BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3549
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RBL6|GOSR1_PONAB Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2
SV=1
Length = 248
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 97/147 (65%), Gaps = 14/147 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTG-AH-----GLRSSESDTEPLL---SADHMIESTAS 120
LRKQAR+LEN++D+KL SKL T +H G R S SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDS-SDTTPLLNGSSQDRMFETMAI 70
Query: 121 EIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHSR 177
EIE LL +L+ NDKM++ G +AA +HTLQRH++IL+DY E KT +N S
Sbjct: 71 EIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMSI 130
Query: 178 KEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 131 RERENLMGSVRKDIESYK-SGSGVNNR 156
>sp|O08522|GOSR1_CRIGR Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1
PE=1 SV=1
Length = 250
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 95/148 (64%), Gaps = 14/148 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTG-AH------GLRSSESDTEPLL---SADHMIESTA 119
LRKQAR+LEN++D+KL SKL T +H G SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMA 71
Query: 120 SEIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHS 176
EIE LL +L+ NDKM++ G +AA +HTLQRH++IL+DY E KT +N +
Sbjct: 72 IEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMA 131
Query: 177 RKEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 132 IRERENLMGSVRKDIESYK-SGSGVNNR 158
>sp|O88630|GOSR1_MOUSE Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1
SV=2
Length = 250
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 14/148 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKL-------GTGAHGLRSSESDTEPLL---SADHMIESTA 119
LRKQAR+LEN++D+KL SKL G+ G SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFETMA 71
Query: 120 SEIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHS 176
EIE LL +L+ NDKM++ G +AA +HTLQRH++IL+DY E KT +N +
Sbjct: 72 IEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFTA 131
Query: 177 RKEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 132 IRERENLMGSVRKDIESYK-SGSGVNNR 158
>sp|Q62931|GOSR1_RAT Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1
PE=1 SV=1
Length = 250
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 95/148 (64%), Gaps = 14/148 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTG-AH------GLRSSESDTEPLL---SADHMIESTA 119
LRKQAR+LEN++D+KL SKL T +H G SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMA 71
Query: 120 SEIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHS 176
EIE LL +L+ NDKM++ G +AA +HTLQRH++IL+DY E KT +N +
Sbjct: 72 IEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMA 131
Query: 177 RKEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 132 IRERENLMGSVRKDIESYK-SGSGVNNR 158
>sp|Q2TBU3|GOSR1_BOVIN Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2
SV=1
Length = 250
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 97/148 (65%), Gaps = 14/148 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTG-AH-----GLR-SSESDTEPLL---SADHMIESTA 119
LRKQAR+LEN++D+KL SKL T +H G R SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFETMA 71
Query: 120 SEIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHS 176
EIE LL +L+ NDKM++ + G +AA +HTLQRH++IL+DY E KT +N +
Sbjct: 72 IEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVA 131
Query: 177 RKEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 132 IRERENLMGSVRKDIESYK-SGSGVNNR 158
>sp|O95249|GOSR1_HUMAN Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1
SV=1
Length = 250
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 96/148 (64%), Gaps = 14/148 (9%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTG-AH-----GLR-SSESDTEPLL---SADHMIESTA 119
