Query psy3546
Match_columns 164
No_of_seqs 165 out of 879
Neff 3.2
Searched_HMMs 29240
Date Fri Aug 16 19:25:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3546.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3546hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ubt_Y Modification methylase 100.0 3.2E-29 1.1E-33 204.1 6.6 94 3-116 66-162 (331)
2 4h0n_A DNMT2; SAH binding, tra 99.9 6.3E-27 2.2E-31 198.9 8.3 93 3-114 74-167 (333)
3 1g55_A DNA cytosine methyltran 99.9 1.1E-26 3.7E-31 196.1 6.6 96 3-116 73-168 (343)
4 3qv2_A 5-cytosine DNA methyltr 99.9 3.4E-26 1.1E-30 194.3 9.2 92 3-114 81-178 (327)
5 2c7p_A Modification methylase 99.9 2.4E-26 8.2E-31 194.3 7.2 94 3-116 76-172 (327)
6 4ft4_B DNA (cytosine-5)-methyl 99.9 2.4E-25 8.1E-30 202.5 8.5 93 4-116 385-484 (784)
7 3g7u_A Cytosine-specific methy 99.9 2.2E-25 7.5E-30 191.8 5.8 93 3-117 76-172 (376)
8 4dkj_A Cytosine-specific methy 99.9 6.9E-25 2.4E-29 191.9 8.5 94 3-116 130-237 (403)
9 3me5_A Cytosine-specific methy 99.8 4.2E-22 1.5E-26 178.1 5.8 94 3-117 174-288 (482)
10 3swr_A DNA (cytosine-5)-methyl 99.8 6E-22 2.1E-26 190.6 3.8 93 3-115 623-720 (1002)
11 3av4_A DNA (cytosine-5)-methyl 99.8 1.2E-21 4E-26 193.0 4.4 94 3-116 934-1032(1330)
12 2qrv_A DNA (cytosine-5)-methyl 99.8 1.8E-20 6.2E-25 157.5 6.1 89 3-114 88-180 (295)
13 2qrv_B DNA (cytosine-5)-methyl 99.7 1.3E-18 4.5E-23 145.0 6.5 81 4-113 87-170 (230)
14 2pv0_B DNA (cytosine-5)-methyl 99.7 1.8E-18 6.3E-23 153.2 6.5 81 4-113 243-326 (386)
15 2igt_A SAM dependent methyltra 85.7 0.42 1.4E-05 39.8 2.6 46 61-106 266-313 (332)
16 2fgc_A Acetolactate synthase, 72.7 4.2 0.00014 32.9 4.4 40 56-102 29-69 (193)
17 2pc6_A Probable acetolactate s 61.2 5.3 0.00018 31.2 2.8 41 56-103 4-45 (165)
18 2f06_A Conserved hypothetical 58.4 11 0.00037 26.9 3.9 40 56-102 6-46 (144)
19 2f1f_A Acetolactate synthase i 50.0 13 0.00043 28.9 3.3 39 57-102 4-43 (164)
20 3lcc_A Putative methyl chlorid 48.2 59 0.002 23.9 6.6 41 75-115 185-225 (235)
21 3d2l_A SAM-dependent methyltra 47.6 31 0.0011 25.2 5.0 39 76-115 202-242 (243)
22 3c0k_A UPF0064 protein YCCW; P 44.1 33 0.0011 28.5 5.1 44 61-104 333-379 (396)
23 1y8c_A S-adenosylmethionine-de 42.6 39 0.0013 24.5 4.8 40 76-116 204-245 (246)
24 3ap1_A Protein-tyrosine sulfot 42.0 5.5 0.00019 32.7 0.1 27 77-106 291-317 (337)
25 2zgi_A Putative 4-amino-4-deox 41.6 54 0.0018 25.7 5.8 43 64-112 174-216 (246)
26 3cgg_A SAM-dependent methyltra 41.0 46 0.0016 23.0 4.8 40 75-114 153-193 (195)
27 1wzn_A SAM-dependent methyltra 36.3 58 0.002 24.1 5.0 39 77-116 212-250 (252)
28 3n8h_A Pantothenate synthetase 34.7 44 0.0015 28.3 4.5 51 52-104 17-67 (264)
29 1wn9_A The hypothetical protei 34.6 24 0.00083 27.4 2.6 30 72-101 69-99 (131)
30 2i62_A Nicotinamide N-methyltr 34.6 75 0.0026 23.5 5.3 41 76-116 218-261 (265)
31 3e8s_A Putative SAM dependent 33.8 58 0.002 23.2 4.4 38 76-115 188-226 (227)
32 2wk1_A NOVP; transferase, O-me 33.1 79 0.0027 26.1 5.7 58 4-89 76-133 (282)
33 3ouv_A Serine/threonine protei 29.6 47 0.0016 21.2 3.1 25 64-92 9-33 (71)
34 1vpt_A VP39; RNA CAP, poly(A) 28.6 62 0.0021 28.7 4.5 34 70-103 83-116 (348)
35 3pfg_A N-methyltransferase; N, 28.4 58 0.002 24.5 3.8 19 76-94 216-234 (263)
36 2g72_A Phenylethanolamine N-me 27.7 54 0.0019 25.2 3.6 40 76-115 235-278 (289)
37 3inn_A Pantothenate synthetase 26.6 62 0.0021 28.0 4.1 53 52-106 35-88 (314)
38 3bxo_A N,N-dimethyltransferase 26.4 41 0.0014 24.5 2.6 19 76-94 206-224 (239)
39 3zth_A STU0660; DNA binding, c 23.5 71 0.0024 28.3 3.9 62 26-102 179-242 (350)
40 3q12_A Pantoate--beta-alanine 23.3 59 0.002 27.7 3.3 52 51-104 16-68 (287)
41 3dtn_A Putative methyltransfer 23.1 41 0.0014 24.6 2.1 28 76-103 193-220 (234)
42 2nrk_A Hypothetical protein GR 22.7 46 0.0016 25.6 2.3 55 45-112 38-94 (173)
43 3mag_A VP39; methylated adenin 22.5 97 0.0033 26.9 4.5 33 70-102 68-100 (307)
44 2a14_A Indolethylamine N-methy 22.2 1.2E+02 0.004 23.2 4.6 41 76-116 217-260 (263)
45 3mxt_A Pantothenate synthetase 22.0 60 0.002 27.7 3.1 35 70-105 34-68 (285)
46 3vhj_A BFPC; type IV pilus bio 21.8 25 0.00087 28.3 0.7 43 76-119 115-163 (172)
47 2zfu_A Nucleomethylin, cerebra 20.9 2.1E+02 0.0071 20.5 5.5 22 76-97 158-179 (215)
48 3q71_A Poly [ADP-ribose] polym 20.5 62 0.0021 26.1 2.8 37 1-39 149-185 (221)
49 2gek_A Phosphatidylinositol ma 20.5 2.3E+02 0.0079 21.8 6.0 41 60-100 22-64 (406)
50 3p45_A Caspase-6; protease, hu 20.4 1.7E+02 0.0059 22.9 5.3 19 76-94 70-88 (179)
51 4fbl_A LIPS lipolytic enzyme; 20.4 1.1E+02 0.0037 23.0 3.9 35 68-104 57-92 (281)
52 3fpn_B Geobacillus stearotherm 20.1 32 0.0011 24.5 0.9 27 76-102 24-50 (106)
No 1
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=99.95 E-value=3.2e-29 Score=204.05 Aligned_cols=94 Identities=18% Similarity=0.179 Sum_probs=84.3
Q ss_pred CcCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC---chHHHH
Q psy3546 3 SIDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG---SRSRDL 79 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~---s~~~d~ 79 (164)
+-|||||+||.+|++++.+|+|+.||.+++++|.+++ |+ +|+||||+||.+ +..++.
