVVGFETSDTHAKLIEILEKTNFITQEFILTPLQFGIPYSRPRYFCLAK 131
Query: 152 RSPAAHSSEA--SFCFETSSELMTELPKLKAN-------------TCNPLLSRMTLHGIL 196
R P++ +E + ++S L + + +C P+ + L +
Sbjct: 132 RKPSSFVNECLNNLLIQSSPPLFGHFDTVADDDNSSKEDRQNLLQSCQPIEKFIELKNLS 191
Query: 197 DSTHPSGDLYRRYLVSDK------------DLLRRFHV-----------FDIVNGKASST 233
+ + R L +D + L ++++ D+V +
Sbjct: 192 NDIAVESEALRTDLSNDAPRTLGENNGHEYESLDQYYIHPSLIDRWGSAMDVVYPDSKRC 251
Query: 234 NCFTKAYTHYAEG 246
CFTK+Y Y +G
Sbjct: 252 CCFTKSYYRYVKG 264
>gi|255072031|ref|XP_002499690.1| DNA methyltransferase [Micromonas sp. RCC299]
gi|226514952|gb|ACO60948.1| DNA methyltransferase [Micromonas sp. RCC299]
Length = 401
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRG----RNIQSFS-IEEINAM--SPDVI 57
S+ S+ + +ID + AN+VY N+P N G RN++ S +E ++A DV
Sbjct: 81 SDMGASVTALASIDNSEVANAVYLANYPDENASGVLMRRNVEHLSSVETLDARFGGADVW 140
Query: 58 LMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLI 116
+SPPCQP+TR G + D R + + ++E +P + + + +L+ENV GFE S +R +
Sbjct: 141 TLSPPCQPYTRKGKRLHGEDPRAGSFARILEALPKLRAPPERILVENVVGFESSETRRAL 200
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
+ L AG+ ++E+ SP GVP +RTRYY +AKR P
Sbjct: 201 VAALDEAGYVWREYHASPVDIGVPCTRTRYYALAKRKP 238
>gi|390357256|ref|XP_001200726.2| PREDICTED: tRNA (cytosine-5-)-methyltransferase-like
[Strongylocentrotus purpuratus]
Length = 404
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 38 GRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ 97
G + F++++ + D+ +MSPPCQPFTR GL+ D DAR A ++ + +
Sbjct: 31 GLHCAGFTVDDFASFDADMFVMSPPCQPFTRVGLKGDKNDARTNAFFNIMRNLAEMAKKP 90
Query: 98 C-LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
LL+ENVKGF+ S +R+ + L + + FQEFLLSP G+PN R RY+++AK+ P
Sbjct: 91 TYLLVENVKGFDTSETRNFLVETLQKCNYVFQEFLLSPMNIGIPNQRVRYFMLAKQRPLQ 150
Query: 157 HSSE 160
E
Sbjct: 151 FKEE 154
>gi|393247766|gb|EJD55273.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 344
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 40 NIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ-KDIADARCTALSYLIETIPAIPSL-- 96
+I S + A + V L+SPPCQP+T K AD R ++ +L+ ++ +P L
Sbjct: 56 DISRLSAAVLAAYNASVFLLSPPCQPYTVLSPDAKGDADPRASSFHHLMFSV--LPDLAK 113
Query: 97 QC-----LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
QC + +ENV GF+ S + + ML + +EFLLSP QFG+PNSR R+YL+AK
Sbjct: 114 QCSLPRFVFVENVAGFKDSVTHRQLHEMLASLNYSTREFLLSPLQFGIPNSRKRFYLLAK 173
Query: 152 RSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLV 211
P + S E + T P LS +L LD + +V
Sbjct: 174 LGPLEFALPPSVFVEWTDPRDTNEP----------LSSESLARFLDQGTTETN---ECIV 220
Query: 212 SDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
DK LL+ H FDIV A T CFT+ YTH A+G
Sbjct: 221 PDKVLLKWAHEFDIVLPSAQRTCCFTRGYTHLAQG 255
>gi|14573297|gb|AAK68035.1| DNA methyltransferase 2c [Homo sapiens]
Length = 115
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 73/140 (52%), Gaps = 45/140 (32%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV AID+NT AN VYK+NFP T L + I+ ++EE + +S D+ILMSPPCQPFT
Sbjct: 10 QVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT---- 65
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
RDL+ + GF++QEFL
Sbjct: 66 -----------------------------------------RDLLIQTIENCGFQYQEFL 84
Query: 132 LSPTQFGVPNSRTRYYLIAK 151
LSPT G+PNSR RY+LIAK
Sbjct: 85 LSPTSLGIPNSRLRYFLIAK 104
>gi|409083019|gb|EKM83376.1| hypothetical protein AGABI1DRAFT_123710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 378
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 32/258 (12%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A D + A VY+ N ++ +I S+ ++ + D+ L+SP CQP+T
Sbjct: 28 VVQAFDWDRVACQVYRINHSPDIIKNTDISKLSVTQLANFNADLWLLSPACQPYTVLNPN 87
Query: 73 -KDIADARCTALSYLIETI-PAIPSLQCL----LLENVKGFEG-------SRSRDLITSM 119
K D R + YL++ I P + + L L+ENV GFE S +R + S
Sbjct: 88 AKGATDPRARSFLYLVQDILPQLAKMNALPSRLLVENVAGFESPPSLGKTSFTRQTLVSA 147
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA--AHSSEASFCFETSSELMTELPK 177
+ G+R E LL+P QFGVPNSR RYY +AK+ P AH+ + E + +P
Sbjct: 148 MRSLGYRTLELLLTPLQFGVPNSRLRYYFLAKKDPLRFAHTGK-----EDIDRIWRHIPG 202
Query: 178 LKANTCNPLLSRM---------TLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNG 228
+ + TL+ LD+ + D Y + DK L + +FD++
Sbjct: 203 QGEDWIDDRFDDSKERNRVHIPTLNSYLDTPAETADYYP---IPDKVLFKWGSLFDVIYP 259
Query: 229 KASSTNCFTKAYTHYAEG 246
+ + CFT+ YT G
Sbjct: 260 SSCRSCCFTRGYTQLVRG 277
>gi|303277675|ref|XP_003058131.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226460788|gb|EEH58082.1| DNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 416
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 14/239 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNL---RGRNIQSFSIEEINA---MSPDVILMSPPC 63
+E V AID + AN+VY NFP RG N++ ++ I+A + ++ +SPPC
Sbjct: 85 GVEHVAAIDNSEVANAVYAANFPNDATPPSRG-NVEHWTAARIDAEGLGAAELWTLSPPC 143
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTR 122
QP+TR G Q+ D R TA ++L+E P + + +L+ENV GFE S +RD + L
Sbjct: 144 QPYTRKGKQRHGDDPRATAFAHLLEIFPTLRARPDRVLVENVVGFETSETRDALIRALET 203
Query: 123 AGFRFQEFL-LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN 181
G+ ++EF+ SP GVPN+R RYY +AK+ +A F ++ A
Sbjct: 204 TGYAWREFVGASPADVGVPNARPRYYALAKKREVGGFDDARAPF-VAAAGSDGYDARGAA 262
Query: 182 TCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAY 240
L LD S DL V++K + D+V ++ + CFT Y
Sbjct: 263 AAAARPPPRPLAAYLDERAASDDLTVPSRVTEK----YWKWLDVVAPSSTRSECFTAGY 317
>gi|308805851|ref|XP_003080237.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
gi|116058697|emb|CAL54404.1| putative DNA methyltransferase (ISS) [Ostreococcus tauri]
Length = 382
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
Query: 1 AERLS-NHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD---- 55
A RL+ H L+ V AID + +AN+VY+ NF R NI+ + NA+ P
Sbjct: 46 ATRLALEHLVDLQDVVAIDNSDAANAVYEANFGDVPRRA-NIEHL---DANALFPSSERD 101
Query: 56 -VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSR 113
+ SPPCQP+TR GL D R + +I+ IP + + + + +ENV+GFE S +R
Sbjct: 102 YALTASPPCQPYTRRGLGLASEDPRAKSFHAVIDAIPNLSNPPRWVFVENVRGFESSDTR 161
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
+ L+ + +EF++ PT GVPN+R RYYLIA RSP S
Sbjct: 162 RALLDALSERDYDIREFIVDPTALGVPNTRERYYLIATRSPGGFS 206
>gi|50841408|gb|AAT84068.1| 5-cytosine DNA methyltransferase [Entamoeba invadens]
gi|440292743|gb|ELP85927.1| methyltransferase, putative [Entamoeba invadens IP1]
Length = 324
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 37/237 (15%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL--QK 73
AIDIN AN++Y+ N+ + + +N+ + S+E I +V MSPPCQP+ + + K
Sbjct: 38 AIDINEIANTIYEGNY-KEKVVVKNLDTVSVEWIEEKRANVWFMSPPCQPYNNSIMSKHK 96
Query: 74 DIADARCTALSYL----IETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
DI D R ++ +L ++ + P + + +ENV F+ S I +L + Q+
Sbjct: 97 DIDDPRAKSVLHLYRDVLKNMENKP--EHIFIENVPLFKESLVFKDIMCVLNELEYHIQD 154
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
++SP Q G+PNSRTRYY++A+++ FET +
Sbjct: 155 IVISPHQIGIPNSRTRYYVMARKTK----------FETPCTFVK-------------YEN 191
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+++ L++T + + V + LL++ +FDIV K+ T CFTK+YT EG
Sbjct: 192 VSVSTFLENT-----VDVNFEVKKELLLKKGMLFDIVGVKSQRTCCFTKSYTKIVEG 243
>gi|407040168|gb|EKE39997.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba nuttalli
P19]
Length = 330
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 37/235 (15%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL--QKDI 75
DIN AN +Y NF + ++ +N+ S SI++I +++ + MSPPCQP+ + + KDI
Sbjct: 45 DINEIANKIYSKNF-KEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPYNNSIMSKHKDI 103
Query: 76 ADARCTALSYLIETIPAIPSLQC----LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D R ++ +L I +P L + +ENV F+ S I ++L + + ++ +
Sbjct: 104 NDPRAKSVLHLYRDI--LPYLTNKPTHIFIENVPLFKESLVFKEIYNILIKNQYYIKDII 161
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
SP G+PNSRTRYY++A+ +P F+ +L E + +N +
Sbjct: 162 CSPIDIGIPNSRTRYYVMARLTP----------FKNDIQLHQEKESMISNYLD------- 204
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ + +S + DL +L++ +FDIV T CFTK+YT EG
Sbjct: 205 -NNVNESYYIPSDL----------ILKKGMLFDIVGKDDKRTCCFTKSYTKIVEG 248
>gi|313244000|emb|CBY14873.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 128/280 (45%), Gaps = 50/280 (17%)
Query: 11 LEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
L+V++A+DIN +A S YK H ++ +I + E+ + + + MSPPCQPFTR
Sbjct: 178 LQVLSAMDINNNATSCYKLNHMSMEKDVINTDINAAPWEQTSGYN--TLAMSPPCQPFTR 235
Query: 69 TGLQKDIADARCTAL-----SYLIETIPAIPSLQCLLLENVKGFEGSRS-RDLITSMLTR 122
G QKD D R L +P + +++ENVK FE S + +D + ++ +R
Sbjct: 236 NGKQKDKEDPRTKPLLSIIEKIKTTKKKFLP--RYIIMENVKFFEKSETCKDFLAALDSR 293
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANT 182
F +++FL+SPT G PN R+RY+LIAKR + + + PK K
Sbjct: 294 -NFIYRQFLISPTDLGTPNQRSRYFLIAKRGKHMKFHFDPYVINWKKKSAAKEPKNKKQK 352
Query: 183 CNP-------------------------------LLSRMTLHG----ILDSTHPSGDLYR 207
+ L + +H I D
Sbjct: 353 LDAREIPKANVKMYDNMDVFVRHDGPDANSQILGLKIKEKIHSLERYIQDLDFKEEVWNE 412
Query: 208 RYLVSDKDLLRRF-HVFDIVNGKASSTNCFTKAYTHYAEG 246
Y+++D+ L RRF +V DIV +S + CFTKAY YA+G
Sbjct: 413 IYVLTDQ-LKRRFLNVLDIVRTSSSRSICFTKAYGKYAQG 451
>gi|183230936|ref|XP_655267.2| DNA (cytosine-5)-methyltransferase [Entamoeba histolytica
HM-1:IMSS]
gi|45505012|gb|AAS66974.1| 5-cytosine DNA methyltransferase [Entamoeba histolytica]
gi|169802689|gb|EAL49892.2| DNA (cytosine-5)-methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702632|gb|EMD43233.1| DNA (cytosine5)-methyltransferase, putative [Entamoeba histolytica
KU27]
Length = 322
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 37/235 (15%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL--QKDI 75
DIN AN +Y NF + ++ +N+ S SI++I +++ + MSPPCQP+ + + KDI
Sbjct: 37 DINEIANKIYSKNF-KEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPYNNSIMSKHKDI 95
Query: 76 ADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D R ++ +L I +P L + + +ENV F+ S I ++L + + ++ +
Sbjct: 96 NDPRAKSVLHLYRDI--LPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIKDII 153
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
SP G+PNSRTRYY++A+ +P F+ +L E + +N
Sbjct: 154 CSPIDIGIPNSRTRYYVMARLTP----------FKNEIQLHQEKESMISN---------- 193
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ Y + +L++ +FDIV T CFTK+YT EG
Sbjct: 194 --------YLDNNVNESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEG 240
>gi|170084905|ref|XP_001873676.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651228|gb|EDR15468.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 330
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 38/252 (15%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPR--TNLRGRNIQSFSIEEINAMSPDVILMSP 61
LS + VV A D + A VYK N TN+ +I + ++ A+ D+ L+SP
Sbjct: 19 LSRSSLGGTVVRAFDWDQCACRVYKANHSNIVTNV---DISTLVAADLAALKADLWLLSP 75
Query: 62 PCQPFTRTGLQ-KDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSR 113
CQP+T + KD +D R + +LI+ + +P L Q LL+ENV GFE S +R
Sbjct: 76 ACQPYTILNPKAKDASDPRAQSFLHLIQNV--LPELGSTNQHPQRLLVENVAGFETSTTR 133
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMT 173
++ S+L G+ E LL+P QFG+PNSR RYYL+AK++P +A ++ ++
Sbjct: 134 QILVSILHSLGYSTLELLLTPLQFGIPNSRLRYYLLAKKAPL--DPDAIDHGSPTNSVVH 191
Query: 174 ELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASST 233
+L + +P + +LV DK L + +FDIV + T
Sbjct: 192 DLRRYLDRGYDP---------------------QEFLVPDKILKKWGRLFDIVLPSSRRT 230
Query: 234 NCFTKAYTHYAE 245
CFT+ YT E
Sbjct: 231 CCFTRGYTQLVE 242
>gi|383875353|pdb|3QV2|A Chain A, Structure Analysis Of Entamoeba Histolytica
Methyltransferase Ehmeth
Length = 327
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 37/235 (15%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL--QKDI 75
DIN AN +Y NF + ++ +N+ S SI++I +++ + MSPPCQP+ + + KDI
Sbjct: 42 DINEIANKIYSKNF-KEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPYNNSIMSKHKDI 100
Query: 76 ADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D R ++ +L I +P L + + +ENV F+ S I ++L + + ++ +
Sbjct: 101 NDPRAKSVLHLYRDI--LPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIKDII 158
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
SP G+PNSRTRYY++A+ +P F+ +L E + +N
Sbjct: 159 CSPIDIGIPNSRTRYYVMARLTP----------FKNEIQLHQEKESMISN---------- 198
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+ ++ Y + +L++ +FDIV T CFTK+YT EG
Sbjct: 199 --------YLDNNVNESYSIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEG 245
>gi|209875617|ref|XP_002139251.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
gi|209554857|gb|EEA04902.1| DNA (cytosine-5)-methyltransferase domain-containing protein
[Cryptosporidium muris RN66]
Length = 422
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 12/158 (7%)
Query: 2 ERLSNH--AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILM 59
E+L H A ++V+ A ++N + N++YK +F T + ++I+S +I++I + I +
Sbjct: 22 EKLVEHGQAIDIKVIKAFELNENCNNIYKRHFKDTQVCTKSIESLNIDDIPKAN---IWL 78
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-----PSLQCLLLENVKGFEGSRSRD 114
PCQPFTR G ++D D RC L +I+ + I PS+ +ENV FE SR+
Sbjct: 79 LGPCQPFTRGGAKRDSDDNRCKPLLKIIDLMYKIDVSNMPSIW--FIENVVNFEQSRTHK 136
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ M + + +FLLSPT +PN+R RYY +A R
Sbjct: 137 FMIDMFNDLDYTYIQFLLSPTLLNIPNTRVRYYCMAFR 174
>gi|167539782|ref|XP_001741349.1| DNA (cytosine-5)-methyltransferase [Entamoeba dispar SAW760]
gi|165894050|gb|EDR22134.1| DNA (cytosine-5)-methyltransferase, putative [Entamoeba dispar
SAW760]
Length = 322
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 37/235 (15%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL--QKDI 75
DIN AN +Y NF + ++ +N+ S SI++I +++ + MSPPCQP+ + + KDI
Sbjct: 37 DINEIANKIYSKNF-KEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPYNTSIMSKHKDI 95
Query: 76 ADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFL 131
D R ++ +L I +P L + +ENV F+ S I ++L + + ++ +
Sbjct: 96 NDPRAKSVLHLYRDI--LPFLINKPTHIFIENVPLFKESLVFKEIYNILIKNQYYIKDII 153
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMT 191
SP G+PNSRTRYY++A+ +P F+ +L E + +N +
Sbjct: 154 CSPIDIGIPNSRTRYYVMARLTP----------FKNEIQLHQEEESMISNYLD------- 196
Query: 192 LHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
D+ + S Y + +L++ +FDIV T CFTK+YT EG
Sbjct: 197 -----DNVNES------YYIPSDLILKKGMLFDIVGKDDKRTCCFTKSYTKIVEG 240
>gi|393218987|gb|EJD04475.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 348
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 33/241 (13%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A D + ++ VY+ N+ +R +I + + ++ + + + L+SP CQP+T
Sbjct: 29 VVRAYDWDQTSCRVYEANYGPGIVRKVDISTLTALDLASENAPLWLLSPSCQPYTVLNPS 88
Query: 73 -KDIADARCTALSYLIETIPAIPSL----QC---LLLENVKGFEGSRSRDLITSMLTRAG 124
K D R + +L++ + IP L QC +L+ENV GFE S +R ++ L
Sbjct: 89 AKGSQDPRAKSFLHLVQQV--IPELARIDQCPKWILVENVAGFEASSTRKILLETLHACN 146
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+ E LL+P QFG+PNSR RYYL+AK+ P++ +++ ET+
Sbjct: 147 YTTVELLLTPLQFGIPNSRLRYYLLAKQLPSSFANDTPEDCETTQ--------------- 191
Query: 185 PLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYA 244
L LD S + V D+ LLR +FDIV + + CFT+ YT
Sbjct: 192 -------LRAYLDRAADSAE-DETSSVPDRVLLRWGRLFDIVLPSSRRSCCFTRGYTQLV 243
Query: 245 E 245
E
Sbjct: 244 E 244
>gi|299755231|ref|XP_001828513.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
gi|298411129|gb|EAU93300.2| DNA methyltransferase ZMET4 [Coprinopsis cinerea okayama7#130]
Length = 330
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 55 DVILMSPPCQPFTRTGLQKDIA-DARCTALSYLIETI-PAIPSLQCL----LLENVKGFE 108
D+ L+SP CQP+T A D R + +L+ + P + CL L+ENV GFE
Sbjct: 21 DIWLLSPACQPYTVLNPNAQGAEDPRAQSYLHLLRNVLPGLEERGCLPGYVLVENVAGFE 80
Query: 109 GSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSS---- 159
GS +R L +L G+ QE LL+P QFG+PNSR RYY++A+R P SS
Sbjct: 81 GSTTRQLQLEVLKELGYHIQELLLTPLQFGIPNSRLRYYMLARRGKDFSRPGLGSSSGDG 140
Query: 160 -----EASFCFETSSE----LMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYL 210
E + E ++ +P A + L G LD S + +
Sbjct: 141 PRGEEEGVSVLDQGDEEEYRVLRHIPGQPAEWREEDVEE--LRGYLDE-ETSLEESNEFA 197
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
VSDK L + +FDIV + CFT+ YTH E
Sbjct: 198 VSDKVLSKWGRLFDIVLPSGRRSCCFTRGYTHLVE 232
>gi|389750852|gb|EIM91925.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 452
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 50/279 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + S EVV A D + A SVY N R +I + + + + A + D+ L+SP C
Sbjct: 22 LERSSVSGEVVQAFDWDQLACSVYNSNHEPKLARKVDIATLTPDILAAYAADLWLLSPSC 81
Query: 64 QPFTRTGLQ-KDIADARCTALSYLIETIPAIPSLQ-------CLLLENVKGFEGSRSRDL 115
QP+T Q K D R + +++ T+ +P L+ +L+ENV GFE S +R +
Sbjct: 82 QPYTVLNPQAKGADDPRAESFLWIVRTL--LPGLKEKGREPGWVLIENVAGFETSSTRQI 139
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP----------AAHSSEASFCF 165
+ ++ G+ E LL+P QFG+PNSR RYY++A+++P + +
Sbjct: 140 LIEVMKSLGYHTIELLLTPLQFGIPNSRLRYYMLARKTPFNIPLPPSSRPSDPTSNECAL 199
Query: 166 ETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYL--------------- 210
+ +P + +P R L ++S + D RRYL
Sbjct: 200 PPEDRVWRHIPGRGYDWVDP---RNGLD--VESVENNVDEIRRYLDRSKESRWKKVVGED 254
Query: 211 ----------VSDKDLLRRFHVFDIVNGKASSTNCFTKA 239
VSD+ L + +FD+V +A T CFT+
Sbjct: 255 GKERWMHPHMVSDRVLGKWGRLFDVVLPEARRTCCFTRV 293
>gi|395323231|gb|EJF55715.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 358
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG-L 71
+V A D + +A VY N ++ +I S + +I + + L+SP CQP+T L
Sbjct: 28 IVHAFDWDQAACRVYSANHSHVVVQKADISSLTAPDIAELDATLWLLSPSCQPYTVLNPL 87
Query: 72 QKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSRDLITSMLTRAG 124
K D R + L+E + +P L Q +L+ENV GFE S +R + + L
Sbjct: 88 AKGAEDPRAKSFIRLMEEV--LPELVQMGKHPQYMLVENVAGFETSSTRIRLLATLRAVK 145
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+ E LL+P QFG+PNSR RYYL+AK SP A ++ +++ + +P ++ +
Sbjct: 146 YSTVELLLTPLQFGIPNSRLRYYLLAKASPLAFAN----ANDSADRIWRHIPGHGSDWTD 201
Query: 185 P-------------LLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKAS 231
P R L + PS + + + L + +FDIV
Sbjct: 202 PRTQSEEESSEVEVAEVREYLDEDTGADPPS------HAIPQRVLEKWGRLFDIVRPSDK 255
Query: 232 STNCFTKAYTHYAE 245
T CFT+ YT AE
Sbjct: 256 RTCCFTRGYTKLAE 269
>gi|302843860|ref|XP_002953471.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
gi|300261230|gb|EFJ45444.1| hypothetical protein VOLCADRAFT_63767 [Volvox carteri f.
nagariensis]
Length = 302
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 52 MSPDVILMSPPCQPFTRT--GLQKDIADARCTALSYLIETIPAI-PSLQC----LLLENV 104
++ D+ L++PPCQP+T T ++D AD R +L +L+ PA+ P++Q L++ENV
Sbjct: 10 LAADLWLLTPPCQPYTTTSNARRRDTADPRAASLLHLMS--PAVLPAMQRPPTRLMMENV 67
Query: 105 KGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS------ 158
GF GS S ++ + L AG+ QEF++SP Q GVP SR RY+ +A R P +
Sbjct: 68 PGFVGSDSHKMMVAALGTAGYELQEFIVSPHQLGVPYSRPRYFALAVRRPLSFPRQYDCS 127
Query: 159 ----SEASFCF-------ETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYR 207
+ C TS E+ + T G+ S D +
Sbjct: 128 RGPLGQGMECRTRPGRSPATSEEVGAGPAADAEAAIATAAAGATKDGVSSS-----DPWV 182
Query: 208 RYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYT 241
Y VS L R + V D+V ++ NCFTK YT
Sbjct: 183 AYAVSAAQLARFWRVLDVVTPSSTYCNCFTKHYT 216
>gi|412986361|emb|CCO14787.1| tRNA (cytosine-5-)-methyltransferase [Bathycoccus prasinos]
Length = 443
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 26/162 (16%)
Query: 15 TAIDINTSANSVYKHNF----PRTNLRGRNIQSFSIEEINAMSPD---VILMSPPCQPFT 67
TAID N +AN+VYK NF T + NI+SF +E + A S D ++ +SPPCQP+T
Sbjct: 105 TAIDNNCNANAVYKANFMNLSSETRVLEGNIESFDVERLLASSVDGCEILTLSPPCQPYT 164
Query: 68 RTGLQKDIADARCTALSYLIETIP---------------AIPSLQCLLLENVKGFEGSRS 112
R G + DAR TAL+ +I+ A+P + +LLENV GFE
Sbjct: 165 RKGKNRGEKDARSTALARIIDIFEDAGEEKEESVGTRTTALP--KRILLENVVGFELGTE 222
Query: 113 RDLITSMLTRAGFRFQEFL-LSP-TQFGVPNSRTRYYLIAKR 152
R+ L + + +EF+ LSP T GVP R RYYL+A+R
Sbjct: 223 RERFIEALKKNEYHVKEFVGLSPETMLGVPVKRPRYYLLARR 264
>gi|401405250|ref|XP_003882075.1| putative DNA methyltransferase [Neospora caninum Liverpool]
gi|325116489|emb|CBZ52043.1| putative DNA methyltransferase [Neospora caninum Liverpool]
Length = 1250
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 26/175 (14%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNF--------------PRTNLRG--------RNIQSFS 45
A EVV ID+N +A VY+ N P L+ ++I S+
Sbjct: 362 ALPFEVVGVIDVNPTAMDVYRRNLLPPSAESPSASRRQPSQTLQSPGVPLTSTKSIDSYP 421
Query: 46 IEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ---CLLLE 102
A D+ L+SPPCQPFTR GLQK AD R + YL++ + +P Q LLLE
Sbjct: 422 ASFYGAFEADLWLVSPPCQPFTRIGLQKGNADRRNASFLYLLDVLCQLPHAQRPKYLLLE 481
Query: 103 NVKGFEGSRSRD-LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
NV FE S + D L+ ++ G++ F L+P FG+PN R+R ++ AK+S AA
Sbjct: 482 NVVRFEVSDTFDCLLHALECVCGYQVDVFHLNPLHFGIPNCRSRCFVTAKKSAAA 536
>gi|237834203|ref|XP_002366399.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
gi|211964063|gb|EEA99258.1| DNA methyltransferase 2, putative [Toxoplasma gondii ME49]
Length = 834
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 38 GRNIQSFSIEEI------NAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLI---E 88
GR F I N + DV L+SPPCQP+TR G ++D+ D R L +L+ E
Sbjct: 261 GRTANGFDTPSIKKKLRRNDAAADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLE 320
Query: 89 TIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYL 148
+ P L L LENV+GFE S++R + S+L + + +EFLLSPTQ G PN+R RYY
Sbjct: 321 RLKTPPKL--LFLENVRGFEESQTRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYC 378
Query: 149 I 149
+
Sbjct: 379 L 379
>gi|221486626|gb|EEE24887.1| DNA methyltransferase 2, putative [Toxoplasma gondii GT1]
Length = 830
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 5/103 (4%)
Query: 50 NAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLI---ETIPAIPSLQCLLLENVKG 106
N + DV L+SPPCQP+TR G ++D+ D R L +L+ E + P L L LENV+G
Sbjct: 279 NDAAADVWLLSPPCQPYTRGGKREDLHDPRARGLLHLLDCLERLKTPPKL--LFLENVRG 336
Query: 107 FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLI 149
FE S++R + S+L + + +EFLLSPTQ G PN+R RYY +
Sbjct: 337 FEESQTRQRLLSVLKKKAYTVEEFLLSPTQLGCPNTRVRYYCL 379
>gi|324516189|gb|ADY46452.1| tRNA (cytosine-5-)-methyltransferase [Ascaris suum]
Length = 193
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
E++ A DIN AN++YKHNFP T + NIQ+ + E + D+ MSPPCQPFT+ G
Sbjct: 35 FEMLAAFDINDVANAIYKHNFPCTTVHQCNIQALTSEFYDRQCADLWTMSPPCQPFTKKG 94
Query: 71 LQKDIADARCTALSYL---IETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
+Q+D+ D RC AL + +E + P + LENV GFE S + + +L + +
Sbjct: 95 MQRDVDDRRCDALMRICTALERMHEPPRF--IFLENVCGFETSTAHSIFVEVLAKLHYHM 152
Query: 128 Q 128
Q
Sbjct: 153 Q 153
>gi|401409426|ref|XP_003884161.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
gi|325118579|emb|CBZ54130.1| putative DNA methyltransferase 2 [Neospora caninum Liverpool]
Length = 794
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 5/101 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI---PSLQCLLLENVKGFEGSR 111
DV L+SPPCQP+TR G ++D+ D R L L++ + + P L L LENV+GFE S+
Sbjct: 207 DVWLLSPPCQPYTRGGKREDLHDPRARGLLNLLDCLERLADPPKL--LFLENVRGFEESQ 264
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+R + +L + ++ +EFLLSPTQ G PN+R RYY +A R
Sbjct: 265 TRARLLKVLRQRAYQVEEFLLSPTQLGFPNTRVRYYCLATR 305
>gi|392572088|gb|EIW65260.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 368
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 32/262 (12%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ A VV A D + +A VY N+ ++ +I S ++ + D+ L+SP C
Sbjct: 19 LAQSAARGNVVRAYDWDQAACRVYAANYGPKAVQKVDISSLEATDLAELDADLWLLSPSC 78
Query: 64 QPFTRTG-LQKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKGFEGSRSRDL 115
QP+T L K D R + L+E++ +P L Q LL+ENV GFE S +R+
Sbjct: 79 QPYTVLNPLAKGAEDPRAKSFIRLMESV--LPELVRLRKHPQKLLVENVAGFESSSTRER 136
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ + L G+ E LL+P QFG+PNSR RYYL+AK SP SE E + +
Sbjct: 137 LVANLRTLGYTTLELLLTPLQFGIPNSRLRYYLLAKFSP----SEFVGASEQEDRVWRHI 192
Query: 176 PKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYL------------VSDKDLLRRFHVF 223
P + + TL G + + R YL + +K L + +F
Sbjct: 193 PGRGTDWVD----TRTLSG--EEAPGAVTEVRNYLDEESSVEPHPHAIPEKVLEKWGRLF 246
Query: 224 DIVNGKASSTNCFTKAYTHYAE 245
DIV A T CFT+ YT E
Sbjct: 247 DIVLPSARRTCCFTRGYTKLVE 268
>gi|237835125|ref|XP_002366860.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
gi|211964524|gb|EEA99719.1| DNA methyltransferase, putative [Toxoplasma gondii ME49]
Length = 1172
Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 11 LEVVTAIDINTSANSVYKHNF-----------------------------PRTNLRGRNI 41
EVV ID+N +A VY+ N P T+ + +I
Sbjct: 376 FEVVGVIDVNPTAMDVYRQNLLPCSTSPSPRRPSSPPKSFPSSRLPSASAPLTSTK--SI 433
Query: 42 QSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ---C 98
SF A D+ L+SPPCQPFTR GLQK AD R + YL++ + +P Q
Sbjct: 434 DSFPASFYGAFHADIWLVSPPCQPFTRIGLQKGNADRRNVSFLYLLDVLCQLPHAQRPKY 493
Query: 99 LLLENVKGFEGSRSRD-LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+LLENV FE S + D L+ ++ G+ F L+P FG+PN R+R ++ AK+S +
Sbjct: 494 ILLENVVRFEVSDTFDCLVHALECVCGYEVNVFHLNPLHFGIPNCRSRCFVTAKKSESPQ 553
Query: 158 SSEA 161
S+A
Sbjct: 554 RSDA 557
>gi|403411631|emb|CCL98331.1| predicted protein [Fibroporia radiculosa]
Length = 339
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 55 DVILMSPPCQPFTRTG-LQKDIADARCTALSYLIETIPAIPSL-------QCLLLENVKG 106
++ L+SP CQP+T L K AD R + +LIE + +P + + +L+ENV G
Sbjct: 13 ELWLLSPSCQPYTVLNPLAKGAADPRAKSFIHLIEDV--LPEMVRDSTHPKYMLVENVAG 70
Query: 107 FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
FE S +R + L G+ E LL+P QFG+PNSR RYYL+AK P
Sbjct: 71 FERSSTRLRLLKTLDSLGYGVLELLLTPLQFGIPNSRLRYYLLAKAQPMPFPG----TIA 126
Query: 167 TSSELMTELPKLKANTCNPLL------SRMTLHGILD----------STHPSGDLYRRYL 210
+ L +P + +P + + M I D STHP+
Sbjct: 127 SGLRLWRHIPGHGQDWIDPRMYIDHNDNEMIADEIRDYLDEDVPERHSTHPNA------- 179
Query: 211 VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ D+ L + +FDI+ A + CFT+ Y AE
Sbjct: 180 IPDQTLQKWGRLFDIILPSARRSCCFTRGYVRMAE 214
>gi|290997570|ref|XP_002681354.1| predicted protein [Naegleria gruberi]
gi|284094978|gb|EFC48610.1| predicted protein [Naegleria gruberi]
Length = 435
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF------------PRTNLRGRNIQSF---SIE 47
+++ + A DIN +AN++Y + F P + + + F S+E
Sbjct: 34 QVNGKKIKFNWIEAFDINENANTLYNNLFNHKPCAKDIVHIPIGDFQNHYFKLFKNSSLE 93
Query: 48 EINAMSPD------VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLL 101
+ + MSPPCQPFT G +KD D R + +L+ + + +
Sbjct: 94 QAKKKLKTEQTRKLMWTMSPPCQPFTLNGNRKDSEDDRSKSFLFLMADLFPQVLPDYIFV 153
Query: 102 ENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR----SPAAH 157
ENVK FE S++R + + L G++++E+L+ PTQ G+PN R RYYLI KR +P
Sbjct: 154 ENVKNFEISKTRQHLVNQLENFGYKYEEYLICPTQLGLPNQRVRYYLIGKRVANITPPLE 213
Query: 158 SSEASFCFETSSELMTELPKLKANTCNPLLSRM 190
+E E L+T+ PK PL ++
Sbjct: 214 KTEE--LREIPLHLITDPPKTILRDQEPLRPKI 244
>gi|390603836|gb|EIN13227.1| S-adenosyl-L-methionine-dependent methyltransferase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 346
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 46 IEEINAMSPDVILMSPPCQPFTRTGLQ-KDIADARCTALSYLIETIPAIPSL-------Q 97
+ I+ + L+SP CQP+T K D R + +L+ + +P L +
Sbjct: 15 LRNIDGQRIHLWLLSPACQPYTVLNPSAKGAQDPRAQSFLHLVTRV--LPQLAERNDHPR 72
Query: 98 CLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
CLL+ENV GFE S +R + L G+ +E LL+P QFGVPNSR RYYL+AK +
Sbjct: 73 CLLVENVAGFESSSTRTTLVDTLRNLGYETRELLLTPLQFGVPNSRLRYYLLAKLRTTSP 132
Query: 158 SSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPS-GDLYR---RYL--- 210
+ + S ++ +P L + +P S +G L P+ G RYL
Sbjct: 133 PPQIT----DHSAVLRHIPGLGEDWVDP-RSIDQNNGPLGEAQPAEGSKVHALCRYLNTD 187
Query: 211 ------VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ D+ L + +FDIV ++ + CFT+ YT E
Sbjct: 188 GMEACTIPDRVLQKWGRLFDIVLPSSTRSCCFTRGYTQLVE 228
>gi|219129968|ref|XP_002185148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403327|gb|EEC43280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 376
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 25/253 (9%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKD- 74
A+D + V++HN + I+ ++ +I D+ +MSPPCQP TR +D
Sbjct: 43 ALDHSDLCIEVFEHNHSLVIQKAVRIEKLTMNQIFEYRADIWMMSPPCQPHTRQHSNQDQ 102
Query: 75 -IADARCTALSYLIETIPAIPSL---QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEF 130
+ D R + +L + + +PS + + LENV GFE S+S ++L + + F
Sbjct: 103 ELEDPRSRSFLHLCDLLLELPSENLPKLIFLENVVGFESSQSCRKWNTILQSRQYIIKHF 162
Query: 131 LLSPTQFGVPNSRTRYYLIAKRSPAAH-SSEASFCFETSSELMTELPKLKANTCNPLLSR 189
L+PTQ GVPN R RY+ +A RS H S++ F ++ L+ T + L
Sbjct: 163 HLNPTQVGVPNDRPRYFCLAVRSTEIHDSNDNDLQFHVHAKTKMADSDLRPITPDTNLPN 222
Query: 190 MTLHGILDSTHPSGDLYRRYLVSDKDL--------------LRR--FHVFDIVNGKASST 233
+ + G+ DST + +L DKDL L+R FDIV ++ +
Sbjct: 223 LNIKGLRDSTVKVSSV-AEFL--DKDLTEHQKTSLRIPQSILQRNAAWCFDIVTPESLRS 279
Query: 234 NCFTKAYTHYAEG 246
CFT +Y + +G
Sbjct: 280 ACFTSSYGKFVKG 292
>gi|428177515|gb|EKX46394.1| hypothetical protein GUITHDRAFT_107597 [Guillardia theta CCMP2712]
Length = 355
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 14 VTAIDINTSANSVYKHNF-------PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
+ A D + N Y+ NF R +R + ++ +E++ D+ MSPPCQP+
Sbjct: 27 IVAYDTSLICNKTYELNFIHSPAPLNRCAVRAKLVEQLEVEDLEGF--DLWTMSPPCQPY 84
Query: 67 --TRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITSMLTRA 123
T+ Q+D D R L ++I+ + + + + +LLENVKGF GS+ ++ + +
Sbjct: 85 STTKAANQRDDLDPRSQGLHHIIKLLLDVKNPPKWILLENVKGFHGSKMQNKFLGAIEQR 144
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
GF +++FLL+P Q G+PN+R RY ++ +
Sbjct: 145 GFSWRQFLLNPIQVGIPNNRLRYDMLLR 172
>gi|145348417|ref|XP_001418645.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578875|gb|ABO96938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSF-----SIEEINAMSPDVIL-M 59
+L+ A+D + +AN+VY+ NF R N+ ++ + E D +L +
Sbjct: 62 TLKSAIAVDNSDAANAVYEANFADAPRRVNVEHLDLNALFASGNGDEGRQGRRNDYVLTV 121
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL-QCLLLENVKGFEGSRSRDLITS 118
SPPCQP+TR G D R + +I+ + AI + + + +ENV GFE S +R + +
Sbjct: 122 SPPCQPYTRRGKGLASEDPRARSFHAVIDQLRAIEHVPRRIFVENVVGFESSDTRRALLN 181
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L + +EF++SP G+P SR+RYYLIA
Sbjct: 182 ALGSRRYDVREFIVSPMALGIPYSRSRYYLIA 213
>gi|60098349|emb|CAH65005.1| hypothetical protein RCJMB04_1a16 [Gallus gallus]
Length = 102
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
EVV A+D+NT AN VYKHNFP T L + I+ +++E + +S D+ILMSPPCQPFTR+
Sbjct: 28 EVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGITLKEFDRLSFDMILMSPPCQPFTRS 85
>gi|353234718|emb|CCA66740.1| hypothetical protein PIIN_00421 [Piriformospora indica DSM 11827]
Length = 241
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 74/157 (47%), Gaps = 36/157 (22%)
Query: 99 LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
+L+ENV GFE S +R I +L G+ EFLL+P Q+G+PNSR RYYL+A+ P
Sbjct: 18 ILVENVAGFETSTTRTSINRLLHELGYHTTEFLLTPRQYGIPNSRLRYYLMARLIP---- 73
Query: 159 SEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYL-------- 210
T P L C P D+TH YL
Sbjct: 74 -------------FTVSPDLGILRCLP----------GDNTHYIPSTISDYLDKNIDPHT 110
Query: 211 -VSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+SD+ L R +FDIV ++++ CFT+ Y+H EG
Sbjct: 111 AISDRVLARWGRLFDIVYPSSTNSCCFTRGYSHLVEG 147
>gi|283834737|ref|ZP_06354478.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
gi|291068977|gb|EFE07086.1| modification methylase HgiDII [Citrobacter youngae ATCC 29220]
Length = 351
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD------VILMSPPC 63
++ ID + SA YK NFP T +I++ + +I + PD + PC
Sbjct: 21 GFDIALGIDFDKSAADSYKANFPNTAFINSDIRNVRVRDIAEIVPDWKENDLIFCACAPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD-----LITS 118
QPF+ ++D AD R + LS I A + + +ENV G + + + S
Sbjct: 81 QPFSSQNKKRDSADTRRSLLSETKRFIRAF-RPKYIFIENVPGIQSVKLTENGPFADFLS 139
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSELMT 173
LTR ++++ ++S +GVP R R ++AK P E F T + +
Sbjct: 140 FLTRFDYQYEYHVISSEFYGVPQQRKRLVVLAKLHGSPAFPTPTHGEQGKPFATVRDYIG 199
Query: 174 ELPKLKANTCNP 185
+LP+L+A +P
Sbjct: 200 QLPRLQAGEADP 211
>gi|429099380|ref|ZP_19161486.1| DNA-cytosine methyltransferase [Cronobacter dublinensis 582]
gi|426285720|emb|CCJ87599.1| DNA-cytosine methyltransferase [Cronobacter dublinensis 582]
Length = 352
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD------VILMSPPC 63
++ ID + SA + YK NFP+TN +I++ I ++ + P+ V PC
Sbjct: 21 GFDIALGIDFDESAEASYKANFPQTNFIRDDIRNIKIRDVAKLVPERDSAQLVFCACAPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSRSRD-----LIT 117
QPF+ +++ D R T L I A P+ + +ENV G + + +
Sbjct: 81 QPFSSQNKTRNVDDKRRTLLGETKRFIRAFRPAF--IFIENVPGIQSVKIAENGPFADFL 138
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSELM 172
+ R G+++ ++S +GVP R R ++AK PA F T + +
Sbjct: 139 HFIGRFGYQYDFKVVSSEFYGVPQQRKRLVVLAKLGGYPDFPAPTHGHEEKPFATVRDYI 198
Query: 173 TELPKLKANTCNP 185
+LP L+A C+P
Sbjct: 199 GDLPSLQAGECSP 211
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILM 59
L H E++ AI++++ A +K N P + + ++I FS EEI PD+IL
Sbjct: 18 LGFHMAGAEIIGAIEVDSWATETFKFNHPESLVIKKDISQFSDEEILETFKNNKPDIILG 77
Query: 60 SPPCQPFTRTGLQK-DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---- 114
PPCQ F+ + D D R + + I I S +++ENV ++++D
Sbjct: 78 GPPCQGFSIANKKNGDHKDPRNSLFEEFLR-IGRILSPMVMIMENVPNIIKAKTKDGIFV 136
Query: 115 --LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+I L+ G+ +L T FGVP R R ++IA R
Sbjct: 137 VDIIKEELSSLGYHVYHNILESTDFGVPQIRKRLFIIASR 176
>gi|334335721|ref|YP_004540873.1| DNA-cytosine methyltransferase [Isoptericola variabilis 225]
gi|334106089|gb|AEG42979.1| DNA-cytosine methyltransferase [Isoptericola variabilis 225]
Length = 494
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQS-----FSIEEINAMSPDVILMSPP 62
A E V A++I+ A VY+ N+ + RG N + S +E+N DV++ P
Sbjct: 24 AMGGECVYAVEIDAEARRVYEANWG-LSARGNNDKGDITLDTSGDEVNVPEHDVLVAGFP 82
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSR---SRDLITS 118
CQPF+++G QK + +AR T ++ + PS+ +LLENV+ G R ++I
Sbjct: 83 CQPFSKSGAQKGMEEARGTLFFDIMRVVEDRRPSI--VLLENVRNLAGPRHIHEWEVIIK 140
Query: 119 MLTRAGFR-------FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE 160
L +AG+R F +++P G P +R R ++ A R H S+
Sbjct: 141 TLRQAGYRVSHKAAIFSPAMIAPEFGGHPQTRERVFIAATRINPEHRSD 189
>gi|150026187|ref|YP_001297013.1| type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772728|emb|CAL44211.1| Probable type II modification methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 335
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++E V + N + Y N+P + G Q I E D++L PCQPF++
Sbjct: 30 NIECVFTSEWNKYSEQTYLANYPNEIVHGDITQ---ISETQIPEHDILLAGFPCQPFSQA 86
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFR 126
GL+K +D R T L + IE I Q LLENVK +G ++ I L G+
Sbjct: 87 GLKKGFSDTRGT-LFFDIERILIAKKPQAFLLENVKQLKGHDKGKTLATIIEHLKNIGYE 145
Query: 127 FQEF-LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
++ +L +FG+P +R R Y++ + F F T ++L T++ + +
Sbjct: 146 NVQYEVLKAKEFGLPQNRERIYIV-----GFLDNSIKFKFPTPTKLPTKVGDILEQKVD- 199
Query: 186 LLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAE 245
+ T+ L H +R +++K+ + F F IVN + TN + Y Y +
Sbjct: 200 --EKYTISDRLWEGH------QRRKIANKEKGKGFG-FGIVNENSEYTNTISARY--YKD 248
Query: 246 G 246
G
Sbjct: 249 G 249
>gi|260580130|ref|ZP_05847960.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
gi|260093414|gb|EEW77347.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus influenzae RdAW]
Length = 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
E+ A + A +YK+NF P N+ RN + ++E+I SPD+I+ PPCQ F+
Sbjct: 21 GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRN-EKEAVEKIKKYSPDLIMGGPPCQDFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G ++DI+ R L+Y I + ++ENV+ + S I + G+
Sbjct: 80 SAG-KRDISLGRAD-LTYSFANIVCNIRPKWFVMENVEQIKKSHILQDIINQFIDFGYGL 137
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
+L + GVP SRTR++LI K +SE +F T S +++ P
Sbjct: 138 TSAILDASYCGVPQSRTRFFLIGKL-----NSEHNFLIPTLSRKLSDKP 181
>gi|194386588|dbj|BAG61104.1| unnamed protein product [Homo sapiens]
Length = 310
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 73/225 (32%)
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
+ G Q D+ D+R + ++++ +P RDL+ + GF++
Sbjct: 25 KIGRQGDMTDSRTNSFLHILDILP---------------------RDLLIQTIENCGFQY 63
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA------- 180
QEFLLSPT G+PNSR RY+LIAK F+ +++ E PK+++
Sbjct: 64 QEFLLSPTSLGIPNSRLRYFLIAKL------QSEPLPFQAPGQVLMEFPKIESVHPQKYA 117
Query: 181 -NTCNPLLSR-----MTLHG---------ILDSTHPSGDLYRR----------------- 208
+ N + + ++ G IL + +++R+
Sbjct: 118 MDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLE 177
Query: 209 -------YLVSDKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
YL+ K LLR + DIV + CFTK Y Y EG
Sbjct: 178 DDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG 222
>gi|313667524|ref|YP_004047808.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
gi|422111278|ref|ZP_16380944.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|309378245|emb|CBX23130.1| DNA cytosine methyltransferase M.NlaX [Neisseria lactamica
Y92-1009]
gi|313004986|emb|CBN86414.1| cytosine-specific methyltransferase [Neisseria lactamica 020-06]
Length = 313
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SR 111
D++L PCQPF++ GL+K AD R T L + IE I Q LLENVK +G R
Sbjct: 66 DILLAGFPCQPFSQAGLKKGFADTRGT-LFFDIERILLAKKPQAFLLENVKQLKGHDKGR 124
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +I + L +AG++ +L FG+P +R R YL+
Sbjct: 125 TLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>gi|261400948|ref|ZP_05987073.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
gi|269209191|gb|EEZ75646.1| modification methylase EcoRII [Neisseria lactamica ATCC 23970]
Length = 313
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SR 111
D++L PCQPF++ GL+K AD R T L + IE I Q LLENVK +G R
Sbjct: 66 DILLAGFPCQPFSQAGLKKGFADTRGT-LFFDIERILLAKKPQAFLLENVKQLKGHDKGR 124
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +I + L +AG++ +L FG+P +R R YL+
Sbjct: 125 TLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>gi|268610192|ref|ZP_06143919.1| cytosine-specific DNA methylase [Ruminococcus flavefaciens FD-1]
Length = 475
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFP--RTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
E V A + N YK N+ +RG ++N + P DV+ PC
Sbjct: 81 ECVMAAETNQECVKTYKLNYKIDEKEVRG---------DVNKIDPETIAPFDVLCAGFPC 131
Query: 64 QPFTRTGLQKDIADARCTALSY-LIETIPAIPSLQCLLLENVKGF-EGSRSRDLITSMLT 121
QPF++ G QK D L Y +++ + P ++ ++LENV+ + + + D+IT+ LT
Sbjct: 132 QPFSKAGAQKGFKDETRGNLFYKIMDILDGHPEVKFIILENVRNLADKTENWDIITTELT 191
Query: 122 RAGFRFQE--FLLSPTQFGVPNSRTRYYLIAKR 152
+ F E +LSP+ FG+P R R Y++ R
Sbjct: 192 KRNFYITETPIILSPSDFGIPQIRERVYILGIR 224
>gi|339321014|ref|YP_004683536.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392430096|ref|YP_006471141.1| DNA-methyltransferase [Mycoplasma bovis HB0801]
gi|338227139|gb|AEI90201.1| cytosine-specific DNA methylase [Mycoplasma bovis Hubei-1]
gi|392051505|gb|AFM51880.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma bovis HB0801]
Length = 479
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E V A DI+ +YK N+ + +I S+E N DV+ PCQ F++ G
Sbjct: 28 ECVFASDIDIDCAKIYKKNYSIDSYS--DITKVSVE--NIPKHDVLCAGFPCQAFSKAGK 83
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR-- 126
Q I DAR T L Y I I + +LENV+ F + + ++ ++L G+R
Sbjct: 84 QAGINDARGT-LFYDIARILEHHKPKFFILENVRNFVSHDSGNTWAIVKNILRSLGYRLT 142
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPL 186
+ +LSP QFGVP R R Y++ + P + ELP L + + N +
Sbjct: 143 YSPLVLSPHQFGVPQFRERVYILGQYDPN----------NVDIPIEIELPNLLSKSDNTI 192
Query: 187 LSRMTLHGILDSTHPSGDLYRRYLVS 212
S + L +D ++YL+S
Sbjct: 193 DSILDLSEKID---------KKYLIS 209
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-----SPDVILMSPPCQ 64
E+V +DIN A + NFP + +I+ ++I M DVI+ PPCQ
Sbjct: 23 GFEIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKNDDIPFMFDLLGDIDVIVGGPPCQ 82
Query: 65 PFTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
F+ QK+I D R I + + + +L+ENV+G + +++ I +L
Sbjct: 83 GFSSANRWQKEIEDPRNKLFYEYIRFVEVLKP-KVVLIENVRGILTRDNGYAKNKIYEIL 141
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
R+G+ +L +++GVP R R + +A R
Sbjct: 142 QRSGYNVDSAVLDASEYGVPQKRLRAFFLATRQ 174
>gi|282899236|ref|ZP_06307209.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
gi|281195872|gb|EFA70796.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
Length = 422
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFT 67
E V + +I+ A YK NF PR ++R EI+ M D +L PCQPF+
Sbjct: 30 ECVLSSEIDKKAVETYKINFDDQPRGDIR----------EIDIMPEFDFMLAGFPCQPFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G Q+ D R T L + IE + + LLENV+G + R+ + I + L + G
Sbjct: 80 YAGKQQGFGDTRGT-LFFEIERLLTSYQPEAFLLENVRGLTTHDHGRTFNTIINSLEKLG 138
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ LL+ + FGVP +R R Y++
Sbjct: 139 YGIHYLLLNSSNFGVPQNRVRIYILG 164
>gi|16272974|ref|NP_439200.1| modification methylase [Haemophilus influenzae Rd KW20]
gi|1171050|sp|P45000.1|MTH5_HAEIN RecName: Full=Modification methylase HindV; Short=M.HindV; AltName:
Full=Cytosine-specific methyltransferase HindV
gi|1574073|gb|AAC22700.1| modification methylase [Haemophilus influenzae Rd KW20]
Length = 304
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
E+ A + A +YK+NF P N+ RN + ++E+I SPD+I+ PPCQ F+
Sbjct: 21 GFEICAAFENWEKAIEIYKNNFSHPIYNIDLRN-EKEAVEKIKKYSPDLIMGGPPCQDFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G ++DI+ R L+Y I + ++ENV+ + S I + G+
Sbjct: 80 SAG-KRDISLGRAD-LTYSFANIVCNIRPKWFVMENVEQIKKSHILQDIINQFIDFGYGL 137
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
+L + GVP SRTR+ LI K +SE +F T S +++ P
Sbjct: 138 TSAILDASYCGVPQSRTRFSLIGKL-----NSEHNFLIPTLSRKLSDKP 181
>gi|417844498|ref|ZP_12490540.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
gi|341956695|gb|EGT83114.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
Length = 306
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+++ V + +I+ A YK NF + G Q I+E D++L PCQPF++
Sbjct: 25 NVDCVFSSEIDKYAIQTYKTNFKDEFVFGDITQ---IDEKLVPDHDILLAGFPCQPFSQA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFR 126
GL+K +D R T L + IE I + LLENVK +G + +I L +AG++
Sbjct: 82 GLKKGFSDTRGT-LFFDIERILLEKKPKAFLLENVKQLKGHDKGNTLKVILEHLEKAGYK 140
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
+L FG+P +R R Y++
Sbjct: 141 VFYDVLRAKDFGIPQNRERIYIVG 164
>gi|254409526|ref|ZP_05023307.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183523|gb|EDX78506.1| DNA-cytosine methyltransferase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 437
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 9 FSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFT 67
+ E V A +I+ VYK+NF L I +IN + P DV+L PCQ F+
Sbjct: 29 YKTECVLASEISPDCQWVYKNNFNHEVLG-------DIRKINQLPPHDVLLAGFPCQSFS 81
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G + D R T ++ I + L+ ENV+G + R+ + I L G
Sbjct: 82 YAGKKAGFGDTRGTLFFEILRLIDTCKP-KALIFENVRGIYSHDRGRTLETIKHELKSRG 140
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ F FLL+ FG+P +R R Y++
Sbjct: 141 YSFDTFLLNSAHFGLPQNRVRLYMVG 166
>gi|30019096|ref|NP_830727.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
gi|29894639|gb|AAP07928.1| Type II restriction-modification system methylation subunit
[Bacillus cereus ATCC 14579]
Length = 373
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E++ A D++ A +YKHN + + G +I S EEI S DV+ PCQPF+
Sbjct: 38 GFEILWANDVDKHAVEIYKHNIGKI-VEG-DITKISEEEIP--SCDVLTAGFPCQPFSSA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG------FEGSRSRDLITSMLTR- 122
G +K + D R T I I A L +L ENV+G +GS D I S+L
Sbjct: 94 GNRKGVMDERGTLFEECIRVIKAKKPL-VVLFENVRGILTTKNLDGSLLLDSIVSILDEL 152
Query: 123 -AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ + LL + +GVP R R +A R
Sbjct: 153 DPGYNVEYKLLKASDYGVPQQRYRVIFVAFRK 184
>gi|229126345|ref|ZP_04255362.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
gi|228657116|gb|EEL12937.1| Cytosine-specific methyltransferase [Bacillus cereus BDRD-Cer4]
Length = 363
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E++ A D++ A +YKHN + + G +I S EEI S DV+ PCQPF+
Sbjct: 28 GFEILWANDVDKHAVEIYKHNIGKI-VEG-DITKISEEEIP--SCDVLTAGFPCQPFSSA 83
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG------FEGSRSRDLITSMLTR- 122
G +K + D R T I I A L +L ENV+G +GS D I S+L
Sbjct: 84 GNRKGVMDERGTLFEECIRVIKAKKPL-VVLFENVRGILTTKNLDGSLLLDSIVSILDEL 142
Query: 123 -AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ + LL + +GVP R R +A R
Sbjct: 143 DPGYNVEYKLLKASDYGVPQQRYRVIFVAFRK 174
>gi|127471|sp|P24581.1|MTNX_NEILA RecName: Full=Cytosine-specific methyltransferase NlaX;
Short=M.NlaX
gi|45004|emb|CAA38357.1| cytosine-specific methyltransferase of NlaIII [Neisseria lactamica]
Length = 313
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SR 111
D++ PCQPF++ GL+K AD R T L + IE I Q LLENVK +G R
Sbjct: 66 DILSAGFPCQPFSQAGLKKGFADTRGT-LFFDIERILLAKKPQAFLLENVKQLKGHDKGR 124
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +I + L +AG++ +L FG+P +R R YL+
Sbjct: 125 TLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>gi|319407456|emb|CBI81106.1| Cytosine-specific methyltransferase NlaX [Bartonella sp. 1-1C]
Length = 307
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 8 AFSLEVVTAI---DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
AF L I +I+ + YK NF + G +I EEI D++L PCQ
Sbjct: 21 AFGLNNTQCIFTSEIDKYSIQTYKLNFNNDYVHG-DITQIHEEEIPKH--DILLAGFPCQ 77
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLT 121
PF++ GL+K ADAR T L + I I + + LLENVK +G R+ I L
Sbjct: 78 PFSQAGLKKGFADARGT-LFFDINRILSHRKPRAFLLENVKQLKGHDKGRTLSRIVEHLQ 136
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+G++ +L FGVP +R R Y++
Sbjct: 137 LSGYKVFYDILKARDFGVPQNRERIYIVG 165
>gi|427400236|ref|ZP_18891474.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
gi|425720976|gb|EKU83891.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
Length = 328
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 15 TAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKD 74
A D + A + YK NFP T++ +++S + D++ PPCQPF+ G QK
Sbjct: 29 VAADFDAQACATYKRNFPDTDVHQGDVRSVDWTRLRGKI-DLVAGGPPCQPFSVAGNQKA 87
Query: 75 IADARCTALSYLIETIPAIPSL--QCLLLENVKGFEGSRSRDLIT---SMLTRAGFRFQE 129
D R L E + A+ + + +L+ENV G SR + ++++ G+ +
Sbjct: 88 ADDIR----DMLPEFVRAVAEIRPKLVLMENVAGLASSRHETYLNEKLAIISELGYEVEF 143
Query: 130 FLLSPTQFGVPNSRTRYYLIA 150
+L+ QFGVP R R +I
Sbjct: 144 KVLNSAQFGVPQERNRVIVIG 164
>gi|291530357|emb|CBK95942.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 317
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L ++V A +I+T A Y+ NFP+T L +I+ + E+ + D+I PC
Sbjct: 15 LGFEQVGFDIVWANEIDTDACKTYQFNFPKTKLIKSDIRKVNFSELEKI--DIITAGFPC 72
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGF---EGSRSRDLITS 118
QPF+ G K D R + E + A+ L Q + LENV G ++ ++I +
Sbjct: 73 QPFSVCGKGKGFFDERG---NLFFEIMRAVDILRPQIIFLENVANLTEHNGGKTFNVIHN 129
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
L + + + +G+P RTR Y++A R A
Sbjct: 130 ELVSRDYIIRYLIADACDYGIPQHRTRTYIVAFRDFA 166
>gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
Length = 360
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L H ++ TAI+I+ SA S Y+ NFP TN+ ++++ + + D+++ SPPC
Sbjct: 19 LGFHMAGWQITTAIEIDKSAVSTYRENFPSTNVIRSDVRAIDFTQFQGI--DLVVGSPPC 76
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFEGSRSR---DLITS 118
QPF+ +++ +R + E I A+ + + L+E + G + S+ I
Sbjct: 77 QPFSVPNQERNKQLSRAKPKDLVPEFIRAVRDIRPKAFLMETMPGLQRSKKNHYYQWIEQ 136
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP-------AAHSSEASFCFETSSEL 171
L + +L +G+P R R + + + H S + +S
Sbjct: 137 QLQTLDYSVYVEVLEAASYGIPQYRERLFFVGLATKNDFTFPRKTHGLGTSNPYISSGSA 196
Query: 172 MTELPKLKANTCN 184
+T++P + NT
Sbjct: 197 LTDVPDYEPNTTK 209
>gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
V+ A + + + YK N P T L R+I + + +E+ D I+ PPCQ ++
Sbjct: 23 GFNVIWANEFDKDIWATYKKNHPHTELDQRSITNITSDEVPEC--DGIIGGPPCQSWSEA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDL---ITSMLTRAGFR 126
G Q+ I D R I + A + L ENV G E +R +D I M AG+
Sbjct: 81 GAQRGINDKRGQLFFDFIRILEA-KKPKFFLAENVSGMEHARHKDALDNIKKMFKDAGYD 139
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+L+ +GV R R + RS
Sbjct: 140 LYYKMLNAVDYGVAQDRKRVIFVGFRS 166
>gi|386829306|ref|ZP_10116413.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
gi|386430190|gb|EIJ44018.1| DNA-methyltransferase Dcm [Beggiatoa alba B18LD]
Length = 383
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE---INAMSPDVILMSPPCQPF 66
+ A+DI+++ S YK+NFP T + ++ S +N + DV++ PPCQ F
Sbjct: 25 GFHTIAAVDIDSTLQSAYKYNFPNTYVINGDLSKMSHNSWSFLNNQNIDVVIGGPPCQGF 84
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
+R G+ D+ D R T ++ I I + ++ENV+G + +++ + R
Sbjct: 85 SRMGI-GDLNDPRRTLINDFFRHI-NILLPKFFVMENVEGLLDKKHFEVLNQAIESLNKR 142
Query: 127 FQ---EFLLSPTQFGVPNSRTRYYLIA 150
++ F+++ + FGVP R R ++I
Sbjct: 143 YRVLPPFIVNASDFGVPTKRKRVFVIG 169
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 31/198 (15%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----SPDVILMSPPCQPFT- 67
+V I+I+ A +N P T + R+IQ+ S EE ++ P+VI+ PPCQ F+
Sbjct: 28 LVGGIEIDQWAGETLAYNHPETQIVIRDIQTISDEEAISLFKYNKPNVIIGGPPCQGFSV 87
Query: 68 -RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR------DLITSML 120
R G + D D R T I +I +L+ENV +++ D+I L
Sbjct: 88 CRQG-RGDAKDPRNTLFQEFIR-FGSIFEPDLMLMENVPNLAKIKTKSDQAVIDIIKDEL 145
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR-------SPAAH--SSEASFCFETSSEL 171
+ G+ +L+ T +G+P +R R +++A + P+ H +S++ F +S L
Sbjct: 146 IKLGYHVDYSVLNATDYGIPQNRRRLFIVASKVKITHPFPPSTHTIASQSQLSFWENSLL 205
Query: 172 --------MTELPKLKAN 181
+++LP L+A
Sbjct: 206 PCPTLWDAISDLPILEAG 223
>gi|440682378|ref|YP_007157173.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679497|gb|AFZ58263.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 412
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF----SIEEINAMSPDVILMSPPC 63
FS+ + +++I+ A ++N P + +I++F S+++I PD+I+ PPC
Sbjct: 26 GFSIPI--SVEIDAWACDTLRYNQPEMTVIQNDIRNFNTLNSVKDICLYKPDIIIGGPPC 83
Query: 64 QPFTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLI 116
Q F+ G +KD D R T + I + + ++ENVKG EG + D+I
Sbjct: 84 QGFSIAGPAEKDPHDPRNTLFINFAKWISFLEP-KAFVMENVKGLLSRKNAEGVKVIDII 142
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G+ + +LL+ ++GVP R R +++ +
Sbjct: 143 KKTFEELGYFVEVWLLNSAEYGVPQIRERVFIVGNK 178
>gi|375261651|ref|YP_005020821.1| modification methylase [Klebsiella oxytoca KCTC 1686]
gi|365911129|gb|AEX06582.1| modification methylase [Klebsiella oxytoca KCTC 1686]
Length = 352
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD------VILMSPPC 63
EV ID + +A S YK NFP T +I++ ++++ + PD V PC
Sbjct: 21 GFEVALGIDFDENAASSYKANFPNTKFIRDDIRNVKVKDVAKLVPDLKSSELVFCACAPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSRSRD-----LIT 117
QPF+ ++ +D R T L I A P+ + +ENV G + + +
Sbjct: 81 QPFSSQNKIRNSSDKRRTLLGETKRFIRAFRPAF--IFIENVPGIQSIKIEENGPFSDFL 138
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSELM 172
+ ++R G+++ ++S +GVP R R ++A+ + P+ + F T + +
Sbjct: 139 NFISRFGYQYDYKVVSSEFYGVPQQRKRLVVLARLNDKPIFPSYSHGVDNIPFATVRDYI 198
Query: 173 TELPKLKAN 181
LPKL+A
Sbjct: 199 GSLPKLQAG 207
>gi|309807025|ref|ZP_07701007.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|308166645|gb|EFO68842.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
03V1-b]
Length = 336
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y+ NF T G +I ++E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYQMNFGDT--PGGDITQ--VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTIRVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ G+ FQ +L+P +G+P R R Y++ R+
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRN 173
>gi|365833197|ref|ZP_09374718.1| DNA (cytosine-5-)-methyltransferase [Coprobacillus sp. 3_3_56FAA]
gi|365258810|gb|EHM88814.1| DNA (cytosine-5-)-methyltransferase [Coprobacillus sp. 3_3_56FAA]
Length = 324
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLR--GRNIQSFSIEEINAMSP----DVILMSPPC 63
E V A +I+ A Y++NF NLR R+I I+ N + P DVIL PC
Sbjct: 23 GFETVYANEIDAKAVHTYENNF---NLRVDNRDIHEVVIDLENGIDPIGDIDVILAGFPC 79
Query: 64 QPFTRTGLQKDIADARCTA-LSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
Q F+ G ++ AD L + + I I + + + LENVK + R+ +I +
Sbjct: 80 QAFSIAGYREGFADHHGRGELFFEVMDIVRIKNPKVIFLENVKNLVSHDNGRTFQIIMAE 139
Query: 120 LTRAGFRFQEFLLSPTQFG-VPNSRTRYYLIAKRS 153
L AG+ + +L+ ++G VP +R R Y++A R
Sbjct: 140 LKNAGYHIKYKVLNSMEYGDVPQNRERIYIVAFRD 174
>gi|397623507|gb|EJK67022.1| hypothetical protein THAOC_11993 [Thalassiosira oceanica]
Length = 502
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 25/164 (15%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
S ++ A D + N V++HN R R I+ S++E+ V +SPPCQP
Sbjct: 108 SARLLAAFDHSDLCNGVFQHNHKDIGKRCKPRQTPIERLSLDELEQYDATVWCLSPPCQP 167
Query: 66 FTR--TGLQKDIADARCTALSYLIETI-----PAIPSLQCLLLENVKGFEGSRS------ 112
TR + ++ D R ++ +L + + +P+L LLLENV GFE + +
Sbjct: 168 HTRQHSNQHRERDDPRSSSFLHLCDLLIEMDEDMLPNL--LLLENVVGFEQNWAVADDCG 225
Query: 113 RD------LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
RD L +L + F L PT G+PN+R R+Y +A
Sbjct: 226 RDDMGSFTLWRKVLCDRQYETAHFHLDPTDVGIPNNRPRHYTVA 269
>gi|443313327|ref|ZP_21042939.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776732|gb|ELR87013.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 413
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFS----IEEINAMSPDVILMSPPCQPFTRTG- 70
+++I+ A ++N P N+ +I + I+EI ++ PD+I+ PPCQ F+ G
Sbjct: 32 SVEIDVWACDTLRYNRPNMNVVQHDICDINTNDRIKEICSIEPDIIIGGPPCQGFSIAGS 91
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLITSMLTRAG 124
QKD D R + + I + + ++ENVKG EG + ++I G
Sbjct: 92 AQKDPKDPRNSLFLNFAQWINCLRP-KAFIMENVKGLLSRKNTEGEKVINIIKKTFEEIG 150
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + +LL+ ++GVP R R +++
Sbjct: 151 YFVEIWLLNSAEYGVPQIRERVFIVG 176
>gi|167751358|ref|ZP_02423485.1| hypothetical protein EUBSIR_02344 [Eubacterium siraeum DSM 15702]
gi|167655604|gb|EDR99733.1| DNA (cytosine-5-)-methyltransferase [Eubacterium siraeum DSM 15702]
Length = 316
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ A DIN +A Y++NFP NL +I+S + + DV+ PCQPF+
Sbjct: 21 GFRAIWANDINKNACKTYRYNFPNVNLYECDIRSLDPSILQPV--DVLTAGFPCQPFSVC 78
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G +K AD R L + I + + ENV + R+ ++I + L +
Sbjct: 79 GQKKGFADERGN-LFFEIMRFADVLQPPIIFFENVANLTEHDNGRTFNVIHNELVSRDYA 137
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ + +G+P RTR Y++A +S A SF F EL L
Sbjct: 138 IRYLIADACDYGIPQHRTRTYIVAFKSQKACD---SFRFPEKCELQKHL 183
>gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus
parasuis 29755]
gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase
[Haemophilus parasuis SH0165]
gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus
parasuis 29755]
gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase
[Haemophilus parasuis SH0165]
Length = 320
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
EVV A DIN A KHNFP T + +I +++ DV+L PCQ F+ G
Sbjct: 37 FEVVWANDINEKACKTLKHNFPETPVVCGDIT--LVDKSTLPEADVVLGGFPCQDFSLAG 94
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG---FEGSRSRDLITSMLTRAGFRF 127
++ +A R +++ + + + L ENVKG ++ + + I + G++
Sbjct: 95 KRQGLAVERGNLYLSMVDVVDKVKP-KLFLAENVKGLLTWQNGLAINTIVEDFGKIGYKI 153
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
+ LL+ +GVP +R R ++ R+ +SE F ET S+
Sbjct: 154 KYQLLNTANYGVPQTRERVIIVGVRNDL--TSEFFFPRETHSD 194
>gi|349611852|ref|ZP_08891082.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
gi|348608317|gb|EGY58302.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
Length = 336
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q I+E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---IDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDVERES 179
>gi|326797283|ref|YP_004315103.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
gi|326548047|gb|ADZ93267.1| DNA-cytosine methyltransferase [Marinomonas mediterranea MMB-1]
Length = 378
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNI----QSFSIEEINAMSPDVILMSPPCQP 65
+ V A+DI+ + S Y+ NFP TN+ ++ + F E +N + D ++ PPCQ
Sbjct: 25 GFQTVAAVDIDETLQSAYRLNFPETNVLTADLAKTGRKFWSEHLNGLQVDGVIGGPPCQG 84
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTR 122
++R G D+ D R T L + + I + ++ENV+G ++R DL +L +
Sbjct: 85 YSRMG-TSDVDDPRRTLLGHFFRNVNIIKP-KFFIMENVEGLLDEKNRSELDLALQILHK 142
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+L + G P R R +I
Sbjct: 143 KYTILPPVVLDASDCGAPTKRRRVIVIG 170
>gi|359403347|ref|ZP_09196253.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|438120350|ref|ZP_20871945.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
gi|358832410|gb|EHK51684.1| cytosine-specific DNA modification methyltransferase [Spiroplasma
melliferum KC3]
gi|434155144|gb|ELL44119.1| DNA-methyltransferase [Spiroplasma melliferum IPMB4A]
Length = 404
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS-PDVILMSP--PCQPFTR 68
E++ A DI+ VY +NF L I+EI+ + PD L+ PCQPF++
Sbjct: 27 ELIFACDIDQYCREVYLNNFNNKILG-------DIKEIDENTIPDFDLLCAGFPCQPFSK 79
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGF 125
G QK D R ++ + A + LLLENV + + +IT LTR G+
Sbjct: 80 GGFQKGFNDTRGALFFEIVRILQAKKPI-FLLLENVSNLVSHDNGNTYRVITEELTRLGY 138
Query: 126 RF--QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA 180
F + +L+PT G+P R R Y+ R ++S+ E + +M E+ + K
Sbjct: 139 IFPSKPLVLTPTDIGIPMHRKRIYIPGIRKDLSNSN----GIEMFNSIMKEVKETKV 191
>gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 414
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMSPPCQPFTR 68
V +++I+T A ++N P + + +I +FS E I PD+I+ PPCQ F+
Sbjct: 30 VPLSVEIDTWACDTLRYNRPDSTVIQNDIGNFSTENDVKNICNFKPDIIIGGPPCQGFSI 89
Query: 69 TG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLITSMLT 121
G QKD D R + I + + ++ENVKG EG + D+I
Sbjct: 90 AGPAQKDPKDPRNGLFINFAQWIKFLEP-KAFVMENVKGLLSRKNAEGFKVIDIIKKTFE 148
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G+ + ++L+ ++G+P R R +++ +
Sbjct: 149 ELGYFVEVWVLNAAEYGIPQIRERIFIVGNK 179
>gi|427717809|ref|YP_007065803.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350245|gb|AFY32969.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 413
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS----IEEINAMSPDVILMSPPCQPFTR 68
V +++ + A ++N P + ++I+ FS I++I PD+++ PPCQ F+
Sbjct: 29 VPLSVETDAWACDTLRYNRPNMTVIQQDIRDFSTASSIKDICLFKPDIVIGGPPCQGFSI 88
Query: 69 TG-LQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKG------FEGSRSRDLITSM 119
G QKD D R S I I LQ ++ENVKG FEG + D+I
Sbjct: 89 AGPAQKDPKDPRN---SLFINFAHWICFLQPRAFVIENVKGLLSRKNFEGIKVIDIIQKT 145
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G+ + +LL+ ++GVP R R +++ +
Sbjct: 146 FEDLGYFVEVWLLNAAEYGVPQIRERIFVVGNK 178
>gi|331677320|ref|ZP_08377999.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
gi|331075055|gb|EGI46371.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli H591]
Length = 415
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
S + V + +I+ A YK NF + +I I+E S DV+L PCQ F+
Sbjct: 26 GLSTKCVKSSEIDKKACETYKLNFDEESYC--DIHDVDIDE----SFDVLLAGFPCQAFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G Q AD R T L + +E I + LLENV+G + R+ I L G
Sbjct: 80 YAGKQLGFADTRGT-LFFEVERIIKKNKPKLCLLENVRGLTSHDKGRTFSTILKSLHNLG 138
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + LL+ + FGVP +R R Y+IA
Sbjct: 139 YHVEYRLLNTSNFGVPQNRVRIYIIA 164
>gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
Length = 198
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFSVLNPINYGIPQKRERVYMVCFRNDIERES 179
>gi|404379848|ref|ZP_10984897.1| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
gi|404294517|gb|EFG32046.2| DNA (cytosine-5-)-methyltransferase [Simonsiella muelleri ATCC
29453]
Length = 339
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFT 67
+E V + +I+ A Y N+ I I +I A + D+IL PCQ F+
Sbjct: 49 IEFVFSSEIDKFARQTYAANY-------HEIPYGDITQIQAHEVPTHDIILAGFPCQAFS 101
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM---LTRAG 124
GL+K AD R T L + + I + L LENVKGF+ + ++ L + G
Sbjct: 102 VAGLRKGFADTRGT-LFFDVARIAEYHKPKILFLENVKGFKNHDKGNTFATVKLTLEQLG 160
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+R +L+ FGVP +R R Y++A R+
Sbjct: 161 YRVYADVLNAKNFGVPQNRERIYIVAIRN 189
>gi|325912401|ref|ZP_08174796.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
gi|325475743|gb|EGC78914.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII
143-D]
Length = 336
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y+ NF T G Q ++E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDRFAQETYQMNFGDTP-EGDITQ---VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIKRES 179
>gi|432395094|ref|ZP_19637896.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
gi|430912198|gb|ELC33430.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE21]
Length = 415
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
S + V + +I+ A YK NF + +I I+E S DV+L PCQ F+
Sbjct: 26 GLSTKCVKSSEIDKKACETYKLNFDEESYC--DIHDVDIDE----SFDVLLAGFPCQAFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G Q AD R T L + +E I + LLENV+G + R+ I L G
Sbjct: 80 YAGKQLGFADTRGT-LFFEVERIIKKNKPKLCLLENVRGLTSHDKGRTFSTILKSLHDLG 138
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + LL+ + FGVP +R R Y+IA
Sbjct: 139 YHVEYRLLNTSNFGVPQNRVRIYIIA 164
>gi|188588765|ref|YP_001921868.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|188499046|gb|ACD52182.1| DNA-cytosine methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
Length = 304
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
+ N F E+V A D A VY NF P N+ +NI IE + ++PDVI+ P
Sbjct: 17 MQNAGF--EIVAAYDNWEPAIKVYDENFNHPIYNIDLQNISLEEIESMKKLNPDVIIGGP 74
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT 121
PCQ ++ G ++D R + I I Q ++ENV + + +
Sbjct: 75 PCQDYSSAG-KRDENGGRADLTISFAKIINQIRP-QYFIMENVNDIKKYTTLKNAKQIFE 132
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
++G+ E +L + + VP +R RY+L+ +
Sbjct: 133 KSGYGLTEVVLDASLYEVPQARKRYFLVGE 162
>gi|329920363|ref|ZP_08277095.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
gi|328936039|gb|EGG32492.1| modification methylase HhaI [Lactobacillus iners SPIN 1401G]
Length = 336
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDVERES 179
>gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1]
gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
Length = 336
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y+ NF T G Q ++E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYQMNFGDTP-EGDITQ---VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTIRVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIERES 179
>gi|293363234|ref|ZP_06610118.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2]
gi|292553093|gb|EFF41842.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma alligatoris A21JP2]
Length = 428
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
+ L + E V +I A YK+NF +N+ G +I +E+I D +L
Sbjct: 31 QALKDKKIKSECVFTSEIKKHAIKAYKNNFKDSNING-DISKIDLEKIPYF--DYLLAGF 87
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLIT 117
PCQPF+ G D R T L + IE I +LENV+G +G R ++
Sbjct: 88 PCQPFSSAGKMLGFLDTRGT-LFFEIEKILKNKKPLGFILENVEGLISHNKGQTLRTILN 146
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK 177
S L+ G++ +L+ FG+ +R R Y+I + H + +F + S+ + ++ +
Sbjct: 147 S-LSNLGYKVTYSVLNSADFGLAQNRKRVYIIGTKDKTVHLN--NFVKKQSN--VKDIQE 201
Query: 178 LKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDI 225
T + S+ L + + D+Y + + + + H +D+
Sbjct: 202 DNLETIKSIFSKQLL-----KKYKTKDIYGKSITDKRGGINNIHSWDL 244
>gi|389799451|ref|ZP_10202440.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
gi|388442639|gb|EIL98823.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
Length = 351
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
++ +++N A Y + +++ S E+ ++ D+++ PPCQPF+ GL+
Sbjct: 24 ILANVELNRDAMDTYASHDSEATHYNVDVREISFEKFRGIA-DIVVGGPPCQPFSIGGLR 82
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQE 129
K AD R ++ + PS ++ENV G R+R D S L+ GFR
Sbjct: 83 KAQADKRDMIPEFIRCLKESQPS--AFIMENVPGLIQKRTRPYFDWALSQLSACGFRLNW 140
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRS 153
+L+ +G+P R R +++ R+
Sbjct: 141 AVLNSADYGIPQKRKRLFVLGSRN 164
>gi|322376119|ref|ZP_08050628.1| DNA modification methylase [Streptococcus sp. C300]
gi|321278887|gb|EFX55931.1| DNA modification methylase [Streptococcus sp. C300]
Length = 406
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ +L+ +G +P +R R Y++ + A+ SF F +L T L
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD---SFEFPEEIKLTTSL 199
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTRT 69
V AI+++ A ++ NFPRT + R+IQ S EEI + P V++ PPCQ F+ +
Sbjct: 42 VTHAIEVDKWAAETFEVNFPRTKVVTRDIQQISDEEIKDIIDERPLVVIGGPPCQGFSHS 101
Query: 70 GL-QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLITSMLTR 122
+ KD D R + + + + C ++ENVKG +G D+I
Sbjct: 102 NVNNKDPKDPRNSLFQEYMRFVAQLRPKVC-MIENVKGLLTTKTAKGELVIDIILREFES 160
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ +L+ FGVP R R + A