LRKQAR+LEN++D+KL SKL T +H G R SDT PLL S D M E+ A
Sbjct: 12 LRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETMA 71
Query: 120 SEIETLLTKLSNTNDKMSDIMAEGGK---DAAAIHTLQRHKEILEDYKKELSKTMSNIHS 176
EIE LL +L+ NDKM++ G +AA +HTLQRH++IL+DY E KT +N +
Sbjct: 72 IEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMA 131
Query: 177 RKEREQLLHSVRKDIDSYKNSASGLNRR 204
+ERE L+ SVRKDI+SYK S SG+N R
Sbjct: 132 IRERENLMGSVRKDIESYK-SGSGVNNR 158
>sp|Q9VE50|GOSR1_DROME Golgi SNAP receptor complex member 1 OS=Drosophila melanogaster
GN=Gos28 PE=2 SV=1
Length = 232
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
Query: 70 LRKQARKLENDIDVKLTCLSKLGTGAHGLRSSES---DTEPLLSADHMIESTASEIETLL 126
LRKQAR LEN+ID+KL SK+G G+ G S DT PLL +H+ +S + EIE +L
Sbjct: 9 LRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPLL-GEHVFDSLSEEIEQML 67
Query: 127 TKLSNTNDKMSDIMAEGGKDAAAIHTLQRHKEILEDYKKELSKTMSNIHSRKEREQLLHS 186
KLS+ N+ MSD+ A G AAA+HTLQRH+EIL+ Y++E +K +N R ERE+LL
Sbjct: 68 EKLSSLNESMSDLPASG---AAAMHTLQRHREILQGYRQEFNKICANHTMRIEREELLRG 124
Query: 187 VRKDIDSYKNSASGLNRR 204
S S SGLNRR
Sbjct: 125 SGLATSSGSPSISGLNRR 142
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 3 SWEDLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSES---DTEPLLSADHMIESTASEI 59
S++ LRKQAR LEN+ID+KL SK+G G+ G S DT PLL +H+ +S + EI
Sbjct: 5 SYDVLRKQARSLENEIDLKLVAFSKIGAGSGGGGSGGLGGVDTSPLL-GEHVFDSLSEEI 63
Query: 60 ETLLTKV 66
E +L K+
Sbjct: 64 EQMLEKL 70
>sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana
GN=GOS12 PE=1 SV=2
Length = 257
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 28/160 (17%)
Query: 63 LTKVGWS-LRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTE--------------- 106
L + GW LR++ARK+E D+DVKL+ +KLG R ++ DT+
Sbjct: 8 LQESGWEELRREARKIEGDLDVKLSSYAKLGA-----RFTQGDTDLVMNYEKVLKCVLVS 62
Query: 107 -------PLLSADHMIESTASEIETLLTKLSNTNDKMSDIMAEGGKDAAAIHTLQRHKEI 159
P + + +S EI++LL KL + ND MS A + L RH++I
Sbjct: 63 GYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDI 122
Query: 160 LEDYKKELSKTMSNIHSRKEREQLLHSVRKDIDSYKNSAS 199
L +Y +E + NI+S +E +LL SVR DI YK S S
Sbjct: 123 LHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKASGS 162
>sp|A8XLW0|GOSR1_CAEBR Golgi SNAP receptor complex member 1 OS=Caenorhabditis briggsae
GN=gos-28 PE=3 SV=1
Length = 234
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 68 W-SLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTEPLLSADHMIESTASEIETLL 126
W +LRK+AR EN IDVKL L+KL +HG + D + + S + +EIE L+
Sbjct: 5 WEALRKKARSTENSIDVKLVSLNKLTASSHG--GFDIDEKTVSSRQTTFRTVTTEIEGLI 62
Query: 127 TKLSNTNDKMSDIM-----AEGGKDAAAIHTLQRHKEILEDYKKELSKTMSNIHSRKERE 181
+L+N ND M+D+ A + A HTL+RH+EIL DY E + N+ +RE
Sbjct: 63 EQLTNINDDMNDVAGAQSSASWASNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRE 122
Query: 182 QLLHS 186
LL S
Sbjct: 123 LLLSS 127
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 3 SWEDLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTEPLLSADHMIESTASEIETL 62
+WE LRK+AR EN IDVKL L+KL +HG + D + + S + +EIE L
Sbjct: 4 TWEALRKKARSTENSIDVKLVSLNKLTASSHG--GFDIDEKTVSSRQTTFRTVTTEIEGL 61
Query: 63 LTKV 66
+ ++
Sbjct: 62 IEQL 65
>sp|Q95ZW1|GOSR1_CAEEL Golgi SNAP receptor complex member 1 OS=Caenorhabditis elegans
GN=gos-28 PE=2 SV=1
Length = 234
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 68 W-SLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTEPLLSADHMIESTASEIETLL 126
W +LRK+AR EN IDVKL L+KL +HG + D + + S ++ +EIE L+
Sbjct: 5 WEALRKKARSTENSIDVKLVSLNKLTASSHG--GFDIDEKTVSSRQTSFKTVTTEIEGLI 62
Query: 127 TKLSNTNDKMSDIM-----AEGGKDAAAIHTLQRHKEILEDYKKELSKTMSNIHSRKERE 181
+L+N ND M+D+ A + A HTL+RH+EIL DY E + N+ +RE
Sbjct: 63 EQLTNINDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRE 122
