BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3554
(672 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24509|STX5_DROME Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2
Length = 467
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/296 (58%), Positives = 219/296 (73%), Gaps = 27/296 (9%)
Query: 63 RERTLEFNNVIRSLQGKNIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLEK 122
R+RT EF N IRSLQ +NI RAV +D R+A+ VQ+Y EFM++A+ IGKNI+STYAKLEK
Sbjct: 161 RDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAKLEK 220
Query: 123 LTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLSH 182
LT+LAK+KSLF+D+P EIQELTYIIK DLN+LNQQIA+LQ + K QR + +HL+SH
Sbjct: 221 LTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRR--HTNGKHLVSH 278
Query: 183 SSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSGPHHQ 242
SS++VLALQSKLASMST+FK +LEVRTENLKQ K+RRDQ+S G P + + S Q
Sbjct: 279 SSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFSQGPGPLAAHTVSPS-TAKQ 337
Query: 243 GSVLLADEQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTA--LQQQQQQKTMMLYEDQSE 300
GS+LL++E A+ + D SDT L Q Q M +Y+D S+
Sbjct: 338 GSLLLSEENQAVSI------------------DMGSSDTTPLLSTQTQ---MAIYDD-SD 375
Query: 301 QFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAH 356
++Q RA+TMQNIESTIVELGGIFQQLAHMV+EQEE+VERID N+ D EL++E+AH
Sbjct: 376 NYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAH 431
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 396 KYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKI 440
K + E ID N+ D EL++E+AH EILKYFQSV+ NRWLMIKI
Sbjct: 407 KEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRWLMIKI 451
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 201/302 (66%), Gaps = 48/302 (15%)
Query: 63 RERTLEFNNVIRSLQGK-NIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLE 121
R+RT EF + +SLQ + N ++A K RA V+ EF L+AK IGK++S+T+AKLE
Sbjct: 58 RDRTQEFLSACKSLQSRQNGIQA--NKPALRA--VRQRSEFTLMAKRIGKDLSNTFAKLE 113
Query: 122 KLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLS 181
KLT+LAKRKSLF+DK EI+ELTYIIK+D+NSLN+QIA+LQ + + S +HL +
Sbjct: 114 KLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKG---SQSGRHLQT 170
Query: 182 HSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSGPHH 241
HS+++V++LQSKLASMS +FK+VLEVRTENLKQ +SRR+Q+S AP S P A P+H
Sbjct: 171 HSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS--RAPVSALPLA---PNH 225
Query: 242 --QGSVLLADE-----QCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMML 294
G+V+L E AIDM D+ QQ Q
Sbjct: 226 LGGGAVVLGAESRASGDVAIDMMDSRTSQQLQ---------------------------- 257
Query: 295 YEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVES 354
D+ + +IQSRADTMQNIESTIVELG IFQQLAHMV+EQEE ++RID N+L +L VE+
Sbjct: 258 LIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEA 317
Query: 355 AH 356
AH
Sbjct: 318 AH 319
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 396 KYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
K + ET ID N+L +L VE+AH EILKYFQSVTSNRWLM+K
Sbjct: 295 KEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 201/302 (66%), Gaps = 48/302 (15%)
Query: 63 RERTLEFNNVIRSLQGK-NIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLE 121
R+RT EF + +SLQ + N ++ K RA V+ EF L+AK IGK++S+T+AKLE
Sbjct: 58 RDRTQEFLSACKSLQTRQNGIQT--NKPALRA--VRQRSEFTLMAKRIGKDLSNTFAKLE 113
Query: 122 KLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLS 181
KLT+LAKRKSLF+DK EI+ELTYIIK+D+NSLN+QIA+LQ + + S +HL +
Sbjct: 114 KLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKG---SQSGRHLQT 170
Query: 182 HSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSGPHH 241
HS+++V++LQSKLASMS +FK+VLEVRTENLKQ +SRR+Q+S AP S P A P+H
Sbjct: 171 HSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFS--RAPVSALPLA---PNH 225
Query: 242 --QGSVLL-----ADEQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMML 294
G+V+L A + AIDM D+ QQ Q
Sbjct: 226 LGGGAVVLGAESHASKDVAIDMMDSRTSQQLQ---------------------------- 257