T Consensus 66 ~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~----Pk----------------~~~~ENV~gl~~~~~~~~~~~ 125 (331)
T 3ubt_Y 66 IGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKK----PI----------------FFLAENVKGMMAQRHNKAVQE 125 (331)
T ss_dssp ECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHC----CS----------------EEEEEECCGGGGCTTSHHHHH
T ss_pred EecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccC----Ce----------------EEEeeeecccccccccchhhh
Confidence 4689999999999999999999999999999999998 68 559999999975 468999
Q ss_pred HHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 80 ITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 80 I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
|++.|.++||.+.+.+|||+||||||.|+|+++.+.+
T Consensus 126 i~~~l~~~GY~v~~~vlna~~yGvPQ~R~Rvfivg~r 162 (331)
T 3ubt_Y 126 FIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIGFR 162 (331)
T ss_dssp HHHHHHHHTEEEEEEEEEGGGTTCSBCCEEEEEEEEE
T ss_pred hhhhhccCCcEEEEEecccccCCCCcccceEEEEEEc
Confidence 9999999999999999999999999999555554444
No 2
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=99.93 E-value=6.3e-27 Score=198.89 Aligned_cols=93 Identities=28% Similarity=0.399 Sum_probs=84.5
Q ss_pred CcCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHHHH
Q psy3546 3 SIDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLITS 82 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I~s 82 (164)
.-|||||+||.+|.+++.+|+|+.||.+++++|.+++ +|+ +|+||||+||.++..++.|++
T Consensus 74 ~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~---~P~----------------~~vlENV~gl~~~~~~~~i~~ 134 (333)
T 4h0n_A 74 LMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLD---NVD----------------YILMENVKGFENSTVRNLFID 134 (333)
T ss_dssp EECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCT---TCC----------------EEEEEECTTGGGSHHHHHHHH
T ss_pred EecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhc---CCC----------------EEEEecchhhhhhhHHHHHHH
Confidence 4589999999999999999999999999999999996 167 559999999999999999999
Q ss_pred HHHhCCCeEEEEEeCCCCCCCCCcc-eEEEecc
Q psy3546 83 MLTRAGFRFQEFLLSPTQFGTSLYT-EWLRNKK 114 (164)
Q Consensus 83 ~L~~~GY~v~~~lLnatdfGVPQ~R-r~~i~~r 114 (164)
.|+++||.+.+.+|||.+|||||.| |+|+++.
T Consensus 135 ~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~ 167 (333)
T 4h0n_A 135 KLKECNFIYQEFLLCPSTVGVPNSRLRYYCTAR 167 (333)
T ss_dssp HHHHTTEEEEEEEECTTTTTCSCCCCEEEEEEE
T ss_pred HHHhCCCeEEEEEecHHHcCCCccceEEEEEEE
Confidence 9999999999999999999999999 5555554
No 3
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=99.93 E-value=1.1e-26 Score=196.06 Aligned_cols=96 Identities=29% Similarity=0.393 Sum_probs=67.7
Q ss_pred CcCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHHHH
Q psy3546 3 SIDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLITS 82 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I~s 82 (164)
..|+|||+||.+|.+++.+|+|+.||.+++++|.+++ .+|+ +|+||||+||..+.+++.|++
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~--~~P~----------------~~~~ENV~~l~~~~~~~~i~~ 134 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQ--KLPK----------------YILLENVKGFEVSSTRDLLIQ 134 (343)
T ss_dssp EECCC------------------CHHHHHHHHGGGCS--SCCS----------------EEEEEEETTGGGSHHHHHHHH
T ss_pred EEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhc--CCCC----------------EEEEeCCccccCHHHHHHHHH
Confidence 4699999999999999999999999999999999997 1367 459999999998899999999
Q ss_pred HHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 83 MLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 83 ~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
.|.++||.+.+.+|||.||||||.|+|+++.+.+
T Consensus 135 ~l~~~GY~v~~~vl~a~~~GvPQ~R~R~~iv~~~ 168 (343)
T 1g55_A 135 TIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKL 168 (343)
T ss_dssp HHHHTTEEEEEEEECGGGGTCSCCCCEEEEEEEE
T ss_pred HHHHCCCeeEEEEEEHHHCCCCCcccEEEEEEEe
Confidence 9999999999999999999999999444444443
No 4
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=99.93 E-value=3.4e-26 Score=194.35 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=84.2
Q ss_pred CcCCCCCcc--cccCcCCCCCCccchHHHHHHH-hcccc--CCCCCCCchhhhhhhccccccceEEEeecCcCCCCchHH
Q psy3546 3 SIDYASNSD--PGTGLQKDIADARCTALSYLIE-TIPAN--FPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSR 77 (164)
Q Consensus 3 ~~~fPCQ~F--S~aG~rkd~~D~R~~L~~~~ir-iI~~~--~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~ 77 (164)
..|+|||+| |.+|.+++.+|+|++||.++++ +|.++ + |+ +|+||||+||..+..+
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~----P~----------------~~~lENV~gl~~~~~~ 140 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINK----PK----------------HIFIENVPLFKESLVF 140 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSC----CS----------------EEEEEECGGGGGSHHH
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccC----CC----------------EEEEEchhhhcChHHH
Confidence 458999999 9999999999999999999999 99998 5 78 5599999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEeCCCCCCCCCcc-eEEEecc
Q psy3546 78 DLITSMLTRAGFRFQEFLLSPTQFGTSLYT-EWLRNKK 114 (164)
Q Consensus 78 d~I~s~L~~~GY~v~~~lLnatdfGVPQ~R-r~~i~~r 114 (164)
+.|++.|+++||.+.+.+|||.+|||||.| |+|+++.
T Consensus 141 ~~i~~~l~~~GY~v~~~vl~a~~yGvPQ~R~R~fivg~ 178 (327)
T 3qv2_A 141 KEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMAR 178 (327)
T ss_dssp HHHHHHHHHTTCEEEEEEECGGGGTCSBCCCEEEEEEE
T ss_pred HHHHHHHHhCCCEEEEEEEeHHHcCCCccceEEEEEEE
Confidence 999999999999999999999999999999 5555543
No 5
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=99.93 E-value=2.4e-26 Score=194.27 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=83.8
Q ss_pred CcCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC---chHHHH
Q psy3546 3 SIDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG---SRSRDL 79 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~---s~~~d~ 79 (164)
..|+|||+||.+|.+++.+|+|+.||.+++++|.+++ |+ +|+||||+||.. +..++.
T Consensus 76 ~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~----P~----------------~~~~ENV~gl~~~~~~~~~~~ 135 (327)
T 2c7p_A 76 CAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKK----PK----------------VVFMENVKNFASHDNGNTLEV 135 (327)
T ss_dssp EEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHC----CS----------------EEEEEEEGGGGTGGGGHHHHH
T ss_pred EECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhcc----Cc----------------EEEEeCcHHHHhccccHHHHH
Confidence 4689999999999999999999999999999999998 68 559999999975 357999
Q ss_pred HHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 80 ITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 80 I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
|++.|.++||.+.+.+|||++|||||.|+|+++.+.+
T Consensus 136 i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~~iv~~~ 172 (327)
T 2c7p_A 136 VKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFR 172 (327)
T ss_dssp HHHHHHHTTBCCEEEEEEGGGGTCSBCCEEEEEEEEB
T ss_pred HHHHHHhCCCEEEEEEEEHHHcCCCccceEEEEEEEe
Confidence 9999999999999999999999999999555544443
No 6
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=99.92 E-value=2.4e-25 Score=202.47 Aligned_cols=93 Identities=8% Similarity=-0.006 Sum_probs=81.6
Q ss_pred cCCCCCcccccCcCCC----CCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC---chH
Q psy3546 4 IDYASNSDPGTGLQKD----IADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG---SRS 76 (164)
Q Consensus 4 ~~fPCQ~FS~aG~rkd----~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~---s~~ 76 (164)
-|||||+||.+|++++ .+|+|++||.+|+++|.+++ |+ +|+||||+||.. +..