Sbjct: 161 LGYNADFRVLNAANFGVPQFRERLIIAA 188
>gi|309803758|ref|ZP_07697844.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|308164167|gb|EFO66428.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
11V1-d]
Length = 336
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E + D++ P
Sbjct: 25 RLALESFGAQCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ G+ FQ +L+P +G+P R R Y++ R+
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRN 173
>gi|429759466|ref|ZP_19291965.1| DNA (cytosine-5-)-methyltransferase [Veillonella atypica KON]
gi|429179742|gb|EKY20981.1| DNA (cytosine-5-)-methyltransferase [Veillonella atypica KON]
Length = 411
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + +AN YK NFP L R+I S +I DVI+ PCQ F+ G +
Sbjct: 33 VVYANEFDKNANITYKLNFPDIQLDNRDIHIVSSSDIKTEKIDVIVGGFPCQAFSIAGYR 92
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK ++ +I LT G+ +
Sbjct: 93 KGFEDDRGDLFFELLRIIKE-KKPKAVFIENVKNMVSHNHGKTFKVIKEALTLNGYYIKW 151
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+L+ +G +P +R R Y++ +A+ +F F L T L +
Sbjct: 152 KVLNGKDYGNIPQNRERIYIVGFLEKSAYD---AFIFPDEIPLTTSLSDI 198
>gi|294949213|ref|XP_002786099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900227|gb|EER17895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 125
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSF-SIEEINAMSPDVILMSPPCQPFTRTGLQ 72
+TA+D+NT +N VY ++ + + +NI S S++ ++M+ D+ +SPPCQP+TR G Q
Sbjct: 33 ITAVDVNTESNKVYARSYGDSPI-AKNIASAGSVKWFDSMAADMWTLSPPCQPYTRQGKQ 91
Query: 73 KDIADARCTALSYLIE 88
+D D R TAL + +
Sbjct: 92 QDSEDCRATALGRITQ 107
>gi|293395454|ref|ZP_06639738.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
gi|291422138|gb|EFE95383.1| modification methylase HgiDII [Serratia odorifera DSM 4582]
Length = 354
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAM---SPDVILMS--PPC 63
+VV ID++ A+ YK NFP + +I++ ++E + N++ S D +L+S PC
Sbjct: 21 GFDVVLGIDVDQQASETYKANFPDADFIFDDIRNVTVERVANSIAFKSADGLLLSACAPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFE---GSRSRDL--I 116
QPF++ K+ D R + L ET + L + + LENV G + GS+
Sbjct: 81 QPFSQQNKYKNKDDER---ICLLDETHRFVSRLLPEYIFLENVPGIQKIDGSKESPFTRF 137
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETS-----SEL 171
S+L + + + F+ + ++GVP R R+ L+A E + E S E
Sbjct: 138 ISLLDKLNYHYVYFVANAEKYGVPQRRKRFVLLASLLGPISIPEPTHDIENSPVKTVREF 197
Query: 172 MTELPKLKANTCN 184
+ E PKL + +
Sbjct: 198 IGEYPKLASGEVD 210
>gi|443477276|ref|ZP_21067135.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443017642|gb|ELS32040.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
+E V + +I+ A Y+ NF + +I EI A D++L PCQPF+ G
Sbjct: 48 VEFVFSSEIDKYARITYESNF--GDCPHGDITKIPPHEIPAF--DILLAGFPCQPFSHAG 103
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRAGFRF 127
L+K D R T L + I I + + LENVKGF+ + ++ L G++
Sbjct: 104 LKKGFDDTRGT-LFFDIAKIIEFHRPEVVFLENVKGFKNHDKGNTFAVVKRTLNNLGYKV 162
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
+L+ FGVP +R R Y+IA
Sbjct: 163 FAEVLNAKNFGVPQNRERIYIIA 185
>gi|303231468|ref|ZP_07318199.1| modification methylase HhaI family protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302513905|gb|EFL55916.1| modification methylase HhaI family protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 411
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + +AN YK NFP L R+I S +I DVI+ PCQ F+ G +
Sbjct: 33 VVYANEFDKNANITYKLNFPDIQLDNRDIHIVSSSDIKTEKIDVIVGGFPCQAFSIAGYR 92
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK ++ +I LT G+ +
Sbjct: 93 KGFEDDRGDLFFELLRIIKE-KKPKAVFIENVKNMVSHNHGKTFKVIKEALTLNGYYIKW 151
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+L+ +G +P +R R Y++ +A+ +F F L T L +
Sbjct: 152 KVLNGKDYGNIPQNRERIYIVGFLEKSAYD---AFIFPDEIPLTTSLSDI 198
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-----SPDVILMSPPCQ 64
+++ +D N A + NF + +IQ +EI M DVI+ PPCQ
Sbjct: 23 GFDILGGLDFNPDAVETFHQNFLNSRAICADIQEIKNDEITYMFDLTGDIDVIVGGPPCQ 82
Query: 65 PFTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
F+ QK++AD R I + + +L+ENV+G + +R I S+L
Sbjct: 83 GFSSANRWQKEMADPRNKLFYEYIRFVEVFMP-KVVLIENVRGILTRDNGYARKKIYSIL 141
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G+ +L ++FGVP R R + IA R
Sbjct: 142 ENLGYIVDSAVLDASEFGVPQKRLRAFFIATR 173
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM--SPDVILMSPPCQPFT 67
++ + AI+++ A+ ++ NFP NI + EI + D+I PPCQ F+
Sbjct: 22 GIKTIGAIELDRFASETFRKNFPEIPHYQANITEYGDSEIIKLFKGVDIITGGPPCQGFS 81
Query: 68 RTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR------SRDLITSML 120
G Q I D R + + +I ++LENVKG + + D + +
Sbjct: 82 VAGPSQYGIIDNRNNLIMEMYR-FASILKPNLVILENVKGILNGKLSPTKKALDEYMNNM 140
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA-------AHSSEASFCFETSSELMT 173
+ G++ + F+L+ + FGVP R R ++IA R+ A ++ T E +
Sbjct: 141 SNIGYKIKVFVLNTSDFGVPQGRQRVFVIAARNEAFIPLEIIGEYTQGKKAKRTVGEALE 200
Query: 174 ELP 176
+LP
Sbjct: 201 DLP 203
>gi|312872570|ref|ZP_07732638.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
gi|311091932|gb|EFQ50308.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2062A-h1]
Length = 336
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E + D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETSIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIERES 179
>gi|428215157|ref|YP_007088301.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428003538|gb|AFY84381.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 418
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILM 59
AE+L A V + +I + VY+ NF G + Q I + + P DV+L
Sbjct: 24 AEKL---ALKTHCVLSCEIKADSGWVYQQNF------GESPQG-DIRILEKLPPHDVLLA 73
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G + D R T +I + S Q L ENV+G +G + +I
Sbjct: 74 GFPCQSFSAAGKKAGFGDTRGTLFFEIIRLMDTSQS-QAFLFENVRGLLTNDGGNTIKMI 132
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L G+ F F+L+ FG+P +R R YL+
Sbjct: 133 QHQLEARGYSFDIFVLNSANFGLPQNRLRVYLLG 166
>gi|262280408|ref|ZP_06058192.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258186|gb|EEY76920.1| DNA cytosine methyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 354
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDV--------ILMSP 61
L++ +D + A+ Y+ NFP +I+ +E+ A D+ ++
Sbjct: 21 GLDIAIGLDFDKKASETYEANFPEAKFYNVDIRELDEKELAAAFKDINQKEEPLLLVACA 80
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF-------EGSRS 112
PCQPF+ K D R T L ET I LQ + +ENV G EG
Sbjct: 81 PCQPFSSQNKAKSEDDIRRTLLD---ETHRFINELQPDYIFIENVPGLQNIDKDKEGPYK 137
Query: 113 RDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR-----SPAAHSSEASFCFET 167
R L ++F EF+ ++GVP R R+ L+A + PA E T
Sbjct: 138 R--FIQFLNMQNYKFIEFIAKSEEYGVPQRRKRFVLLASKIGQLEIPAKTHGEGLSPIPT 195
Query: 168 SSELMTELPKLKANTCNP 185
+ + P +KA +P
Sbjct: 196 VKDFIGGFPVIKAGEIHP 213
>gi|428776054|ref|YP_007167841.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690333|gb|AFZ43627.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 333
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
A ++E V + +I+ A Y+ NF P+ +L +I ++ D++L PCQ
Sbjct: 42 ANNIEFVFSSEIDRFARMTYQANFSEEPQGDLT-------TISPLDIPPFDILLAGFPCQ 94
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
PF+ GL+K DAR T L + I I + + LENVK F + + ++ ++
Sbjct: 95 PFSNAGLKKGFEDARGT-LFFDIAKIIEAHQPEIIFLENVKNFRTHDQGNTFKVVKEIME 153
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+ G++ + + FGVP +R R Y++A + H
Sbjct: 154 KLGYQVYAQVFNAKHFGVPQNRERIYIVAFSDQSIH 189
>gi|319639602|ref|ZP_07994349.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399173|gb|EFV79847.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 327
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
E+V A+D + A Y NF + +I++ +I+E++ D++L PCQ F+
Sbjct: 37 FEIVYALDFDKFAVQTYNANFEHPAI-CDDIKNLNIQELDDF--DLLLGGFPCQSFSTVN 93
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFRF 127
KD DAR L++ + + + ENVKG + ++ +LT +AG+
Sbjct: 94 PSKDTNDARANLYKELVKVL-QTKQPKYFIFENVKGLMTLQKGKILQKVLTEFKQAGYEV 152
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
Q LL FG+P R R +++ R +F ET +E
Sbjct: 153 QYKLLLAANFGIPQKRERVFMVGVRKDI--QKHYTFPMETHAE 193
>gi|309809622|ref|ZP_07703479.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
gi|308170103|gb|EFO72139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners SPIN
2503V10-D]
Length = 336
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIERES 179
>gi|428317977|ref|YP_007115859.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241657|gb|AFZ07443.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 439
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP-PCQPFTRTG 70
E V + +IN A VY+ NF T L I I+ + IL++ PCQ F+ G
Sbjct: 43 ECVLSSEINPDAQLVYQKNFADTPLG-------DIRLIDKLPEHEILLAGFPCQSFSYAG 95
Query: 71 LQKDIADARCT---ALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
++ D R T ++ LI+T Q + ENV+G +G R+ + I + G
Sbjct: 96 KKEGFGDTRGTLFFEIARLIDTFKP----QAFIFENVRGLVSHDGGRTLETIKGEIKSRG 151
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ F FLL+ + F +P +R R YL+
Sbjct: 152 YSFDYFLLNSSNFSLPQNRVRVYLVG 177
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAMSPD--VILMSPPCQPFTRTGLQ 72
A++ N+S Y+ NFP + + +I + +I+ + ++ D +I+ PPCQ F++ G +
Sbjct: 30 AVEFNSSIAKGYEENFPHSKIINEDINTVNIKSVFGNLNGDKTIIIGGPPCQGFSQKGKR 89
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
+ D R IE + I + ++ENV G EG + I L G+ E
Sbjct: 90 IGLNDERNFLFLKYIECVEVINPI-AFVIENVPGLLTNEGGFFLNEIIEKLQGLGYSLFE 148
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETS-------SELMTELPKLKAN 181
+L+ + +GVP +R R +++ R + A+F + T ++ +++LP LK+
Sbjct: 149 RVLNASDYGVPQNRKRAFIVGLR-----TENATFTWPTEFGKKVTINDAISDLPILKSG 202
>gi|169794286|ref|YP_001712079.1| cytosine-specific methyltransferase [Acinetobacter baumannii AYE]
gi|213159140|ref|YP_002321138.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|215481844|ref|YP_002324026.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332850048|ref|ZP_08432435.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332871527|ref|ZP_08440021.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|417575262|ref|ZP_12226115.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|421623462|ref|ZP_16064347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|421641908|ref|ZP_16082439.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|421647936|ref|ZP_16088347.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|421657072|ref|ZP_16097353.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|421698463|ref|ZP_16138005.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|421795872|ref|ZP_16231947.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|421799550|ref|ZP_16235541.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
gi|169147213|emb|CAM85072.1| putative cytosine-specific methyltransferase [Acinetobacter
baumannii AYE]
gi|213058300|gb|ACJ43202.1| DNA cytosine methyltransferase [Acinetobacter baumannii AB0057]
gi|213986404|gb|ACJ56703.1| Modification methylase HgiDII(Cytosine-specificmethyltransferase
HgiDII) [Acinetobacter baumannii AB307-0294]
gi|332730897|gb|EGJ62203.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013150]
gi|332731381|gb|EGJ62673.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
6013113]
gi|400205995|gb|EJO36975.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC-5]
gi|404572763|gb|EKA77805.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii IS-58]
gi|408514660|gb|EKK16266.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-235]
gi|408516130|gb|EKK17709.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
IS-251]
gi|408693248|gb|EKL38858.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
OIFC074]
gi|408714638|gb|EKL59778.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-83]
gi|410401023|gb|EKP53185.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii
Naval-21]
gi|410409572|gb|EKP61500.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter baumannii Canada
BC1]
Length = 355
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI--------NAMSPDVILMSP 61
L++ +D + A Y+ NFP +I+ +E+ P + +
Sbjct: 21 GLDITIGLDFDIKAAETYQANFPEALFYNVDIRELDEKELAKAFKEKNREKEPLLFVACA 80
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFEG-SRSRD---- 114
PCQPF+ K D R T L ET I L + +L+ENV G + + +D
Sbjct: 81 PCQPFSTQNKSKSEDDIRRTLLD---ETHRFISKLKPEYILVENVPGLQKIDKEKDGPYK 137
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSS 169
+ L ++ EF+ ++GVP R R+ L+A +S PA E +T
Sbjct: 138 RFITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASKSGKIEIPAKTHGEGLEPIKTVR 197
Query: 170 ELMTELPKLKANTCNP 185
+ + E P +KA +P
Sbjct: 198 DFIGEFPAIKAGEIHP 213
>gi|325912423|ref|ZP_08174818.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
gi|325475765|gb|EGC78936.1| modification methylase HhaI [Lactobacillus iners UPII 143-D]
Length = 314
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 9 FSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
F + V + + + A YK NF P ++ I+E N D++ PCQ
Sbjct: 10 FGAQCVYSSEWDKYAQETYKMNFGDVPEGDIT-------QIDEKNIPDHDILCAGFPCQA 62
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTR 122
F+ +G Q+ D+R T L + + I + LENVK F +G ++ +++ + +
Sbjct: 63 FSISGKQQGFEDSRGT-LFFDVARIVKEKRPIVVFLENVKTFATHDGGKTLNVVINTMNE 121
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ FQ +L+P +GVP R R Y++ R+
Sbjct: 122 LGYSFQYSVLNPVDYGVPQKRERIYMLCFRN 152
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIE---EINAMSPD---VILMSPPCQPF 66
V+ DI +A ++ PR I+ +IE E+ + P V+ PPCQ +
Sbjct: 26 VLAGNDIFDAAGKTFEATHPRAKFIPGPIEDLTIEHLLEVTGLKPGELTVLAGGPPCQAY 85
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
+ Q+ + D R T + + + + +++ENV G G + I S L
Sbjct: 86 SVYNHQRGMHDERATLFKEYLRIVDGL-RPEWIVMENVTGIYSIGGGEAVAAIKSELAAL 144
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKR-------SPAAHSSEASFCFETSSELMTELP 176
G+ +E +L ++GVP R R I R H S F T + + +LP
Sbjct: 145 GYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVPISHPEPTHGPGRSMPFVTIKDAIGDLP 204
Query: 177 KLKANTCNP 185
L+ P
Sbjct: 205 ALENGEAKP 213
>gi|309804726|ref|ZP_07698791.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|312871535|ref|ZP_07731628.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325913106|ref|ZP_08175476.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
gi|308166118|gb|EFO68336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|311092930|gb|EFQ51281.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
3008A-a]
gi|325477527|gb|EGC80669.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners UPII 60-B]
Length = 336
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTISVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ G+ FQ +L+P +G+P R R Y++ R+
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRN 173
>gi|315653956|ref|ZP_07906872.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
gi|315488652|gb|EFU78298.1| modification methylase EcoRII [Lactobacillus iners ATCC 55195]
Length = 336
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTIRVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIKRES 179
>gi|419799142|ref|ZP_14324510.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
gi|385698682|gb|EIG29029.1| putative DNA (cytosine-5-)-methyltransferase [Streptococcus
parasanguinis F0449]
Length = 406
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N+P T+L R+I + EEI A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYRLNYPNTHLDSRDIHAVQPEEIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+ +L+ +G +P +R R Y++ + A+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD 185
>gi|334120434|ref|ZP_08494514.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333456412|gb|EGK85044.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 330
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAMSPDVILMSPPCQPFTRTGLQ 72
V A + + S Y+ N P T L R+I+ + +EI N + I+ PPCQ ++ G +
Sbjct: 29 VWANEYDKSIWDTYEFNHPETILDRRDIRKINSDEIPNCIG---IIGGPPCQSWSEAGAK 85
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGFRFQE 129
+ I D+R I + + L ENV G R+++ T +L++ G+R
Sbjct: 86 RGIDDSRGQLFWEYIRIVRDKQPV-FFLAENVSGILAPRNKEAFTYILSQFEEIGYRVSY 144
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
LL+ FGVP R R ++ R E E ++++T LK + +
Sbjct: 145 KLLNAKNFGVPQDRQRVIVVGYRETLGFGFEFP---EPGADVLT----LKDAIFDLQAAP 197
Query: 190 MTLHGILDSTHPS 202
M++ G LD+ H S
Sbjct: 198 MSVKGKLDNYHDS 210
>gi|357412178|ref|YP_004923914.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320009547|gb|ADW04397.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 431
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-----SPDVILMSPPCQ 64
E A++++ +A K N P ++R ++ SI + +PD+I PC
Sbjct: 24 GFEHAVAVELDPTAAQTLKRNMPGCDVRTGDVADRSIWDPEQFCAEHGTPDLIAGGVPCP 83
Query: 65 PFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITS 118
PFT G Q AD R A+ P + LLLENV+G +R R +
Sbjct: 84 PFTIAGKQLGAADERDLFAWAVGLAERVRP-----KALLLENVRGLSANRFAAYRQNVLD 138
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
L AG+ Q L FGVP R R+ L+A + E + F L E PK+
Sbjct: 139 TLQDAGYVAQWELFHAADFGVPQLRPRFVLVALQ------REYAPYFSWPKPLEGERPKV 192
Query: 179 KANTCNPLLSRMTLHGI 195
T L++ G+
Sbjct: 193 -GETLYDLMAARGWKGV 208
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-----DVILMSPPCQ 64
EVV A + + S + YK N T + +I I+ N P DVI+ PPCQ
Sbjct: 23 GFEVVLANEYDESIANAYKKNHRNTKMIVGDIAELDIK--NVFCPYVGKIDVIIGGPPCQ 80
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV-------KGFEGSRSRDLIT 117
F++ G +K I D R Y + + I + ++ENV KG+ DL
Sbjct: 81 GFSQKGQRKTINDDRNFLFKYFVSVVGLIKPM-YFVMENVPNLLTAEKGYFKKEIYDLFK 139
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
S+ G+ +L+ FGVP +R R +I KR A
Sbjct: 140 SL----GYSLSSGVLNAADFGVPQNRKRAVIIGKRGLA 173
>gi|434390025|ref|YP_007125731.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
gi|428262603|gb|AFZ28551.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
Length = 419
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINA------MSPD-- 55
L A E+ AID N A + Y+HNFP + ++I+ + EEI A ++ D
Sbjct: 23 LGFKAAGFEIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEEIRACIQAKYINWDGE 82
Query: 56 --VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
+ PPCQ F+ GLQ ++ D R + + + + + L ++ENV G E +
Sbjct: 83 IHAVFGGPPCQGFSVAGLQ-NVEDERNSLVGEFVRLVLELNPLAA-IMENVPGIENQKFG 140
Query: 114 DLITSM--LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ + + ++ L+ + +GVP +R R + +A R
Sbjct: 141 CITANLQAVLEEHYFLSKWNLNASDYGVPQARKRVFFVASR 181
>gi|312874943|ref|ZP_07734962.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
gi|311089688|gb|EFQ48113.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2053A-b]
Length = 336
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTIRVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIKRES 179
>gi|421886425|ref|ZP_16317599.1| LcmA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379983821|emb|CCF89872.1| LcmA protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 355
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 16/154 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAM---SPDVILMS--PPC 63
+V IDI+ A+ Y+ NFP +I++ ++E++ N++ S D +L+S PC
Sbjct: 21 GFDVALGIDIDPQASETYRANFPDAAFISDDIRNVTVEKVANSIAFKSADGLLLSACAPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFE---GSRSRDL--I 116
QPF++ K D R +S L ET + +L + ++LENV G + GS+
Sbjct: 81 QPFSQQNKFKTEDDER---ISLLDETHRFVSTLLPEYIMLENVPGIQKIDGSKESPFTRF 137
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
++L + G+ + F+ + ++GVP R R+ L+A
Sbjct: 138 IALLDKLGYEYVYFVANAEKYGVPQRRKRFVLLA 171
>gi|325294602|ref|YP_004281116.1| DNA-cytosine methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065050|gb|ADY73057.1| DNA-cytosine methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 342
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDV--ILMSPPCQPFT 67
+V A D + Y NFP T L R+++ + +I PD I+ PPCQ ++
Sbjct: 21 GFSIVWANDNDKDVWETYTRNFPGTYLDKRDLRVIPVSDI----PDCVGIIGGPPCQSWS 76
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAG 124
G +K I D R + I+ I + L ENV G R + +LI + L +AG
Sbjct: 77 EAGNRKGIEDERGRLVLNYIDII-SRKRPYFFLFENVAGILHRRHKKAFNLILTSLEKAG 135
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+ L+ + VP +R R ++I R S F+ L + LK N
Sbjct: 136 YDIYYKLIDTYDYLVPQNRKRVFIIGFRKDLQISYSFPKPFDRKKTLRDAIYDLKDNVVE 195
Query: 185 PL 186
PL
Sbjct: 196 PL 197
>gi|312874304|ref|ZP_07734336.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
gi|311090177|gb|EFQ48589.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus iners LEAF
2052A-d]
Length = 336
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ +F + V + + + A Y NF T G Q ++E D++ P
Sbjct: 25 RLALESFGAKCVYSNEWDKFAQETYHMNFGDTP-EGDITQ---VDETRIPDHDILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQPF+ +G Q D+R T L + + I + + LENVK F +G ++ ++ +
Sbjct: 81 CQPFSISGKQYGFEDSRGT-LFFDVARIVKEKRPKVVFLENVKNFATHDGGKTIRVVKNT 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ G+ FQ +L+P +G+P R R Y++ R+ S
Sbjct: 140 MLELGYSFQFRVLNPINYGIPQKRERVYMVCFRNDIERES 179
>gi|417093214|ref|ZP_11957574.1| cytosine-specific methyltransferase [Streptococcus suis R61]
gi|353531948|gb|EHC01626.1| cytosine-specific methyltransferase [Streptococcus suis R61]
Length = 410
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N+P T L GR+I + EEI + + DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNYPDTYLDGRDIHAVLPEEIPSETVDVIVGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I A + + +ENVK + + +I LT + +
Sbjct: 97 KGFEDDRGDLFFELLRMIEA-KKPKAIFVENVKNMVSHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDNKEAYD---EFEFPEEIKLTTGL 199
>gi|386585616|ref|YP_006082018.1| cytosine-specific methyltransferase [Streptococcus suis D12]
gi|353737762|gb|AER18770.1| cytosine-specific methyltransferase [Streptococcus suis D12]
Length = 410
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N+P T L GR+I + EEI + + DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNYPDTYLDGRDIHAVLPEEIPSETVDVIVGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I A + + +ENVK + + +I LT + +
Sbjct: 97 KGFEDDRGDLFFELLRMIEA-KKPKAIFVENVKNMVSHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDNKEAYD---KFEFPEEIKLTTGL 199
>gi|429750675|ref|ZP_19283692.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
332 str. F0381]
gi|429164197|gb|EKY06344.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
332 str. F0381]
Length = 374
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + F+ + ID + AN YKHNFP N G +I S + + D+I PCQ
Sbjct: 20 AGYQFTEHYFSEIDKHAIAN--YKHNFPNANYIG-DITSVHGGDFTGI--DIITFGSPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKG-FEGSRSRD---LITSM 119
F+ G + +A A+ + + Y I I + PS+ + ENVKG F + D ++ +
Sbjct: 75 DFSMAGRRAGLAGAKSSLIEYAIALITCVRPSV--FIWENVKGAFSSNAGADFWAILQAF 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLI---AKRS-PAAHSSEASFCF---ETSSELM 172
G+R + LL+ T + +P +R R YL+ A RS P C +T S+
Sbjct: 133 ANIGGYRLEWQLLN-TSWVLPQNRERIYLVGHLAGRSQPGVFPIREDDCLPTTKTQSQFQ 191
Query: 173 TELPK-LKAN 181
T+L +KAN
Sbjct: 192 TQLSGTIKAN 201
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILM 59
N F+ EV A+D N A +KHN P T ++ I++ IE A ++I+
Sbjct: 368 KNEHFTTEV--ALDFNEKALQTFKHNMPDTETVCGDITDEKIKAKVIELCKAKKVNMIIG 425
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS---RDLI 116
PPCQ F+ G + + D R + + + I + ++ENVK + + +D I
Sbjct: 426 GPPCQGFSLKGKKLGLDDPRNFLFNEYLRFV-EILKPEVFVIENVKALLSTSAGWFKDQI 484
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAA 156
+T G+ + +L+ + FGVP +R R I ++ PAA
Sbjct: 485 IKKVTEMGYHVEYGVLTASDFGVPQARQRAIFICSKNKSIPLPAA 529
>gi|418166192|ref|ZP_12802848.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
gi|353829788|gb|EHE09918.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA17971]
Length = 406
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N P T L GR+I + E+I A DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNHPETYLDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK G + + +I LT + +
Sbjct: 97 KGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDQGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+L+ +G +P +R R Y++ + A+
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDTKEAYD 185
>gi|335030551|ref|ZP_08524039.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
gi|334265842|gb|EGL84333.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK1076]
Length = 406
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I + E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPETYLDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+ +L+ +G +P +R R Y++ + A+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD 185
>gi|300727022|ref|ZP_07060441.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella
bryantii B14]
gi|299775566|gb|EFI72157.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Prevotella
bryantii B14]
Length = 446
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
+I SA HNFP N+ R+I + +EI + ++L PCQ F+ G Q+ D
Sbjct: 36 EIKDSALCALNHNFPGENIIKRDITKVASDEIPHFN--ILLGGFPCQAFSFAGKQRGFLD 93
Query: 78 ARCTALSYLIETI--PAIPSLQCLLLENVKGF----------EGSRSRDLITSMLTRAGF 125
R T L + IE I + + LLENV+G E ++ +I ++L G+
Sbjct: 94 TRGT-LFFEIERILRDHLNDVDGFLLENVEGLLKHDKENRNDEIGKTLTVILNVLRSLGY 152
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
+ LL + FG+P R R Y++
Sbjct: 153 NTKYILLDASDFGIPQKRKRVYIVG 177
>gi|407005987|gb|EKE21993.1| hypothetical protein ACD_7C00083G0006 [uncultured bacterium]
Length = 330
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
A RL L + +I+ A Y+ F + ++ + E+ PD LM
Sbjct: 21 AGRLGLQKLGLSCLAFSEIDKYAEKTYREFFGQEEKNHGDLMKINPTEL----PDFDLMI 76
Query: 61 P--PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDL 115
PCQ F+ G +K ++D R + LI+ + +L +LENVKG +G S +
Sbjct: 77 AGFPCQTFSVIGQRKGMSDHRGQVIYGLIKIMKG-KNLPYFILENVKGLVNHDGGNSLRI 135
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE 160
I L +AG+R +LS FGVP R R Y + R ++
Sbjct: 136 ILEELDKAGYRVFYKVLSSLDFGVPQMRERIYFVGIRKDLVKENK 180
>gi|119511452|ref|ZP_01630563.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
gi|119463917|gb|EAW44843.1| modification methylase NlaIV [Nodularia spumigena CCY9414]
Length = 433
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E V + +INT A VY+ NF +L + IE++ +V+L PCQ F+ G
Sbjct: 32 ECVLSSEINTDAQFVYETNFNHKSLGDVRL----IEKLPEH--EVLLAGFPCQSFSHAGK 85
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQ 128
++ D R T L + I + Q + ENV+G + ++ I + + G+ F
Sbjct: 86 KEGFGDTRGT-LFFEITRLLDTYKPQAFIFENVRGIYSHDQGKTLATIKHEIQKRGYSFD 144
Query: 129 EFLLSPTQFGVPNSRTRYYLIA 150
FLL+ FG+P +R R YLI
Sbjct: 145 AFLLNSANFGLPQNRVRIYLIG 166
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILM 59
N F+ EV A+D N A +KHN P T ++ I++ IE A ++I+
Sbjct: 288 KNEHFTTEV--ALDFNEKALQTFKHNMPDTETVCGDITDEKIKAKVIELCKAKKVNMIIG 345
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS---RDLI 116
PPCQ F+ G + + D R + + + I + ++ENVK + + +D I
Sbjct: 346 GPPCQGFSLKGKKLGLDDPRNFLFNEYLRFV-EILKPEVFVIENVKALLSTSAGWFKDQI 404
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAA 156
+T G+ + +L+ + FGVP +R R I ++ PAA
Sbjct: 405 IKKVTEMGYHVEYGVLTASDFGVPQARQRAIFICSKNKSIPLPAA 449
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPR--------TNLRGRNIQSFSIEEINAMSPDVILMSP 61
++ IDI A + Y HNFP +NL+G ++ S + A DVI+ P
Sbjct: 21 GFDIKLGIDIWQDAITTYNHNFPNAVTITEDISNLKGEDL--LSRANLTADEVDVIIGGP 78
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLIT 117
PCQ F+ +G ++ I D R + + I + ++ENV G F+G + +D +
Sbjct: 79 PCQGFSLSG-KRMIDDPRNILYKSFVRMVSDIQP-KIFVMENVPGLVKLFKG-KVKDQVI 135
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA-KRSPAAHSSEASFCFETSSELMTELP 176
+ G+ L+ +GVP +R R + + +S H+ + F F T T
Sbjct: 136 EDFSNLGYEVTLGQLTACDYGVPQARKRVFFVGVNKSKIKHTEK--FVFPTP----THGD 189
Query: 177 KLKANTCNPLLSRMTLHG 194
K+ TC +S + G
Sbjct: 190 KIAYVTCKDAISDLDFIG 207
>gi|385262628|ref|ZP_10040731.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
gi|385189941|gb|EIF37392.1| modification methylase HhaI family protein [Streptococcus sp.
SK643]
Length = 406
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK G + + +I LT + +
Sbjct: 97 KGFDDDRGDLFFELLRMIEGRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ S A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDSKEAYD---LFEFPEEIKLTTSL 199
>gi|406928102|gb|EKD63977.1| hypothetical protein ACD_51C00115G0004 [uncultured bacterium]
Length = 323
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFP-------RTNLRGRNIQSFS-----IEEINA 51
L H E V + + A Y+ NF T L + + F ++E N
Sbjct: 15 LGLHNIGGECVFVSEWDDKARITYEENFKTISPKVFETGLFSKGVNLFEGDITKVDEKNI 74
Query: 52 MSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR 111
D++ PCQPF+ GL+K D+R T L + + I + + LENVKGF+
Sbjct: 75 PKFDILCAGFPCQPFSNAGLKKGFEDSRGT-LFFDVSRIIKHHKPKVVFLENVKGFKNHN 133
Query: 112 SRD---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ ++ L G++ +L+ +GVP +R R Y++
Sbjct: 134 KGNTFHIVKETLENLGYKVYAEVLNAKDYGVPQNRERIYILG 175
>gi|255066464|ref|ZP_05318319.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298369378|ref|ZP_06980696.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
gi|255049344|gb|EET44808.1| modification methylase EcoRII [Neisseria sicca ATCC 29256]
gi|298283381|gb|EFI24868.1| modification methylase EcoRII [Neisseria sp. oral taxon 014 str.
F0314]
Length = 357
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SR 111
D++L PCQPF++ GL+K D R T + + IE I + LLENVKG +G R
Sbjct: 111 DLLLAGFPCQPFSQAGLKKGFTDTRGT-MFFHIEEIIRQKHPKAFLLENVKGLKGHDKGR 169
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ I LT G+ +++ F +P +R R Y++ RS
Sbjct: 170 TFQTIYDSLTALGYTVNAKVMAAKDFNLPQNRERIYIVGFRS 211
>gi|336321961|ref|YP_004601929.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
gi|336105542|gb|AEI13361.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
Length = 456
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
AF + V +++I+ +A VY+ N+ + L G Q + +N + DV+ PCQPF+
Sbjct: 25 AFGGKGVYSVEIDRAAAKVYELNWGHSPL-GDITQDATDSVMNVPAHDVLAAGFPCQPFS 83
Query: 68 RTGLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGFEGSRSR---DLITSMLTRA 123
++G Q+ + + R T ++ + A PS+ +LLENV+ G R R +I L
Sbjct: 84 KSGAQRGMDETRGTLYWNILNIVQAHHPSV--VLLENVRNLAGPRHRHEWQVIVETLRDE 141
Query: 124 GFRFQE--FLLSPTQF-----GVPNSRTRYYLIAKRSP 154
G+R E + SP Q G P R R ++ A P
Sbjct: 142 GYRLSETPAVFSPHQIPPEHGGRPQVRERVFITATYDP 179
>gi|119485563|ref|ZP_01619838.1| modification methylase [Lyngbya sp. PCC 8106]
gi|119456888|gb|EAW38015.1| modification methylase [Lyngbya sp. PCC 8106]
Length = 317
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF--SIEEINAMSPDVILMSPPCQPFT 67
+V A D SA VY+ NF G N+Q +++ I SP+VI+ PPCQ F+
Sbjct: 21 GFNIVAAFDDWESAIKVYQKNFAHPIFSG-NLQEVQTAVDLIKPFSPNVIVGGPPCQDFS 79
Query: 68 RTGLQ-KDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
G + +++ T A S +I I Q +LENV+ F+ SR ++ ++G+
Sbjct: 80 SAGKRDENLGRGDLTLAFSDIITRIKP----QWFILENVELFKKSRQYSQAKALFEQSGY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAK 151
E + + GVP R R++ + +
Sbjct: 136 GLTEKVFDASLCGVPQKRKRFFWVGE 161
>gi|379011713|ref|YP_005269525.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
gi|375302502|gb|AFA48636.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
Length = 347
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 17/191 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
E+ IDI+ A+ ++ NFP +I++ E+I + S + PCQP
Sbjct: 25 GFEIALGIDIDNDASETFRQNFPEAEFINEDIRNLMPEDISEYVDTESKKLFCGCAPCQP 84
Query: 66 FTRTGLQKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFE----GSRSRDLITSML 120
F++ K D R L I +P L +ENV G + G + L
Sbjct: 85 FSKQNRNKTGEDMRINLLDEFYRFIDFYLPDY--LFIENVPGIQNFKMGGSPLESFVHKL 142
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA------HSSEASFCFETSSELMTE 174
G++ + +++ + FGVP R R LI + H S S+ + +
Sbjct: 143 KECGYKIKTQVIAASDFGVPQIRKRLILIGALNKEVEFPSPTHGENRSLPETVFSDWVYD 202
Query: 175 LPKLKANTCNP 185
LP L+A +P
Sbjct: 203 LPLLEAGETDP 213
>gi|427732095|ref|YP_007078332.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427368014|gb|AFY50735.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 314
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A D SA VY+ NF T ++ I + +P++I+ PPCQ F+
Sbjct: 21 GFDIVAAFDYWPSAIEVYRENFQHTIFEKDLLREDVCALIASFNPEIIIGGPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R L+++ I + ++ENV+ S+ + + ++G+
Sbjct: 81 G-KRDENLGRAD-LTFVFANIISQVKPNWFVMENVERISKSKVLKTVLEIFKKSGYGLTS 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+L+ + GVP +R RY+LI +
Sbjct: 139 SILNASYCGVPQARRRYFLIGQ 160
>gi|417939243|ref|ZP_12582536.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343390688|gb|EGV03268.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 406
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQVNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ +L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD---LFEFPEEIKLTTSL 199
>gi|157151353|ref|YP_001449946.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
gi|157076147|gb|ABV10830.1| cytosine-specific methyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 406
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGCRP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ +L+ +G +P +R R Y++ + A+ F F + +L T L
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD---LFKFPEAIKLTTSL 199
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
E + A D N SA + +K N P+ ++ R ++ I + N + ++I+ PPCQ
Sbjct: 26 FETLIATDFNESALNTFKRNIPKAETILGDITKREVKEQIINKANELKINMIIGGPPCQG 85
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTR 122
F+ G +K + D R ++ + + S + ++ENVK + D I +
Sbjct: 86 FSNKGKKKGLDDPRNFLFLEYLDIVEKV-SPELFIIENVKTMLTAVKGYFIDQIVKKIEL 144
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
G++ +L+ FG+P SR R +IA + A
Sbjct: 145 MGYKISYGVLNAKDFGIPQSRPRAIIIAHKEMAV 178
>gi|417847988|ref|ZP_12493944.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
gi|339455586|gb|EGP68188.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK1073]
Length = 406
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N P T L GR+I + E+I A DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNHPDTYLDGRDIHAVQPEDIPAERVDVIMGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK G + + +I LT + +
Sbjct: 97 KGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDTQEAYD---LFEFPEEIKLTTSL 199
>gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 329
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RLS +F E V + + + +A VY+ NF P ++ I+E N D++
Sbjct: 25 RLSLESFGAECVYSNEWDKNAQKVYQMNFGDMPEGDIT-------LIDENNIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G QK D R T L + + I + + + +ENVK F + + ++
Sbjct: 78 GFPCQAFSISGKQKGFEDNRGT-LFFDVARIIKAKNPKVVFMENVKNFASHDNGNTLKIV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ + G+ F +L+ FG+P R R Y++ R
Sbjct: 137 QNTMIDLGYDFYYDILNSLDFGIPQKRERIYMVCFR 172
>gi|307710826|ref|ZP_07647254.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
gi|307617432|gb|EFN96604.1| DNA-cytosine methyltransferase family protein [Streptococcus mitis
SK321]
Length = 406
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK G + + +I LT + +
Sbjct: 97 KGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDTKEAYD---LFEFPEEIKLTTSL 199
>gi|78777762|ref|YP_394077.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78498302|gb|ABB44842.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 328
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E V A +I+ A Y NF T G Q I+E N D++L PCQ F+
Sbjct: 43 KIEFVFASEIDKYARETYYANFGETP-HGDITQ---IDEKNIPPFDILLAGFPCQAFSVA 98
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFR 126
G +K D R T L + + I A + + LENVKG G ++ +I L G+
Sbjct: 99 GHRKGFEDTRGT-LFFDVMRIAAYHKPKVIFLENVKGLVGHDKGKTFKVILETLKELGYY 157
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
+ +L+ +GVP +R R Y++
Sbjct: 158 VEYQILNAKDYGVPQNRERIYIVG 181
>gi|417936804|ref|ZP_12580110.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
gi|343399246|gb|EGV11768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis X]
Length = 406
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGCKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+ +L+ +G +P +R R Y++ + A+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD 185
>gi|418088332|ref|ZP_12725497.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|418201844|ref|ZP_12838275.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|419454963|ref|ZP_13994924.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|421285192|ref|ZP_15735969.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|421306757|ref|ZP_15757403.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
gi|353756009|gb|EHD36612.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA47033]
gi|353868526|gb|EHE48412.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae GA52306]
gi|379630031|gb|EHZ94622.1| modification methylase HhaI domain protein [Streptococcus
pneumoniae EU-NP04]
gi|395887171|gb|EJG98186.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60190]
gi|395908720|gb|EJH19597.1| cytosine-specific methyltransferase [Streptococcus pneumoniae
GA60132]
Length = 406
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ +L+ +G +P +R R Y++ ++ EA FE E+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIV-----GFNTKEAYDLFEFPEEI 193
>gi|425465275|ref|ZP_18844585.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
gi|389832515|emb|CCI23796.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9809]
Length = 405
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 119 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESSQEILAQYNPEIIVGSPPCQDFSSA 175
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ L + G+ E
Sbjct: 176 G-KRDEGLGRANLTLTFAEIVTGV-SPQWFVMENVDRIEKSKILTLAKQIFKSHGYGLTE 233
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 234 KVINSCYCGVPQTRKRYFLIGK 255
>gi|329767116|ref|ZP_08258644.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341]
gi|328837841|gb|EGF87466.1| hypothetical protein HMPREF0428_00341 [Gemella haemolysans M341]
Length = 396
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A +I+ +A YK NFP L R+I EEI DVI+ PCQ F+ G +
Sbjct: 24 VVYANEIDKNARITYKLNFPDVFLDPRDIHEVKPEEIKEEKLDVIVGGFPCQAFSIAGYR 83
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + LENVK + + +I LT + +
Sbjct: 84 KGFEDERGDLFFELLRIIKN-KKPRAIFLENVKNMVTHDHGNTFKVIKEALTENNYYIKW 142
Query: 130 FLLSPTQFG-VPNSRTRYYLIA 150
+L+ +G VP +R R Y++
Sbjct: 143 KVLNGKDYGNVPQNRERIYIVG 164
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMSPPCQPFTRTGL 71
A DI A Y +N+P +I+ +++ I DVI+ PPCQ F+ G
Sbjct: 34 ASDIMKEAELTYSYNYPSVPFFREDIRQIPLDKFKKVIGDKEVDVIIGGPPCQGFSNMG- 92
Query: 72 QKDIADARCTALSYLIETIPAIPSL---QCLLLENVKG----FEGSRSRDLITSMLTRAG 124
K+ +D R +YL E ++ + +C L ENVKG FEG +++ S L+ G
Sbjct: 93 NKNSSDPR----NYLFENYVSLVNTFKPKCFLFENVKGLLTMFEGRFFENIVNSFLS-IG 147
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ L+ + +GVP R R +L+ R
Sbjct: 148 YSISYTLIDSSLYGVPQKRERVFLMGTR 175
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP-----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
L+ + D + A Y+ N +L IQ + D+++ PPCQ
Sbjct: 391 GLDCILGADFDRYAVEAYRKNHTDHECLEADLSDEEIQHNIAMRLKEQKVDLVVGGPPCQ 450
Query: 65 PFTRTGLQK-------DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLIT 117
F+ G ++ I++ + L + I + ++ENV G +++ + +
Sbjct: 451 GFSIFGKRRFVNTKNHQISEDKRNNLVFAFANIVIKSEAKWFIMENVPGILSAQNGEYVK 510
Query: 118 SM---LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS--------PAAHSSEASFC-- 164
++ G+R + +++ +GVP R R+ LI ++ P S+ S+
Sbjct: 511 AIQEFFAENGYRTECKVINAADYGVPQLRKRFLLIGTKTDLVIPFPKPKYFSTPDSWQLP 570
Query: 165 FETSSELMTEL 175
+ T E++T+L
Sbjct: 571 YRTVGEVITDL 581
>gi|448671300|ref|ZP_21687239.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
gi|445765903|gb|EMA17040.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
Length = 392
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 10 SLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEE------INAMSPDVILMSP 61
E++ +D + A Y+ H+ P L ++ + EE I+ DV++ P
Sbjct: 23 GFEMLAGLDADEDALDTYRRNHSAPGYCL---DLGAHEPEEVLDLLDIHPDDVDVVIGGP 79
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT 121
PCQ + G +D D R T L + ++ + A S ++ENV+ R+ DL ++L+
Sbjct: 80 PCQGLSSAG-HRDPDDPRNTLLLWFLDYVDAT-SPDAFVIENVRELTWDRNADLFDALLS 137
Query: 122 RA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
RA GF + +L+ + FGVP R R +++ R
Sbjct: 138 RADELGFETEYQILTASDFGVPQKRKRVFVVGVRD 172
>gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A +I+ +A YK NFP L R+I EEI DVI+ PCQ F+ G +
Sbjct: 34 VVYANEIDKNARITYKLNFPNVFLDPRDIHEVKPEEIKEEKLDVIVGGFPCQAFSIAGYR 93
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + LENVK + + +I LT + +
Sbjct: 94 KGFEDERGDLFFELLRIIKN-KKPRAIFLENVKNMVTHDHGNTFKVIKEALTENNYYIKW 152
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ ++ F F +L T+L
Sbjct: 153 KVLNGKDYGNIPQNRERIYIVGFLEKESYD---KFEFPNEIKLETKL 196
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQP 65
E + A D N SA + +KHN P+ ++ +I ++E N + ++I+ PPCQ
Sbjct: 26 FETLIATDFNKSALNTFKHNIPKADIILGDITKSEVKEQIINKANELKINMIIGGPPCQG 85
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTR 122
F+ G ++ + D R ++ + + S + ++ENVK + D I +
Sbjct: 86 FSNKGKKQGLDDPRNFLFLEYLDIVEKV-SPELFIIENVKTMLIAVKGYFIDQIVEKIEM 144
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G++ +L+ FGVP +R R +IA +
Sbjct: 145 MGYKISYGVLNAKDFGVPQNRARAIIIAHK 174
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQPFTR 68
++ AI+I+ A ++ N P +L +I+ + E+I + P +IL PCQ F+
Sbjct: 22 IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDEQILDTFGEIKPHIILGGIPCQGFSI 81
Query: 69 TGLQK-DIADARCTALSYLIETIPAIPSL---QCLLLENVKGFEGSRSR------DLITS 118
K D D+R +Y+ + + I SL + +++ENV +++ DLI S
Sbjct: 82 CNQNKGDRQDSR----NYMFQDLIRISSLLQPEIIIIENVPNLIKAKTTNRQLVIDLIMS 137
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L G++ +L+ T +G+P R R +++A R H
Sbjct: 138 KLRHLGYQVNYQILNATDYGIPQVRKRLFILAHRCDLTH 176
>gi|322392562|ref|ZP_08066022.1| DNA methylase [Streptococcus peroris ATCC 700780]
gi|321144554|gb|EFX39955.1| DNA methylase [Streptococcus peroris ATCC 700780]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+ G +
Sbjct: 37 VVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIAGYR 96
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I + + +ENVK G + + +I LT + +
Sbjct: 97 KGFDDDRGDLFFELLRMIEGRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKW 155
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+L+ +G +P +R R Y++ + A+ F F +L T L
Sbjct: 156 KVLNGKDYGNIPQNRERIYIVGFDTKEAYD---LFEFPEEIKLTTSL 199
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQP 65
E + A D N SA + +KHN P+ ++ +I ++E N + ++I+ PPCQ
Sbjct: 27 FETLIATDFNKSALNTFKHNIPKADIILGDITKSEVKEQIINKANELKINMIIGGPPCQG 86
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTR 122
F+ G ++ + D R ++ + + S + ++ENVK + D I +
Sbjct: 87 FSNKGKKQGLDDPRNFLFLEYLDIVEKV-SPELFIIENVKTMLIAVKGYFIDQIVEKIEM 145
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
G++ +L+ FGVP +R R +IA +
Sbjct: 146 MGYKISYGVLNAKDFGVPQNRARAIIIAHK 175
>gi|408789603|ref|ZP_11201258.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
gi|408521209|gb|EKK21195.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 14 VTAIDINTSANSVYKHNFPR--TNLRGRNIQSFSIEEI--NAMSPDVILMSPPCQPFTRT 69
V A + + +A ++ NF + T L R+I+ + ++I + DV+L PCQPF+
Sbjct: 28 VYANEFDKNAQHTFELNFNKRGTYLDRRDIKEVTTDDIRKQTQNADVLLAGFPCQPFSVA 87
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF---EGSRSRDLITSMLTRAG 124
G +K D R ET+ I SLQ + LENVK + + +I + G
Sbjct: 88 GFRKGFDDNRG---DLFFETLRIIKSLQPRVVFLENVKNLVTHDHGNTFKVIREFMVHTG 144
Query: 125 FRFQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+ + +L+ ++G VP +R R Y++ + A F F EL T L +
Sbjct: 145 YYIKWKVLNSKEYGNVPQNRERIYVVGFKDKVAFE---QFDFPNKIELTTSLSDI 196
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
L+ + A D N SA K+N N++ ++ +F + I + D+++ SPPCQ F+
Sbjct: 23 GLKHIGAYDFNESACRTAKYNISE-NVKCVDLNTFDVRTILDGNVDIVVGSPPCQGFSNE 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR----AGF 125
G K+ D R + + + I I + + + ENV GF+ S + R +
Sbjct: 82 GY-KNEKDPRNSLVWKFFDFI-EILTPKVWIFENVPGFKTSYKGIYFKQLQQRLELMPAY 139
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEAS 162
++ F+L+ + +GVP R+R++ I + EA+
Sbjct: 140 QWNYFILNSSDYGVPQKRSRFFAIGAKKFQPQRPEAT 176
>gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
Length = 453
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
++ +Y+ N+P + G +I + ++I A D+I PCQPF++ G ++ D
Sbjct: 35 ELKEDLRKLYQINYPGVRIEG-DITKIAPKDIPAH--DIICAGFPCQPFSQAGNRQGFND 91
Query: 78 --ARCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDLITSMLTRAGFRFQEFLL 132
R T Y+I+ + A + ++LENV KG + + +I L + + +L
Sbjct: 92 EKGRGTLFDYIIDIV-AYHKPKYIILENVSNLKGHDNGNTWRIIQEKLDEQEYSVKAEIL 150
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
SP +FG+P R R Y++ R
Sbjct: 151 SPHEFGIPQHRKRIYIVCIRK 171
>gi|298373723|ref|ZP_06983712.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274775|gb|EFI16327.1| modification methylase EcoRII [Bacteroidetes oral taxon 274 str.
F0058]
Length = 457
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A +I +YK NFP T + +I EEI S D++ PCQPF++ G ++
Sbjct: 36 VFASEIKDDLRKLYKINFPETPIIEGDITKIKSEEI--PSHDILCAGFPCQPFSQAGKRQ 93
Query: 74 DIADARCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDLITSMLTRAGFRFQE- 129
D L Y I I + +LLENV K G R+ I + L + E
Sbjct: 94 GFNDKDHGNLFYNICDIVKSHRPKYILLENVANLKNHNGGRTWKTIKNELEALEYDVAEP 153
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+LSP QF +P R R Y++ S F F T ++ E+ K+
Sbjct: 154 AILSPHQFSIPQHRRRIYIVC--VDKNKRSLEGFSFPTPTKNKCEISKI 200
>gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2]
gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2]
Length = 401
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + +A Y N+P+T L R+I +E+ D+I+ PCQ F+
Sbjct: 34 KFRVVYANEFDKNAQITYAENYPQTPLDKRDIHEVDSKEVPV--SDLIVGGFPCQAFSIA 91
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK + + +I LT G+
Sbjct: 92 GYRKGFEDDRGDLFFELLRIIKE-NKPKVIFIENVKNMVTHDHGNTFKIIREALTMNGYS 150
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ +L+ +G VP +R R Y++ R+ A +F F + EL T+L
Sbjct: 151 IKWKVLNGKDYGNVPQNRERIYVVGFRNQQAFD---NFHFPSKVELTTKL 197
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQPFTR 68
++ AI+I+ A ++ N P +L +I+ + E+I + P +IL PCQ F+
Sbjct: 63 IIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDEQILDTFGEIKPHIILGGIPCQGFSI 122
Query: 69 TGLQK-DIADARCTALSYLIETIPAIPSL---QCLLLENVKGFEGSRSR------DLITS 118
K D D+R +Y+ + + I SL + +++ENV +++ DLI S
Sbjct: 123 CNQNKGDRQDSR----NYMFQDLIRISSLLQPEIIIIENVPNLIKAKTTNRQLVIDLIMS 178
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L G++ +L+ T +G+P R R +++A R H
Sbjct: 179 KLRHLGYQVNYQILNATDYGIPQVRKRLFILAHRCDLTH 217
>gi|419366300|ref|ZP_13907458.1| cytosine-specific methyltransferase [Escherichia coli DEC13E]
gi|378211791|gb|EHX72124.1| cytosine-specific methyltransferase [Escherichia coli DEC13E]
Length = 396
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----SPDVILMSPPCQP 65
+V+ A+DI+ + S Y NFP T + +I E N++ D I+ PPCQ
Sbjct: 36 GFDVIAAVDIDATLQSAYARNFPNTKIINGDISLLGESEWNSIILSKKIDGIIGGPPCQG 95
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
++R G D+ D R + L + T+ I + ++ENV+G ++ + S L
Sbjct: 96 YSRMG-HSDVNDPRRSLLRHFFRTVNIIKP-KFFVMENVEGLMDEKNVYELKSALKILDA 153
Query: 126 RFQ---EFLLSPTQFGVPNSRTRYYLIA 150
+Q ++ + FG P R R +I
Sbjct: 154 DYQVLDPMIIDASDFGAPTRRRRVVVIG 181
>gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 460
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFS-IEEINAM--SPDVILMSPPCQPFTRTGLQKD 74
+I+ A VY+HNF N + + F I +I + + D+I+ PCQP++ G K
Sbjct: 51 EIDKQAIKVYQHNF--INYLTSDEREFGDITQIPNLPQNVDIIVGGVPCQPWSVAGQLKG 108
Query: 75 IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFL 131
D R +I I + +LENVKG +++ DLI S L +AG+ + +
Sbjct: 109 FEDPRGRLWFDVIRLIQN-SQPKSFILENVKGLAFPKNKANLDLILSHLEQAGYSVKWQV 167
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
L+ FG+P +R R +L+ R+ S F
Sbjct: 168 LNAYDFGLPQNRDRVFLVGIRNDIEGSQNYQF 199
>gi|422875785|ref|ZP_16922255.1| DNA methylase [Streptococcus sanguinis SK1056]
gi|332362221|gb|EGJ40021.1| DNA methylase [Streptococcus sanguinis SK1056]
Length = 412
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I A DVI+ PCQ F+
Sbjct: 40 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPAERVDVIMGGFPCQAFSIA 99
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 100 GYRKGFDDDRGDLFFELLRMIEWRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 158
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+ +L+ +G +P +R R Y++ + A+
Sbjct: 159 IKWKVLNGKDYGNIPQNRERIYIVGFDTKEAYD 191
>gi|414075630|ref|YP_006994948.1| type II modification methylase [Anabaena sp. 90]
gi|413969046|gb|AFW93135.1| type II modification methylase [Anabaena sp. 90]
Length = 317
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-------AMSPDVILMSPP 62
E+V A + SA +VY+ NF I + + ++N PDVI+ PP
Sbjct: 26 GFEIVAAFENWKSAINVYQQNFHHP------IFEYDLSQVNNNYSIFKQFLPDVIIGGPP 79
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
CQ F+ G + + D LS I A S Q +LENV+ F S +L
Sbjct: 80 CQDFSSAGKRNE--DLGRGDLSITFAEIVANVSSQWFVLENVELFRKSHKYQEFKQILKS 137
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
AG+ E +L + GVP R R++ I +
Sbjct: 138 AGYGLTEKVLDASLCGVPQKRKRFFCIGE 166
>gi|430377053|ref|ZP_19431186.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
gi|429540190|gb|ELA08219.1| hypothetical protein MOMA_06646 [Moraxella macacae 0408225]
Length = 335
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E V A + + A Y N+ L +I +++I D+IL PCQ F+
Sbjct: 43 QIEFVFASEFDKFAQQTYYANYGE--LPHGDITQIDVKDI--PHHDIILAGFPCQAFSVA 98
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFR 126
GL+K D R T L + + I + + LENVKGF+ + ++ L G+R
Sbjct: 99 GLRKGFEDTRGT-LFFDVARIAKHHRPKLIFLENVKGFKNHDKGNTFKVVKRTLEDLGYR 157
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
+L+ FG+P +R R Y+IA
Sbjct: 158 VYADILNAKNFGIPQNRERIYIIA 181
>gi|315637499|ref|ZP_07892709.1| modification methylase EcoRII [Arcobacter butzleri JV22]
gi|315478217|gb|EFU68940.1| modification methylase EcoRII [Arcobacter butzleri JV22]
Length = 326
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I E + + D++L PCQ F+ G +K D R T L + + I Q + LENV
Sbjct: 74 KINEEDIPNHDIVLAGFPCQAFSIAGHRKGFEDIRGT-LFFDVARIVDKHKPQVVFLENV 132
Query: 105 KGFEG---SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
KGF+ + + I S L G+R +L+ FGVP +R R Y+IA
Sbjct: 133 KGFKNHDKGNTFNTIKSTLENMGYRVFAEVLNAKDFGVPQNRERIYIIA 181
>gi|427420225|ref|ZP_18910408.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 7375]
gi|425762938|gb|EKV03791.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 7375]
Length = 338
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L + E +T D + A++ HN P+ N + +++S + D+ PC
Sbjct: 25 LGLESAGFEHLTVFDNDKHAHATLLHNRPQWNPQLCDVKSLDCSRYQDI--DLFAGGVPC 82
Query: 64 QPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLIT 117
PF+ G QK D R AL + +T P + ++LENV+GF G+R R +
Sbjct: 83 PPFSIAGQQKGANDERDLFPDALRLIKQTQP-----KAVILENVRGFSGARFTEYRKYLI 137
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L + GF Q +L + +GVP R R+ L+A
Sbjct: 138 RELGQLGFTTQWQVLKASDYGVPQLRPRFILVA 170
>gi|421137760|ref|ZP_15597837.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens
BBc6R8]
gi|404511113|gb|EKA25006.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas fluorescens
BBc6R8]
Length = 383
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMSPPCQP 65
+ A+DI+++ S Y+ N+P T N+ + + I ++ PD I+ PPCQ
Sbjct: 28 GFHTLAAVDIDSTIQSGYRKNYPHTKAIEGNVAEIMLSDWHQLIGSVRPDGIIGGPPCQG 87
Query: 66 FTRTGL-QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAG 124
F+R G QKD D R + + I + + ++ENV+G + D + + +
Sbjct: 88 FSRIGKRQKD--DPRNNLVHHFYRHIREL-DPKFFIMENVQGILDEDNVDTLMQGIEQVS 144
Query: 125 FRFQ---EFLLSPTQFGVPNSRTRYYLIA 150
RF+ F+++ FG P +R R ++
Sbjct: 145 GRFEILGPFVINAADFGAPTNRYRVLVVG 173
>gi|169823657|ref|YP_001691160.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
gi|167832277|dbj|BAG09192.1| cytosine-specific methyltransferase [Finegoldia magna ATCC 29328]
Length = 332
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E + A +I+ A YK NFP L R+I+ ++I V++ PCQ F+
Sbjct: 23 GFETIYANEIDEKARQTYKLNFPEVFLDSRDIRDVQKDDI-PHEASVVVSGFPCQSFSIA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K + D + L + + + LENVK G + ++ ++ L G+
Sbjct: 82 GYRKGLEDEKNGDLFFETLRVAKEVEADVIFLENVKNLVGHDRGKTFRIMLDALESNGYY 141
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRS 153
+L+ T+FG +P +R R Y++A R
Sbjct: 142 VDYKVLNATEFGNIPQNRERIYIVAFRD 169
>gi|317473510|ref|ZP_07932802.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
gi|316899021|gb|EFV21043.1| C-5 cytosine-specific DNA methylase [Anaerostipes sp. 3_2_56FAA]
Length = 385
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRG--RNIQSFSIEEINAMSPDVILMSP 61
N F+L V A + A Y+ NF + N++S ++E+I SP++I+ P
Sbjct: 17 FQNAGFNL--VAAFEFWDIAAKCYEENFNHPVFKSDLSNVKS-AVEQIRRFSPELIIGGP 73
Query: 62 PCQPFTRTGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML 120
PCQ F+ G + + + A T + + +IE I Q ++ENV + S++ + ++
Sbjct: 74 PCQDFSHAGKRVESSRASLTESYAKIIENIKP----QYFVMENVDRAQKSKAFEKAENIF 129
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
AG+ + +L ++ GVP R R++ I
Sbjct: 130 KNAGYGLTKIVLDASKCGVPQKRKRFFCIG 159
>gi|127420|sp|P19888.1|MTBA_BACAR RecName: Full=Modification methylase BanI; Short=M.BanI; AltName:
Full=Cytosine-specific methyltransferase BanI
gi|216242|dbj|BAA00613.1| BanI modification methylase [Aneurinibacillus aneurinilyticus]
Length = 428
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTG 70
E V + +I+ A Y NF + +G I EI + D +L PCQPF+ G
Sbjct: 31 ECVLSSEIDKKACETYALNF-KEEPQG------DIHEITSFPEFDFLLAGFPCQPFSYAG 83
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRF 127
Q+ D R T L + +E + + LLENV+G + R+ I S L G+
Sbjct: 84 KQQGFGDTRGT-LFFEVERVLRDNRPKAFLLENVRGLVTHDKGRTLKTIISKLEELGYGV 142
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
LL+ + FGVP +R R Y++
Sbjct: 143 SYLLLNSSTFGVPQNRVRIYILG 165
>gi|383318860|ref|YP_005379701.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
gi|379320230|gb|AFC99182.1| DNA-methyltransferase (dcm) [Methanocella conradii HZ254]
Length = 420
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
E V A +IN + +Y NF P ++R +IE+I D+I PCQPF++
Sbjct: 23 ECVFASEINENLRKIYLANFGIKPEGDIR-----DIAIEKIPPH--DIICAGFPCQPFSK 75
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSRSRDLITSMLTRAGF 125
G QK + D L Y I I + L+ ENV ++ +I +L G+
Sbjct: 76 AGSQKGLNDTERGTLFYEILKIIDYHDPKYLIFENVPNIRRHNNGQTWRIIEGLLRDRGY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+SP FG+P R R Y++ K++
Sbjct: 136 DISCNDISPHHFGIPQIRLRTYIVGKKN 163
>gi|376006068|ref|ZP_09783405.1| Type II DNA modification enzyme (Methyltransferase),
Cytosine-specific methyltransferase, DNA-cytosine
5-methylase [Arthrospira sp. PCC 8005]
gi|423065083|ref|ZP_17053873.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|375325524|emb|CCE19158.1| Type II DNA modification enzyme (Methyltransferase),
Cytosine-specific methyltransferase, DNA-cytosine
5-methylase [Arthrospira sp. PCC 8005]
gi|406714326|gb|EKD09494.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 342
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 42 QSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETI----PAIPSLQ 97
Q+ I + PDVI+ PPCQPF+ GLQK D+R ++ I PAI
Sbjct: 72 QTLEIGQDLCNHPDVIIGGPPCQPFSVGGLQKGPRDSR-DGFPIFLDAIERYQPAI---- 126
Query: 98 CLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ ENV+G ++ + + I + L R +R L++ +GVP R R +++A ++ A
Sbjct: 127 -AIFENVRGMLYKNRQYLEKIVAELERLNYRVDIKLINAVNYGVPQKRERLFVVAYQT-A 184
Query: 156 AHSSEA 161
H EA
Sbjct: 185 WHWPEA 190
>gi|209525305|ref|ZP_03273847.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209494320|gb|EDZ94633.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 342
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 42 QSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETI----PAIPSLQ 97
Q+ I + PDVI+ PPCQPF+ GLQK D+R ++ I PAI
Sbjct: 72 QTLEIGQDLCNHPDVIIGGPPCQPFSVGGLQKGPRDSR-DGFPIFLDAIERYQPAI---- 126
Query: 98 CLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ ENV+G ++ + + I + L R +R L++ +GVP R R +++A ++ A
Sbjct: 127 -AIFENVRGMLYKNRQYLEKIVAELERLNYRVDIKLINAVNYGVPQKRERLFVVAYQT-A 184
Query: 156 AHSSEA 161
H EA
Sbjct: 185 WHWPEA 190
>gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 415
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------S 53
L A E+ AID N + Y+HNFP + ++I+ + +EI A
Sbjct: 23 LGFEAAGFEIAIAIDNNPIVLATYQHNFPHATVLCKDIREVTAQEIRACIQAKYVDWDGE 82
Query: 54 PDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
+ PPCQ F+ GLQ ++ D R + + + + + L ++ENV G E +
Sbjct: 83 IHTVFGGPPCQGFSVAGLQ-NVEDERNSLVGEFVRLVLELNPLAA-IMENVPGIENQKFG 140
Query: 114 DLITSM--LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ + + ++ L+ + +GVP +R R + +A +
Sbjct: 141 CITANLQAVLEEHYFLSKWNLTASDYGVPQARKRVFFVASK 181
>gi|374374531|ref|ZP_09632190.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
gi|373233973|gb|EHP53767.1| DNA-cytosine methyltransferase [Niabella soli DSM 19437]
Length = 450
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
H E V A +++ + VYK N+ P+ ++R I I+ I D++ PC
Sbjct: 18 HELGHECVFASELSQTLREVYKTNWGIEPKGDIR--KIVDHDIDSIPEH--DILCAGFPC 73
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDLITSML 120
QPF++ G QK D L I I A + +LENV + + + + + S L
Sbjct: 74 QPFSKAGKQKGREDEERGTLFDEIVKILAHRKPKFFILENVPFIRQHDNEATWNYMHSEL 133
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
T+ G+ + + SP FG+P R R +++ H F F+ E T L
Sbjct: 134 TKLGYEVEHEVYSPQDFGIPQHRKRIFIVGSLVGLEH-----FSFKEIDEQKTSL 183
>gi|186683285|ref|YP_001866481.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186465737|gb|ACC81538.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 419
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------S 53
L A E+ AID N A + Y+HNFP + ++I+ + EEI A
Sbjct: 23 LGFKAAGFEIAIAIDNNPIALATYQHNFPHATVLCKDIREVTGEEIRACIQAKYGDWDGE 82
Query: 54 PDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
+ PPCQ F+ GLQ ++ D R + + + + L ++ENV G E +
Sbjct: 83 IHTVFDGPPCQGFSVAGLQ-NVEDERNGLVGEFVRLVLELNPLAA-IMENVPGIENHKFG 140
Query: 114 DLITSM--LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ + + ++ L+ + +GVP +R R + +A +
Sbjct: 141 CITANLQAVLEEHYFLSKWNLNASDYGVPQARKRVFFVASK 181
>gi|90425781|ref|YP_534151.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18]
gi|90107795|gb|ABD89832.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB18]
Length = 374
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMSPPCQP 65
VV+A+++ A + YK N P +++++ + ++ +P D++ PPCQ
Sbjct: 36 GFRVVSAVEVEQHAFATYKANHPEVFAYKQDVRTVDGQSLSMHAPRRKIDLLAGCPPCQG 95
Query: 66 FTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM--- 119
FT + D R +S L++ I + +++ENV S RDL+
Sbjct: 96 FTSLTSKWRRQDPRNNLVREMSRLVQEI----RPRAVMMENVPRL-ASTGRDLLDGFIVD 150
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS------PAAHSSEASF---CFETSSE 170
L +AG+R +L +G P +R R L+A R PA HSS + F ++T +
Sbjct: 151 LKKAGYRVAWDVLQVADYGTPQARKRLVLLAGRGFDIDLPPATHSSTSGFDLPPWKTVRD 210
Query: 171 LMTELP 176
+ LP
Sbjct: 211 TIGGLP 216
>gi|434394728|ref|YP_007129675.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428266569|gb|AFZ32515.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 372
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++VV+A DI+ A Y+ N P ++ +I + I+ D++ PPCQ F+
Sbjct: 27 GVDVVSANDIDRDACLTYEANHPGGIIKCSDINEYLIDIHRFKGIDLVFGGPPCQGFSVA 86
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGF 125
G + + D R L ++ + + + + ENVK + S+ R + S+ ++ G+
Sbjct: 87 G-KMNPNDPRNELLWVFMKAV-ELTKPRAFICENVKALAVFDKWSKMRQRLFSVTSQLGY 144
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
++ +L+ + FGVP SR R +LI R
Sbjct: 145 SYKLVVLNSSDFGVPQSRERMFLIGFR 171
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + + +D N A +K+N P + +L+ ++S+ I+E ++I+ PPCQ
Sbjct: 24 NFKTIIGVDFNKFALETFKYNHPDSKVICGDLKDALVKSYIIDEAQKNGINMIIGGPPCQ 83
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + D R +E + I ++ENVK E S + I +
Sbjct: 84 GFSSKGKNLGLQDERNFLFKEYLEIVKIIKP-DIFIIENVKNLITCENSYFLNEIKKEIK 142
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ + +L+ FGVP +R R +LIA +
Sbjct: 143 KLDYKLEFKVLNALDFGVPQNRQRAFLIASK 173
>gi|157737722|ref|YP_001490405.1| DNA (cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
gi|157699576|gb|ABV67736.1| DNA (Cytosine-5-)-methyltransferase [Arcobacter butzleri RM4018]
Length = 326
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I+E + + D+IL PCQ F+ G +K D R T L + + I Q + LENV
Sbjct: 74 KIKEEDIPNHDIILAGFPCQAFSIAGHRKGFDDIRGT-LFFDVARIVNKHKPQVVFLENV 132
Query: 105 KGFEG---SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
KGF+ + + + S L G+R +L+ FGVP +R R Y+IA
Sbjct: 133 KGFKNHDKGNTFNTVKSTLEDMGYRVFAEVLNARNFGVPQNRERIYIIA 181
>gi|402300660|ref|ZP_10820134.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
gi|401724193|gb|EJS97577.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMS 60
L+ +F E V A + + A + Y NF P ++ IE D++
Sbjct: 28 LAMKSFGAECVYASEWDKHAQTTYSANFGIHPEGDIT-------QIEASEIPQHDILCAG 80
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQPF+ +G ++ D R T L + + I + + +ENV+ F + + + +
Sbjct: 81 FPCQPFSISGKRQGFEDTRGT-LFFDVARIVKHHQPKLVFMENVRNFATHDQGNTLNTVR 139
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L + G++F +L+ +QFG+P +R R Y++A R
Sbjct: 140 ETLEQIGYKFWHQVLNASQFGLPQNRERIYMVAIRK 175
>gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
Length = 335
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 25/198 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + + Y+HNFP TNL R+I EI + D I+ PPCQ ++
Sbjct: 21 GFNVVWANEYDKTIWDTYQHNFPNTNLDTRSITEIPSTEIP--TSDGIIGGPPCQSWSEA 78
Query: 70 GLQKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGF 125
G + I D R I + PS L ENV G R R+ + ++ + G+
Sbjct: 79 GALRGINDHRGQLFFEYIRILKDKQPSF--FLAENVSGILFERHREAFSEIIKQFNEIGY 136
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
+LL+ + VP R R ++ + +EL PK A+ P
Sbjct: 137 NVSYYLLNAHDYSVPQDRKRVIIVG--------------YHVKTELYFTPPKPIAH--KP 180
Query: 186 LLSRMTLHGILDSTHPSG 203
LL R + + ++ P G
Sbjct: 181 LL-RDAIWDLRETAKPGG 197
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-INAMSPDVILMSPPCQPFTRT 69
++V A+D ++SA + Y+ N T ++I FS EE + S DV+L PPCQ ++
Sbjct: 25 FDLVWALDHDSSALASYQSNHKTTKTICKDIAQFSKEECLGYGSIDVLLGGPPCQSYSTL 84
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G K D R ++ + A+ + L ENV G +G + I + + G++
Sbjct: 85 G--KRQMDTRAHLFQEYLKILAAV-HPKIFLFENVVGLLSMQGGKLFHSICACFAQMGYQ 141
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE---------LMTELPK 177
+L+ FGVP R R L+ HS + F F + + +LP+
Sbjct: 142 IYSRVLNAMHFGVPQIRQRVILVG----VDHSYQKPFVFPKPTHEKEFINLRLALDDLPQ 197
Query: 178 LKAN 181
+K+
Sbjct: 198 IKSG 201
>gi|434381477|ref|YP_006703260.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
gi|404430126|emb|CCG56172.1| cytosine-specific DNA-methyltransferase [Brachyspira pilosicoli
WesB]
Length = 417
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ + E V A +I+T Y NF + +I + S+++I D++ PC
Sbjct: 15 LALNKLGYECVFASEIDTILQDTYNKNFGI--IPYGDISNISLKDIPKH--DILCSGFPC 70
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
QPF++ G +K+ DAR L+Y +E I +LENV+ F S+ + T+ + +
Sbjct: 71 QPFSKAGERKETEDARGLLLNY-VEKIILNHKPSFFILENVERFGKSKLKKDFTNKV-ES 128
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ Q ++SP Q G+P R R ++I ++
Sbjct: 129 LYNIQYVIVSPDQLGIPQHRPRIFIIGQK 157
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
N F+ ++ AIDI+ A S YK N + G I+E + DV++ PPC
Sbjct: 19 FKNSGFN--IIWAIDIDKDAVSTYKENLGDHIILG---DITKIQEKDIPKADVVIGGPPC 73
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLIT 117
Q F+ G ++ D R + + I I +C + ENV G EG+ D +
Sbjct: 74 QSFSLVGKRRS-DDERGQLVWQYLRIINEI-RPKCFVFENVVGLKSAKTAEGNLVLDELI 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ Q +L+ +GVP R R +++ R
Sbjct: 132 IAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTRE 167
>gi|431797343|ref|YP_007224247.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
gi|430788108|gb|AGA78237.1| DNA-methyltransferase Dcm [Echinicola vietnamensis DSM 17526]
Length = 452
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP-RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
E V A ++ S +Y+ NF R N R+I ++E+I D++ PCQPF++
Sbjct: 29 GFECVFASELKESLADLYEINFGIRPN---RDITKIAVEDIPVH--DILCAGFPCQPFSK 83
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR----AG 124
G QK + D R +L I I + +LENV+ E + + + R
Sbjct: 84 AGSQKGLEDERNGSLFDKIVEILDYHKPKYFILENVRNLENHKKGETWAYIQNRLENELN 143
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + + SP FG+P R R++++
Sbjct: 144 YSIDKHVFSPHHFGIPQHRERFFIVG 169
>gi|406659161|ref|ZP_11067299.1| modification methylase SsoII [Streptococcus iniae 9117]
gi|405577270|gb|EKB51418.1| modification methylase SsoII [Streptococcus iniae 9117]
Length = 406
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + +A Y N+P T L R+I + +EI + + D+I+ PCQ F+
Sbjct: 34 EFRVVYANEFDKNARKTYALNYPDTFLDSRDIHAVDPDEIPSETVDLIVGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFEDERGDLFFELLRMI-KVKKPRAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ +L+ +G +P +R R Y++ + EA FE E+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIV-----GFDNKEAFDLFEFPEEI 193
