Diaphorina citri psyllid: psy3552


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
MVDLTGTSDQVRLTVCVLIRYQVDLTRCTCQVYLIAKIFLENIEGRLQGKVRSGGQNTTIPLSVEGQTKKLIEEATSLDNLCQMYHGWAAYQ
ccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccHHHHHHcccccccc
*********QVRLTVCVLIRYQVDLTRCTCQVYLIAKIFLENIEGRLQGKVRS*GQ**TIPLSVEGQTKKLIEEATSLDNLCQMYHGWAAYQ
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MVDLTGTSDQVRLTVCVLIRYQVDLTRCTCQVYLIAKIFLENIEGRLQGKVRSGGQNTTIPLSVEGQTKKLIEEATSLDNLCQMYHGWAAYQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine/threonine-protein kinase ATR Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates various proteins, which collectively inhibits DNA replication and mitosis and promotes DNA repair and recombination. Phosphorylates grp/CHK1. Phosphorylates 'Ser-137' of histone variant H2AX/H2AV at sites of DNA damage, thereby regulating DNA damage response mechanism. Essential for the DNA damage checkpoint in larval imaginal disks and neuroblasts and for the DNA replication checkpoint in the embryo. Has also an essential role during early nuclear divisions in embryos, where it is required to delay mitosis in response to incomplete DNA replication. Also plays an important role during meiosis, where it may monitor double-strand-break repair during meiotic crossing over, to regulate the progression of prophase I, and to enforce metaphase I delay observed at the end of oogenesis.confidentQ9VXG8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000706 [BP]meiotic DNA double-strand break processingprobableGO:0048610, GO:0090304, GO:0090305, GO:0034641, GO:0006807, GO:0022402, GO:0044699, GO:1901361, GO:0006139, GO:0051716, GO:0044265, GO:0051321, GO:0000003, GO:0044260, GO:0009056, GO:0000729, GO:0006308, GO:0071704, GO:0007049, GO:0046483, GO:0006281, GO:0009987, GO:0006725, GO:1901575, GO:0046700, GO:0006974, GO:0019439, GO:0006950, GO:0044763, GO:0008152, GO:0034655, GO:0044238, GO:0009057, GO:0006302, GO:0044248, GO:0000738, GO:0044270, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150, GO:1901360
GO:0065007 [BP]biological regulationprobableGO:0008150
GO:0004672 [MF]protein kinase activityprobableGO:0016773, GO:0016772, GO:0016301, GO:0003824, GO:0016740, GO:0003674

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W1N, chain A
Confidence level:confident
Coverage over the Query: 61-92
View the alignment between query and template
View the model in PyMOL