T Consensus 385 GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~r----Pk----------------~fvlENV~glls~~~g~~ 444 (784)
T 4ft4_B 385 GGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLK----PK----------------YVLMENVVDILKFADGYL 444 (784)
T ss_dssp ECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHHC----CS----------------EEEEEEEGGGGTGGGGHH
T ss_pred ecCCCcchhhhhcccCcCccccCchhHHHHHHHHHHHHHC----CC----------------EEEEEecCCccccccchH
Confidence 3899999999998765 67999999999999999998 68 559999999975 467
Q ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 77 RDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 77 ~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
++.|++.|..+||.+.+.+|||.+|||||.|+|+++.+.+
T Consensus 445 ~~~il~~l~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r 484 (784)
T 4ft4_B 445 GKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGAL 484 (784)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEGGGGTCSSCCEEEEEEEEC
T ss_pred HHHHHHHHHhCCCeeeeeecCHHHcCCCcccccceeeeec
Confidence 9999999999999999999999999999999555544433
No 7
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=99.91 E-value=2.2e-25 Score=191.79 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=75.6
Q ss_pred CcCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCCc---hHHHH
Q psy3546 3 SIDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGS---RSRDL 79 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s---~~~d~ 79 (164)
..|+|||+||.+|++ +.+|+|+.||.+++++|..++ |+ +|+||||+||.+. ..++.
T Consensus 76 ~ggpPCQ~fS~ag~~-~~~d~r~~L~~~~~~~v~~~~----P~----------------~~v~ENV~gl~s~~~~~~~~~ 134 (376)
T 3g7u_A 76 IGGPPCQGFSSIGKG-NPDDSRNQLYMHFYRLVSELQ----PL----------------FFLAENVPGIMQEKYSGIRNK 134 (376)
T ss_dssp EECCCCCTTC--------CHHHHHHHHHHHHHHHHHC----CS----------------EEEEEECTTTTCGGGHHHHHH
T ss_pred EecCCCCCcccccCC-CCCCchHHHHHHHHHHHHHhC----CC----------------EEEEecchHhhccCcHHHHHH
Confidence 469999999999976 889999999999999999998 68 5599999999864 47899
Q ss_pred HHHHHHhCCCeE-EEEEeCCCCCCCCCcceEEEecccch
Q psy3546 80 ITSMLTRAGFRF-QEFLLSPTQFGTSLYTEWLRNKKKKR 117 (164)
Q Consensus 80 I~s~L~~~GY~v-~~~lLnatdfGVPQ~Rr~~i~~rkk~ 117 (164)
|+ .|.++||.+ .+.+|||.||||||.|+|+++.+.+.
T Consensus 135 i~-~l~~~GY~v~~~~vl~a~dyGvPQ~R~R~~iig~r~ 172 (376)
T 3g7u_A 135 AF-NLVSGDYDILDPIKVKASDYGAPTIRTRYFFIGVKK 172 (376)
T ss_dssp HH-HHHHTTEEECCCEEEEGGGGTCSBCCEEEEEEEEEG
T ss_pred HH-HHHcCCCccCcEEEEEHhhCCCCCCCcEEEEEEEeC
Confidence 99 999999999 99999999999999996555555443
No 8
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=99.91 E-value=6.9e-25 Score=191.88 Aligned_cols=94 Identities=17% Similarity=0.240 Sum_probs=82.2
Q ss_pred CcCCCCCcccccCcCCCCCC---ccchHHHHHHHhccc--------cCCCCCCCchhhhhhhccccccceEEEeecCcCC
Q psy3546 3 SIDYASNSDPGTGLQKDIAD---ARCTALSYLIETIPA--------NFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGF 71 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd~~D---~R~~L~~~~iriI~~--------~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf 71 (164)
.-|||||+||.+|.+++.+| +|+.||.+++++|.+ .+ |+ +|+||||+||
T Consensus 130 ~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~~rii~~~~~k~~~~~~----Pk----------------~~l~ENV~gl 189 (403)
T 4dkj_A 130 TYSFPCQDLSVQGLQKGIDKELNTRSGLLWEIERILEEIKNSFSKEEM----PK----------------YLLMENVKNL 189 (403)
T ss_dssp EECCCCTTTCTTSCCCCCCGGGCCSGGGHHHHHHHHHHHHHHSCGGGS----CS----------------EEEEEEEGGG
T ss_pred EEeCCCCCHHHhCCCCCCCccccccchhHHHHHHHHHHhhhhhccccC----CC----------------EEEEecchhh
Confidence 45899999999999999887 999999999999998 55 78 5599999999
Q ss_pred CCc---hHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 72 EGS---RSRDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 72 ~~s---~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
..+ ..++.|++.|+++||.+.+.+|||.+|||||.|+|+++.+.+
T Consensus 190 ~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r 237 (403)
T 4dkj_A 190 LSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIR 237 (403)
T ss_dssp GSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEE
T ss_pred hhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEc
Confidence 875 478999999999999999999999999999999555444443
No 9
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=99.85 E-value=4.2e-22 Score=178.13 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=72.7
Q ss_pred CcCCCCCcccccCcCCC--------C-CCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC
Q psy3546 3 SIDYASNSDPGTGLQKD--------I-ADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG 73 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rkd--------~-~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~ 73 (164)
.-|||||+||.+|.+++ + +|+|++||.+++++|..++ |+ +|+||||+||.+
T Consensus 174 ~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~r----Pk----------------~fvlENV~gl~s 233 (482)
T 3me5_A 174 LAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARR----PA----------------MFVLENVKNLKS 233 (482)
T ss_dssp EEECCCCCC------------------CTTTTSHHHHHHHHHHHHC----CS----------------EEEEEEETTTTT
T ss_pred EecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcC----Cc----------------EEEEeCcHHHhc
Confidence 35899999999996542 2 3899999999999999998 68 559999999976
Q ss_pred ---chHHHHHHHHHHhCCCeEE---------EEEeCCCCCCCCCcceEEEecccch
Q psy3546 74 ---SRSRDLITSMLTRAGFRFQ---------EFLLSPTQFGTSLYTEWLRNKKKKR 117 (164)
Q Consensus 74 ---s~~~d~I~s~L~~~GY~v~---------~~lLnatdfGVPQ~Rr~~i~~rkk~ 117 (164)
+..++.|++.|.++||.+. +.||||.+| |||.|+++++.+.++
T Consensus 234 ~~~g~~f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~-vPQ~R~R~fivg~r~ 288 (482)
T 3me5_A 234 HDKGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHF-LPQHRERIVLVGFRR 288 (482)
T ss_dssp GGGGHHHHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGT-SSBCCEEEEEEEEEG
T ss_pred ccCCcHHHHHHHHHhcCCcEEEeccccCcccceeeecccc-CCccceEEEEEEEec
Confidence 4589999999999999997 579999999 999995555544443
No 10
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.84 E-value=6e-22 Score=190.57 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=80.2
Q ss_pred CcCCCCCcccccCcCC--CCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC---chHH
Q psy3546 3 SIDYASNSDPGTGLQK--DIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG---SRSR 77 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~rk--d~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~---s~~~ 77 (164)
.-|+|||+||.+|.+. +.+|+|+.||.+|+++|.+++ |+ +|+||||+||.. +..+
T Consensus 623 ~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~r----Pk----------------~~llENV~glls~~~~~~~ 682 (1002)
T 3swr_A 623 CGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYR----PR----------------FFLLENVRNFVSFKRSMVL 682 (1002)
T ss_dssp EECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHC----CS----------------EEEEEEEGGGGTTGGGHHH
T ss_pred EEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhC----CC----------------EEEEeccHHHhccCcchHH
Confidence 3589999999999753 457899999999999999998 68 559999999975 4579
Q ss_pred HHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEeccc
Q psy3546 78 DLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKK 115 (164)
Q Consensus 78 d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rk 115 (164)
+.|++.|.++||.+.+.||||.+|||||.|+|+++.+.