>gi|393781071|ref|ZP_10369272.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
gi|392677406|gb|EIY70823.1| DNA (cytosine-5-)-methyltransferase [Bacteroides salyersiae
CL02T12C01]
Length = 371
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 47 EEINAMSP------DVILMSPPCQPFTRTGLQKDIADARCT---ALSYLI-ETIPAIPSL 96
E+IN + P DV PCQPF+ GL++ D R T +++ +I E I A
Sbjct: 68 EDINDVVPSHIPDFDVCCGGFPCQPFSVAGLKRGFEDTRGTLFFSIANIIREKINAGNPP 127
Query: 97 QCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ L LENV+G + + +I + L G+ + +L+ FGVP +R R ++IA
Sbjct: 128 RVLFLENVRGLKTHDKGNTLKVILATLEELGYAYSFDVLNAKYFGVPQNRERLFIIAWYK 187
Query: 154 PAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSD 213
E F + + + T K K L + L + D P + +Y +SD
Sbjct: 188 KLVDVDEFRFPYGIAEDGSTIYDKKK------LKEGILLTKVSDIFEPEKTMDSQYTISD 241
Query: 214 K 214
K
Sbjct: 242 K 242
>gi|374572064|ref|ZP_09645160.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
gi|374420385|gb|EHQ99917.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
Length = 338
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQ---SFSIEEINAMSPDVILMSPPCQPF 66
++V A+++ SA + N P T L ++I+ SF + + + P V+ PPCQ F
Sbjct: 9 GVDVKVAVEMKPSACLTFAKNHPTTKLLAQDIREVTSFDLPKRDL--PLVVFGGPPCQGF 66
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGF---EGSRSRDLITSMLT 121
+ T Q+ A + +L E + + L + L+ ENV G EG + S L
Sbjct: 67 S-TSNQRTRTRANPSNWLFL-EFLRVVDLLGPEWLVFENVAGIVHTEGGYFLGRLESQLK 124
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR--SPAAHSSEASFCFETSSELMTELPKLK 179
G+R LL+ FG+P RTR++LI R SP + S T + + +LP L+
Sbjct: 125 SRGYRVSSALLNAADFGIPQRRTRFFLIGSREQSPPSLSPPGDPVATTVRDAIWDLPVLR 184
>gi|288926887|ref|ZP_06420787.1| modification methylase HindV (Cytosine-specific methyltransferase
HindV) [Prevotella buccae D17]
gi|288336326|gb|EFC74707.1| modification methylase HindV (Cytosine-specific methyltransferase
HindV) [Prevotella buccae D17]
Length = 313
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRG--RNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+E+V A D A VY++NF +R N+++ SIE I PD+I+ PPCQ F+
Sbjct: 21 GMEIVAAFDNWVDALYVYRNNFSHPAIRADLMNVKA-SIEAIRPFKPDMIIGGPPCQDFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G ++D + R + I I Q ++ENV ++ + + AG+
Sbjct: 80 SAG-KRDEDNGRGDLTVCYAKIISNIKP-QWFVMENVDRILKTQKLQNASEIFHAAGYGL 137
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+L+ GVP R R+ +I K A
Sbjct: 138 TFTVLNAALCGVPQKRKRFVMIGKLGTA 165
>gi|262201418|ref|YP_003272626.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
gi|262084765|gb|ACY20733.1| DNA-cytosine methyltransferase [Gordonia bronchialis DSM 43247]
Length = 342
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMS--PPCQP 65
+++ +D + A++ +K NF +++ +I++ S E+++ + P V L + PCQP
Sbjct: 26 GMQIAAGLDSDPDASATFKRNFKKSSFIEGDIRNVSTEQVSDVVPSGAVTLFAGCAPCQP 85
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSRSRDLITSML---T 121
F+R + D R L + A+ P L +++ENV G + + + S L +
Sbjct: 86 FSRQNGNRSANDPRRNLLREFQRFVLALHPDL--VVIENVPGLQLQSRKGPLDSFLRAIS 143
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAK-----RSPAAHSSEASFCFETSSELMTELP 176
R G+ +L +FGVP R R ++A R P + A T +++ +LP
Sbjct: 144 RDGYAVNVRVLRALEFGVPQERRRLVVLASRIGEPRMPRPTHAIAGRPARTVRQVIGDLP 203
Query: 177 KLKANTCNPL 186
+ +PL
Sbjct: 204 AIADGDVHPL 213
>gi|420197905|ref|ZP_14703625.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIHLM020]
gi|420228144|ref|ZP_14732898.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIH05003]
gi|394265252|gb|EJE09912.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIHLM020]
gi|394295118|gb|EJE38773.1| putative modification methylase HhaI [Staphylococcus epidermidis
NIH05003]
Length = 402
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
V+ A + + +A Y NF L R+I ++EI + DV++ PCQ F+
Sbjct: 34 EFRVMYANEFDKNAQVTYSKNFKDIELDKRDIHDIKVDEIPEV--DVVVGGFPCQAFSIA 91
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + S +C+ +ENVK + + +I L G+
Sbjct: 92 GYRKGFDDHRGDLFFELLRVIKS-KSPECIFIENVKNMVTHDHGNTFKVIKEALVLNGYS 150
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAA 156
+ +L+ +G +P +R R Y++ ++ A
Sbjct: 151 IKWKVLNAKDYGNIPQNRERIYIVGFKNKTA 181
>gi|418028740|ref|ZP_12667292.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691423|gb|EHE91351.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 334
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTG 70
+V A D +A VYK N + G I EI P DV++ PCQPF+ G
Sbjct: 34 LVWANDFEKNAVDVYKENVDERIVLG------DITEIYEQVPETDVLIGGFPCQPFSMMG 87
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF---EGSRSRDLITSMLTRAGF 125
QK D R T L + I+ I + Q L+LENVK + R+ + S+L G+
Sbjct: 88 KQKGFDDERGT-LFFTIQRIIELHEQQPKILVLENVKNLLTHDHGRTFKKMKSILEDLGY 146
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
+L+ + +G+P +R R +++A
Sbjct: 147 IVHAKVLNTSDYGLPQNRRRVFVVA 171
>gi|535137|emb|CAA56493.1| type II DNA-methyltransferase [Bacillus phage phi3T]
Length = 326
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILMSPPCQPFTR 68
E+V A+DI+ +A Y+HNF G ++ I EI+ S DVI PPCQ F+
Sbjct: 36 EIVKALDIDKNAVKAYRHNF------GDYVEQADINEIDIDSLPDTDVIFGGPPCQDFSV 89
Query: 69 TGLQKDI-ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAG 124
G K + AD L + I + + ENVKG R R D + G
Sbjct: 90 AG--KGVGADGERGKLVWRYLEIIERKQPKAFVFENVKGLITKRHRPTFDALIEKFNEIG 147
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +++ +GV R R +++ R+
Sbjct: 148 YEISWEVVNAWDYGVAQKRERVFIVGVRN 176
>gi|397904752|ref|ZP_10505647.1| DNA-cytosine methyltransferase( EC:2.1.1.37 ) [Caloramator
australicus RC3]
gi|397162204|emb|CCJ32981.1| DNA-cytosine methyltransferase [Caloramator australicus RC3]
Length = 338
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
R++ + + V + +I+ S VY NF P ++ I +SI E D++
Sbjct: 25 RIALESLGAKCVFSSEIDESVREVYIENFGDIPYGDIT--QIDEYSIPE-----HDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G Q+ D+R T L + I I + + +ENVK F + ++ ++
Sbjct: 78 GFPCQAFSISGKQRGFEDSRGT-LFFDIARIVKAKKPKIVFMENVKNFASHDNGKTLSVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
S++ G+ F +L+ +G+P R R Y++ R+ A
Sbjct: 137 KSIMEELGYTFYYKVLNAADYGIPQKRERIYMVCFRNDLA 176
>gi|323650698|gb|ADX97433.1| M1.BspACI [Psychrobacillus psychrodurans]
Length = 320
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+ V + DI+ A YK NF +I EEI D++ PCQPF+ G
Sbjct: 26 QCVFSSDIDKYARETYKENFGEE--PSGDITKIKSEEI--PDHDILCAGFPCQPFSIAGK 81
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQ 128
+ D R T L + + I + LLENV G +G ++ D I + L+ G+ +
Sbjct: 82 RLGFEDTRGT-LFFDVARIIKDKRPKAFLLENVAGITSHDGGKTLDTILNTLSELGYERE 140
Query: 129 EFLLSPTQFGVPNSRTRYYLIA 150
L++ +GVP +R R+Y +
Sbjct: 141 WKLMNAKYYGVPQNRNRWYCVG 162
>gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 319
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+V+ A DI+ A Y+ NFP L +IQS I+ N D+I PCQPF+
Sbjct: 24 GFDVIWANDIDKYACITYRSNFPTVELVEGDIQS--IDSNNIPECDIITAGFPCQPFSIA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGF 125
G Q+ + D R L Y I I + + LENVK G ++++ + L G+
Sbjct: 82 GYQRGLNDPR-GRLFYEIVRIVHDKKPKIIFLENVKNLVSHNNGITFKNILNA-LENEGY 139
Query: 126 RFQEFLLSPTQFG-VPNSRTRYYLIA 150
+ +L+ ++G VP +R R Y++
Sbjct: 140 YLKYAVLNSLEYGNVPQNRERVYIVG 165
>gi|110834520|ref|YP_693379.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax
borkumensis SK2]
gi|110647631|emb|CAL17107.1| C-5 cytosine-specific DNA methylase family protein [Alcanivorax
borkumensis SK2]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQP 65
H +V+ A DI A Y NFP T+ Q + EI + S DV++ PCQ
Sbjct: 15 HQAGYDVLMANDILPYAKDFYLANFPETDY-----QVIDVREIQSFPSADVLVGCYPCQG 69
Query: 66 FTRTGLQKDIADARCTALSYLI-ETIPAIPSLQ--CLLLENVKGFEGSRSRDLITSMLTR 122
F++ G ++ ++YL E + A+ ++ ++ENV G + S R L+ S L +
Sbjct: 70 FSQGGARQS-----SRGVNYLYREFVRALKRIKPKAFIVENVSGMQRSDFRHLLNSQLCQ 124
Query: 123 ---AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
AG+R ++ + FGVP R R + RS
Sbjct: 125 FRLAGYRVNYRVIDVSDFGVPQERKRLIFVGVRS 158
>gi|448260666|ref|YP_007348760.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
gi|370343475|gb|AEX26604.1| cytosine-specific methyltransferase [Klebsiella phage KP27]
Length = 303
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E + +I+ A Y N+ N++G F+I+E + D++L PCQ F++
Sbjct: 23 GVECLLTSEIDKHAQQTYADNWGDENIQG---DIFAIDENDVPDHDILLAGFPCQAFSKA 79
Query: 70 GLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGF 125
GL++ + D R T + ++ I A PS+ L ENV + + I +L G+
Sbjct: 80 GLKQGMLDPRGTIIFEILRIIRAKKPSV--LFFENVPQLLTHDKGNTFKTIYRLLQDEGY 137
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
+++ FG+P R R +++ R P S
Sbjct: 138 DIHYQVMNTKDFGLPQRRERVFIVCFRDPVFFS 170
>gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S]
Length = 390
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 36 LRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPS 95
LRG + +E S DV+ PPCQPF+ G + + D R ++ + + +
Sbjct: 60 LRGPEL----LEAAGVDSIDVLSGGPPCQPFSIAGKRLGLDDPRGHLIAEFVRIVDEV-R 114
Query: 96 LQCLLLENVKGFEGSRSRDLI---TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ ENV + S + D++ T L + G+ + +L+ +GVP +R R LIA R
Sbjct: 115 PKAVVFENVPALQTSHNGDVVRATTDALEQLGYGVRRAILNAADWGVPQARKRLILIAVR 174
Query: 153 SPA--------AHSSEASFC---FETSSELMTELPKLKANTC 183
A HS + S + T+S+ + +LP + +
Sbjct: 175 DVAEFSFPPKPTHSGDPSGSLRPYRTASDALWDLPDVNTDAA 216
>gi|148826843|ref|YP_001291596.1| modification methylase HaeII [Haemophilus influenzae PittGG]
gi|148718085|gb|ABQ99212.1| modification methylase HaeII [Haemophilus influenzae PittGG]
Length = 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL AF + V + + + A S+Y+ NF +IN +SP D+
Sbjct: 17 RLGFEAFGCKNVFSSEWDKYAQSMYEVNFGEK----------PFGDINDISPSDIPDHDI 66
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSR 113
+L PCQPF+ G AD R T L + IE I + LLENVK + +
Sbjct: 67 LLAGFPCQPFSIAGKGLGFADTRGT-LFFNIEAILKAKKPKAFLLENVKRLTTHDNGNTF 125
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+I L + G+ +L+ FG+P R R Y++
Sbjct: 126 KVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVG 162
>gi|319776347|ref|YP_004138835.1| cytosine-specific methyltransferase [Haemophilus influenzae F3047]
gi|329123500|ref|ZP_08252064.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
gi|317450938|emb|CBY87164.1| Cytosine-specific methyltransferase [Haemophilus influenzae F3047]
gi|327471082|gb|EGF16537.1| modification methylase HaeII [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL AF + V + + + A S+Y+ NF +IN +SP D+
Sbjct: 17 RLGFEAFGCKNVFSSEWDKYAQSMYEVNFGEK----------PFGDINDISPSDIPDHDI 66
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSR 113
+L PCQPF+ G AD R T L + IE I + LLENVK + +
Sbjct: 67 LLAGFPCQPFSIAGKGLGFADTRGT-LFFNIEAILKAKKPKAFLLENVKRLTTHDNGNTF 125
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+I L + G+ +L+ FG+P R R Y++
Sbjct: 126 KVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVG 162
>gi|12229852|sp|O30868.1|MTH2_HAEAE RecName: Full=Modification methylase HaeII; Short=M.HaeII; AltName:
Full=Cytosine-specific methyltransferase HaeII
gi|2425087|gb|AAB70829.1| HaeII methylase [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL AF + V + + + A S+Y+ NF +IN +SP D+
Sbjct: 17 RLGFEAFGCKNVFSSEWDKYAQSMYEVNFGEK----------PFGDINDISPSDIPDHDI 66
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSR 113
+L PCQPF+ G AD R T L + IE I + LLENVK + +
Sbjct: 67 LLAGFPCQPFSIAGKGLGFADTRGT-LFFNIEAILKAKKPKAFLLENVKRLTTHDNGNTF 125
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+I L + G+ +L+ FG+P R R Y++
Sbjct: 126 KVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVG 162
>gi|68250112|ref|YP_249224.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
gi|68058311|gb|AAX88564.1| modification methylase HaeII [Haemophilus influenzae 86-028NP]
Length = 318
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL AF + V + + + A S+Y+ NF +IN +SP D+
Sbjct: 17 RLGFEAFGCKNVFSSEWDKYAQSMYEVNFGEK----------PFGDINDISPSDIPDHDI 66
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSR 113
+L PCQPF+ G AD R T L + IE I + LLENVK + +
Sbjct: 67 LLAGFPCQPFSIAGKGLGFADTRGT-LFFNIEAILKAKKPKAFLLENVKRLTTHDNGNTF 125
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+I L + G+ +L+ FG+P R R Y++
Sbjct: 126 KVINDKLNKLGYTVYHKVLNTLDFGLPQKRERIYIVG 162
>gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
Length = 380
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++VV A +I+ A + Y+ N P T LR +I E N D++ PPCQ F+
Sbjct: 25 GVDVVWANEIDKDACNTYELNNPDTYLRRGDISEVYEELKNYNGIDLLFGGPPCQGFSVA 84
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGF 125
G + D D R T + ++ + + + ++ENVK + R+ I + G+
Sbjct: 85 G-KMDPTDIRNTLVWNFLDVLKIVKP-KAFVIENVKALGTLKKWENVRERIFKLSNDMGY 142
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
++L+ + FGVP R R + +
Sbjct: 143 SCNAYILNSSHFGVPQKRERIFFVG 167
>gi|386816060|ref|ZP_10103278.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
gi|386420636|gb|EIJ34471.1| DNA-cytosine methyltransferase [Thiothrix nivea DSM 5205]
Length = 432
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRG-RNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+ V + +I+ A Y NF P+ ++ G R F D +L PCQPF+
Sbjct: 30 QCVLSSEIDKFAQETYALNFGEMPQGDIYGIRQFPEF----------DFLLAGFPCQPFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G Q+ D R T L + +E I + LLENV+G + R+ I L G
Sbjct: 80 YAGKQQGFGDTRGT-LFFEVERILREHQPKGFLLENVRGLTTHDKGRTFKTILQHLEALG 138
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + LL+ + FG+P +R R Y++
Sbjct: 139 YGVEYLLLNGSSFGIPQNRVRVYIVG 164
>gi|311742739|ref|ZP_07716548.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM
15272]
gi|311314367|gb|EFQ84275.1| DNA (cytosine-5-)-methyltransferase [Aeromicrobium marinum DSM
15272]
Length = 428
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTG 70
E V A +I+ +A +Y+HN+ N+ + + + P DV+ PCQPF+++G
Sbjct: 30 ECVYASEIDEAAAKIYQHNW---NMPVAGDIVPETDPVVKVPPHDVLAAGFPCQPFSKSG 86
Query: 71 LQKDIADARCT----ALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRA 123
Q+ + +AR T L L E P+I +LLENV+ G R D+I S L
Sbjct: 87 FQRGMDEARGTLFWNILRILEEHRPSI-----VLLENVRNIAGPRHTHEWDVIISSLRDL 141
Query: 124 GFR-------FQEFLLSPTQFGVPNSRTRYYLIA 150
G++ F LL P G P R R +++
Sbjct: 142 GYQVSSTPAVFSPHLLPPWMGGSPQIRERVFIVG 175
>gi|308229532|gb|ADO24181.1| M.ApaI [Acetobacter pasteurianus subsp. pasteurianus]
Length = 349
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E V ++ N A S Y + P +I+S S E + D++ PPCQPF+
Sbjct: 21 GIEPVACVEKNKDAVSTYDAHTPDAEHYCSDIRSISFERYRGLV-DIVFGGPPCQPFSTG 79
Query: 70 GLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---A 123
GL++ ADAR + L E PA L ENV G + +L
Sbjct: 80 GLRRGTADARNMFPEFMRVLKEVRPA-----AFLAENVPGLATRNRVQYLAELLNEFEAL 134
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
GF ++S +GVP R R ++ +
Sbjct: 135 GFNVSWNVVSAADYGVPQKRRRLIIVGMK 163
>gi|409992533|ref|ZP_11275717.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|79835466|gb|ABB52093.1| Mod [Arthrospira platensis]
gi|291569838|dbj|BAI92110.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
gi|409936603|gb|EKN78083.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 345
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 42 QSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLL 101
Q+ I + PDVI+ PPCQPF+ GLQK D+R L I+ I A + +
Sbjct: 72 QTLEIGQDLCNHPDVIIGGPPCQPFSVGGLQKGPRDSR-DGLPIFIDAI-ARYQPEIAIF 129
Query: 102 ENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
ENV+G ++ + + I + L R +R L++ +GVP R R +++A ++ A +
Sbjct: 130 ENVRGMLYKNRQYLEKIVAELERLNYRVDIKLINAVNYGVPQKRERLFVVAYQT-AWNWP 188
Query: 160 EA 161
EA
Sbjct: 189 EA 190
>gi|306824635|ref|ZP_07457980.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304433203|gb|EFM36174.1| DNA methylase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 410
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + A Y+ N P T L GR+I E+I D+I+ PCQ F+
Sbjct: 34 EFRVVYANEFDKYARQTYQLNHPDTYLDGRDIHDVQPEDIPVERVDIIMGGFPCQAFSIA 93
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFR 126
G +K D R L+ I + + +ENVK G + + +I LT +
Sbjct: 94 GYRKGFDDDRGDLFFELLRMIEGRKP-RAIFIENVKNMVGHDHGNTFKVIREALTENNYF 152
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ +L+ +G +P +R R Y++ + EA FE E+
Sbjct: 153 IKWKVLNGKDYGNIPQNRERIYIV-----GFDTKEAYDLFEFPEEI 193
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--------- 54
LS H +EVV AI+ + +A + YK NF L+ + E+IN + P
Sbjct: 17 LSAHNAGVEVVAAIEFDKAAANTYKKNFI---LKDKKPIKLLNEDINLVDPTGLRESLNL 73
Query: 55 -----DVILMSPPCQPFTRTGLQK-DIADARCTALSYLIETIPAIPSLQCLLLENVKGFE 108
D+IL PPCQ F+ + + D R L E + + L+ENV G
Sbjct: 74 KAGELDLILGGPPCQGFSTHRINNAGVNDPRNALLLRYFEFVHEFQP-KAFLVENVAGLL 132
Query: 109 GSRSRDLITSMLTRAGFRFQEF----LLSPTQFGVPNSRTRYYLIAKRS----------P 154
R D + L A E +L+ FGVP +R R ++ R
Sbjct: 133 WKRHEDFLNKFLQLAAKEGYEITFCGILNAKDFGVPQNRKRVFIHGVRKDIKSTVSFPPE 192
Query: 155 AAHSSEASF---CFETSSELMTELPK 177
A H S S C++T+S + +P+
Sbjct: 193 ATHFSPTSGLAPCWKTASTVFEPVPE 218
>gi|294661528|ref|YP_003579981.1| hypothetical protein KP-KP15_gp115 [Klebsiella phage KP15]
gi|292660689|gb|ADE34937.1| hypothetical protein [Klebsiella phage KP15]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 6 NHAFS-LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ AF +E + +I+ A Y N+ N++G F+I+E + D++L PCQ
Sbjct: 18 DKAFGGVECLLTSEIDKHAQQTYADNWGDENIQG---DIFTIDENDVPDHDILLAGFPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGF---EGSRSRDLITSML 120
F++ GL++ + D R T + ++ I A PS+ L ENV + + I +L
Sbjct: 75 AFSKAGLKQGMLDPRGTIIFEILRIIRAKKPSV--LFFENVPQLLTHDKGNTFKTIYRLL 132
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
G+ +++ FG+P R R +++ R P S
Sbjct: 133 QDEGYDIHYQVMNTKDFGLPQRRERVFIVCFRDPVFFS 170
>gi|385871172|gb|AFI89692.1| Cytosine-specific methyltransferase [Pectobacterium sp. SCC3193]
Length = 338
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A DI +A + FP + +R +I + N DV++ PCQ F+ G
Sbjct: 11 KVVFANDILKNACKTLEKYFPESEVRLGDISNIQ----NFPHVDVVVGGYPCQSFSMAGN 66
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFRFQ 128
+K DAR + + I + + ENV G + + + LT +AG++
Sbjct: 67 RKPSGDARTNLYKQFLRVL-NIVRPKYFVAENVSGLQQLGAGSFLEQQLTAYQQAGYQVS 125
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLLS 188
L++ ++GVP SR R ++I R+ CFE K + NP L
Sbjct: 126 YHLVNAREYGVPQSRKRLFIIGVRNDLGQ------CFEFPPATHG-----KPSQKNPHLK 174
Query: 189 RMTLHG--ILD-STHPSGDLYRR 208
HG I D P G+ Y R
Sbjct: 175 PYASHGDAICDLPLWPEGEFYER 197
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-----DVILMSPP 62
A + + I+ + + +Y+ NF T +I S S ++I D+++ PP
Sbjct: 139 AAGVRIAGFIEKDKHISQIYRDNFSSTPQLANDITSLSHKDIEQYKDSIGEIDIVIGGPP 198
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETI----PAIPSLQCL-LLENVKGFEGSRSRDLIT 117
CQ F+ +G ++D +DAR ++ + P I L+ + LL ++K G+ +DLI
Sbjct: 199 CQGFSLSG-KRDKSDARNKLFENYLDFVTVFKPKIALLENVQLLTSMKDENGNHIKDLII 257
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ F ++ +GVP SR R + +A R+
Sbjct: 258 KKFQDLNYKITYFDVNAKDYGVPQSRARVFFLAIRN 293
>gi|119484300|ref|ZP_01618917.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
gi|119457774|gb|EAW38897.1| modification methylase NlaIV [Lyngbya sp. PCC 8106]
Length = 449
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTG 70
E + A +I+ A+ VY NF ++ I +I ++ DV+L PCQ F+ G
Sbjct: 30 ECLLASEIDAEASQVYSQNF-------LHVPEGDIRQIKSLPKHDVLLAGFPCQSFSYAG 82
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRF 127
++ + R T L + I + + L+LENV+G + ++ I + G+ F
Sbjct: 83 KKQGFGEIRGT-LFFEIMRLIDTNQPKVLILENVRGLTTHDHGKTFATIKHEIQLRGYSF 141
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
+F+L+ FG+P +R R Y+I
Sbjct: 142 YQFILNSVNFGLPQNRVRVYMIG 164
>gi|419682527|ref|ZP_14211259.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
gi|380661488|gb|EIB77384.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
Length = 338
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQ-----SFSIE-EINAMSPDVILMSPPC 63
E + ++I+ A+ K+N P N+ +I+ + IE I D++ PPC
Sbjct: 23 GFEHIGLVEIDKHASLTLKYNRPCWNVINEDIEQVVERNLEIEFNIKKGELDLLSGGPPC 82
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
Q F+ G + I D+R T + + + + + L ENVKG + ++ +IT +L
Sbjct: 83 QSFSYAGNRLGIEDSRGTMFYFYAKFLKELQP-KVFLFENVKGLYSHDKGKTFKIITEIL 141
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCF 165
G+R + +L+ +GV R R L+ R + ++CF
Sbjct: 142 KSQGYRIEHKILNAWDYGVAQKRERLILVGIRKDFEN---ITYCF 183
>gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
Length = 367
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTR 68
+ V A +I+ A + Y+ N P T L +++++ IE + D++ PPCQ F+
Sbjct: 25 GIHVEWANEIDKDACNTYETNNPETILAKGDLRNY-IETLKEHRDIDIVFGGPPCQGFSV 83
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAG 124
G + D D R T + ++ + A+ + ++ENVK + R R+ I + + G
Sbjct: 84 AG-KMDPQDERSTLIWSFLDVVKAVKP-KAFVMENVKALATLEKWGRVREEIYRVSSELG 141
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ FLL+ FGVP R R + I
Sbjct: 142 YTCYPFLLNSADFGVPQKRERVFFIG 167
>gi|409991833|ref|ZP_11275061.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937298|gb|EKN78734.1| DNA (cytosine-5-)-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 429
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP-PCQPFTRTGLQKDIA 76
+I+ A VY+ NF T I+ I+++ P IL++ PCQ F+ G +
Sbjct: 38 EIDRDARQVYQANFSET-------PQGDIKTISSLPPHHILLAGFPCQSFSYAGKKAGFG 90
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLS 133
D R T ++ I + Q + ENV+G + ++ + I + G+ F FLL+
Sbjct: 91 DTRGTLFFEILRLIDS-QQPQAFIFENVRGLVTHDQGKTINTIRQKMQERGYSFDLFLLN 149
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAH 157
+ +GVP +R R Y++ + H
Sbjct: 150 SSNYGVPQNRVRAYMMGVLNQTPH 173
>gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 361
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 28/206 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNI---QSFSIEEINAMSPDVILMSPPCQPFTR 68
++V A D+ +A + FP T++R +I QSF D+++ PCQ F+
Sbjct: 34 DIVFANDVVENACKTLGNYFPDTDIRHSDISQIQSFP-------DVDIVVGGYPCQSFSM 86
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGF 125
G +K D R + + + + + + ENV G + + + LT AG+
Sbjct: 87 AGNRKPNNDDRTNLYKHFLRVLETV-RPKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGY 145
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
+ +++ +GVP SR R ++I R+ CFE +E KA NP
Sbjct: 146 QVSYHMVNARAYGVPQSRKRLFIIGVRNDLGQ------CFEFPAETHG-----KATKKNP 194
Query: 186 LLSRMTLHG--ILD-STHPSGDLYRR 208
L HG I D P G+ Y R
Sbjct: 195 HLKPYVSHGEAIRDLPLWPEGEFYER 220
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 29/222 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS---IEEINAMSPDVILMSPPCQPF 66
E + AID T A + N +I FS +E+ S D I+ PPCQ F
Sbjct: 21 GFETILAIDKWTDAIETFNKNHENKVGTTIDIHDFSNEYLEQYKDGSIDGIIGGPPCQGF 80
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
+ G +D D R + + + I + +LENV G E + +D I
Sbjct: 81 SLVG-TRDTNDPRNSLYIEYVRFVSVIKP-KFFVLENVSGLLSLEKGKFKDDIIKRFEGL 138
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE--------TSSELMTEL 175
G+ LL+ + +GVP SR R + + R + F F+ ++S+ +++L
Sbjct: 139 GYNVDYKLLTASDYGVPQSRKRVFFVGLRKDVF--KDEYFNFDNLELEEMVSTSKALSDL 196
Query: 176 PKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLL 217
P+ ++ LD +P + Y++Y+ + +L+
Sbjct: 197 PQATSSKIG-----------LDYINPPENKYQKYMRKNSNLI 227
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE------INAMSPDVILMSPPCQPF 66
+V D++ A ++ NFP + + + +E I D ++ PPCQ F
Sbjct: 45 IVAGNDVDPDAAQTFRLNFPEASFFEGPVSKLAADELLADCGIERGDLDCLVGGPPCQSF 104
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
+ + D R + + + A+ + + L++ENV G +G R D I + L
Sbjct: 105 SHNNHHRSAVDERARLFEHYLTLVGAL-NPKTLVMENVPGILSIDGGRVVDEILASLKEL 163
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
GF LS +FG P R R +++A R AA
Sbjct: 164 GFDAVVGRLSAEEFGTPQLRRRVFIVASRIGAA 196
>gi|421863621|ref|ZP_16295316.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
gi|309378924|emb|CBX22511.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 330
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 14/171 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
EV A + A +Y+ NF T+L + +I +I+ PD+I+ PPCQ
Sbjct: 21 GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTD---EQTAISQISNYQPDLIMGGPPCQD 77
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F+ G ++D+ R L+Y I ++ENV+ + S + +A +
Sbjct: 78 FSSAG-KRDVTLGRAD-LTYHFANIVCSAHPTWFVMENVEQIKKSHILHDVIKQFMQADY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
+L + GVP +RTR++LI K E +F T ++ + E P
Sbjct: 136 GLTSVILDASYCGVPQARTRFFLIGKL-----GEEHNFLTPTLTDRLAEKP 181
>gi|166368724|ref|YP_001660997.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166091097|dbj|BAG05805.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 189
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 24 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESSQEIFAQYNPEIIVGSPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ + G+ E
Sbjct: 81 G-KRDEGLGRANLTLTFAEIVTGV-SPQWFVMENVDRIEKSKILTQAKQIFKSHGYGLTE 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 139 KVINSCYCGVPQTRKRYFLIGK 160
>gi|378776967|ref|YP_005185404.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507781|gb|AEW51305.1| hypothetical protein lp12_1037 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 341
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 48 EINAMSP------DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLL 101
+I +SP D++L PCQ F+ G QK +D R T L + IE I + + LL
Sbjct: 75 DITKISPQDVPDHDILLGGFPCQAFSIIGRQKGFSDTRGT-LFFNIEQILKVKRPRAFLL 133
Query: 102 ENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
ENVK +G R+ +I L G+ +L+ FGVP R R Y++
Sbjct: 134 ENVKQLSTHDGGRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 185
>gi|291569071|dbj|BAI91343.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 429
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP-PCQPFTRTGLQKDIA 76
+I+ A VY+ NF T I+ I+++ P IL++ PCQ F+ G +
Sbjct: 38 EIDRDARQVYQANFSET-------PQGDIKTISSLPPHHILLAGFPCQSFSYAGKKAGFG 90
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLS 133
D R T ++ I + Q + ENV+G + ++ + I + G+ F FLL+
Sbjct: 91 DTRGTLFFEILRLIDS-QQPQAFIFENVRGLVTHDQGKTINTIRQKMQERGYSFDLFLLN 149
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAH 157
+ +GVP +R R Y++ + H
Sbjct: 150 SSNYGVPQNRVRAYMMGVLNQTPH 173
>gi|408410143|ref|ZP_11181386.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
gi|407875697|emb|CCK83192.1| Cytosine-specific methyltransferase [Lactobacillus sp. 66c]
Length = 405
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
VV A + + +A Y+ N P T L GR+I S +EI DVI+ PCQ F+
Sbjct: 32 EFRVVYANEFDKNARITYELNNPETRLDGRDIHDVSPDEIPDC--DVIMGGFPCQAFSIA 89
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G +K D R L++ I A + + +ENVK + + +I L G+
Sbjct: 90 GYRKGFEDERGDLFFELLKMIKA-KKPRVVFVENVKNLVTHDHGNTFKVIREALAENGYF 148
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIA 150
+ +L+ +G VP +R R Y++
Sbjct: 149 IKWKVLNSKDYGNVPQNRERIYMVG 173
>gi|421711967|ref|ZP_16151308.1| modification methylase HaeIII [Helicobacter pylori R030b]
gi|407211459|gb|EKE81327.1| modification methylase HaeIII [Helicobacter pylori R030b]
Length = 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|307149806|ref|YP_003890849.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306986606|gb|ADN18484.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 645
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 38 GRNIQSFSIEEINAMS---PDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIP 94
GR++ +++++ S PD + SPPCQ F+ + Q+ D L + T AI
Sbjct: 68 GRHLIKKPVQDVDFSSLVPPDFLHCSPPCQKFSLSNPQRGETD---NDLELALTTRRAIE 124
Query: 95 SL--QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L Q LENV + S S I L + G++++E +L FGVP R R++L+A
Sbjct: 125 TLKPQVFTLENVVPYAKSLSFQTIKETLEKLGYQYRELILDAADFGVPQCRKRFFLVATN 184
Query: 153 S--PAAHSSEASF---CFETSSELMTELPK 177
+ P + FE + +L+ +LP+
Sbjct: 185 NLIPLELTLPKKLSITWFEATVDLIDDLPE 214
>gi|254445875|ref|ZP_05059351.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198260183|gb|EDY84491.1| DNA-cytosine methyltransferase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 321
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS-PD--VILM 59
R+ E V + +I+ A + Y+ NF + I +I+A PD VI
Sbjct: 20 RIGLERLGGECVFSSEIDRHAAATYERNFGHK-------PAGDITKIDASEVPDHEVICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ +G Q DAR T ++ + A + + LENV + +G ++
Sbjct: 73 GFPCQPFSVSGKQLGFEDARGTLFFEVMRLVSA-KRPKVVFLENVANYVRHQGGKTLKRT 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
ML AG+ + +L+ + +GVP +R R Y++ R
Sbjct: 132 VGMLEEAGYATKWAVLNASDYGVPQARKRLYIVGIRK 168
>gi|54297036|ref|YP_123405.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
gi|53750821|emb|CAH12229.1| hypothetical protein lpp1078 [Legionella pneumophila str. Paris]
Length = 320
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 48 EINAMSP------DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLL 101
+I +SP D++L PCQ F+ G QK +D R T L + IE I + + LL
Sbjct: 54 DITKISPQDVPDHDILLGGFPCQAFSIIGRQKGFSDTRGT-LFFNIEQILKVKRPRAFLL 112
Query: 102 ENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
ENVK +G R+ +I L G+ +L+ FGVP R R Y++
Sbjct: 113 ENVKQLSTHDGGRTFQIIIETLRNLGYTVYSTILNSLDFGVPQKRERTYIVG 164
>gi|445418183|ref|ZP_21434814.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
gi|444760872|gb|ELW85301.1| putative DNA (cytosine-5-)-methyltransferase [Acinetobacter sp.
WC-743]
Length = 293
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 14 VTAIDINTSANSVY--KHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
V A +IN +A Y H + + G I+ N +V+ PCQPF++ G
Sbjct: 37 VFASEINENAVKTYLENHALEKEKMHG---DITLIDPNNIPDHEVLCAGFPCQPFSQAGH 93
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQ 128
+K D R T +++ + A + LENV+G + R+ +I L G+ FQ
Sbjct: 94 KKGFEDVRGTLFFNILKILEA-KQPKAYFLENVRGLLKHDDGRTFSIIKEKLENLGYTFQ 152
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
F++ + +G+P R R ++I + ET EL +LP
Sbjct: 153 SFVVKSSDYGLPQHRPRLFMIGFKDG-----------ETQIELPEKLP 189
>gi|420453683|ref|ZP_14952519.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|420482428|ref|ZP_14981065.1| modification methylase HaeIII [Helicobacter pylori Hp P-2]
gi|420512850|ref|ZP_15011333.1| modification methylase HaeIII [Helicobacter pylori Hp P-2b]
gi|425432873|ref|ZP_18813414.1| modification methylase HaeIII [Helicobacter pylori GAM100Ai]
gi|393069432|gb|EJB70229.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393099662|gb|EJC00244.1| modification methylase HaeIII [Helicobacter pylori Hp P-2]
gi|393157913|gb|EJC58174.1| modification methylase HaeIII [Helicobacter pylori Hp P-2b]
gi|410714596|gb|EKQ72060.1| modification methylase HaeIII [Helicobacter pylori GAM100Ai]
Length = 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|317480905|ref|ZP_07939986.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
gi|316902990|gb|EFV24863.1| C-5 cytosine-specific DNA methylase [Bacteroides sp. 4_1_36]
Length = 441
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L+ E V A +I T ++Y+ N + +I IE+ + D++ PC
Sbjct: 18 LALEKLGCECVFASEIQTELRTLYERN--HGIICHGDINEVDIEK-DIPEHDILCGGFPC 74
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSM 119
QPF++ G QK D L Y I I + + LENV EG+ R +I
Sbjct: 75 QPFSQAGKQKGFGDENRGNLFYKIWDILQCKKPEFVFLENVPNLKSHDEGNTYR-VIHET 133
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
L+R + Q+ ++SP FG+P RTR Y++ +
Sbjct: 134 LSRL-YDIQDDIISPHYFGIPQHRTRIYIVGR 164
>gi|296126560|ref|YP_003633812.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018376|gb|ADG71613.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 311
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 8 AFSLE-VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
AF+ E V A +I+ +A YK NFP T L G + I+E N D++ PCQPF
Sbjct: 17 AFNSENCVFASEIDINARETYKLNFPDTVLEGDITE---IDEKNIPEHDILCAGFPCQPF 73
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE----GSRSRDLITSMLTR 122
+ G +K D R T L + I I + +LLENVK E G+ + +I ++
Sbjct: 74 SVAGYRKGFDDTRGT-LFFDIARIIKYHKPKAILLENVKNLENHDNGNTLKTIINTLRNL 132
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ + L S +P +R R + IA S S ++F F EL
Sbjct: 133 NYYVSYKVLNSAEYSNIPQNRERIF-IAAFSKEKVCSYSNFKFPEPVEL 180
>gi|430377337|ref|ZP_19431470.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
gi|429540474|gb|ELA08503.1| DNA (cytosine-5-)-methyltransferase [Moraxella macacae 0408225]
Length = 615
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLR-GRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V A + ++ A Y+ NF T +I+ + E I D++ PCQPF++ GL+
Sbjct: 29 VFASEKDSHARQTYRKNFDTTQFELNEDIRKIAPEHIP--DHDILCAGFPCQPFSQAGLK 86
Query: 73 K---DIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
K D AD+ L + I I + +LENV+ + ++ I ++L +AG+
Sbjct: 87 KGFQDGADSERGNLFFCIVDILEAKKPKAFILENVRHLVNHDDGKTYATILTLLDKAGYV 146
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCF 165
Q +L + + VP R R +L+ + SS+ SF F
Sbjct: 147 VQHQVLKASDYNVPQHRPRVFLVGFKKDI--SSQISFNF 183
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLR---GRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+VV A DI +A FP +++R NIQSF DV++ PCQ F+
Sbjct: 34 KVVFANDIVENACKTLDKYFPDSDIRLGDISNIQSFPCV-------DVVVGGYPCQSFSM 86
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGF 125
G +K +DAR + + I + + ENV G + + + LT +AG+
Sbjct: 87 AGNRKPDSDARSNLYKQFLRVL-NIVRPKYFVAENVSGLQQLGAGSFLEQQLTAYQQAGY 145
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
+ L++ ++GVP SR R ++I R E F T +L + P LK P
Sbjct: 146 QVSYHLVNAKEYGVPQSRKRLFIIGVRKDLDQYFE--FPLATHGKLSQKNPHLK-----P 198
Query: 186 LLSRMTLHG--ILD-STHPSGDLYRR 208
S HG I D P G+ Y R
Sbjct: 199 YAS----HGDAICDLPLWPEGEFYER 220
>gi|429742796|ref|ZP_19276407.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
gi|429167658|gb|EKY09557.1| DNA (cytosine-5-)-methyltransferase [Neisseria sp. oral taxon 020
str. F0370]
Length = 357
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SR 111
D++L PCQPF++ GL+K D R T + + IE I + LLENVKG +G R
Sbjct: 111 DLLLAGFPCQPFSQAGLKKGFTDTRGT-MFFHIEEIIRQKRPKAFLLENVKGLKGHDKGR 169
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ I L+ G+ +++ F +P +R R Y++
Sbjct: 170 TFKTIYDSLSALGYTVSAKVMAAKDFNLPQNRERIYIVG 208
>gi|386747419|ref|YP_006220627.1| site-specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384553661|gb|AFI05417.1| site-specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 230
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ I EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQINEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENVKG R + ++L +
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLCENVKGMLAKRHEKSVKNILNAFKECNYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VSIHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF------SIEEINAMSPDVILMSPPC 63
EV A++++ A Y+HNFPRT L ++QSF +E D++ PPC
Sbjct: 42 GFEVRAAVELDKYACETYRHNFPRTKLFEGDVQSFLTEGTDHVESFRVKGVDLVFGGPPC 101
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
Q F++ G+++ + D R L I A + L+ENV + LI
Sbjct: 102 QGFSQIGMRR-LDDER-NELYQQYTRIVAKLKPRVFLMENVPNLALMNKGHFKHLILKEF 159
Query: 121 TRAGFRFQEFL-LSPTQFGVPNSRTRYYLIAKR 152
G+ L +S +GVP +R R + R
Sbjct: 160 ADLGYSNTVMLRVSADDYGVPQTRQRVIFVGTR 192
>gi|195867949|ref|ZP_03079946.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|195660345|gb|EDX53605.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
Length = 319
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP--PCQPFTRT 69
++V A +I+ A Y++NF + L +I++ +I PD+ +++ PCQ F+
Sbjct: 26 KIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPNDI----PDIDILNGGFPCQAFSIA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSRSRDLITSMLTRAGFR 126
G QK D R L + I I + + +LLENVK E + +I + L + G+
Sbjct: 82 GYQKGFNDERGN-LFFEIVRIIKVKKPRAILLENVKNLETHDNGNTFKVIKNELEKLGYH 140
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSS 159
+L+ +G VP +R R Y++ S A+ +
Sbjct: 141 VHHKVLNTMDYGNVPQNRERIYIVGFLSKKAYEA 174
>gi|395802256|ref|ZP_10481509.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
gi|395435497|gb|EJG01438.1| DNA-cytosine methyltransferase [Flavobacterium sp. F52]
Length = 328
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
N F LE D A Y++NF + G ++ ++++N + D++ PC
Sbjct: 21 FENAGFKLEWANEFD--KKACVTYRNNFEHKLIEG-DVMQLDVKKLNKI--DILTAGFPC 75
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSML 120
QPF+ G +K D+R +++ I + + + LENVK +G + +I +
Sbjct: 76 QPFSLAGHRKGFKDSRGNHFFKILDFIDEMRP-KVVFLENVKNLKGHDKGNTMKVIQREI 134
Query: 121 TRAGFRFQEFLLSPTQFG-VPNSRTRYYLIA 150
+ + F +L+ FG +P++R R ++IA
Sbjct: 135 KKRNYTFDSAILNTKDFGNIPHNRERIFMIA 165
>gi|376002334|ref|ZP_09780170.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
gi|375329328|emb|CCE15923.1| Modification methylase M.Asp8005ORF1636 (Cytosine-specific
methyltransferase M.Asp8005ORF1636) (prototype M.HgiCI)
[Arthrospira sp. PCC 8005]
Length = 429
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP-PCQPFTRTGLQKDIA 76
+I+ A VY+ NF T I+ I+++ P IL++ PCQ F+ G +
Sbjct: 38 EIDRDARQVYQANFSET-------PQGDIKTISSLPPHHILLAGFPCQSFSYAGKKAGFG 90
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLS 133
D R T ++ I + Q + ENV+G + ++ + I + G+ F FLL+
Sbjct: 91 DTRGTLFFEILRLIDS-QQPQAFIFENVRGLVTHDQGKTINTIRQKMQDRGYSFDLFLLN 149
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAH 157
+ +GVP +R R Y++ + H
Sbjct: 150 SSNYGVPQNRVRAYMMGVLNQTPH 173
>gi|400292323|ref|ZP_10794277.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
gi|399902570|gb|EJN85371.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
Length = 364
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
+ A++++ A + Y+ FP+T++ IQ + E DV++ PPCQ F+ G ++
Sbjct: 32 IAAVEMDPEAAASYRATFPKTDVYAGAIQDWLAEGTIPAGVDVVVGGPPCQGFSTLG-KR 90
Query: 74 DIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGS-RSRDLITSMLTRAG-----FR 126
D DAR + I A P + ++ENV F S + RD + + TR G +
Sbjct: 91 DAEDARNRLWEQYAQVIQRARP--KYFVVENVPAFGKSPQYRDFLAA--TRPGEFLEDYS 146
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
F +L+ +G P +R R LI R
Sbjct: 147 FDFRVLNAADYGAPQARRRAVLIGHR 172
>gi|171920707|ref|ZP_02931926.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185179015|ref|ZP_02964765.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024024|ref|ZP_02996783.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518336|ref|ZP_03003849.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|188524309|ref|ZP_03004347.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198273488|ref|ZP_03206024.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225550923|ref|ZP_03771872.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
gi|225551062|ref|ZP_03772008.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|171903447|gb|EDT49736.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209104|gb|EDU06147.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188019052|gb|EDU57092.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188997975|gb|EDU67072.1| cytosine-specific methyltransferase NlaX [Ureaplasma urealyticum
serovar 11 str. ATCC 33695]
gi|195660089|gb|EDX53469.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|198250008|gb|EDY74788.1| cytosine-specific methyltransferase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|225378877|gb|EEH01242.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|225380077|gb|EEH02439.1| DNA (cytosine-5-)-methyltransferase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
Length = 319
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP--PCQPFTRT 69
++V A +I+ A Y++NF + L +I++ +I PD+ +++ PCQ F+
Sbjct: 26 KIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPNDI----PDIDILNGGFPCQAFSIA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSRSRDLITSMLTRAGFR 126
G QK D R L + I I + + +LLENVK E + +I + L + G+
Sbjct: 82 GYQKGFNDERGN-LFFEIVRIIKVKKPRAILLENVKNLETHDNGNTFKVIKNELEKLGYH 140
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSS 159
+L+ +G VP +R R Y++ S A+ +
Sbjct: 141 VHHKVLNTMDYGNVPQNRERIYIVGFLSKKAYEA 174
>gi|387760813|ref|YP_006067790.1| DNA methylase [Streptococcus salivarius 57.I]
gi|339291580|gb|AEJ52927.1| DNA methylase [Streptococcus salivarius 57.I]
Length = 373
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDI 75
A + + A Y+ N+P T+L R+I + ++I A DVI+ PCQ F+ G +K
Sbjct: 3 ANEFDKYARQTYRLNYPNTHLDSRDIHAVQPKDIPAERVDVIMGGFPCQAFSIAGYRKGF 62
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQEFLL 132
D R L+ I + + +ENVK G + + +I LT + + +L
Sbjct: 63 DDDRGDLFFELLRMIEG-RKPRAIFIENVKNMVGHDHGNTFKVIREALTENNYFIKWKVL 121
Query: 133 SPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ +G +P +R R Y++ + A+ F F L T L
Sbjct: 122 NGKDYGNIPQNRERIYIVGFDTKEAYD---VFEFPEEVNLTTSL 162
>gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 420
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTGLQ 72
+ + +I+ A Y NF I I+ I+ +S + IL PCQPF+ G
Sbjct: 32 ILSSEIDYKACETYALNFDE-------IPQGDIKNIDKISSFNFILAGSPCQPFSYAGKH 84
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
+ D R T L + +E I LLENV+G + R+ I + L + +
Sbjct: 85 QGFGDTRGT-LFFEVERILDKYKPDGFLLENVRGLVTHDKGRTLKTIINKLNDLDYSVEY 143
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRS 153
FLL+ + F VP +R R Y++ K+
Sbjct: 144 FLLNSSNFNVPQNRVRIYIVGKKG 167
>gi|288559284|ref|YP_003422770.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541994|gb|ADC45878.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 339
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILM 59
RL+ + + V + DI+ AN Y NF I EI A D++
Sbjct: 43 RLAFESVGGKCVFSSDIDKWANETYYMNFGE-------YPHGDISEIPANQIPDHDILCA 95
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G +K D R T L + IE I Q LLENVKG + ++ +I
Sbjct: 96 GFPCQPFSIGGYRKGFCDTRGT-LFFEIERILKAKKPQMFLLENVKGLTNHDKGKTFKVI 154
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L G+ +L+ +GVP +R R +++
Sbjct: 155 KESLWNLGYSIFYQVLNSKDYGVPQNRERIFIVG 188
>gi|427718054|ref|YP_007066048.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350490|gb|AFY33214.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 432
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRG-RNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V + +INT A VY+ NF L R I S EI +L PCQ F+ G +
Sbjct: 34 VLSSEINTDAQLVYQENFGHKPLGDVRLIDSLPEHEI-------LLAGFPCQSFSHAGKK 86
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
D R T L + I + + + ENV+G + ++ I + + G+ F
Sbjct: 87 AGFGDIRGT-LFFEIARLLDSYKPKAFIFENVRGLYSHDEGKTLATIQHEIQKRGYSFHA 145
Query: 130 FLLSPTQFGVPNSRTRYYLIA 150
FLL+ FG+P +R R YL+
Sbjct: 146 FLLNSANFGLPQNRVRIYLVG 166
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ A++I+ + ++ NFP + +++ S EEI +S DV+ PPC
Sbjct: 51 GFDVLAAVEIDPVHCATHEFNFPFWQIFCKSVVEISGEEIRKLSKIKNQEIDVLFGGPPC 110
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G ++ + D R + + + I + + + ++LENVKG + R+ I +++
Sbjct: 111 QGFSLIG-KRLLDDPRNSLVFHYIRLVLELQP-KFVVLENVKGMTVGKHREFILEVISAF 168
Query: 123 AGFRFQEF----LLSPTQFGVPNSRTRYYLIAKRS 153
A ++ + +L+ +GVP +R R +L+A R
Sbjct: 169 AAINYKVYQDYQVLNAANYGVPQNRERLFLLACRQ 203
>gi|421712133|ref|ZP_16151472.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407210695|gb|EKE80571.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 313
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL L+ V +IN A Y+ F T+ + E++ ++P DV
Sbjct: 11 RLGLERCHLKCVGHAEINHEALRTYELFFKDTH---------NFEDLMRINPNDLPDFDV 61
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD-- 114
++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 62 LVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETF 120
Query: 115 -LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH------SSEASFCFET 167
I L AG+ +L+ T F + R R Y++ R H +CFE
Sbjct: 121 KTIIKALQEAGYTTHYQILNSTDFQLAQKRERLYIVGFRKDLKHPFNFPLGLANDYCFEN 180
>gi|385324950|ref|YP_005879389.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
gi|261393337|emb|CAX50970.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
Length = 330
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
EV A + A +Y+ NF T+L + +I +I+ PD+I+ PPCQ
Sbjct: 21 GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTD---EQTAISQISNYQPDLIMGGPPCQD 77
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F+ G ++D+ R L+Y I ++ENV+ + S + +A +
Sbjct: 78 FSSAG-KRDVTLGRAD-LTYHFANIVCSAHPTWFVMENVEQIKKSHILHDVIKQFMQADY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP +RTR++LI K
Sbjct: 136 GLTSVILDASYCGVPQARTRFFLIGK 161
>gi|300905017|ref|ZP_07122835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|301305818|ref|ZP_07211903.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|415865124|ref|ZP_11538058.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|424757713|ref|ZP_18185448.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|300403166|gb|EFJ86704.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 84-1]
gi|300838908|gb|EFK66668.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 124-1]
gi|315254408|gb|EFU34376.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 85-1]
gi|421949161|gb|EKU06151.1| putative DNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 354
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMS-- 60
H +++V +D + A S ++ NFP+ +I+ IN + D IL S
Sbjct: 29 HQAGMDIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNAINKLVKKHRNDYILFSGC 88
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGFEGSRSRD----L 115
PCQP+++ K D R L + +P + +ENV G + + +
Sbjct: 89 APCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYMPDF--IFVENVPGMQKFNKNEGTFMM 146
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSE 170
ML+ G+ ++ +GVP +R R LIA + P+ + + T +
Sbjct: 147 FLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASKDFYVALPSPTHGVGNTPYSTVKD 206
Query: 171 LMTELPKLKA 180
+ LPK++A
Sbjct: 207 WIANLPKIEA 216
>gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHKTSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFR 164
>gi|419881089|ref|ZP_14402439.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|421776835|ref|ZP_16213437.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|432850040|ref|ZP_20081021.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
gi|388366340|gb|EIL30076.1| putative DNA methylase [Escherichia coli O111:H11 str. CVM9545]
gi|408458217|gb|EKJ82006.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli AD30]
gi|431400932|gb|ELG84290.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE144]
Length = 346
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMS-- 60
H +++V +D + A S ++ NFP+ +I+ IN + D IL S
Sbjct: 21 HQAGMDIVFGLDFDVDAASSFRANFPQAAFINSDIRLIDNNAINKLVKKHRNDYILFSGC 80
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGFEGSRSRD----L 115
PCQP+++ K D R L + +P + +ENV G + + +
Sbjct: 81 APCQPYSKQNSNKKNDDPRLDLLKEFSRFVEHYMPDF--IFVENVPGMQKFNKNEGTFMM 138
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSE 170
ML+ G+ ++ +GVP +R R LIA + P+ + + T +
Sbjct: 139 FLEMLSSKGYSVDYKVMPAAWYGVPQTRERLVLIASKDFYVALPSPTHGVGNTPYSTVKD 198
Query: 171 LMTELPKLKA 180
+ LPK++A
Sbjct: 199 WIANLPKIEA 208
>gi|416241717|ref|ZP_11632930.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
Length = 458
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I+ N S D++L PCQPF+ +G + D L + + I + LLENV
Sbjct: 171 QIDANNLPSHDLLLAGFPCQPFSYSGKTEGFEDKTRGTLFFDVLRILENKQPKFALLENV 230
Query: 105 KGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA 161
KGF + ++ D+ L AG+ +L+ +GVP R R+Y +A R S
Sbjct: 231 KGFKSHDKGKTMDIALKALDEAGYNTYWTILNSYDYGVPQFRERWYCVAIRKD---SDNG 287
Query: 162 SFCFETSSELMTEL 175
F F + + T+L
Sbjct: 288 RFEFPKNRDRTTKL 301
>gi|313669224|ref|YP_004049508.1| DNA modification methylase [Neisseria lactamica 020-06]
gi|313006686|emb|CBN88152.1| putative DNA modification methylase [Neisseria lactamica 020-06]
Length = 330
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
EV A + A +Y+ NF T+L + +I +I+ PD+I+ PPCQ
Sbjct: 21 GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTD---EQTAISQISNYQPDLIMGGPPCQD 77
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F+ G ++D+ R L+Y I ++ENV+ + S + +A +
Sbjct: 78 FSSAG-KRDVTLGRAD-LTYHFANIVCSAHPTWFVMENVEQIKKSHILHDVIKQFMQADY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP +RTR++LI K
Sbjct: 136 GLTSVILDASYCGVPQARTRFFLIGK 161
>gi|399925718|ref|ZP_10783076.1| DNA-cytosine methyltransferase [Myroides injenensis M09-0166]
Length = 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V A + + +A + YK NF ++G F+I+ S DV+ PCQPF+ G +
Sbjct: 33 VSWANEFDKNACTTYKKNFKHDLIQG---DVFAIDLKKLSSIDVLAAGFPCQPFSVAGYR 89
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R ++E + I + + LENVK + + +I + L + FQ
Sbjct: 90 KGFDDHRGNHFFRILEFVDTIRP-KVVFLENVKNLKTHDKGNTFKVIENSLRERNYSFQA 148
Query: 130 FLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+L+ +G +P++R R +++A +E F F EL
Sbjct: 149 QVLNTKSYGNIPHNRERIFMVAFDLSLFPDAEKQFVFPEEEEL 191
>gi|261401478|ref|ZP_05987603.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
gi|269208450|gb|EEZ74905.1| modification methylase HindV [Neisseria lactamica ATCC 23970]
Length = 330
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
EV A + A +Y+ NF T+L + +I +I+ PD+I+ PPCQ
Sbjct: 21 GFEVCAAFEKWDKAIDIYRKNFNHPVYETDLTD---EQTAISQISNYQPDLIMGGPPCQD 77
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F+ G ++D+ R L+Y I ++ENV+ + S + +A +
Sbjct: 78 FSSAG-KRDVTLGRAD-LTYHFANIVCSAHPTWFVMENVEQIKKSHILHDVIKQFMQADY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP +RTR++LI K
Sbjct: 136 GLTSVILDASYCGVPQARTRFFLIGK 161
>gi|428221921|ref|YP_007106091.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427995261|gb|AFY73956.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 441
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE------INAMSPDVILMSPPC 63
+V+ +++IN +++K NFP ++ +++ S +E IN DV+ PC
Sbjct: 27 GFDVLASVEINPVHCAIHKFNFPHWSVICQSVTDISGDEIRTKSTINNAEIDVVFGGSPC 86
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G ++ + D R +S+ + + + + + +LENVKG + R + ++
Sbjct: 87 QGFSLIG-KRALDDPRNALVSHFLRLVTEL-NPKYFVLENVKGLTIGKHRQFLAEVIAEF 144
Query: 124 GFRFQEFL-----LSPTQFGVPNSRTRYYLIAKRS 153
E L L+ + +GVP SR R +LI R
Sbjct: 145 ESHNYEVLRDYRVLNASHYGVPQSRDRLFLIGCRQ 179
>gi|386748451|ref|YP_006221659.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554693|gb|AFI06449.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 319
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL +L+ V +IN A Y+ F TN G +Q + + DV++ P
Sbjct: 15 RLGLEQCNLKCVGHAEINREALRTYELFFKDTNNFGDLMQ---VNPNDLPHFDVLISGFP 71
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM--- 119
CQ F+ G +K D R T + LI+ I I +C LLENVKG + +M
Sbjct: 72 CQAFSINGKRKGFDDTRGTIIYGLID-ILKIKQPKCFLLENVKGLINHNKKATFNTMIKA 130
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH------SSEASFCFE 166
L G+ +L+ F + +R R Y++ R H +CFE
Sbjct: 131 LQEVGYTTYYEILNSADFKLAQNRERIYIVGFRKDLKHHFVFPLGRPNDYCFE 183
>gi|440752731|ref|ZP_20931934.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
gi|440177224|gb|ELP56497.1| hypothetical protein O53_1103 [Microcystis aeruginosa TAIHU98]
Length = 728
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMS 60
RL+ + + V + +I+ + VY +NF + ++I+ +I ++ PD V+
Sbjct: 19 RLAFESVGYDCVYSCEIDENCQKVYFNNF--QEIPDQDIRKIAIHDL----PDFEVLTAG 72
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQPF+ +G + D R T ++ E + + + +LLENVK + ++ D+I
Sbjct: 73 FPCQPFSISGKRAGFRDTRGTLFFHICEIV-ELKKPKIILLENVKHLIHLDKGKNLDIIL 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ LL+ FGVP +R R +IA ++
Sbjct: 132 HSLEELGYLVDYKLLNAKNFGVPQNRERIIIIATQN 167
>gi|433603053|ref|YP_007035422.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407880906|emb|CCH28549.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A++ + A + Y NF ++R +I + E I + D+I+ PPCQ F+ G +
Sbjct: 27 VMAVEWDLRAAATYAANFGEDHMRWSDIAAIPDESIPEV--DLIVGGPPCQGFSNLG-SR 83
Query: 74 DIADARCTAL-SYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLL 132
D+ D R + YL A P + ++ENV F S L+ + G+ +L
Sbjct: 84 DVNDPRNSLWREYLRFVRTARP--KVFVIENVDRFLSSTEFALLQA--ETEGYELSSGIL 139
Query: 133 SPTQFGVPNSRTRYYLIAKR---SPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSR 189
FGVP R R +I R P + + T +++T LP+L T P +
Sbjct: 140 LAADFGVPQRRRRAIVIGSRIGPIPLPAPTHPRGSWHTVRDVLTGLPELPTTTALPDSTV 199
Query: 190 MTLHGILDSTHPSGDLY 206
+ H S DL+
Sbjct: 200 EFFGQTMPGRHKSPDLH 216
>gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|397661933|ref|YP_006502633.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|394350112|gb|AFN36026.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|399115775|emb|CCG18578.1| cytosine-specific methyltransferase [Taylorella equigenitalis
14/56]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 46 IEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK 105
I+E + D++ PCQ F+ +G + D+R T L + + I + + LENVK
Sbjct: 64 IDECTIPNHDILCAGFPCQAFSISGKRLGFEDSRGT-LFFDVVRIAKSKRPKVIFLENVK 122
Query: 106 GF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
F +G R+ ++ L R G+ F +L+ +G+P SR R +++A R H
Sbjct: 123 NFAKHDGGRTIRIVKESLLRLGYSFDWKVLNSCDYGIPQSRARIFMVAFREDLKHQ 178
>gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409247997|ref|YP_006888689.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 28/206 (13%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNI---QSFSIEEINAMSPDVILMSPPCQPFTR 68
++V A D+ +A + FP T++R +I QSF D+++ PCQ F+
Sbjct: 34 DIVFANDVVENACKTLGNYFPDTDIRHGDISQIQSFP-------DVDIVVGGYPCQSFSM 86
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGF 125
G +K D R + + + I + + ENV G + + + LT AG+
Sbjct: 87 AGNRKPNNDDRTNLYKHFLRVLETI-HPKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGY 145
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
+ +++ +GVP SR R ++I R+ S E F ET KA NP
Sbjct: 146 QVSYHMVNARAYGVPQSRKRLFIIGVRNDLGQSFE--FPAETHG---------KATKKNP 194
Query: 186 LLSRMTLHG--ILD-STHPSGDLYRR 208
L HG I D P G+ Y R
Sbjct: 195 HLKPYVSHGEAIRDLPLWPEGEFYER 220
>gi|82752078|ref|YP_417819.1| DNA modification methylase [Staphylococcus aureus RF122]
gi|82657609|emb|CAI82057.1| DNA modification methylase [Staphylococcus aureus RF122]
Length = 402
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
VV A + + +A Y++NF +L R+I EI MS DVI+ PCQ F+ G Q
Sbjct: 37 VVYANEFDKNAQITYENNFNNVSLDCRDIHDVKTSEI-PMS-DVIVGGFPCQAFSIAGYQ 94
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
K D R L+ I S Q + +ENVK + + +I LT G+ +
Sbjct: 95 KGFEDERGDLFFELLRFINE-KSPQAIFIENVKNMVTHDHGNTFKVIKEALTLNGYFIKW 153
Query: 130 FLLSPTQFG-VPNSRTRYYLIA 150
+L+ +G +P +R R Y++
Sbjct: 154 KVLNAKDYGDIPQNRERIYIVG 175
>gi|420484211|ref|ZP_14982837.1| modification methylase HaeIII [Helicobacter pylori Hp P-3]
gi|420514572|ref|ZP_15013043.1| modification methylase HaeIII [Helicobacter pylori Hp P-3b]
gi|393101078|gb|EJC01651.1| modification methylase HaeIII [Helicobacter pylori Hp P-3]
gi|393156718|gb|EJC56981.1| modification methylase HaeIII [Helicobacter pylori Hp P-3b]
Length = 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYG 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|209554428|ref|YP_002284952.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541929|gb|ACI60158.1| DNA-cytosine methyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 319
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP--PCQPFTRT 69
++V A +I+ A Y++NF + L +I++ +I PD+ +++ PCQ F+
Sbjct: 26 KIVWANEIDRDACKTYRYNFGDSYLVEGDIKNIGPNDI----PDIDILNGGFPCQAFSIA 81
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSRSRDLITSMLTRAGFR 126
G QK D R L + I I + + +LLENVK E + +I + L + G+
Sbjct: 82 GYQKGFNDERGN-LFFEIVRIIKVKKPRAILLENVKNLETHDNGNTFKVIKNELEKLGYH 140
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHS 158
+L+ +G VP +R R Y++ S A+
Sbjct: 141 VHHKVLNTMDYGNVPQNRERIYIVGFLSKKAYE 173
>gi|427739200|ref|YP_007058744.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374241|gb|AFY58197.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 348
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 10/196 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVI--LMSPPCQPFT 67
V+ A + + S Y+ N P T L R+I+ ++I PD I + PPCQ ++
Sbjct: 21 GFNVIWANEYDKSIWDTYEFNHPNTQLDKRDIRKIVPDDI----PDCIGIIGGPPCQSWS 76
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AG 124
G Q+ I D+R I + L L ENV G + T++L+ AG
Sbjct: 77 EAGAQRGIDDSRGRLFFDYIRILKEKKPL-FFLAENVGGILAKKHDRAFTNILSHFKDAG 135
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+ LL+ F VP R R +I R + E L + +K
Sbjct: 136 YEVTYQLLNAADFLVPQDRKRVIIIGYREDMGGTFEFPRAINNQLTLQNAIYDIKDIEAI 195
Query: 185 PLLSRMTLHGILDSTH 200
+ S+M I+ H
Sbjct: 196 AIDSKMNQSNIVIPNH 211
>gi|427715942|ref|YP_007063936.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427348378|gb|AFY31102.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
A+ S H F ++ A+S + +TNL+G Q E VI+
Sbjct: 37 AQGFSTHGFEMD----------ADSCTTY---QTNLKGNCTQIVLTPETELPLAKVIIGG 83
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG--FEGSRSRDLITS 118
PPCQPF+ G QK + D+R I + + + LLENV+G ++ D I
Sbjct: 84 PPCQPFSVGGNQKGLQDSR-DGFPIFINAVKKL-CPEIWLLENVRGLLYKNRWYLDEIVQ 141
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ + LL+ FGVP +R R ++ +
Sbjct: 142 SLQNLGYIVEWKLLNAVDFGVPQNRERLIVVGHKG 176
>gi|223999981|ref|XP_002289663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974871|gb|EED93200.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 533
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 39/155 (25%)
Query: 37 RGRNIQSFSIEEINAMSPDVILMSPPCQPFTR--TGLQKDIADARCTALSYLIETIPAIP 94
R I+ + +E+ + S V MSPPCQP TR + K++ D R + +L + +
Sbjct: 117 RQTPIERITQQELESHSAIVWCMSPPCQPHTRQHSNQHKELEDPRSKSFLHLCHVLSVME 176
Query: 95 --SLQCL-LLENVKGFEGSR----------------------------------SRDLIT 117
SL CL LLENV GFE S S +
Sbjct: 177 EDSLPCLILLENVVGFERSWMSACATADASSGDSNEADQHQPSTQQSQESEPSGSFQMWR 236
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L + ++ F L PT F +PN+R RYY +A R
Sbjct: 237 KVLAQREYQVGHFHLDPTHFRLPNNRPRYYCVAFR 271
>gi|427713211|ref|YP_007061835.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
gi|427377340|gb|AFY61292.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 14 VTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
V + +I+ A Y NF P+ ++R + EI D +L PCQPF+ G
Sbjct: 32 VLSSEIDRKAKETYALNFNEVPQGDIR-------QVSEIPKF--DFMLAGFPCQPFSHAG 82
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRF 127
QK D R T L + IE I + LLENV+G + R+ I L + G++
Sbjct: 83 KQKGFGDTRGT-LFFEIERILEQCQPKGFLLENVRGLTTHDRGRTFQTILHSLEKLGYKT 141
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
LL+ + F + +R R Y+I
Sbjct: 142 NYLLLNSSNFSLAQNRVRIYIIG 164
>gi|386820986|ref|ZP_10108202.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
gi|386426092|gb|EIJ39922.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
Length = 461
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQP 65
H E V A +++ + +VY+ N+ +G +I+ +EI ++ P D++ PCQP
Sbjct: 23 HELGHECVFASELDPTLRNVYQANW-GIEAQG-DIKRIVEKEIESIPPHDILCAGFPCQP 80
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDLITSMLTR 122
F++ G Q D R T I I A + +LENV K + + + + + L+
Sbjct: 81 FSKAGKQLGRDDDRGTLFDE-IAKILAFRKPKFFILENVPFIKQHDNEETWNYMHNELSN 139
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
G+ + SP FGVP R R +++ H F F+ E T L
Sbjct: 140 LGYEVDHQVYSPQDFGVPQHRKRIFIVGSLIGLDH-----FSFDEIDEQKTSL 187
>gi|355575378|ref|ZP_09044916.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817688|gb|EHF02187.1| hypothetical protein HMPREF1008_00893 [Olsenella sp. oral taxon 809
str. F0356]
Length = 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF--SIEEINAMSPDVILMSPPCQPFTRT 69
+V A + A VY+ NF T + +++ S+E+I PD+I+ PPCQ F+
Sbjct: 32 DVSAAFEFWKPAIDVYRANFSHTVVE-QDLSKVDESVEKIRTYGPDIIIGGPPCQDFSTA 90
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G Q + ++ Y I +P + ++ENV + S + AG+ +
Sbjct: 91 GYQDETRGRAILSVCYARIVIAVMP--RYFVMENVATIRNTESFRKVIVTFKEAGYGLTQ 148
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRS 153
+L+ GVP +R R +++ + S
Sbjct: 149 KVLNAAYCGVPQTRKRMFVVGELS 172
>gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
Length = 372
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTR 68
+ ++ + +A + + NFP T + +++ EI A D++ PPCQPF+
Sbjct: 25 GFQAAALVEFDKNACATLRANFPDTPVIEGDVRGVDWSEIAAPGETDLVAGGPPCQPFSL 84
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFEGSRSRDLITSMLTR---- 122
G Q+ AD R + E + A+ L + L+ENV+G R D +L R
Sbjct: 85 AGSQRGEADER----DMIPEFVRAVQGLRPKAFLMENVRGLLSPRHADYYRRVLERLAEP 140
Query: 123 -AGFRF--QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
G R+ L+ +GVP R R +I R + F F +
Sbjct: 141 ALGLRYTVTPNLVCAADYGVPQQRWRVLVIGIRE---DQNPEGFAFPEPTH--------- 188
Query: 180 ANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLL 217
+ +L S + +G+ + R+ V + D L
Sbjct: 189 -----------SFEALLHSQYVTGEYWHRHPVPEDDRL 215
>gi|228469904|ref|ZP_04054843.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
gi|228308539|gb|EEK17327.1| cytosine-specific methyltransferase NlaX [Porphyromonas uenonis
60-3]
Length = 395
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRT--NLRGRNIQSFSIEEINAMSP---DVIL 58
L+ H+ + V A + + A Y+ N+ + L R + + I +++ S D++
Sbjct: 48 LAMHSVGAQCVFASEWDQYARQTYEANYRKLAPELFSRGLFAGDITKVDPASIPPFDILC 107
Query: 59 MSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGF----EGS 110
PCQPF+ GL++ D R T + + + + L LENV+G +G+
Sbjct: 108 AGFPCQPFSVAGLRRGFEDTRGTLFFNIANIVKSKIEEGNPPKVLFLENVRGLRTHDKGN 167
Query: 111 RSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
R +I + L G+R+ +L+ FGVP +R R +++A + F + +E
Sbjct: 168 TLR-VILNTLEELGYRYSYEVLNAKYFGVPQNRERLFIVAWSKDLISADRFLFPYGIDAE 226
Query: 171 LMTELPKLKANTC 183
T K A C
Sbjct: 227 GNTIYDKQMAKRC 239
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM--SPDVILMSPPCQPFT 67
++ ID N A ++HNF + + +I +F +I DVI+ PPCQ F+
Sbjct: 26 GFDIAGGIDFNEYATITFQHNFKKAKVHNIDITTFPDSQIEEEYGDVDVIVGGPPCQGFS 85
Query: 68 RTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
QK++ D R I + I + +++ENV+G + + + I +L
Sbjct: 86 SANRWQKEMEDPRNKLFFEYIRFVQKI-HPKVIMIENVRGLLTRDNGYAIERIKEILGAE 144
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L +++GVP +R R ++ R
Sbjct: 145 EYNITYQVLDASEYGVPQNRKRAIIVGVRK 174
>gi|407715400|ref|YP_006836680.1| Modification methylase HaeIII [Cycloclasticus sp. P1]
gi|407255736|gb|AFT66177.1| Modification methylase HaeIII [Cycloclasticus sp. P1]
Length = 363
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 6/146 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
V A + + Y+ NFP T L ++I+ ++EI D I+ PPCQ ++
Sbjct: 21 GFNVTWANEFDKDIWETYEKNFPHTELNKKSIRDVELDEIPEC--DGIIGGPPCQSWSEA 78
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRAGFR 126
G + I D R I + + L ENV G R RD I + +G+
Sbjct: 79 GKLRGIKDKRGQLFFEFIRILRD-KKPKFFLAENVSGMLAPRHRDAIKYIQELFKESGYT 137
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
LL+ + + V R R + I R
Sbjct: 138 LSFKLLNASDYWVAQDRKRVFFIGYR 163
>gi|328947611|ref|YP_004364948.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447935|gb|AEB13651.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMSPP 62
HA E AI+ S Y N P ++ +I++ S E+I P D++ P
Sbjct: 20 HAAGFETKVAIEFIKSCVDTYSKNHPEVHVIHSDIRNVSKEQILPFIPKGGIDLVTSGMP 79
Query: 63 CQPFTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE----GSRSRDLIT 117
C+ F+ G + D R I I I + + +L ENV S +LI
Sbjct: 80 CETFSTAGNTSRSFYDDRQFLFREGIR-IAEIVNAKLILFENVPAITTKTVSKDSNELIV 138
Query: 118 SMLTR----AGF-RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
S+L AG+ +EF+L T FGVP +R R++++A ++P S
Sbjct: 139 SVLKEELKEAGYGNLKEFVLCATDFGVPQTRKRFFILASKNPTTELS 185
>gi|444375291|ref|ZP_21174586.1| site-specific DNA methyltransferase [Helicobacter pylori A45]
gi|443620139|gb|ELT80590.1| site-specific DNA methyltransferase [Helicobacter pylori A45]
Length = 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
Length = 468
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-----DVILMSPP 62
A V ++++ +Y+ NFP + G +I +I DVI+ PP
Sbjct: 135 AAGFNVRGFLELDPGLRKIYRLNFPNSFEMGGDITQIQDAKIKNYKSLIGDIDVIIGGPP 194
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCL----LLENVKGFEGSRSRDLIT 117
CQ F+ +G ++D+ D R T + + + A P + + LL ++K EG+ + I
Sbjct: 195 CQGFSLSG-KRDVNDPRNTLFKHYLRFVDAFRPKIAIMENVRLLSSMKNSEGNLVKCDIE 253
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
S G+ Q F ++ +GVP R R +A R+
Sbjct: 254 SDFHNHGYNVQSFEINAKDYGVPQHRERIIFVAVRN 289
>gi|392397795|ref|YP_006434396.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528873|gb|AFM04603.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 321
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
R++ E V + DI+ A + YK NF LR +I EI D++ P
Sbjct: 14 RIAFEELGGECVFSADIDKYACTTYKDNFGDFPLR--DITKVDENEIPNF--DILCAGFP 69
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
CQPF+ GL+K D R T L + IE I + +LENVKG + +L +
Sbjct: 70 CQPFSIGGLRKGFEDIRGT-LFFDIERILRAKKPKAFILENVKGLVNHEKGKTLEIILNK 128
Query: 123 AGFRFQEFL-----------------LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCF 165
G + + ++ FGVP +R R Y+I ++ +F F
Sbjct: 129 LGSKINGIINSEKHDDCLNYNVFYKVVNSKTFGVPQNRERIYII------GFENDINFKF 182
Query: 166 ETS--SELMTELPK--LKANTCNPLLS 188
++ S+L++++ + NT P+L+
Sbjct: 183 PSANKSKLLSDIIDNTQEKNTITPILN 209
>gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis str.
Sheeba]
gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis str.