Query: 182 QLLHS 186
LL S
Sbjct: 123 LLLSS 127
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 3 SWEDLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTEPLLSADHMIESTASEIETL 62
+WE LRK+AR EN IDVKL L+KL +HG + D + + S ++ +EIE L
Sbjct: 4 TWEALRKKARSTENSIDVKLVSLNKLTASSHG--GFDIDEKTVSSRQTSFKTVTTEIEGL 61
Query: 63 LTKV 66
+ ++
Sbjct: 62 IEQL 65
>sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana
GN=GOS11 PE=2 SV=1
Length = 223
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 68 W-SLRKQARKLENDIDVKLTCLSKLGTGAHGLRSSESDTEPLLSADHMIESTASEIETLL 126
W +LRKQARK+E +D ++ +L + T+ L +D + I+ LL
Sbjct: 7 WDALRKQARKIEAQLDEQMHSYRRLVS-----------TKALSKSDGNESDLEAGIDLLL 55
Query: 127 TKLSNTNDKMSDIMAEGGKDAAAIHTLQRHKEILEDYKKELSKTMSNIHSRKEREQLLHS 186
+L N +M ++ GG + + HTL RH+EIL+D +E + S++ +++E LL
Sbjct: 56 RQLQQVNAQMQAWVSSGGSEMVS-HTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLED 114
Query: 187 VRK 189
R+
Sbjct: 115 FRE 117
>sp|P38736|GOSR1_YEAST Golgi SNAP receptor complex member 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GOS1 PE=1 SV=1
Length = 223
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 100 SSESDTEPLLSADHMIESTAS------------EIETLLTKLSNTNDKMSDIM-AEGGKD 146
S E+ TE LLS T S ++E +L + + D ++ I +
Sbjct: 16 SLETQTESLLSKYSTFAQTTSSEQTGQEKKIDKQLEGILGQRQDVIDSLTQICDSNPAIS 75
Query: 147 AAAIHTLQRHKEILEDYKKELSKTMSNIHSRKEREQLLHSVRKDI 191
A+ + L RHKEIL+D+ K S+I + R LL SV+ DI
Sbjct: 76 ASKLSQLHRHKEILQDHWKSFRNIRSSIQQERNRLNLLFSVKNDI 120
>sp|P02565|MYH3_CHICK Myosin-3 OS=Gallus gallus GN=MYH3 PE=2 SV=3
Length = 1940
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 99 RSSESDTEPLLSADHMIESTASEIETLLTKLSNTNDKMSDI---MAEGGKDAAAIHTLQR 155
+ S S + L + E + +ETL + N ++SD+ +AEGGK AIH L++
Sbjct: 1477 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGK---AIHELEK 1533
Query: 156 HKEILEDYKKELSKTMSNIHSRKERE-------QL-LHSVRKDID 192
K+ +E K EL + + E E QL L+ V+ DID
Sbjct: 1534 VKKQIEQEKSELQTALEEAEASLEHEEGKILRVQLELNQVKSDID 1578
>sp|P0C8G3|UBC_ASFK5 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1
Length = 218
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 114 MIESTASEIET-LLTKLSNTNDKMSDIMAEGGKDAAAIHTLQRHKEILEDYKKELSKTMS 172
M S A +IET LL+ +S N+ +D + DAA + HKE LE Y E+ KT+
Sbjct: 99 MTWSPAQKIETVLLSVISLFNEPNTD--SPANVDAAKSYRKLMHKEDLESYPMEVKKTV- 155
Query: 173 NIHSRKEREQLLHSVRKDIDSYKNSASGL 201
++ L +DI+ +KN+ +
Sbjct: 156 -------KKSLDECSAEDIEYFKNAVFNV 177
>sp|Q80WE4|KI20B_MOUSE Kinesin-like protein KIF20B OS=Mus musculus GN=Kif20b PE=1 SV=3
Length = 1774
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 113 HMIESTASEIETLLTKLSNTNDKMSDIMAEGGKDAAAIHTLQRHKEILEDYKKELS-KTM 171
H I+ +IE L ++ ++ SD+ A+ + H L+ + +++ ++EL K++
Sbjct: 1028 HQIQGLEEQIEKLQVEVKGYREENSDLRAQESQGKNRDHQLKEKESLIQQLREELQEKSV 1087
Query: 172 S---NIHSRKEREQLLHSVRKDIDSYK 195
S + EREQ L + +D+ YK
Sbjct: 1088 SLRVQVQLVAEREQALSELSQDVTCYK 1114
>sp|Q2KN95|CYTSA_TETNG Cytospin-A OS=Tetraodon nigroviridis GN=specc1l PE=2 SV=1
Length = 1113
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 114 MIESTASEIETLLTKLSNTNDKMSDIMAEGGKDAAAIH-TLQRHKEILEDYKKELSKTMS 172
M E +E + ++ L N +M IM + AA+ TL+ +KE+ + ELS+ +
Sbjct: 506 MAEQDNAEAQEMIGALKERNHQMERIMESERQGRAAVEATLEEYKEVASSDQAELSRCRA 565
Query: 173 NIHSRKEREQLLHSV 187
+ ++R L+S+
Sbjct: 566 QLEQERQRVAELYSL 580
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.125 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,623,984
Number of Sequences: 539616
Number of extensions: 2582313
Number of successful extensions: 10540
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 10164
Number of HSP's gapped (non-prelim): 587
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)