T Consensus 683 ~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~ 720 (1002)
T 3swr_A 683 KLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAA 720 (1002)
T ss_dssp HHHHHHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEE
T ss_pred HHHHHHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEE
Confidence 99999999999999999999999999999955444443
No 11
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.83 E-value=1.2e-21 Score=192.97 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=81.0
Q ss_pred CcCCCCCcccccCcC--CCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCC---chHH
Q psy3546 3 SIDYASNSDPGTGLQ--KDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEG---SRSR 77 (164)
Q Consensus 3 ~~~fPCQ~FS~aG~r--kd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~---s~~~ 77 (164)
.-|||||+||.+|++ ++.+|+|+.||.+|+++|..++ |+ +|+||||+||.. +..+
T Consensus 934 ~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~r----Pk----------------~fv~ENV~glls~~~g~~~ 993 (1330)
T 3av4_A 934 CGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYR----PR----------------FFLLENVRNFVSYRRSMVL 993 (1330)
T ss_dssp EECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHC----CS----------------EEEEEEEGGGGTTTTTHHH
T ss_pred EecCCCcccccccccccccccchhhHHHHHHHHHHHHhc----Cc----------------EEEEeccHHHhccCccHHH
Confidence 358999999999975 3457999999999999999998 68 559999999975 3579
Q ss_pred HHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 78 DLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 78 d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
+.|+..|..+||.+.+.||||.+|||||.|+|+++.+.+
T Consensus 994 ~~il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r 1032 (1330)
T 3av4_A 994 KLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1032 (1330)
T ss_dssp HHHHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEEC
T ss_pred HHHHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEec
Confidence 999999999999999999999999999999555554443
No 12
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.81 E-value=1.8e-20 Score=157.49 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=72.2
Q ss_pred CcCCCCCcccccC-cCCCCCCccchHHHHHHHhccccCCC---CCCCchhhhhhhccccccceEEEeecCcCCCCchHHH
Q psy3546 3 SIDYASNSDPGTG-LQKDIADARCTALSYLIETIPANFPG---DRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRD 78 (164)
Q Consensus 3 ~~~fPCQ~FS~aG-~rkd~~D~R~~L~~~~iriI~~~~p~---~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d 78 (164)
.-|||||+||.+| .+++.+|+|+.||.+++++|.+++|. ++|. +|+||||+||..+. ..
T Consensus 88 ~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~----------------~~l~ENV~gl~~~~-~~ 150 (295)
T 2qrv_A 88 IGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPF----------------FWLFENVVAMGVSD-KR 150 (295)
T ss_dssp EECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCC----------------EEEEEEESSBCHHH-HH
T ss_pred EecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCcc----------------EEEEEcCcchhhcC-cc
Confidence 4589999999999 78899999999999999999999974 3566 56999999998654 23
Q ss_pred HHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecc
Q psy3546 79 LITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKK 114 (164)
Q Consensus 79 ~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~r 114 (164)
.|.+.|+. .+.+|||.+|| ||.|+|++++.
T Consensus 151 ~~~~~l~~-----~~~vl~a~~~~-PQ~R~R~~i~~ 180 (295)
T 2qrv_A 151 DISRFLES-----NPVMIDAKEVS-AAHRARYFWGN 180 (295)
T ss_dssp HHHHHHTS-----CCCCEEGGGTS-SBCCEEEEEEC
T ss_pred HHHHHHhc-----CcEEeecceEC-CccCcEEEEEE
Confidence 46666653 46899999996 99996655554
No 13
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.74 E-value=1.3e-18 Score=145.00 Aligned_cols=81 Identities=7% Similarity=-0.041 Sum_probs=60.4
Q ss_pred cCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCC---CCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHH
Q psy3546 4 IDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPG---DRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLI 80 (164)
Q Consensus 4 ~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~---~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I 80 (164)
=|||||+||.+| +|++||.+|+|+|.+++|. .+|. +|+||||+||..+. .+.|
T Consensus 87 GG~PCQ~FS~ag-------~rg~Lf~ef~Riv~~~rPk~~~~~P~----------------~fv~ENV~gL~~~~-~~~i 142 (230)
T 2qrv_B 87 GATPPLGHTCDR-------PPSWYLFQFHRLLQYARPKPGSPRPF----------------FWMFVDNLVLNKED-LDVA 142 (230)
T ss_dssp EECCCTTTSSCS-------CTHHHHHHHHHHHHHHCCCSSCCSCC----------------EEEEEECSCSCHHH-HHHH
T ss_pred ECCCCCcccccC-------CCchHHHHHHHHHHHHCcCcccCCCc----------------EEEEeccHHhhhcc-HHHH
Confidence 389999999887 4899999999999999973 2455 66999999996543 3556
Q ss_pred HHHHHhCCCeEEEEEeCCCCCCCCCcceEEEec
Q psy3546 81 TSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNK 113 (164)
Q Consensus 81 ~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~ 113 (164)
...|+ +.+.||||.+|||||.|++|+..
T Consensus 143 ~~~l~-----~~~~vLnA~dfgvpQrRr~f~g~ 170 (230)
T 2qrv_B 143 SRFLE-----MEPVTIPDVHGGSLQNAVRVWSN 170 (230)
T ss_dssp HHHHT-----SCCEECCCCCSCC----CEEEEC
T ss_pred HHHHc-----CCcEEEEcccCCcCcccEEEEee
Confidence 55553 35678999999999999888743
No 14
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.73 E-value=1.8e-18 Score=153.20 Aligned_cols=81 Identities=6% Similarity=-0.056 Sum_probs=65.0
Q ss_pred cCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCC---CCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHH
Q psy3546 4 IDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPG---DRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLI 80 (164)
Q Consensus 4 ~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~---~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I 80 (164)
=|||||+||.+| +|++||++|+|+|.+++|. .+|. +|+||||+||. +.....|
T Consensus 243 GG~PCQ~FS~A~-------~Rg~Lf~ef~Riv~~~rPk~~~~~P~----------------~fv~ENV~gL~-~~~~~~i 298 (386)
T 2pv0_B 243 GATPPLGHTCDR-------PPSWYLFQFHRLLQYARPKPGSPGPF----------------FWMFVDNLVLN-KEDLDVA 298 (386)
T ss_dssp EECCCTTTCSCS-------CTHHHHHHHHHHHHHHSCCSSCCSCC----------------EEEEEECSCSC-HHHHHHH
T ss_pred ECCCCCcccccC-------CcchHHHHHHHHHHHhCCCcccCCCc----------------EEEEEechhhh-hcchHHH
Confidence 389999999884 6899999999999999983 3455 66999999994 3334456
Q ss_pred HHHHHhCCCeEEEEEeCCCCCCCCCcceEEEec
Q psy3546 81 TSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNK 113 (164)
Q Consensus 81 ~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~ 113 (164)
...|+ +.+.||||.+|||||.|++|+..
T Consensus 299 ~~~L~-----v~~~VLnA~dyGVPQrRrRf~g~ 326 (386)
T 2pv0_B 299 SRFLE-----MEPVTIPDVHGGSLQNAVRVWSN 326 (386)
T ss_dssp HHHTT-----SCCCEEECCCSSSCCCEEEEEEC
T ss_pred HHHHc-----CCeEEEEccccCccccccEEEEE
Confidence 55553 56789999999999999887744
No 15
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=85.67 E-value=0.42 Score=39.85 Aligned_cols=46 Identities=11% Similarity=-0.055 Sum_probs=31.6
Q ss_pred eEEEeecCcCCCC-ch-HHHHHHHHHHhCCCeEEEEEeCCCCCCCCCc
Q psy3546 61 GIFRTPNVKGFEG-SR-SRDLITSMLTRAGFRFQEFLLSPTQFGTSLY 106 (164)
Q Consensus 61 ~iFl~ENVkGf~~-s~-~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~ 106 (164)
++|++++.....- .. ..+.|.+.+..+||.+....+.-..+++||.