Sheeba]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVIANEYDKNITPTYRLNHKNTQLLEKDIKNLQTNEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHEKSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFR 164
>gi|428299407|ref|YP_007137713.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235951|gb|AFZ01741.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 458
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------SPDVILM 59
E+ AID N +Y++NFP T + ++I + EI + ++
Sbjct: 35 GFEIAIAIDNNPKVLELYQNNFPDTTVLCKDIGEITATEIRDIIQHKYQDWDGEIAAVIG 94
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITS- 118
PPCQ F+ G QK D L ++ I PS+ ++ENV E + + +
Sbjct: 95 GPPCQGFSVAGKQKLDDDRSQLVLKFINLVIELNPSM--FVMENVPAIEWKKFAGITGNA 152
Query: 119 -MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
L + ++LL+ + FGVP R R + R
Sbjct: 153 IALIEEHYILSKWLLTASDFGVPQKRQRAIWVGSR 187
>gi|420528218|ref|ZP_15026610.1| modification methylase HaeIII [Helicobacter pylori Hp P-25c]
gi|420530086|ref|ZP_15028471.1| modification methylase HaeIII [Helicobacter pylori Hp P-25d]
gi|393134113|gb|EJC34528.1| modification methylase HaeIII [Helicobacter pylori Hp P-25c]
gi|393136415|gb|EJC36806.1| modification methylase HaeIII [Helicobacter pylori Hp P-25d]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + S Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKSITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L + +GV R R + I R
Sbjct: 139 VNTHLANAKDYGVAQERLRVFYIGFRK 165
>gi|390442178|ref|ZP_10230192.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|425472072|ref|ZP_18850923.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
gi|389834470|emb|CCI34318.1| Cytosine-specific methyltransferase [Microcystis sp. T1-4]
gi|389881963|emb|CCI37552.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9701]
Length = 728
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMS 60
RL+ + + V + +I+ + VY +NF + ++I+ +I ++ PD V+
Sbjct: 19 RLAFESVGYDCVYSCEIDENCRKVYFNNF--QEIPDQDIRKIAIHDL----PDFEVLTAG 72
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQPF+ +G + D R T ++ E + + + +LLENVK + ++ D+I
Sbjct: 73 FPCQPFSISGKRAGFRDTRGTLFFHICEIV-ELKKPKIILLENVKHLIHLDKGKNLDIIL 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ LL+ FGVP +R R +IA ++
Sbjct: 132 HSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQN 167
>gi|414079710|ref|YP_007001134.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413972989|gb|AFW97077.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 458
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 18 DINTSANSVYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
+I+ A VYK+NF R TN + + + + DV++ PCQP++ G K +
Sbjct: 56 EIDKEAIKVYKNNFIRDTNTDEQYLGDITNLDKLPFELDVMVGGVPCQPWSIAGKLKGLK 115
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLLS 133
D R + + I + + + ENVKG R+R + I LT +G+ + +L+
Sbjct: 116 DPRGQLWNDVFRVIKS-NQPKAFIFENVKGLTEPRNRPSLEYILENLTSSGYVVKYQVLN 174
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
FG+P R R +++ R+ +S +F
Sbjct: 175 SYDFGLPQDRDRIFIVGIRNDLDNSWGFTF 204
>gi|416239158|ref|ZP_11631708.1| type II DNA modification enzyme [Moraxella catarrhalis BC1]
gi|326567346|gb|EGE17461.1| type II DNA modification enzyme [Moraxella catarrhalis BC1]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQ F+ G + + D R + YL + + + +LENVKG +
Sbjct: 65 DVMLAGFPCQTFSIVGKRAGLDDNRGQIIYYLTDILKQ-KKVSFFILENVKGLINHNKGK 123
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+ + I S+L+ AG+ +L +GVP R R Y + R H
Sbjct: 124 TLNFILSLLSEAGYDVYHQVLDSQYYGVPQMRQRVYFVGIRKDIKH 169
>gi|237711274|ref|ZP_04541755.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA]
gi|229455118|gb|EEO60839.1| site-specific DNA-methyltransferase [Bacteroides sp. 9_1_42FAA]
Length = 296
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS-IEEINAMSPDVILMSPP 62
L +S E V +I A + +K+NFP +I S + I ++ PD+I P
Sbjct: 17 LQAAGYSFEKVFFSEIEKHAIANFKYNFPYAE----HIGSVTDIAKVGIARPDIITFGSP 72
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR----DLITS 118
CQ F+ G + + + Y +E + + ENVKG +R R +I +
Sbjct: 73 CQNFSAVGDGTGLRGEASSLVRYAVEAVGKFRP-DVFIWENVKGILFARHRADFWSIIKA 131
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
G+R + LL+ F +P SR R YL+ +
Sbjct: 132 FADIGGYRLEWQLLNTAWF-LPQSRERMYLVGR 163
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ V+ +NFP ++ R+IQ+ + +EI +S DV+ PPC
Sbjct: 26 GFDVLASVEIDPIHCLVHHYNFPFWSIICRDIQTITGQEIRQLSKVGNHPIDVVFGGPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G ++ + D R +++ I + + + +LENV G + L+ + +
Sbjct: 86 QGFSLMG-KRVLEDERNALIAHFIRLVLEL-QPKYFVLENVPGMAIGSHQQLLQEIFDKF 143
Query: 124 GFRFQEF-----LLSPTQFGVPNSRTRYYLIA 150
+ E +L+ +GVP +R R +L+
Sbjct: 144 SYHGYEVETNYQILNAANYGVPQNRERLFLLG 175
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
N F+ ++ AIDI+ A YK N + G I+E + DV++ PPC
Sbjct: 19 FKNSGFN--IIWAIDIDKDAVLTYKENLGDHIILG---DITKIQEKDIPEADVVIGGPPC 73
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLIT 117
Q F+ G ++ D R + + I I +C + ENV G EG+ D +
Sbjct: 74 QSFSLVGKRRS-DDERGQLVWQYLRIINEI-RPKCFVFENVVGLKSAKTAEGNLVLDELI 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ Q +L+ +GVP R R +++ R
Sbjct: 132 IAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTRE 167
>gi|427406708|ref|ZP_18896913.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. F0473]
gi|425708138|gb|EKU71179.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. F0473]
Length = 342
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 NHAFSLEVVTAI--DINTSANSVYKHNFPRT-NLRGRNIQSFSIEEINAMSPDVILMSPP 62
+ AF ++ T + + A Y+ NF +RG + I E + + D++L P
Sbjct: 19 DQAFEKDIDTVFVSEWDEKAQITYRENFHDPFPIRGDLTK---IREADIPAHDILLAGFP 75
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQ F+ G ++ D R T L + +E I + + ENVK + R+ +I S+
Sbjct: 76 CQAFSLAGKRRGFEDTRGT-LFFDVERIARFHRPRVIFCENVKNLVNHDRGRTFRVIRSI 134
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ G+R +L+ FGVP R R Y++A R A
Sbjct: 135 FEKLGYRIFYKVLNSKDFGVPQHRERIYIVAFRDDA 170
>gi|408907377|emb|CCM11527.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 314
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPFTRTG 70
V A + N +A + YK NFP+T L G + +EI A P D++ PCQ F+ G
Sbjct: 25 VFASENNPAAQATYKLNFPKTPLFG----DITTQEIQAQIPLNFDILCGGFPCQAFSIAG 80
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR- 126
QK AD R T L + I I + L LENVK + ++ +I L G+
Sbjct: 81 HQKGFADTRGT-LFFEIAKIAHRHHPKVLFLENVKNLKTHDKGQTFSIILKTLQDLGYAP 139
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA---KRSPAAHSSEASFCFETSSELMTEL 175
+ L S T V +R R +++A K+ P + A F F T +L +
Sbjct: 140 YTAILNSATHANVAQNRERLFIVAFDIKQVP----NHAKFSFPTPIKLTKNI 187
>gi|425461547|ref|ZP_18841025.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
gi|389825583|emb|CCI24535.1| Cytosine-specific methyltransferase [Microcystis aeruginosa PCC
9808]
Length = 728
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMS 60
RL+ + + V + +I+ + VY +NF + ++I+ +I ++ PD V+
Sbjct: 19 RLAFESVGYDCVYSCEIDENCRKVYFNNF--QEIPDQDIRKIAIHDL----PDFEVLTAG 72
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQPF+ +G + D R T ++ E + + + +LLENVK + ++ D+I
Sbjct: 73 FPCQPFSISGKRAGFRDTRGTLFFHICEIV-ELKKPKIILLENVKHLIHLDKGKNLDIIL 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ LL+ FGVP +R R +IA ++
Sbjct: 132 RSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQN 167
>gi|443654401|ref|ZP_21131323.1| putative potein [Microcystis aeruginosa DIANCHI905]
gi|159027646|emb|CAO89510.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333793|gb|ELS48333.1| putative potein [Microcystis aeruginosa DIANCHI905]
Length = 728
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMS 60
RL+ + + V + +I+ + VY +NF + ++I+ +I ++ PD V+
Sbjct: 19 RLAFESVGYDCVYSCEIDENCRKVYFNNF--QEIPDQDIRKIAIHDL----PDFEVLTAG 72
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQPF+ +G + D R T ++ E + + + +LLENVK + ++ D+I
Sbjct: 73 FPCQPFSISGKRAGFRDTRGTLFFHICEIV-ELKKPKIILLENVKHLIHLDKGKNLDIIL 131
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ LL+ FGVP +R R +IA ++
Sbjct: 132 RSLEELGYLVDYKLLNAKDFGVPQNRERIIIIATQN 167
>gi|313892290|ref|ZP_07825883.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
gi|313119428|gb|EFR42627.1| modification methylase HpaII [Dialister microaerophilus UPII 345-E]
Length = 329
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 7 HAFSLEVVTAI--DINTSANSVYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
AF E+ T + + A Y+ NF +RG +I + I+E + +++L PC
Sbjct: 20 QAFKNEIKTVFVSEWDKKAQETYRANFKDDIEIRG-DINT--IDEKDIPKHNILLAGFPC 76
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
Q F+ G +K DAR T L + + I + + ENVK + R+ +I ++L
Sbjct: 77 QAFSLAGQKKGFEDARGT-LFFSVAKIAEYHKPEVIFCENVKNLLNHDKGRTFKVIKNIL 135
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ +L+ FGVP +R R Y++A R+
Sbjct: 136 VDLGYTVFYKILNSKNFGVPQNRERIYIVAFRN 168
>gi|350272701|ref|YP_004884009.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348597543|dbj|BAL01504.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 384
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ A DI+++A YK NF +RG +I + S+ +I DV++ PPCQ F+
Sbjct: 28 GFNIIWASDISSNATETYKLNFGHEAIRG-DILNVSLNDIPKA--DVVIGGPPCQSFSLV 84
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGS-----RSRDLITSMLTRAG 124
G +++ D R + ++ + + + ++ENV G S R D++ T+ G
Sbjct: 85 G-KRNPDDIRGQLVFRYLDVVKHLMP-KVFVMENVPGLAASKINKKRLTDILIDEYTQLG 142
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
++ L T + VP R R L+ + +AS
Sbjct: 143 YKVTRMDLVATDYLVPQKRKRIVLVGCKDWIPEKPDASL 181
>gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 456
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM--SPDVILMSPPCQPFTRTGLQKDI 75
+I+T A VY+ NF R + R I ++N + DVI+ PCQP++ G +
Sbjct: 56 EIDTEAIKVYRRNFIRYSNRDETYLG-DITQLNQIPFKVDVIVGGVPCQPWSIAGKLRGF 114
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I I + + ENVKG R++ D I + L ++G+ Q +L
Sbjct: 115 EDPRGQLWFDVIRLIKD-NKPKGFIFENVKGLTDPRNQESFDYILNQLKQSGYYVQHKVL 173
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ FG+ R R +++ ++++ SF
Sbjct: 174 NSYDFGLSQDRDRVFIVGIHQQIENAAQFSF 204
>gi|440753325|ref|ZP_20932528.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440177818|gb|ELP57091.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 24 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESSQEILAQYNPEIIVGSPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ + G+ E
Sbjct: 81 G-KRDEGLGRANLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILIQAKQIFKSHGYGLTE 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 139 KVINSCYCGVPQTRKRYFLIGK 160
>gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 456
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM--SPDVILMSPPCQPFTRTGLQKDI 75
+I+T A VY+ NF R + R I ++N + DVI+ PCQP++ G +
Sbjct: 56 EIDTEAIKVYRRNFIRYSNRDETYLG-DITQLNQIPFKVDVIVGGVPCQPWSIAGKLRGF 114
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I I + + ENVKG R++ D I + L ++G+ Q +L
Sbjct: 115 EDPRGQLWFDVIRLIKD-NKPKGFIFENVKGLTDPRNQESFDYILNQLKQSGYYVQHKVL 173
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ FG+ R R +++ ++++ SF
Sbjct: 174 NSYDFGLSQDRDRVFIVGIHQQIENAAQFSF 204
>gi|210632067|ref|ZP_03297189.1| hypothetical protein COLSTE_01082 [Collinsella stercoris DSM 13279]
gi|210159724|gb|EEA90695.1| DNA (cytosine-5-)-methyltransferase [Collinsella stercoris DSM
13279]
Length = 392
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLR-GRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+VV A + SA + Y NF + + N +++EI M P I+ PPCQ F+
Sbjct: 23 GFDVVAAYENWDSAIACYNLNFNHSAKQLDLNDVDAAVQEIAPMKPTAIIGGPPCQDFSH 82
Query: 69 TGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G + + A T + + +I+ I +C ++ENV + S + + + AG+
Sbjct: 83 AGKRIEAGRAGLTESYANIIQQIRP----RCFVMENVARAQSSHAYAVAREIFKTAGYGL 138
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
E +L+ + GVP SR R++ I
Sbjct: 139 TEQVLTASFCGVPQSRKRFFCIG 161
>gi|225019628|ref|ZP_03708820.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
gi|224947595|gb|EEG28804.1| hypothetical protein CLOSTMETH_03581 [Clostridium methylpentosum
DSM 5476]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+V A + A Y+ NF P + +++ S+E+I + P++I+ PPCQ F+
Sbjct: 22 GFNIVGAFEFWDIAADCYEKNFEHPVYRMDLSDVEK-SVEKIKLLKPEIIIGGPPCQDFS 80
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G K I R + + I I + ++ENV + S + ++ +AG+
Sbjct: 81 HAG--KRIEAGRASLTGAYAQIISEIRP-RYFVMENVDRAQKSNTYASARNIFVKAGYGL 137
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
E +L + GVP R R++ I
Sbjct: 138 TEIILDASHCGVPQKRKRFFCIG 160
>gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase [Bacillus cereus AH820]
gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820]
Length = 350
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 17/151 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPFTR 68
E+V A +++ +A+ Y+H + +G +Q + E++ + D+++ PCQ F+
Sbjct: 27 EIVWANEVDRNASITYRHFW-----KGEYLQEADVTEVDKTTIPQLDILIGGFPCQAFSI 81
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL-----QCLLLENVKGFEGSRSRD---LITSML 120
G +K D R +++ I A + + ++LENVK +G + +I L
Sbjct: 82 AGYRKGFEDERGNMFFQILDVIDAQEKMYGTKPKAIMLENVKNLKGHDKGNTFRVIKECL 141
Query: 121 TRAGFRFQEFLLSPTQFG-VPNSRTRYYLIA 150
G+ ++ +L+ ++G VP +R R Y++
Sbjct: 142 EEKGYTIKDKVLNSMEYGNVPQNRERIYIVG 172
>gi|289167787|ref|YP_003446056.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|417847802|ref|ZP_12493763.1| putative modification methylase BanI [Streptococcus mitis SK1073]
gi|418166562|ref|ZP_12803218.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211041|ref|ZP_15668025.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2070035]
gi|288907354|emb|CBJ22191.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|339456200|gb|EGP68793.1| putative modification methylase BanI [Streptococcus mitis SK1073]
gi|353830158|gb|EHE10288.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573764|gb|EJG34351.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2070035]
Length = 346
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E+V A DI SAN +++ NF T RNI+ +EI + D++ PCQ F+ +
Sbjct: 35 QIEIVYANDIEDSANKMFEKNFGVTP-DNRNIREIKSDEIPSF--DILTGGFPCQSFSVS 91
Query: 70 GLQKD---IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRA 123
I D + T ++ + A + ENVKG + +++ LI +A
Sbjct: 92 AQNPKRLGIKDEKGTLFFEMVRVLKA-HQPKAFFAENVKGILSANNKEAFPLIIEEFEKA 150
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
G+ L T++GVP R R +++ R + +F FE E
Sbjct: 151 GYNVSYKLCVATKYGVPQKRERVFIVGIR------KDLNFTFEFPEE 191
>gi|421231709|ref|ZP_15688354.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2080076]
gi|395596199|gb|EJG56421.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae 2080076]
Length = 346
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E+V A DI SAN +++ NF T RNI+ +EI + D++ PCQ F+ +
Sbjct: 35 QIEIVYANDIEDSANKMFEKNFGVTP-DNRNIREIKSDEIPSF--DILTGGFPCQSFSVS 91
Query: 70 GLQKD---IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRA 123
I D + T ++ + A + ENVKG + +++ LI +A
Sbjct: 92 AQNPKRLGIKDEKGTLFFEMVRVLKA-HQPKAFFAENVKGILSANNKEAFPLIIEEFEKA 150
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
G+ L T++GVP R R +++ R + +F FE E
Sbjct: 151 GYNVSYKLCVATKYGVPQKRERVFIVGIR------KDLNFTFEFPEE 191
>gi|428318000|ref|YP_007115882.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241680|gb|AFZ07466.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 359
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAMSPDVILMSPPCQPFTR 68
V A + + S Y N P T L R+I+ +EI N + I+ PPCQ ++
Sbjct: 34 GFNAVWANEYDKSIWDTYNFNHPETILDRRDIRKIKSDEIPNCIG---IIGGPPCQSWSE 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGF 125
G ++ I D+R I + L L ENV G R+++ T +L++ G+
Sbjct: 91 AGAKRGIDDSRGQLFWEYIRIVRDKQPL-FFLAENVSGILAPRNKEAFTYILSQFEEIGY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNP 185
R LL+ F VP R R ++ R F FE L A
Sbjct: 150 RVLYKLLNAKNFDVPQDRQRVIVVGYR------QNLGFGFEYPQPGTNVLTLKDAIFDLQ 203
Query: 186 LLSRMTLHGILDSTH 200
++ M++ G LD+ H
Sbjct: 204 AIAPMSVKGKLDNYH 218
>gi|428205526|ref|YP_007089879.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428007447|gb|AFY86010.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 356
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVI--LMSP 61
L H ++ A + + S + Y+ N T L R+I+S +EI PD I + P
Sbjct: 15 LGFHQAGFNIIWANEYDRSIWNTYEINHQNTKLDKRDIRSIQSDEI----PDCIGIIGGP 70
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT 121
PCQ ++ G + I D+R I + L L ENV G + T++L
Sbjct: 71 PCQSWSEAGAGRGINDSRGQVFYEYIRILKDKKPL-FFLAENVSGILADKHAQAFTNILY 129
Query: 122 R---AGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ AG+ LL+ F VP R R +I R
Sbjct: 130 QFKDAGYELAYKLLNAQNFEVPQDRKRVIIIGYR 163
>gi|148988377|ref|ZP_01819824.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|147926058|gb|EDK77132.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pneumoniae
SP6-BS73]
Length = 343
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E+V A DI SAN +++ NF T RNI+ +EI + D++ PCQ F+ +
Sbjct: 35 QIEIVYANDIEDSANKMFEKNFGVTP-DNRNIREIKSDEIPSF--DILTGGFPCQSFSVS 91
Query: 70 GLQKD---IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRA 123
I D + T ++ + A + ENVKG + +++ LI +A
Sbjct: 92 AQNPKRLGIKDEKGTLFFEMVRVLKA-HQPKAFFAENVKGILSANNKEAFPLIIEEFEKA 150
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
G+ L T++GVP R R +++ R + +F FE E
Sbjct: 151 GYNVSYKLCVATKYGVPQKRERVFIVGIR------KDLNFTFEFPEE 191
>gi|113477918|ref|YP_723979.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110168966|gb|ABG53506.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 337
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 35 NLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIP 94
NL+G Q E VI+ PPCQPF+ G QK + D+R I + +
Sbjct: 58 NLKGNCTQIALTSETKLPPGKVIIGGPPCQPFSVGGKQKGLQDSR-DGFPIFINAVAKLK 116
Query: 95 SLQCLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ L ENV+G + D IT L G+ + LL+ FGVP +R R +I
Sbjct: 117 P-EIWLFENVRGLLYRNKWYLDEITQALQSLGYIIEVKLLNTVDFGVPQNRQRVIVI--- 172
Query: 153 SPAAHSSEASF 163
H E +F
Sbjct: 173 ---GHKGEFTF 180
>gi|330835884|ref|YP_004410612.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
gi|329568023|gb|AEB96128.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
Length = 321
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPF 66
E+ AID+N +A Y NFP + +I++ + ++I + PDV++ SPPC+PF
Sbjct: 24 GFEISLAIDLNHAAARTYSSNFPTATVLEEDIRNVTGKDIIGLIGSRPDVVIGSPPCEPF 83
Query: 67 TRTG-------LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG-FEGSRSRDLITS 118
T +++ D R T I + + + ++ENV E ++ I +
Sbjct: 84 TGANPLRMNNPVERLYVDERGTLTLEFIRLVGEL-RPRIFIMENVPSIIETKELKEAIIN 142
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYY-----LIAKRSPAAHSSEASFCFE 166
R G+ LL +G P+ RTR + L K SP EA + E
Sbjct: 143 EFRRVGYEPIFNLLRAENYGNPSKRTRIFISNVKLELKTSPKKTVWEAIYDLE 195
>gi|312873586|ref|ZP_07733633.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d]
gi|311090839|gb|EFQ49236.1| modification methylase BanI [Lactobacillus iners LEAF 2052A-d]
Length = 487
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVIL 58
E L+++ + + V + DI SA + YK NF P+ ++ I N + D +L
Sbjct: 88 EALTDYGLTGKCVFSSDIKESAITAYKTNFGENPKCDIT-------KINPTNLPNFDFLL 140
Query: 59 MSPPCQPFTRTGLQKDIADARCTAL----SYLIETIPAIPSLQCLLLENVKGF---EGSR 111
PCQ F++ GL D R T L+E P +LENV+G + R
Sbjct: 141 AGFPCQAFSQAGLGLGFQDTRGTLFFDVAKILLEKKPI-----GFVLENVEGLVNHDNGR 195
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ I + L G+ +L+ F + SR R Y+I RS E FE + +
Sbjct: 196 TFKTIKNTLLELGYDIDAKVLNSKDFNLAQSRNRIYIIGLRSGKVKKLEG---FEKKTSV 252
Query: 172 MTEL 175
+ ++
Sbjct: 253 LKDI 256
>gi|67920370|ref|ZP_00513890.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67857854|gb|EAM53093.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 339
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 29 HNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIE 88
H++ + NLRG+ Q VI+ PPCQPF+ G QK + D+R I
Sbjct: 55 HSYEK-NLRGKCEQIELTVNSKLSGASVIIGGPPCQPFSVGGKQKGLRDSR-DGFPIFIN 112
Query: 89 TIPAIPSLQCLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRY 146
I + L ENV+G ++ D IT L G+ + LL+ FGVP +R R
Sbjct: 113 AIKQVKP-DIWLFENVRGLLYKNKWYFDKITQSLQDLGYIIEWKLLNSVDFGVPQNRERL 171
Query: 147 YLIAKRS 153
++ R
Sbjct: 172 MVVGHRG 178
>gi|376259604|ref|YP_005146324.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
gi|373943598|gb|AEY64519.1| DNA-methyltransferase Dcm [Clostridium sp. BNL1100]
Length = 385
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ ++ A DI + A YKHNF + ++ +I++ I I D+++ PCQ F+
Sbjct: 87 NFNIIWANDIESHACETYKHNF-KHDIVCNDIKNVDINTI--PKADIVIGGFPCQDFSIA 143
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGS-RSRDLITSMLTRAGF 125
GL+K ++ R + I L + ENV+G GS + +LI + G+
Sbjct: 144 GLRKGLSSERGQLYLEMKRVIEHCQPL-AFIAENVEGLTNINGSNETIELIKEDFAKCGY 202
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L T +GVP +R R ++I R
Sbjct: 203 NVTYNLFHATDYGVPQTRKRVFIIGIRE 230
>gi|428778955|ref|YP_007170741.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693234|gb|AFZ49384.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 333
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTN---LRGRNI----QSFSIEEINAM-SPDVIL 58
H L+ V A +++ A Y+HNF + + G Q + ++ N + DV+
Sbjct: 28 HDLGLQCVFASELDRKARETYEHNFKQISPQLFTGETQPLFNQDITQQDFNLIPDHDVLC 87
Query: 59 MSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDL 115
PCQPF+ G +K + D L + I I + LENVK + ++ +
Sbjct: 88 GGFPCQPFSIAGYRKGLKDQGRGDLFFTILEIIRRKKPAVIFLENVKNLLSHDQGKTYNY 147
Query: 116 ITSMLTRAGFRFQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
+ ++++ G+ E +L+ +G +P +R R Y++ +S A+S F F L TE
Sbjct: 148 MKTLISEEGYYVTEKVLNTMTYGNLPQNRERLYILGFKSKIAYS---HFAFPQPVPLTTE 204
Query: 175 LPKLKAN 181
+ N
Sbjct: 205 FRSMLEN 211
>gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205]
gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205]
Length = 353
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHN---FPRTNLRGRNIQSFSIEEI------NAMSPDVILMS 60
+++ + DI A + K N F R+I E+ + D++
Sbjct: 25 GFDILYSFDIEAKAIATIKANPEYFKNHKAETRDIYDVETAELLKSLNLKSGELDLLAGG 84
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML 120
PPCQ F+ + D+ + Y+ + I P + +LENV G EG R ++++ S L
Sbjct: 85 PPCQGFSVQRIGADLDERNHLVEEYISKVIAIRPKM--FILENVPGIEGKRGKNILHSAL 142
Query: 121 ---TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++G+ E +L +GVP R R ++ +R
Sbjct: 143 EKVEKSGYFIHEKILDAQDYGVPQRRKRVVIVGERK 178
>gi|421715162|ref|ZP_16154480.1| modification methylase HaeIII [Helicobacter pylori R036d]
gi|407216016|gb|EKE85854.1| modification methylase HaeIII [Helicobacter pylori R036d]
Length = 327
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLKELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFR 164
>gi|365875704|ref|ZP_09415230.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442587430|ref|ZP_21006247.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
gi|365756549|gb|EHM98462.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis Ag1]
gi|442562871|gb|ELR80089.1| DNA-cytosine methyltransferase [Elizabethkingia anophelis R26]
Length = 436
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITS 118
PCQPF+ GL++ + R T ++E + + + LLENVKG +G ++ +I +
Sbjct: 173 PCQPFSYAGLKQGFDETRGTLFFDILEILKNT-TPKMFLLENVKGLKSHDGGKTLKVIEN 231
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
LT G+ + +L+ FG+P R R+Y + R
Sbjct: 232 SLTELGYTIKWEILNSYDFGLPQYRERWYCVGFR 265
>gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 415
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ A++IN + Y++NFP + R++ EEI +S DV+ PPC
Sbjct: 30 GFDVLAAVEINPIHCATYEYNFPFWTIICRSVADIRGEEIRQLSALKNQEIDVVFGGPPC 89
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSML 120
Q F+ G ++ I D R + + + + + + + ++ENV G + + D I
Sbjct: 90 QGFSLMG-KRLIDDPRNELIFHFLRLVLEL-NPKYFVMENVPGLALGQHKQFLDRIILEF 147
Query: 121 TRAGFRFQE--FLLSPTQFGVPNSRTRYYLIAKRS---PAAHSSEASFCFETSSELMTEL 175
+ G++ +L+ +GVP +R R +L+ + P + S T E + +L
Sbjct: 148 NQKGYKIDNNYQILNAANYGVPQNRKRLFLLGGKKNLPPLKYPEAISDKKTTVWEAIQDL 207
Query: 176 PKL 178
P++
Sbjct: 208 PEV 210
>gi|385227087|ref|YP_005787011.1| site-specific DNA methyltransferase [Helicobacter pylori SNT49]
gi|344332000|gb|AEN17030.1| site-specific DNA methyltransferase [Helicobacter pylori SNT49]
Length = 327
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFEECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VHTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|256375192|ref|YP_003098852.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
gi|255919495|gb|ACU35006.1| DNA-cytosine methyltransferase [Actinosynnema mirum DSM 43827]
Length = 361
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E V A++ + A S Y NF ++R +I + + + DV++ PPCQ F+
Sbjct: 19 GFEPVMAVEHDLHAASTYAANFGEDHVRWADIAAVPDSAVPRV--DVVVGGPPCQGFSTL 76
Query: 70 GLQKDIADARCTAL-SYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
G +D+ D R + YL A PS+ ++ENV F S L+ + G+
Sbjct: 77 G-SRDVDDPRNSLWREYLRVVRAARPSV--FVIENVGRFLASTEFALLQAETE--GYELS 131
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRS-----PA-AHSSEASFCFETSSELMTELPKLKANT 182
+L FGVP R R +I R PA H+ E+ + +++T LP++ A+T
Sbjct: 132 AGVLLAADFGVPQRRRRAIVIGSRVGKVELPAPTHARES---WHAVRDVLTGLPEVPAST 188
Query: 183 CNPLLS 188
P S
Sbjct: 189 ALPRAS 194
>gi|443476547|ref|ZP_21066447.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443018456|gb|ELS32699.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 425
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ + +++NFP + N+ S +EI S DV+ PPC
Sbjct: 26 GFDVLASVEIDPIHCATHEYNFPMWKVICANVTKISGDEIRQKSQIGDREVDVVFGGPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSML 120
Q F+ G ++ D R +S+ + + + + + ++ENVKG R D +
Sbjct: 86 QGFSLMG-KRAFDDPRNELVSHFMRIVTEL-NAKYFVMENVKGLTVGNHRKFLDEVIDSF 143
Query: 121 TRAGFR-FQEF-LLSPTQFGVPNSRTRYYLIAKRS 153
+ G++ Q + +L+ FGVP R R +LI R
Sbjct: 144 EQNGYKVLQNYKVLNAAHFGVPQHRERLFLIGCRQ 178
>gi|256819720|ref|YP_003140999.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
gi|256581303|gb|ACU92438.1| DNA-cytosine methyltransferase [Capnocytophaga ochracea DSM 7271]
Length = 389
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 27/222 (12%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + F+ + ID + AN YK+NFP G +I + + + D+I PCQ
Sbjct: 20 AGYHFTEHYFSEIDKHAIAN--YKNNFPNAKYIG-DITTLHGGDFTGI--DIITFGSPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKG-FEGSRSRDL--ITSML 120
F+ G + +A A+ + + Y I I + PS+ + ENVKG F + D I
Sbjct: 75 DFSLAGKRAGLAGAKSSLIQYAIALIANVRPSI--FIWENVKGAFSSNAGADFWAILQAF 132
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLI---AKRSPAA----HSSEASFCFETSSELMT 173
T G E+ L T++ +P +R R YLI A RS + F ET E
Sbjct: 133 THIGGYRLEWQLLNTRWVLPQNRERIYLIGHLAGRSECGVFPITEDDRLFKRETRKE-NG 191
Query: 174 ELPKLKANTCNPLLSRMTLHGILDS--------THPSGDLYR 207
E P +K + + SR G D+ TH G +R
Sbjct: 192 EFPSIKTSPARTITSRYHKMGSNDTYIQVGTYRTHNDGKGFR 233
>gi|414077047|ref|YP_006996365.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413970463|gb|AFW94552.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 328
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 6 NHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
N+ + V + DI+ +A +Y NF T + I+E + D++L PCQP
Sbjct: 24 NYKIPCQCVFSSDIDINAQKIYLENFGETPIGDIT----KIDENDIPDHDILLGGFPCQP 79
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTR 122
F+ G K D R T L + I I +LENVK +G ++ +I + L
Sbjct: 80 FSICGELKGFEDTRGT-LFFDIARIIKNKQPSAFILENVKQLKGHQQGQTLQIIINTLKD 138
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
G+ +L+ FG+P R R ++ ++ H
Sbjct: 139 LGYYTDYQILNAVNFGLPQKRERILIVGLKNQTHH 173
>gi|424033621|ref|ZP_17773034.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|424037455|ref|ZP_17776242.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
gi|408874280|gb|EKM13454.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|408895524|gb|EKM31886.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
Length = 337
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
V A + + + Y+ N P T L R+I + +E+ D I+ PPCQ ++
Sbjct: 23 GFNVTWANEYDKDIWATYEKNHPHTTLDRRSITNIDADEVPEC--DGIIGGPPCQSWSEA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDL---ITSMLTRAGFR 126
G Q+ I D R I + A + L ENV G + +R + I M AG+
Sbjct: 81 GAQRGIEDKRGQLFFDFIRILEA-KKPKFFLAENVSGMQHTRHANALNNIKQMFKDAGYD 139
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+++ +G R R I RS
Sbjct: 140 LYYQMMNAVDYGAAQDRKRVIFIGFRS 166
>gi|344942873|ref|ZP_08782160.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|344260160|gb|EGW20432.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTN---LRGRNIQSFSIEEI------NAMSP 54
L+ +V AI+IN A + Y+ N N L +NI + EEI +
Sbjct: 20 LAAKNVGFKVSAAIEINNHACTTYRQNLIEGNSTKLYQKNILELAPEEIKHAHFMDGAVC 79
Query: 55 DVILMSPPCQPFTRTGLQK-DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
D++L PPCQ F+ ++ I D R + E + A+ + L+ENV G SR +
Sbjct: 80 DIVLGGPPCQGFSVHRIKDAGIDDPRNKLILRYFEYV-AVLKPKVFLMENVPGILWSRHK 138
Query: 114 DLITSMLT---RAGFRF-QEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + +AG++ Q L +G+P R R +++ RS
Sbjct: 139 KFLDAFYAEGKKAGYQLMQPVTLDARDYGLPQRRKRVFILGIRS 182
>gi|255279955|ref|ZP_05344510.1| modification methylase EcoRII [Bryantella formatexigens DSM 14469]
gi|255269728|gb|EET62933.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 311
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+V+ A D + A YK NF + G +I ++EI DV++ PCQPF+ G
Sbjct: 23 DVIWANDFDKYAVQTYKANFGEHIVLG-DINEIPLDEIP--DCDVLIGGFPCQPFSMMGQ 79
Query: 72 QKDIADARCTALSYLIETI---------PAIPSLQCLLLENVKGF----EGSRSRDLITS 118
QK D R T + E I PA ++LENV+ +G+ R++
Sbjct: 80 QKGFEDTRGTLFFRIAEIIADKIKKGRKPA-----AIVLENVRTLKTHDKGNTFREIRRI 134
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+ G+ +L+ FGVP +R R YL+ + +A F F + L + L L
Sbjct: 135 LQDELGYEVFCDILNSADFGVPQTRNRTYLV-----CFSNQKAEFTFPQTEPLESTLQDL 189
>gi|434405034|ref|YP_007147919.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428259289|gb|AFZ25239.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 466
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 21/159 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ + ++ NFP + ++I + EEI + S DV+ PPC
Sbjct: 58 GFDVLASVEIDPIHCATHQFNFPFWKIFCKSIVEITSEEIRSFSDIGEQEIDVVFGGPPC 117
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G ++++ D R + + I + + + ++LENVKG + ++ I ++
Sbjct: 118 QGFSLIG-KRNLDDPRNGLVDHYIRLVLEL-QPKFVVLENVKGMTVGKHQEFILEII--- 172
Query: 124 GFRFQE---------FLLSPTQFGVPNSRTRYYLIAKRS 153
++F+E +L+ ++GVP +R R +L+A R
Sbjct: 173 -YKFEENGYQVLKNYKILNAAEYGVPQNRERLFLLACRQ 210
>gi|422303947|ref|ZP_16391296.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9806]
gi|389791017|emb|CCI13157.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9806]
Length = 405
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 119 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESSQEIFAQYNPEIIVGSPPCQDFSSA 175
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ + G+
Sbjct: 176 G-KRDEGLGRANLKLTFAEIVTGV-SPQWFVMENVDRIEKSKILTQAKQIFKSHGYGLTG 233
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 234 KVINSCYCGVPQTRKRYFLIGK 255
>gi|420475827|ref|ZP_14974496.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393091693|gb|EJB92320.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 327
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILMSPPCQPFTR 68
E+V A D + + YK N + G I++INA +V++ PCQ F++
Sbjct: 23 EIVWANDFDKDCVATYKKNIGNHAVLG------DIKKINASQIPRGEVVVGGFPCQGFSQ 76
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKG---FEGSRSRDLITSMLTRA 123
L + D R S IE + + SLQ L ENV+G EG + I A
Sbjct: 77 ANLLRSGNDERN---SLYIEFLRIVSSLQPRYFLAENVRGILSLEGGSAIKKILGDFNNA 133
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRS----------PAA-HS---SEASFCFETSS 169
G+R + L + FGVP SR R + R PAA H+ S+ + T
Sbjct: 134 GYRLKYKLFNVADFGVPQSRFRVIIAGTRKDIPKRLDYEYPAATHAQAPSQGKLPWVTIG 193
Query: 170 ELMTELPK 177
E + E+P+
Sbjct: 194 EALKEIPE 201
>gi|423467247|ref|ZP_17444015.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
gi|423625948|ref|ZP_17601726.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|401253295|gb|EJR59537.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|402414481|gb|EJV46813.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
Length = 350
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPFTR 68
E+V A +++ +A+ Y+H + +G +Q + E++ + D+++ PCQ F+
Sbjct: 27 EIVWANEVDRNASITYRHFW-----KGEYLQEADVTEVDKTTVPQLDILIGGFPCQAFSI 81
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL-----QCLLLENVKGFEG---SRSRDLITSML 120
G +K D R +++ I A + + ++LENVK +G + +I L
Sbjct: 82 AGYRKGFEDERGNMFFQILDVIDAQEKMYGTKPKAIMLENVKNLKGHDKGNTFKVIKECL 141
Query: 121 TRAGFRFQEFLLSPTQFG-VPNSRTRYYLIA 150
G+ + +L+ ++G VP +R R Y++
Sbjct: 142 EEKGYTIKAKVLNSMEYGNVPQNRERIYIVG 172
>gi|420398587|ref|ZP_14897800.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015261|gb|EJB16432.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 327
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------S 53
L + EV AID N +Y++NFP T + ++I + EI +
Sbjct: 21 LGFQSAGFEVAIAIDNNPKVLELYQNNFPDTTVLCKDIGEITATEIRDIIQHKYQDWDGE 80
Query: 54 PDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
++ PPCQ F+ G QK D L ++ I PS+ ++ENV E +
Sbjct: 81 IAAVIGGPPCQGFSVAGKQKLDDDRNQLVLKFINLVIELNPSM--FVMENVPAIEWKKFA 138
Query: 114 DLITS--MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ + L + ++LL+ + +GVP R R I +
Sbjct: 139 GITGNAIALIEEQYILSKWLLTASDYGVPQKRQRAIWIGSK 179
>gi|209527672|ref|ZP_03276170.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|423066291|ref|ZP_17055081.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|209491900|gb|EDZ92257.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|406712333|gb|EKD07522.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 429
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP-PCQPFTRTGLQKDIA 76
+I+ A VY+ NF T I+ I ++ P +L++ PCQ F+ G +
Sbjct: 38 EIDGDARQVYQANFSET-------PQGDIQTIPSLPPHHVLLAGFPCQSFSYAGKKAGFG 90
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLS 133
D R T ++ + + Q + ENV+G + ++ + I + G+ F FLL+
Sbjct: 91 DTRGTLFFEILRLMDS-QQPQAFIFENVRGLVTHDQGKTINTIRQKMQERGYSFDLFLLN 149
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAH 157
+ +GVP +R R Y++ + H
Sbjct: 150 SSNYGVPQNRVRAYMMGVLNQTPH 173
>gi|443322505|ref|ZP_21051526.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
gi|442787773|gb|ELR97485.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
Length = 404
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ A++++ + Y++NFP + ++ +I +SP DV+ PPC
Sbjct: 29 GFDVLAAVEVDPIHCATYQYNFPVGKVICQDASQIKATDIRRLSPLNNQPVDVVFGGPPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM---L 120
Q + G ++D+ D R + L + I + + + +LENV G + L+ M L
Sbjct: 89 QGLSLMG-KRDLDDPRNSLLQHFIRLVIELET-NFFVLENVPGLIIGKCSQLLQEMIEQL 146
Query: 121 TRAGFRFQEFL--LSPTQFGVPNSRTRYYLIA 150
+ G++ +E ++ +GVP R R +L+
Sbjct: 147 AQNGYKVRENFQTINACNYGVPQKRERLFLMG 178
>gi|420429162|ref|ZP_14928195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-17]
gi|393044492|gb|EJB45484.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-17]
Length = 318
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G ++ I + + DV++ P
Sbjct: 17 RLGLERYHLKCVGHAEINDEALRTYELFFKDTHNFGDLMR---INPNDLPNFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 133 LQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537]
Length = 414
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 14 VTAIDINTSANSVYKHNFPR--TNLRGRNIQSFSIEEINAMSPD--VILMSPPCQPFTRT 69
V A + + +A ++ NF T L R+I+ +E+ A +P+ V+L PCQPF+
Sbjct: 28 VYANEFDKNAQHTFETNFKSRGTYLDRRDIKQVDAKEVKAKAPNASVLLAGFPCQPFSIA 87
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF---EGSRSRDLITSMLTRAG 124
G + D R ET I LQ + LENVK + + +I L +G
Sbjct: 88 GYRHGFEDNRG---DLFFETHRIIRFLQPKVIFLENVKNLVTHDHGNTFKVIREFLVHSG 144
Query: 125 FRFQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
+ + +L+ ++G +P +R R Y++ + A +F F +L T+L +
Sbjct: 145 YYIKWKVLNAKEYGNIPQNRERIYVVGFKDKKAFD---NFSFPEKIDLTTKLSDI 196
>gi|384210135|ref|YP_005595855.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
gi|343387785|gb|AEM23275.1| DNA-cytosine methyltransferase [Brachyspira intermedia PWS/A]
Length = 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 8 AFSLEV-VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
AF+ E V A +I+ A+ YK NFP T L G + I+E + D++ PCQPF
Sbjct: 17 AFNSEYCVFASEIDKYASETYKLNFPDTRLEGDITK---IDEKDVPEHDILCAGFPCQPF 73
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE----GSRSRDLITSMLTR 122
+ G +K D R T L + I I + +LLENVK E G+ + +I +
Sbjct: 74 SVAGYRKGFEDVRGT-LFFDIARIIKYHRPKAVLLENVKNLENHDNGNTLKTIINVLQDL 132
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + L S +P +R R +++A
Sbjct: 133 NYYVCYKILNSAEYSNIPQNRERIFIVA 160
>gi|420401981|ref|ZP_14901172.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017800|gb|EJB18952.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|420422200|ref|ZP_14921278.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393038718|gb|EJB39752.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFR 164
>gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
Length = 359
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMS-PDVILM 59
RL + E + +I+ A + YK H+ + + +I + S E I + D+I
Sbjct: 14 RLGMESAGHECIGFCEIDKFARASYKAIHD-TKGEIELHDITAVSDESIRRIGRVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + LLLENVKG +G + + I
Sbjct: 73 GFPCQAFSIAGARRGFEDTRGT-LFFEIARFASILRPKYLLLENVKGLLNHDGGATFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L G+ + +L+ FGVP +R R +++
Sbjct: 132 LGALDELGYNVEWQILNSKDFGVPQNRERVFIVG 165
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPFTRT 69
V+ A + + S + Y N T + +I S ++ + DVI+ PPCQ F++
Sbjct: 26 VLLANEYDESIANAYMKNHKTTKMVVGDITSLDLDAVFGTYKNKIDVIIGGPPCQGFSQK 85
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G +K I D R Y ++ + + + ++ENV E + I ++ G+
Sbjct: 86 GQRKTIYDKRNFLFEYYVKVVELVKP-KYFVMENVPNLLTAEKGYFFNEIETLFNAMGYF 144
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
Q +L+ FGVP +R R +I K + A S +S
Sbjct: 145 LQHGVLNAADFGVPQNRKRAVIIGKMNGVAPSLPSSL 181
>gi|146298415|ref|YP_001193006.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
gi|146152833|gb|ABQ03687.1| DNA-cytosine methyltransferase [Flavobacterium johnsoniae UW101]
Length = 329
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
F LE D N A YK+NF + G ++ + + + ++ ++ PCQPF+
Sbjct: 23 GFELEWANEFDKN--ACITYKNNFEHNLIEG-DVMALDVTSLKKIN--ILTAGFPCQPFS 77
Query: 68 RTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEG---SRSRDLITSMLTRA 123
G +K D+R +++ + + P++ + LENVK +G + +I + + +
Sbjct: 78 VAGYRKGFEDSRGNHFFKILDFVDEMRPNV--IFLENVKNLKGHDKGNTIKVIENEIRKR 135
Query: 124 GFRFQEFLLSPTQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
G+ F +L+ FG +P++R R +++A + F F +L + L
Sbjct: 136 GYTFDSAVLNTKDFGNIPHNRERIFIVAFDKDYIKDDKFEFHFPEKEDLTKSIKDL 191
>gi|384895869|ref|YP_005769858.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|384898848|ref|YP_005774227.1| Type II modification enzyme [Helicobacter pylori F30]
gi|385230134|ref|YP_005790050.1| site-specific DNA methyltransferase [Helicobacter pylori Puno135]
gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30]
gi|344336572|gb|AEN18533.1| site-specific DNA methyltransferase [Helicobacter pylori Puno135]
Length = 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|385216083|ref|YP_005776040.1| Type II modification enzyme [Helicobacter pylori F32]
gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32]
Length = 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|384894101|ref|YP_005768150.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464]
gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464]
Length = 327
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|262402827|ref|ZP_06079388.1| type II restriction-modification system methylation subunit [Vibrio
sp. RC586]
gi|262351609|gb|EEZ00742.1| type II restriction-modification system methylation subunit [Vibrio
sp. RC586]
Length = 341
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L H +V + DI + S Y++N ++ ++I I+ DVIL PC
Sbjct: 24 LGFHKAGFNIVFSNDIEKNVESTYRYNL--GDILIKDITKIDIDSEIPNDIDVILAGIPC 81
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR------DLIT 117
QPF+ G +K + D R +++ + + +L ENV+GF S+ + I
Sbjct: 82 QPFSSAGNRKSMDDHRGGLFESVMDIVDK-KKPKVVLFENVRGFISSKDDKGVLMPERIK 140
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ L G+ LL + F VP +R R ++ R
Sbjct: 141 NELLTHGYHTYWKLLKASDFEVPQNRHRVIIVGVR 175
>gi|421205706|ref|ZP_15662773.1| modification methylase HpaII domain protein [Streptococcus
pneumoniae 2090008]
gi|395578127|gb|EJG38655.1| modification methylase HpaII domain protein [Streptococcus
pneumoniae 2090008]
Length = 181
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
gi|373121713|ref|ZP_09535580.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654587|gb|EDR98716.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664692|gb|EHO29861.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 476
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 16 AIDINTSANSVYKHNFP---RTNLRGRNIQSFSIEEINAM----SPDVILMSPPCQPFTR 68
A DI Y HN P R N+ +I + IE I + S DV++ PPCQ F+
Sbjct: 132 ANDIEPCCVDTYAHNHPDTPRENIILGDINNV-IENITELQRFSSVDVVVGGPPCQGFSM 190
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
Q+ I D R ++ + +I S + ++ENVKG + S+ + T G++
Sbjct: 191 ANRQRLIDDPRNKLYKSYVKVV-SIVSPKFFVMENVKGMKSVSSQ--VIEDFTNIGYKVS 247
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FGVP +R R I +
Sbjct: 248 CRILNAKDFGVPQNRERLIFIGNK 271
>gi|414079463|ref|YP_007000887.1| DNA 5-cytosine methylase [Anabaena sp. 90]
gi|413972742|gb|AFW96830.1| DNA 5-cytosine methylase [Anabaena sp. 90]
Length = 415
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+++ +++I+ +++K NFP + ++++ + +EI S DV+ PPC
Sbjct: 26 GFDILASVEIDPIHCAIHKFNFPFWTVICKSVEETTGKEIRNSSQIANQEIDVVFGGPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML--- 120
Q F+ G ++ D R + + + I + + + +LENVKG + ++ I ++
Sbjct: 86 QGFSLIG-KRSFDDPRNSLVFHFIRLVVEL-QPKFFVLENVKGMTVGKHKEFIAEIINQF 143
Query: 121 TRAGFRFQE--FLLSPTQFGVPNSRTRYYLIAKRSP---AAHSSEASFCFETSSELMTEL 175
T +G++ +L+ +GVP +R R +L+ R + + +F +TS + L
Sbjct: 144 TESGYQIDANYQVLNAANYGVPQNRERLFLLGAREDLELPKYPEKITFPNQTSPTVWDAL 203
Query: 176 PKLKANTCNPLL 187
L A P L
Sbjct: 204 QDLPAIENYPEL 215
>gi|302348094|ref|YP_003815732.1| cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15]
gi|302328506|gb|ADL18701.1| Cytosine-specific DNA methylase [Acidilobus saccharovorans 345-15]
Length = 327
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
VV A++ + YK NFP T L +I+ S I +S DV++ SPPC
Sbjct: 20 GFNVVAAVENDPPVAKTYKANFPETYLIADDIKDVSEPTIKDVSGYGRGDVDVVIASPPC 79
Query: 64 QPFTRTG-----------LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS 112
+PFT T L I A+ + E P + ++ENV G
Sbjct: 80 EPFTPTNRRRMQDPVDRILSDPIGQLYLHAIRLIGELKP-----KYFVIENVSGVAEGPI 134
Query: 113 RDLITSMLTRAGFRFQEF-LLSPTQFGVPNSRTRYYL 148
R +I L R+G+ F ++ ++G PN R R ++
Sbjct: 135 RKVIEDELRRSGYDEVYFNIIRSEKYGAPNERVRAFV 171
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ A++I+ +V+++NFP ++ +I S ++I S DV+ PPC
Sbjct: 34 GFDVLAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSSDKIRIYSSIKNQDIDVVFGGPPC 93
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G ++ + D R + + + + + + + ENVKG + ++ I ++ +
Sbjct: 94 QGFSLMG-KRLLEDPRNLLVFHFVRIVAEL-KPKFFVFENVKGMASGKHQNFIQELINKF 151
Query: 123 --AGFRFQE--FLLSPTQFGVPNSRTRYYLIAKRS 153
G++ Q+ +L+ +GVP R R +L+ R
Sbjct: 152 EYYGYQVQQPYQVLNAAYYGVPQKRERLFLLGCRE 186
>gi|385222540|ref|YP_005771673.1| type II DNA modification enzyme [Helicobacter pylori SouthAfrica7]
gi|317011319|gb|ADU85066.1| type II DNA modification enzyme [Helicobacter pylori SouthAfrica7]
Length = 321
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G I + + DV++ P
Sbjct: 17 RLGLERCHLKCVGHAEINDEALRTYELFFKDTHNFG---DLMRINPNDLPNFDVLISGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSM 119
CQ F+ G +K + D R T + L+ I I +C LLENVKG + + ++I
Sbjct: 74 CQAFSINGKRKGLDDERGTIIYGLVH-ILEIKQPKCFLLENVKGLINHKQQETFEIIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
L G+ +L+ F + R R Y++ R HS
Sbjct: 133 LQEVGYTTYHQILNSADFQLAQKRERLYIVGFRKDLKHS 171
>gi|422855126|ref|ZP_16901784.1| modification methylase ScrFIA [Streptococcus sanguinis SK1]
gi|327463103|gb|EGF09424.1| modification methylase ScrFIA [Streptococcus sanguinis SK1]
Length = 346
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E+V A DI+ SAN +++ NF T RN++ EI + D++ PCQ F+ +
Sbjct: 35 QIEIVYANDIDDSANKMFEKNFGITP-DNRNVREVKSNEIPSF--DILTGGFPCQSFSVS 91
Query: 70 GLQKD---IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRA 123
I D + T ++ + A + ENVKG + +++ LI +A
Sbjct: 92 AQNPKRLGIKDEKGTLFFEMVRVLKA-HQPKAFFAENVKGILSANNKEAFPLIIEEFEKA 150
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
G+ L T++GVP R R +++ R + +F FE E
Sbjct: 151 GYNVSYKLCVATKYGVPQKRERVFIVGIR------KDLNFTFEFPEE 191
>gi|323650700|gb|ADX97434.1| M2.BspACI [Psychrobacillus psychrodurans]
Length = 444
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMS 60
L S ++V + +I+ A Y+ NFP NL G I +I+A + D+++
Sbjct: 102 LEESNVSGKIVFSSEIDRFAKISYEANFPNHNLHG------DITKIDAKDVPNHDLLIGG 155
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQ F+ G ++ D R T L + + I + LLLENVK + S++ +I
Sbjct: 156 FPCQAFSIAGSREGFEDIRGT-LFFDVARIIREKKPEFLLLENVKNLVSHDNSKTIRVIL 214
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ +++ ++ GVP SR R Y++A
Sbjct: 215 NTLNELGYTVDFTIINSSEAGVPQSRDRTYIVA 247
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM------SPDVILMSPPC 63
+++ A+D++ A + + NFP T+ ++I+ ++ + S + PC
Sbjct: 39 GMDIAFALDVDKDAKNTFTKNFPSTDFCDKSIKKLTVLDFQHTLDKYKDSYKLFCGCAPC 98
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD-----LITS 118
QPFT+ + D R L+Y TI + +ENV G + +
Sbjct: 99 QPFTKQNTESPKQDERKDLLTYF-GTIVKECEPDFVFVENVPGLQKVPNHKHGPFPAFEE 157
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS------PAAHSSEASFCFETSSELM 172
+L + ++ +++ +G P R R+ L+A R H ++ ++T + +
Sbjct: 158 LLHKLNYQIAYGVVAAQDYGAPQLRRRFVLLASRHGEISIPEPTHGKDSDTPYKTVYDAI 217
Query: 173 TELPKLKA-------NTCN---PLLSRMTLHGILDSTHPSG 203
+LP + A N N +LS + L I STH G
Sbjct: 218 ADLPAITAGESYAGNNVLNHRAAMLSEINLERIKASTHDGG 258
>gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|386751241|ref|YP_006224461.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|386752834|ref|YP_006226053.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|384557499|gb|AFH97967.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|384559092|gb|AFH99559.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
Length = 327
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTRLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|399065983|ref|ZP_10748133.1| DNA-methyltransferase Dcm [Novosphingobium sp. AP12]
gi|398028928|gb|EJL22429.1| DNA-methyltransferase Dcm [Novosphingobium sp. AP12]
Length = 367
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-AMSPDV--ILMSPPC 63
HA V A DI+ S Y+ NFP T L R+I S + EI ++ +V + PPC
Sbjct: 18 HAAGFNVTCAYDIDPILTSSYRLNFPATKLYLRDISSLTGAEIERDVAGEVFGVFGGPPC 77
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML--T 121
Q F+ G ++DI+D R L + + + ++ENV+G + ++ L
Sbjct: 78 QGFSDMG-RRDISDPRRDLLGHFFRVVSELQPC-FFIMENVRGLSYPDALPVLNDALDQV 135
Query: 122 RAGFRFQE-FLLSPTQFGVPNSRTRYYLIAKR 152
R + E ++ + FG +R R +++ R
Sbjct: 136 RKDYDLTEPWIWNAADFGAATNRNRLFVVGVR 167
>gi|425457191|ref|ZP_18836897.1| Modification methylase DdeI (fragment) [Microcystis aeruginosa PCC
9807]
gi|389801524|emb|CCI19317.1| Modification methylase DdeI (fragment) [Microcystis aeruginosa PCC
9807]
Length = 249
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS----IEEINAMSPDVILMSPPCQPFT 67
+++ +++ + A + N + + ++I+ F I+ + +++PD+I+ PPCQ F+
Sbjct: 28 DLLCSLEFDQWACDTLRENDKQQVVVEKDIRDFQAPDEIKSVCSITPDLIIGGPPCQGFS 87
Query: 68 RTG-LQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF------EGSRSRDLITS 118
G QKD D R S ++ + LQ ++ENVKG R D+I +
Sbjct: 88 IAGPAQKDPKDPRN---SLFVDFARWVEYLQPTAFVMENVKGLLSRKNAAHERVIDIIQN 144
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ + ++L+ FGVP +R R +++
Sbjct: 145 TFENIGYSVELWVLNAANFGVPQTRERIFIVG 176
>gi|116748761|ref|YP_845448.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116697825|gb|ABK17013.1| DNA-cytosine methyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 429
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 24/156 (15%)
Query: 17 IDINTSANSVYKHNFPRTNL-RGRNIQSFS----IEEINAMSPDVILMS--PPCQPFTR- 68
+++ A K N P L +I S +E+ N ++ L+S PPCQPF++
Sbjct: 50 VEVAKDAQETLKVNRPHWKLAEPGHIHQISPPEILEQSNLRRGELALLSGGPPCQPFSKS 109
Query: 69 ---TGLQKDIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGSRSRDLITSMLT--- 121
TG ++ + D R + L ++ + A+P + +LLENV+G + +RD +L
Sbjct: 110 AYWTGGRQGLRDPRASGLRAYLDVVEVALP--KVILLENVRGLAPNGNRDGGLKLLADGI 167
Query: 122 -----RAG--FRFQEFLLSPTQFGVPNSRTRYYLIA 150
R G ++ Q F L+ +GVP SR R +L+A
Sbjct: 168 RDINRRLGSAYKLQVFHLNAVNYGVPQSRERVFLLA 203
>gi|386754039|ref|YP_006227257.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
gi|384560297|gb|AFI00764.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
Length = 327
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTRLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|197124333|ref|YP_002136284.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174182|gb|ACG75155.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 657
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 28/155 (18%)
Query: 55 DVILMSPPCQPFTRTGLQKDIA--------DARCTALSYLIETIPAIPSLQCLLLENVKG 106
DV++ +PPCQ F+ G + +A D R YL++ I + L+ENV G
Sbjct: 335 DVLVGAPPCQGFSTVGFRSKMARTGYRLLEDDRNFLFEYLVK-IALYLRPRLFLMENVPG 393
Query: 107 FEGSRSRDL-----ITSMLTRAG-FRFQEFLLSPTQFGVPNSRTRYYLIAKRS--PAAHS 158
+ +R DL ML RAG +R + L+ T FGVP RTR +L+A P A +
Sbjct: 394 MQTARRDDLSFLDAAARMLERAGHYRTVTWQLNATTFGVPQDRTRCFLVASDGTLPIAPA 453
Query: 159 SE------ASFCFE-----TSSELMTELPKLKANT 182
E +F + T E + +P+++A T
Sbjct: 454 GEYQDLRRPNFDVDALPPITLDEALLGIPRMRAGT 488
>gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
Length = 327
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVVANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVRNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFRK 165
>gi|386284381|ref|ZP_10061603.1| two-component sensor [Sulfurovum sp. AR]
gi|385344666|gb|EIF51380.1| two-component sensor [Sulfurovum sp. AR]
Length = 492
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-NAMSP------DVILMSPPCQ 64
+V A DI A YK+N P ++ I S I+EI N + DVI+ PPCQ
Sbjct: 138 KVELANDIEPVALETYKYNHP--DISTDKILSGDIKEIVNNIDNHVDTDIDVIIGGPPCQ 195
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAG 124
F+ Q+ I D R +Y ++ + I + +L+ENV+G + D + R G
Sbjct: 196 SFSSANQQRVIDDPRNVLYTYYVKAVEKIQP-KFVLMENVRGM--IKVADQVVEDFNRIG 252
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+ + L ++F V R R I A T S+LM E+
Sbjct: 253 YDVEYRLFDSSEFSVAQKRVRLLYIGVNRVYAKKHNI-----TPSQLMKEV 298
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTG 70
+ + +IDI+ A + +H+F N+ +NI + + P D+ PPCQ F++ G
Sbjct: 173 QTIASIDIDRDACTSLEHHFANKNVICQNIIDITQPKSLMSQPLDLSYGGPPCQSFSQAG 232
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRAGFRF 127
QK ++D R + I + + + LLENVKG +G + LI + + G+
Sbjct: 233 KQKGLSDPRGNLIYEFIRFLSDL-NPNYFLLENVKGLQGINNGQLLHLIIDDIRKLGYNV 291
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAA--------HSSEASFC---FETSSELMTELP 176
+++ +G P R R ++ + H++EA+ ++T + + LP
Sbjct: 292 TFGVVNAADYGTPQLRKRIIILGCKQDLGFVNLPLPTHATEANLLLQPYKTVGQALQNLP 351
>gi|420445573|ref|ZP_14944484.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-42]
gi|393062131|gb|EJB62990.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-42]
Length = 327
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V A + + + Y+ N T L ++I++ EIN S D I+ PPCQ ++
Sbjct: 21 GFKIVIANEYDKNITPTYRLNHKNTQLLEKDIKNLQTSEIN-FSVDGIIGGPPCQSWSEA 79
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G K I DAR + + + + L ENV+G R + ++L G+
Sbjct: 80 GNLKGIDDARGQLFYEYLRLLRELKP-KFFLAENVRGMLAQRHETSVKNILNAFKECGYE 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
L++ +GV R R + I R
Sbjct: 139 VNTHLVNAKDYGVAQERLRVFYIGFR 164
>gi|59802210|ref|YP_208922.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090]
gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
DGI18]
gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA6140]
gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
PID24-1]
gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|385336778|ref|YP_005890725.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae]
gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA 1090]
gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 333
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFPR L +++ + + +++ N S D+++ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLTEQDLTNCLNGQSVDLVIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|345867871|ref|ZP_08819872.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344047793|gb|EGV43416.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 387
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 25/184 (13%)
Query: 16 AIDINTSANSVYKHNFP-----RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
A D++ + Y HNFP R +LR +I + I+ I + +PDV++ PPCQ F+
Sbjct: 27 ASDVDENCEKTYTHNFPNVPFIRNDLR--DISTAEIKSIISRTPDVVIGGPPCQGFSLAN 84
Query: 71 LQKD--IADARCTALSYLIETIPAIPSLQ--CLLLENVKGFEGSRSRDLITSM---LTRA 123
++ +D R L Y E + + LQ ++ENV+G + ++I M A
Sbjct: 85 KNRNKVKSDPR-NELFY--EFVRVVTDLQPKAFVMENVRGLLSMQKGEVIKLMKEEFENA 141
Query: 124 GFRFQ---EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE-ASFCFE---TSSELMTELP 176
G +Q + LL+ + +GVP +R R +I R + +E T E +++LP
Sbjct: 142 GIGYQVDYKVLLA-SDYGVPQNRHRVIMIGIRKDLEKQPLFPNKTYENPVTVWEAISDLP 200
Query: 177 KLKA 180
++KA
Sbjct: 201 QIKA 204
>gi|331091354|ref|ZP_08340194.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404515|gb|EGG84059.1| hypothetical protein HMPREF9477_00837 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 391
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 87/211 (41%), Gaps = 29/211 (13%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H E V A +I+ A YK N+ G NI+ E+I DV+ PCQ F
Sbjct: 22 HNLGGECVFASEIDKYAIETYKTNYGVD--AGINIRDVHEEDIPEH--DVLCAGFPCQAF 77
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
++ G QK D L + I I ++LENV+ + + +I S L
Sbjct: 78 SKAGYQKGFEDETRGTLFFEIVRILKYHRTPYIILENVRNLTSHDHGNTWRVIKSALHEL 137
Query: 124 GFRFQE--FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKAN 181
G+ E ++SP Q GVP R R ++ HSS L ELP +
Sbjct: 138 GYIITEEPIIISPHQLGVPQFRERVVIL-----GIHSSLG------IQNLNIELPDKSKD 186
Query: 182 TCNPLLSRMTLHGILDSTHPSGDLYRRYLVS 212
N L S GIL++T D+ +Y +S
Sbjct: 187 DINFLTS-----GILETT----DVDEKYYIS 208
>gi|212695555|ref|ZP_03303683.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
gi|212677433|gb|EEB37040.1| hypothetical protein ANHYDRO_00072 [Anaerococcus hydrogenalis DSM
7454]
Length = 321
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y N+ ++ G I + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKIPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELENLGYESKYEILNAMDFGIPQKRDRIFVVS 169
>gi|307244197|ref|ZP_07526312.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
gi|306492347|gb|EFM64385.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus stomatis
DSM 17678]
Length = 534
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E+V A D ++ A VY+ NF + R ++E D++ PCQPF+ G
Sbjct: 218 EIVYANDFDSDAQRVYEKNFGEIDKRS----ILDVDEKEIPDCDILTAGFPCQPFSNAGN 273
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR------DLITSMLTRAGF 125
++ + D+R + I + ++ ENV+G ++ + I S L G+
Sbjct: 274 RRGVNDSRGNLYKECLRVINE-KHPKVVVFENVRGLLSTKDENGNPLIETIISNLYELGY 332
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRS--------PAAHSSEA---SFCFETSSELMTE 174
+ L++ + +GVP +R R ++A R P S E C + E+ +
Sbjct: 333 KTTYKLVNASSYGVPQNRIRVIVVAFRKDLNKMFIFPEEQSKEGLNIGMCLDIPEEVPNQ 392
Query: 175 L 175
+
Sbjct: 393 V 393
>gi|260909972|ref|ZP_05916659.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635922|gb|EEX53925.1| modification methylase EcoRII [Prevotella sp. oral taxon 472 str.
F0295]
Length = 370
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 14 VTAIDINTSANSVYKHNF----PRTNLRGRNIQSFSI-EEINAMSP------DVILMSPP 62
V A + + +A Y+ N+ P +G N Q E+IN P D+ P
Sbjct: 30 VFASEWDKNARLSYEANYIESEPHLFKKGGNGQYLYFNEDINHAIPSEMPNFDICCGGFP 89
Query: 63 CQPFTRTGLQKDIADARCTAL----SYLIETIPAIPSLQCLLLENVKGFEG---SRSRDL 115
CQPF+ GL++ D R T + + E + A + L LENV+G + ++ ++
Sbjct: 90 CQPFSVAGLKRGFDDTRGTLFFNIANIVREKVRAGHPPRVLFLENVRGLKNHDKGKTLNV 149
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G+ + +L+ FGVP +R R ++IA
Sbjct: 150 ILATLDELGYNYSHEVLNAKYFGVPQNRERLFIIA 184
>gi|406700893|gb|EKD04053.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 513
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 22/153 (14%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
E+ A+D S + NFP T + R + S + +I +S +++ PPCQ FTR
Sbjct: 252 FELKLAVDTEDSCVQTLRANFPATRVLQREVGSLTAADIGEVS--LLVAGPPCQAFTRAN 309
Query: 71 LQKDIADARCTALSYLI----ETIPAIPSLQCLLLENVKGFE---GS------RSRDLIT 117
+ + DAR + L+ +T+P Q +L+ENV G + GS + D++
Sbjct: 310 HNRKV-DARGHEPARLLRLISQTLP-----QLVLIENVPGIKDRCGSDDVAWNAAEDVVR 363
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S+L G++ + +L +G P R R +++
Sbjct: 364 SLLG-LGYQVRWAVLDAASYGAPQYRKRLFVLG 395
>gi|170077805|ref|YP_001734443.1| Type II cytosine-5 DNA methyltransferase [Synechococcus sp. PCC
7002]
gi|462645|sp|P34882.1|MTAA_SYNP2 RecName: Full=Modification methylase AquI subunit alpha;
Short=M.AquI subunit alpha; Short=M.AquiA; AltName:
Full=Cytosine-specific methyltransferase AquI subunit
alpha
gi|2126509|pir||I39659 modification methylase AquI, alpha protein - Synechococcus sp. (PCC
7002)
gi|142180|gb|AAA22067.1| M.AquI alpha protein [Synechococcus sp. PCC 7002]
gi|169885474|gb|ACA99187.1| DNA-cytosine methyltransferase [Synechococcus sp. PCC 7002]
Length = 248
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIE------EINAMSPDVILMS 60
HA A++ + S + + N P T + +I S + + ++N + D+++
Sbjct: 20 HAAGFSTAVAVEQDPSCCNTLRLNMPDTPVIEGDITSITTQVILEAAKVNPLEIDLVIGG 79
Query: 61 PPCQPFTRTGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM 119
PPCQ F+ G + + D R L +L A+P +C ++ENVKG + ++
Sbjct: 80 PPCQSFSLAGKRMGMDDPRGMLVLEFLRVVREALP--KCFVMENVKGMINWSKGKALEAI 137
Query: 120 LTRAG----FRFQEF-------LLSPTQFGVPNSRTRYYLIAKR 152
+T A + +E+ +L+ FGVP R R +++ R
Sbjct: 138 MTEASQPIKYAGKEYKYAVSYHVLNAADFGVPQFRERVFIVGNR 181
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 8 AFSLEV---VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMS 60
F LE V +++ + Y++NFP L ++IQ S E IN + DVI+
Sbjct: 18 GFDLEGFKNVFSVEYDLQTAQTYRYNFPNHVLINKDIQEISTNEIKKIINNNTVDVIIGG 77
Query: 61 PPCQPFTRTGL--QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRD 114
PPCQ F+ G + I D R + + +I + ++ENV +G R+
Sbjct: 78 PPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFV-SILKPKIFIIENVARLVSHNKGKTIRE 136
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
+ S + + G++ + +L + + +P R R +++ ++ + E T E +++
Sbjct: 137 IQES-IEKLGYKVKYEILQTSDYNIPQKRQRVFIVGYKNIEFNYPEKLKRKVTIKEAISD 195
Query: 175 LPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSD 213
LP LK N S++ H ++ H LY+ +SD
Sbjct: 196 LPPLK----NGEKSKIPNHFAMN--HSQEMLYKMSFISD 228
>gi|304390602|ref|ZP_07372555.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326358|gb|EFL93603.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 321
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 12 EVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+VV A D A +YK NF P N+ ++ I I PDVI+ PPCQ ++
Sbjct: 47 QVVAAFDNWQPAVDIYKENFQHPIHNIDLATDEALEI--IEQAKPDVIIGGPPCQDYSIA 104
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G +K A T + + + P + ++ ENV E + ++ +ML+ AG+
Sbjct: 105 GKRKLGQRANLT-IRFAEIVVRVKP--KWVVFENVYNIERFSTLPVMKAMLSDAGYGLSS 161
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP R R++L+ +
Sbjct: 162 KVLDASLCGVPQKRRRFFLVGR 183
>gi|379059514|ref|ZP_09850040.1| DNA-cytosine methyltransferase [Serinicoccus profundi MCCC 1A05965]
Length = 471
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR- 113
DV+ PCQPF+++G Q+ + +AR T L + I I + +LLENV+ G R R
Sbjct: 80 DVLAAGFPCQPFSKSGYQRGMDEARGT-LFWNIARILEERKPRVVLLENVRNIAGPRHRH 138
Query: 114 --DLITSMLTRAGFR-------FQEFLLSPTQFGVPNSRTRYYLIA 150
++I L G+R F LL P++ G P R R +++
Sbjct: 139 EWEVIIQTLREIGYRVSATPSVFSPHLLPPSRGGTPQVRDRVFILG 184
>gi|332879681|ref|ZP_08447373.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332682372|gb|EGJ55277.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 299
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + F+ + ID + AN YK+NFP G +I+ N D+I PC
Sbjct: 20 AGYNFTEHYFSEIDKHAIAN--YKYNFPNAKHIG---DITTIQPANLAGADIITFGSPCV 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
F+ G + +A + + + Y I I + PS+ + ENVKG S +R ++L
Sbjct: 75 DFSVAGRRAGLAGTKSSLIQYAIALITCVRPSV--FIWENVKGAFSSNARADFWAILQAF 132
Query: 123 ---AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
G+R + LL+ T + +P +R R YL+ A S F TE +++
Sbjct: 133 ANIGGYRLEWQLLN-TSWVLPQNRERIYLVGHL--AGRSETGVFPIREDDFFTTEKAQIQ 189
Query: 180 ANTCNPLLSRMTLHG 194
+ T P+ + + G
Sbjct: 190 SQT--PICTTLKASG 202
>gi|331002102|ref|ZP_08325621.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411196|gb|EGG90612.1| hypothetical protein HMPREF0491_00483 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 309
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 15 TAIDIN--TSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
ID N S N++YK NF ++ G + + +I D+++ PCQ F+R G +
Sbjct: 27 VEIDKNCVKSYNALYKANFKSKDIVGYHAPNENI--------DLLMHGSPCQDFSRVGQK 78
Query: 73 KDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRDLITSM------LTR 122
K T S L ETI I + + +L ENVKG +++ TS + R
Sbjct: 79 KGGEKGSGTRSSLLFETIRIIEKMNMRPKVVLWENVKGV---LDKNMRTSFFHYLREMER 135
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ + +L+ FG+P R R ++++
Sbjct: 136 LGYESKYEILNAMDFGIPQKRERIFVVS 163
>gi|328947436|ref|YP_004364773.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447760|gb|AEB13476.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 439
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ + + V + + + +A Y N+ +I I+++ DV+ P
Sbjct: 109 RLAMQSCGGQCVFSSEWDDAAKQTYFENYGEVPFG--DITKTEIKDLIPKKFDVLCAGFP 166
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT- 121
CQPF+ +G +K D L + I I + + + LENVKG ++ + I ++ T
Sbjct: 167 CQPFSYSGQKKGFEDKTRGTLFFEICEILKVHRPKFIFLENVKGLISHKNGETIATIRTI 226
Query: 122 ---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ E +LS F +P R R+Y +
Sbjct: 227 LKDELGYDIHEVILSSLDFELPQKRERWYCVG 258
>gi|218247578|ref|YP_002372949.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218168056|gb|ACK66793.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 727
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + V + +IN VY +NF P ++ N + + DV+
Sbjct: 19 RLAFEQAQYQCVYSCEINEYCQKVYYNNFDECPDNDVTKINPHTLP-------NFDVLTA 71
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G ++ D R T Y+ + I A Q ++LENVK + ++ + I
Sbjct: 72 GFPCQPFSICGKKEGFNDTRGTLFFYICQIIAA-KQPQAVILENVKHLIHHQQGKTLETI 130
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
L G+ LL+ FGVP R R +IA R
Sbjct: 131 IYSLEDLGYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|401882061|gb|EJT46335.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 2479]
Length = 569
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 22/153 (14%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
E+ A+D S + NFP T + R + S + +I +S +++ PPCQ FTR
Sbjct: 260 FELKLAVDTEDSCVQTLRANFPATRVLQREVGSLTAADIGEVS--LLVAGPPCQAFTRAN 317
Query: 71 LQKDIADARCTALSYLI----ETIPAIPSLQCLLLENVKGFE---GS------RSRDLIT 117
+ + DAR + L+ +T+P Q +L+ENV G + GS + D++
Sbjct: 318 HNRKV-DARGHEPARLLRLISQTLP-----QLVLIENVPGIKDRCGSDDVAWNAAEDVVR 371
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S+L G++ + +L +G P R R +++
Sbjct: 372 SLLG-LGYQVRWAVLDAASYGAPQYRKRLFVLG 403
>gi|416217112|ref|ZP_11624061.1| type II DNA modification enzyme [Moraxella catarrhalis 7169]
gi|416250064|ref|ZP_11637073.1| type II DNA modification enzyme [Moraxella catarrhalis CO72]
gi|326560963|gb|EGE11328.1| type II DNA modification enzyme [Moraxella catarrhalis 7169]
gi|326575187|gb|EGE25115.1| type II DNA modification enzyme [Moraxella catarrhalis CO72]
Length = 322
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQ F+ G + + D R + YL + + + +LENVKG
Sbjct: 60 DVMLAGFPCQTFSIVGKRAGLDDNRGQIIYYLTDILKQ-KKVSFFILENVKGLINHNKGE 118
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+ + I S+L AG+ +L +GVP R R Y + R H
Sbjct: 119 TLNFILSLLLEAGYDVYHQVLDSQYYGVPQMRQRVYFVGIRKDIKH 164
>gi|440680639|ref|YP_007155434.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428677758|gb|AFZ56524.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 329
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-------AMSPDV 56
L + E+ A + A +VY+ NF I + + ++N PDV
Sbjct: 24 LGFQNYGFEISAAFENWKPAINVYQQNF------NHPIIEYDLSQVNNDYSIFKKFLPDV 77
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLI 116
I+ PPCQ F+ G + + D LS I A + Q ++ENV F S
Sbjct: 78 IIGGPPCQDFSSAGKRNE--DLGRGDLSITFAEIVANVASQWFVIENVDLFRKSNKYQEF 135
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
+L AG+ E +L + GVP R R++ I +
Sbjct: 136 RQILKSAGYGLTEKVLDASLCGVPQKRKRFFCIGE 170
>gi|226349837|ref|YP_002776950.1| modification methylase [Rhodococcus opacus B4]
gi|226245752|dbj|BAH47019.1| modification methylase [Rhodococcus opacus B4]
Length = 428
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTGLQKD 74
A++++T+A + K N P ++ ++ ++ + + D++ PC PF+ G Q
Sbjct: 40 AVELDTNACATLKLNRPDWDVEEGDVADPTVWKPSEHEGVDLLAGGVPCPPFSIAGKQLG 99
Query: 75 IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRFQEFL 131
+D R ++ +ET I + L+LENV+G R R I LT G+ L
Sbjct: 100 ASDER-DLFAWAVETAGQI-QPRALMLENVRGLSAPRFAAYRQRILDRLTEFGYVADWRL 157
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAA---HSSEASFCFETSSELMTEL 175
L + +GVP R R+ L+A R A H E + +T + +L
Sbjct: 158 LQASDYGVPQLRPRFVLVALRQEDAAYFHWPEKTPTQDTVGSALKDL 204
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE------INAMSPDVILMSPPCQP 65
+VV A+D N A Y NFP + ++ + ++ I D++ PPCQ
Sbjct: 26 DVVLAVDNNEKALEAYNSNFPDKITKNLDLSTADQDDILSNTGITKEEVDIVTGGPPCQG 85
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR--- 122
F+ G ++D D R L E I + S ++ENVKG R+ + L
Sbjct: 86 FSVMG-KRDPDDERNNLLLKYAEHISGL-SPDYFVMENVKGLMSGDKREFLEEFLNEIRS 143
Query: 123 AGFRFQEFL--LSPTQFGVPNSRTRYYLIAKR 152
AG+ E + L +FGVP R R ++ R
Sbjct: 144 AGYNIVEPIQVLDAAEFGVPQYRERVIVLGYR 175
>gi|416155884|ref|ZP_11604177.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1]
gi|416220226|ref|ZP_11625318.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1]
gi|416228466|ref|ZP_11627620.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1]
gi|326563801|gb|EGE14052.1| type II DNA modification enzyme [Moraxella catarrhalis 46P47B1]
gi|326566814|gb|EGE16953.1| type II DNA modification enzyme [Moraxella catarrhalis 103P14B1]
gi|326576727|gb|EGE26634.1| type II DNA modification enzyme [Moraxella catarrhalis 101P30B1]
Length = 327
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQ F+ G + + D R + YL + + + +LENVKG
Sbjct: 65 DVMLAGFPCQTFSIVGKRAGLDDNRGQIIYYLTDILKQ-KKVSFFILENVKGLINHNKGE 123
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+ + I S+L AG+ +L +GVP R R Y + R H
Sbjct: 124 TLNFILSLLLEAGYDVYHQVLDSQYYGVPQMRQRVYFVGIRKDIKH 169
>gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 328
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 24/191 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGR--NIQSFSIEEINAMSP--DVILMSPPCQP 65
++V A + + + Y+ N ++G NI S +M P D I+ PPCQ
Sbjct: 21 GFDIVAANEFDKTIWETYEKNHKTHLIKGDICNIHS-------SMFPECDGIIGGPPCQS 73
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDL---ITSMLTR 122
++ G K I D R L Y I + L ENVKG R D I S
Sbjct: 74 WSEAGSLKGIEDPR-GQLFYQYIRILKEKQPKFFLAENVKGMMSKRHNDAVKNIVSQFEE 132
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS---------PAAHSSEASFCFETSSELMT 173
AG+ LL+ + +GVP R R + I R P + + +F T
Sbjct: 133 AGYDVYIHLLNASDYGVPQDRKRVFYIGFRKDLNIKFDKPPKQYGYKVTFKDAIYDLKDT 192
Query: 174 ELPKLKANTCN 184
+P L+ N N
Sbjct: 193 AIPALEKNKTN 203
>gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus]
Length = 537
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-AMSPDVILMSPPCQPFTR 68
LEV A D+N +A + Y+ NFP T+ + F + + D++ +SPPCQ F+R
Sbjct: 247 GLEVKWAFDMNPNAGANYRRNFPNTDFFLAEAEQFIQLSVGISQHVDILHLSPPCQTFSR 306
Query: 69 ----TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML---T 121
G + +A A+ LI+ + P L +E G +SR I + L T
Sbjct: 307 AHTIAGKNDENNEASFFAVVNLIKAVR--PRL--FTVEETDGIMDRQSRQFIDTALMGIT 362
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE-ASFCFETSSELMTELPK--- 177
G+ F+ +L+ ++GV +R R +I AA E F T + ++ P+
Sbjct: 363 ELGYSFRICVLNAIEYGVCQNRKRLIIIG----AAPGEELPPFPLPTHQDFFSKDPRRDL 418
Query: 178 LKANTCNPLLSRMT 191
L A T + LS +T
Sbjct: 419 LPAVTLDDALSTIT 432
>gi|317501747|ref|ZP_07959934.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|336439618|ref|ZP_08619228.1| hypothetical protein HMPREF0990_01622 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896869|gb|EFV18953.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|336015678|gb|EGN45483.1| hypothetical protein HMPREF0990_01622 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 499
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 10/156 (6%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
E L + V + +I A Y+ F + G Q IE D +L
Sbjct: 85 EGLREVGLEAKCVFSSEIKKYAIKAYQGYFGNEKVYGDITQ---IETDTIPDFDFLLAGF 141
Query: 62 PCQPFTRTGLQKDIADARCTAL----SYLIETIPAIPSLQCLLLENVKGF---EGSRSRD 114
PCQPF+ G AD R T L E + A + + LLENV+G +G +
Sbjct: 142 PCQPFSSAGKGLGFADTRGTMFFEIERILKEKMDAGKAAKGFLLENVEGLVNHDGGNTLA 201
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+I L + G+ L+ FG+P SR R Y++
Sbjct: 202 VIMDHLQKLGYNVNYKLIDSQYFGLPQSRKRVYIVG 237
>gi|291514217|emb|CBK63427.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301]
Length = 296
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGR--NIQSFSIEEINAMSPDVILMSP 61
L F+ + V +I+ A + +KHNFP G +I SIE PD+I
Sbjct: 17 LRQAGFTFDKVYFSEIDRHAVANFKHNFPHAQHVGSVCDITGTSIER-----PDIITFGS 71
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSR-SRDL--IT 117
PCQ F+ G + A + + Y I+ I P + + ENVKG R RD I
Sbjct: 72 PCQNFSAAGNGLGLQGAESSLIRYAIKAIDYFRPDI--FIWENVKGVLFERHCRDFWAIV 129
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
L G E+ L T + +P +R R YL+ +
Sbjct: 130 KALADIGVYQIEWQLLNTAWILPQNRERIYLVGR 163
>gi|119026301|ref|YP_910146.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
gi|118765885|dbj|BAF40064.1| DNA-methyltransferase MKpn2kI [Bifidobacterium adolescentis ATCC
15703]
Length = 383
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTG 70
++VV + +IN + Y NF +I + +I D+++ PCQ F++ G
Sbjct: 95 VKVVFSSEINKFSAKTYHANF--GEYPAGDITQIAASDI--PDHDILVGGFPCQAFSQAG 150
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRF 127
L+K DAR T + + I I + LLENVK G + + I S+L G+
Sbjct: 151 LKKGFEDARGT-MFFEIARILKEKRPKAFLLENVKNLVGHDHGNTFRTIKSILEGLGYAV 209
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
+L+ FGVP +R R Y++
Sbjct: 210 NAKVLAAKDFGVPQNRERIYIVG 232
>gi|91213886|ref|YP_543872.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110644679|ref|YP_672409.1| modification methylase [Escherichia coli 536]
gi|191170832|ref|ZP_03032384.1| modification methylase HgiDII [Escherichia coli F11]
gi|300974517|ref|ZP_07172633.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|386606922|ref|YP_006113222.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|422366411|ref|ZP_16446879.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|422377725|ref|ZP_16457960.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|432443967|ref|ZP_19686287.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|432444295|ref|ZP_19686608.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|432454611|ref|ZP_19696824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|432469689|ref|ZP_19711743.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|432516593|ref|ZP_19753803.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|432571672|ref|ZP_19808168.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|432653865|ref|ZP_19889596.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|432701721|ref|ZP_19936859.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|432716220|ref|ZP_19951239.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|432748179|ref|ZP_19982835.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|432988209|ref|ZP_20176908.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|432993425|ref|ZP_20182049.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|433012735|ref|ZP_20201117.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|433022308|ref|ZP_20210333.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|433061115|ref|ZP_20248102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|433076824|ref|ZP_20263389.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|433100073|ref|ZP_20286184.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|433118431|ref|ZP_20304182.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|433142922|ref|ZP_20328102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|433197111|ref|ZP_20381039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|433327076|ref|ZP_20403659.1| DNA-cytosine methyltransferase [Escherichia coli J96]
gi|91075460|gb|ABE10341.1| hypothetical protein UTI89_C4938 [Escherichia coli UTI89]
gi|110346271|gb|ABG72508.1| modification methylase [Escherichia coli 536]
gi|190909056|gb|EDV68643.1| modification methylase HgiDII [Escherichia coli F11]
gi|300308872|gb|EFJ63392.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 200-1]
gi|307629406|gb|ADN73710.1| DNA-cytosine methyltransferase [Escherichia coli UM146]
gi|315290903|gb|EFU50272.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 153-1]
gi|324010993|gb|EGB80212.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 60-1]
gi|430960119|gb|ELC78286.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE189]
gi|430977377|gb|ELC94218.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE191]
gi|430986963|gb|ELD03525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE201]
gi|431000237|gb|ELD16305.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE206]
gi|431036777|gb|ELD47766.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE224]
gi|431113151|gb|ELE16832.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE55]
gi|431186073|gb|ELE85648.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE87]
gi|431238754|gb|ELF33409.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE169]
gi|431249948|gb|ELF44102.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE8]
gi|431288452|gb|ELF79215.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE43]
gi|431491428|gb|ELH71034.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE215]
gi|431512402|gb|ELH90526.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE218]
gi|431535562|gb|ELI11902.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE104]
gi|431540917|gb|ELI16370.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE106]
gi|431562253|gb|ELI35566.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE124]
gi|431600852|gb|ELI70517.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE131]
gi|431622501|gb|ELI91191.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE145]
gi|431626909|gb|ELI95324.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE153]
gi|431666881|gb|ELJ33505.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE168]
gi|431725573|gb|ELJ89421.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE94]
gi|432345091|gb|ELL39614.1| DNA-cytosine methyltransferase [Escherichia coli J96]
Length = 348
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFP-----RTNLRGRNIQSFS-IEEINAMSP 54
+E L F +E+ +DI+ A+ +K NFP + ++R Q S I +I A P
Sbjct: 14 SEGLRQAGFDIEL--GLDIDQQASETFKANFPDAKFIQDDIRKIEPQDISDIIDIKAKRP 71
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALS----YLIETIPAIPSLQCLLLENVKGF--- 107
++ PCQPF++ K D+R L+ ++ E +P + ++LENV G
Sbjct: 72 LLLSACAPCQPFSQQNKNKTSDDSRRNLLNETHRFIRELLP-----EYIMLENVPGMQKI 126
Query: 108 --EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSE 160
E +L + + F+ + +G+P R R L+A R P +
Sbjct: 127 DEEKEGPFQEFIKLLKELEYNYISFIANAENYGIPQRRKRLVLLASRVGKVTLPEITHGK 186
Query: 161 ASFCFETSSELMTELPKLKANTCNP 185
F+T + + + KL + +P
Sbjct: 187 NKIPFKTVRDYIQDFTKLCSGETDP 211
>gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865]
Length = 360
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|421221549|ref|ZP_15678354.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
gi|395583369|gb|EJG43815.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
Length = 360
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|419467524|ref|ZP_14007404.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
gi|379542437|gb|EHZ07593.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
Length = 360
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|345808802|gb|AEO17041.1| type II modification DNA-cytosine methyltransferase [Bacillus sp.