T Consensus 266 G~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~~e~~~p~~~~~q~ 313 (332)
T 2igt_A 266 ALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGELVIREAGLDGK 313 (332)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEEEEEEEECCCSSSC
T ss_pred cEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEEEEEecccCCcccc
Confidence 5557777665432 22 3444445677899999877777788899998
No 16
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=72.68 E-value=4.2 Score=32.95 Aligned_cols=40 Identities=18% Similarity=0.335 Sum_probs=31.6
Q ss_pred ccccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCC-CCC
Q psy3546 56 KRKLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPT-QFG 102 (164)
Q Consensus 56 ~~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnat-dfG 102 (164)
+++||.+ +||-|| .+..|+..|.+.||++....+.|+ ++|
T Consensus 29 ~~~LsVl--VeN~pG-----vLaRItglfsrRG~NI~SLtV~~ted~g 69 (193)
T 2fgc_A 29 EHLVSML--VHNKPG-----VMRKVANLFARRGFNISSITVGESETPG 69 (193)
T ss_dssp EEEEEEE--EECCTT-----HHHHHHHHHHTTTCEEEEEEEEECSSTT
T ss_pred EEEEEEE--ECCCCh-----HHHHHHHHHHHCCceEEEEEeeccCCCC
Confidence 5677754 999997 567999999999999988776654 445
No 17
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=61.15 E-value=5.3 Score=31.19 Aligned_cols=41 Identities=15% Similarity=0.297 Sum_probs=31.4
Q ss_pred ccccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCC-CCC
Q psy3546 56 KRKLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQ-FGT 103 (164)
Q Consensus 56 ~~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatd-fGV 103 (164)
+++||. ++||-|| .+..|+..|++.||++....+.|++ .|+
T Consensus 4 ~~~IsV--~veNrpG-----vL~rI~~lfs~rg~NI~Sl~v~~t~d~g~ 45 (165)
T 2pc6_A 4 RHIISL--LMENEAG-----ALSRVAGLFSARGYNIESLSVAPTEDPTL 45 (165)
T ss_dssp EEEEEE--EEECSTT-----HHHHHHHHHHHHTCCCCEEEEEECSSTTE
T ss_pred EEEEEE--EEeCCCc-----HHHHHHHHHHHCCCcEEEEEEEecCCCCE
Confidence 356664 5899997 4678999999999999887776654 553
No 18
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=58.43 E-value=11 Score=26.92 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=29.4
Q ss_pred ccccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeC-CCCCC
Q psy3546 56 KRKLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLS-PTQFG 102 (164)
Q Consensus 56 ~~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLn-atdfG 102 (164)
.++++. +++|-||. ...|...|.++|+.+.....+ ..+||
T Consensus 6 ~~~i~v--~v~d~~G~-----l~~i~~~la~~~inI~~i~~~~~~~~~ 46 (144)
T 2f06_A 6 AKQLSI--FLENKSGR-----LTEVTEVLAKENINLSALCIAENADFG 46 (144)
T ss_dssp EEEEEE--EECSSSSH-----HHHHHHHHHHTTCCEEEEEEEECSSCE
T ss_pred EEEEEE--EecCCCcH-----HHHHHHHHHHCCCCEEEEEEEecCCCC
Confidence 355665 48999873 467899999999999887665 34555
No 19
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=50.05 E-value=13 Score=28.88 Aligned_cols=39 Identities=21% Similarity=0.360 Sum_probs=29.8
Q ss_pred cccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCC-CC
Q psy3546 57 RKLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQ-FG 102 (164)
Q Consensus 57 ~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatd-fG 102 (164)
++||. +++|-+| .+..|+..|++.||++......+++ .|
T Consensus 4 ~~IsV--~v~NrpG-----vLarIt~lfs~rg~NI~Sl~v~~t~d~~ 43 (164)
T 2f1f_A 4 RILSV--LLENESG-----ALSRVIGLFSQRGYNIESLTVAPTDDPT 43 (164)
T ss_dssp EEEEE--EEECCTT-----HHHHHHHHHHTTTCCCSEEEEEECSCSS
T ss_pred EEEEE--EEeCCCc-----HHHHHHHHHHHCCCCeeeceeeecCCCC
Confidence 44553 5899997 4678999999999999887776654 44
No 20
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=48.24 E-value=59 Score=23.94 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEeccc
Q psy3546 75 RSRDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKK 115 (164)
Q Consensus 75 ~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rk 115 (164)
.+.+.+.+.|..+||.+.+....+........++++...++
T Consensus 185 ~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~ 225 (235)
T 3lcc_A 185 VDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKK 225 (235)
T ss_dssp CCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEE
T ss_pred CCHHHHHHHHHHcCCeEEEEEecCCccccccCHHHHhhhhh
Confidence 35689999999999999887777777655555666554443
No 21
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=47.57 E-value=31 Score=25.19 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCCC--CCcceEEEeccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPTQFGT--SLYTEWLRNKKK 115 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnatdfGV--PQ~Rr~~i~~rk 115 (164)
+.+.+.++|+++||.+....-+ .+... +...+++++++|
T Consensus 202 ~~~~l~~~l~~aGf~~~~~~~~-~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 202 PPEQYITWLREAGFRVCAVTGD-FKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp CHHHHHHHHHHTTEEEEEEEET-TSSSCCCTTCSEEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEecC-cccCCCCCCceEEEEEEEe
Confidence 5789999999999998665432 11111 233578888775
No 22
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=44.06 E-value=33 Score=28.47 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=28.0
Q ss_pred eEEEeecCcCCCCc-hHHHHHHHHHHhCCCeE--EEEEeCCCCCCCC
Q psy3546 61 GIFRTPNVKGFEGS-RSRDLITSMLTRAGFRF--QEFLLSPTQFGTS 104 (164)
Q Consensus 61 ~iFl~ENVkGf~~s-~~~d~I~s~L~~~GY~v--~~~lLnatdfGVP 104 (164)
+++++.+.++.... ...+.+.+.+..+|+.+ .+....|.||-++
T Consensus 333 G~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d~p~~ 379 (396)
T 3c0k_A 333 GILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVI 379 (396)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEEECCTTSCEE
T ss_pred cEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEECCCCCCCCCC
Confidence 56677766665443 34555666888888654 4556678888653
No 23
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=42.61 E-value=39 Score=24.55 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCC--CCCCCCcceEEEecccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPT--QFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnat--dfGVPQ~Rr~~i~~rkk 116 (164)
+.+.+.++|+++||.+....-+.. .++ +...++++++++.
T Consensus 204 ~~~~l~~ll~~aGf~~~~~~~~~~~~~~~-~~~~~~~~varK~ 245 (246)
T 1y8c_A 204 KEEDIEKYLKHGQLNILDKVDCYSNKKVE-KFTERITYLVKLG 245 (246)
T ss_dssp CHHHHHHHHHHTTEEEEEEEESSSSCBCC-TTCSEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCeEEEEEcccccCcCC-CCceeEEEEEEec
Confidence 578999999999999876643321 121 2335777777763
No 24
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=42.03 E-value=5.5 Score=32.70 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=20.9
Q ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCCCCCc
Q psy3546 77 RDLITSMLTRAGFRFQEFLLSPTQFGTSLY 106 (164)
Q Consensus 77 ~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~ 106 (164)
++.+-.+|..+||... .+|.+||.|..
T Consensus 291 ~~~~~~~l~~lGY~~~---~~~~~~~~p~~ 317 (337)
T 3ap1_A 291 MAQIAPMLAQLGYDPY---ANPPNYGNPDP 317 (337)
T ss_dssp HHHHCTHHHHTTCCTT---SSSCCCCCCCH
T ss_pred HHHHHHHHHHhCCCCC---CCCCCCCCccH
Confidence 4556677899999753 48999999974
No 25
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=41.57 E-value=54 Score=25.71 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=34.9
Q ss_pred EeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEe
Q psy3546 64 RTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRN 112 (164)
Q Consensus 64 l~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~ 112 (164)
+++ .|++.+-+++.+++.+.++|+.+.+..+++.+.-- +.|+.
T Consensus 174 ~TP--~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~----evflt 216 (246)
T 2zgi_A 174 YLL--EGGLEGITREKVAEAARGLGLRVERGLFRPEGLRG----HLLLA 216 (246)
T ss_dssp EEE--CSSCCCHHHHHHHHHHHHTTCEEEEECCCGGGCCS----EEEEE
T ss_pred ECC--CCccCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHh----hHeee
Confidence 566 67788889999999999999999999999988633 55553
No 26
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=41.03 E-value=46 Score=23.04 Aligned_cols=40 Identities=8% Similarity=-0.160 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCcc-eEEEecc
Q psy3546 75 RSRDLITSMLTRAGFRFQEFLLSPTQFGTSLYT-EWLRNKK 114 (164)
Q Consensus 75 ~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~R-r~~i~~r 114 (164)
...+.+...|.++||.+....-+......++.. ..+++++
T Consensus 153 ~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~ 193 (195)
T 3cgg_A 153 WVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFT 193 (195)
T ss_dssp CCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEE
T ss_pred cCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEe
Confidence 356789999999999987765443333333333 4444443
No 27
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=36.34 E-value=58 Score=24.12 Aligned_cols=39 Identities=8% Similarity=-0.092 Sum_probs=24.3
Q ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEecccc
Q psy3546 77 RDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRNKKKK 116 (164)
Q Consensus 77 ~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~~rkk 116 (164)
.+++. +|.++||.+....-+-..=-.|...|++++++++
T Consensus 212 ~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~ 250 (252)
T 1wzn_A 212 PREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAK 250 (252)
T ss_dssp HHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECC
T ss_pred HHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEee
Confidence 46665 8999999876543221111134557888888764
No 28
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=34.70 E-value=44 Score=28.34 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=35.1
Q ss_pred hhccccccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCC
Q psy3546 52 VKGWKRKLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTS 104 (164)
Q Consensus 52 ~~~~~~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVP 104 (164)
+..|....+.. +++-. |-++.....+|...-..++..|-...+||+|||.+
T Consensus 17 ~~~~~~g~~ig-~VPTM-GaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~ 67 (264)
T 3n8h_A 17 RNSLIKQQKIG-FVPTM-GALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNP 67 (264)
T ss_dssp HHTSCTTSCEE-EEEEC-SSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCH
T ss_pred HHHHhCCCcEE-EECCC-cchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCc
Confidence 44452223344 44433 44556677888888889999998999999999974
No 29
>1wn9_A The hypothetical protein (TT1805); thermus thermophillus, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus} SCOP: d.319.1.1 PDB: 1wna_A
Probab=34.64 E-value=24 Score=27.42 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=25.9
Q ss_pred CCchHHHHHHHHHHhCCCe-EEEEEeCCCCC
Q psy3546 72 EGSRSRDLITSMLTRAGFR-FQEFLLSPTQF 101 (164)
Q Consensus 72 ~~s~~~d~I~s~L~~~GY~-v~~~lLnatdf 101 (164)
.+.+...+++..|.+.|-+ +.+.||+|++|
T Consensus 69 ~G~~ALaELv~wl~~~G~~~f~EaVl~p~e~ 99 (131)
T 1wn9_A 69 GGEEALSELVGLLLAQGARRFYEAVVSPGEM 99 (131)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEEECGGGH
T ss_pred cHHHHHHHHHHHHHHcCCchhhhhccCHHHH
Confidence 3456788999999999987 99999999987
No 30
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=34.61 E-value=75 Score=23.46 Aligned_cols=41 Identities=10% Similarity=0.260 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCCCCC--c-ceEEEecccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPTQFGTSL--Y-TEWLRNKKKK 116 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ--~-Rr~~i~~rkk 116 (164)
..+.+.+.|.++||.+......+..|..+. + ..+++++++.
T Consensus 218 ~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 218 GWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 456899999999999977766665554443 2 3566666654
No 31
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=33.77 E-value=58 Score=23.21 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEe-CCCCCCCCCcceEEEeccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFLL-SPTQFGTSLYTEWLRNKKK 115 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lL-natdfGVPQ~Rr~~i~~rk 115 (164)
+.+.+.+.|+++||.+....- .+..-|.|. .+++++++
T Consensus 188 ~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~--~~~~va~k 226 (227)
T 3e8s_A 188 TLASWLNALDMAGLRLVSLQEPQHPQSAVPQ--SLLMVAER 226 (227)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCCCTTCSSCS--CEEEEEEE
T ss_pred cHHHHHHHHHHcCCeEEEEecCCCCCCCCce--eEEEEeec
Confidence 678999999999999876543 222223333 56776654
No 32
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=33.09 E-value=79 Score=26.10 Aligned_cols=58 Identities=16% Similarity=0.152 Sum_probs=38.9
Q ss_pred cCCCCCcccccCcCCCCCCccchHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHHHHH
Q psy3546 4 IDYASNSDPGTGLQKDIADARCTALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLITSM 83 (164)
Q Consensus 4 ~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I~s~ 83 (164)
.+|||++++..|. .|..++..+++.|.+... |. - ++| -|.-.+.+.-.+.+.
T Consensus 76 ~~~~~~~~tmv~~------~r~~~L~~l~~~v~~~~~---pg----------------~-IlE--iGv~~G~Sai~ma~~ 127 (282)
T 2wk1_A 76 RDWPANAHTMIGI------KRLENIRQCVEDVIGNNV---PG----------------D-LVE--TGVWRGGACILMRGI 127 (282)
T ss_dssp CSCBSSCSCSSHH------HHHHHHHHHHHHHHHTTC---CC----------------E-EEE--ECCTTSHHHHHHHHH
T ss_pred ccCCcccccccCH------HHHHHHHHHHHHHHhcCC---CC----------------c-EEE--eecCchHHHHHHHHH
Confidence 5789999988874 457788888887776552 55 2 466 365555555556667
Q ss_pred HHhCCC
Q psy3546 84 LTRAGF 89 (164)
Q Consensus 84 L~~~GY 89 (164)
|...|.
T Consensus 128 l~~~g~ 133 (282)
T 2wk1_A 128 LRAHDV 133 (282)
T ss_dssp HHHTTC
T ss_pred hHhcCC
Confidence 776654
No 33
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=29.59 E-value=47 Score=21.17 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=19.6
Q ss_pred EeecCcCCCCchHHHHHHHHHHhCCCeEE
Q psy3546 64 RTPNVKGFEGSRSRDLITSMLTRAGFRFQ 92 (164)
Q Consensus 64 l~ENVkGf~~s~~~d~I~s~L~~~GY~v~ 92 (164)
.|+||.|+ +.++..+.|+.+||.+.
T Consensus 9 ~VPdv~G~----~~~~A~~~L~~~Gl~~~ 33 (71)
T 3ouv_A 9 DIPDVAGQ----TVDVAQKNMNVYGFTKF 33 (71)
T ss_dssp ECCCCTTC----BHHHHHHHHHHTTCCCE
T ss_pred ECCCcCCC----CHHHHHHHHHHCCCeEE
Confidence 78999875 35667788999999764
No 34
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=28.59 E-value=62 Score=28.69 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=28.0
Q ss_pred CCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCC
Q psy3546 70 GFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGT 103 (164)
Q Consensus 70 Gf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGV 103 (164)
|-..+.....+.+++..+||.+.|.++||++|-.