N16-5]
Length = 372
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS-PDVILMSPPCQPFTRT 69
++ A DI +A VY+HNF N G N +S + ++N + DV++ PCQ F+
Sbjct: 57 FNIIFANDIFKAAMQVYEHNF---NHAGDN-ESITEVDLNKIPLADVVIGGFPCQDFSLA 112
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR--------DLITSMLT 121
G +K ++ R ++I + + + + ENV G +++ D I
Sbjct: 113 GKRKGLSSERGRLYEHMIRVVKHC-NAKMFVAENVDGIRTNKANKTVDASALDTILENFE 171
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
++G+ Q +L+ FGVP +R R + R
Sbjct: 172 KSGYIVQYKVLNAADFGVPQTRKRVIIFGVR 202
>gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 338
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILM 59
R++ + + V + + + VY NF +I I +IN S D++
Sbjct: 25 RIALESLGAKCVYSNEWDKPVRKVYTDNFG-------DIPEGDITQINENSIPEHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G Q+ D+R T L + + I + + +ENVK F + ++ ++
Sbjct: 78 GFPCQAFSISGKQRGFEDSRGT-LFFDVARIVKAKKPKIVFMENVKNFVSHDDGKTLCIV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + G++F + +L+ +G+P +R R Y++ R+
Sbjct: 137 KATMEELGYKFNQKVLNAVNYGIPQNRERIYMVCFRN 173
>gi|335049000|ref|ZP_08542011.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
gi|333764445|gb|EGL41839.1| modification methylase HpaII [Megasphaera sp. UPII 199-6]
Length = 333
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 7 HAFSLEVVTAI--DINTSANSVYKHNFPRTNLRGRNIQSF----SIEEINAMSPDVILMS 60
AF E+ T + N + Y NF G I F +I+E N D++L
Sbjct: 20 QAFGAEMTTVFTSEWNKKSQETYLANF------GEEIHIFGDITAIDEKNIPPHDILLAG 73
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQ F+ G ++ D R T L + + I + + ENVK + ++ +I
Sbjct: 74 FPCQAFSLAGKKRGFEDTRGT-LFFDVARIVNYHKPKVVFCENVKNLVNHDRGKTFKIIN 132
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
L G++ +L+ FGVP +R R Y++A R A
Sbjct: 133 QTLQDLGYKVFHKVLNSKDFGVPQNRERIYIVAFREDIA 171
>gi|425462326|ref|ZP_18841800.1| Modification methylase HindV [Microcystis aeruginosa PCC 9808]
gi|389824640|emb|CCI26264.1| Modification methylase HindV [Microcystis aeruginosa PCC 9808]
Length = 310
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY +NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 24 IVAAFDNWIPAIDVYSNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ + T G+
Sbjct: 81 G-KRDEGLGRANLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILIQAKQIFTSHGYGLTG 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
+++ GVP +R RY+LI K + E F + +E ++ P
Sbjct: 139 KVINSCYCGVPQARKRYFLIGK-----MNEEDDFLIDEINENLSSQP 180
>gi|418075122|ref|ZP_12712365.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|418143175|ref|ZP_12779977.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|421232980|ref|ZP_15689615.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
gi|353752377|gb|EHD33006.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|353810187|gb|EHD90440.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|395592825|gb|EJG53080.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
Length = 360
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|406885095|gb|EKD32374.1| hypothetical protein ACD_77C00108G0001, partial [uncultured
bacterium]
Length = 380
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V A +I+ +VYK NF P +L+ I + + DV+ PCQPF++
Sbjct: 20 QCVFASEIDPVLQAVYKENFGLTPSGDLK-------LISPTSVPNHDVLCAGFPCQPFSK 72
Query: 69 TGLQKDIA-DARCTALSYLIETIPAI-PSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
G Q D + Y+ E I A P+ LLENV ++ LI L
Sbjct: 73 AGEQLGFGCDKQGDLFQYVAEIIAAKRPAF--FLLENVPNLLKHNNGKTYKLILEKLKNL 130
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ E LSP FGVP R R Y++ + H S
Sbjct: 131 QYDVDEHRLSPHHFGVPQIRDRVYIVGAKHGLRHFS 166
>gi|404481724|ref|ZP_11016954.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345028|gb|EJZ71382.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 346
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
++E + D++L PCQ F+ G ++ DAR T L + + I + + ENV
Sbjct: 58 KVDEKDIPPHDILLAGFPCQAFSLAGQKRGFEDARGT-LFFDVARIVKYHKPKVVFCENV 116
Query: 105 KGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
K + R+ D+I S+L G++ +L+ FGVP +R R Y++ R+ A
Sbjct: 117 KNLVNHDRGRTFDVIKSVLEDLGYKVFYKVLNSKNFGVPQNRERIYIVGFRNDIA 171
>gi|29350162|ref|NP_813665.1| cytosine-specific methyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 402
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------- 107
D+++ PPCQ F+ G +K+ D R + I+ I I + + ENVKGF
Sbjct: 84 DLVVGGPPCQGFSMAGRRKE-NDQRNNLVKSYIKFIKTIQP-KIIFFENVKGFTLEFRKN 141
Query: 108 --EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCF 165
+G + L RAG+ + L++ ++G+P RTR+ L+ R + S+
Sbjct: 142 KDKGKEYSSYVERALNRAGYYVKGELVNFGEYGIPQKRTRFILVGVRKDVPNVSK----- 196
Query: 166 ETSSELMTELPKLKANTCNPLLSRMTL 192
+T+S+ + L N + LS+ L
Sbjct: 197 DTASQFFS----LIKNNRHSFLSKKNL 219
>gi|268602423|ref|ZP_06136590.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
gi|268586554|gb|EEZ51230.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
Length = 315
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFPR L +++ + + +++ N S D+++ PPCQ
Sbjct: 7 GFQQLLSVEMESDYCQTYRTNFPRHQLLQKDLTTLTEQDLTNCLNGQSVDLVIGGPPCQG 66
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 67 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 126
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 127 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 186
Query: 180 ANTCNP 185
A NP
Sbjct: 187 AGESNP 192
>gi|428770450|ref|YP_007162240.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428684729|gb|AFZ54196.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 350
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL V + +I+ A +Y NF P ++R I N + DV+L
Sbjct: 16 RLGFEKAGFNCVFSSEIDIHAREMYLANFQEKPDGDIR-------KINHKNIPNFDVLLA 68
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG-SRSRDLITS 118
PCQPF+ G +K D R T L + I I + ++LENVK F+ + LIT
Sbjct: 69 GFPCQPFSIAGEKKGFNDIRGT-LFFEIAKIIEYHQPKVIVLENVKHFKNHDNGKTLITV 127
Query: 119 M--LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ LL+ FGVP +R R +I
Sbjct: 128 LNTLNNLGYTTSWTLLNAKDFGVPQNRERTIIIG 161
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ + +++NFP + + R++ + EI +SP DV+ PPC
Sbjct: 29 GFDVLASVEIDPIHCATHEYNFPFSTMICRSVTEITAREIRNLSPIGTQDIDVVFGGPPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G ++ + D R + + + + + + + +LENV G + + LI ++
Sbjct: 89 QGFSLIG-KRLLDDPRNDLIYHFLRLVLEL-NPKYFILENVPGMALGKHKKLIEEIIN-- 144
Query: 124 GFRFQE---------FLLSPTQFGVPNSRTRYYLIAKRS 153
+FQE +L+ +GVP +R R +L+ +
Sbjct: 145 --KFQENNYNVEENIKILNAAHYGVPQNRERLFLLGSQK 181
>gi|166237008|gb|ABY86226.1| BsaHI DNA methyltransferase [Geobacillus stearothermophilus]
Length = 323
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 12 EVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E+V A + A VYK NF P N++ ++I PD+I+ PPCQ ++
Sbjct: 23 EIVAAFENWKDAIEVYKKNFKHPVIEYDLSNVEDYNI--FKQFKPDMIIGGPPCQDYSSA 80
Query: 70 GLQKDIADARCTA-LSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
G +K+ +A T + +I + + L+ENV + + + +AG+
Sbjct: 81 GKRKEDENANLTIDFANIIANVKP----KYFLMENVDQIKKYNAYHKAVEIFRKAGYGLS 136
Query: 129 EFLLSPTQFGVPNSRTRYYL 148
+L + GVP R R++L
Sbjct: 137 AKILDASLCGVPQKRKRFFL 156
>gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
Length = 406
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 19/189 (10%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILMSPPCQ 64
A +V A+D + +A Y+HNF G ++ I ++ S DVI PPCQ
Sbjct: 123 AAGYNIVKALDFDKNAVKAYRHNF------GDYVEQADISAVDIDSLPDTDVIFGGPPCQ 176
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLT 121
F+ G + AD L + I + + ENVKG R R D
Sbjct: 177 DFSVAG-KGAGADGERGKLVWRYLEIIERKQPKAFVFENVKGLITKRHRPTFDAFIEKFN 235
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS------EASFCFETSSELMTEL 175
G+ ++S +GV R R +++ R + E + +++ +L
Sbjct: 236 EIGYEISWRVMSAWDYGVAQKRERVFIVGIRKDLGFTFEFPKPLEGDYQTRVLRDVIGDL 295
Query: 176 PKLKANTCN 184
P+ + C
Sbjct: 296 PEPERQDCG 304
>gi|421717197|ref|ZP_16156503.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407218647|gb|EKE88468.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 312
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G ++ I + D ++ P
Sbjct: 11 RLGLERYHLKCVGHAEINHEALRTYESFFKDTHNFGDLMR---INPNDLPDFDALISGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHNKKATFNIIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 127 LQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSI-EEI----NAMSPDVILMSPPCQPFTRTG 70
A+D N SA +KHN P +++ +I + SI +EI + ++I+ PPCQ F+ G
Sbjct: 3 AVDFNKSALETFKHNMPWSDIICGDITNESIRQEIIKRATKLKVNMIIGGPPCQGFSNKG 62
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRF 127
+ + D R +E + + + ++ENVK + + D I + + G+
Sbjct: 63 KKLGLNDKRNFLFKEYLEIVGKLQP-EIFIIENVKTMLTTANGYFLDQIQNTAKQLGYFV 121
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L+ FGVP +R+R +I ++
Sbjct: 122 EYGVLNAYDFGVPQTRSRTTIICHKN 147
>gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|418174730|ref|ZP_12811334.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|421235148|ref|ZP_15691761.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|353834318|gb|EHE14421.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|395599113|gb|EJG59296.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
Length = 360
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|115373224|ref|ZP_01460525.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1]
gi|115369825|gb|EAU68759.1| modification methylase NaeI [Stigmatella aurantiaca DW4/3-1]
Length = 303
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E V A++I+ A + + N P+ + +++ FS + D++ PC PF+
Sbjct: 3 GFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFSGSSFRGV--DLLAGGVPCPPFSIA 60
Query: 70 GLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRA 123
G Q D R AL + E PA ++LENV+G R R + S L R
Sbjct: 61 GKQLGADDERDLFPEALRLVEEIRPA-----AVMLENVRGLAAERFSEYRASVLSRLERL 115
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
G+ +L+ + +GVP R R+ L+A R AA
Sbjct: 116 GYVPSWRVLNASDYGVPQLRPRFILVALRPVAA 148
>gi|417847800|ref|ZP_12493761.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
gi|339456198|gb|EGP68791.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
Length = 351
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQ 64
V+ ID + A ++ N + + +I + S EE I D+I+ PPCQ
Sbjct: 24 GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDIKPIIGEQKIDIIVGGPPCQ 83
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLITSML 120
+ +G +K LSY+ P+ ++ENV G F+G + +D I
Sbjct: 84 GMSLSGPRKFDDPRNKLYLSYIRLVREIKPT--AFVIENVIGIVSLFKG-QIKDTIIEEF 140
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
++ G++ Q +L + +GVP +R R + R+ EA T+ +++LP L+
Sbjct: 141 SKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRNDGFEYPEALGTIITTEMAISDLPTLE 199
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM------SPDVILMSPPC 63
E + AIDI+ A + YKHN+P T + ++I+ + ++ V++ PPC
Sbjct: 23 GFESLCAIDIDAKALATYKHNYPNTKIIHQDIRQVNPSDLRLALGLRQEELTVLIGGPPC 82
Query: 64 QPFTRT--GLQKDIADARCTALSYLIETIPAIPSLQCLLLENV----KGFEGSRSRDLIT 117
Q F+R + + D+R +E + L ++ENV K + G R+ IT
Sbjct: 83 QGFSRNTPAGYRYLNDSRNQLYRTFLEFVEEFRPLYA-VIENVPEILKAYNGV-VREEIT 140
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK 177
L G++ L+ +G+P +R+R + +A + H E + + S+ T
Sbjct: 141 KQLESLGYKVISSSLNAAHYGIPQTRSRAFFLASLDNSLHFPEPTNFGDIRSDYRT---- 196
Query: 178 LKANTCNPL 186
+CN L
Sbjct: 197 --MKSCNQL 203
>gi|319778406|ref|YP_004129319.1| DNA (cytosine-5-)-methyltransferase, partial [Taylorella
equigenitalis MCE9]
gi|317108430|gb|ADU91176.1| DNA (cytosine-5-)-methyltransferase [Taylorella equigenitalis MCE9]
Length = 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTR 68
L+ V +I+++A Y NF L I +E+ + P D +L PC F+
Sbjct: 20 LKTVYVSEIDSNAVKTYTSNFSSNKL----IHGDVTKEVESDIPPHDFLLAGFPCHAFSA 75
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGF 125
G Q DAR T L + + I Q + ENVK + ++ +I S L G+
Sbjct: 76 AGRQMGFDDARGT-LFFEVARIINYHKPQVVFAENVKNLVNHDKGKTFKVIVSALKNLGY 134
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +L+ FGVP +R R Y++A
Sbjct: 135 QVFHQVLNSKNFGVPQNRKRIYIVA 159
>gi|420462466|ref|ZP_14961247.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393077867|gb|EJB78611.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + QC LLENVKG + ++
Sbjct: 66 DVLISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILRVKQPQCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|420409147|ref|ZP_14908300.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393022421|gb|EJB23544.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 312
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G ++ I + D ++ P
Sbjct: 11 RLGLEQYHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDALISGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 127 LQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMSPPCQPFTRT 69
V ++DI S Y HNFP NL ++I E+ + DV++ PPCQ F+
Sbjct: 29 VFSVDIEPSFCETYNHNFPSHNLIHKDICDVKDAELKYLKEYDEIDVVIGGPPCQGFSIA 88
Query: 70 G--LQKDIADARCTALSYLIETIPAI-PSLQCLLLENVK---GFEGSRSRDLITSMLTRA 123
G +K I D R + + + P+ ++ENV +R I +
Sbjct: 89 GNIGRKFIDDPRNKLFKEFVRVVKVVEPTY--FVMENVARLYNHNKGNTRKEIINDFENL 146
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA--HSSEASFCFETSSELMTELPKLKAN 181
G++ + +L+ +GVP R R I ++ + + T E ++ PKLK+
Sbjct: 147 GYKVECKILNSADYGVPQVRKRVIFIGTKNSQKILFPKKEVDKYVTVKEALSSYPKLKSG 206
Query: 182 TCNPLLSRMTLHGILDSTHPSGDLYRRYLVSD 213
+ + + + + +H L++ VSD
Sbjct: 207 QESKIPNHIAM------SHSEQMLHKMSFVSD 232
>gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
Length = 336
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ A + + + Y++N P T+L R+I I+E D I+ PPCQ ++
Sbjct: 23 GFNITFANEFDKDIWATYEYNHPNTHLDKRSITE--IKENEVPECDGIIGGPPCQSWSEG 80
Query: 70 GLQKDIADARCTALSYLIETIPA-IPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGF 125
G ++ I D R I + A PS L ENV G R + D I AG+
Sbjct: 81 GARRGIDDKRGQLFFDFIRILKAKKPSF--FLAENVSGMLAERHKSALDQIKKTFEDAGY 138
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
LL+ T +G+ R R + R
Sbjct: 139 DLHFKLLNATDYGIAQDRKRVIFLGFR 165
>gi|410864690|ref|YP_006979301.1| Modification methylase NaeI [Propionibacterium acidipropionici ATCC
4875]
gi|410821331|gb|AFV87946.1| Modification methylase NaeI [Propionibacterium acidipropionici ATCC
4875]
Length = 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V ++I+ A + + N P N+ +++ +S E D++ PC PF+ G Q
Sbjct: 28 VACVEIDPDACATLRLNRPEWNVIEKDVHHYSAHEWRGRI-DLLAGGVPCPPFSIAGKQL 86
Query: 74 DIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRF 127
D R AL + ET+P ++LENVKG ++ R+ + L G+
Sbjct: 87 GADDERDLFPQALRLVEETLP-----DAVMLENVKGLSSAKFSGYREQVIKRLADLGYET 141
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +++ ++ GVP R R+ L+ R
Sbjct: 142 EWQVINASEHGVPQLRPRFILVGLR 166
>gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505]
gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505]
Length = 364
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
+ A++++ A + Y+ FP+T + IQ + E DV++ PPCQ F+ G ++
Sbjct: 32 IAAVEMDPEAAASYRATFPKTEVYAGAIQDWLAEGTIPTGVDVVVGGPPCQGFSTLG-KR 90
Query: 74 DIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGS-RSRDLITS-----MLTRAGFR 126
D DAR + I A P + ++ENV F S + RD + + L F
Sbjct: 91 DAEDARNRLWEQYAQVIQRARP--KYFVVENVPAFGKSPQYRDFLAATGPGEFLEDYSFD 148
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
F+ +L+ +G P +R R LI R
Sbjct: 149 FR--VLNAADYGAPQARRRAVLIGHR 172
>gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
+ A++++ A + Y+ FP+T + IQ + E DV++ PPCQ F+ G ++
Sbjct: 32 IAAVEMDPEAAASYRATFPKTEVYAGAIQDWLAEGKIPTGVDVVVGGPPCQGFSTLG-KR 90
Query: 74 DIADARCTALSYLIETIP-AIPSLQCLLLENVKGFEGS-RSRDLITS-----MLTRAGFR 126
D DAR + I A P + ++ENV F S + RD + + L F
Sbjct: 91 DAEDARNRLWEQYAQVIQRARP--KYFVVENVPAFGKSPQYRDFLAATGPGEFLEDYSFD 148
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
F+ +L+ +G P +R R LI R
Sbjct: 149 FR--VLNAADYGAPQARRRAVLIGHR 172
>gi|67595546|ref|XP_666006.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis
TU502]
gi|54656899|gb|EAL35775.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium hominis]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 97 QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
+ +ENV FE S + + ML++ F EF+LSPT GVPN+R RYY ++ R +A
Sbjct: 12 KAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRKDSA 71
Query: 157 H 157
+
Sbjct: 72 N 72
>gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase
[Streptococcus agalactiae 2603V/R]
gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Streptococcus agalactiae 2603V/R]
Length = 437
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 10/194 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL E + +IN A + YK H+ + +I S E I + S DVI
Sbjct: 14 RLGMEQAGHECIGFCEINKFARASYKVIHD-TEGEIELHDITRVSDEFIRGIGSVDVICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG EG + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHEGGATFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
L G+ + + + FGVP +R R ++I + F FE+S +
Sbjct: 132 IRTLDELGYNVEWQIFNSKNFGVPQNRERVFIIGHLR--GEGTRPIFPFESSITENYPIH 189
Query: 177 KLKANTCNPLLSRM 190
K NP + M
Sbjct: 190 TRKIGNVNPSGNGM 203
>gi|425434431|ref|ZP_18814900.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676083|emb|CCH94847.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYHANF------GDEPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ ++I L G+
Sbjct: 91 CGNLKGFEDTRGT-LFFEIARILKAKQPASFILENVKQLQGHQQGKTLEVILDTLQDLGY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|428297014|ref|YP_007135320.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428233558|gb|AFY99347.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 437
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------SPDVILM 59
E+ AID N A + Y+ NF + ++I+ + +EI A DV+
Sbjct: 18 GFEIGIAIDNNPIALATYQQNFSNATILCKDIREVTGKEIRAHIQAKYPDWDGEIDVVFG 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM 119
PPCQ F+ G Q++I D R + + + + L ++ENV G E + + ++
Sbjct: 78 GPPCQGFSVAG-QQNIEDERNGLVREFVRLVLELNPLAA-IMENVPGIENQKFGCITANL 135
Query: 120 --LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ + ++ L+ + +GVP +R R + +A +
Sbjct: 136 QAVLEEHYFLSKWNLNASNYGVPQARKRVFFVASK 170
>gi|195867543|ref|ZP_03079546.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195867960|ref|ZP_03079957.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660356|gb|EDX53616.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|195660787|gb|EDX54041.1| type II restriction-modification system methylation subunit
[Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 323
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y+ N+ ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYEENYKPKSVLGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T+ S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTSSSLLFETIRIIKEMKDKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|410609536|ref|YP_006953590.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|417126105|ref|ZP_11973900.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|420091914|ref|ZP_14603644.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|420119027|ref|ZP_14628334.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|424747487|ref|ZP_18175667.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
gi|425376183|ref|ZP_18760775.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|355469723|gb|AER93372.1| type II DNA methyltransferase M.EcoO34I [Escherichia coli]
gi|386145375|gb|EIG91834.1| putative modification methylase HaeIII [Escherichia coli 97.0246]
gi|394381647|gb|EJE59324.1| putative site-specific DNA-methyltransferase [Escherichia coli
O111:H8 str. CVM9602]
gi|394432251|gb|EJF04359.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CVM10030]
gi|408313887|gb|EKJ30394.1| cytosine-specific methyltransferase [Escherichia coli EC1865]
gi|421946117|gb|EKU03269.1| putative site-specific DNA-methyltransferase [Escherichia coli
O26:H11 str. CFSAN001629]
Length = 385
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+VV A D A Y+ NF P L N+ + E+ + D+I+ PPCQ F+
Sbjct: 21 GFDVVGAYDFWDPAIECYRDNFSHPIKKLDLSNVDDV-VRELKDIDFDMIIGGPPCQDFS 79
Query: 68 RTGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
GL+ + A A T + S +I+ I + ++ENV S + + +G+
Sbjct: 80 HAGLRIEGARANLTRSFSEIIKRIKP----KWFVMENVDRALRSGAYLEARGIFKESGYG 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAK 151
E +L ++ GVP R R ++I K
Sbjct: 136 LTEIVLDASKCGVPQKRKRLFVIGK 160
>gi|304373674|ref|YP_003858419.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
gi|299829630|gb|ADJ55423.1| putative DNA-methyltransferase, type II restriction-modification
system [Enterobacteria phage RB16]
Length = 302
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 6 NHAFS-LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
++AF +E + +I+ A Y N+ NL+G F+I+E D++L PCQ
Sbjct: 18 DNAFGGVECLLTSEIDKHAQQTYIENWGDDNLQG---DLFAIDENKVPDHDILLAGFPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F++ GL+ DAR T ++ I A + L ENV + ++ I +L
Sbjct: 75 AFSKAGLKLGFDDARGTVFFEILRIIRA-KKPRVLFFENVPELLTHDKGKTFKTIYGLLE 133
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLI 149
G+ L+ FG+P R R +++
Sbjct: 134 AEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|434396656|ref|YP_007130660.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428267753|gb|AFZ33694.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 724
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ + V + +I+++ VY +NF +I IE+I DV+ P
Sbjct: 19 RLAFEQAGYKCVYSCEIDSACQEVYFNNFGEK--PKDDITKIDIEKIPDF--DVLTAGFP 74
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGF---EGSRSRDLITS 118
CQPF+ G ++ D R T ++ + I A PS+ +LLENVK + R+ D+I
Sbjct: 75 CQPFSICGKRQGFEDTRGTLFFHICKIIEAKQPSV--VLLENVKHLVHHDRGRTLDIILY 132
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ +L+ FG+P +R R + A ++
Sbjct: 133 SLEDLGYLVDYKILNSKDFGLPQNRERIIIFATKN 167
>gi|390955024|ref|YP_006418782.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390421010|gb|AFL81767.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 326
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+ V + DI+ A Y+ NF I E + D++ PCQPF+ G
Sbjct: 34 DCVFSSDIDKYAQESYEANFGEKPFGDIT----KINEKDIPDHDILFGGFPCQPFSIIGQ 89
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQ 128
K + D R T L + I I + +LENVK G + ++ +I L G+ Q
Sbjct: 90 MKGLNDTRGT-LFFDIARIIEAKRPKAFILENVKQLVGHDQGKTLKVIVQSLKDLGYHVQ 148
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSP 154
+L+ +G+P R R ++ R P
Sbjct: 149 YSVLNALDYGLPQKRERVVIVGHREP 174
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DVI+ PPCQ F++ G +K I D R Y ++ + + + ++ENV E
Sbjct: 31 DVIIGGPPCQGFSQKGQRKTIYDKRNFLFEYYVKVVELVKP-KYFVMENVPNLLTAEKGY 89
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ I ++ G+ Q +L+ FGVP +R R +I K + A S +S
Sbjct: 90 FFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGKMNGVAPSLPSSL 141
>gi|420489566|ref|ZP_14988158.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523507|ref|ZP_15021925.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
gi|393104987|gb|EJC05538.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125856|gb|EJC26308.1| modification methylase HpaII [Helicobacter pylori Hp P-11b]
Length = 317
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E++ A D + A YK N + + G IE+ + D+++ PCQPF+
Sbjct: 21 GFEIIWANDFDKHAVETYKANIGQNIVLG----DIEIEKDHIFEHDILIGGFPCQPFSTL 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G + D R T + E I + ++LENVK S I L ++
Sbjct: 77 GSLQGFEDKRGTLFFTICEIIKK-HRPKIVVLENVKNLINHNKGESFKRILFELNELDYQ 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMT 173
+L+ FG+P R R +++A R + + E F +TS ++ T
Sbjct: 136 VNYDILNTLDFGIPQQRNRVFIVALRKNSFTNLEFIFPSKTSCKIST 182
>gi|310817513|ref|YP_003949871.1| cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309390585|gb|ADO68044.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 332
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E V A++I+ A + + N P+ + +++ FS + D++ PC PF+
Sbjct: 32 GFEHVAAVEIDKHACATLRLNRPQWRVFEEDLKDFSGSSFRGV--DLLAGGVPCPPFSIA 89
Query: 70 GLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRA 123
G Q D R AL + E PA ++LENV+G R R + S L R
Sbjct: 90 GKQLGADDERDLFPEALRLVEEIRPA-----AVMLENVRGLAAERFSEYRASVLSRLERL 144
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
G+ +L+ + +GVP R R+ L+A R AA
Sbjct: 145 GYVPSWRVLNASDYGVPQLRPRFILVALRPVAA 177
>gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
Length = 402
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------- 107
D+++ PPCQ F+ G +K+ D R + I+ I I + + ENVKGF
Sbjct: 84 DLVVGGPPCQGFSMAGRRKE-NDQRNNLVKSYIKFIKTIQP-KIIFFENVKGFTLEFKKN 141
Query: 108 --EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSE 160
+G + L RAG+ + L++ ++G+P RTR+ L+ R + S+
Sbjct: 142 KDKGKEYSSYVERALNRAGYYVKGELVNFGEYGIPQKRTRFILVGVRKDVPNVSK 196
>gi|409993125|ref|ZP_11276279.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|79835469|gb|ABB52095.1| Mod [Arthrospira platensis]
gi|291565921|dbj|BAI88193.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409935999|gb|EKN77509.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 314
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
N F ++ A +I A VY+ NF + + I + P+VI+ PPC
Sbjct: 17 FQNAGFDMK--AAFEIWKPAIKVYQRNFSHPIFQVDLSKESVINTLGEWKPEVIIGGPPC 74
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G ++D + R I +I Q ++ENV +++ + +L +
Sbjct: 75 QDFSSAG-KRDESLGRANLTINFAGIIASIKP-QFFVMENVSRITKTQTLKVTWQILKNS 132
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMT 173
G+ +L + GVP +R RY+LI + ++ E +S+ MT
Sbjct: 133 GYGLTASVLDASYCGVPQARKRYFLIGELEGKDNALEPYLFKNYASKPMT 182
>gi|423232099|ref|ZP_17218501.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
gi|392625163|gb|EIY19234.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T00C15]
Length = 248
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILM 59
L+ E V A +I S+Y+ NF S I EI+ D++
Sbjct: 18 LALEKLGCECVFASEIQPELQSLYERNFGMKC-------SGDINEIDITKDIPDHDILCA 70
Query: 60 SPPCQPFTRTGLQKDIAD-ARCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDL 115
PCQPF++ G Q+ D R L Y I I + + LENV K + + +
Sbjct: 71 GFPCQPFSQAGKQQGFDDQKRRGNLFYKIWEILECKKPEFVFLENVPNLKSHDNKNTYKV 130
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
I S L++ + Q+ ++SP FG+P RTR Y++ +
Sbjct: 131 IYSTLSQL-YDIQDDIISPHYFGIPQHRTRIYIVGR 165
>gi|371496135|ref|YP_004957283.1| unnamed protein product [Planktothrix phage PaV-LD]
gi|325587502|gb|ADZ31517.1| site-specific DNA methylase [Planktothrix phage PaV-LD]
Length = 346
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGR---NIQSFSIEEINAMSPDVILMSPPC 63
A + V ++ + V + NFP T + I++ +E + D++ MSPPC
Sbjct: 19 EAAGFKSVWGVERDPKIAEVARLNFPNTQVFNSCVGEIRTHLMERV-----DLLWMSPPC 73
Query: 64 QPFTRTGLQKDIADAR-CTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
Q ++ + DI D + A Y + I AI S + ++LENV G+ S + + I L
Sbjct: 74 QQYS-NARRGDIPDHKDKDAGLYCCDYI-AILSPRWVVLENVPGYAKSPTFEAILRSLID 131
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS--PAAHSSEA---SFCFETSSELMTEL 175
G+R+ +L +GVP +R R + A ++ P + E+ ++ S+L+ E+
Sbjct: 132 CGYRYHWLILDAADYGVPQNRKRLIMWAVKNSEPLPYFPESKPRKGWYQAISDLIPEM 189
>gi|416406066|ref|ZP_11688038.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
gi|357261153|gb|EHJ10455.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
Length = 420
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTGLQ 72
+ + +I+ A Y NF I I+ I+ +S + IL PCQPF+ G
Sbjct: 32 ILSSEIDYKACETYALNFDE-------IPQGDIKNIDKISSFNFILAGFPCQPFSYAGKH 84
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE 129
+ D R T L + +E I LLENV+G + R+ I + L + +
Sbjct: 85 QGFGDTRGT-LFFEVERILDKYKPDGFLLENVRGLVTHDKGRTLKTIINKLNDLDYSVEY 143
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRS 153
LL+ + F VP +R R Y++ K+
Sbjct: 144 LLLNSSNFNVPQNRVRIYIVGKKG 167
>gi|119510471|ref|ZP_01629604.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
gi|119464893|gb|EAW45797.1| DNA cytosine methylase [Nodularia spumigena CCY9414]
Length = 727
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ E V + +I+ + VY +NF P ++R +++ DV+
Sbjct: 19 RLAFEKADYECVFSCEIDQACQQVYLNNFGDKPECDIRKIDLEKLP-------YFDVLTA 71
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGF---EGSRSRDL 115
PCQPF+ G +K D R T ++ E I I P + ++LENVK + R+ D+
Sbjct: 72 GFPCQPFSICGHRKGFHDTRGTLFFHICEIIEHIHPPV--VVLENVKHILHHDQGRTLDV 129
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
I L G+ +++ FG+P +R R +A +
Sbjct: 130 ILYSLEDMGYIVNYEIVNSRDFGLPQNRERVVFVATKD 167
>gi|428777731|ref|YP_007169518.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428692010|gb|AFZ45304.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 468
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + I +++IN + D+I+ PCQP++ G
Sbjct: 54 EIDREAREVYQKNFINY-VNANEIDLGDVKQINYLPWHIDLIVGGVPCQPWSIAGKSGGF 112
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRFQEFLL 132
D R L + + I + Q + ENVKG R S I LT +G++ Q +L
Sbjct: 113 DDPR-GRLWFDVIRIVELNQPQGFIFENVKGLTDPRHQKSFSYILESLTNSGYQVQWKVL 171
Query: 133 SPTQFGVPNSRTRYYLIAKR 152
+ FG+P R R +++ +
Sbjct: 172 NSYDFGLPQDRQRVFIVGNK 191
>gi|254779672|ref|YP_003057778.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001584|emb|CAX29633.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I N D ++ P
Sbjct: 17 RLGLERCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNNLPDFDALVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ +I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKIIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 133 LQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|254410261|ref|ZP_05024041.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183297|gb|EDX78281.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 384
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
R++ + V + +I+ VY +NF P ++R +I S DV+
Sbjct: 17 RIAFEQTGYKCVYSCEIDPKCQEVYFNNFLDKPAGDIREIDINSIP-------DFDVLTA 69
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G +K D R T + E I A +LLENVK + R+ +I
Sbjct: 70 GFPCQPFSICGKRKGFQDTRGTLFFRICEIIAA-KKPPVILLENVKHLMHQDKGRTLKVI 128
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ LL+ FGVP +R R ++A ++
Sbjct: 129 LYSLEDLGYNVNYSLLNSKDFGVPQNRERIIIVATKN 165
>gi|332881189|ref|ZP_08448845.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332680863|gb|EGJ53804.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 367
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+++ F+ + ID + AN YK+NFP G +I+ N D+I PC
Sbjct: 20 ASYQFTEHYFSEIDKHAIAN--YKYNFPNAKHIG---DITTIQPANLAGADIITFGSPCV 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKG-FEGSRSRD---LITSM 119
F+ G + +A + + + Y I I + PS+ + ENVKG F + D +I +
Sbjct: 75 DFSVAGRRAGLAGTKSSLIQYAIALITCVRPSV--FIWENVKGTFSSNAGADFWAIIQAF 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLI---AKRS-PAAHSSEASFCF---ETSSELM 172
G+R + LL+ T + +P +R R YL+ A RS P C +T S+
Sbjct: 133 ANIGGYRLEWQLLN-TSWVLPQNRERIYLVGHLAGRSEPGVFPIREDDCLPTTKTQSQFQ 191
Query: 173 TELPK-LKAN 181
+L LKAN
Sbjct: 192 AQLSGTLKAN 201
>gi|109947180|ref|YP_664408.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str.
Sheeba]
gi|109714401|emb|CAJ99409.1| C-5 cytosine-specific DNA methylase [Helicobacter acinonychis str.
Sheeba]
Length = 315
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR- 113
DV++ PCQ F+ G +K + D R T + L+ I + +C LLENVKG R +
Sbjct: 60 DVLISGFPCQAFSINGKRKGLDDERGTIIYGLVH-ILKVKQPKCFLLENVKGLINHRQQE 118
Query: 114 --DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
++I L G+ +L+ F + R R Y++ R H
Sbjct: 119 TFEIIIKALQEVGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKHQ 165
>gi|420500673|ref|ZP_14999218.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393151055|gb|EJC51359.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 318
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G ++ I + D ++ P
Sbjct: 17 RLGLERYHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDALISGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ +I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKIIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 133 LQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ + ++ NFP ++ +++ + EI S DV++ PC
Sbjct: 29 GFDVLASVEIDPIHCATHEFNFPLCSILCKDVTQLTGSEIRKKSAIGRREIDVVISGSPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT-- 121
Q F+ G ++D+ D R + + + + + + ++ENV G ++L+ +++
Sbjct: 89 QGFSMMG-KRDVDDPRNSLIFHFQRLVLELKP-KFFVMENVPGIASGEHKELLNILISSF 146
Query: 122 -RAGFRFQE--FLLSPTQFGVPNSRTRYYLIA 150
AG++ +E +L+ +GVP +R R +LI
Sbjct: 147 MEAGYKVEENYQVLNAVHYGVPQARKRLFLIG 178
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD---VILMSPPCQPFTR 68
EV +A++I++ A Y+ N NL +I D +++ PPCQ F+
Sbjct: 25 EVTSALEIDSWAAETYQFNHRNVNLLTEDITKVDSTYFKVNFKDRVNLVVGGPPCQGFSV 84
Query: 69 TG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF-----EGS-RSRDLITSMLT 121
+G Q + ++ I I A+ + +LENV+GF EG ++ + + + L
Sbjct: 85 SGPRQYGVYKKENALVAEYIRVIKAVEP-EYFILENVRGFTTATIEGRIKALNFLLAELR 143
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
G+ +L +GVP R+R +++ R P A+
Sbjct: 144 EIGYHVYHDVLQAADYGVPQLRSRLFVVGSRHPIAN 179
>gi|14601777|ref|NP_148318.1| cytosine-specific DNA methylase [Aeropyrum pernix K1]
gi|5105700|dbj|BAA81012.1| cytosine-specific DNA methylase [Aeropyrum pernix K1]
Length = 327
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI---NAMSP---DVILMSPPC 63
V AID A YK NFP T +++ +EEI + +SP DV++ SPPC
Sbjct: 25 GFRVRVAIDNYPPAARTYKANFPHTAFIADDVKEVGLEEISSVSGLSPGEVDVVIASPPC 84
Query: 64 QPFTRTG-------LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLI 116
+PFT L + D + I I + + ++ENV G +
Sbjct: 85 EPFTGANPRRMERPLDRLYRDPAGQLFLHAIRLI-GLLKPRFFVIENVPGIAHPEIERAV 143
Query: 117 TSMLTRAGFRFQEF-LLSPTQFGVPNSRTRYYL 148
L++AG+R F LL + G P+ R R ++
Sbjct: 144 RMELSKAGYRRVYFNLLRAEEHGTPSRRLRVFV 176
>gi|421654595|ref|ZP_16094922.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510366|gb|EKK12028.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 309
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
EVV A D + A Y HN + G NI S + I DV++ PCQ F++
Sbjct: 21 GFEVVWANDFDEDACKTYAHNIGEHIVHG-NISSIFSDTIPEC--DVVIGGFPCQGFSQA 77
Query: 70 GLQKDIADARCTA-LSYLIETIPAIPSLQCLLLENVKG---FEGSRSRDLITSMLTRAGF 125
L++ D R L +L P + + ENV+G +G + I AG+
Sbjct: 78 NLKRSNDDDRNQLYLEFLRIVTDKKP--KYFVAENVRGILSLDGGNAIKKIIDDFKNAGY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
R Q L + +GVP +R R +I R+ H
Sbjct: 136 RIQYQLFNTADYGVPQTRYRVIIIGIRNDLNH 167
>gi|419264366|ref|ZP_13806760.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
gi|378120434|gb|EHW81908.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC10C]
Length = 297
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+VV A D A Y+ NF P L N+ + E+ + D+I+ PPCQ F+
Sbjct: 21 GFDVVGAYDFWDPAIECYRDNFSHPIKKLDLSNVDDV-VRELKDIDFDMIIGGPPCQDFS 79
Query: 68 RTGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
GL+ + A A T + S +I+ I + ++ENV S + + +G+
Sbjct: 80 HAGLRIEGARANLTRSFSEIIKRIKP----KWFVMENVDRALRSGAYLEARGIFKESGYG 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAK 151
E +L ++ GVP R R ++I K
Sbjct: 136 LTEIVLDASKCGVPQKRKRLFVIGK 160
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + V +D +A + HNF + ++ + ++ + + ++++ PPCQ
Sbjct: 23 NFKTVIGLDFEKAAIDTFNHNFKQAIGICGDITNKEVKDKVVNLAKELKVNMVIGGPPCQ 82
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS---RDLITSMLT 121
F+ G +AD R +E + + + + ++ENVK + + R+ I +
Sbjct: 83 GFSLKGKNLGLADERNFLFLEYLELVEKV-NPEIFIIENVKNLYNAVNGYFREEIIKKIK 141
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA 180
G+ +L+ +GVP +R R + IA + + S C + + +++L L++
Sbjct: 142 NMGYVVNCKILNAKHYGVPQNRERVFFIAHKERLLSFPKESNCLVSVKDAISDLNYLES 200
>gi|423246650|ref|ZP_17227703.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
gi|392635002|gb|EIY28909.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei CL02T12C06]
Length = 248
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILM 59
L+ E V A +I S+Y+ NF S I EI+ D++
Sbjct: 18 LALEKLGCECVFASEIQPELQSLYERNFGMKC-------SGDINEIDITKDIPDHDILCA 70
Query: 60 SPPCQPFTRTGLQKDIADA-RCTALSYLIETIPAIPSLQCLLLENV---KGFEGSRSRDL 115
PCQPF++ G Q+ D R L Y I I + + LENV K + + +
Sbjct: 71 GFPCQPFSQAGKQQGFDDQKRRGNLFYKIWEILECKKPEFVFLENVPNLKSHDNKNTYKV 130
Query: 116 ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
I S L++ + Q+ ++SP FG+P RTR Y++ +
Sbjct: 131 IYSTLSQL-YDIQDDIISPHYFGIPQHRTRIYIVGR 165
>gi|77465763|ref|YP_355266.1| cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
gi|77390181|gb|ABA81365.1| Cytosine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
Length = 443
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V A++I+ +V+K NFP T + R++ + EEI + D + PPC
Sbjct: 23 GFDVAAAVEIDPVHCAVHKFNFPDTAVIPRSVVGLTAEEIRESAGIGNRPIDCVFGGPPC 82
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRA 123
Q F+ G + + D R + + + + + + + ENVKG R ++ ++
Sbjct: 83 QGFSLIG-HRALEDPRNSLVLEFVRLVREL-DARTFVFENVKGLTVGSHRTFLSELVAAF 140
Query: 124 GF-----RFQEFLLSPTQFGVPNSRTRYYLI-AKRS 153
G R +L +G P R R +LI AKR
Sbjct: 141 GMAGYDVRLPWKVLDAADYGTPQHRQRLFLIGAKRG 176
>gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093]
gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093]
Length = 319
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMS-PDVILM 59
RL + E V +I+ A + YK HN + +I + +EI + D I
Sbjct: 14 RLGMESAGHECVGFCEIDKFARASYKAIHN-TEGEIELHDITQVTDDEIREIGHVDAICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I AI + L LENVKG + + ++I
Sbjct: 73 GFPCQAFSIAGHRRGFEDTRGT-LFFEIARFAAILKPKYLFLENVKGLLNHDKGNTFEVI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 LSALDELGYDVEWQVLNSKDFGVPQNRERLFIIG 165
>gi|427723401|ref|YP_007070678.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355121|gb|AFY37844.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 401
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS-----PDVILMSPPCQPF 66
+++ ID N A + + NFP+ L+ ++E++ +++ D+++ PPCQ F
Sbjct: 31 KILGGIDHNPHAVTTHHQNFPKCKLKLEATDIRTLEDLPSLNLQPREVDILIGGPPCQVF 90
Query: 67 TRTGLQKDIADARCTA----LSYLI-ETIPAIPSLQ--CLLLENVKGFEGSRSRDLITSM 119
+R GL K D + ++L E + + Q ++ENV + ++L++++
Sbjct: 91 SRVGLGKMKHDLKWDIEKDHRNFLYKEYVRFVDYYQPFFFVMENVDNL--ANKKELLSTI 148
Query: 120 LTR---AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSEL 171
L G++ + +L ++FGVP R R +LI RS P F + +
Sbjct: 149 LDELAACGYKVEYEVLDSSKFGVPQRRRRIFLIGVRSDLLWEPIFPKPSGQKAF-SVGDA 207
Query: 172 MTELPKLK 179
+++LP+LK
Sbjct: 208 ISDLPELK 215
>gi|34014717|dbj|BAC81824.1| methylase [Acidocella facilis]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+VV A++++ V+K NFP+T + R++ + EI + D + PPC
Sbjct: 23 GFDVVAAVEVDPVHCGVHKFNFPQTAVVPRSVVGLTAAEIRLAAGIGNRPVDCVFGGPPC 82
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML--- 120
Q F+ G + + D R + + + + + + + ENVKG + R + ++
Sbjct: 83 QGFSMIG-HRVLDDPRNELVLEFVRLVAELDA-KTFVFENVKGLTVGKQRAFLDELVLAF 140
Query: 121 TRAGF--RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
R G+ R +L + FG P R R L +
Sbjct: 141 DRVGYAVRLAWRVLDASNFGTPQKRQRLILFGAK 174
>gi|406963796|gb|EKD89769.1| Modification methylase HgiDII [uncultured bacterium]
Length = 380
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPD--VILMSPPC 63
++ A+DIN A+ +K NFP+ + +I + S EE+ NA S + VI+ PPC
Sbjct: 25 GFDIKVAVDINKLASQSFKLNFPKAKVFSSDISTISSEELLKAANASSGNEVVIIACPPC 84
Query: 64 QPFTRTGLQKD-IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
Q F+ + + I D R T + + + I ++ENV G + L +L +
Sbjct: 85 QGFSTARRKSEAINDPRNTLIYEFLRVVRDIRPF-AFVMENVPGLANGIGKPLFQDILKK 143
Query: 123 ---AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ ++ +GVP R R LI
Sbjct: 144 LKELGYDTVYGVVDTADYGVPQRRKRLVLIG 174
>gi|420417787|ref|ZP_14916882.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030968|gb|EJB32041.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 317
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E+V A D + A YK N + + G IE+ + D+++ PCQPF+
Sbjct: 21 GFEIVWANDFDKHAVETYKANMGQNIILG----DIEIEKDHICGHDILIGGFPCQPFSTL 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM---LTRAGFR 126
G + D R T + E I + ++LENVK R+ + L ++
Sbjct: 77 GSLQGFEDKRGTLFFTICEIIKK-HRPKIVVLENVKNLINHNKRESFKRILFELNELDYQ 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF-----CFETSSELMTELPKLK 179
+L+ FG+P R R +++A R + + E F C ++ +L+ + +LK
Sbjct: 136 VNYDILNTLDFGIPQQRNRVFIVALRKNSFTNLEFVFPAKIPCKISALDLLDKQVELK 193
>gi|384888022|ref|YP_005762533.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839852|gb|ACX99617.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 319
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+I L AG+ +L+ F + +R R Y++ R H
Sbjct: 125 TFNIIIKALQEAGYTAYYQILNSADFQLAQNRERLYIVGFRKDLKH 170
>gi|304390603|ref|ZP_07372556.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326359|gb|EFL93604.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 309
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
+VV A + A VY+ NF P N+ S+E I PD+++ PPCQ F+
Sbjct: 27 GFDVVAAYENWAPALRVYRANFDHPAVEQDLSNVAE-SVESITQFEPDLVIGGPPCQDFS 85
Query: 68 RTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
G Q D R E I I PS ++ENV + S + +AGF
Sbjct: 86 TAGHQ-DETRGRAILSVKFSEIIADIRPSY--FVMENVATIRNTESFRAALANFKKAGFG 142
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +L GVP SR R +++ +
Sbjct: 143 LTQTILDAAYCGVPQSRKRMFVVGGQ 168
>gi|418028739|ref|ZP_12667291.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691422|gb|EHE91350.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 498
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 39/182 (21%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-------SPDVILMSPPCQP 65
V+ A DI +A Y N P + G I IE I++ D++ PPCQ
Sbjct: 143 VIFANDIEKAALQTYSFNHPE--IPGAQITMGGIENISSHIKDYVNEEVDMVAGGPPCQG 200
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F+ Q+ I D R Y +E++ A+ + ++ENVKG ML AG
Sbjct: 201 FSEANRQRLIDDPRNKLYKYYVESVTALQP-KVFVMENVKG------------MLKVAGQ 247
Query: 126 RFQEF------------LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMT 173
++F +L+ FGVP +R R I R A + S + E+M
Sbjct: 248 VLEDFNNSASHYDIYYKILNARNFGVPQNRERLIYIGIRKDIADRYKTS-----AEEVMN 302
Query: 174 EL 175
++
Sbjct: 303 QI 304
>gi|119488852|ref|ZP_01621814.1| NgoIM [Lyngbya sp. PCC 8106]
gi|119455013|gb|EAW36155.1| NgoIM [Lyngbya sp. PCC 8106]
Length = 385
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL ++E V A D + + VY+ NF + ++ +I + +I D + P
Sbjct: 14 RLGMKGANIETVWANDSSELSCRVYESNFGQNSIVLADITQIDLSDIP--HHDFLTAGFP 71
Query: 63 CQPFTRTGLQKDIAD-ARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLIT 117
CQPF+ G ++ I D R T ++E I Q LLENVK +G R ++
Sbjct: 72 CQPFSPAGKKQGIRDQVRGTLFERIVEIIKD-KQPQYFLLENVKRILTMEQGYHFRVILN 130
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ T + + L++P FG+P +R R +++ +S
Sbjct: 131 ALAT-LDYLIEWRLINPLHFGIPQNRDRVFILGTKS 165
>gi|418076780|ref|ZP_12714013.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|353746920|gb|EHD27578.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
Length = 366
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 12 EVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTR 68
E + +I+ A YK HN + + +I + S E I + S D+I PCQ F+
Sbjct: 7 ECIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICGGFPCQAFSI 65
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGF 125
G ++ D R T L + I +I + L LENVKG E + + I S L G+
Sbjct: 66 AGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETIISTLDELGY 124
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +L+ FGVP +R R ++I
Sbjct: 125 NVEWQVLNSKNFGVPQNRERVFIIG 149
>gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
Length = 352
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E V A++ +T+A + Y+ F + +IQ + +E D+I+ PPCQ F+ G
Sbjct: 23 ETVRAVEWDTAAAASYEATFGPDIVYSGSIQDW-LESEKVPRADLIVGGPPCQGFSTLGK 81
Query: 72 QKDIADARCTALSYLIETI-PAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAG----FR 126
Q D D R + + TI A P + ++ENV F S D + + G +
Sbjct: 82 Q-DAEDERNSLWEQYVRTILRAKP--KYFVVENVAAFAKSSQYDQFLAETSEGGALEKYT 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
FQ +L+ +G P +R R +I
Sbjct: 139 FQHRVLNAADYGAPQARKRAVIIG 162
>gi|26554428|ref|NP_758362.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
gi|26454438|dbj|BAC44766.1| cytosine-specific DNA methylase [Mycoplasma penetrans HF-2]
Length = 426
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 21/235 (8%)
Query: 2 ERLSN-HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
ER++ + F++E V +I+ A Y NF + NI+ D +
Sbjct: 21 ERVAKKNNFNIECVFVSEIDNEAIKTYSSNFSVDKEKIINIRDLDESASQVPDHDFLFAG 80
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQ F+ G +K D L + I I + +LLENVK + ++ ++I
Sbjct: 81 FPCQTFSNAGKKKGFLDEIRGTLFFDIAKILKNKKPKYILLENVKHLVNHDNGKTWEIII 140
Query: 118 SMLTRAGFRF--QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
L G+ + +LSP +FG+P R R ++ P + E + + E
Sbjct: 141 KTLKEIGYLIPKEPLILSPHEFGIPQERYRVFI-----PGVLRESVNINEEYINLDLQEY 195
Query: 176 PKLK-ANTCNPLLSRMTLHGILDSTHPSGDLYRRYLV---SDKD--LLRRFHVFD 224
K+ + NP+ ++ + + S + ++Y + +DKD LLR F +D
Sbjct: 196 KKIGYIDYSNPIETKNKIK----NDFLSQSVNKKYFLDKKNDKDAYLLRVFDAWD 246
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQ 64
V+ ID + A ++ N + + +I + S EE I D+I+ PPCQ
Sbjct: 24 GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDIKPIIGEQKIDIIVGGPPCQ 83
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLITSML 120
+ +G +K LSY+ P+ ++ENV G F+G + +D I
Sbjct: 84 GMSLSGPRKFDDPRNKLYLSYIRLVREIQPT--AFVIENVIGIVSLFKG-QIKDTIIEEF 140
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
++ G++ Q +L + +GVP +R R + R+ EA T+ +++LP L+
Sbjct: 141 SKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRNDEFEYPEALGTIITTEMAISDLPTLE 199
>gi|217032692|ref|ZP_03438178.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128]
gi|216945622|gb|EEC24273.1| hypothetical protein HPB128_202g26 [Helicobacter pylori B128]
Length = 211
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I + D+++ P
Sbjct: 11 RLGLEQCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDMLVSGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDL---ITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ T F + R R Y++ R H
Sbjct: 127 LQEAGYTTYYQILNSTDFQLAQKRERLYIVGFRKDLKH 164
>gi|448451310|ref|ZP_21592793.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
gi|445810744|gb|EMA60760.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
Length = 400
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 30/210 (14%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI---------NAMSPDVILMS 60
+V D A Y+ NFP T +++ I + DV++
Sbjct: 50 GFDVALGSDQWEPAAETYRRNFPDTEFVEEDVRELDAPAIREAVAGAGYDPDGVDVVIGG 109
Query: 61 PPCQPFTRTG-----LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS--- 112
PPCQ F+R L + D R T + + ++ Q +L+ENV+ ++
Sbjct: 110 PPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVV-SVLEPQLVLMENVRDLINRQTSDD 168
Query: 113 ---RDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK------RSPAAHSSEASF 163
+DLI G++ + +L Q+GVP R R + + R P + E S+
Sbjct: 169 RYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTDRDVPIRFPEPTTPEGSW 228
Query: 164 --CFETSSELMTELPKLK-ANTCNPLLSRM 190
E ++ +LP + ANT L R+
Sbjct: 229 RTAGEALADASDDLPNMTYANTGEKTLERI 258
>gi|363580906|ref|ZP_09313716.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT--- 67
EVV A+D + A +Y NF + R+++ IE++ D++L PCQ F+
Sbjct: 42 FEVVYAVDNDPYATKIYNSNF-KNQCETRDVRDLEIEKLPEH--DILLGGFPCQSFSISA 98
Query: 68 ----RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSML 120
R G + D ++ L E P + + ENVKG + + +I
Sbjct: 99 QNPPRLGYKDDRGKLFFEMVNVLKEKQP-----RFFIAENVKGLLSANKKKAFPMIVKEF 153
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL------MTE 174
+AG+ + L + +++G+P R R +++ ++ + A F F + L + E
Sbjct: 154 EKAGYYVKHQLFNASEYGIPQKRERVFIVGFKN---YEDFAYFQFPKPTTLNGSKVKLKE 210
Query: 175 LPKLKANTCNP-LLSRMTLHGIL 196
+ LKAN S + G++
Sbjct: 211 VIDLKANKEEKWFFSERAVQGMM 233
>gi|291530358|emb|CBK95943.1| DNA-methyltransferase (dcm) [Eubacterium siraeum 70/3]
Length = 696
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNF-PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
S+ V + + A YK NF + ++ G Q I+E + D+ L PCQ F+
Sbjct: 27 SINTVFVSEWDKYAQETYKANFRDKFDIAGDITQ---IDERDIPDFDICLAGFPCQAFSL 83
Query: 69 TGLQKDIAD---ARCTALSYL-IETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
G +K D +C +L + I + + ENVKG + R+ +I
Sbjct: 84 AGQRKGFEDDYKGKCRGTLFLDVARICEYHKPKVIFCENVKGLVIHDKGRTFKIICKTFE 143
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
G+R +L+ FGVP +R R Y++A R+ A
Sbjct: 144 DLGYRVFYKVLNSKNFGVPQNRERIYIVAFRNDIA 178
>gi|127431|sp|P00476.1|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName:
Full=Cytosine-specific methyltransferase SPRI
gi|224091|prf||1010250A methyltransferase
Length = 439
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D+++ PCQ F+ G +K D R T +ET+ + + ENVKG +
Sbjct: 70 DLLVGGSPCQSFSVAGHRKGFEDTRGTLFFQYVETLKE-KQPKFFVFENVKGLINHDKGN 128
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ +++ + G+R LL+ F VP +R R Y+I R + E S F+
Sbjct: 129 TLNVMAEAFSEVGYRIDLELLNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFK 183
>gi|428772287|ref|YP_007164075.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428686566|gb|AFZ46426.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 652
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVI 57
L+ H+ E V A +I+ A YKHNF N + F+ ++I +SP D++
Sbjct: 18 LAFHSLGGECVFASEIDIHARKTYKHNFYPINPELFDKGMFN-DDIRKISPDEIPDFDIL 76
Query: 58 LMSPPCQPFTRTGLQKDIADARCTA---LSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
PCQPF++ G ++ D + L + I I I + LENV+G +
Sbjct: 77 CAGFPCQPFSQAGYKRGFNDNHKSERGNLFFNIVDILEIKQPKAFFLENVRGLISHDKGN 136
Query: 112 SRDLITSMLTRA-GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
+ +I +L + + F ++ + +G+P R R ++I R SF F +
Sbjct: 137 TFKIIRDILEQELNYSFYYQIVKASDYGLPQLRPRTFIIGFRDEGFFK---SFNFPSVKP 193
Query: 171 LMTELPKLKANTC 183
L + + C
Sbjct: 194 LKFNMSDVWGGKC 206
>gi|420422764|ref|ZP_14921841.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393036698|gb|EJB37737.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I + + D ++ P
Sbjct: 17 RLGLERCHLKCVGHAEINDEALRTYELFFKDTHNFGDLMR---INPNDLPNFDALISGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ +I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKIIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + +R R Y++ R H
Sbjct: 133 LQEAGYTTHYQILNSADFQLAQNRERLYIVGFRKDLKH 170
>gi|386761870|ref|YP_006235505.1| DNA-cytosine methyltransferase [Helicobacter cinaedi PAGU611]
gi|385146886|dbj|BAM12394.1| putative DNA-cytosine methyltransferase [Helicobacter cinaedi
PAGU611]
Length = 277
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+ V A +I+++A Y NFP T L G +I S + D++ PCQ F+ G
Sbjct: 9 KCVFASEIDSNAQITYTQNFPHTPLYG-DITQDSTQAFIPKDFDILCAGFPCQAFSIAGY 67
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSRSRDLITSMLTRAGF-RF 127
QK D R T L + I I + + L LENVK + ++ +I L + +
Sbjct: 68 QKGFEDTRGT-LFFEIAKITKVHKPKVLFLENVKNLKNHNNGKTFQVIKYTLESLNYIVY 126
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
L + T +P +R R ++IA + A F F + +L
Sbjct: 127 DSILNTATHANIPQNRERIFIIAFHKDKV-KNHADFSFPSPIKL 169
>gi|425469988|ref|ZP_18848876.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9701]
gi|389880133|emb|CCI39083.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9701]
Length = 407
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY +NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 119 IVAAFDNWIPAIDVYSNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 175
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + S Q ++ENV E S+ + G+
Sbjct: 176 G-KRDEGLGRANLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILTQAKQIFKSHGYGLTG 233
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 234 KVINSCYCGVPQTRKRYFLIGK 255
>gi|429192518|ref|YP_007178196.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|448326430|ref|ZP_21515789.1| hypothetical protein C490_13541 [Natronobacterium gregoryi SP2]
gi|429136736|gb|AFZ73747.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|445612067|gb|ELY65806.1| hypothetical protein C490_13541 [Natronobacterium gregoryi SP2]
Length = 321
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQ 64
+ E V + +I+ A + Y+ N+ G +I I +++A + DV+L PC
Sbjct: 25 GYEGECVFSCEISEEAQNAYERNW------GESITEHDIRDVDAGAVPDHDVLLACWPCP 78
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSML 120
F+R G + D R L + I I + LLENVK +GS + + S L
Sbjct: 79 SFSRMGKKDGFEDERGM-LFFEIVDILKKKQPKAFLLENVKNLRSVNDGS-AFQTVKSHL 136
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
T AG+ + +L+ FG+P R R L+ R A
Sbjct: 137 TAAGYHVYDEVLNALDFGLPQHRERLILVGFREDIA 172
>gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR]
Length = 439
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D+++ PCQ F+ G +K D R T +ET+ + + ENVKG +
Sbjct: 70 DLLVGGSPCQSFSVAGHRKGFEDTRGTLFFQYVETLKE-KQPKFFVFENVKGLINHDKGN 128
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ +++ + G+R LL+ F VP +R R Y+I R + E S F+
Sbjct: 129 TLNVMAEAFSEVGYRIDLELLNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFK 183
>gi|309789605|ref|ZP_07684186.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG-6]
gi|308228341|gb|EFO81988.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 342
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG--FEGSRS 112
DV++ PPCQPF+ G Q+ +AD+R I+ I + + + ENV+G ++ R
Sbjct: 80 DVVIGGPPCQPFSVGGYQRGLADSR-DGFPIFIKAIENV-RPKIWIFENVRGLMYQNKRY 137
Query: 113 RDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ I L G+ +L+ +GVP +R R ++ +
Sbjct: 138 LEAIMHHLEDLGYIIDAKILNAVHYGVPQNRERLIVVGHKG 178
>gi|427735817|ref|YP_007055361.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427370858|gb|AFY54814.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 337
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 35 NLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIP 94
NL+G + EI S DVI+ PCQPF+ G QK + D+R I + +
Sbjct: 58 NLKGECTKVVLTNEIELPSCDVIIGGVPCQPFSVGGKQKGLKDSR-DGFPIFINAVKKL- 115
Query: 95 SLQCLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ Q L ENV+G + D I L + + LL+ FGVP +R R ++
Sbjct: 116 NPQIWLFENVRGLLYRNKWYFDEIIQSLQNLDYIVEYKLLNAVNFGVPQNRERLIVVG 173
>gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening
vector pSPRX]
Length = 659
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D+++ PCQ F+ G +K D R T +ET+ + + ENVKG +
Sbjct: 296 DILVGGSPCQSFSVAGHRKGFEDTRGTLFFQYVETLKE-KQPKFFVFENVKGLINHDKGN 354
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ +++ + G+R LL+ F VP +R R Y+I R + E S F+
Sbjct: 355 TLNVMAEAFSEVGYRIDLELLNSKFFNVPQNRERLYIIGIREDLIKNEEWSLDFK 409
>gi|420435526|ref|ZP_14934525.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492265|ref|ZP_14990839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420526289|ref|ZP_15024690.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051385|gb|EJB52336.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106704|gb|EJC07247.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393131594|gb|EJC32017.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 312
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI + + C LLENVKG + ++
Sbjct: 60 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPI-CFLLENVKGLISHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKIIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|420409912|ref|ZP_14909057.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393029045|gb|EJB30127.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 312
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + Y I I + +C LLENVKG + ++
Sbjct: 60 DVLVSGFPCQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKIIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|20094956|ref|NP_614803.1| site-specific DNA methylase [Methanopyrus kandleri AV19]
gi|19888204|gb|AAM02733.1| Site-specific DNA methylase [Methanopyrus kandleri AV19]
Length = 315
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI--NAMSPDVILMSPPCQPFT 67
+++ ++ N + + Y+ NFP + R+IQ EEI PDVI+ PPC+PFT
Sbjct: 23 GFKILGGVENNPAPAATYRENFPEAEVIERDIQRVDSEEIVDELGEPDVIIGGPPCEPFT 82
Query: 68 RTGLQKD-------IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML 120
++ D + + + I + + ++ENV +
Sbjct: 83 AANAERKPNPLDRLYDDPVGRLVLHFVRIIGDL-QPEVFVMENVPAIMEGPLEKALRKEF 141
Query: 121 TRAGFRFQEF-LLSPTQFGVPNSRTRYYL 148
RAG+ F +L +GVP+ R R ++
Sbjct: 142 ARAGYDEIHFNVLQAVHYGVPSYRRRVFI 170
>gi|428299219|ref|YP_007137525.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235763|gb|AFZ01553.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 447
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----------SPDVI 57
S E+ AID N A + Y+ NFP + ++I + +EI D++
Sbjct: 26 GVSFEIGIAIDNNPIALATYQQNFPNATVLCKDICEVTGKEIRDRIQAKYSDWDGEIDLV 85
Query: 58 LMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLIT 117
PPCQ F+ G Q+++ D R + + + + L ++ENV G E + +
Sbjct: 86 FGGPPCQGFSVAG-QQNVEDKRNGLVGEFVRLVLELNPLAA-IMENVPGIENQKFGCITA 143
Query: 118 SM--LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
++ + + ++ L+ + +GVP +R R + +A +
Sbjct: 144 NLQAVLEEHYFLSKWNLNASNYGVPQARKRVFFVASK 180
>gi|420495530|ref|ZP_14994094.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|420506076|ref|ZP_15004591.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393111841|gb|EJC12362.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393115581|gb|EJC16091.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
Length = 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI + + C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPI-CFLLENVKGLISHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKIIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|334121160|ref|ZP_08495234.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333455446|gb|EGK84095.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 343
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
R E V + +IN+ Y+ NF +I+ ++P D+
Sbjct: 14 RQGFEKIGFECVFSCEINSKCREAYQKNFGEV----------PFADISNINPADLADFDI 63
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSR 113
++ PCQPF+ G + D R T L + I I I + ++LENVK + +
Sbjct: 64 LVAGFPCQPFSICGKKLGFEDTRGT-LFFEICKIIKIKQPKVIVLENVKHLIHHDKGNTL 122
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+I + L G+R +L+ FG+P R R ++IA +
Sbjct: 123 KVIIASLEDLGYRVNYQMLNAKDFGIPQHRERIFIIATQG 162
>gi|260886138|ref|ZP_05736578.2| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
gi|260850757|gb|EEX70626.1| modification methylase EcoRII [Prevotella tannerae ATCC 51259]
Length = 427
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFE---GSR 111
DV+ PCQPF+ +G QK AD R T L + + I + LENVK + G R
Sbjct: 168 DVLCAGFPCQPFSISGKQKGFADTRGT-LFFDVCQILERKHPSVVFLENVKHLQYHDGGR 226
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ ++I L G+ + +L+ FGVP +R R +I
Sbjct: 227 TLEVILEKLKELGYHTEWKILNAADFGVPQNRERIIIIG 265
>gi|420425583|ref|ZP_14924643.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393040481|gb|EJB41499.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLISHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|421564461|ref|ZP_16010260.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|402346058|gb|EJU81162.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
Length = 276
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|126649199|ref|XP_001388272.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
gi|126117194|gb|EAZ51294.1| DNA methyltransferase PMT1 - like protein [Cryptosporidium parvum
Iowa II]
Length = 303
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 97 QCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
+ +ENV FE S + + ML++ F EF+LSPT GVPN+R RYY ++ R +A
Sbjct: 12 KAWFVENVANFETSNTHKEMIKMLSKLNFCTFEFMLSPTLIGVPNTRVRYYCVSVRKDSA 71
Query: 157 H 157
+
Sbjct: 72 N 72
>gi|421765734|ref|ZP_16202515.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
gi|407625819|gb|EKF52507.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
Length = 407
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
+ + +A NFP L R+I E + DVI+ PCQ F+ G +K +D
Sbjct: 41 EFDKNAQETISLNFPDVKLDRRDIHVVDTETNDVPDTDVIIGGFPCQAFSIAGYRKGFSD 100
Query: 78 ARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSP 134
R L I + + +ENVK + S + +I LT AG+ + +L+
Sbjct: 101 ERGDLFFELYRIIKK-HQPKVIFIENVKNLVTHDHSNTFRVIREHLTLAGYYVKWKVLNG 159
Query: 135 TQFG-VPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL 175
+G +P +R R Y++ A +F F EL T+L
Sbjct: 160 KDYGNIPQNRERIYVVGFADKKAFD---AFEFPKEIELTTKL 198
>gi|254411906|ref|ZP_05025682.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196181628|gb|EDX76616.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 456
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-----DVILMSPPCQPFTRTGLQ 72
+I+ A +VYK NF + N + +I A+ D+++ PCQP++ G
Sbjct: 56 EIDKEAVNVYKKNF----ISYINADELYLGDIIALHKLPFEVDILVGGVPCQPWSIAGKL 111
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQE 129
+ + D R L + + + + +LENVKG R+R + I LT+ G++ +
Sbjct: 112 QGLDDPR-GKLWIDVFRVVQVNQPKGFILENVKGLTEPRNRPSLNYIIQSLTQCGYQVKF 170
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+L+ FG+P R R +++ R+ S F
Sbjct: 171 QVLNSYDFGLPQDRDRVFIVGIRNDIEKSKSFDF 204
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 11 LEVVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILMSPPCQP 65
E + A+D SA + + HNFP+ ++ I++ I++ + ++I+ PPCQ
Sbjct: 28 FETLLALDFEQSAINTFSHNFPKAQVICGDITDIKIKNTLIKQAKRLKVNMIIGGPPCQG 87
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGFEGSRS---RDLITSML 120
F+ G + + D R +E + + LQ ++ENVK + + ++ I +
Sbjct: 88 FSLKGKKLGLQDPRNF---LFLEYLDIVKQLQPELFIIENVKSIFSTANGYFKNEIERHI 144
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----PAAHSSEASFCFETSSELMTEL 175
G++ +L+ F VP +R R + IA + PA SE C + + +++L
Sbjct: 145 QDLGYKVDSAILNAKDFCVPQNRERAFFIAHKKEYLGFPAP--SEMQVCVKDA---ISDL 199
Query: 176 PKLKAN 181
L++N
Sbjct: 200 AYLQSN 205
>gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4]
gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4]
Length = 350
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPFTR 68
E+V A +++ +A+ Y+H + +G +Q + E++ + D+++ PCQ F+
Sbjct: 27 EIVWANEVDRNASITYRHFW-----KGEYLQEADVTEVDKTTISQLDILIGGFPCQAFSI 81
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL-----QCLLLENVKGFEG---SRSRDLITSML 120
G +K D R +++ I A + + ++LENVK + + +I L
Sbjct: 82 AGYRKGFEDERGNMFFQILDVIDAQEKMYGTKPKAIMLENVKNLQNHDKGNTFKVIKERL 141
Query: 121 TRAGFRFQEFLLSPTQFG-VPNSRTRYYLIA 150
G+ + +L+ ++G VP +R R Y++
Sbjct: 142 EEKGYTIKAKVLNSMEYGNVPQNRERIYIVG 172
>gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|416199504|ref|ZP_11619409.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|421537095|ref|ZP_15983285.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|421541419|ref|ZP_15987539.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|421549637|ref|ZP_15995648.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|421553827|ref|ZP_15999780.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|421556067|ref|ZP_16001984.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|421560236|ref|ZP_16006095.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|421566550|ref|ZP_16012294.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|427826168|ref|ZP_18993227.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|433464072|ref|ZP_20421567.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|433470383|ref|ZP_20427783.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|433472462|ref|ZP_20429833.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|433474559|ref|ZP_20431907.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|433476647|ref|ZP_20433975.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|433478804|ref|ZP_20436104.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|433480890|ref|ZP_20438163.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|433483014|ref|ZP_20440255.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|433485106|ref|ZP_20442314.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|433487265|ref|ZP_20444444.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|433489438|ref|ZP_20446577.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|433493661|ref|ZP_20450737.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|433504001|ref|ZP_20460946.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|433506124|ref|ZP_20463045.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|433510361|ref|ZP_20467206.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|433512444|ref|ZP_20469247.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|433514551|ref|ZP_20471328.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|433516661|ref|ZP_20473415.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|433518863|ref|ZP_20475591.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|433520863|ref|ZP_20477566.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|433522982|ref|ZP_20479656.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|433525099|ref|ZP_20481746.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|433527239|ref|ZP_20483852.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|433529338|ref|ZP_20485938.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|433531455|ref|ZP_20488025.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|433533666|ref|ZP_20490215.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|433535665|ref|ZP_20492185.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|433537829|ref|ZP_20494316.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|433540017|ref|ZP_20496475.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis]
gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|389604691|emb|CCA43617.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
alpha522]
gi|402320092|gb|EJU55590.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|402320113|gb|EJU55610.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|402332286|gb|EJU67615.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|402334394|gb|EJU69683.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|402337920|gb|EJU73159.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402340409|gb|EJU75609.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|402345154|gb|EJU80278.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|432206110|gb|ELK62123.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|432211816|gb|ELK67760.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|432212599|gb|ELK68535.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|432212619|gb|ELK68554.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|432217800|gb|ELK73665.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|432219012|gb|ELK74862.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|432219510|gb|ELK75354.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|432224172|gb|ELK79944.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|432225065|gb|ELK80820.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|432226030|gb|ELK81763.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|432230434|gb|ELK86109.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|432231839|gb|ELK87494.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|432243384|gb|ELK98895.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|432244399|gb|ELK99889.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|432250639|gb|ELL06030.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|432250717|gb|ELL06105.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|432256453|gb|ELL11775.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|432256685|gb|ELL12005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|432256972|gb|ELL12281.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|432262846|gb|ELL18078.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|432263061|gb|ELL18289.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|432263610|gb|ELL18826.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|432267308|gb|ELL22486.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|432269720|gb|ELL24874.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|432269989|gb|ELL25136.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|432274219|gb|ELL29312.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|432275969|gb|ELL31031.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|432276676|gb|ELL31731.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|432278226|gb|ELL33269.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
Length = 276
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|292897792|ref|YP_003537161.1| cytosine-specific DNA methylase [Erwinia amylovora ATCC 49946]
gi|428783476|ref|ZP_19000972.1| modification methylase [Erwinia amylovora ACW56400]
gi|291197640|emb|CBJ44735.1| putative modification methylase (cytosine-specific DNA methylase)
[Erwinia amylovora ATCC 49946]
gi|426277967|gb|EKV55689.1| modification methylase [Erwinia amylovora ACW56400]
Length = 372
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A D + A YK N ++ ++ + + ++ + DV+ PCQPF+ G
Sbjct: 31 DVVWANDFDADACLTYKRNI--GDIIHGDVTTLDVPDVKNL--DVLTAGFPCQPFSNAGS 86
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF-----EGSRSRDLITSMLTRA-GF 125
+K I D R + I + S + ++ ENV+G E + D I LT + G+
Sbjct: 87 RKGINDPRGQLYKQTFKFIKKL-SPKVVVFENVRGLLSTKVENGKLIDEIVDTLTNSLGY 145
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
L++ + FGVP +R R LIA
Sbjct: 146 HVMYRLVNFSHFGVPQNRIRVILIA 170
>gi|427729033|ref|YP_007075270.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427364952|gb|AFY47673.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 740
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILM 59
RL+ E V + +IN + VY +NF +I + I +I+ + DV+
Sbjct: 33 RLAFGKSQYECVFSCEINEACRQVYFNNFA-------DIPEYDISKIDIRNLPYFDVLTA 85
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G +K D R T ++ E I I + ++LENVK + R+ ++I
Sbjct: 86 GFPCQPFSICGRRKGFHDTRGTLFFHICEIIEHI-NPPVVVLENVKHILHHDQGRTLEVI 144
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+ +++ FG+P +R R +A ++
Sbjct: 145 LYSLEDIGYAVNYEIINSKDFGLPQNRERVVFVATKN 181
>gi|418967793|ref|ZP_13519431.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
gi|383342252|gb|EID20480.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
Length = 393
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 53 SPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGF---- 107
S D+++ PPCQ F+ G +K+ D R + IE I + P++ L ENV+GF
Sbjct: 79 SVDLVVGGPPCQGFSMAGKRKN-DDIRNQLMHSYIEFIKLVQPTM--LFFENVQGFTVGF 135
Query: 108 ----EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ + D++ S L G+ +++ +++GVP +R R+ L A ++ A
Sbjct: 136 KDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKRFILFASKNGA 187
>gi|153870986|ref|ZP_02000267.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152072545|gb|EDN69730.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 350
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 7/155 (4%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN---AMSPDVIL 58
E+ S+ + V + DI + N + +I+ S E + P +I+
Sbjct: 131 EQASDDIIQFKTVFSTDIESYVEQTILTNRAEWDFLRADIRELSPEIVRRKMGKKPYIII 190
Query: 59 MSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITS 118
PPCQPF+ G Q+ D T + +E I + S + +++ENV G +S ++I
Sbjct: 191 GGPPCQPFSVAGKQQATKDTLGTLYRHYVEQIHFL-SPEMIIMENVYGLSQVKSANMIEE 249
Query: 119 M---LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + G++ L +G P R R + +A
Sbjct: 250 IYKSFEQIGYKITHRELMAADYGTPQKRRRLFFVA 284
>gi|420485875|ref|ZP_14984492.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420516717|ref|ZP_15015176.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420518084|ref|ZP_15016538.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393101687|gb|EJC02255.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393121765|gb|EJC22245.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|393123583|gb|EJC24052.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
Length = 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIH-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|418166559|ref|ZP_12803215.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211039|ref|ZP_15668023.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|421231707|ref|ZP_15688352.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|353830155|gb|EHE10285.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573762|gb|EJG34349.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|395596197|gb|EJG56419.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
Length = 351
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQ 64
V+ ID + A ++ N + + +I + S EE I D+I+ PPCQ
Sbjct: 24 GFNVLLGIDNDEKALETFQKNHQNSEILCGDIANISYEEDIKPIIGEQKIDIIVGGPPCQ 83