T Consensus 83 GsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~ 116 (348)
T 1vpt_A 83 GSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP 116 (348)
T ss_dssp SCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG
T ss_pred CcCCcchHHHHHHHhhhcCCceEEEEECCCchhh
Confidence 4334567788889999999999999999999843
No 35
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=28.37 E-value=58 Score=24.46 Aligned_cols=19 Identities=21% Similarity=0.349 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhCCCeEEEE
Q psy3546 76 SRDLITSMLTRAGFRFQEF 94 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~ 94 (164)
+.+++.++|+++||.+...
T Consensus 216 t~~el~~ll~~aGF~v~~~ 234 (263)
T 3pfg_A 216 TREQYERAFTAAGLSVEFM 234 (263)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred cHHHHHHHHHHCCCEEEEe
Confidence 4789999999999988765
No 36
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=27.75 E-value=54 Score=25.22 Aligned_cols=40 Identities=15% Similarity=0.346 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCeEEEEE--eCCCCCCCCC--cceEEEeccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFL--LSPTQFGTSL--YTEWLRNKKK 115 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~l--LnatdfGVPQ--~Rr~~i~~rk 115 (164)
+.+.+.+.|.++||.+.... -.|..|..+. +.++|.+..+
T Consensus 235 ~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (289)
T 2g72_A 235 SEEEVREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQ 278 (289)
T ss_dssp CHHHHHHHHHHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEEEE
T ss_pred CHHHHHHHHHHcCCeEEEeeEeeccccccccccCcceEEEEEEe
Confidence 46889999999999875543 2235565543 3444444443
No 37
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=26.61 E-value=62 Score=28.05 Aligned_cols=53 Identities=13% Similarity=0.210 Sum_probs=34.5
Q ss_pred hhccccc-cceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCc
Q psy3546 52 VKGWKRK-LSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTSLY 106 (164)
Q Consensus 52 ~~~~~~~-~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~ 106 (164)
+..|++. .+.. +++-. |-.+......|-..-..+...|-...+||+|||-+..
T Consensus 35 ~~~~r~~g~~Ig-fVPTM-G~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~ED 88 (314)
T 3inn_A 35 LAPARQQGKKIG-FVPTM-GYLHKGHLELVRRARVENDVTLVSIFVNPLQFGANED 88 (314)
T ss_dssp HHHHHHTTCCEE-EEEEC-SSCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSS
T ss_pred HHHHHHcCCeEE-EEcCC-CccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCcc
Confidence 4445443 2344 33322 3345556677777777888888888999999998754
No 38
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=26.36 E-value=41 Score=24.48 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCCeEEEE
Q psy3546 76 SRDLITSMLTRAGFRFQEF 94 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~ 94 (164)
+.+.+.++|+++||.+...
T Consensus 206 t~~~~~~ll~~aGF~v~~~ 224 (239)
T 3bxo_A 206 HQAEYEAAFTAAGLRVEYL 224 (239)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEe
Confidence 4689999999999977654
No 39
>3zth_A STU0660; DNA binding, crispr, CAS; 2.40A {Streptococcus thermophilus}
Probab=23.50 E-value=71 Score=28.34 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=43.4
Q ss_pred hHHHHHHHhccccCCCCCCCchhhhhhhccccccceEEEeecCcCCCCchHHHHHHHHHHhC--CCeEEEEEeCCCCCC
Q psy3546 26 TALSYLIETIPANFPGDRLDHYTTQAVKGWKRKLSGIFRTPNVKGFEGSRSRDLITSMLTRA--GFRFQEFLLSPTQFG 102 (164)
Q Consensus 26 ~L~~~~iriI~~~~p~~~P~~~~~~~~~~~~~~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~--GY~v~~~lLnatdfG 102 (164)
.++..|+++|..+...+.-. +.++++|.-.|.+-.++..|.+.++.+ -|.--++++.|++=|
T Consensus 179 ekl~~fL~mL~~~ls~~t~k---------------~LLV~kNiD~~Ls~~sy~~i~~~~~~ls~k~~nl~fi~fpS~eg 242 (350)
T 3zth_A 179 DKLSLFLEMLDHLLSQTTEK---------------YLIVLKNIDGFISEESYTIFYRQICHLVKKYPNLTFILFPSDQG 242 (350)
T ss_dssp HHHHHHHHHHHHHHTTCCSC---------------EEEEEESCGGGSCHHHHHHHHHHHHHHHHHCTTEEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHhcCCCc---------------EEEEEeCHHHhhcHHHHHHHHHHHHHHHhhCCCeEEEEEecCCC
Confidence 57777888777765321112 345999999999888888887777654 355456788888766
No 40
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=23.31 E-value=59 Score=27.75 Aligned_cols=52 Identities=19% Similarity=0.365 Sum_probs=34.3
Q ss_pred hhhccccc-cceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCC
Q psy3546 51 AVKGWKRK-LSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTS 104 (164)
Q Consensus 51 ~~~~~~~~-~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVP 104 (164)
.+..|++. .+..| ++=. |.++......|...-..++..|-...+||+|||.+
T Consensus 16 ~~~~~r~~g~~Igf-VPTM-G~LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~ 68 (287)
T 3q12_A 16 QIRRWRQEGKRIAL-VPTM-GNLHEGHMTLVDEAKTRADVVVVTIFVNPLQFERP 68 (287)
T ss_dssp HHHHHHHTTCCEEE-EEEC-SSCCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSH
T ss_pred HHHHHHHcCCeEEE-EcCC-CcccHHHHHHHHHHHHhCCEEEEEeccCcccCCCc
Confidence 34455543 24453 2222 44566667788777777888888888999999974
No 41
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=23.09 E-value=41 Score=24.63 Aligned_cols=28 Identities=25% Similarity=0.269 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCCC
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPTQFGT 103 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnatdfGV 103 (164)
+.+.+.+.|+++||...........||+
T Consensus 193 ~~~~~~~ll~~aGF~~v~~~~~~~~~~~ 220 (234)
T 3dtn_A 193 EMNQQLNWLKEAGFRDVSCIYKYYQFAV 220 (234)
T ss_dssp BHHHHHHHHHHTTCEEEEEEEEETTEEE
T ss_pred CHHHHHHHHHHcCCCceeeeeeecceeE
Confidence 4577888999999998877777766664
No 42
>2nrk_A Hypothetical protein GRPB; UPF0157, PFAM04229, glutamate-rich protein, enterococcus FAE PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis} SCOP: d.218.1.14
Probab=22.69 E-value=46 Score=25.61 Aligned_cols=55 Identities=20% Similarity=0.385 Sum_probs=30.6
Q ss_pred Cchhhhhhhcccc--ccceEEEeecCcCCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCCCcceEEEe
Q psy3546 45 DHYTTQAVKGWKR--KLSGIFRTPNVKGFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTSLYTEWLRN 112 (164)
Q Consensus 45 ~~~~~~~~~~~~~--~~~~iFl~ENVkGf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ~Rr~~i~ 112 (164)
.|.-..||.|--- -++..+.++|.. ..+.+...|..+||.... +.|+|. |++|..
T Consensus 38 ~HIGSTsVpGl~AKPIIDI~v~V~~~~------~~~~~~~~L~~~Gy~~~~------e~~~~~-r~~f~k 94 (173)
T 2nrk_A 38 EHIGSTSVPNLAAKPIIDFLVIVEEIE------KVDLLQWEFERIGYEYMG------EFGLSG-RRYLRK 94 (173)
T ss_dssp EEESGGGSTTCCBCSCEEEEEEESCSG------GGGGGHHHHHHTTCEECT------TTTSTT-EEEEEE
T ss_pred EEECCCCCCCCCcCCeeEEEeccCCHH------HHHHHHHHHHHCCCEECC------CCCCCc-cEEEEc
Confidence 4555556666432 234333333332 345677889999997632 346665 555544
No 43
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=22.51 E-value=97 Score=26.92 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=28.9
Q ss_pred CCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCC
Q psy3546 70 GFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFG 102 (164)
Q Consensus 70 Gf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfG 102 (164)
|-..+.....+.+.+..+|+++.|.++||+.+.
T Consensus 68 GSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~ 100 (307)
T 3mag_A 68 GSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHD 100 (307)
T ss_dssp SCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCC
T ss_pred cccCccHHHHHHHhchhhCCCeEEEEEcCCcch
Confidence 655667888999999999999999999999984
No 44
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=22.20 E-value=1.2e+02 Score=23.24 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCCCCC--c-ceEEEecccc
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPTQFGTSL--Y-TEWLRNKKKK 116 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ--~-Rr~~i~~rkk 116 (164)
+.+.+.+.|.++||.+.....-+..+..+. + .-++++++|.
T Consensus 217 ~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 217 EKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp CHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 467899999999999866543233343322 2 3567777664
No 45
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=21.97 E-value=60 Score=27.73 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=26.6
Q ss_pred CCCCchHHHHHHHHHHhCCCeEEEEEeCCCCCCCCC
Q psy3546 70 GFEGSRSRDLITSMLTRAGFRFQEFLLSPTQFGTSL 105 (164)
Q Consensus 70 Gf~~s~~~d~I~s~L~~~GY~v~~~lLnatdfGVPQ 105 (164)
|-++.....+|...-. ++..|-...+||+|||.+-
T Consensus 34 GaLH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~E 68 (285)
T 3mxt_A 34 GFLHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNE 68 (285)
T ss_dssp SSCCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTS
T ss_pred CcccHHHHHHHHHHHh-CCEEEEEeccCccccCCch
Confidence 4455566677777777 8888888889999999753
No 46
>3vhj_A BFPC; type IV pilus biogenesis, BFPD, membrane, membrane protein; 1.90A {Escherichia coli}
Probab=21.78 E-value=25 Score=28.31 Aligned_cols=43 Identities=28% Similarity=0.276 Sum_probs=28.4
Q ss_pred HHHHHHHHH---HhCCCeEEEEEeCCCCCCCCCcc---eEEEecccchhH
Q psy3546 76 SRDLITSML---TRAGFRFQEFLLSPTQFGTSLYT---EWLRNKKKKRKE 119 (164)
Q Consensus 76 ~~d~I~s~L---~~~GY~v~~~lLnatdfGVPQ~R---r~~i~~rkk~~e 119 (164)
+.+++.+.| ...|+. ...+++|.+||++..+ +.....+++=+|
T Consensus 115 s~~ear~~f~~~~s~~~~-~d~i~~P~ef~~g~s~~~~~~~~~~~~~~~~ 163 (172)
T 3vhj_A 115 SKDDAKKFFFDHVAYGYP-WDRTYSPSDVGVGESRSISELSLIKGKKLKE 163 (172)
T ss_dssp CHHHHHHHHHHHTTTTSC-CSEEECCTTTCSSBCCCGGGSCBCCCCBCEE
T ss_pred CHHHHHHHHHHHHHhcCc-cCcEECchhhCCCcceEhhHhhhhcceeecc
Confidence 456777776 233433 4579999999999997 445555555444
No 47
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=20.94 E-value=2.1e+02 Score=20.54 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhCCCeEEEEEeC
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLS 97 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLn 97 (164)
+.+.+.+.|.++||.+......
T Consensus 158 ~~~~~~~~l~~~Gf~~~~~~~~ 179 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVSKDLT 179 (215)
T ss_dssp CHHHHHHHHHHTTEEEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEecC
Confidence 5678999999999998765443
No 48
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=20.53 E-value=62 Score=26.10 Aligned_cols=37 Identities=14% Similarity=0.071 Sum_probs=23.1
Q ss_pred CCCcCCCCCcccccCcCCCCCCccchHHHHHHHhccccC
Q psy3546 1 MASIDYASNSDPGTGLQKDIADARCTALSYLIETIPANF 39 (164)
Q Consensus 1 ~~~~~fPCQ~FS~aG~rkd~~D~R~~L~~~~iriI~~~~ 39 (164)
+.||+|||-+.-..|.. .++.-..++..+.+++....
T Consensus 149 i~SIAfPaIsTG~~G~P--~~~aA~i~~~~v~~fl~~~~ 185 (221)
T 3q71_A 149 LKSIAFPAIGTGNLGFP--KNIFAELIISEVFKFSSKNQ 185 (221)
T ss_dssp CCEEEEECTTSSTTCCC--HHHHHHHHHHHHHHHHHHCC
T ss_pred CceEeeccccCCCCCCC--HHHHHHHHHHHHHHHHHHcC
Confidence 46899999987666643 23333446666666666553
No 49
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=20.49 E-value=2.3e+02 Score=21.80 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=25.5
Q ss_pred ceEEEeecCcCCCCc--hHHHHHHHHHHhCCCeEEEEEeCCCC
Q psy3546 60 SGIFRTPNVKGFEGS--RSRDLITSMLTRAGFRFQEFLLSPTQ 100 (164)
Q Consensus 60 ~~iFl~ENVkGf~~s--~~~d~I~s~L~~~GY~v~~~lLnatd 100 (164)
..+|+..+.+...++ .....+...|.+.||.|.....+...
T Consensus 22 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 22 RIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp EEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred eEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 345455444333233 35678889999999998766555443
No 50
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=20.38 E-value=1.7e+02 Score=22.90 Aligned_cols=19 Identities=32% Similarity=0.560 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCCeEEEE
Q psy3546 76 SRDLITSMLTRAGFRFQEF 94 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~ 94 (164)
..+.+...|+.+||.|...
T Consensus 70 D~~~L~~~F~~LGF~V~~~ 88 (179)
T 3p45_A 70 DRDNLTRRFSDLGFEVKCF 88 (179)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 4688999999999998654
No 51
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=20.36 E-value=1.1e+02 Score=23.05 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=26.2
Q ss_pred CcCCCCc-hHHHHHHHHHHhCCCeEEEEEeCCCCCCCC
Q psy3546 68 VKGFEGS-RSRDLITSMLTRAGFRFQEFLLSPTQFGTS 104 (164)
Q Consensus 68 VkGf~~s-~~~d~I~s~L~~~GY~v~~~lLnatdfGVP 104 (164)
|-||.++ ..+..+...|.+.||+| ..+|-.-||-+
T Consensus 57 lHG~~~s~~~~~~la~~La~~Gy~V--ia~Dl~GhG~S 92 (281)
T 4fbl_A 57 SHGFTGSPQSMRFLAEGFARAGYTV--ATPRLTGHGTT 92 (281)
T ss_dssp ECCTTCCGGGGHHHHHHHHHTTCEE--EECCCTTSSSC
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCEE--EEECCCCCCCC
Confidence 5788654 56788999999999987 45566667754
No 52
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=20.10 E-value=32 Score=24.52 Aligned_cols=27 Identities=11% Similarity=0.190 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCC
Q psy3546 76 SRDLITSMLTRAGFRFQEFLLSPTQFG 102 (164)
Q Consensus 76 ~~d~I~s~L~~~GY~v~~~lLnatdfG 102 (164)
.++.++..|..+||+-...+..|-+|-
T Consensus 24 ~~~~l~~~L~~~GY~r~~~v~~~Gef~ 50 (106)
T 3fpn_B 24 ERNALLRRLVDIQYDRNDIDFRRGTFR 50 (106)
T ss_dssp CHHHHHHHHHHTTCEECTTCCCTTEEE
T ss_pred CHHHHHHHHHHcCCEECCccCCcEEEE
Confidence 578999999999998766665555553
Done!