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLITSML 120
+ +G ++ LSY+ P+ ++ENV G F+G + +D I
Sbjct: 84 GMSLSGPRRFDDPRNKLYLSYIRLVREIQPT--AFVIENVIGIVSLFKG-QIKDTIIEEF 140
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
++ G++ Q +L + +GVP +R R + R+ EA T+ +++LP L+
Sbjct: 141 SKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRNDGFEYPEALGTIITTEMAISDLPTLE 199
>gi|292486555|ref|YP_003529421.1| modification methylase [Erwinia amylovora CFBP1430]
gi|291551968|emb|CBA19005.1| modification methylase [Erwinia amylovora CFBP1430]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
+VV A D + A YK N ++ ++ + + ++ + DV+ PCQPF+ G
Sbjct: 38 DVVWANDFDADACLTYKRNI--GDIIHGDVTTLDVPDVKNL--DVLTAGFPCQPFSNAGS 93
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF-----EGSRSRDLITSMLTRA-GF 125
+K I D R + I + S + ++ ENV+G E + D I LT + G+
Sbjct: 94 RKGINDPRGQLYKQTFKFIKKL-SPKVVVFENVRGLLSTKVENGKLIDEIVDTLTNSLGY 152
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
L++ + FGVP +R R LIA
Sbjct: 153 HVMYRLVNFSHFGVPQNRIRVILIA 177
>gi|386730222|ref|YP_006196605.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|387603777|ref|YP_005735298.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|404479805|ref|YP_006711235.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
gi|418311836|ref|ZP_12923354.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|418979015|ref|ZP_13526814.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|283471715|emb|CAQ50926.1| modification methylase EcoRII (Cytosine-specificmethyltransferase
EcoRII) (M.EcoRII) [Staphylococcus aureus subsp. aureus
ST398]
gi|365233356|gb|EHM74312.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21331]
gi|379993286|gb|EIA14733.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus DR10]
gi|384231515|gb|AFH70762.1| Type II restriction-modification system methylation subunit
[Staphylococcus aureus subsp. aureus 71193]
gi|404441294|gb|AFR74487.1| DNA Methyltransferase [Staphylococcus aureus 08BA02176]
Length = 397
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D+++ PCQ F++ GL+K D R T L + I I +C LLENVK + +
Sbjct: 148 DILVAGFPCQAFSQAGLKKGFNDTRGT-LFFDIARILKAKRPKCFLLENVKNLRSHDKGK 206
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSEL 171
+ D+I + L + +L FG P +R R Y++ ++E +F F +
Sbjct: 207 TFDIIMNTLLELDYDVSSSILRARDFGCPQNRERIYIVGFDKQQIKNAE-NFSFPEPLPI 265
Query: 172 MTELPKLKANTCN 184
T L + + N
Sbjct: 266 ETSLGSILESNVN 278
>gi|444424849|ref|ZP_21220301.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241972|gb|ELU53490.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 418
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 31/163 (19%)
Query: 16 AIDINTSANSVYKHNF--------------PRTNLRGRNIQSFSIEEINAMSP--DVILM 59
A++ + A S +KHN P +N+ E++ A+ D+I
Sbjct: 37 AVEKDPMAFSTFKHNLIDGKHAHFDWPNWLPEEATTIQNLLEKYPEQLTALKGKVDLIAG 96
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF-------EGSRS 112
PPCQ F+ G +++ D R I+ + I S + LLLENV+GF EG ++
Sbjct: 97 GPPCQGFSLAG-RRNAKDPRNKLSDEYIKMV-EIVSPKYLLLENVRGFNASFKALEGKKA 154
Query: 113 RD----LITSMLTRAGFR-FQEFLLSPTQFGVPNSRTRYYLIA 150
+ ++ + L + G++ F +FL S FGVP RTR+ +I
Sbjct: 155 KKPHSMIVKAKLEKLGYKVFTDFLCS-ADFGVPQKRTRFIMIG 196
>gi|307152624|ref|YP_003888008.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306982852|gb|ADN14733.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 708
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 53 SPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG--FEGS 110
+P VI+ PPCQPF++ G Q + D+R +L P + L ENV+G +
Sbjct: 90 NPKVIIAGPPCQPFSKGGYQLGLLDSRDGFPIFLDAVERYHPKIA--LFENVQGMLYRNK 147
Query: 111 RSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
R + I + L+ G+ + +L+ + +GVP R R + +A +S
Sbjct: 148 RYFEEIVATLSTNGYFVEWKILNASDYGVPQRRQRLFCVAHQS 190
>gi|427718582|ref|YP_007066576.1| DNA (cytosine-5-)-methyltransferase [Calothrix sp. PCC 7507]
gi|427351018|gb|AFY33742.1| DNA (cytosine-5-)-methyltransferase [Calothrix sp. PCC 7507]
Length = 172
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF----SIEEINAMSPDVILMSPPCQP 65
V ++ I+ A +HN P + ++++F S+++I + PD+++ PPCQ
Sbjct: 26 GFSVPLSVKIDAWACDTLRHNRPSMTVIQHDLRNFNTASSVKDICLLKPDIVIGGPPCQG 85
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG------FEGSRSRDLITS 118
F+ G QKD D R + + I + + ++ENVKG FEG + D+I
Sbjct: 86 FSIAGPAQKDPKDPRNSLFINFAQWISFLEP-KAFVMENVKGLLSRKNFEGIKVIDIIKE 144
Query: 119 MLTRAGFRFQEFLLS 133
G+ + +LL+
Sbjct: 145 TFENLGYFVEVWLLN 159
>gi|390438968|ref|ZP_10227394.1| Modification methylase NgoBI [Microcystis sp. T1-4]
gi|389837617|emb|CCI31518.1| Modification methylase NgoBI [Microcystis sp. T1-4]
Length = 340
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y+ NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDARAIYQANF------GDQPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I + +LENVK +G ++ +I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKVKQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|347533695|ref|YP_004841703.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345505091|gb|AEN99771.1| hypothetical protein LSA_1p00140 [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 438
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
++ A DI +A Y++N + R+I + E+ A DV++ PCQPF+ G +
Sbjct: 109 IIFANDILKAAVENYRYNI--GPIDDRDITKINTSELPAA--DVVVGGFPCQPFSNAGNR 164
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLITSMLTRA--G 124
D R LI I A + + +L+ENV+G +GS+ D I +L A G
Sbjct: 165 LGTDDDRGNLYLELIRIINA-KNPKVVLMENVRGLLSIKNKDGSKLIDTIVYLLEHAASG 223
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ LL + +GVP +R R ++ R + F FE
Sbjct: 224 YTVTYKLLRASDYGVPQNRYRVMIVGIR------KDLGFKFE 259
>gi|1709158|sp|P50192.1|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName:
Full=Cytosine-specific methyltransferase HphIA; AltName:
Full=M.Hphi(C)
gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus parahaemolyticus]
Length = 372
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFS----IEEINAMSPDVILMSPPCQPFTRTG- 70
+++I Y+ NFP + +++ + S + IN DV++ PPCQ F+ G
Sbjct: 71 SVEIEPHYCDTYRANFPDHQVLQQDLTTLSDDNLLRHINHRKVDVVIGGPPCQGFSMAGK 130
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRF 127
+ + AD L + + + ++ENV ++R IT R G++
Sbjct: 131 IGRTFADDPRNHLFKEFVRVVKLTQPKFFVMENVARLFTHNSGKTRAEITEQFERLGYKV 190
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFC------FETSSELMTELPKLKAN 181
+ +L+ FGVP R+R I ++ E +F + T + + PKL A
Sbjct: 191 KCKVLNAADFGVPQLRSRIVFIGRKD----GGEITFPEPSHTEYNTVGDAIGHFPKLNAG 246
Query: 182 TCNPLLSRMTLH 193
+ +L+ ++
Sbjct: 247 ENSLILNHEAMN 258
>gi|420498169|ref|ZP_14996728.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|420528416|ref|ZP_15026807.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|420530442|ref|ZP_15028824.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
gi|393111408|gb|EJC11930.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|393132770|gb|EJC33188.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|393135331|gb|EJC35732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
Length = 318
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|257061088|ref|YP_003138976.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256591254|gb|ACV02141.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 331
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + V + +IN VY +NF P ++ N + DV+
Sbjct: 19 RLAFEQAQYQCVYSCEINEYCQKVYYNNFDECPDNDVTQINPDTLP-------DFDVLTA 71
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G +K D R T Y+ + I A Q ++LENVK + ++ + I
Sbjct: 72 GFPCQPFSICGKKKGFNDTRGTLFFYICQIIAA-KQPQAVILENVKHLIHHQQGKTLETI 130
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
L + LL+ FGVP R R +IA R
Sbjct: 131 IYALEDLEYLVDYQLLNAKDFGVPQHRERIVIIATR 166
>gi|428319250|ref|YP_007117132.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428242930|gb|AFZ08716.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 420
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++I+ + ++ NFP ++ +++ + + EI S DV++ PC
Sbjct: 29 GFDVLASVEIDPIHCATHEFNFPLCSILCKDVTALTGSEIRKKSALGRREIDVVISGSPC 88
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT-- 121
Q F+ G ++D+ D R + + + + + + ++ENV G ++L+ +++
Sbjct: 89 QGFSMMG-KRDVDDPRNSLIFHFQRLVLELKP-KFFVMENVPGIASGEHKELLNILISSF 146
Query: 122 -RAGFRFQE--FLLSPTQFGVPNSRTRYYLIA 150
+ G++ +E +L+ +GVP +R R +LI
Sbjct: 147 LKCGYKVEENYQVLNAVNYGVPQARKRLFLIG 178
>gi|421710573|ref|ZP_16149926.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421723806|ref|ZP_16163057.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407209453|gb|EKE79347.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407223953|gb|EKE93734.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 312
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G I + D ++ P
Sbjct: 11 RLGLERYHLKCVGHAEINHEALRTYELFFKDTHNFG---DLMRINPNDLPDFDALISGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSM 119
CQ F+ G +K + D R T + Y I I + +C LLENVKG + ++I
Sbjct: 68 CQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLINHNKKATFNIIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 127 LQGAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|374587417|ref|ZP_09660509.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
gi|373876278|gb|EHQ08272.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
Length = 343
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + V + +IN SA YK NF P ++R NI + I DV+
Sbjct: 23 RLAFESVGARCVFSSEINPSARRTYKENFGDEPAGDIR--NIHAMDIPRF-----DVLCA 75
Query: 60 SPPCQPFTRTGLQK--------DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG-- 109
PCQPF+ G+ K AD L + I I LLENVK +
Sbjct: 76 GFPCQPFSSAGVSKKQSMGRPHGFADKTSGTLFFEILRILEWHQPSAFLLENVKNLQAHD 135
Query: 110 -SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA-SFCFET 167
R+ +I L G++ L+ +F VP R R Y+ R AA ++ F
Sbjct: 136 RGRTFTVIQKSLEALGYKLFVQLID-GRFWVPQKRQRIYIAGFRDRAAWAAFVRRFEDAI 194
Query: 168 SSELMTE--LPKL 178
S L E LPKL
Sbjct: 195 SGSLFDESPLPKL 207
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMSPPCQP 65
E+ A+D N ++ NFP +I + E I DV++ PPCQ
Sbjct: 21 GFEIKLAVDSNPIVAKTHEFNFPEIPFFSDDINQLTGFELFNLIEGEEIDVLIGGPPCQG 80
Query: 66 FTRTGLQKDIADARCTAL----SYLIETIPAIPSL--QCLLLENVKGFEGSRSRDLITSM 119
F+ G + R TA ++E I + L + ++ENVKG D I +
Sbjct: 81 FSTIGKRVSSNFERRTAEDERNKLILEYIRILNQLKPKYFVIENVKGLLTMDKGDFIKGV 140
Query: 120 ---LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
L + G+ ++ LL+ +GVP R R ++I R E +F T SE
Sbjct: 141 YKELDKTGYDYKLKLLNMADYGVPQLRERVFIIGNRL----GHEVNFPLPTHSE 190
>gi|425431861|ref|ZP_18812442.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
gi|410715576|gb|EKQ72990.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
Length = 312
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|410625897|ref|ZP_11336667.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
gi|410154517|dbj|GAC23436.1| DNA (cytosine-5-)-methyltransferase [Glaciecola mesophila KMM 241]
Length = 430
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I+E N DV+L PCQPF+ +G + D L + + I + LLENV
Sbjct: 147 KIQERNIPDHDVLLAGFPCQPFSYSGRCEGFEDKTRGTLFFDVLRILEKKRPKFALLENV 206
Query: 105 KGFEGSRSRD---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
KGF+ + + L AG+ +L+ +GVP R R+Y +A R
Sbjct: 207 KGFKSHNKGETMFIALKALEEAGYEPYWTILNSYDYGVPQYRERWYCVAIRK 258
>gi|406973896|gb|EKD97156.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 351
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQP 65
HA + + A+D +A +K +F T++ +I +F+ + N DV++ PCQ
Sbjct: 20 HAEGFQTLLALDNFAAATETFKRHFTDTDVVTSDIYTFNSSKKNPYPKADVVMGGYPCQS 79
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---- 121
F+ GL+ D R + + I + + ENV G ++ + +
Sbjct: 80 FSMGGLRNPSKDDRSNLFLGFADAVNKI-KPKVFIAENVSGLAKLQNGEWFKKQIDVYEN 138
Query: 122 --RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
A +R Q LL+ +GVP +R R ++ R
Sbjct: 139 QLAAKYRVQSLLLNAADYGVPQNRKRVIIVGVRD 172
>gi|406663090|ref|ZP_11071163.1| Modification methylase HaeIII [Cecembia lonarensis LW9]
gi|405552862|gb|EKB48193.1| Modification methylase HaeIII [Cecembia lonarensis LW9]
Length = 314
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E++ A D A VY+ NF +E + ++ P +I+ PPCQ F+
Sbjct: 21 GFEILAAFDKWEPAVKVYRDNFNHPIYDTDLGSEEGLEFVKSLKPQMIIGGPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G + + +SY A P + ++ENV+ S + +AG+
Sbjct: 81 GKRDETLGRADLTISYANIVASAKP--EWFVMENVERITKSHILKEALQIFKKAGYGISY 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMT 173
+L + GVP SR R++L+ + + F SS+ MT
Sbjct: 139 QVLDASFCGVPQSRKRFFLVGHKHSTDNFLNPYFNKNLSSKQMT 182
>gi|420402259|ref|ZP_14901449.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017000|gb|EJB18155.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 312
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ T F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSTDFQLAQKRERLYIVGFRKDLKH 164
>gi|373117713|ref|ZP_09531857.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371668110|gb|EHO33221.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 379
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D++ PCQ F+ G +K DAR T L + I + LLLENV G +G R
Sbjct: 62 DLLCGGFPCQAFSLAGRRKGFDDARGT-LFFEIARLAETRRPSYLLLENVPGLLNHDGGR 120
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
+ I S L+ G+ + +L+ FGVP SR R +LI P
Sbjct: 121 TFAAILSALSDLGYHVEWAVLNSKHFGVPQSRRRVFLICYLDP 163
>gi|225628987|ref|ZP_03787021.1| Modification methylase HgiDI [Brucella ceti str. Cudo]
gi|261319385|ref|ZP_05958582.1| modification methylase [Brucella pinnipedialis B2/94]
gi|261756709|ref|ZP_06000418.1| DNA-cytosine methyltransferase [Brucella sp. F5/99]
gi|265986615|ref|ZP_06099172.1| modification methylase [Brucella pinnipedialis M292/94/1]
gi|340792287|ref|YP_004757751.1| DNA-cytosine methyltransferase [Brucella pinnipedialis B2/94]
gi|225616833|gb|EEH13881.1| Modification methylase HgiDI [Brucella ceti str. Cudo]
gi|261298608|gb|EEY02105.1| modification methylase [Brucella pinnipedialis B2/94]
gi|261736693|gb|EEY24689.1| DNA-cytosine methyltransferase [Brucella sp. F5/99]
gi|264658812|gb|EEZ29073.1| modification methylase [Brucella pinnipedialis M292/94/1]
gi|340560746|gb|AEK55983.1| DNA-cytosine methyltransferase [Brucella pinnipedialis B2/94]
Length = 274
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 27 YKHNFPRTNLRGRNIQSFSIEEI-------NAMSPDVILMSPPCQPFTRTGLQKDIADAR 79
Y+HN GR + +++I M+PD+I PPCQ ++ G + + +A
Sbjct: 4 YRHNV------GRQVHKHDLKDIFAVAPVIGGMAPDLITGGPPCQDYSVAGKRVEGENAS 57
Query: 80 CT-ALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 138
T A + L+ + Q +ENV S + ML RAG+ E L + +G
Sbjct: 58 LTGAFAMLV----CLARPQWFAMENVPQAARSEAWTNGRKMLVRAGYGLSECKLDASWYG 113
Query: 139 VPNSRTRYYLIAK 151
VP R R ++I +
Sbjct: 114 VPQLRKRLFVIGR 126
>gi|417321064|ref|ZP_12107604.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
Length = 392
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF-----PRTNLRGRNIQSFSIEE------INAM 52
L+ H LE+V AI+++ +A+ Y+ N +T++ +I S EE IN
Sbjct: 17 LAAHNLGLEIVAAIELDKTASQTYQSNLVERLGQKTSILNEDILSIDPEELRKSLGINIG 76
Query: 53 SPDVILMSPPCQPFTRTGLQK-DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR 111
+IL PPCQ F+ ++ + D R L + + A + L+ENV G R
Sbjct: 77 ELSIILGGPPCQGFSSHRIKDAGVDDPRNKLLLRYFDFVAAFYP-KAFLVENVAGLFWER 135
Query: 112 SRDLITSMLTRAGFRFQEFL----LSPTQFGVPNSRTRYYLIAKR 152
+ +T L A + L+ +GVP +R R +++ R
Sbjct: 136 HKSYLTRFLDLANANNYRIVFCNTLNAKDYGVPQNRKRAFILGIR 180
>gi|433656500|ref|YP_007273879.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
gi|432507188|gb|AGB08705.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
Length = 392
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF-----PRTNLRGRNIQSFSIEE------INAM 52
L+ H LE+V AI+++ +A+ Y+ N +T++ +I S EE IN
Sbjct: 17 LAAHNLGLEIVAAIELDKTASQTYQSNLVERLGQKTSILNEDILSIDPEELRKSLGINIG 76
Query: 53 SPDVILMSPPCQPFTRTGLQK-DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR 111
+IL PPCQ F+ ++ + D R L + + A + L+ENV G R
Sbjct: 77 ELSIILGGPPCQGFSSHRIKDAGVDDPRNKLLLRYFDFVAAFYP-KAFLVENVAGLFWER 135
Query: 112 SRDLITSMLTRAGFRFQEFL----LSPTQFGVPNSRTRYYLIAKR 152
+ +T L A + L+ +GVP +R R +++ R
Sbjct: 136 HKSYLTRFLDLANANNYRIVFCNTLNAKDYGVPQNRKRAFILGIR 180
>gi|358456224|ref|ZP_09166448.1| DNA-cytosine methyltransferase [Frankia sp. CN3]
gi|357080400|gb|EHI89835.1| DNA-cytosine methyltransferase [Frankia sp. CN3]
Length = 668
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
L VV +D ++ A ++H+F L ++EI ++ DV++ PPCQP
Sbjct: 81 GLRVVLGVDHDSEATETHRHHFSGLTLDEDLSDPAKVDEIAELIRSLRLDVVVGGPPCQP 140
Query: 66 FTRTGLQK-------DIADA----RCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
F+R G K +A+A R S+L A P C+L+ENV R
Sbjct: 141 FSRAGRSKIRHRARLGLAEAHDRRRDLWESFLAIVRHAKPG--CVLMENVPDMALDREMF 198
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ I L G+ Q L+ +++GVP R R + A
Sbjct: 199 IFRTIVHTLEGLGYSVQARLVDTSEYGVPQFRQRLIIAA 237
>gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
gi|197298046|gb|EDY32594.1| modification methylase HhaI [Ruminococcus lactaris ATCC 29176]
Length = 333
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
R++ + + V + + N VY NF P ++ ++E D++
Sbjct: 25 RIALESLGAKCVYSNEWNVPVQKVYADNFGDIPEGDIT-------QVDENTIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G Q+ D+R T L + + I + + +ENVK F + ++ +++
Sbjct: 78 GFPCQAFSISGKQRGFEDSRGT-LFFDVARIVKAKKPKVVFMENVKNFATHDHGKTLEVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ G+ F + +L+ +G+P R R Y++ R+
Sbjct: 137 KRTMETLGYTFYQKVLNAVDYGIPQKRERIYMVCFRN 173
>gi|420519467|ref|ZP_15017910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393126910|gb|EJC27356.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 318
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|385217822|ref|YP_005779298.1| Type II DNA modification enzyme [Helicobacter pylori F16]
gi|317177871|dbj|BAJ55660.1| Type II DNA modification enzyme [Helicobacter pylori F16]
Length = 319
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
I L AG+ +L+ F + R R Y++ R HS
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKHS 171
>gi|420475577|ref|ZP_14974247.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393092080|gb|EJB92704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 318
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|420463978|ref|ZP_14962754.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393079460|gb|EJB80193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 319
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|345867388|ref|ZP_08819400.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344048212|gb|EGV43824.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 425
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 20/208 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
L+ V +I+ A + N P+ N+ +IQ+FS E D++ PCQ F+
Sbjct: 96 GLKCVALNEIDKWACGTLRKNRPKWNVLEGDIQNFSFSEYTNKV-DIVTGGFPCQAFSYA 154
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G + + D R T + + C L ENVKG E ++ + + S+L G+
Sbjct: 155 GKKLGLNDTRGTLFYEFARAVNEVKPKIC-LGENVKGLLSHEKGKTLEGMISVLDEIGYN 213
Query: 127 FQEFLLSPTQ------FGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA 180
+++P Q + VP R R LI R + +ET L L K
Sbjct: 214 ----VVTPVQVLKAINYNVPQKRERIILIGVRKDIDLKYKYPLPYETIYNLTDALKKGDL 269
Query: 181 NTCNPLLSRMTLH-----GILDSTHPSG 203
CN S + + +LD P G
Sbjct: 270 FDCNVPKSEGSKYPQHKKNVLDLVPPKG 297
>gi|254671508|emb|CBA09095.1| site-specific DNA-methyltransferase [Neisseria meningitidis
alpha153]
Length = 258
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 7 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 66
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 67 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 126
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 127 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 186
Query: 180 ANTCNP 185
A NP
Sbjct: 187 AGESNP 192
>gi|209527695|ref|ZP_03276192.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|423064249|ref|ZP_17053039.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|209491867|gb|EDZ92225.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|406713492|gb|EKD08660.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 314
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ A +I A VY+ NF + + I + P+VI+ PPCQ F+
Sbjct: 21 GFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESVIHTLREYKPEVIIGGPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D + R I +I + ++ENV S++ + +L +G+
Sbjct: 81 G-KRDESLGRANLTINFARIIASIKP-RFFMMENVSRITKSQTLKVTWQILKNSGYGLTG 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP +R RY+LI +
Sbjct: 139 SVLDASYCGVPQARKRYFLIGE 160
>gi|414159048|ref|ZP_11415340.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869031|gb|EKS16995.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 315
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMS-PDVILM 59
RL + E + +I+ A + Y+ HN + + +I + S E + + D+I
Sbjct: 14 RLGMESAGHECIGFCEIDKFARASYRAIHN-TKGEIELHDITAVSDEFVRGIGRVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG + + + I
Sbjct: 73 GFPCQAFSIAGARRGFEDTRGT-LFFEIARFASILKPKYLFLENVKGLLNHDKGNTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 132 LSALDELGYDVEWQVLNSKNFGVPQNRERVFIIG 165
>gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451964513|ref|ZP_21917777.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451316633|dbj|GAC63139.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 403
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF-----PRTNLRGRNIQSFSI------EEINAM 52
L+ ++V AI+++ A+ Y HN +T + ++I I + I
Sbjct: 15 LAAFEVGIDVQAAIELDKQASDTYYHNLVEKLGAQTQVFSQDINDVDIGSMMKFQGIKQG 74
Query: 53 SPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFEGS 110
D++L PPCQ F+ + D AL LI + +L + L+ENV G
Sbjct: 75 QLDILLGGPPCQGFSSHRINDAGKDDPRNAL--LIRYFDFVKNLRPKVFLVENVPGLLWP 132
Query: 111 RSRDLITSM--LTRAG----FRFQEFLLSPTQFGVPNSRTRYYLIAKRS----------- 153
R + + + LTRA Q F+L+ +GVP SR R +++A R
Sbjct: 133 RHAEYLNNFVALTRAHDYQIVGDQPFILNARDYGVPQSRKRAFILAVRKDICTDGFEWPP 192
Query: 154 PAAHSSEASFCFETSSELMTELPK 177
A H+ S + TSS + P+
Sbjct: 193 KATHTKSGSRAWATSSTVFERPPQ 216
>gi|385219349|ref|YP_005780824.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|420432546|ref|ZP_14931559.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|420487753|ref|ZP_14986356.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420521631|ref|ZP_15020060.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|317014507|gb|ADU81943.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|393046636|gb|EJB47615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393101143|gb|EJC01715.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393126201|gb|EJC26652.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 318
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|334346028|ref|YP_004554580.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102650|gb|AEG50074.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 418
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF------SIEEINAMSPDVILMSPPC 63
E+ A++ + A Y+ NFP+T L +I F + D++ PPC
Sbjct: 21 GFEITVAVEWDKYACMTYRENFPKTPLFEGDIHDFLKPGSDHETKYKLKDLDLVFGGPPC 80
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSML 120
Q F++ G +D+ D R I I + L+ENV + RD I +
Sbjct: 81 QGFSQIG-PRDLLDDRNVLYREFARVIRKIKP-RMFLMENVPNLLLMQKGHFRDAIMAHF 138
Query: 121 TRAGFRFQEFL-LSPTQFGVPNSRTRYYLIAKR 152
+ G+ +L +S FGVP +R R + R
Sbjct: 139 SELGYSNTTYLKVSAADFGVPQTRERVFFFGTR 171
>gi|66391578|ref|YP_239103.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|62288666|gb|AAX78649.1| hypothetical protein RB43ORF127c [Enterobacteria phage RB43]
gi|406718867|emb|CCL97592.1| protein of unknown function [Enterobacteria phage RB43]
gi|415434135|emb|CCK73975.1| protein of unknown function [Enterobacteria phage RB43]
Length = 302
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 6 NHAF-SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ AF +E V +I+ A Y N+ NL G F+I+E D++L PCQ
Sbjct: 18 DRAFDGVECVLTAEIDKFAQQTYAANWGGDNLEG---DLFAIDENKVPDHDILLAGFPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F++ GL+ D R T ++ I A + L ENV + ++ I +L
Sbjct: 75 AFSKAGLKLGFDDVRGTVFFEILRIIRA-KKPRVLFFENVPELLTHDKGKTFKTIYGLLE 133
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLI 149
G+ L+ FG+P R R +++
Sbjct: 134 AEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|294678239|ref|YP_003578854.1| cytosine-specific DNA-methyltransferase [Rhodobacter capsulatus SB
1003]
gi|294477059|gb|ADE86447.1| site-specific DNA-methyltransferase (cytosine-specific)
[Rhodobacter capsulatus SB 1003]
Length = 451
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 14 VTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRT 69
V A ++N+ +Y+ NF P ++R E I+ + P D++ PCQPF++
Sbjct: 28 VFASELNSGLADLYEKNFGIRPHGDIR---------EAIDDVPPHDILCAGFPCQPFSKA 78
Query: 70 GLQKDIADARCTAL-SYLIETIPA-IPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G Q + L +Y++E + PS LL+ENV +G R+ I L G
Sbjct: 79 GEQLGFDCPQWGDLFNYVLEILDKHKPSY--LLIENVPNLLRHDGGRTWGKIKVRLEELG 136
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
+ + LSP FGVP R R ++ R+ H S
Sbjct: 137 YEVDKKKLSPFMFGVPQVRERAIIVGSRTGLRHFS 171
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFT 67
E+ AI+ + Y+ N P+T++ +I + +EI+ P DV++ PPCQ F+
Sbjct: 21 GFEIAIAIEHDKDIAYSYQRNHPQTDVYVDDICNLDFKEIHKKHPQIDVVMGGPPCQGFS 80
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS---RDLITSMLTRAG 124
+ G + I D R + + + +LENV + + R+ I G
Sbjct: 81 QKGKRLSINDPRNFLFKQFVRFVEEFKP-KYFVLENVPNIITTANGFFRNEINGAFNALG 139
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L FGVP R R I + S
Sbjct: 140 YEVCSGVLHAVDFGVPQDRRRAVFIGQLS 168
>gi|420465893|ref|ZP_14964657.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393080223|gb|EJB80951.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 321
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|420474540|ref|ZP_14973215.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393088711|gb|EJB89356.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 318
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKNLKH 170
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 8 AFSLEV---VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMS 60
F LE V +++ + Y++NFP L ++IQ S E IN + DVI+
Sbjct: 18 GFDLEGFKNVFSVEYDRQTAQTYRYNFPNHVLINKDIQEISTNEIKKIINNNTVDVIIGG 77
Query: 61 PPCQPFTRTGL--QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRD 114
PPCQ F+ G + I D R + + +I + ++ENV +G R+
Sbjct: 78 PPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFV-SILKPKIFIIENVARLVSHNKGKTIRE 136
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
+ S + + G++ + +L + + +P R R +++ ++ + E T E +++
Sbjct: 137 IQDS-IKKLGYQVKYEILQTSDYNIPQKRQRVFIVGYKNIEFNYPEKLKRKVTIKEAISD 195
Query: 175 LPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSD 213
LP L + + + + + H LY+ +SD
Sbjct: 196 LPPLNSGEKSKIPNHFAM------KHSQEMLYKMSFISD 228
>gi|417924522|ref|ZP_12567961.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
gi|342835741|gb|EGU69971.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
Length = 337
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 53 SPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGF---- 107
S D+++ PPCQ F+ G +K+ D R + IE I + P++ L ENV+GF
Sbjct: 23 SVDLVVGGPPCQGFSMAGKRKN-DDIRNQLMHSYIEFIKLVQPTM--LFFENVQGFTVGF 79
Query: 108 ----EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ + D++ S L G+ +++ +++GVP +R R+ L A ++ A
Sbjct: 80 KDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKRFILFASKNGA 131
>gi|269123998|ref|YP_003306575.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268315324|gb|ACZ01698.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 438
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
S E V + +I A Y F + G +I+ S+++I D +L PCQPF+
Sbjct: 41 GISTECVFSSEIKKHAILSYTKYFGDYKIHG-DIKEISVDDIPDF--DFLLAGFPCQPFS 97
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G + D R T L + IE I LLENV+G + ++ + I + L G
Sbjct: 98 SAGNRLGFNDTRGT-LFFEIERILKNKKPYGFLLENVEGLINHDNGKTLETILNSLNSLG 156
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ +L +FG+ SR R Y++ +
Sbjct: 157 YKVNYKVLDSIEFGLAQSRKRIYIVGTKD 185
>gi|440753140|ref|ZP_20932343.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
gi|440177633|gb|ELP56906.1| modification methylase HhaI [Microcystis aeruginosa TAIHU98]
Length = 331
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A S+Y+ NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQSIYQANF------GDKPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ +I L +
Sbjct: 91 CGNLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|127440|sp|P24600.1|MTD1_HERAU RecName: Full=Modification methylase HgiDI; Short=M.HgiDI; AltName:
Full=Cytosine-specific methyltransferase HgiDI
gi|43482|emb|CAA38938.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 309
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
E+V A+D A + Y+ NF P L I + ++ I SP++I+ PPCQ F+
Sbjct: 21 GFEIVAAVDNWRPAINTYQQNFTHPIHELDLAQIDA-AVSLIKTHSPELIIGGPPCQDFS 79
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRF 127
G ++D R + + AI +++ENV+ S+ SML G+
Sbjct: 80 SAG-KRDEGLGRANLTLDFAKIVLAIQP-AWVIMENVERARLSKIHQQACSMLGDEGYSL 137
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +L + GVP R R ++I R
Sbjct: 138 AQVVLDASLCGVPQLRKRTFVIGHR 162
>gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina
MBIC11017]
Length = 382
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLR-----GRNIQSFSIEEINAMSPDVILMSPPCQPF 66
+++ ID N A + NFP+ L+ R+I++ I+ D+++ PPCQ F
Sbjct: 21 KILGGIDNNPHAVKTHHQNFPKCKLKLDATDIRDIENLEDLGIDPKEVDILIGGPPCQVF 80
Query: 67 TRTG-------LQKDI-ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS-RDLIT 117
+R G L+++I D R I + L ++ENV + + I
Sbjct: 81 SRVGIGKMKNHLKRNIEQDPRNFLYKEYIRFLRYYKPL-FFIIENVDNLANKKDILETII 139
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
L G+R + +L + FGVP R R ++I R
Sbjct: 140 KELEACGYRVEYNVLDASDFGVPQRRLRIFIIGSR 174
>gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6]
Length = 380
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
RL + + + +I+ A YK HN + + +I + S E I + S D+I
Sbjct: 14 RLGMESAGHKCIGFCEIDKFARESYKAIHN-TKGEIELHDITAVSDESIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENV+G +G + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVRGLLNHDGGATFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
L G+ + +L+ FGVP +R R ++I S F ++ ++
Sbjct: 132 IRTLDELGYDVEWQVLNSKNFGVPQNRERVFIIGHLR--GTSGRKVFPLSGENQSISSQS 189
Query: 177 KLKANTCNP 185
+K NP
Sbjct: 190 VMKIGNVNP 198
>gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession
Number M24625 [Neisseria meningitidis]
Length = 276
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|423284632|ref|ZP_17263515.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
gi|404579823|gb|EKA84536.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis HMW 615]
Length = 343
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ ++ +E V + D + A Y+ NF P +++ ++ E + S D++
Sbjct: 18 RLAMNSSQVECVFSSDNDKFAQQTYEANFHEVPTGDIK-------AVNEKDIPSFDILTA 70
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G ++ D L + + I + LENVKG + ++ +
Sbjct: 71 GFPCQPFSYAGEKQGFNDEVRGTLFFDVCRILEYHKPPMVFLENVKGLKSHDNGKTLQTV 130
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L + G+ +LS +G+P R R+Y +A R+
Sbjct: 131 LDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRT 167
>gi|425446969|ref|ZP_18826964.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
gi|389732590|emb|CCI03507.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9443]
Length = 331
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYHANF------GDQPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ ++I + L +
Sbjct: 91 CGDLKGFDDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLEVILNTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YIDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
Length = 434
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +++++ +++K NFP + ++++ + EI S DV+ PPC
Sbjct: 26 GFDVLVSVELDPIHCAIHKFNFPFWKVLCKSVEETTGSEIRNSSDIGNQEIDVVFGGPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G ++ I D R T + I + + +LENVKG + ++ T ++ +
Sbjct: 86 QGFSLIG-KRSIDDPRNTLGFHFIRLVLEL-QPNFFVLENVKGMTVGKHKEFTTEIIDKF 143
Query: 123 --AGFRFQE--FLLSPTQFGVPNSRTRYYLIAKRS 153
G++ LL+ +GVP +R R +L+ R
Sbjct: 144 ENNGYKVNRNYQLLNAANYGVPQNRERLFLLGCRQ 178
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ A++I+ + +++NFP + R+I + EI S DV+ PPC
Sbjct: 30 GFDVLAAVEIDPIHCATHEYNFPFWTVLCRDITKITGAEIRNQSAIGDRDIDVVFGGPPC 89
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G ++ + D R + + + + + + ++ENV+G + + ++ +++
Sbjct: 90 QGFSLIG-KRVVDDPRNSLVFQFLRVVLELKP-KFFVMENVRGLAVGKQQKILETLIQEF 147
Query: 123 --AGFRFQE--FLLSPTQFGVPNSRTRYYLIAKRS 153
G++ Q+ +L+ +GVP +R R +L+ R
Sbjct: 148 QLQGYQVQKNYQVLNAACYGVPQARERLFLLGARE 182
>gi|300813374|ref|ZP_07093725.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512517|gb|EFK39666.1| Modification methylase HpaII [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 347
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 6 NHAFS--LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS----IEEINAMSPDVILM 59
+ AF +E V + + A Y NF G + F I+EI+ D++L
Sbjct: 19 DQAFGNDIETVFVSEWDKKAQETYIANF------GEKPKIFGDITKIDEIDIPIHDILLA 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G +K D R T L + + I + + ENVK + ++ +I
Sbjct: 73 GFPCQAFSLAGQKKGFEDTRGT-LFFDVARIVEFHKPKVVFCENVKNLVNHDRGKTFKII 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L G+R +++ FGVP +R R Y++A R
Sbjct: 132 KKTLNDLGYRVFYKVINSKDFGVPQNRERIYIVAFRE 168
>gi|302559403|ref|ZP_07311745.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000]
gi|302477021|gb|EFL40114.1| modification methylase NaeI [Streptomyces griseoflavus Tu4000]
Length = 429
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQ---SFSIEE---INAMSPDVILMSPPC 63
E A++++ +A + + N P ++ ++ +++ E+ +N D++ PC
Sbjct: 24 GFEHALAVELDANAAATLRRNRPAWHVVEGDVADPGTWTPEDYRTVNGEQLDLLAGGVPC 83
Query: 64 QPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLIT 117
PFT G Q D R A++ P + LLLENV+G +R R +
Sbjct: 84 PPFTIAGKQLGATDERDLFAWAVNLAERVRP-----KALLLENVRGLSANRFAAYRQNVL 138
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L AG+ Q LL + FGVP R R+ L+A
Sbjct: 139 DTLQSAGYAAQWKLLHASDFGVPQLRPRFVLVA 171
>gi|385227307|ref|YP_005787231.1| type II DNA modification enzyme [Helicobacter pylori SNT49]
gi|344332220|gb|AEN17250.1| type II DNA modification enzyme [Helicobacter pylori SNT49]
Length = 312
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSP 61
RL L+ V +IN A Y+ F T RN N + D ++
Sbjct: 11 RLGLEQCHLKCVGHAEINHEALRTYELFFKDT----RNFGDLMRINPNDLPDFDALISGF 66
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITS 118
PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 67 PCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQETFKTIIK 125
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 126 ALQEAGYTIYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|298735876|ref|YP_003728401.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|298355065|emb|CBI65937.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 312
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D+++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DMLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ T F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSTDFQLAQKRERLYIVGFRKDLKH 164
>gi|420414314|ref|ZP_14913434.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419419|ref|ZP_14918509.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026648|gb|EJB27745.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031325|gb|EJB32397.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 317
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 13/178 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
S E+V A D + A YK N + + G +E+ + D+++ PCQPF+
Sbjct: 21 SFEIVWANDFDKYAVETYKANIGQNIVLG----DIEVEKDHICGHDILIGGFPCQPFSTL 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G + D R T + E I + ++LENVK S I L ++
Sbjct: 77 GSLQGFEDKRGTLFFTICEIIKKYRP-KIVVLENVKNLINHNKGESFKRILFELNELDYQ 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF-----CFETSSELMTELPKLK 179
+L+ FG+P R R +++A R + + E F C ++ +L+ + +LK
Sbjct: 136 VNYDILNTLDFGIPQQRNRVFIVALRKNSFTNLEFIFPAKISCKMSALDLLDKQVELK 193
>gi|422878164|ref|ZP_16924630.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
Length = 329
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------- 107
D+++ PPCQ F+ G +++ D R + +E I + + L ENV+GF
Sbjct: 95 DLVVGGPPCQGFSMAGKRQN-DDVRNQLMHSYVEIIKLVQP-KMLFFENVQGFTVDFKDH 152
Query: 108 -EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ +++ S L R G++ +++ + FG+P +R R+ L A ++
Sbjct: 153 KDKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKRFILFASKNETYEIFFEELFNN 212
Query: 167 TSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSG---DLYRRYLVSDKDLLRR 219
L K+ + HG +DS G Y R + S + L+RR
Sbjct: 213 RDFFLKNRGLKIPVTVSQAINDLKNSHGEIDSKDTKGFKNGKYGRMISSYQKLMRR 268
>gi|448343463|ref|ZP_21532402.1| DNA-cytosine methyltransferase [Natrinema gari JCM 14663]
gi|445623525|gb|ELY76931.1| DNA-cytosine methyltransferase [Natrinema gari JCM 14663]
Length = 668
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 38/192 (19%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS--------PDVILMSPPC 63
++ AIDI+T A + Y+ N P + RN+ + E+N + PD+++ PPC
Sbjct: 260 DIRWAIDIDTDAVATYRLNHP--EIPHRNVVCGDVREVNLTARIQESVSEPDLLVGGPPC 317
Query: 64 QPFTRTGLQKD---------IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGS---- 110
Q ++ G + + D R T + ++ + + + +++ENV+G
Sbjct: 318 QSLSKAGYRSRRGDDEDYSILDDDRTTLYTQYVKAVEEL-RPKAIVMENVEGMVNEVGDT 376
Query: 111 --RSRDLITSML-----TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
R D + L T G+ + L T+ G+P R R LI R S+
Sbjct: 377 DIRVIDWVIEDLEMLSETGPGYDVEYKLQDMTELGIPQKRERVLLIGIRDDLTESA---- 432
Query: 164 CFETSSELMTEL 175
T+ +L+ EL
Sbjct: 433 ---TADDLLNEL 441
>gi|420437668|ref|ZP_14936650.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393052259|gb|EJB53208.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 319
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I I +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKIKQPECFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + +R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQNRERLYIVGFRKDLKH 170
>gi|355575377|ref|ZP_09044915.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817687|gb|EHF02186.1| hypothetical protein HMPREF1008_00892 [Olsenella sp. oral taxon 809
str. F0356]
Length = 295
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-INAMSPDVILMSPPCQPFTR 68
+VV A D +A +Y+ NF + R++ + I + + PDVI+ PPCQ ++
Sbjct: 21 GFDVVAAFDNWDAAIRIYEANFDHPIYK-RDLSTDDITPMVRELKPDVIVGGPPCQDYSI 79
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
G ++ I + + Y I P+ ++ ENV E + + L AG+
Sbjct: 80 AG-KRQIGERANLTVKYAELVIDIKPTW--VVFENVYNIERFPTLPKMEQKLRDAGYGIT 136
Query: 129 EFLLSPTQFGVPNSRTRYYLIAK 151
+L ++ GVP R R++LI K
Sbjct: 137 THVLDASRCGVPQKRRRFFLIGK 159
>gi|442555664|ref|YP_007365489.1| cytosine-C5 specific DNA methylase [Lawsonia intracellularis N343]
gi|441493111|gb|AGC49805.1| cytosine-C5 specific DNA methylase [Lawsonia intracellularis N343]
Length = 348
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
V+ A DI +N V+ NF T + ++I E ++++ PCQ F+ G +
Sbjct: 48 VIFANDIMAQSNVVWSSNFTGT-FQLKSIADLLNENFQFPKANLVIGGFPCQDFSVAGKR 106
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKG-FEGSRSRDLITSMLTRAGFRFQEFL 131
+ + R + + E I + S + + ENV G F R+ ITS + G+ FL
Sbjct: 107 EGLKTQRGSLYHCMTEVIQQV-SPEAFIAENVYGLFYIPGVREKITSDFEQIGYTVFSFL 165
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPA 155
L ++GVP R R + I ++ A
Sbjct: 166 LFSNEYGVPQIRRRVFFIGLKTEA 189
>gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 394
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D+++ PCQ F+ G++K + D R AL Y + + L ENVKGF + +
Sbjct: 66 DLLVGGSPCQSFSVAGIRKGVNDPR-GALIYQFYRVVDEARPKVFLFENVKGFRSIDKGQ 124
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
+R+ G+ +L+ +G+P +R RY+L+ +S A
Sbjct: 125 TREEFERAFRLLGYTVHSAVLNTKHYGLPQNRERYFLVGFKSKTA 169
>gi|421543479|ref|ZP_15989571.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|421545540|ref|ZP_15991600.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|421547595|ref|ZP_15993627.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|421551817|ref|ZP_15997800.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|402325768|gb|EJU61175.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|402326590|gb|EJU61990.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|402327615|gb|EJU63002.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|402333157|gb|EJU68469.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
Length = 326
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|170718974|ref|YP_001784137.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168827103|gb|ACA32474.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 323
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV+L PCQ F+ G +K D R + L++ I A+ + +LENVKG +
Sbjct: 69 DVMLAGFPCQTFSIVGKRKGFEDERGQIIYSLVD-ILALKQIPYFILENVKGLVNHNKGE 127
Query: 115 LITS---MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS 158
I S +L G+ +L +GVP R R Y + R H
Sbjct: 128 TINSIVKLLEETGYDVYYQVLDSQFYGVPQMRERVYFVGIRKDIKHK 174
>gi|157414453|ref|YP_001481709.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283955585|ref|ZP_06373079.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
gi|157385417|gb|ABV51732.1| hypothetical protein C8J_0133 [Campylobacter jejuni subsp. jejuni
81116]
gi|283792928|gb|EFC31703.1| hypothetical protein C1336_000030018 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 321
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I E N +++L PCQ F+ G +K D R T L + + I + + LENV
Sbjct: 62 QINENNIPKHNILLAGFPCQAFSIAGHRKGFNDIRGT-LFFDVARIVKKHKPEIVFLENV 120
Query: 105 KGFEG---SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
KGF+ ++ ++ + L G+ +L+ FG+P +R R Y++A
Sbjct: 121 KGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVA 169
>gi|314055098|ref|YP_004063436.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2]
gi|313574989|emb|CBI70002.1| cytosine-specific methyltransferase [Ostreococcus tauri virus 2]
Length = 315
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 38/220 (17%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E V A D + S+ +Y +N T + G ++ +E+I D++ PCQPF+ G
Sbjct: 26 ECVFANDFDKSSKEIYTNNHDSTFVLG-DLNDILVEDI--PEHDLLCGGFPCQPFSIAGD 82
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQ 128
+K D R ++E + Q ++LENVK + + +I L G+ +
Sbjct: 83 RKGFEDTRSNVFWKIVEILKH-HKPQNIILENVKNLTSHDNGNTFKIIKKSLEDCGYHIK 141
Query: 129 EFLLSPTQF-GVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLL 187
+L ++ VP R R Y++ R H +F F+ + K N C+
Sbjct: 142 YSILDTSKISSVPQHRERIYIVGFRDKELHD---NFNFDF-------VEGDKGNLCD--- 188
Query: 188 SRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVN 227
++S P +Y SDK + VFD++N
Sbjct: 189 -------FMESCVPD-----KYYYSDK-----YKVFDMIN 211
>gi|16125285|ref|NP_419849.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15]
gi|221234022|ref|YP_002516458.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
gi|13422327|gb|AAK23017.1| C-5 cytosine-specific DNA methylase [Caulobacter crescentus CB15]
gi|220963194|gb|ACL94550.1| DNA-cytosine methyltransferase [Caulobacter crescentus NA1000]
Length = 335
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNL-RGRNIQSFSIEEINAM-----SPDVILMSPPC 63
EV A+D + Y N P + R +++ +I++I+ + SP ++ PPC
Sbjct: 21 GFEVGLALDRKLDSVKSYNLNRPSAAVARVKDLSEITIQDIDDLYGKEFSPSGVIGGPPC 80
Query: 64 QPFTRTGLQKDIADARCT---ALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLIT 117
Q F++ + + I D R A + L+ + + L ++ENV G + + + +
Sbjct: 81 QSFSQANVNQKIDDVRTALPMAYARLVAALHSRSPLDFFVMENVVGLVRQKHVATLERVE 140
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L AGF+ LL+ G P +R R +L+
Sbjct: 141 RELEAAGFKVARLLLNAKDHGTPQNRPRLFLLG 173
>gi|434398887|ref|YP_007132891.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428269984|gb|AFZ35925.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 359
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDV--ILMSPPCQPFT 67
+++ A D + Y++N P+T L R+I+ +I PD I+ PPCQ ++
Sbjct: 30 GFKIIWANDCDKEIWQTYQYNHPKTYLDRRDIRVIPSGDI----PDCFGIIGGPPCQSWS 85
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCL--LLENVKGF---EGSRSRDLITSMLTR 122
G Q+ I D+R +E I + Q L L ENV G + + I +
Sbjct: 86 EAGSQRGIQDSRG---QLFLEYIRILEDKQPLFFLAENVSGMLHKQHGLALQQIINAFEE 142
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
AGF LL+ + VP R R + R+
Sbjct: 143 AGFLVNYSLLNAVDYNVPQDRKRIIFVGFRA 173
>gi|420482727|ref|ZP_14981361.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420513051|ref|ZP_15011533.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393097331|gb|EJB97924.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393156466|gb|EJC56730.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 319
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G ++ I + DV++ P
Sbjct: 17 RLGLERYHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 133 LQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRK 166
>gi|210135280|ref|YP_002301719.1| type II R-M system methyltransferase [Helicobacter pylori P12]
gi|210133248|gb|ACJ08239.1| type II R-M system methyltransferase [Helicobacter pylori P12]
Length = 315
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR- 113
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG +
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHNKKA 118
Query: 114 --DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
++I L AG+ +L+ F + +R R Y++ R H
Sbjct: 119 TFNIIIKALQEAGYTTYYQILNSADFQLAQNRERIYIVGFRKDLKH 164
>gi|420442516|ref|ZP_14941451.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393057562|gb|EJB58462.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 318
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G I + DV++ P
Sbjct: 17 RLGLERYHLKCVGHAEINHEALRTYELFFKDTHNFG---DLMRINPNDLPDFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 133 LQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRK 166
>gi|443657878|ref|ZP_21131993.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159029640|emb|CAO87718.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333088|gb|ELS47664.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 306
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY +NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 24 IVAAFDNWIPAIDVYSNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D R E + + + Q ++ENV E S+ + G+ E
Sbjct: 81 G-KRDEGLGRANLTLTFAEIVTRL-TPQWFVMENVARIEKSKILIQAKQIFKSHGYGLTE 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY++I K
Sbjct: 139 KVINSCYCGVPQTRKRYFMIGK 160
>gi|386756120|ref|YP_006229337.1| type II DNA modification enzyme [Helicobacter pylori PeCan18]
gi|384562378|gb|AFI02844.1| type II DNA modification enzyme [Helicobacter pylori PeCan18]
Length = 312
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + L+ V +IN A Y+ F T+ G I + DV++ P
Sbjct: 11 RLGLERYHLKCVGHAEINDEALRTYELFFKGTHNFG---DLMRINPNDLPDFDVLVSGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 127 LQEAGYTTHYQILNSADFQLAQKRERLYIVGFRK 160
>gi|290969050|ref|ZP_06560585.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781006|gb|EFD93599.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 333
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 7 HAFSLEVVTAI--DINTSANSVYKHNFPRTNLRGRNIQSF----SIEEINAMSPDVILMS 60
AF E+ T + N + Y NF G I F +I+E N D++L
Sbjct: 20 QAFGAEMTTVFTSEWNKKSQETYLANF------GEEIHIFGDITAIDERNIPPHDILLAG 73
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQ F+ G ++ D R T L + + I + + ENVK + ++ +I
Sbjct: 74 FPCQAFSLAGKKRGFEDTRGT-LFFDVARIVNYHKPKVVFCENVKNLVNHDRGKTFKIIN 132
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
L G+ +L+ FGVP +R R Y++A R A
Sbjct: 133 QTLQDLGYTVFHNVLNSKDFGVPQNRERIYIVAFREDIA 171
>gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
Length = 255
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMS-PDVILM 59
R+ + E + +I+ A + YK H+ + + +I + S + I + DVI
Sbjct: 14 RIGMESAGHECIGFCEIDKFARASYKAIHD-TKGEIELHDITTVSDDTIRGIGHVDVICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG + + ++I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILKPRYLFLENVKGLLNHDRGNTFEVI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
S L G+ + +L+ FGVP +R R ++I + F ++ P
Sbjct: 132 LSALDELGYDVEWQVLNSKDFGVPQNRERVFIIG--HSRKRGTRRVFPIGRANREFDFEP 189
Query: 177 KLK--ANTCNP 185
K+K NT NP
Sbjct: 190 KIKIVGNTKNP 200
>gi|376006902|ref|ZP_09784110.1| Modification methylase HindV [Arthrospira sp. PCC 8005]
gi|375324711|emb|CCE19863.1| Modification methylase HindV [Arthrospira sp. PCC 8005]
Length = 314
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ A +I A VY+ NF + + I + P+VI+ PPCQ F+
Sbjct: 21 GFDIKAAFEIWQPAIKVYQRNFRHPIFQVDLSEESVIHTLRECKPEVIIGGPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G ++D + R I +I + ++ENV S++ + +L +G+
Sbjct: 81 G-KRDESLGRANLTINFARIIASIKP-RFFMMENVSRITKSQTLKVTWQILKNSGYGLTG 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+L + GVP +R RY+LI +
Sbjct: 139 SVLDASYCGVPQARKRYFLIGE 160
>gi|420453880|ref|ZP_14952714.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393068353|gb|EJB69155.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
Length = 318
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
I L AG+ +L+ T F + R R Y++ R
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSTDFQLAQKRERLYIVGFRK 166
>gi|390456269|ref|ZP_10241797.1| cytosine-specific methyltransferase [Paenibacillus peoriae KCTC
3763]
Length = 379
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTR 68
+ +V + +++ A + Y+ N P + L +I++ + E+ A D+I PPCQ F+
Sbjct: 24 GVNIVWSNELDKDACNTYEANHPESTLFRGDIRN-AFNELEAYKGTDIIFGGPPCQGFSV 82
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG-SRSRDLITSMLTRA---G 124
G + D D R T + ++ + I + +LENV + +D+ T M A G
Sbjct: 83 AG-KMDPNDERSTLIWTYLDVVRIIKP-KAFVLENVSALAKLEKWKDVRTKMFQIANEMG 140
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ FLL+ + +GVP R R + I
Sbjct: 141 YSCYPFLLNSSNYGVPQKRERVFFIG 166
>gi|421722004|ref|ZP_16161274.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
gi|407223589|gb|EKE93375.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
Length = 312
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ T F + +R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSTDFQLAQNRERLYIVGFRKDLKH 164
>gi|294155594|ref|YP_003559978.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600134|gb|ADE19630.1| cytosine-specific DNA modification methyltransferase [Mycoplasma
crocodyli MP145]
Length = 388
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 9 FSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQS-FSIEEINAM---SPDVILMSPPCQ 64
F E V + +I+ + Y +NF NI S F I ++N D++ PCQ
Sbjct: 25 FGGECVFSSEIDKYCINTYFNNF--------NISSDFDITKVNVNEIPKHDLLCAGFPCQ 76
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F++ G QK + D R T L + I+ I + ++LENV+ + + ++I + L
Sbjct: 77 AFSKAGKQKGLLDTRGT-LFFEIQRILEFHKTKYIILENVRNLVSHDNGNTWNVIHNNLN 135
Query: 122 RAGFRF--QEFLLSPTQFGVPNSRTRYYLIAK 151
+ G+R + LLSP +P R R ++I K
Sbjct: 136 KLGYRTTSKPLLLSPHNLKIPQLRERVFIIGK 167
>gi|111607698|gb|ABH10736.1| DNA methyltransferase [Flavobacterium sp. 4H]
Length = 408
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 32/214 (14%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + V + N A Y+ NF P ++ +++ E+ D++
Sbjct: 108 RLALQNVGGKCVFTSEWNNEAQKTYRENFGEVPFGDITKERNKNYIPEKF-----DILCA 162
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDL 115
PCQ F+ G QK AD R T L + IE I + + LENVK G+ + +
Sbjct: 163 GFPCQAFSIAGYQKGFADTRGT-LFFDIEQIVEKHKPKVVFLENVKNLVSHDNGNTFKTI 221
Query: 116 ITSMLTRAGFR-FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
I ++ + G++ F + L S T VP +R R +++A P + + F E
Sbjct: 222 IETLELKLGYKTFAKVLNSATHANVPQNRERIFIVA-FDPKQVKNYSKF----------E 270
Query: 175 LPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRR 208
PK P+ T+H LD Y +
Sbjct: 271 FPK-------PIKLTKTIHDFLDKEKQDDIFYYK 297
>gi|421715315|ref|ZP_16154632.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407215071|gb|EKE84911.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 313
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALVSGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLISHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
+I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKIIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|421539258|ref|ZP_15985420.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
gi|402321838|gb|EJU57309.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
Length = 333
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|425468721|ref|ZP_18847714.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
gi|389884620|emb|CCI35097.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9701]
Length = 331
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V + DI+ A S+Y NF PR ++ I ++ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDARSIYHANFGDQPRGDIT-------EIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ +I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALHFGLPQKRERIFIVGFR 176
>gi|327399867|ref|YP_004346898.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
gi|327182537|gb|AEA32972.1| cytosine-specific methyltransferase [Lactobacillus amylovorus GRL
1112]
Length = 401
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD--VILMSPPCQPFTRTG 70
VV A + + +A Y N P T L GR+I +EI PD VI+ PCQ F+ G
Sbjct: 34 VVYANEFDKNARKTYAENNPETPLDGRDIHDVKSDEI----PDSNVIMGGFPCQAFSIAG 89
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRF 127
+K D R L+ I A + + +ENVK + + +I L +
Sbjct: 90 YRKGFEDDRGDLFFELLRMINA-KRPRVIFIENVKNLVSHDHGNTFKVIREALVENDYYI 148
Query: 128 QEFLLSPTQFG-VPNSRTRYYLIA 150
+ +L+ +G +P +R R Y++
Sbjct: 149 KWKVLNGKDYGNIPQNRERIYVVG 172
>gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 342
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNI----QSFSIEEINAMSPDVILMSPPCQP 65
+V+ IDI A ++HN T ++ F + N + DVI+ PPCQ
Sbjct: 24 GFDVLFGIDIWDIAIETFQHNHKNTEGILADLTELDDDFFKQYTNKV--DVIIAGPPCQG 81
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------EGSRSRDLITSM 119
F+ G ++++ D R ++ + I + + +++ENV G +G + LI S
Sbjct: 82 FSMCG-KREVGDKRNELFQEVVRAVKII-NPKIVIIENVVGLLSMENVDGEDVKGLIVSE 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ G+ +L ++ GVP R R I R
Sbjct: 140 FEKLGYETNYKILDASEHGVPQKRKRVIFIGSR 172
>gi|189350232|ref|YP_001945860.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC
17616]
gi|189334254|dbj|BAG43324.1| DNA (cytosine-5-)-methyltransferase [Burkholderia multivorans ATCC
17616]
Length = 380
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H +I +V H++P G ++ +F +E + D+++ PCQ F
Sbjct: 20 HPLGWRTAFVSEIEPFPCAVLAHHYPSVPNLG-DMTNF--KEWPDAAIDLLVGGTPCQSF 76
Query: 67 TRTGLQKDIADARCT-ALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTR 122
+ GL+K +AD R L+YL P + L+ ENV G G R L
Sbjct: 77 SVAGLRKGLADPRGNLMLTYLAIAQRYAP--RWLVWENVPGVLSSNGGRDFGTFLGGLAE 134
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
G+ F +L FG+P R R +++A+ S A+ FE SS ++ LP
Sbjct: 135 LGYGFAYRVLDAQYFGIPQQRRRVFVVARL--GDWRSAAAVLFEHSS--LSGLP 184
>gi|399992138|ref|YP_006572378.1| modification methylase NaeI [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400753815|ref|YP_006562183.1| modification methylase NaeI [Phaeobacter gallaeciensis 2.10]
gi|398652968|gb|AFO86938.1| modification methylase NaeI [Phaeobacter gallaeciensis 2.10]
gi|398656693|gb|AFO90659.1| modification methylase NaeI [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 324
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 17 IDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
++I+ + +HN P+ N+ ++++F E D++ PC PF+ G Q
Sbjct: 29 VEIDKHCCATLRHNRPQWNVLEEDVRAFKEEADAYHGIDLLAGGLPCPPFSVAGKQLGEK 88
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGFEGS---RSRDLITSMLTRAGFRFQEFLLS 133
D R IE + A + +++ENV+GF + R+ + + L + G+ LL+
Sbjct: 89 DER-NLFDDAIEIVAAT-RPRAVMIENVRGFLDAVFHDYREKLKTQLAKLGYETDWRLLN 146
Query: 134 PTQFGVPNSRTRYYLIAKRS 153
+ +GVP R R ++A R
Sbjct: 147 ASDYGVPQLRPRVAIVALRK 166
>gi|188581100|ref|YP_001924545.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
gi|179344598|gb|ACB80010.1| DNA-cytosine methyltransferase [Methylobacterium populi BJ001]
Length = 446
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN---AMSP----DVILMSPP 62
+V A +I+ +V+K NFP + R++ + EI A+ P DV+ PP
Sbjct: 24 GFDVRAAAEIDPVHAAVHKFNFPNCAVLARSVVGLTAAEIREAAALGPSDRVDVVFGGPP 83
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
CQ F+ G + + D R + + + + L ENVKG + R + ++T
Sbjct: 84 CQGFSMIG-HRVLDDPRNRLVHEFVRLVHEL-DANYFLFENVKGLTVGKHRAFLDELVT- 140
Query: 123 AGFRFQEF-------LLSPTQFGVPNSRTRYYLIAKR 152
FR + +L FGVP R R L+ R
Sbjct: 141 -AFRNVGYDVALPWQVLDAADFGVPQHRERLILLGAR 176
>gi|335044409|ref|ZP_08537434.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
gi|333787655|gb|EGL53539.1| site-specific DNA methylase [Methylophaga aminisulfidivorans MP]
Length = 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQPF+ GL+ I D R T L + I I + LLENVKG +
Sbjct: 157 DVLLAGFPCQPFSHAGLKLGIEDTRGT-LFHDIANILETKKPKFALLENVKGLISHDKGY 215
Query: 112 SRDLITSMLTRAGFR-------------------FQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +I LT+ G+ +E +L FG+P +R R Y++ R
Sbjct: 216 TLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVLWR 275
Query: 153 SPAAHSSE 160
S E
Sbjct: 276 DGEVKSFE 283
>gi|345515584|ref|ZP_08795085.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|423309031|ref|ZP_17287021.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|229436216|gb|EEO46293.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|392685770|gb|EIY79081.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 374
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIP-----AIPSLQCLLLENVKGFE- 108
DV PCQPF+ GL++ D R T + + IP + L LENVKG +
Sbjct: 82 DVCCGGFPCQPFSIAGLRRGFEDTRGTLFFNIANIVKQKIDSGIPP-KVLFLENVKGLKT 140
Query: 109 --GSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK----------RSPAA 156
+ I + L G+ + +L+ FGVP +R R +++A + P
Sbjct: 141 HMKGETLKTILATLDELGYAYNYDVLNAKYFGVPQNRERLFIVAWYKDIVKATTFKFPYG 200
Query: 157 HSSEASFCFETSSELMTELPKLKA 180
+ + S +E S +L ++ K K
Sbjct: 201 IAPDGSTIYEKSKDLGDKVIKTKV 224
>gi|172038109|ref|YP_001804610.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|354556456|ref|ZP_08975751.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171699563|gb|ACB52544.1| putative modification methylase [Cyanothece sp. ATCC 51142]
gi|353551668|gb|EHC21069.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 344
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + V + DI+ A Y+ NF + +G +I IE I D++L P
Sbjct: 40 RLKDKKIESICVFSSDIDPDAKKNYEANF-KEKPQG-DITKIPIESIPKH--DLLLAGFP 95
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSM 119
CQPF+ G + D R T L + I I +LENVK G ++ I +
Sbjct: 96 CQPFSICGKLEGFEDTRGT-LFFEIARILDYHKPYAFILENVKQLVGHNKGKTLKTILKI 154
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
L+ G+ +L+ FG+P R R +++ R P A F ++ + LM L ++
Sbjct: 155 LSDLGYYTDYKVLNALNFGLPQKRERVFIVGFRDPLA------FIWKQPNILMKPLSEI 207
>gi|429460710|gb|AFZ85150.1| type II restriction-modification system methylation subunit [Vibrio
cholerae]
Length = 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQPF+ GL+ I D R T L + I I + LLENVKG +
Sbjct: 157 DVLLAGFPCQPFSHAGLKLGIEDTRGT-LFHDIANILETKKPKFALLENVKGLISHDKGY 215
Query: 112 SRDLITSMLTRAGFR-------------------FQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +I LT+ G+ +E +L FG+P +R R Y++ R
Sbjct: 216 TLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVLWR 275
Query: 153 SPAAHSSE 160
S E
Sbjct: 276 DGEVKSFE 283
>gi|385220926|ref|YP_005782398.1| type II DNA modification enzyme [Helicobacter pylori India7]
gi|317009733|gb|ADU80313.1| type II DNA modification enzyme [Helicobacter pylori India7]
Length = 318
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + Y I I + +C LLENVKG + ++
Sbjct: 66 DVLISGFPCQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYKILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
Length = 342
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTR 68
++ A+D + + HNF + + +N+ + +N + D+I+ PPCQ F+
Sbjct: 22 GFKIQVAVDKEEAFLKTFSHNFKDS--QTKNLDLGDSKTLNDIPKSDIIIAGPPCQGFSI 79
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGF 125
TG ++I D R + ET+ + + + ++ENV+G + ++ ++ + AG+
Sbjct: 80 TG-PRNIDDPRNKLYLSVFETL-KLTNPKAFVVENVRGLKTMWGGNVFKEIIKKFESAGY 137
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
E LL+ +GVP R R +++
Sbjct: 138 IVTESLLNSADYGVPQIRHRVFIVG 162
>gi|166367724|ref|YP_001659997.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|425464491|ref|ZP_18843804.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
gi|166090097|dbj|BAG04805.1| modification methylase NgoBI [Microcystis aeruginosa NIES-843]
gi|389833509|emb|CCI21930.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9809]
Length = 330
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A S+Y NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDARSIYHANF------GDQPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ ++I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLEVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|398353748|ref|YP_006399212.1| ngoMIVM: modification methylase NgoMIV [Sinorhizobium fredii USDA
257]
gi|390129074|gb|AFL52455.1| ngoMIVM: modification methylase NgoMIV [Sinorhizobium fredii USDA
257]
Length = 667
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L A E ++I+ +A + + N P N+ +++++ + + D+++ PC
Sbjct: 310 LGLEAAGFEPAALVEIDKNAAATLRLNRPGWNVIQQDVRTVDFKPFRSQRIDLLVGGLPC 369
Query: 64 QPFTR--TGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGFEGSRSRDLIT-- 117
QP++ GL KD D R L++ A+ ++ + ENV G + S+ D +
Sbjct: 370 QPYSEDGKGLGKD--DPR----DLLMQGARAVEEMRPWACMFENVAGLQHSKHADHLGAF 423
Query: 118 -SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
S L +AG+ F ++ +GV R R ++ R S + F S P
Sbjct: 424 LSALKKAGYVVDLFRMNTEDYGVAQERERLLIVGMRG----ESMSGFRMPPS------FP 473
Query: 177 KLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRFHVFDIVNGKASS 232
+ + N + + M +G + S + + D LLR IV K S
Sbjct: 474 QWRTNLGDAIGDLMAANGWEGAQEWSRARREQIVKKDGALLRGVLASTIVGRKGGS 529
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
+V+ +I+I+ + ++ NFP ++ +++ + EEI A S DV+ PPC
Sbjct: 30 GFDVLASIEIDPIHCAAHEFNFPFWSVLCQDVIKLTGEEIRATSSIQNQDIDVVCGGPPC 89
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G ++ + D R + + + + + + + ++ENV G +S+ L+ ++ +
Sbjct: 90 QGFSLIG-KRVLDDERNSLVFHFLRLVLEL-KPKYFVMENVAGMGIGKSQQLLEELIKKF 147
Query: 123 --AGFRFQ--EFLLSPTQFGVPNSRTRYYLIAKRS 153
G++ Q +L+ + FGVP +R R +L+ R
Sbjct: 148 QENGYQVQLPYQVLNASNFGVPQNRKRLFLLGCRQ 182
>gi|301597599|ref|ZP_07242607.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB059]
Length = 309
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 47 EEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENV 104
E+ P + + PCQPF+ K D R T L ET I L + +L+ENV
Sbjct: 20 EKNREKEPLLFVACAPCQPFSTQNKSKSEDDIRRTLLD---ETHRFISKLKPEYILVENV 76
Query: 105 KGFEG-SRSRD----LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----P 154
G + + +D + L ++ EF+ ++GVP R R+ L+A +S P
Sbjct: 77 PGLQKIDKEKDGPYKRFITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASKSGKIEIP 136
Query: 155 AAHSSEASFCFETSSELMTELPKLKANTCNP 185
A E +T + + E P +KA +P
Sbjct: 137 AKTHGEGLEPIKTVRDFIGEFPAIKAGEIHP 167
>gi|352094116|ref|ZP_08955287.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
gi|351680456|gb|EHA63588.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
Length = 680
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF----PRTNLRGRNIQSFSIEEINAMSPDVILM 59
L H EVV A DI + + ++H+F + +L + + ++NA +V L+
Sbjct: 61 LGLHRAGFEVVLACDIRPDSIATHRHHFGGCSEQCDLSDPEVLAQLCRQLNAGG-EVALV 119
Query: 60 S--PPCQPFTRT-----------GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG 106
+ PPCQPF+R K++ + R + + + + L+ENV
Sbjct: 120 AGGPPCQPFSRNIRWRKHDDDVIEQHKELNEGRRELWESFLTVVEGVMP-RAFLMENVPD 178
Query: 107 FEGSRSRDLITSMLTRA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ +++ +++RA G+R L+ + GVP R R ++ R P A + S+
Sbjct: 179 IAQTGDQEVFRGIVSRAEAAGYRVHARLVHAWEHGVPQLRPRLFIAGTRLPNAKGN--SY 236
Query: 164 C------------FETS---SELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRR 208
C E + E + +LP+LK + G ++ L R
Sbjct: 237 CSPLVWPEPSCSSLEEAVSLEEAIGDLPELKGDWWEKWNETCDYRGPGNAYQ---KLMRS 293
Query: 209 YLVSDKDLL 217
+L D+D+L
Sbjct: 294 WLPVDRDVL 302
>gi|409991706|ref|ZP_11274944.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|409991734|ref|ZP_11274970.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis]
gi|409937402|gb|EKN78830.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|409937432|gb|EKN78858.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 406
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H EVV AID N +A ++ N T + NIQ I ++ D+I PCQ F
Sbjct: 33 HRAGFEVVWAIDCNGAACRTFRRNISET-IACNNIQEIDITKVPKA--DLITGGFPCQDF 89
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT----- 121
+ G + + R +Y +E I + + ENVKG + I ++
Sbjct: 90 SMIGKRPGLTGTRGNLYTYFLEFIRHHKP-KAFIAENVKGLLSANKYKAIAKIIADFENI 148
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA---------HSSEASFCFETSSELM 172
G+ + L + +GVP R R ++ R + S+ + + T+ + +
Sbjct: 149 EPGYLVKPKLYNFADYGVPQYRERVLIVGVRMDTGFNFIHPFPEYGSDRLYPYRTAKQAL 208
Query: 173 TELPKLKANTCNPLLSRMTLHGILDSTHPSGD 204
++ K+ N + + T+ I+ P G+
Sbjct: 209 KDVEKVTDNNEHQRIHPRTVE-IIKRIKPGGN 239
>gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 337
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 74/198 (37%), Gaps = 24/198 (12%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD---VILMS 60
L H +VVTA + + ++ NF TNL +I+ E PD I+
Sbjct: 15 LGFHKAGFKVVTANEFDAKICPTFRANFSDTNLIEGDIRDIPSSEF----PDNIAGIIGG 70
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLL--ENVKGFEGSRSRDLI-- 116
PPCQ ++ G K I DAR E I + Q L ENV G R D +
Sbjct: 71 PPCQSWSEAGSLKGIEDARG---QLFYEYIRILHDKQPLFFVAENVSGMLAKRHTDAVRG 127
Query: 117 -TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS---------PAAHSSEASFCFE 166
+ +AG+ +L+ + VP R R + I R P + +
Sbjct: 128 FMELFDKAGYDVNLKMLNANDYDVPEDRDRVFYIGFRKDLNIHNFEYPTPQKHKPTLRES 187
Query: 167 TSSELMTELPKLKANTCN 184
T +P L+ N N
Sbjct: 188 IWDLQFTAIPALEKNKTN 205
>gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
Length = 361
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 2 ERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNI-----QSFSIEEINAMSPDV 56
E L+NH ++ VV A+D N YK N P NL +I ++ D+
Sbjct: 33 EGLTNH--NIRVVAAVDNNPIVCKTYKINHPNVNLYESDIALLDPMDIRQNDLKGADVDI 90
Query: 57 ILMSPPCQPFT---RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR 113
+++ PCQPF+ RT Q ++ A+ + + P++ + ENV G + R
Sbjct: 91 LVVCAPCQPFSSQNRTKKQDKRSNLIFEAVRFARDLRPSV-----IFFENVPGLATEKYR 145
Query: 114 DLITSM---LTRAGFRFQEFL-LSPTQFGVPNSRTRYYLIA 150
++I + L G++ E + + +GVP R R L A
Sbjct: 146 EIINKLKHDLLELGYQLGEPIRVDAADYGVPQRRIRCILFA 186
>gi|406997686|gb|EKE15708.1| hypothetical protein ACD_11C00108G0002 [uncultured bacterium]
Length = 326
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDV--ILMSPPCQPFT 67
VV A + + + +++NFP+T L R+I EI PDV I+ PPCQ ++
Sbjct: 21 GFHVVWANEYDPTIWETFEYNFPKTKLDKRSIVDVPASEI----PDVDGIIGGPPCQSWS 76
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AG 124
G + I D R I + + L ENV G + ++ ++++ AG
Sbjct: 77 EAGAGRGINDKRGKLFYDYIRLLKE-KQPKFFLAENVSGILHPKHKEAFSNIIKEFENAG 135
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ LL+ + VP R R ++
Sbjct: 136 YEISCKLLNANDYDVPEDRLRVIIVG 161
>gi|419835140|ref|ZP_14358588.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-46B1]
gi|421341858|ref|ZP_15792267.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HC-43B1]
gi|423733488|ref|ZP_17706718.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|424007784|ref|ZP_17750740.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-44C1]
gi|395947035|gb|EJH57693.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HC-43B1]
gi|408632260|gb|EKL04725.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-41B1]
gi|408859281|gb|EKL98942.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-46B1]
gi|408867641|gb|EKM06997.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HC-44C1]
Length = 417
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV+L PCQPF+ GL+ I D R T L + I I + LLENVKG +
Sbjct: 157 DVLLAGFPCQPFSHAGLKLGIEDTRGT-LFHDIANILETKKPKFALLENVKGLISHDKGY 215
Query: 112 SRDLITSMLTRAGFR-------------------FQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +I LT+ G+ +E +L FG+P +R R Y++ R
Sbjct: 216 TLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVLWR 275
Query: 153 SPAAHSSE 160
S E
Sbjct: 276 DGEVKSFE 283
>gi|425450148|ref|ZP_18829980.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
gi|389769132|emb|CCI05932.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 7941]
Length = 331
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF PR ++ I ++ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYHANFGDQPRGDIT-------EIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ +I L +
Sbjct: 91 CGNLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YIDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|418095108|ref|ZP_12732226.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA16531]
gi|353772838|gb|EHD53339.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA16531]
Length = 244
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 12 EVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTR 68
E + +I+ A + YK H+ + + +I + S + I + S D+I PCQ F+
Sbjct: 7 ECIGFCEIDKFARASYKAIHD-TKGEIELHDITTVSDDTIRGIGSVDIICGGFPCQAFSI 65
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGF 125
G ++ D R T L + I +I + L LENVKG E + + I S L G+
Sbjct: 66 AGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETIISTLDELGY 124
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA-------KRSPAAHSSEASFCFETSSELMTELPKL 178
+ +L+ FGVP +R R ++I +R + F FE PK+
Sbjct: 125 NVEWQVLNSKNFGVPQNRERVFIIGHSRKRGTRRVFPIGRANREFDFE---------PKI 175
Query: 179 K--ANTCNP-LLSRMTLHGILDSTHPSGDLYRR 208
K NT NP S+ T + DS G L R
Sbjct: 176 KIVGNTKNPNGTSQGTGSVVYDSNGLVGTLCAR 208
>gi|126740127|ref|ZP_01755817.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
gi|126718946|gb|EBA15658.1| DNA modification methylase M.NGOI [Roseobacter sp. SK209-2-6]
Length = 319
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 17 IDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
++I+ + +HN P N+ ++++F N D++ PC PF+ G Q
Sbjct: 29 VEIDKHCCATLRHNRPSWNVLEEDVRNFKEVAGNYRGIDLLAGGLPCPPFSVAGKQLGEK 88
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGFEGS---RSRDLITSMLTRAGFRFQEFLLS 133
D R IE + A + +++ENV+GF + R+ + LT+ G+ LL+
Sbjct: 89 DER-NLFDDAIEIVDAT-RPRAVMIENVRGFLDAVFHDYREKLKKQLTKLGYETDWRLLN 146
Query: 134 PTQFGVPNSRTRYYLIAKRS 153
+ +GVP R R ++A R
Sbjct: 147 ASDYGVPQLRPRVAIVALRK 166
>gi|420447602|ref|ZP_14946492.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
gi|393062521|gb|EJB63372.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
Length = 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L G+ +L+ T F + +R R Y++ R H
Sbjct: 119 TFKTIIKALQEVGYTTYYQILNSTDFQLAQNRERLYIVGFRKDLKH 164
>gi|425454808|ref|ZP_18834534.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9807]
gi|389804430|emb|CCI16581.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9807]
Length = 405
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 119 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 175
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G +++ R + E + + S Q ++ENV E S+ + G+
Sbjct: 176 G-KRNEGLGRASLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILIQAKQIFKSHGYGLTG 233
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 234 KVINSCYCGVPQTRKRYFLIGK 255
>gi|423068110|ref|ZP_17056898.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
gi|355367001|gb|EHG14714.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
Length = 318
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 69 DLLMHGSPCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMNIKPKVVLWENVKGV--- 125
Query: 111 RSRDLITSM------LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R+L S + R G+ + +L+ FG+P R R ++++
Sbjct: 126 LDRNLRASFFHYLKEMERLGYESKYEILNAMDFGIPQKRERIFVVS 171
>gi|415747050|ref|ZP_11475794.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
gi|315931535|gb|EFV10502.1| DNA (cytosine-5) methyltransferase [Campylobacter jejuni subsp.
jejuni 327]
Length = 284
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I E N +++L PCQ F+ G +K D R T L + + I + + LENV
Sbjct: 62 QINENNIPKHNILLAGFPCQAFSIAGHRKGFNDIRGT-LFFDVARIVKKHKPEIVFLENV 120
Query: 105 KGFEG---SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
KGF+ ++ ++ + L G+ +L+ FG+P +R R Y++A
Sbjct: 121 KGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVA 169
>gi|186686332|ref|YP_001869528.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|186468784|gb|ACC84585.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 331
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPR-------TNLRGRNIQSFSIEEINAMSPDVILMSPP 62
+V A D A VY+ NF NLR +N Q F + P++I+ PP
Sbjct: 34 GFNIVAAFDNWKPAIDVYQKNFSHEIFDYDLNNLR-KNYQIFR-----EICPEIIIGGPP 87
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
CQ F+ G ++D R LS + I Q L+ENV F S + +
Sbjct: 88 CQDFSSAG-KRDENLGRGD-LSIVFSEIVTSVLPQWFLIENVDLFRKSNKYKEVKQIFKN 145
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
G+ E +L + GVP R R++ +
Sbjct: 146 TGYGLSEIILDASLCGVPQKRKRFFCFGE 174
>gi|385339121|ref|YP_005892993.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|385854261|ref|YP_005900774.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|416176215|ref|ZP_11609516.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|416190835|ref|ZP_11615946.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|433466202|ref|ZP_20423666.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|433468283|ref|ZP_20425722.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|433491538|ref|ZP_20448641.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|433495787|ref|ZP_20452837.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|433497778|ref|ZP_20454798.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|433499860|ref|ZP_20456854.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|433502032|ref|ZP_20459005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|433508261|ref|ZP_20465147.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|432205525|gb|ELK61553.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|432206688|gb|ELK62691.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|432231223|gb|ELK86890.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|432237429|gb|ELK93023.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|432237813|gb|ELK93403.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|432237998|gb|ELK93582.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|432243787|gb|ELK99293.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|432249912|gb|ELL05310.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
Length = 332
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|119493789|ref|ZP_01624358.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
gi|119452484|gb|EAW33671.1| type II restriction enzyme HaeII [Lyngbya sp. PCC 8106]
Length = 689
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D++L PCQ F+ G + +AR T L Y IE I Q LLENVK + +
Sbjct: 71 DILLAGFPCQAFSIIGKMEGFNEARGT-LFYNIEMILKAKQPQAFLLENVKQLKTHDKGK 129
Query: 112 SRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ +IT L G+ +L+ FG+P R R Y++
Sbjct: 130 TFKVITEHLQNLGYHLYTEVLNALDFGLPQKRERTYIVG 168
>gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 406
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H EVV AID N +A ++ N T + NIQ I ++ D+I PCQ F
Sbjct: 33 HRAGFEVVWAIDCNGAACRTFRRNISET-IACNNIQEIDITKVPKA--DLITGGFPCQDF 89
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT----- 121
+ G + + R +Y +E I + + ENVKG + I ++
Sbjct: 90 SMIGKRPGLTGTRGNLYTYFLEFIRHHKP-KAFIAENVKGLLSANKYKAIAKIIADFENI 148
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA---------HSSEASFCFETSSELM 172
G+ + L + +GVP R R ++ R + S+ + + T+ + +
Sbjct: 149 EPGYLVKPKLYNFADYGVPQYRERVLIVGVRMDTGFNFIHPFPEYGSDRLYPYRTAKQAL 208
Query: 173 TELPKLKANTCNPLLSRMTLHGILDSTHPSGD 204
++ K+ N + + T+ I+ P G+
Sbjct: 209 KDVEKVTDNNEHQRIHPRTVE-IIKRIKPGGN 239
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-----INAMSPDVILMSPPCQPF 66
+++ ID + A ++ N + +I F+ E+ IN D+I+ PPCQ
Sbjct: 27 DILLGIDNDFDALRTFEKNHKNSKTLEGDITQFTYEKDIKPLINDQKIDIIVGGPPCQGM 86
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLITSMLTR 122
+ +G +K D R + I + I + ++ENV G F+G + +D I T
Sbjct: 87 SLSGPRK-FEDPRNSLYLSYIRLVSEI-RPKAFVIENVPGLASLFKG-QIKDSIIEKFTE 143
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
G++ +L + FGVP R R + ++ + F T+ +++LP L+
Sbjct: 144 MGYKVNYKILVASDFGVPQKRRRIVFVGLQNDVFDFNFPEFGMVTTEMALSDLPSLE 200
>gi|421558133|ref|ZP_16004018.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|402338905|gb|EJU74134.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
Length = 333
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 10/186 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
+ + ++++ + Y+ NFP L +++ + + +++ N + D+I+ PPCQ
Sbjct: 25 GFQQLLSVEMESDYCQTYRTNFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQG 84
Query: 66 FTRTG-LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F+ G + + D L I I ++ENV ++R I
Sbjct: 85 FSMAGKIGRTFTDDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQ 144
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHS--SEASFCFETSSELMTELPKLK 179
G+ + +LS FGVP R+R I +R S +T + PKL
Sbjct: 145 NIGYSVECKILSAADFGVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLA 204
Query: 180 ANTCNP 185
A NP
Sbjct: 205 AGESNP 210
>gi|294673127|ref|YP_003573743.1| C-5 cytosine-specific family DNA methylase [Prevotella ruminicola
23]
gi|294473723|gb|ADE83112.1| DNA methylase, C-5 cytosine-specific family [Prevotella ruminicola
23]
Length = 346
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 53 SPD--VILMSPPCQPFTRTGL------QKDIADARCTALSYL--IETIPAIPSLQCLLLE 102
+PD +I+ PPCQPF++ G +K + D R YL IE I LLE
Sbjct: 79 NPDKLIIVGGPPCQPFSKAGYWITNEKRKAVDDERNMVGEYLRIIEEI----RPDGFLLE 134
Query: 103 NVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
NV+ + D I +TR G+ F L + ++G+P R R +A + P
Sbjct: 135 NVESILHPTNKAAVDYIEEKITRMGYHFVRILANALEYGIPQKRKRVLFLASKKP 189
>gi|308185227|ref|YP_003929360.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
gi|308061147|gb|ADO03043.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SJM180]
Length = 317
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E+V A D + A YK N + + G IE+ + D+++ PCQPF+
Sbjct: 21 GFEIVWANDFDKHAVETYKANIGQNIILG----DIEIEKDHICGHDILIGGFPCQPFSTL 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G + D R T + E I + ++LENVK S I L ++
Sbjct: 77 GSLQGFEDKRGTLFFTICEIIKK-HRPKIVVLENVKNLINHNKGESFKRILFELNELDYQ 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF-----CFETSSELMTELPKLK 179
+L+ FG+P R R +++A R + + E F C ++ +L+ + +LK
Sbjct: 136 VNYDILNTLDFGIPQQRNRVFIVALRKNSFTNLEFVFPAKIPCKISTLDLLDKQVELK 193
>gi|387787193|ref|YP_006252261.1| type II DNA modification methyltransferase [Streptococcus
pneumoniae ST556]
gi|379136935|gb|AFC93726.1| type II DNA modification methyltransferase [Streptococcus
pneumoniae ST556]
Length = 412
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 10/194 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAM-SPDVILM 59
R+ + E + +I+ A + YK H+ + + +I + S + I + S D+I
Sbjct: 14 RIGMESAGHECIGFCEIDKFARASYKAIHD-TKGEIELHDITTVSDDTIRGIGSVDIICG 72
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG E + + I
Sbjct: 73 GFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHENGVTFETI 131
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
S L G+ + +L+ FGVP +R R ++I S F ++ ++
Sbjct: 132 ISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIGHLRGG--SGRKVFPLSRENQSISNQS 189
Query: 177 KLKANTCNPLLSRM 190
+K NP + M
Sbjct: 190 VVKIGNVNPSGNGM 203
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS---PDVILMSPPCQPFTR 68
EV+ A DI+ A + Y+ N G +I I+ IN DV++ PCQ F+
Sbjct: 23 EVIWANDIDKDAVATYRENI------GDHIVCDDIKNINIYDLPEADVVVGGFPCQGFSL 76
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGF 125
++ + D R + TI I + + ENV+G ++I +++ AG+
Sbjct: 77 ANRKRTLEDERNQLYKFFYSTI-KIKQPKFFIAENVRGILSLGKGEVIKQIVSDFEEAGY 135
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
L++ +GVP +R R +I +R F T S+ +LP+
Sbjct: 136 ITTVNLVNMANYGVPQTRQRVLIIGQRKDYGEEMLFQFPQPTFSKDGKDLPRW 188
>gi|390439088|ref|ZP_10227507.1| Modification methylase HindV [Microcystis sp. T1-4]
gi|389837511|emb|CCI31631.1| Modification methylase HindV [Microcystis sp. T1-4]
Length = 310
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 24 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 80
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G +++ R E + + S Q ++ENV E S+ + G+
Sbjct: 81 G-KRNEGLGRANLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILTQAKQIFKSHGYGLTG 138
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELP 176
+++ GVP +R RY+LI K E F + +E ++ P
Sbjct: 139 KVINSCYCGVPQTRKRYFLIGK-----MKQEDDFLIDEINENLSSQP 180
>gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus]
Length = 385
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++V+ A +I+ A++ Y+ N P T + +I+ E + D+I PPCQ F+
Sbjct: 25 GVKVLCANEIDKYASATYQANNPETKFKLGDIRDVYSELKEFKNIDIIFGGPPCQGFSVA 84
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGF 125
G + + D R T + ++ + + + ++ENVK + R+ I + G+
Sbjct: 85 G-KMNPDDERSTLVWSFLDVVKLVRP-RAFVMENVKALATLEKWKNIRERIIKLSNDMGY 142
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIA 150
++L+ + +GVP R R + +
Sbjct: 143 SCYPYVLNSSHYGVPQKRERVFFVG 167
>gi|288919495|ref|ZP_06413826.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288349098|gb|EFC83344.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 642
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMSPPCQP 65
L VV +D + A ++H+F L ++EI ++ DV++ PPCQP
Sbjct: 51 GLRVVLGVDHDPEATETHRHHFAGLTLDQDLSDPGRVDEIAGLIRSLRLDVVVGGPPCQP 110
Query: 66 FTRTGLQK-------DIADA----RCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
F+R G K +A++ R S+L A P C+L+ENV R
Sbjct: 111 FSRAGRSKIRHRVRLGLAESHDRRRDLWESFLAIVRQAEPG--CVLMENVPDMALDREMF 168
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
+ I L G+ + L+ ++ VP SR R + A R+P
Sbjct: 169 IFRTIVHTLEELGYAVEARLVDTYRYSVPQSRQRLIIAAMRTP 211
>gi|414579836|ref|ZP_11436979.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-1215]
gi|420877941|ref|ZP_15341308.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0304]
gi|420883897|ref|ZP_15347257.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0421]
gi|420889479|ref|ZP_15352827.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0422]
gi|420892692|ref|ZP_15356036.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0708]
gi|420902299|ref|ZP_15365630.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0817]
gi|420906522|ref|ZP_15369840.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-1212]
gi|420969974|ref|ZP_15433175.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0921]
gi|392079660|gb|EIU05486.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0421]
gi|392082850|gb|EIU08675.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0304]
gi|392087227|gb|EIU13049.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0422]
gi|392099660|gb|EIU25454.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0817]
gi|392104426|gb|EIU30212.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-1212]
gi|392108573|gb|EIU34353.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0708]
gi|392124360|gb|EIU50121.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-1215]
gi|392175912|gb|EIV01573.1| cytosine-specific methyltransferase [Mycobacterium abscessus
5S-0921]
Length = 327
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
+ L H + A++I A + N P + ++++ S E+ + D++
Sbjct: 12 GQSLGLHLAGFDHELAVEIEPDACQTLRQNMPTWEIHEGDVRAISGEKYRGI--DLLAGG 69
Query: 61 PPCQPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRD 114
PC PF+ G Q D R AL + E P + ++LENV+G ++ R+
Sbjct: 70 VPCPPFSIAGKQLGEDDERDLFPEALRLVEEARP-----KAVMLENVRGLSTAKFQTYRN 124
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ +L+ ++FGVP R R+ L+A
Sbjct: 125 SIRASLEDLGYKSDWQVLNASEFGVPQLRPRFILVA 160
>gi|260579295|ref|ZP_05847178.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
gi|258602594|gb|EEW15888.1| modification methylase NaeI (cytosine-specificmethyltransferase
NaeI) (M.NaeI) [Corynebacterium jeikeium ATCC 43734]
Length = 372
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 5 SNHAFSLEVV-----TAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILM 59
A LE ++++ A S + N P N+ ++ F I A D++
Sbjct: 46 GGQALGLEAAGFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFDISPF-ADDLDLLAG 104
Query: 60 SPPCQPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSR 113
PC PF+ G Q D R AL ++ P + L+LENV+G +R R
Sbjct: 105 GVPCPPFSIAGKQLGQDDERDLFPRALELTAQSRP-----KALMLENVRGLAQPRFARYR 159
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
+ + + L G+R +++ FGVP R R+ L+A R P A
Sbjct: 160 NELVAELEELGYRTFWEVVTAADFGVPQLRPRFVLVALREPYA 202
>gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 686
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 42/246 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSP-DVIL 58
L H + +V+ A DI + ++H+F +L R + + E++N +I
Sbjct: 66 LGLHRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIA 125
Query: 59 MSPPCQPFTR-----------TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF 107
PPCQPF+R + +++ + R I + + + L+ENV
Sbjct: 126 GGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKP-KAFLMENVTDI 184
Query: 108 EGSRSRDLITSMLTRA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKR----------SP 154
+ +++ S++ RA G+R L+ Q+GVP R R ++ + P
Sbjct: 185 AQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMKWPKP 244
Query: 155 AAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGD---LYRRYLV 211
S E + T E +++LP LK + + G P D L R +L
Sbjct: 245 KYDSVEEAV---TLDEAISDLPPLKGGWNEKWDEKYSYEG------PKNDYQKLMRDWLD 295
Query: 212 SDKDLL 217
D +++
Sbjct: 296 IDDEMI 301
>gi|425434415|ref|ZP_18814884.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
gi|389676067|emb|CCH94831.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9432]
Length = 331
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y+ NF PR ++ I ++ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYQANFSDKPRGDIT-------EIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T ++ + A +LENVK +G ++ +I L +
Sbjct: 91 CGNLKGFEDTRGTLFFEIVRILKA-KQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|418962312|ref|ZP_13514179.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345960|gb|EID24044.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 325
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 77 DLLMHGSPCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDK 136
Query: 111 RSRDLITSMLT---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R L R G+ + +L+ +FG+P R R ++++
Sbjct: 137 NMRASFFHYLKEMERLGYENKYEILNAIEFGIPQKRERIFVVS 179
>gi|207108548|ref|ZP_03242710.1| type II DNA modification enzyme [Helicobacter pylori
HPKX_438_CA4C1]
Length = 171
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 20 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 78
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + +R R Y++ R H
Sbjct: 79 TFKTIIKALQEAGYTTYYQILNSADFQLAQNRERLYIVGFRKDLKH 124
>gi|419652936|ref|ZP_14183979.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|380627593|gb|EIB45971.1| hypothetical protein cje146_08282 [Campylobacter jejuni subsp.
jejuni 2008-894]
Length = 256
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I E N +++L PCQ F+ G +K D R T L + + I + + LENV
Sbjct: 62 QINENNIPKHNILLAGFPCQAFSIAGHRKGFNDIRGT-LFFDVARIVKKHKPEIVFLENV 120
Query: 105 KGFEG---SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
KGF+ ++ ++ + L G+ +L+ FG+P +R R Y++A
Sbjct: 121 KGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRERIYIVA 169
>gi|254413051|ref|ZP_05026823.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180215|gb|EDX75207.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 353
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 40 NIQSFSIEEINAMSPD------VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAI 93
N+ F + A PD VI+ PPCQPF+ G Q+ + D+R +L
Sbjct: 64 NLHGFCYQTTLARQPDLVDGADVIIGGPPCQPFSVGGHQRGLKDSRDGFPIFLDAVKSYR 123
Query: 94 PSLQCLLLENVKG--FEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
P L L ENV+G F + I S L + + +L+ +GVP R R + +A
Sbjct: 124 PQLA--LFENVRGMLFRNKTYFEEIVSALRELNYIVEWEILNAADYGVPQRRERLFCVAH 181
Query: 152 RS-----PAAHSSEASFCFETSSELMTELP 176
R P H + E EL +P
Sbjct: 182 RGGWKWHPKTHHNLPYTVGEALGELALIVP 211
>gi|421882427|ref|ZP_16313698.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
gi|375315272|emb|CCF81694.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
Length = 313
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGL 71
V A +IN A Y NFP+T L G + I P D++ PCQ F+ G
Sbjct: 25 VFASEINQDAQKTYALNFPKTPLFG----DITDPRIQTQIPPFDILCAGFPCQAFSIAGY 80
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR-F 127
Q+ D R T L + I I + L LENVK + R+ ++I + L+ G+ +
Sbjct: 81 QRGFEDTRGT-LFFEIAKIAHKHRPKVLFLENVKNLKTHDRGRTFEVICNTLSDLGYVIY 139
Query: 128 QEFLLSPTQFGVPNSRTRYYLIA 150
L S T +P +R R +++A
Sbjct: 140 SAVLNSATHANIPQNRERLFIVA 162
>gi|443654424|ref|ZP_21131346.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
gi|159026805|emb|CAO86650.1| ngoBIM [Microcystis aeruginosa PCC 7806]
gi|443333816|gb|ELS48356.1| cytosine-specific methyltransferase [Microcystis aeruginosa
DIANCHI905]
Length = 331
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF PR ++ I ++ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYHANFGDQPRGDIT-------EIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ ++I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLEVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|421489648|ref|ZP_15937025.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
gi|400374715|gb|EJP27631.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
Length = 418
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYK--HNFPRTNLRGRNIQSFSIEEINAMS-PDVILM 59
R+ + E + +I+ A + YK H+ + + +I + S + I + DVI
Sbjct: 17 RIGMESAGHECIGFCEIDKFARASYKAIHD-TKGEIELHDITTVSDDTIRGIGHVDVICG 75
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G ++ D R T L + I +I + L LENVKG + + ++I
Sbjct: 76 GFPCQAFSIAGARRGFEDTRGT-LFFEIARFASILKPRYLFLENVKGLLNHDKGNTFEVI 134
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
S L G+ + +L+ FGVP +R R ++I
Sbjct: 135 LSALDELGYDVEWQVLNSKNFGVPQNRERVFIIG 168
>gi|420419623|ref|ZP_14918711.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393038989|gb|EJB40021.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 318
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR- 113
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG +
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHNKKA 124
Query: 114 --DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
++I L AG+ +L+ F + +R R Y++ R H
Sbjct: 125 TFNIIIKALQEAGYTTYYKILNSADFQLAQNRERLYIVGFRKDLKH 170
>gi|380694454|ref|ZP_09859313.1| DNA-cytosine methyltransferase [Bacteroides faecis MAJ27]
Length = 343
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ ++ +E V + D + A Y+ NF P +++ +++E + D++
Sbjct: 18 RLAMNSSQVECVFSSDNDKFAQQTYEANFHEVPTGDIK-------AVDEKDIPKFDILTA 70
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQPF+ G ++ D L + + I + LENVKG + ++ +
Sbjct: 71 GFPCQPFSYAGEKQGFNDEVRGTLFFDVCRILEYHKPPMVFLENVKGLKSHDKGKTLQTV 130
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L + G+ +LS +G+P R R+Y +A R+
Sbjct: 131 LDTLKKLGYYPHWTILSSLDYGLPQKRERWYCVAFRT 167
>gi|50513617|pdb|1SVU|A Chain A, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
gi|50513618|pdb|1SVU|B Chain B, Structure Of The Q237w Mutant Of Hhai Dna
Methyltransferase: An Insight Into Protein-Protein
Interactions
Length = 327
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + E V + + + A VY+ NF P ++ + E D++
Sbjct: 25 RLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDIT-------QVNEKTIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G QK D+R T L + I I + + +ENVK F + + +++
Sbjct: 78 GFPCQAFSISGKQKGFEDSRGT-LFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + + F +L+ +G+P R R Y+I R+
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRN 173
>gi|363890146|ref|ZP_09317490.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
gi|361965982|gb|EHL18935.1| hypothetical protein HMPREF9628_01932 [Eubacteriaceae bacterium
CM5]
Length = 320
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D ++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 72 DFVMHGSPCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKEKPKVVLWENVKGVLDK 131
Query: 111 RSRDLITSMLT---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R L R G+ + +L+ FG+P +R R ++++
Sbjct: 132 NMRASFFHYLKEMERLGYESKYKILNAMDFGIPQNRKRIFVVS 174
>gi|68536951|ref|YP_251655.1| DNA restriction-modification system, DNA methylase [Corynebacterium
jeikeium K411]
gi|68264550|emb|CAI38038.1| putative DNA restriction-modification system, DNA methylase
[Corynebacterium jeikeium K411]
Length = 341
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 5 SNHAFSLEVV-----TAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILM 59
A LE ++++ A S + N P N+ ++ F I A D++
Sbjct: 15 GGQALGLEAAGFIHRAVVELDGHAVSTLRANRPAWNIVHGDVLDFDISPF-ADDLDLLAG 73
Query: 60 SPPCQPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSR 113
PC PF+ G Q D R AL ++ P + L+LENV+G +R R
Sbjct: 74 GVPCPPFSIAGKQLGQDDERDLFPRALELTAQSRP-----KALMLENVRGLAQPRFARYR 128
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
+ + + L G+R +++ FGVP R R+ L+A R P A
Sbjct: 129 NELVAELEELGYRTFWEVVTAADFGVPQLRPRFVLVALREPYA 171
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ V AI+I+ ++ Y N P T + ++I + + + ++ PPCQ F+ +
Sbjct: 28 GITVRYAIEIDENSAKTYSKNHPNTQIIRQDISNVETSTFSHENIFILFGGPPCQGFSVS 87
Query: 70 GLQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKG---FEGSRSRDLITSMLTRAG 124
+ + L E + + L + L ENV+G F+ ++ I + + G
Sbjct: 88 NRKTRTVENENNGL--FKEFLRFVDDLNPEWFLFENVEGLVNFDKGKTLRYILNQFKKIG 145
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ E +L + +GVP R R++++ R+
Sbjct: 146 YKTSEAILYASDYGVPQHRNRFFIVGNRN 174
>gi|398345731|ref|ZP_10530434.1| DNA-methyltransferase (dcm) [Leptospira broomii str. 5399]
Length = 420
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V A +I+ ++Y NF P ++R N++S D++ PCQPF++
Sbjct: 23 DCVFACEIDEELRNIYSDNFGIRPEGDIRKINLKSIP-------KHDILCAGFPCQPFSK 75
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL---QCLLLENVKGF---EGSRSRDLITSMLTR 122
G QK C L E + I + + LENV ++ I L
Sbjct: 76 AGFQKGF---NCPDYGDLFEYVYKIIKFHNPKFVFLENVPNIVKHNNGKTWKTIVDKLEN 132
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ +LSP +G+P R R Y+I +
Sbjct: 133 IGYNINHNVLSPHFYGIPQIRERVYIICTKK 163
>gi|256821199|ref|YP_003142398.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
gi|256799179|gb|ACV29833.1| DNA-cytosine methyltransferase [Anaerococcus prevotii DSM 20548]
Length = 321
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y + ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGEEYKAKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEIKDKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
+ L G++ + +L+ FG+P R R +++++
Sbjct: 134 IYLKELENLGYKSKYEILNAMDFGIPQKRERIFVVSQ 170
>gi|383181185|ref|YP_005459190.1| C-5 cytosine-specific DNA methylase [Shigella sonnei 53G]
gi|416282766|ref|ZP_11646533.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
gi|320180750|gb|EFW55676.1| DNA-cytosine methyltransferase [Shigella boydii ATCC 9905]
Length = 340
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD----VILMSPPCQP 65
L+VV ID+ Y+ N ++ ++I + EE+ + D V+ PCQP
Sbjct: 23 GLDVVAGIDLEGECRFPYERN-NKSKFIEQDIAKVTKEELLRLYGDASVKVLAGCAPCQP 81
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F++ KD AD + L Y E + S + + +ENV + + + L + G+
Sbjct: 82 FSKYTQGKDKADDKKWPLLYEFERLIREVSPEIVTMENVPDVTKHKVYNDFYNSLLKLGY 141
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH-SSEASFCFETSSELMTELPKLKANTCN 184
+ ++G+P +R+R+ L+A + A +T + + LP L+ +
Sbjct: 142 YVWASKIDCVEYGIPQNRSRHVLLASKLGAIELVKRDDVILKTVRDAIGNLPPLEDGQTD 201
Query: 185 P 185
P
Sbjct: 202 P 202
>gi|420417424|ref|ZP_14916524.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393033776|gb|EJB34838.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 318
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLISHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|354552089|ref|ZP_08971397.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|353555411|gb|EHC24799.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 319
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ E V I + +YK + R L +EE +++PD+I+ PPCQ F+
Sbjct: 30 NWEPVVKIYQKNFKHPIYKWDLSRYEL--------YLEEFKSLNPDLIMGGPPCQDFSSA 81
Query: 70 GLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
G ++D R A S ++ I +P + +LENV F + ++L +AG+
Sbjct: 82 G-KRDENLGRGDLTIAFSQIVTQI--LP--KVFVLENVARFNKTNKYIEAKTILKQAGYG 136
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
E +L + GVP R R++ +
Sbjct: 137 ITEKVLDASLCGVPQKRKRFFWVG 160
>gi|301513566|ref|ZP_07238803.1| DNA-cytosine methyltransferase [Acinetobacter baumannii AB058]
Length = 303
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 47 EEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL--QCLLLENV 104
E+ P + + PCQPF+ K D R T L ET I L + +L+ENV
Sbjct: 14 EKNREKEPLLFVACAPCQPFSTQNKSKSEDDIRRTLLD---ETHRFISKLKPEYILVENV 70
Query: 105 KGFEG-SRSRD----LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS-----P 154
G + + +D + L ++ EF+ ++GVP R R+ L+A +S P
Sbjct: 71 PGLQKIDKEKDGPYKRFITFLESKKYKITEFIAKSEEYGVPQKRKRFVLLASKSGKIEIP 130
Query: 155 AAHSSEASFCFETSSELMTELPKLKANTCNP 185
A E +T + + E P +KA +P
Sbjct: 131 AKTHGEGLEPIKTVRDFIGEFPAIKAGEIHP 161
>gi|384889733|ref|YP_005764035.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d]
gi|297380299|gb|ADI35186.1| DNA-cytosine methyltransferase [Helicobacter pylori v225d]
Length = 264
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
DV++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 12 DVLISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 70
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 71 TFKTIIKALQEAGYTTYCQILNSADFQLAQKRERLYIVGFRKDLKH 116
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE-INAMSPD----VILMSPPCQPFTRTG 70
A+D N A +KHN P T + +I +++E I ++S + +++ PPCQ F+ G
Sbjct: 376 ALDFNEQALQTFKHNMPDTEIVHGDITDSAVKERIISLSKEKKVNMVIGGPPCQGFSLKG 435
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS---RDLITSMLTRAGFRF 127
+ + D R + + I + Q ++ENVK + + +D I + G+
Sbjct: 436 KKLGLNDPRNFLFLEYLNIVSEI-NPQVFIIENVKALLSTSAGWFKDQIVQRVEEMGYTV 494
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L+ +GVP R R I +
Sbjct: 495 RYGVLNSADYGVPQLRQRAIFICSKD 520
>gi|423303334|ref|ZP_17281333.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|423307943|ref|ZP_17285933.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|392688295|gb|EIY81583.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|392688928|gb|EIY82211.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 345
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN----AMSPDVILMSPPCQPFT---R 68
A +I+ A+SVYK N RT + NI++ S E++ + ++ PPCQ F+ R
Sbjct: 29 AFEIDELASSVYKLNHKRTKVITDNIRNVSTEKVKKQFKGKTIHLLAGCPPCQGFSSIRR 88
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ 128
+ D R T ++ + + + ++ENV G +S ++ G+
Sbjct: 89 LNKPTPVKDDRNTLINEYVRFVVDLKPY-TFMMENVPGLALDKSFEVALQTFESIGYFTD 147
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPL 186
+++ ++GVP SR R L+ R + + +T + + +LP L N+ +PL
Sbjct: 148 WRIVNVKEYGVPQSRKRLVLVGSRLAPIQIAHPTNKKKTVRQTIGKLP-LPENSDDPL 204
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF------- 107
D+++ PPCQ F+ G +++ D R + +E I + + L ENV+GF
Sbjct: 95 DLVVGGPPCQGFSMAGKRQN-DDVRNQLMHSYVEIIKLVQP-KMLFFENVQGFTVDFKDH 152
Query: 108 -EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ +++ S L R G++ +++ + FG+P +R R+ L A ++
Sbjct: 153 KDKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKRFILFASKNETYEIFFEELFNN 212
Query: 167 TSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSG---DLYRRYLVSDKDLLRRFHVF 223
L K+ + HG +DS G Y R + S + L+RR
Sbjct: 213 RDFFLKNRGLKIPVTVSQAINDLKNSHGEIDSKDTKGFKNGKYGRMISSYQKLMRR---- 268
Query: 224 DIVNGKASSTNCFTK 238
+I G ++ F K
Sbjct: 269 NIERGSLPDSHRFAK 283
>gi|420412482|ref|ZP_14911610.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393026760|gb|EJB27856.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
Length = 312
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I N D ++ P
Sbjct: 11 RLGLERCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNNLPDFDALISGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDL---ITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 127 LQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|289423000|ref|ZP_06424820.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
gi|289156574|gb|EFD05219.1| modification methylase ScrFIB [Peptostreptococcus anaerobius 653-L]
Length = 329
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 81 DLLMHGSPCQDFSRSGLKKGGTKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDK 140
Query: 111 RSRDLITSMLT---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R L R G+ + +L+ +FG+P R R ++++
Sbjct: 141 NMRASFFHYLKEMERLGYENKYEILNAIEFGIPQKRERIFVVS 183
>gi|172039658|ref|YP_001806159.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
gi|171701112|gb|ACB54093.1| putative site-specific DNA-methyltransferase [Cyanothece sp. ATCC
51142]
Length = 321
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ E V I + +YK + R L +EE +++PD+I+ PPCQ F+
Sbjct: 32 NWEPVVKIYQKNFKHPIYKWDLSRYEL--------YLEEFKSLNPDLIMGGPPCQDFSSA 83
Query: 70 GLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
G ++D R A S ++ I +P + +LENV F + ++L +AG+
Sbjct: 84 G-KRDENLGRGDLTIAFSQIVTQI--LP--KVFVLENVARFNKTNKYIEAKTILKQAGYG 138
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
E +L + GVP R R++ +
Sbjct: 139 ITEKVLDASLCGVPQKRKRFFWVG 162
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----SPDVILMSPPCQP 65
V+ ID + +A +K N + +I+ + +EIN + D+I+ PPCQ
Sbjct: 21 GFNVLLGIDNDKAALETFKLNHKNSKTICGDIREITFDEINNVIGNKKIDLIVGGPPCQG 80
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG----FEGSRSRDLITSMLT 121
+ +G +K D R I + I + ++ENV G F+G + +D I +
Sbjct: 81 MSLSGPRK-FEDPRNELYLSFIRLVKEIQP-KAFVIENVPGLVSLFKG-KIKDSIIEKFS 137
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLK 179
G++ + ++ + +GVP SR R + + E + T +++LP L+
Sbjct: 138 EMGYKVRFEIMCASDYGVPQSRKRVIFVGHQDKEFEFPEKMNTYVTCEMALSDLPPLE 195
>gi|427713414|ref|YP_007062038.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
gi|427377543|gb|AFY61495.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 6312]
Length = 323
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
L+ V + DI++ A Y NF P++++ +IE + D++ PCQ
Sbjct: 26 GIDLKWVFSCDIDSHAQQTYFENFEDYPQSDIT-------TIESKDIPDHDLLFAGFPCQ 78
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLT 121
PF+ G K D+R T L + I I +LENVK G ++ I +L
Sbjct: 79 PFSICGDLKGFEDSRGT-LFFEIARILREKRPVAFVLENVKQLVGHNHGKTLRRILDILH 137
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
G+ +L+ FG+P+ R R +++ R P
Sbjct: 138 EIGYFADYKVLNGLDFGIPHKRERIFIVGFREP 170
>gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 308
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 13 VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQ 72
++ A D+ A Y+ N ++ ++I + E+ D+I+ PCQ F+ ++
Sbjct: 24 IIWANDVYEDAVKTYRMNIG-DHILCKDISQVTTAEVP--DSDIIIGGFPCQGFSVANIK 80
Query: 73 KDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFRFQE 129
++I+D R T +L+ + A + L ENVKG +I +L G+ Q
Sbjct: 81 RNISDERNTLYKHLLRVVSA-KQPKFFLAENVKGILSLGKGHVIQMILNDFENIGYTMQL 139
Query: 130 FLLSPTQFGVPNSRTRYYLIAKRS---------PAAHSSEASFC---FETSSELMTELP 176
LL+ +GVP +R R ++ R A HS E + + + E + LP
Sbjct: 140 KLLNAADYGVPQTRQRVFIAGVRKDLDVIFTYPDATHSCEGTGGLKKWRSVGEALAGLP 198
>gi|420455645|ref|ZP_14954472.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393071599|gb|EJB72382.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 319
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + +R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQMLNSADFQLAQNRERLYIVGFRKDLKH 170
>gi|313201769|ref|YP_004040427.1| modification methylase [Methylovorus sp. MP688]
gi|312441085|gb|ADQ85191.1| putative modification methylase [Methylovorus sp. MP688]
Length = 378
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP- 61
RL+ ++ V A DI T A VY F + L +I+ F ++I PD L++
Sbjct: 14 RLACDNKNIRTVFANDIKTLACDVYASQFGTSVLHRGDIKDF-FDKI----PDHDLLTAG 68
Query: 62 -PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLIT 117
PCQPF+ G ++ I D R T +++T+ + +LENVK E I
Sbjct: 69 FPCQPFSSAGKKEGIRDPRGTLFQSIVKTLDK-NKPKYFILENVKRLLSMENGEHFATIL 127
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L+ G+ + L++ FG+P +R R ++ R
Sbjct: 128 QELSTLGYCVEWRLINAIHFGLPQNRQRLFITGIRD 163
>gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
Length = 417
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V A +I+ S+Y+ NF P ++R ++ + DV+ PCQPF+
Sbjct: 29 QCVFASEIDGDLASLYERNFGLRPVGDIRKVDVN-------HVPKHDVLCAGFPCQPFSS 81
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSL---QCLLLENVKGF---EGSRSRDLITSMLTR 122
G ++ A+C LI + I + +LLENV + + S L R
Sbjct: 82 AGKKQG---AKCPKSGRLINEVLRIVEFHHPEYILLENVPQIITIQNGEFWKHVNSSLAR 138
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
G+ + SP QFG+P +R R +++A + A
Sbjct: 139 LGYHVTYKIYSPKQFGIPQNRERVFVVASKRHA 171
>gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 698
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 42/246 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSP-DVIL 58
L H + +V+ A DI + ++H+F +L R + + E++N +I
Sbjct: 66 LGLHRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIA 125
Query: 59 MSPPCQPFTR-----------TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF 107
PPCQPF+R + +++ + R I + + + L+ENV
Sbjct: 126 GGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKP-KAFLMENVTDI 184
Query: 108 EGSRSRDLITSMLTRA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKR----------SP 154
+ +++ S++ RA G+R L+ Q+GVP R R ++ + P
Sbjct: 185 AQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMKWPKP 244
Query: 155 AAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGD---LYRRYLV 211
S E + T E +++LP LK + + G P D L R +L
Sbjct: 245 KYDSLEEAV---TLDEAISDLPPLKGGWDEKWDEKYSYEG------PKNDYQKLMRNWLD 295
Query: 212 SDKDLL 217
D +++
Sbjct: 296 IDDEMI 301
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE---INAMSPDVILMSPPCQPFTRTG 70
+ A + + S Y N P T + +I S +E+ DV++ PPCQ +++ G
Sbjct: 27 IVANEFDKSIAYSYSKNHPFTKMIVGDITSLELEKEFLQYKNKVDVVVGGPPCQGYSQKG 86
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGFR 126
+K I D R Y ++ + + S ++ENV +G ++LIT + G+
Sbjct: 87 SRKTIHDERNFLFKYFVKVVELV-SPNYFVMENVPNLLTAEKGFFKQELIT-LFEELGYS 144
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ ++FGVP R R ++ K+
Sbjct: 145 LSMEIVDASKFGVPQRRRRAIILGKKG 171
>gi|163848465|ref|YP_001636509.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus
J-10-fl]
gi|222526394|ref|YP_002570865.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl]
gi|163669754|gb|ABY36120.1| C-5 cytosine-specific DNA methylase [Chloroflexus aurantiacus
J-10-fl]
gi|222450273|gb|ACM54539.1| C-5 cytosine-specific DNA methylase [Chloroflexus sp. Y-400-fl]
Length = 322
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 8 AFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-----DVILMSPP 62
A +++ D A V++ NFP ++ S +I+ D+IL SP
Sbjct: 22 AAGIDIAAGFDKWALAGQVFQDNFPEARFYNVDLAILSRRQIHHFHETIGHVDLILASPE 81
Query: 63 C--QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML 120
C R KD A R LS+ + + + +++ENV F ++
Sbjct: 82 CTSHSVARGASPKDKASLR---LSWNVWRFAEVFQPRWVVVENVPAFRLWEHYRHFLEIM 138
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
R+G+R E +L + FGVP R R YL+ R
Sbjct: 139 QRSGYRVLEQMLVASAFGVPQRRRRLYLLFDR 170
>gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 437
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGL 71
E V +I A V K N P +RG +I EI D +L PCQ F+ G
Sbjct: 35 ECVFTSEIKPHAVEVLKQNHPNETVRG-DITKIETAEIPDF--DFLLGGFPCQAFSAAGK 91
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF----------EGSRSRDLITSMLT 121
+ D R T L + +E I + +LENV+G + R+ I LT
Sbjct: 92 RLGFEDTRGT-LFFEVERILRDKKPKGFILENVEGLVNHDRQNPKDKMGRTLSTILEHLT 150
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G++ +L+ FGVP R R Y+
Sbjct: 151 ALGYKVNWKVLNAKNFGVPQDRKRIYITG 179
>gi|319412045|emb|CBY91978.1| C-5-cytosine-specific DNA methylase [Streptococcus pneumoniae]
Length = 452
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFP-RTNLRGRNIQSFSIEEINAMSP--DVILM 59
RL + E + +I+ A YK F + R+I+ S +E + DVI
Sbjct: 14 RLGMESVRHECIGFCEIDKFARKSYKSFFQTEGEIEFRDIRDVSDDEFKKLRGKVDVICG 73
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGF---EGSRSRD 114
PCQ F+ G + D R T E A +Q L LENVKG + R+
Sbjct: 74 GFPCQAFSIAGRRLGFEDTRGT---LFFEIARAAKQIQPRFLFLENVKGLLNHDKGRTFT 130
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L GF + +L+ FGVP +R R ++I
Sbjct: 131 TILTTLDELGFDVEWQVLNSKDFGVPQNRERVFIIG 166
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 19/193 (9%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DVILMSPPC 63
EV+ +D A + N P+ + +I+ ++ E + DVI+ PPC
Sbjct: 22 QFEVLLGLDKKDVATETFDRNHPKAEVVNGDIRKWTPERTTQHTGVYPDDVDVIVGGPPC 81
Query: 64 QPFT--RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT 121
Q F+ R D+ D R S IE + ++ENV G D I+ +L
Sbjct: 82 QGFSSIRPDRGDDVEDERNGLYSDFIEYVSHY-EPDFFIMENVVGLATHEDGDTISQILE 140
Query: 122 RA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF---CFETSSELMTEL 175
A G+ +L+ FG+P R R +I AA + F + + +
Sbjct: 141 DAKNIGYSADWRILNGANFGLPQRRERLIMIG----AADEQDIEFPEPTHQANGRTIGYR 196
Query: 176 PKLKANTCNPLLS 188
K K T P LS
Sbjct: 197 DKTKVITTQPTLS 209
>gi|420862214|ref|ZP_15325610.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0303]
gi|420866799|ref|ZP_15330186.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|420876102|ref|ZP_15339478.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|421046449|ref|ZP_15509449.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0116-S]
gi|392067577|gb|EIT93425.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|392075130|gb|EIU00964.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|392077375|gb|EIU03206.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0303]
gi|392235902|gb|EIV61400.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0116-S]
Length = 331
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
+ L H + A++I A + N P + +++ S E+ + D++
Sbjct: 16 GQSLGLHLAGFDHELAVEIEPDACQTLRQNMPTWEIHEGDVREISGEKYRGI--DLLAGG 73
Query: 61 PPCQPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRD 114
PC PF+ G Q D R AL + E P + ++LENV+G ++ R+
Sbjct: 74 VPCPPFSIAGKQLGEDDERDLFPEALRLVEEARP-----KAVMLENVRGLSTAKFQTYRN 128
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ +L+ ++FGVP R R+ L+A
Sbjct: 129 SIRASLEDLGYKSDWQVLNASEFGVPQLRPRFILVA 164
>gi|418111331|ref|ZP_12748336.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41538]
gi|353786388|gb|EHD66799.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41538]
Length = 396
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 53 SPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EG 109
S D+I PCQ F+ G ++ D R T L + I +I + L LENVKG E
Sbjct: 50 SVDIICGGFPCQAFSIAGNRRGFEDTRGT-LFFEIARFASILRPKYLFLENVKGLLNHEN 108
Query: 110 SRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSS 169
+ + I S L G+ + +L+ FGVP +R R ++I S F +
Sbjct: 109 GVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRERVFIIGHLRGG--SGRKVFPLSREN 166
Query: 170 ELMTELPKLKANTCNPLLSRM 190
+ ++ +K NP + M
Sbjct: 167 QSISNQSVVKIGNVNPSGNGM 187
>gi|389689249|ref|ZP_10178587.1| DNA-methyltransferase Dcm [Microvirga sp. WSM3557]
gi|388590160|gb|EIM30445.1| DNA-methyltransferase Dcm [Microvirga sp. WSM3557]
Length = 375
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 7 HAFSLE---VVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----SPDVILM 59
H F LE V +D++ ++HN +R +++ S E+ + P +++
Sbjct: 46 HGFRLEGFMVAAGVDVDEDCRYAFEHNNSAPFIR-KDVTSLRASELRELFYKGEPTILVG 104
Query: 60 SPPCQPFTRTGLQKDIADARCTAL--SYLIETIPAIPSLQCL--LLENVKGFEGSRSRDL 115
PCQPF+ + D R + +++T+P + S++ + LL+ F+ +
Sbjct: 105 CAPCQPFSTYNQKNDDPKWRLVERFGNLIVKTLPDVVSMENVPRLLD----FQDGKVFKK 160
Query: 116 ITSMLTRAG-FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF---CFETSSEL 171
LT AG F + + + P +G+P R+R L+A R E + T E
Sbjct: 161 FVRKLTNAGYFVYHDVVFLP-DYGLPQRRSRLVLLASRHGEIELEEPQVEPDEYVTVEET 219
Query: 172 MTELPKLKANTCNP 185
+ LPKL A +P
Sbjct: 220 IGGLPKLTAGASDP 233
>gi|386747437|ref|YP_006220645.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384553679|gb|AFI05435.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 309
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E++ A +++ A + Y+ NF + L ++I+S + E+ + ++I PCQ F+
Sbjct: 21 GFEILWANELDKDACNTYRTNF-KHKLLEQDIKSLNPNELENV--ELISAGFPCQAFSIA 77
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
GLQK + D R + L I A Q LLLENVK + +LI L G+
Sbjct: 78 GLQKGLNDERGAIVMELFRIIQA-KKPQVLLLENVKNLARHNKGETLNLILETLKNLGYF 136
Query: 127 FQEFLLSPTQFG-VPNSRTRYYLIA 150
+L+ ++ +P +R R Y++
Sbjct: 137 VYYKILNTYEYSTIPQNRERIYIVG 161
>gi|434398940|ref|YP_007132944.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428270037|gb|AFZ35978.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 446
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
+I A + Y+ NF + G ++ S EI D++L PCQPF+ G ++ D
Sbjct: 39 EIKEHAITTYQENFSVNKIYG-DLTKISNVEIPDF--DILLAGFPCQPFSSAGTRQGFLD 95
Query: 78 ARCTALSYLIETIPAIPSLQCLLLENVKGF-EGSRSRDL--ITSMLTRAGFRFQEFLLSP 134
R T L + IE I LLENV+G + R R L I + L + + +L+
Sbjct: 96 TRGT-LFFEIEKILQAKQPFGFLLENVEGLVKHDRGRTLGTILNKLEQLDYHVTWKVLNA 154
Query: 135 TQFGVPNSRTRYYLIA-KRSPAA 156
FG+P R R Y+ K+ P +
Sbjct: 155 KNFGIPQDRKRIYIAGNKKHPIS 177
>gi|420415610|ref|ZP_14914723.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393031515|gb|EJB32586.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 318
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLISHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|108563484|ref|YP_627800.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
gi|107837257|gb|ABF85126.1| type II DNA modification enzyme [Helicobacter pylori HPAG1]
Length = 313
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + Y I I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLISHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|392397895|ref|YP_006434496.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528973|gb|AFM04703.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 332
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 12/178 (6%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMSPPCQPFTRT 69
V +IDI S YKHNF L ++I S EI + DV++ PPCQ F+
Sbjct: 29 VFSIDIEPSFCETYKHNFANHQLVEKDICDLSDSEIKYLKEFDEIDVVIGGPPCQGFSIA 88
Query: 70 G--LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G +K + D R + + + + ++ENV +R+ I + G
Sbjct: 89 GNIGRKFVDDPRNRLFKEFVRIVKVVKP-KFFVMENVARLYTHNKGATRNEIIKDFEKLG 147
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS--PAAHSSEASFCFETSSELMTELPKLKA 180
++ +L+ +GVP R R I + + + + E +++ PKLK+
Sbjct: 148 YKVDCKILNSADYGVPQVRKRVIFIGTSTNQKIEFPQQEVENYVSVKEALSKYPKLKS 205
>gi|301328257|ref|ZP_07221377.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
gi|300845286|gb|EFK73046.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 78-1]
Length = 341
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD----VILMSPPCQP 65
L+VV ID+ Y+ N ++ ++I + EE+ + D V+ PCQP
Sbjct: 24 GLDVVAGIDLEGECRFPYERN-NKSKFIEQDIAKVTKEELLRLYGDASVKVLAGCAPCQP 82
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F++ KD AD + L Y E + S + + +ENV + + + L + G+
Sbjct: 83 FSKYTQGKDKADDKKWPLLYEFERLIREVSPEIVTMENVPDVTKHKVYNDFYNSLLKLGY 142
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH-SSEASFCFETSSELMTELPKLKANTCN 184
+ ++G+P +R+R+ L+A + A +T + + LP L+ +
Sbjct: 143 YVWASKVDCVEYGIPQNRSRHVLLASKLGAIELVKRDDVILKTVRDAIGNLPPLEDGQTD 202
Query: 185 P 185
P
Sbjct: 203 P 203
>gi|450232589|ref|ZP_21898222.1| C-5 cytosine-specific DNA methylase [Escherichia coli O08]
gi|449311828|gb|EMD02150.1| C-5 cytosine-specific DNA methylase [Escherichia coli O08]
Length = 340
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD----VILMSPPCQP 65
L+VV ID+ Y+ N ++ ++I + EE+ + D V+ PCQP
Sbjct: 23 GLDVVAGIDLEGECRFPYERN-NKSKFIEQDIAKVTKEELLRLYGDASVKVLAGCAPCQP 81
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGF 125
F++ KD AD + L Y E + S + + +ENV + + + L + G+
Sbjct: 82 FSKYTQGKDKADDKKWPLLYEFERLIREVSPEIVTMENVPDVTKHKVYNDFYNSLLKLGY 141
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH-SSEASFCFETSSELMTELPKLKANTCN 184
+ ++G+P +R+R+ L+A + A +T + + LP L+ +
Sbjct: 142 YVWASKVDCVEYGIPQNRSRHVLLASKLGAIELVKRDDVILKTVRDAIGNLPPLEDGQTD 201
Query: 185 P 185
P
Sbjct: 202 P 202
>gi|68075627|ref|XP_679733.1| modification methylase-like protein [Plasmodium berghei strain
ANKA]
gi|56500547|emb|CAH94597.1| modification methylase-like protein, putative [Plasmodium berghei]
Length = 689
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 99 LLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +ENVK FE S S + + + + FQ +LLSP QFG+PN R R+Y I KR
Sbjct: 281 IFIENVKNFESSFSFLYFINSI-KNNYNFQTYLLSPLQFGIPNERLRFYCICKR 333
>gi|420460603|ref|ZP_14959401.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393076560|gb|EJB77312.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 321
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I + D ++ P
Sbjct: 17 RLGLEQCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDALVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ +I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKIIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + R R Y++ R H
Sbjct: 133 LQEAGYTAYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|12084381|pdb|1FJX|A Chain A, Structure Of Ternary Complex Of Hhai Methyltransferase
Mutant (T250g) In Complex With Dna And Adohcy
gi|85544394|pdb|2C7R|A Chain A, Hhai Dna Methyltransferase (T250g Mutant) Complex With
Oligonucleotide Containing 2-Aminopurine As A Target
Base (Gpgc:gmgc) And Sah
Length = 327
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + E V + + + A VY+ NF P ++ + E D++
Sbjct: 25 RLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDIT-------QVNEKTIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G QK D+R T L + I I + + +ENVK F + + +++
Sbjct: 78 GFPCQAFSISGKQKGFEDSRGT-LFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + + F +L+ +G+P R R Y+I R+
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRN 173
>gi|387773675|ref|ZP_10128965.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
gi|127455|sp|P05102.1|MTH1_HAEPH RecName: Full=Modification methylase HhaI; Short=M.HhaI; AltName:
Full=Cytosine-specific methyltransferase HhaI
gi|1065144|pdb|1MHT|A Chain A, Covalent Ternary Structure Of Hhai Methyltransferase, Dna
And S-Adenosyl-L-Homocysteine
gi|1942412|pdb|3MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Unmodified Dna And Adohcy
gi|1942415|pdb|4MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Native
Dna And Adohcy
gi|2392799|pdb|5MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With
Hemimethylated Dna And Adohcy
gi|3660437|pdb|6MHT|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Dna Containing 4'-Thio-2'deoxycytidine At The Target
gi|4139672|pdb|7MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139675|pdb|8MHT|A Chain A, Cytosine-Specific Methyltransferase HhaiDNA COMPLEX
gi|4139680|pdb|9MHT|A Chain A, Cytosine-specific Methyltransferase Hhai/dna Complex
gi|4558252|pdb|10MH|A Chain A, Ternary Structure Of Hhai Methyltransferase With Adohcy
And Hemimethylated Dna Containing
5,6-Dihydro-5-Azacytosine At The Target
gi|4699814|pdb|2HMY|B Chain B, Binary Complex Of Hhai Methyltransferase With Adomet
Formed In The Presence Of A Short Nonpsecific Dna
Oligonucleotide
gi|24158912|pdb|1M0E|A Chain A, Zebularine: A Novel Dna Methylation Inhibitor That Forms A
Covalent Complex With Dna Methyltransferase
gi|52695513|pdb|1SKM|A Chain A, Hhai Methyltransferase In Complex With Dna Containing An
Abasic South Carbocyclic Sugar At Its Target Site
gi|85544385|pdb|2C7O|A Chain A, Hhai Dna Methyltransferase Complex With 13mer
Oligonucleotide Containing 2-Aminopurine Adjacent To The
Target Base (Pcgc:gmgc) And Sah
gi|85544388|pdb|2C7P|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Opposite To The Target Base (
Gcgc:gmpc) And Sah
gi|85544391|pdb|2C7Q|A Chain A, Hhai Dna Methyltransferase Complex With Oligonucleotide
Containing 2-Aminopurine Outside The Recognition
Sequence (Paired With G) And Sah
gi|116667789|pdb|2HR1|A Chain A, Ternary Structure Of Wt M.hhai C5-cytosine Dna
Methyltransferase With Unmodified Dna And Adohcy
gi|157831356|pdb|1HMY|A Chain A, Crystal Structure Of The Hhai Dna Methyltransferase
Complexed With S- Adenosyl-L-Methionine
gi|290560089|pdb|3EEO|A Chain A, M. Hhai Co-Crystallized With Synthetic Dsdna Containing A
Propane Diol In Place Of The Deoxycytidine Residue
Targeted For Methylation.
gi|148949|gb|AAA24989.1| DNA methylase [Haemophilus haemolyticus]
gi|386904416|gb|EIJ69210.1| modification methylase HhaI [Haemophilus parahaemolyticus HK385]
Length = 327
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + E V + + + A VY+ NF P ++ + E D++
Sbjct: 25 RLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDIT-------QVNEKTIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ +G QK D+R T L + I I + + +ENVK F + + +++
Sbjct: 78 GFPCQAFSISGKQKGFEDSRGT-LFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + + F +L+ +G+P R R Y+I R+
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRN 173
>gi|428318060|ref|YP_007115942.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241740|gb|AFZ07526.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 345
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPF 66
+ V + +IN+ VY NF I +IN + DV++ PCQPF
Sbjct: 21 GFKCVFSCEINSKCRQVYTDNFGEVPFG-------DISKINPVELEDFDVLVAGFPCQPF 73
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRA 123
+ G + D R T L + I I I + ++LENVK + + +I + L
Sbjct: 74 SICGKKLGFEDTRGT-LFFDICKIIKIKQPKVIVLENVKHLIHHDKGNTLKVIIASLEDL 132
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTEL-PKLK 179
G+ +L+ FG+P R R ++I A E +F S L T+L PKL+
Sbjct: 133 GYSVNYKMLNAKDFGIPQHRERIFII-----ATQGKEFNF-----SRLQTQLTPKLR 179
>gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 317
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 69 DLLMHGSPCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDK 128
Query: 111 RSRDLITSMLT---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R L R G+ + +L+ FG+P R R ++++
Sbjct: 129 NMRASFFHYLKEMERLGYENKYEILNAMDFGIPQKRERIFVVS 171
>gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus
marinus clone ASNC1092]
Length = 686
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 42/246 (17%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFP----RTNLRGRNIQSFSIEEINAMSP-DVIL 58
L H + +V+ A DI + ++H+F +L R + + E++N +I
Sbjct: 66 LGLHRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIA 125
Query: 59 MSPPCQPFTR-----------TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF 107
PPCQPF+R + +++ + R I + + + L+ENV
Sbjct: 126 GGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKP-KAFLMENVTDI 184
Query: 108 EGSRSRDLITSMLTRA---GFRFQEFLLSPTQFGVPNSRTRYYLIAKR----------SP 154
+ +++ S++ RA G+R L+ Q+GVP R R ++ + P
Sbjct: 185 AQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMKWPKP 244
Query: 155 AAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGD---LYRRYLV 211
S E + T E +++LP LK + + G P D L R +L
Sbjct: 245 KFDSVEEAV---TLDEAISDLPPLKGGWDEKWDEKYSYEG------PKNDYQKLMRDWLD 295
Query: 212 SDKDLL 217
D +++
Sbjct: 296 IDDEMI 301
>gi|428773133|ref|YP_007164921.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428687412|gb|AFZ47272.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 340
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
I E + S D++ PCQ F+ +G Q D R T L + + I + +LLENV
Sbjct: 58 KIPEFDIPSHDLLCAGFPCQAFSISGKQLGFNDTRGT-LFFDVARIVNYHQPKFILLENV 116
Query: 105 KGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
K F + + +++ + L G++ +L+ + FGVP R R Y++A R
Sbjct: 117 KNFARHDHGNALNIVVNTLDEIGYKVYYQVLNSSYFGVPQKRERIYIVAFRK 168
>gi|420988806|ref|ZP_15451962.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0206]
gi|421037799|ref|ZP_15500810.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0116-R]
gi|392183085|gb|EIV08736.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0206]
gi|392226013|gb|EIV51527.1| cytosine-specific methyltransferase [Mycobacterium abscessus
4S-0116-R]
Length = 324
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 1 AERLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMS 60
+ L H + A++I A + N P + +++ S E+ + D++
Sbjct: 9 GQSLGLHLAGFDHELAVEIEPDACQTLRQNMPTWEIHEGDVREISGEKYRGI--DLLAGG 66
Query: 61 PPCQPFTRTGLQKDIADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRD 114
PC PF+ G Q D R AL + E P + ++LENV+G ++ R+
Sbjct: 67 VPCPPFSIAGKQLGEDDERDLFPEALRLVEEARP-----KAVMLENVRGLSTAKFQTYRN 121
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ +L+ ++FGVP R R+ L+A
Sbjct: 122 SIRASLEDLGYKSDWQVLNASEFGVPQLRPRFILVA 157
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHN---FPRTNLRG--RNIQSFSIEE-INAMSPDVILMSPPC 63
E++ AIDI+ A++ + +N + + G R + I + + S D++ PPC
Sbjct: 26 GFELIHAIDIDQDASATFANNREGWSPEEIIGDIREVDKSEIHDTVGRNSVDLVAGGPPC 85
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSML 120
Q F+ + D +D R I+ + + Q L ENV+G + + D +
Sbjct: 86 QGFSEV-VSPDGSDERNHLFVNFIDWVDELEP-QAALFENVRGIQNTAEGKFLDAVNDSF 143
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
G+ +++ + FGVP R R L+A + H F
Sbjct: 144 ANIGYNVTHRVVTSSDFGVPQHRRRVVLLATKDSLKHQPLGGF 186
>gi|425443961|ref|ZP_18824024.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9443]
gi|389732668|emb|CCI03436.1| Modification methylase HindV (modular protein) [Microcystis
aeruginosa PCC 9443]
Length = 382
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 13 VVTAIDINTSANSVYKHNF--PRTNLRGRNIQSFSIEEINAM-SPDVILMSPPCQPFTRT 69
+V A D A VY++NF P N+ ++ S +EI A +P++I+ SPPCQ F+
Sbjct: 119 IVAAFDNWIPAIDVYRNNFSHPIFNV---DLSRESNQEILAQYNPEIIVGSPPCQDFSSA 175
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G +++ R E + + S Q ++ENV E S+ + G+
Sbjct: 176 G-KRNEGLGRANLTLTFAEIVTRV-SPQWFVMENVDRIEKSKILIQAKQIFKSHGYGLTG 233
Query: 130 FLLSPTQFGVPNSRTRYYLIAK 151
+++ GVP +R RY+LI K
Sbjct: 234 KVINSCYCGVPQTRKRYFLIGK 255
>gi|407473320|ref|YP_006787720.1| modification methylase Sau96I [Clostridium acidurici 9a]
gi|407049828|gb|AFS77873.1| modification methylase Sau96I [Clostridium acidurici 9a]
Length = 429
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 17 IDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI-----NAMSPDVILMSPPCQPFTRTGL 71
++I+ A+ + N P N+ ++I S + I N + D++ PCQ F+ G
Sbjct: 127 VEIDRFASETLRKNRPHWNVIEKDIVKVSEDGIRKYIDNDIEIDLLSGGYPCQTFSYAGN 186
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQ 128
+K + D R T Y + + + + L ENVKG + R+ + + + G++ Q
Sbjct: 187 KKGLEDTRGTMFYYYAQILDQLKP-KVFLAENVKGLVSHDNGRTLQTMIDVFSELGYKIQ 245
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKRS 153
+L +GV R R ++ R
Sbjct: 246 WKVLKALDYGVAQKRERIVIVGIRK 270
>gi|325285907|ref|YP_004261697.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
gi|324321361|gb|ADY28826.1| DNA-cytosine methyltransferase [Cellulophaga lytica DSM 7489]
Length = 414
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ V +I+ A + N P N+ +I+SF+ E N D++ PCQ F+
Sbjct: 95 GIKCVALNEIDKWACQTLRENRPHWNVLEGDIKSFNFSEYNNQV-DIVTGGFPCQAFSYA 153
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
G + + DAR T + + L C + ENVKG E ++ + + S+L G+
Sbjct: 154 GKKLGLQDARGTLFYEFARAVKEVNPLIC-IGENVKGLLSHEKGKTIEGMISILDEIGYN 212
Query: 127 FQEF-LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+L + VP R R L+ R E L+ L K + CN
Sbjct: 213 VVPVKVLKAINYKVPQKRERVILVGVRKDIDIKYEYPKPHNKIYNLIDALKKGELYNCN 271
>gi|127417|sp|P25262.1|MTB1_HERAU RecName: Full=Modification methylase HgiBI; Short=M.HgiBI; AltName:
Full=Cytosine-specific methyltransferase HgiBI
gi|43478|emb|CAA38927.1| methyltransferase [Herpetosiphon aurantiacus]
Length = 437
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL A V + +I+ A VY+ N+P + +I+++ A DV++ P
Sbjct: 17 RLGLEAVGGVCVASAEIDQQAIKVYRQNWPTDGVDHNLGDITAIQQLPAH--DVLVGGVP 74
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSM 119
CQP++ G + D R + +I + I + + ENVKG R+R ++I
Sbjct: 75 CQPWSIAGKNQAFDDPRGQLWADVIRLV-QINQPKAFIFENVKGLVDPRNRLCLEIILDS 133
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+ LL+ FGV +R R +++
Sbjct: 134 FKDLGYSVFYKLLNSFDFGVAQNRDRVFIVG 164
>gi|410638483|ref|ZP_11349044.1| DNA (cytosine-5-)-methyltransferase [Glaciecola lipolytica E3]
gi|410141892|dbj|GAC16249.1| DNA (cytosine-5-)-methyltransferase [Glaciecola lipolytica E3]
Length = 420
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
D++L PCQPF+ GL+ I D R T L + I I + LLENVKG +
Sbjct: 157 DILLAGFPCQPFSHAGLKLGIEDTRGT-LFHDIANILETKKPKFALLENVKGLISHDKGY 215
Query: 112 SRDLITSMLTRAGFR-------------------FQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ +I LT+ G+ +E +L FG+P +R R Y++ R
Sbjct: 216 TLKVILKTLTKMGYSCNIPKSVIEHGSTKEIQALAKEMVLKSVDFGIPQNRQRIYIVLWR 275
Query: 153 SPAAHSSE 160
S E
Sbjct: 276 DGEVKSFE 283
>gi|228472108|ref|ZP_04056874.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis
ATCC 33624]
gi|228276311|gb|EEK15035.1| cytosine-specific methyltransferase NlaX [Capnocytophaga gingivalis
ATCC 33624]
Length = 367
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + F+ + ID AN YK+NFP G +I + +I D+I PCQ
Sbjct: 20 AGYQFTEHYFSEIDKQAIAN--YKYNFPHAKYIG-DITTLQPADI--AGADIITFGSPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKGF----EGSRSRDLITSM 119
F+ G + + + + + + I I + PS+ + ENVKG G+ +I +
Sbjct: 75 DFSLAGKRAGLKGNKSSLIQHAIALITHVRPSI--FIWENVKGAYSSNAGADFWAIIKAF 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLI---AKRS-PAAHS-SEASFCFETSSELMTE 174
G+RF++ LL+ T++ +P +R R Y I A RS P E F F +E +
Sbjct: 133 AYIDGYRFEQQLLN-TKWLLPQNRERIYFIGHLAGRSIPGVFPIGENDFPFTKETESQLQ 191
Query: 175 LP 176
P
Sbjct: 192 AP 193
>gi|448336037|ref|ZP_21525152.1| DNA-cytosine methyltransferase [Natrinema pallidum DSM 3751]
gi|445630929|gb|ELY84188.1| DNA-cytosine methyltransferase [Natrinema pallidum DSM 3751]
Length = 735
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 40/215 (18%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMS--------PDVILMSPPC 63
++ AIDI+T A + Y+ N P + RN+ + E++ + PD+++ PPC
Sbjct: 327 DIRWAIDIDTDAVATYRLNHP--EIPHRNVVCGDVREVDLTTRIQEAVNEPDLLVGGPPC 384
Query: 64 QPF------TRTGLQKD---IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGS---- 110
Q +R G +D + D R T + ++ + + + +++ENV+G
Sbjct: 385 QSLSNAGYRSRRGDDEDYSILDDDRTTLYTQYVKAVEEL-RPKAIVMENVEGMVNEVGDT 443
Query: 111 --RSRDLITSML-----TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
R D + L T G+ + L T+ G+P R R LI R S+ A
Sbjct: 444 DIRVIDWVIEDLEMLSETGPGYDVEYKLQDMTELGIPQKRERVLLIGIRDDLTESATADD 503
Query: 164 CF-ETSSELMTE--------LPKLKANTCNPLLSR 189
E S E T+ LP+L+ LL R
Sbjct: 504 MLNELSIEGKTQSIQQGLSGLPRLRRGEGGRLLPR 538
>gi|420399189|ref|ZP_14898396.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393011380|gb|EJB12567.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 313
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYRILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 73/185 (39%), Gaps = 16/185 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE------INAMSPDVILMSPPC 63
V+ D + A + P G IQ + ++ + DVI+ PPC
Sbjct: 27 GFHVLAGQDYDDRAGETFSATHPEAKFIGGPIQDVTAQQLLKAAGVKKGEIDVIVGGPPC 86
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM---L 120
Q ++ Q+ + D R + + I + +++ENV G ++ + +
Sbjct: 87 QGYSVYNHQRGVNDPRAGLFREYLRIVKGI-QPRWIVMENVTGITSIGGGGIVHEIFEGM 145
Query: 121 TRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS------PAAHSSEASFCFETSSELMTE 174
G+R +L ++GVP R R + IA R+ P F T + +++
Sbjct: 146 KSLGYRVDMKVLRAEEYGVPQERRRVFFIATRTDAPILFPEQTHGPGLLPFVTVWDAISD 205
Query: 175 LPKLK 179
LPKL+
Sbjct: 206 LPKLE 210
>gi|317506898|ref|ZP_07964670.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
gi|316254826|gb|EFV14124.1| C-5 cytosine-specific DNA methylase [Segniliparus rugosus ATCC
BAA-974]
Length = 331
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDI 75
A++I+ A + + N P ++ +++ + E + D++ PC PF+ G Q
Sbjct: 33 AVEIDKDAAATLQLNRPSWDVHEGDVREVNGREYKGV--DLLAGGVPCPPFSIAGKQLGA 90
Query: 76 ADAR---CTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRFQE 129
D R A+ + E PA ++LENVKG +R R I L G+
Sbjct: 91 DDERDLFPEAIRLVREARPA-----AVMLENVKGLASARFASYRQSIFEALDDMGYDADW 145
Query: 130 FLLSPTQFGVPNSRTRYYLIAKR 152
LL+ ++FGVP R R+ L+A +
Sbjct: 146 QLLNASEFGVPQLRPRFILVAMK 168
>gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
Length = 377
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
DI+ A Y+ NF + +I EI D++ PCQ F+ GLQK AD
Sbjct: 108 DIDKYAQVSYEANFGERPMG--DITKIEASEIPDF--DILFGGFPCQAFSICGLQKGFAD 163
Query: 78 ARCTALSYLIETIPAIPSLQCLLLENVKGF----EGSRSRDLITSMLTRAGFRFQEFLLS 133
L + I I Q +LENVK G + ++ + G+ LL+
Sbjct: 164 NTKGTLFFDIARIIKEKQPQAFVLENVKNLASHDNGKTLKTILEVLRDELGYHVDYKLLN 223
Query: 134 PTQFGVPNSRTRYYLIAKRSP 154
FG+P R R +I + P
Sbjct: 224 ALDFGLPQKRERIIIIGSKKP 244
>gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
Length = 340
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 10/188 (5%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIE----EINAMSPDVILMSPP 62
H + A +I+ A+ VYK N +T + +I++ S E E+ + ++ PP
Sbjct: 20 HKAGFQTELAFEIDELASKVYKLNHKKTKVITDDIRNISTENVKQELGNKTIHLLAGCPP 79
Query: 63 CQPFT---RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM 119
CQ F+ R + + D R + + + + ++ENV G +S
Sbjct: 80 CQGFSSIRRLNKPEPVKDDRNKLIKEFVRFVKELMPY-TFMMENVPGLALDKSFKSALKE 138
Query: 120 LTRAGFRFQEF-LLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKL 178
L AG+ ++ +++ +GVP SR R L+ R +E + +T +++ +LPK
Sbjct: 139 LENAGYYKPDWKIVNIKDYGVPQSRKRLVLVGSRLAPLRIAEPTKKKKTVRQVIGKLPK- 197
Query: 179 KANTCNPL 186
N+ +PL
Sbjct: 198 PENSMDPL 205
>gi|420430848|ref|ZP_14929874.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393045451|gb|EJB46434.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 318
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I+ + DV++ P
Sbjct: 17 RLGLERCHLKCVGHAEINHEALRTYELFFKDTHNFGNLMR---IDPNDLPDFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 133 LQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRK 166
>gi|419419078|ref|ZP_13959345.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori NCTC 11637 = CCUG 17874]
gi|384373035|gb|EIE28580.1| M.HpyAVIII, a type II cytosine specific DNA methyltransferase
[Helicobacter pylori NCTC 11637 = CCUG 17874]
Length = 313
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 15 TAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE--INAMSP---DVILMSPPCQPFTRT 69
A+DIN +K N P + L +IQ +I+E IN ++I+ PPCQ F+
Sbjct: 364 VALDINEKLAQTFKENIPESELIIGDIQDKAIKEKIINLSKKNKVNMIIGGPPCQGFSLK 423
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRS---RDLITSMLTRAG 124
G + + D R IE + + L+ L ++ENVK + + ++ I S + + G
Sbjct: 424 GKKLGLDDPRNFL---FIEYLHLVQELKPLVFVIENVKSLMSTSNGWFKNQIISEIKKLG 480
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRSPA 155
+ ++ + +GVP +R R + ++ A
Sbjct: 481 YEVSVGIVRASDYGVPQNRERVIFLCSKNKA 511
>gi|227500535|ref|ZP_03930589.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
gi|227217363|gb|EEI82692.1| possible DNA (cytosine-5-)-methyltransferase [Anaerococcus
tetradius ATCC 35098]
Length = 321
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y ++ ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGEDYKSKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ A T S L ETI I + + ++ ENVKG +D
Sbjct: 74 PCQDFSRIGKKQGGAKNSGTRSSLLFETIRIIKEMKEKPKWIIWENVKGVLDRNMKDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|420397354|ref|ZP_14896571.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393011773|gb|EJB12958.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 319
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|425438535|ref|ZP_18818879.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9717]
gi|389718092|emb|CCH97890.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9717]
Length = 464
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 60 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 118
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R+ LI LT G++ LL
Sbjct: 119 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLQLIIDELTSCGYQVYWQLL 177
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 178 NAYDFGLPQNRERVFIVGIRK 198
>gi|348590515|ref|YP_004874977.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347974419|gb|AEP36954.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|399116677|emb|CCG19485.1| cytosine-specific methyltransferase [Taylorella asinigenitalis
14/45]
Length = 333
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFT 67
L+ V A +I+++A Y NF + I +E+ A P D +L PCQ F+
Sbjct: 25 KLKTVYASEIDSNAVKTYVSNFSSKKI----IHGDVTKEVEADIPAHDFLLAGFPCQAFS 80
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
G + DAR T L + + I + + ENVK + + +I ++L G
Sbjct: 81 AAGRKMGFDDARGT-LFFDVARIIKFHKPKVVFAENVKNLVNHDKGTTFKIILNVLKELG 139
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ +L+ FGVP +R R Y++A R
Sbjct: 140 YEVFFQVLNSKNFGVPQNRERIYIVAFRE 168
>gi|390609414|gb|AFM22694.1| cytosine specific DNA methyltransferase [Helicobacter pylori ATCC
43504]
Length = 313
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|425454182|ref|ZP_18833928.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9807]
gi|389805203|emb|CCI15146.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9807]
Length = 459
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 59 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 117
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 118 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 176
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 177 NAYDFGLPQNRERVFIVGIRK 197
>gi|440753494|ref|ZP_20932697.1| modification methylase BanI [Microcystis aeruginosa TAIHU98]
gi|440177987|gb|ELP57260.1| modification methylase BanI [Microcystis aeruginosa TAIHU98]
Length = 456
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 52 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 110
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 111 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 169
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 170 NAYDFGLPQNRERVFIVGIRK 190
>gi|167761084|ref|ZP_02433211.1| hypothetical protein CLOSCI_03482 [Clostridium scindens ATCC 35704]
gi|167661318|gb|EDS05448.1| modification methylase HpaII [Clostridium scindens ATCC 35704]
Length = 405
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A +I+ Y+ N+ + G +I++ ++E + DV+ PCQ F++ G Q+
Sbjct: 47 VFASEIDKYCIETYQENYGMDS--GIDIRN--VDEKDIPPHDVLCAGFPCQAFSKAGKQE 102
Query: 74 DIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE- 129
+ D L + I I ++LENV+ + + +I + L + G+R E
Sbjct: 103 GMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHDHGNTWKVIRANLRKQGYRLMEK 162
Query: 130 -FLLSPTQFGVPNSRTRYYLIAKRSP 154
+LSP FGVP R R ++ K P
Sbjct: 163 PLILSPHHFGVPQLRERVVILGKYEP 188
>gi|385216324|ref|YP_005776281.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180853|dbj|BAJ58639.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 312
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|339753228|gb|AEJ93254.1| gp70 [Mycobacterium phage ShiLan]
Length = 389
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H F+ VV + +T+A V H +P G ++ + + + ++ + D++ PCQPF
Sbjct: 19 HVFNSHVVWQCEYDTAAAKVLAHRYPNIPNCG-DVTAINWDSLDRV--DILCGGYPCQPF 75
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFR 126
+ G +K D R Y E I I + ++LENV G S D + L G+
Sbjct: 76 SAAGQRKGTEDERHL-WPYFAEAIRRI-RPRYVVLENVAGHR-SMGFDTVLGDLASVGYD 132
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS 159
Q + + G P+ R R +++A S A+ ++
Sbjct: 133 AQWCSVRASDVGAPHRRERVFVLATPSDASDAT 165
>gi|255692343|ref|ZP_05416018.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM
17565]
gi|260621969|gb|EEX44840.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii DSM
17565]
Length = 297
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L +S E V +I +A + +K+NFP G ++ EI PD+I PC
Sbjct: 17 LQAAGYSFEKVYFSEIEKNAIANFKYNFPYAEHIG-SVTEIGTAEIG--HPDIITFGSPC 73
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR----DLITSM 119
Q F+ G + + + Y +E + + ENVKG ++ R +I +
Sbjct: 74 QNFSSVGDGSGLRGEASSLVRYAVEAVGRFRP-DVFIWENVKGVFFAKHRSDFWSIIKAF 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
G+R E+ L T + +P +R R YL+ +
Sbjct: 133 ADIGGYRL-EWQLFNTAWFLPQNRERIYLVGR 163
>gi|443658594|ref|ZP_21132178.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332903|gb|ELS47486.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
Length = 455
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 52 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 110
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 111 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 169
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 170 NAYDFGLPQNRERVFIVGIRK 190
>gi|78778033|ref|YP_394348.1| DNA (cytosine-5-)-methyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|78498573|gb|ABB45113.1| DNA (cytosine-5-)-methyltransferase., Type II site-specific
deoxyribonuclease [Sulfurimonas denitrificans DSM 1251]
Length = 657
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPR-------TNLRGRNIQSFSIEEINAMSPDVILM 59
H E V A +I+ A YK+NF + L +I++ EEI PD L+
Sbjct: 23 HELGGECVFASEIDIYARKTYKYNFKKYSPELFENGLFNEDIKTIMPEEI----PDFDLL 78
Query: 60 SP--PCQPFTRTGLQKDIADARCTA---LSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
PCQPF++ G + D + L + I I + + LENV+G +
Sbjct: 79 CAGFPCQPFSQAGKKYGFDDNHKSERGNLFFDIAEIIKVKRPKAFFLENVRGLVNHDNGN 138
Query: 112 SRDLITSMLTRA-GFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ I +LT G+ F ++ + +G+P R R ++I R
Sbjct: 139 TFKTIQHILTEELGYSFYHQIIKASDYGLPQLRPRTFMIGFRD 181
>gi|428311638|ref|YP_007122615.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428253250|gb|AFZ19209.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 411
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 12 EVVTAIDINTSANSVYKHNFP--RTNLRGRNIQSFSIEE--INAMSPDVILMSPPCQPFT 67
+++ ID N+ A + NFP + L +I S +++ IN D+++ PPCQ F+
Sbjct: 34 KILGGIDNNSHAIRTHHRNFPNCKFKLPALDISSLDLQKLPINPGEVDILIGGPPCQVFS 93
Query: 68 RTGL-------QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSML 120
R G+ +K D R Y ++ + L ++ENV +DL + +L
Sbjct: 94 RVGIGKMKSLGKKVEEDPRNFLYKYFVKCLQYYKPL-FFVMENVDAL--VLKKDLFSKIL 150
Query: 121 TR------------AGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+R Q +L+ + +GVP R R +++ R
Sbjct: 151 NSLELGLPRQRESFPGYRIQHSILNASNYGVPQVRQRLFIVGIRQ 195
>gi|425470152|ref|ZP_18849022.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9701]
gi|389884300|emb|CCI35387.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9701]
Length = 463
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 59 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 117
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 118 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 176
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 177 NAYDFGLPQNRERVFIVGIRK 197
>gi|386753049|ref|YP_006226268.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384559307|gb|AFH99774.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 312
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I I +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKIKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|374633108|ref|ZP_09705475.1| DNA-methyltransferase Dcm [Metallosphaera yellowstonensis MK1]
gi|373524592|gb|EHP69469.1| DNA-methyltransferase Dcm [Metallosphaera yellowstonensis MK1]
Length = 320
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPF 66
+V AI+++ SA Y NFP+T + +++ + +EI + PDV++ SPPC+PF
Sbjct: 24 GFDVKLAIELDHSAARTYSLNFPKTLVLEEDVRDVTGKEIVKLIGSEPDVVIGSPPCEPF 83
Query: 67 TRTG-------LQKDIADARCTALSYLIETIPAIPSL--QCLLLENVKGFEGSRS-RDLI 116
T L + D + S +E I I L + ++ENV +R R+ +
Sbjct: 84 TAANPLRLNNPLDRLYEDEKG---SLTLEFIRLIAELRPKIFVMENVPSIVETRELREAL 140
Query: 117 TSMLTRAGFR-FQEFLLSPTQFGVPNSRTRYYL 148
+ GF FLL+ +FG P+ R R ++
Sbjct: 141 IHEFRKEGFEPIFNFLLA-EEFGNPSRRARVFI 172
>gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific methyltransferase
HaeIII) [Prevotella melaninogenica D18]
gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific methyltransferase
HaeIII) [Prevotella melaninogenica D18]
Length = 336
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 5/150 (3%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPF 66
H + A + + ++ NFP T L +I + M+P I+ PPCQ +
Sbjct: 18 HNAGFRTIVANEFDKKICPTFRANFPDTKLIEGDIHDIPSDAF-PMNPVGIIGGPPCQSW 76
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLI---TSMLTRA 123
+ G K I DAR I + L + ENV G R + + ++ +A
Sbjct: 77 SEAGTLKGIEDARGQLFYEYIRILRDTQPL-FFVAENVPGMLAKRHTEAVRGFMNLFNQA 135
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
G+ +L+ F VP R R + I R
Sbjct: 136 GYDVNLKMLNANDFDVPEDRNRVFYIGFRK 165
>gi|420444143|ref|ZP_14943067.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393059022|gb|EJB59905.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 318
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|262283394|ref|ZP_06061160.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
gi|262260885|gb|EEY79585.1| cytosine-specific methyltransferase NlaX [Streptococcus sp.
2_1_36FAA]
Length = 460
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 21/217 (9%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF-PRTNLRGRNIQSFSIEEINAMSP-DVILMS 60
RL A + V +++ A YK F + +I+S E I + D++
Sbjct: 14 RLGMEAAGHQCVGFCEVDGFARKSYKAIFNTEKEVELHDIRSVPDESIRGLGQVDILCGG 73
Query: 61 PPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLIT 117
PCQ F+ G ++ D R L + + + + LENV G G + + I
Sbjct: 74 FPCQSFSLAGSRRGFRDERGN-LFFEVARFAKLLRPSYIFLENVPGLLSHGGGDTFETIL 132
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPK 177
S L G+ + +L+ + FGVP +R R +L+ ++ F + + + ELP+
Sbjct: 133 STLDALGYNVEWQVLNSSHFGVPQNRQRIFLVGHSR--RRGTQPIFPLGSDNREVAELPE 190
Query: 178 LKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVSDK 214
++ N+ L + +P G Y+V K
Sbjct: 191 IRTNS-------------LTAQYPGGQGNGSYIVESK 214
>gi|390440973|ref|ZP_10229162.1| Modification methylase HgiBI [Microcystis sp. T1-4]
gi|389835743|emb|CCI33288.1| Modification methylase HgiBI [Microcystis sp. T1-4]
Length = 462
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 59 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 117
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 118 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 176
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 177 NAYDFGLPQNRERVFIVGIRK 197
>gi|422304470|ref|ZP_16391815.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
gi|389790376|emb|CCI13741.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9806]
Length = 324
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF PR ++ I ++ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDAQAIYHANFNDQPRGDIT-------EIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ +I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLQVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|425443855|ref|ZP_18823918.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9443]
gi|389733504|emb|CCI02731.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9443]
Length = 463
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 59 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 117
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 118 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTSCGYQVYWQLL 176
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 177 NAYDFGLPQNRERVFIVGIRK 197
>gi|325298663|ref|YP_004258580.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
gi|324318216|gb|ADY36107.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
Length = 463
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+EV+ A DI S + Y++N P T L +I+ +I D + PPCQ ++
Sbjct: 21 GIEVIWANDIEASIHETYQYNHPNTILCKSDIRELHASDIPDC--DGFIGGPPCQSWSEG 78
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RAGFR 126
G Q + D R + I + ++ENVKG + S L+ + G+
Sbjct: 79 GKQLGLNDERGKLFLDYVRLIKE-KQPKFFVIENVKGIISDKHLQTFLSFLSILEKVGYI 137
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
LL+ F +P R R +++
Sbjct: 138 VSYALLNAADFRIPQDRYRVFVVG 161
>gi|428779076|ref|YP_007170862.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693355|gb|AFZ49505.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 468
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + I +++I+ + D+I+ PCQP++ G
Sbjct: 54 EIDRDAREVYQKNFINY-VNSDEIDLGDVKQIHHLPWRIDLIVGGVPCQPWSIAGKSGGF 112
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRFQEFLL 132
D R L + + I + Q + ENVKG R S I LT +G++ Q +L
Sbjct: 113 DDPR-GRLWFDVIRIVELNQPQGFIFENVKGLTDPRHQKSFSYILESLTNSGYQVQWKVL 171
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P R R +++ ++
Sbjct: 172 NSYDFGLPQDRQRVFIVGNKT 192
>gi|402830195|ref|ZP_10878900.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. CM59]
gi|402286252|gb|EJU34728.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. CM59]
Length = 337
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 5 SNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ + F+ + ID + AN YK+NFP G +I + ++ + D+I PCQ
Sbjct: 20 AGYQFTEHYFSEIDKHAIAN--YKYNFPHAINLG-DITTIRSTDLTGI--DIITFGSPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAI-PSLQCLLLENVKG-FEGSRSRD---LITSM 119
F+ G +K +A ++ + + + I I I PS+ + ENVKG F + D ++ +
Sbjct: 75 DFSLAGRRKGLAGSKSSLIQHAIALIADIRPSV--FVWENVKGAFSSNAGADFWAILQAF 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G+R + LL+ T++ +P +R R YLI
Sbjct: 133 ANIGGYRLELQLLN-TKWLLPQNRERIYLIG 162
>gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 410
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFS---IEE---INAMSPDVILMSPPC 63
E + ++ + A K N P + +I + S +EE I D++ PC
Sbjct: 97 GFETLGLVEFDKDAAESLKTNRPNWRVIHDDIANISCMDLEEYFGIKKGELDLLSGGAPC 156
Query: 64 QPFTRTGLQKDIADARCTAL-SYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
Q F+ G + + DAR T Y I P + L ENVKG + R+ IT +
Sbjct: 157 QAFSYAGKRLGLEDARGTLFYHYAIFLQKLQPKI--FLFENVKGLLTHDKGRTYATITDI 214
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSE 170
+AG+ Q+ +L+ +GVP R R I R+ + SF F E
Sbjct: 215 FEQAGYTIQKKVLNAWDYGVPQKRERLITIGIRNDLVEKT--SFTFPKEQE 263
>gi|407004442|gb|EKE20829.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 373
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 13 VVTAIDINTSANSVYKHNFPRT-----NLRGRNIQSFSIEEINAMSPDVILMSPPCQPFT 67
VV A D A Y+ N T ++ + IQS +E+ D+I+ PPCQ F+
Sbjct: 159 VVVANDNFKQACETYRANHKDTVLIEGDITNKKIQSEILEKSKKSKVDIIVGGPPCQGFS 218
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG---FEGSRSRDLITSMLTRAG 124
G ++ I D R + + I + +LENV+G G ++ + + S G
Sbjct: 219 HAG-KRMIDDPRNLLYKEFVNVVKKIKP-KVFVLENVEGIMTINGGKTYEEVKSNFEELG 276
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L +FGVP R R +I
Sbjct: 277 YSVIGHKLHAVKFGVPQKRKRVIIIG 302
>gi|348590059|ref|YP_004874521.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347973963|gb|AEP36498.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
Length = 325
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
R++ + + + + D + A Y NF L +I I+ I D++ P
Sbjct: 25 RVALQSLGAKCLFSSDWDRYAKETYWINF--KELPHDDITKIDIKFIPEH--DILCAGFP 80
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQ F+ +G + D+R T L + + I + + LENV+ F + R+ ++
Sbjct: 81 CQAFSISGKRLGFEDSRGT-LFFDVVRIAESRRPKVIFLENVRNFAKHDSGRTLRVVKQS 139
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L R G+ F +L+ + +G+P SR R +++A R H
Sbjct: 140 LLRLGYSFDWKVLNSSDYGIPQSRARIFMVAFREDLKH 177
>gi|376002867|ref|ZP_09780688.1| Modification methylase M.Asp8005ORF360 (Cytosine-specific
methyltransferase ) [Arthrospira sp. PCC 8005]
gi|375328773|emb|CCE16441.1| Modification methylase M.Asp8005ORF360 (Cytosine-specific
methyltransferase ) [Arthrospira sp. PCC 8005]
Length = 445
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 22 SANS--VYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADA 78
+ANS VYK NF R NL N+ + D+I PCQP++ G + + D
Sbjct: 45 AANSIQVYKQNFIRDANLDEPNLGDMRSLHKLPFTVDLITGGVPCQPWSIAGKLRGLDDP 104
Query: 79 RCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRSRDLITSM---LTRAGFRFQEFLLS 133
R ++TI I Q L +LENVKG R R S+ L+ A + + +++
Sbjct: 105 RG---QLWLDTIRVIKMNQPLAFILENVKGLTDPRHRPQFESILEELSAANYHLKWQVIN 161
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ FG+P R R +++ R F
Sbjct: 162 ASDFGLPQDRDRVFIVGIRRDINQGQNFQF 191
>gi|209524941|ref|ZP_03273486.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|423067400|ref|ZP_17056190.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|209494590|gb|EDZ94900.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|406710974|gb|EKD06176.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 442
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 22 SANS--VYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADA 78
+ANS VYK NF R NL N+ + D+I PCQP++ G + + D
Sbjct: 45 AANSIQVYKQNFIRDANLDEPNLGDMRSLHKLPFTVDLITGGVPCQPWSIAGKLRGLDDP 104
Query: 79 RCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRSRDLITSM---LTRAGFRFQEFLLS 133
R ++TI I Q L +LENVKG R R S+ L+ A + + +++
Sbjct: 105 RG---QLWLDTIRVIKMNQPLAFILENVKGLTDPRHRPQFESILEELSAANYHLKWQVIN 161
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ FG+P R R +++ R F
Sbjct: 162 ASDFGLPQDRDRVFIVGIRRDINQGQNFQF 191
>gi|94995093|ref|YP_603191.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
gi|94548601|gb|ABF38647.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10750]
Length = 321
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 6 NHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINA--MSPDVILMSPPC 63
N EVV ++I+ + Y L G + + S+ E A D+++ PC
Sbjct: 22 NLKIPYEVVDYVEIDRACVKSY------NALYGEDYKPKSVVEYKAPNAKIDLVMHGSPC 75
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD---LI 116
Q F+R G +K T S L ETI I + + ++ ENVKG RD +
Sbjct: 76 QDFSRIGKKKGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENVKGVLDRNMRDSFFIY 135
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
L G+ + +L+ FG+P R R ++++
Sbjct: 136 LKELENLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|387908374|ref|YP_006338708.1| type II DNA modification enzyme [Helicobacter pylori XZ274]
gi|387573309|gb|AFJ82017.1| type II DNA modification enzyme [Helicobacter pylori XZ274]
Length = 313
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|387790993|ref|YP_006256058.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
gi|379653826|gb|AFD06882.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
Length = 411
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARC----TALSYLIETIPAIPSLQCLLLENVKGF--- 107
D++ PPCQ F+ G +K+ D R + L +++ T P I + ENVKGF
Sbjct: 84 DMVAGGPPCQGFSMAGRRKE-DDVRNGLIRSYLKFIMYTRPKI-----IFFENVKGFTLQ 137
Query: 108 --------EGSRSR-----DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSP 154
RS+ +L+ +LTR G+ + ++ + +G+P RTR+ L+ R+
Sbjct: 138 FKKNKTSVNEIRSKKKAYSELVVGVLTRLGYNVKGQMIDFSNYGIPQKRTRFILVGIRND 197
Query: 155 AAHSS--EASFCFETSSE 170
A +A++ F+ ++
Sbjct: 198 VAEKKKLDATYFFKKITQ 215
>gi|300813808|ref|ZP_07094115.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300512098|gb|EFK39291.1| DNA (cytosine-5-)-methyltransferase [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 321
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y ++ ++ G + +I D+++
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAPNENI--------DLVMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELEELGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|424796628|ref|ZP_18222329.1| Modification methylase FnuDI [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422794854|gb|EKU23656.1| Modification methylase FnuDI [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 334
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 12/149 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+E V ++ + A + Y + P +I+ S E D++ PPCQPF+
Sbjct: 5 GIEPVACVEKSKDAVATYDAHTPAAEHFLSDIRKISFERYRGKI-DIVFGGPPCQPFSTG 63
Query: 70 GLQKDIADARCTALSY---LIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT---RA 123
GL+ ADAR + L E PA L ENV G + +L
Sbjct: 64 GLRLGTADARNMFPEFIRVLKEVQPA-----AFLAENVPGLATRNRVQYLAELLNEFKEL 118
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
GF ++S +GVP R R ++ R
Sbjct: 119 GFNVSWHVVSAADYGVPQKRRRLIIVGMR 147
>gi|352079819|ref|ZP_08950888.1| C-5 cytosine-specific DNA methylase [Rhodanobacter sp. 2APBS1]
gi|351684528|gb|EHA67597.1| C-5 cytosine-specific DNA methylase [Rhodanobacter sp. 2APBS1]
Length = 337
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP---DVILMSPPCQPF 66
L+ + A+D+ A Y HNFP + R I+ I+ + P D++L SP C
Sbjct: 22 GLQPLVAVDLWDIACQTYSHNFPSATVLNRRIEE--IDPLQYARPGGVDLLLASPEC--- 76
Query: 67 TRTGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKGFEG-SRSRDLITSMLTRA 123
T + K A + + TI I +L+ ++ENVK R R+L + L+
Sbjct: 77 TNHSVAKGAAVRDEGSRETALHTIKWIAALRPRWFVMENVKEMRAWPRYREL-HNTLSAL 135
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G++ +E +++ QFG P +R R +LI
Sbjct: 136 GYQVREEVINAAQFGAPQARVRLFLIG 162
>gi|336420488|ref|ZP_08600652.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009847|gb|EGN39836.1| hypothetical protein HMPREF0993_00029 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 387
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A +I+ Y+ N+ + G +I++ ++E + DV+ PCQ F++ G Q+
Sbjct: 29 VFASEIDKYCIETYQENYGMDS--GIDIRN--VDEKDIPPHDVLCAGFPCQAFSKAGKQE 84
Query: 74 DIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFRFQE- 129
+ D L + I I ++LENV+ + + +I + L + G+R E
Sbjct: 85 GMEDETRGTLFFEIVRILKHHHTPYIVLENVRNLVSHDHGNTWKVIRANLRKQGYRLMEK 144
Query: 130 -FLLSPTQFGVPNSRTRYYLIAKRSP 154
+LSP FGVP R R ++ K P
Sbjct: 145 PLILSPHHFGVPQLRERVVILGKYEP 170
>gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 500
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEI--------NAM 52
L HA E+V A++ + A + NF ++ R+I S + +++
Sbjct: 34 LGFHAVGCEIVAAVEHDPDAAKSHGLNFHAGSPVHMEPRDISSTPPANLTKALGLGHHSL 93
Query: 53 SPDVILMSPPCQPFTRTGLQK--DIAD----------AR--CTALSYLIETIPAIPSLQC 98
+ DV++ PPCQ F R G K ++AD AR L Y+ E P
Sbjct: 94 AFDVVIGGPPCQAFARVGRSKLREVADHPEAFRHDPRARLYIEYLDYVEECAPL-----A 148
Query: 99 LLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ENV G + I+ +L G+R LL+ ++GVP R R +LIA R
Sbjct: 149 VLMENVPDVLNHGGHNIAEEISEVLESRGYRCGYTLLNAARYGVPQMRERMFLIAYR 205
>gi|428777713|ref|YP_007169500.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428691992|gb|AFZ45286.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 338
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 19/148 (12%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPD------VILMSPPCQP 65
E V + + ++ A Y+ NF +IN + PD ++L PCQP
Sbjct: 53 ECVFSCEWDSHAQKTYRANF----------NEIPFGDINKIQPDAIPDHEILLAGFPCQP 102
Query: 66 FTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTR 122
F+ G ++ L Y I I A C LLENV G + ++ +I L
Sbjct: 103 FSAIGKREGFLHKTQGTLFYSIAKILAAKRTLCFLLENVPGLLTNDNGKTFQIILKTLDE 162
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + L FG+P R R Y++
Sbjct: 163 LNYDVRYATLDAADFGLPQYRKRIYIVG 190
>gi|403058608|ref|YP_006646825.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805934|gb|AFR03572.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 361
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 24/204 (11%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTG 70
++V A D+ +A + FP T++ I S I +I + D+++ PCQ F+ G
Sbjct: 34 DIVFANDVVENACKTLGNYFPDTDV----IHS-DISQIQSFPDVDIVVGGYPCQSFSMAG 88
Query: 71 LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR---AGFRF 127
+K D R + + + + + + ENV G + + + LT AG++
Sbjct: 89 NRKPNNDDRTNLYKHFLRVLETV-RPKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQV 147
Query: 128 QEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCNPLL 187
L++ +GVP SR R ++I R+ E F ET KA NP L
Sbjct: 148 SYHLVNARAYGVPQSRKRLFIIGVRNDLGQYFE--FPAETHG---------KATKKNPHL 196
Query: 188 SRMTLHG--ILD-STHPSGDLYRR 208
HG I D P G+ Y R
Sbjct: 197 KPYVSHGEAIRDLPLWPEGEFYER 220
>gi|420407278|ref|ZP_14906444.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393022177|gb|EJB23305.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 313
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYRILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|315917403|ref|ZP_07913643.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691278|gb|EFS28113.1| type II restriction-modification system methylation subunit
[Fusobacterium gonidiaformans ATCC 25563]
Length = 320
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R+GL+K T S L ETI I + + +L ENVKG
Sbjct: 70 DLLMHGSPCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIEEMKIRPKIVLWENVKGVLDK 129
Query: 111 RSRDLITSMLT---RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
R L R G+ + +L+ FG+P R R ++++
Sbjct: 130 NMRASFFHYLKEMERLGYENKYEILNAMDFGIPQKRERIFVVS 172
>gi|420450081|ref|ZP_14948946.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393068277|gb|EJB69080.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 313
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I + D ++ P
Sbjct: 11 RLGLEQCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---INPNDLPDFDALISGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + Y I I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLISHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
L AG+ +L+ F + +R R Y++ R H
Sbjct: 127 LQEAGYTTYYQILNSADFQLAQNRERLYIVGFRKDLKH 164
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 30/210 (14%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN------AMSP---DVILMS 60
+V D A Y+ NFP +++ I P DV++
Sbjct: 46 GFDVALGSDQWEPAAETYRRNFPDVEFVEEDVRELDAPAIRESVERAGYDPGGIDVVIGG 105
Query: 61 PPCQPFTRTG-----LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRS--- 112
PPCQ F+R L + D R T + + ++ Q +L+ENV+ ++
Sbjct: 106 PPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVV-SVLEPQLVLMENVRDLINRQTSDD 164
Query: 113 ---RDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAK------RSPAAHSSEASF 163
+DLI G++ + +L Q+GVP R R + + R P + E S+
Sbjct: 165 RYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTDRDVPIRFPEPTTPEGSW 224
Query: 164 --CFETSSELMTELPKLK-ANTCNPLLSRM 190
E ++ +LP + ANT L R+
Sbjct: 225 RTAGEALADATDDLPNMTYANTQEKTLERI 254
>gi|440682814|ref|YP_007157609.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679933|gb|AFZ58699.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 390
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL ++E + A DIN + VY+ NF + ++ +I I I + D++ P
Sbjct: 19 RLGLTNANIETIWANDINQLSCQVYESNFGKDSIVLGDINKIPISCIP--NHDILTAGFP 76
Query: 63 CQPFTRTGLQKDIADA-RCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITS 118
CQPF+ G + + D+ R + ++E I + LLENVK E +I +
Sbjct: 77 CQPFSPAGKKLGVRDSVRGSLFERIVEIINE-KQPKHFLLENVKRLLTMENGYHFRVILN 135
Query: 119 MLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
L+ + + ++SP FG+P +R R ++ +
Sbjct: 136 ALSELDYFIEWRIISPISFGIPQNRDRIFIFGTK 169
>gi|406672487|ref|ZP_11079712.1| DNA (cytosine-5-)-methyltransferase [Bergeyella zoohelcum CCUG
30536]
gi|405587031|gb|EKB60759.1| DNA (cytosine-5-)-methyltransferase [Bergeyella zoohelcum CCUG
30536]
Length = 379
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
++ H FS +IN + + Y++ FP G ++Q + E IN D+I PC
Sbjct: 28 INKHYFS-------EINKHSVACYRYRFPNAMDLG-DVQQINSETINE-RIDIITFGSPC 78
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQ--CLLLENVKG-FEGSRSRD---LIT 117
Q F+ G ++ + R S + E + I LQ + ENVKG F + RD ++
Sbjct: 79 QDFSLAGKRQGLEGERS---SLIKEAMRLIKELQPSVFIWENVKGTFSSNAGRDFKAILQ 135
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ G+R + LL+ T++ +P +R R YL+
Sbjct: 136 AFANIGGYRLEWQLLN-TRWFLPQNRERIYLVG 167
>gi|420406144|ref|ZP_14905317.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021963|gb|EJB23093.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 319
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 19/164 (11%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP------DV 56
RL L+ V +IN A Y+ F T ++ ++ ++P D
Sbjct: 17 RLGLEQCRLKCVGHAEINHEALRTYELFFKDT---------YNFGDLMRINPNDLPDFDA 67
Query: 57 ILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD-- 114
++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 68 LISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQETF 126
Query: 115 -LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 127 KTIIKALQEAGYTTYYRILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|420395861|ref|ZP_14895086.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393012221|gb|EJB13402.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 312
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 431
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI------NAMSPDVILMSPPC 63
+V+ A++I+ +V+++NFP ++ ++++ + +EI N DVI+ PC
Sbjct: 37 GFDVLAAVEIDPIHCAVHEYNFPFCSVLCKSVEETTGKEIRDRSKINNQDIDVIICGSPC 96
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR- 122
Q F+ G K I D +L + + + ++ENV+G + ++ +++
Sbjct: 97 QGFSLMG--KRIFDDPRNSLVFHFHRLVLELQPKFFVMENVRGITLGEHKQILQALIHEF 154
Query: 123 --AGFRFQE--FLLSPTQFGVPNSRTRYYLIAKR 152
G++ +E +L+ +GVP +R R +LI R
Sbjct: 155 KSHGYQVEENYQVLNAAHYGVPQARERLFLIGAR 188
>gi|425465184|ref|ZP_18844494.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9809]
gi|389832604|emb|CCI23612.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9809]
Length = 462
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D+I+ PCQP++ G +
Sbjct: 59 EIDKQAIQVYQQNF-ISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLRGF 117
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 118 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTGCGYQVYWQLL 176
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 177 NAYDFGLPQNRERVFIVGIRK 197
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 32/213 (15%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQK 73
V A++ + A + YK N P TN+ ++I+ + P ++ PPCQ F+
Sbjct: 29 VLAVEFDEHAAATYKANHPHTNVLAKDIKGVEPLKHVEKHPFLLFGGPPCQGFS------ 82
Query: 74 DIADARCTALS-----YLIETIPAIPSLQ--CLLLENVKG---FEGSRSRDLITSMLTRA 123
+A+ + L E + L+ + ENV G F+ R + L
Sbjct: 83 -VANTKTRNLDNPNNWMFREYCRFVEDLKPDWFVFENVVGFKSFDKGRFAVEVEKELKSL 141
Query: 124 GFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE--------TSSELMTEL 175
G++ +L+ FGVP R R+++I R F F+ T E + +L
Sbjct: 142 GYKTNSSVLNAADFGVPQYRNRFFIIGHRK---EKGGIKFDFDSLEKKPKVTVGEALKDL 198
Query: 176 PKLKANTCNPLLSRMTLHGILDSTHPSGDLYRR 208
P LK N + + + HP L RR
Sbjct: 199 PSLK----NGDKIKEAAYKRVKQVHPYVKLIRR 227
>gi|414086205|ref|YP_006986395.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
gi|378566530|gb|AFC22226.1| putative DNA-methyltransferase, type II restriction-modification
system [Cronobacter phage vB_CsaM_GAP161]
Length = 303
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 6 NHAFS-LEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQ 64
+ AF +E + +I+ A Y N+ NL+G F+I+E D++L PCQ
Sbjct: 18 DKAFGGVECLLTSEIDKFAQQTYIENWGDDNLQG---DLFAIDENKVPDHDILLAGFPCQ 74
Query: 65 PFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLT 121
F++ GL+ D R T ++ I A + L ENV + ++ I +L
Sbjct: 75 AFSKAGLKLGFDDVRGTVFFEILRIIRA-KKPRVLFFENVPELLTHDKGKTFKTIYGLLE 133
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLI 149
G+ L+ FG+P R R +++
Sbjct: 134 AEGYNVFYQRLNTKDFGLPQRRERVFIV 161
>gi|335424309|ref|ZP_08553320.1| putative methylase [Salinisphaera shabanensis E1L3A]
gi|334889960|gb|EGM28244.1| putative methylase [Salinisphaera shabanensis E1L3A]
Length = 324
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEIN-AMSPDVILMSPPCQPFTRTGLQKD 74
A+DI +A + Y+ NFP ++ ++ + A+ D++L SP C T L +
Sbjct: 27 AVDIWQAATATYQCNFPEAHVITSSVDDVEPRRFDPALGADLLLTSPEC---TSHSLARG 83
Query: 75 IADARCTALSYLIETIPAIPSLQ--CLLLENVKGFEGSRSRDLITSMLTRAGFRFQEFLL 132
A T+L I +P + + +++ENV + + R G+ E LL
Sbjct: 84 NRPADETSLETAISFMPWVDHFRPRWIVIENVARLRAWDRYASLCDQVARRGYEVSECLL 143
Query: 133 SPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
+ FG P +R R ++I R + + +A +
Sbjct: 144 NAADFGAPQARKRLFMICGRESSPPTVDALY 174
>gi|387782691|ref|YP_005793404.1| type II m5C methylase [Helicobacter pylori 51]
gi|261838450|gb|ACX98216.1| type II m5C methylase [Helicobacter pylori 51]
Length = 318
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|113478034|ref|YP_724095.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110169082|gb|ABG53622.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 413
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L A +++ + A D++ VY+ NF +++ +I ++ EI D++ PC
Sbjct: 43 LGMRAANIKTIWANDVSKLCCQVYQSNFGSSSIVLDDINKINLLEIP--EHDILTAGFPC 100
Query: 64 QPFTRTGLQKDIAD-ARCTALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSM 119
QPF++ G + I D R T +IE I A + LLENVK E +I +
Sbjct: 101 QPFSQAGKKMGIRDRLRGTLFERIIEIIQA-KKPKYFLLENVKRILTMEKGYHFRIILNA 159
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTE 174
L + + +++P F +P +R R ++ S++ + E S +T+
Sbjct: 160 LASLDYFIEWRIINPINFSIPQNRDRIFIFG---TCIKSTQKTLDLENLSVFLTD 211
>gi|421713854|ref|ZP_16153180.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407213910|gb|EKE83762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 312
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|420540713|ref|ZP_15039021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393147333|gb|EJC47657.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
Length = 313
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I+ + DV++ P
Sbjct: 11 RLGLERCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---IDPNDLPDFDVLVSGFP 67
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 68 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 126
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 127 LQEAGYTTHYQILNSADFQLAQKRERLYIVGFRK 160
>gi|385249579|ref|YP_005777798.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317182374|dbj|BAJ60158.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 318
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 10/180 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM----SPDVILMSPPCQP 65
E + +++ N YK NFP+ NL ++I S E+ + DVI+ PPCQ
Sbjct: 22 GFENIFSLEFNPEFAETYKKNFPKNNLIVKDIADISEPEVKKIIGETDVDVIVGGPPCQG 81
Query: 66 FTRTGL--QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLT-- 121
F+ G + I D R + + + +I + +LENV + + I ++
Sbjct: 82 FSLAGRIGRTFIEDDRNYLFNEFVRIV-SIVKPEMFILENVARMARHNNGNTIIEIINEF 140
Query: 122 -RAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKA 180
+ + + +L + +G+P R R ++ + + + T + + +LP LK+
Sbjct: 141 KKIDYDVKYEVLQTSDYGIPQRRKRIIIVGTKDYTFEFPKKNNSVITVKDAIDDLPTLKS 200
>gi|302380785|ref|ZP_07269249.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
gi|302311385|gb|EFK93402.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
ACS-171-V-Col3]
Length = 321
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y N+ ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGENYKPKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENV+G RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENVRGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELESLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|85709931|ref|ZP_01040996.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
gi|85688641|gb|EAQ28645.1| Type II restriction-modification system methylation subunit
[Erythrobacter sp. NAP1]
Length = 370
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 32/154 (20%)
Query: 23 ANSVYKHNFP-RTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCT 81
A Y+ NF R N +I E+ A D++L PCQ F+ GL++ D R T
Sbjct: 55 AQDTYELNFGHRPN---GDITKIDASEVGAH--DILLGGFPCQAFSNAGLKQGFLDTRGT 109
Query: 82 ALSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITSMLTRAGFRFQE--------- 129
+ + I+ I A + LLENVK G +G R+ D I S+L R +
Sbjct: 110 -MFFEIQRILAEWRPRMFLLENVKQLRGHDGGRTLDTILSILAGKDSRVPDNVPMSLEAR 168
Query: 130 -------------FLLSPTQFGVPNSRTRYYLIA 150
+L+ T+FGVP R R Y++
Sbjct: 169 RSLSRKLNYSVGYQVLAATEFGVPQKRERVYIVG 202
>gi|425789663|ref|YP_007017583.1| type II DNA modification methyltransferase [Helicobacter pylori
Aklavik117]
gi|425627978|gb|AFX91446.1| type II DNA modification methyltransferase [Helicobacter pylori
Aklavik117]
Length = 315
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|420403922|ref|ZP_14903107.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
gi|393018794|gb|EJB19940.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
Length = 313
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYRILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|336313836|ref|ZP_08568758.1| DNA-methyltransferase Dcm [Rheinheimera sp. A13L]
gi|335881775|gb|EGM79652.1| DNA-methyltransferase Dcm [Rheinheimera sp. A13L]
Length = 409
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 39/214 (18%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSR 111
DV++ PCQPF+ GL+ I D R T L + I I + LLENVKG +
Sbjct: 150 DVLVAGFPCQPFSHAGLKLGIDDTRGT-LFHDIARILETKKPKFALLENVKGLISNDKGY 208
Query: 112 SRDLITSMLTRAGF-------------------RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ ++ LTR G+ ++ +L+ T FGVP +R R Y++ +
Sbjct: 209 TLQVVLRTLTRIGYSCNISKDLIQNGTAKQIQAEAKKMVLTSTDFGVPQNRQRIYIVLWQ 268
Query: 153 SPAAHSSEASFCFETSSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRRYLVS 212
SF + T S + T++ + P ++T+ L H +R +
Sbjct: 269 DGLID----SFEYPTPSGIKTKVGDILEPKPEP---KLTISDRLWDGH------QRRKIE 315
Query: 213 DKDLLRRFHVFDIVNGKASSTNCFTKAYTHYAEG 246
+K+ + F F +V ++S N + Y Y +G
Sbjct: 316 NKNNGKGFG-FGLVTKESSYANTISARY--YKDG 346
>gi|325069077|ref|ZP_08127750.1| cytosine-specific DNA modification methyltransferase [Actinomyces
oris K20]
Length = 448
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP-DVILMSPPCQPFTRTGLQKD 74
A++I+ A +Y+ N+ L + + + P D++ PCQPF+++G Q
Sbjct: 31 AVEIDKDAARIYEQNWGVGALGDITVDAGEHGVSERIQPHDILAAGFPCQPFSKSGAQAG 90
Query: 75 IADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSR---SRDLITSMLTRAGFRFQE-- 129
+ D L + I I LLLENV+ G R ++I L G+R +
Sbjct: 91 MLDEVRGTLYFNILKIVQERHPTVLLLENVRNLAGPRHAHEWEVIVESLREEGYRVADTP 150
Query: 130 FLLSPTQFGV-----PNSRTRYYLIAKRSPAAHSSEASFCFETSSELMTELPKLKANTCN 184
+LSP Q G P R R ++ A P S EL + P + +
Sbjct: 151 AILSPHQLGPERGGRPQVRERVFITATYDPDGIGSTEPQPVARPRELYADGP-VDWQIDD 209
Query: 185 PLLSRMTLHGILDSTHPSGDLYRRYLVSDKDLLRRF 220
LL+ + + + D+ + ++ + D ++RF
Sbjct: 210 YLLADVEGYDLSDAE-------KDWIYAWDDWVQRF 238
>gi|384898634|ref|YP_005774013.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317178577|dbj|BAJ56365.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 318
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|428301089|ref|YP_007139395.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428237633|gb|AFZ03423.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 326
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPR-------TNLRGRNIQSFSIEEINAMSPDVILMSPP 62
++V A + A VYK NF +NL+G + + + D+I+ PP
Sbjct: 32 GFKIVGAFENWNPAIEVYKKNFSHPIYNYDLSNLKGDD------KLFQNIDFDMIIGGPP 85
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR 122
CQ F+ G + + ++S+ I P + L+ENV+G++ ++ I +M
Sbjct: 86 CQDFSSAGKRNEDLGRGDLSISFAEIVISNRP--KWFLMENVEGYKKTQKYSQIVNMFRA 143
Query: 123 AGFRFQEFLLSPTQFGVPNSRTRYYLIAK 151
+ E ++ + GVP +R RY I K
Sbjct: 144 NSYGLTETIIKASLCGVPQNRKRYICIGK 172
>gi|357048861|ref|ZP_09110094.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
gi|355384684|gb|EHG31745.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
Length = 333
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP----DVILMSPPCQPFTRT 69
V +++ + Y+ NFP NL +I+ ++IN + DV++ PPCQ F+
Sbjct: 28 VFSVEFDKKIAKTYEKNFPNNNLFVGDIRDVDNKKINELMGNEIVDVVIGGPPCQGFSMA 87
Query: 70 G--LQKDIADARCTALSYLI----ETIPAIPSLQCLLLENVKGFE----GSRSRDLITSM 119
G +K + D R + ET P I ++ENV + G +++I
Sbjct: 88 GNIGRKFVDDPRNQLFKEFVRVVNETQPKI-----FVMENVARLQTHNKGQTIKEIIDE- 141
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSS--EASFCFETSSELMTELPK 177
+ G+ +L +GVP R R +++ + P E T E + LP
Sbjct: 142 FEKVGYYSTYKVLQAADYGVPQKRQRIFIVGTKDPDFEFKFPEGFGTTVTVKEAIGNLPP 201
Query: 178 LKANTCNPLLSRMTLH 193
LK+ + + + ++
Sbjct: 202 LKSGEVSNVTNHFAMN 217
>gi|419719946|ref|ZP_14247204.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
gi|383303878|gb|EIC95305.1| modification methylase HpaII [Lachnoanaerobaculum saburreum F0468]
Length = 346
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 45 SIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENV 104
++E + D++L PCQ F+ G ++ DAR T L + + I + + ENV
Sbjct: 58 KVDEKDIPPHDILLAGFPCQAFSLAGQKRGFEDARGT-LFFDVARIVKYHKPKVVFCENV 116
Query: 105 KGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAA 156
K + R+ D+I ++L G++ +L+ F VP +R R Y++ R+ A
Sbjct: 117 KNLVNHDRGRTFDVIKAVLADLGYKVFYKVLNSKNFSVPQNRERIYIVGFRNDIA 171
>gi|385225773|ref|YP_005785698.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83]
gi|332673919|gb|AEE70736.1| C-5 cytosine-specific DNA methylase [Helicobacter pylori 83]
Length = 319
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 124
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|308183225|ref|YP_003927352.1| type II DNA modification enzyme [Helicobacter pylori PeCan4]
gi|308065410|gb|ADO07302.1| type II DNA modification enzyme [Helicobacter pylori PeCan4]
Length = 318
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I + + DV++ P
Sbjct: 17 RLGLERCHLKCVGHAEINDEALRTYELFFKDTHNFGDLMR---INPNDLPNFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLISHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 133 LQEAGYTTHYQMLNSADFQLAQKRERLYIVGFRK 166
>gi|322511205|gb|ADX06517.1| putative C-5 cytosine specific DNA methyltransferase [Organic Lake
phycodnavirus]
Length = 384
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
++ VV D+ + ++Y +NF L +++ E+I S D++ PCQPF+
Sbjct: 93 AVNVVFGNDMVEHSKNIYDNNFNHK-LTLKDLNEVKNEDI--PSHDILTGGFPCQPFSIA 149
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAGFR 126
GLQ+ D R + I +I +C++LENVK + +++ + I + + + G+
Sbjct: 150 GLQEGFKDERSNVF-WKILSIINTHRPKCVILENVKNLLSHDDNKTFNTIKNNIEQRGYN 208
Query: 127 FQEFLLSPTQF-GVPNSRTRYYLIAKRS 153
+L+ G+P+ R R Y++ +S
Sbjct: 209 ICYKVLNTADITGIPHHRERIYIVCIKS 236
>gi|189096062|pdb|2UYH|A Chain A, Hhai Dna Methyltransferase S87q-Q237s Mutant Complex With
13mer Gcgc-Gmgc Oligonucleotide And Sah
Length = 327
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNF---PRTNLRGRNIQSFSIEEINAMSPDVILM 59
RL+ + E V + + + A VY+ NF P ++ + E D++
Sbjct: 25 RLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDIT-------QVNEKTIPDHDILCA 77
Query: 60 SPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLI 116
PCQ F+ G QK D+R T L + I I + + +ENVK F + + +++
Sbjct: 78 GFPCQAFSIQGKQKGFEDSRGT-LFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVV 136
Query: 117 TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
+ + + F +L+ +G+P R R Y+I R+
Sbjct: 137 KNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRN 173
>gi|15645735|ref|NP_207912.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
gi|410024349|ref|YP_006893602.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori Rif1]
gi|410502115|ref|YP_006936642.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori Rif2]
gi|410682635|ref|YP_006935037.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
gi|419417104|ref|ZP_13957591.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori P79]
gi|2314272|gb|AAD08164.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
gi|384373798|gb|EIE29250.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori P79]
gi|409894276|gb|AFV42334.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori 26695]
gi|409896006|gb|AFV43928.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori Rif1]
gi|409897666|gb|AFV45520.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori Rif2]
Length = 312
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR- 113
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG +
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPECFLLENVKGLINHNKKA 118
Query: 114 --DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
++I L G+ +L+ F + +R R Y++ R H
Sbjct: 119 TFNIIIKALQEVGYTTYYKILNSADFQLAQNRERLYIVGFRKDLKH 164
>gi|420449183|ref|ZP_14948056.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393063718|gb|EJB64562.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 318
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 66 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 124
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 125 TFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKH 170
>gi|425443062|ref|ZP_18823294.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
gi|389715722|emb|CCH99951.1| Modification methylase NgoBI [Microcystis aeruginosa PCC 9717]
Length = 331
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM---SPDVILMSPPCQPFTR 68
+ V + DI+ A ++Y NF G Q I EI A+ + D+++ PCQPF+
Sbjct: 38 DCVFSCDIDKDARAIYHANF------GDKPQG-DITEIAALDIPNHDILMAGFPCQPFSI 90
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGF 125
G K D R T L + I I +LENVK +G ++ ++I L +
Sbjct: 91 CGDLKGFEDTRGT-LFFEIARILKAKQPAAFILENVKQLQGHQQGKTLEVILDTLQDLDY 149
Query: 126 RFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+L+ FG+P R R +++ R
Sbjct: 150 YTDYRVLNALNFGLPQKRERIFIVGFR 176
>gi|325849320|ref|ZP_08170737.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480182|gb|EGC83251.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 321
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y ++ ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKDMKDKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELESLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|385228800|ref|YP_005788733.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344335238|gb|AEN15682.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|434383171|ref|YP_006704954.1| DNA-cytosine methyltransferase [Brachyspira pilosicoli WesB]
gi|404431820|emb|CCG57866.1| DNA-cytosine methyltransferase [Brachyspira pilosicoli WesB]
Length = 330
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
+ + A + + + +K+NFP T L RNI ++I S ++ PPCQ ++
Sbjct: 25 GFKTIWANEYDKTIWDTFKYNFPETRLDTRNITEIDSKDIPNASG--LIGGPPCQSWSEA 82
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQE 129
G + I D R I + L+ENV G + R++ + L F+
Sbjct: 83 GAGRGINDDRGKLFYDYIRVLKD-KQPNFFLVENVVGILSKKHREVFENFLLE--FKISN 139
Query: 130 F-----LLSPTQFGVPNSRTRYYLIA 150
+ LL+ +GVP +R R ++
Sbjct: 140 YNISCKLLNANDYGVPETRKRVIVVG 165
>gi|417925342|ref|ZP_12568766.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
SY403409CC001050417]
gi|341591741|gb|EGS34846.1| DNA (cytosine-5-)-methyltransferase [Finegoldia magna
SY403409CC001050417]
Length = 321
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N EVV ++I+ S N++Y ++ ++ G + I D+I+
Sbjct: 22 NLKIPYEVVDYVEIDKACVKSYNALYGESYKAKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENVKGVLDRNMRDSFF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELENLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|16077673|ref|NP_388487.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308442|ref|ZP_03590289.1| hypothetical protein Bsubs1_03403 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312764|ref|ZP_03594569.1| hypothetical protein BsubsN3_03379 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317687|ref|ZP_03598981.1| hypothetical protein BsubsJ_03338 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321963|ref|ZP_03603257.1| hypothetical protein BsubsS_03409 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774831|ref|YP_006628775.1| DNA-methyltransferase [Bacillus subtilis QB928]
gi|418034313|ref|ZP_12672788.1| hypothetical protein BSSC8_37320 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452912689|ref|ZP_21961317.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
gi|81669163|sp|O34939.1|YDIO_BACSU RecName: Full=Probable BsuMI modification methylase subunit YdiO;
Short=M1.BsuMI; AltName: Full=Cytosine-specific
methyltransferase M1.BsuMI
gi|2521997|dbj|BAA22750.1| ydiO [Bacillus subtilis]
gi|2632919|emb|CAB12425.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp.
subtilis str. 168]
gi|351468958|gb|EHA29159.1| hypothetical protein BSSC8_37320 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480016|gb|AFQ56525.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis QB928]
gi|452117717|gb|EME08111.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
Length = 427
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 16 AIDINTSANSVYKHNFP---------RTNLRGRNIQSFSIEEINAMSP----DVILMSPP 62
A D+N +A SVY+ NF ++ G ++EE D IL PP
Sbjct: 116 ACDLNEAALSVYEKNFSPDFSLNESIEKHINGELGAPLTVEEQRIKDKVKKIDFILAGPP 175
Query: 63 CQPFTRTG---LQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF--EGSRSRDLIT 117
CQ + +KD +A +S +IE PS +L+ENV G + S S
Sbjct: 176 CQGHSDLNNHTRRKDPRNALLMRVSRVIELFQ--PS--SVLVENVPGIIHDKSGSFKEFK 231
Query: 118 SMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETSS 169
+ L G+ F E +L+ + GV +R RY++ A ++P + ++ + + T+S
Sbjct: 232 NHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASKTPVSSLNQINEFYSTNS 283
>gi|420400635|ref|ZP_14899835.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393016906|gb|EJB18062.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 312
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLINHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM------SPDVILMS 60
H E + AID+N A + Y+HN+P+T +I+ + E+ ++
Sbjct: 20 HLAGFESICAIDVNAKALATYQHNYPKTRTFQEDIRKVNPSELRLYLGLQREELTALIGG 79
Query: 61 PPCQPFTRT--GLQKDIADARCTALSYLIETIPAIPSLQCLLLENV----KGFEGSRSRD 114
PPCQ F+R + + D+R + + L +++ENV K + G RD
Sbjct: 80 PPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLH-VVMENVPEILKAY-GGIIRD 137
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ L+ +GVP +R+R + +A
Sbjct: 138 EIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLA 173
>gi|169824652|ref|YP_001692263.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297588631|ref|ZP_06947274.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304440076|ref|ZP_07399968.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|167831457|dbj|BAG08373.1| cytosine-specific DNA-methyltransferase [Finegoldia magna ATCC
29328]
gi|297574004|gb|EFH92725.1| type II restriction-modification system methylation subunit
[Finegoldia magna ATCC 53516]
gi|304371443|gb|EFM25057.1| type II restriction-modification system methylation subunit
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 320
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 6 NHAFSLEVVTAIDINT----SANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSP 61
N S EVV ++I+ S N++Y + ++ G + I D+I+
Sbjct: 22 NLKISYEVVDYVEIDKACVKSYNALYGEAYKPKSVVGYKAPNEKI--------DLIMHGS 73
Query: 62 PCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGSRSRD--- 114
PCQ F+R G ++ T S L ETI I + + ++ ENVKG RD
Sbjct: 74 PCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKDKPKWIIWENVKGVLDRNMRDSLF 133
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ L G+ + +L+ FG+P R R ++++
Sbjct: 134 IYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVS 169
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM------SPDVILMS 60
H E + AID+N A + Y+HN+P+T +I+ + E+ ++
Sbjct: 20 HLAGFESICAIDVNAKALATYQHNYPKTRTFQEDIRKVNPSELRLYLGLQREELTALIGG 79
Query: 61 PPCQPFTRT--GLQKDIADARCTALSYLIETIPAIPSLQCLLLENV----KGFEGSRSRD 114
PPCQ F+R + + D+R + + L +++ENV K + G RD
Sbjct: 80 PPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLH-VVMENVPEILKAY-GGIIRD 137
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ L+ +GVP +R+R + +A
Sbjct: 138 EIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLA 173
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSI--EEINAMSPDVILMSPPCQPFT 67
++ A D A + YK+N + G +I I E N D+++ PCQ F+
Sbjct: 24 GFNIIWANDFEKDAVTTYKNNIGDHIVYG-DITKIDIKNELPNEEEIDLVIGGFPCQGFS 82
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSMLTRAG 124
+++++ D R L++ I + + + ENVKG E + D+I G
Sbjct: 83 VNNIKRNMKDKRNFLYLELLKVI-ELKKPKFFVAENVKGLLSMEKGKVIDMIVKDFENLG 141
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ LL+ +GVP +R R +I R
Sbjct: 142 YEVDYQLLNAADYGVPQARERVIIIGNR 169
>gi|295395397|ref|ZP_06805596.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030]
gi|294971719|gb|EFG47595.1| modification methylase NaeI [Brevibacterium mcbrellneri ATCC 49030]
Length = 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 17 IDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
++I++ A + + N PR N+ ++ ++ + + PD++ PC PF+ G Q A
Sbjct: 30 VEIDSDAVATLRMNRPRWNVHQADLLNWQPPK-SLERPDLLAGGVPCPPFSLAGKQLGPA 88
Query: 77 DARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFRFQEFLLS 133
D R IE + I + + ++LENV+G G + R I G+R L++
Sbjct: 89 DDR-NLFPRAIE-LTQILNPRAVMLENVRGIMGRNFADYRSAIVDSFISLGYRVSWELVT 146
Query: 134 PTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFETS 168
FGVP R R L+A + EA F F +
Sbjct: 147 SADFGVPQLRPRAVLVALK-----DGEADFEFPSG 176
>gi|386746541|ref|YP_006219758.1| type II DNA modification enzyme [Helicobacter pylori HUP-B14]
gi|384552790|gb|AFI07738.1| type II DNA modification enzyme [Helicobacter pylori HUP-B14]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + Y I I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + +R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQNRERLYIVGFRKDLKH 164
>gi|420434326|ref|ZP_14933329.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420508527|ref|ZP_15007033.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420510058|ref|ZP_15008554.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420533508|ref|ZP_15031868.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420535509|ref|ZP_15033854.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536887|ref|ZP_15035223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420538593|ref|ZP_15036918.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420538955|ref|ZP_15037274.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|420542580|ref|ZP_15040876.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393049802|gb|EJB50767.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393115319|gb|EJC15830.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393116585|gb|EJC17090.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393137410|gb|EJC37795.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393139794|gb|EJC40168.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393141562|gb|EJC41926.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393142847|gb|EJC43195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393146640|gb|EJC46965.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|393160150|gb|EJC60398.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 319
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL L+ V +IN A Y+ F T+ G ++ I+ + DV++ P
Sbjct: 17 RLGLERCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR---IDPNDLPDFDVLVSGFP 73
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD---LITSM 119
CQ F+ G +K + D R T + LI I + +C LLENVKG + ++ I
Sbjct: 74 CQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQETFKTIIKA 132
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
L AG+ +L+ F + R R Y++ R
Sbjct: 133 LQEAGYTTHYQILNSADFQLAQKRERLYIVGFRK 166
>gi|421781437|ref|ZP_16217903.1| modification methylase XorII [Serratia plymuthica A30]
gi|407756341|gb|EKF66458.1| modification methylase XorII [Serratia plymuthica A30]
Length = 388
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 16 AIDINTSANSVYKHNFPRTNLRGRNIQSFSIEE----INAMSPDVILMSPPCQPFTRTGL 71
A+DI++ S YK NFP T++ ++ FS + D ++ PPCQ F+R G
Sbjct: 31 AVDIDSDLQSAYKRNFPNTHVINGDLSLFSKNTWEFILGDNEIDGVIGGPPCQGFSRMG- 89
Query: 72 QKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTRAGFRFQ--- 128
K + D +L Y I + ++ENV+G SR+ + S + ++
Sbjct: 90 -KKLKDDPRNSLVYHFYRHVDIIRPKFFIMENVEGILDKDSRESLFSAIELVSKNYKIIG 148
Query: 129 EFLLSPTQFGVPNSRTRYYLIAKR 152
++ + +G P R R +I R
Sbjct: 149 PIVIDASNYGAPTIRKRVIVIGYR 172
>gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 358
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL+ F L V A +I+ A Y NF NL G I E N D++L P
Sbjct: 22 RLAKIDFDL--VFASEIDRFAQKSYSSNFDTDNLYG---DITKINEKNIPDHDLLLAGFP 76
Query: 63 CQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF---EGSRSRDLITSM 119
CQ F+ G +K D R T L Y + I + LLENVK + SR+ + +
Sbjct: 77 CQSFSIAGKRKGFEDTRGT-LFYDVARILNEKKPKLFLLENVKNLISHDSSRTIKQMLKI 135
Query: 120 LTRAGFRFQEFLLSPTQFGVPNSRTRYYL 148
L + +++ + GVP +R R Y+
Sbjct: 136 LNDLNYTVDFTIINSVESGVPQNRERTYI 164
>gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 464
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSP--DVILMSPPCQPFTRTGLQKDI 75
+I+ A VY+ NF + L I + +I+ + D I+ PCQP++ G +
Sbjct: 60 EIDKQAIQVYQQNF-ISYLNSNEIAFGDVSKISNLPDNLDFIVGGVPCQPWSVAGCLRGF 118
Query: 76 ADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR---DLITSMLTRAGFRFQEFLL 132
D R +I+ + + + ENV G R+R +LI LT G++ LL
Sbjct: 119 EDPRGKLWFDVIKLVQK-SQPKSFIFENVSGLASPRNRENLELIIDELTGCGYQVYWQLL 177
Query: 133 SPTQFGVPNSRTRYYLIAKRS 153
+ FG+P +R R +++ R
Sbjct: 178 NAYDFGLPQNRERVFIVGIRK 198
>gi|383480314|ref|YP_005389208.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|383494296|ref|YP_005411972.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
gi|378928304|gb|AFC66510.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|378930023|gb|AFC68440.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
Length = 395
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF-----EG 109
D+++ PPCQ F+ G +++ D R + IE + + Q L ENV+GF E
Sbjct: 81 DLVVGGPPCQGFSIAG-KRENNDIRNQLMHSYIELVKLVDP-QMLFFENVQGFTIDFREN 138
Query: 110 SRSRD---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE 166
+ ++ ++ L + G++ +++ ++FG+P +R R+ L A ++ E+ FE
Sbjct: 139 GKRKNYSAILAEDLKKLGYKINSQIVTMSEFGIPQNRKRFILFASKN----REESQLFFE 194
>gi|79835495|gb|ABB52098.1| Mod [Arthrospira platensis]
Length = 412
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGR-NIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
+I ++ VY+HNF R R N+ + D+I PCQP++ G + +
Sbjct: 43 EIEPNSIQVYQHNFIRYANRDEPNLGDMRSLHKFPFTVDLITGGVPCQPWSIAGKLRGLD 102
Query: 77 DARCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRSRDLITSM---LTRAGFRFQEFL 131
D R ++TI I Q L +LENVKG R R S+ L+ A + + +
Sbjct: 103 DPRG---QLWLDTIRVIKINQPLAFILENVKGLTDPRHRPQFESILESLSAANYHLKWQV 159
Query: 132 LSPTQFGVPNSRTRYYLIAKRSPAAHSSEASF 163
L+ + FG+P R R +++ R F
Sbjct: 160 LNASDFGLPQDRDRVFIVGIRRDINQGQNFQF 191
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 7 HAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAM------SPDVILMS 60
H E + AID+N A + Y+HN+P+T +I+ + E+ ++
Sbjct: 20 HLAGFESICAIDVNAKALATYQHNYPKTRTFQEDIRKVNPSELRLYLGLQREELTALIGG 79
Query: 61 PPCQPFTRT--GLQKDIADARCTALSYLIETIPAIPSLQCLLLENV----KGFEGSRSRD 114
PPCQ F+R + + D+R + + L +++ENV K + G RD
Sbjct: 80 PPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLH-VVMENVPEILKAYNGI-IRD 137
Query: 115 LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
I + L G++ L+ +GVP +R+R + +A
Sbjct: 138 EIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLA 173
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLR---GRNIQSFSIEEINAMSP-----DVILMSPPCQP 65
A+D + A + NFP +LR G + +E++ + P D++ PPCQP
Sbjct: 66 AAAVDFDERALETHAANFPGMSLRMDLGNPAERDRLEQV--LEPAKGKIDLVAGGPPCQP 123
Query: 66 FTRTGLQK----------DIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD- 114
F+R G K D D R S ++ + I + +L+ENV D
Sbjct: 124 FSRAGRSKIRSLVEHHGRDAHDLRKELWSAYLDVVKRIKP-RAVLMENVPDM--GLGDDF 180
Query: 115 ----LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFE---T 167
+I L G+ Q L+ ++GVP R R L+A+ + E T
Sbjct: 181 FVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLILLARNDIEKFEWQQEVTEEERTT 240
Query: 168 SSELMTELPKLK 179
S + +LP LK
Sbjct: 241 LSHAIGDLPPLK 252
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIE-EINAMSP-------- 54
L+ +EVV A++ N A + Y+HNF + G E +I A+SP
Sbjct: 25 LAARNLGIEVVAALENNHYAAATYRHNF----IEGSRRPPLLFEGDILAISPEAFMQAAN 80
Query: 55 ------DVILMSPPCQPFTRTGLQ-KDIADARCTALSYLIETIPAIPSLQCLLLENVKGF 107
D+I+ PPCQ F+ ++ I D R T L E + AI + L+ENV G
Sbjct: 81 LTPGGVDIIMGGPPCQGFSTHRIKGAGIDDPRNTLLLRYFEYVQAI-RPRYFLVENVPGL 139
Query: 108 EGSRSRDLIT---SMLTRAGFRFQ-EFLLSPTQFGVPNSRTRYYLIA 150
R + + + T AG+ +L+ +GVP +R R +++
Sbjct: 140 LWPRHEEYLQRFYKLATEAGYHVSPPQVLNARDYGVPQNRKRVFILG 186
>gi|444375219|ref|ZP_21174516.1| type II DNA modification enzyme [Helicobacter pylori A45]
gi|443620253|gb|ELT80702.1| type II DNA modification enzyme [Helicobacter pylori A45]
Length = 313
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + Y I I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTII-YGIIRILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 ---LITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|428220506|ref|YP_007104676.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427993846|gb|AFY72541.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 341
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 18 DINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIAD 77
DI+ A YK NF + +I S +I D++L PCQPF+ G K D
Sbjct: 39 DIDPDAQVAYKSNFDEVTVG--DITKVSTSDIP--DHDILLAGFPCQPFSICGDLKGFED 94
Query: 78 ARCTALSYLIETIPAIPSLQCLLLENVKGFEG---SRSRDLITSMLTRAGFRFQEFLLSP 134
R T L + I I + +LENVK +G ++ I L G+ +L+
Sbjct: 95 VRGT-LFFDIARILEAKQPKAFVLENVKQLKGHNEGKTLQRILQTLQELGYHTDYKILNA 153
Query: 135 TQFGVPNSRTRYYLIA 150
+G+P R R ++I
Sbjct: 154 LNYGLPQKRERIFIIG 169
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 14 VTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI------NAMSPDVILMSPPCQPFT 67
V A DI+ A + +N P ++++ + E+ A DVI PPCQ F+
Sbjct: 26 VCANDIDEEAKHTFTYNHPTVPFVLKDVREVTAAELLAAANCTAAEIDVITGGPPCQGFS 85
Query: 68 RTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKG---FEGSRSRDLITSMLTRAG 124
G Q+ D R T + I A + L ENV G + R I + + G
Sbjct: 86 LAG-QRLSDDPRNTLFREYVR-IAADIRPRVLFFENVHGIMNMQNGRVLKAIVTEFEKIG 143
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKRS 153
++ + L++ +GVP +R R+ LI R
Sbjct: 144 YQCKYNLVNAADYGVPQARPRFVLIGIRG 172
>gi|350272585|ref|YP_004883893.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
gi|348597427|dbj|BAL01388.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
Length = 411
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 9 FSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSF---------SIEEINAMS----PD 55
+ E V A D++ +A +VYK NF + I+++ S E N +S D
Sbjct: 89 YKFEAVLAADLDETALNVYKKNFSPQFALDKPIETYIDSNIGDPLSDYERNFISMVGNVD 148
Query: 56 VILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSR-- 113
V++ PPCQ + +D R +I I + +L+ENV G + +
Sbjct: 149 VLIGGPPCQGNSDLNNHTRRSDPRNLLYLRMIRC-AEIVKPKYILIENVPGVQHDKHGVV 207
Query: 114 DLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEA 161
D+ S L G+R ++ + GVP R R++LIA ++ S A
Sbjct: 208 DIAKSTLEDMGYRLDSGIIDMSAIGVPQKRKRFFLIASKTEDVSLSNA 255
>gi|291551321|emb|CBL27583.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 595
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 27/181 (14%)
Query: 51 AMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF--- 107
A D+ + PCQ F+ G Q+ + D R T I I + + ENVK
Sbjct: 285 AGQVDLFVGGSPCQSFSLVGKQRGLDDTRGTLFYEYARLIDEIKP-KIFIYENVKAVTTH 343
Query: 108 EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAHSSEASFCFET 167
+G ++ + + + + G++F +L+ +G+P +R R +++ R + + SF
Sbjct: 344 DGGKTWEKMQQVFSELGYKFTWSILNSKNYGIPQNRERLFVVGFREDLELAKKFSF---- 399
Query: 168 SSELMTELPKLKANTCNPLLSRMTLHGILDSTHPSGDLYRR----YLVSDKDLLRRFHVF 223
NP+ R + L P G + ++ +K+L +RF
Sbjct: 400 ---------------PNPIPLRKKMKDFLMDNAPGGYFLPKKGVEFVTKEKNLSKRFTQI 444
Query: 224 D 224
D
Sbjct: 445 D 445
>gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC
35316]
gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC
35316]
Length = 355
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI----NAMSPDVILMS--PPC 63
+ EV++A++ N SA +K N + +L +I+ S +EI S ++ L++ PPC
Sbjct: 22 NFEVISAVENNISAAETFKANNRKCHLFQEDIRFISSQEIMDKVGIKSGELSLLAGCPPC 81
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGF--EGSRSRDLITSMLT 121
Q F+ + D R + +S + + + + +++ENV G +GS D + L
Sbjct: 82 QGFSSLTKNYNPKDKRNSLISEVSRLVKGLMP-KAIMIENVPGLMTKGSDFLDNFINDLQ 140
Query: 122 RAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
G++ +L +GVP R R+ L+A
Sbjct: 141 SLGYKVDYKVLQVADYGVPQDRKRFVLLA 169
>gi|386748708|ref|YP_006221916.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554950|gb|AFI06706.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 317
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRT 69
E+V A D + A YK N + + G + E+ N D+++ PCQPF+
Sbjct: 21 GFEIVWANDFDKYAVKTYKANISQNIVLGDILN----EKDNIGKHDILIGGFPCQPFSTL 76
Query: 70 GLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSM---LTRAGFR 126
G K D R T + E I + ++LENVK + + L R ++
Sbjct: 77 GALKGFDDKRGTLFFTICEIIEKHKP-KMVVLENVKNLINHNKGETFKRILFELDRLNYQ 135
Query: 127 FQEFLLSPTQFGVPNSRTRYYLIA 150
+L+ FG+P R R +++A
Sbjct: 136 VNYEILNTLDFGLPQQRNRVFIVA 159
>gi|327311917|ref|YP_004338814.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
gi|326948396|gb|AEA13502.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 10 SLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI--NAMSPDVILMSPPCQPFT 67
VV ++I+ +A Y +NFPR + ++ S S E+ + DV++ PC+PFT
Sbjct: 22 GFRVVLGVEIDANAARTYSYNFPRAVVLEEDVASISYREVERHVGKVDVVIGGSPCEPFT 81
Query: 68 RTG---LQKDIADARCTALSYL-IETIPAIPSLQ--CLLLENVKGFEGSRSRDLITSMLT 121
T ++ + L L + I + LQ +LENV G R+ +
Sbjct: 82 ATNPRRMENPLDRLYTDPLGQLTLHFIRLVGELQPRIFVLENVPGIAQGPLREALEREFK 141
Query: 122 RAGFRFQEF-LLSPTQFGVPNSRTRYYL 148
R GF F +L GVP+ R R ++
Sbjct: 142 RVGFDEIYFNILLAENHGVPSHRKRVFI 169
>gi|291570812|dbj|BAI93084.1| cytosine-specific DNA methyltransferase [Arthrospira platensis
NIES-39]
Length = 443
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 18 DINTSANSVYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
+I ++ VY+HNF R N N+ + D+I PCQP++ G + +
Sbjct: 43 EIEPNSIQVYQHNFIRYANRDEPNLGDMRSLHKFPFTVDLITGGVPCQPWSIAGKLRGLD 102
Query: 77 DARCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRSRDLITSM---LTRAGFRFQEFL 131
D R ++TI I Q L +LENVKG R R S+ L+ A + + +
Sbjct: 103 DPRG---QLWLDTIRVIKINQPLAFILENVKGLTDPRHRPQFESILESLSAANYHLKWQV 159
Query: 132 LSPTQFGVPNSRTRYYLIAKR 152
L+ + FG+P R R +++ R
Sbjct: 160 LNASDFGLPQDRDRVFIVGIR 180
>gi|160894995|ref|ZP_02075769.1| hypothetical protein CLOL250_02545 [Clostridium sp. L2-50]
gi|156863426|gb|EDO56857.1| DNA (cytosine-5-)-methyltransferase [Clostridium sp. L2-50]
Length = 447
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 39 RNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQC 98
RNI++ + + D++ PCQ F+ G ++ ADAR T L + + + A
Sbjct: 74 RNIETERMPDF-----DLLCAGFPCQAFSIAGRREGFADARGT-LFFEVARLVADKRPAY 127
Query: 99 LLLENVKGF---EGSRSRDLITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
LLENV G + R+ I S L+ G+ + +L+ FGVP SR R Y++
Sbjct: 128 FLLENVPGLLSHDKGRTFHTILSTLSELGYHVEWKVLNSKDFGVPQSRKRVYIVG 182
>gi|409992352|ref|ZP_11275548.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|409936793|gb|EKN78261.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 443
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 18 DINTSANSVYKHNFPR-TNLRGRNIQSFSIEEINAMSPDVILMSPPCQPFTRTGLQKDIA 76
+I ++ VY+HNF R N N+ + D+I PCQP++ G + +
Sbjct: 43 EIEPNSIQVYQHNFIRYANRDEPNLGDMRSLHKFPFTVDLITGGVPCQPWSIAGKLRGLD 102
Query: 77 DARCTALSYLIETIPAIPSLQCL--LLENVKGFEGSRSRDLITSM---LTRAGFRFQEFL 131
D R ++TI I Q L +LENVKG R R S+ L+ A + + +
Sbjct: 103 DPRG---QLWLDTIRVIKINQPLAFILENVKGLTDPRHRPQFESILESLSAANYHLKWQV 159
Query: 132 LSPTQFGVPNSRTRYYLIAKR 152
L+ + FG+P R R +++ R
Sbjct: 160 LNASDFGLPQDRDRVFIVGIR 180
>gi|421720135|ref|ZP_16159418.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407220174|gb|EKE89982.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIR-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTTYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|402311123|ref|ZP_10830074.1| putative modification methylase HhaI [Eubacterium sp. AS15]
gi|400365859|gb|EJP18903.1| putative modification methylase HhaI [Eubacterium sp. AS15]
Length = 314
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSL----QCLLLENVKGFEGS 110
D+++ PCQ F+R G +K T S L ET+ I + + +L ENVKG
Sbjct: 72 DLLMHGSPCQDFSRIGQKKGGVKGTGTRSSLLFETVRIIEEMNMRPKVVLWENVKGV--- 128
Query: 111 RSRDLITSM------LTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA------------KR 152
+D+ TS + R G+ + +L+ FG+P +R R ++++ ++
Sbjct: 129 LDKDMRTSFFQYLDEMERLGYENKYKVLNAMDFGIPQNRERIFVVSILGKNNFDFEKLEK 188
Query: 153 SPAAHSSE 160
P H SE
Sbjct: 189 IPTKHISE 196
>gi|420458769|ref|ZP_14957578.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393074112|gb|EJB74873.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIH-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTAYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|420452494|ref|ZP_14951337.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-6]
gi|393067056|gb|EJB67869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-6]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 55 DVILMSPPCQPFTRTGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRD 114
D ++ PCQ F+ G +K + D R T + LI I + +C LLENVKG + ++
Sbjct: 60 DALISGFPCQAFSINGKRKGLEDERGTIIYGLIH-ILKVKQPKCFLLENVKGLIHHKQQE 118
Query: 115 L---ITSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIAKRSPAAH 157
I L AG+ +L+ F + R R Y++ R H
Sbjct: 119 TFKTIIKALQEAGYTAYYQILNSADFQLAQKRERLYIVGFRKDLKH 164
>gi|256822924|ref|YP_003146887.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
gi|256796463|gb|ACV27119.1| DNA-cytosine methyltransferase [Kangiella koreensis DSM 16069]
Length = 419
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 3 RLSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPP 62
RL + V + + +A + YK NF +I + E N D++L P
Sbjct: 110 RLGFQKYGGACVFSSEFEKAAQNTYKENFGEHPFG--DITTVPSE--NIPKHDILLGGFP 165
Query: 63 CQPFTRTGLQKDIADARCTA-LSYLIETIPAIPSLQCLLLENVK---GFEGSRSRDLITS 118
CQ F+ G ++ +D + L + I I + LLENVK G +G + +I
Sbjct: 166 CQAFSVAGYREGFSDKKGRGNLFFKIHDIIKTKKPEAFLLENVKNLQGHDGGNTFKVIVE 225
Query: 119 MLTRAGFRFQEFLLSPTQFG-VPNSRTRYYLIAKRSPA 155
L +G+ +L+ FG VP +R R Y+I + A
Sbjct: 226 YLHESGYSVISNVLNSMDFGDVPQNRERIYIIGFKDEA 263
>gi|254825117|ref|ZP_05230118.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194]
gi|293594360|gb|EFG02121.1| DNA-cytosine methyltransferase [Listeria monocytogenes FSL J1-194]
Length = 326
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 4 LSNHAFSLEVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEINAMSPDVILMSPPC 63
L N + + ++I+ A Y + +T IQ S+ N + PD+++ PC
Sbjct: 20 LINLGIEHKSIDYVEIDEKAVRAYNALYDKT------IQPQSVVGYN-LRPDLLIHGSPC 72
Query: 64 QPFTRTGLQKDIADARCTALSYLIETIPAIPSL-----QCLLLENVKGFEGSRSRDLI-- 116
Q F+R G + T S L ET+ I ++ + +L ENVKG RD+I
Sbjct: 73 QDFSRAGHRWGGGSEDKTRSSLLFETLKIIQNMGAWKPRVVLWENVKGV---LDRDMIHA 129
Query: 117 ----TSMLTRAGFRFQEFLLSPTQFGVPNSRTRYYLIA 150
+ + G+ +L+P FG+P R R Y ++
Sbjct: 130 FKDYLAQMEAMGYTNSYEVLNPMDFGIPQKRERIYTVS 167
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 12 EVVTAIDINTSANSVYKHNFPRTNLRGRNIQSFSIEEI---NAMSPDVILMSPPCQPFTR 68
E++ A D+ A YK N G +I ++E+ N D+++ PCQ F+
Sbjct: 26 EIIWANDLYEDAAETYKKNI------GNHIVLKDLKEVDTNNIPDGDIVIGGFPCQGFSV 79
Query: 69 TGLQKDIADARCTALSYLIETIPAIPSLQCLLLENVKGFEGSRSRDLITSMLTR----AG 124
+ + + D R T ++ I + + ENVKG S + + M+ + AG
Sbjct: 80 ANMNRSVDDERNTLYLEMLRVIQD-KQPKFFVAENVKGIL-SLGKGAVIKMICKDFENAG 137
Query: 125 FRFQEFLLSPTQFGVPNSRTRYYLIAKR 152
+ Q LL+ +GVP +R R +++ R
Sbjct: 138 YNVQYKLLNAADYGVPQTRQRVFIVGVR 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,529,312,360
Number of Sequences: 23463169
Number of extensions: 131556522
Number of successful extensions: 294151
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 2719
Number of HSP's that attempted gapping in prelim test: 291685
Number of HSP's gapped (non-prelim): 3227
length of query: 250
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 111
effective length of database: 9,097,814,876
effective search space: 1009857451236
effective search space used: 1009857451236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)