Query: 295 YEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVES 354
D+ + +IQSRADTMQNIESTIVELG IFQQLAHMV+EQEE ++RID N+L +L VE+
Sbjct: 258 LIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEA 317
Query: 355 AH 356
AH
Sbjct: 318 AH 319
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 396 KYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
K + ET ID N+L +L VE+AH EILKYFQSVTSNRWLM+K
Sbjct: 295 KEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 193/300 (64%), Gaps = 40/300 (13%)
Query: 63 RERTLEFNNVIRSLQGKNIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKLEK 122
R+RT EF + +SLQ + + + A+ EF L+A+ IGK++S+T+AKLEK
Sbjct: 58 RDRTQEFQSACKSLQSRQNGIQTSKPALHAAR---QCSEFTLMARRIGKDLSNTFAKLEK 114
Query: 123 LTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQHLLSH 182
LT+LAKRKSLF+DK EI+ELTYIIK+D+NSLN+QIA+LQ + + S +HL +H
Sbjct: 115 LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKG---SQSGRHLQTH 171
Query: 183 SSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMS----G 238
S+++V++LQSKLASMS +FK+VLEVRTENLKQ ++RR+Q+S AP S P A + G
Sbjct: 172 SNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFS--RAPVSALPLAPNNLGGG 229
Query: 239 PHHQGSVLLADEQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQ 298
P G+ A AIDM D QQ Q D+
Sbjct: 230 PIILGAESRASRDVAIDMMDPRTSQQLQ----------------------------LIDE 261
Query: 299 SEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRD 358
+ +IQSRADTMQNIESTIVELG IFQQLAHMV+EQEE ++RID N+L +L VE+AH +
Sbjct: 262 QDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSE 321
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 396 KYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
K + ET ID N+L +L VE+AH EILKYFQSVTSNRWLM+K
Sbjct: 295 KEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 201/323 (62%), Gaps = 42/323 (13%)
Query: 39 SKNYIGPHFSCSMTLKHHPNHNMPRERTLEFNNVIRSLQGK-NIVRAVAAKDVRRAQFVQ 97
S + I P + + P+ R+RT EF + +SLQ + N ++ K A +
Sbjct: 34 SSSDIAPLPTPVALVPSPPDTMSCRDRTQEFLSACKSLQSRQNGIQT--NKPALHA--TR 89
Query: 98 NYGEFMLIAKTIGKNISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQ 157
EF L+A+ IGK++S+T+AKLEKLT+LAKRKSLF+DK EI+ELTYIIK+D+NSLN+Q
Sbjct: 90 QCSEFTLMARRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQ 149
Query: 158 IAKLQQVGKHQRDVISSGHQHLLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKS 217
IA+LQ + + S +HL +HS+++V++LQSKLASMS +FK+VLEVRTENLKQ ++
Sbjct: 150 IAQLQDFVRAKG---SQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRN 206
Query: 218 RRDQYSGGGAPSSLPPAAMS----GPHHQGSVLLADEQCAIDMSDTALQQQQQQKTMMLY 273
RR+Q+S AP S P A + GP G A AIDM D QQ Q
Sbjct: 207 RREQFS--RAPVSALPLAPNNLGGGPIVLGGESRASRDVAIDMMDPRTSQQLQ------- 257
Query: 274 EDQNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQE 333
D+ + +IQSRADTMQNIESTIVELG IFQQLAHMV+E
Sbjct: 258 ---------------------LIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKE 296
Query: 334 QEEMVERIDANILDTELHVESAH 356
QEE ++RID N+L +L VE+AH
Sbjct: 297 QEETIQRIDENVLGAQLDVEAAH 319
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 396 KYKSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
K + ET ID N+L +L VE+AH EILKYFQSVTSNRWLM+K
Sbjct: 295 KEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q20797|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=3 SV=1
Length = 413
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 180/320 (56%), Gaps = 56/320 (17%)
Query: 61 MP-RERTLEFNNVIRSLQGKNIVRAVAAKDVR---RAQFVQNYGEFMLIAKTIGKNISST 116
MP R+RT EF +S + K AA +R + + + +F +AK IGK +S T
Sbjct: 107 MPSRDRTSEFRATAKSYEMK-----AAANGIRPQPKHEMLSESVQFNQLAKRIGKELSQT 161
Query: 117 YAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVI---S 173
AK+EKL AK+KS + ++ ++I L+ I+K D+ LN+QI +LQ+ K + + +
Sbjct: 162 CAKMEKLAEYAKKKSCYEER-SQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQN 220
Query: 174 SGHQHLLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGA-PSSLP 232
SGH L VV+ LQSKLA++ ++++VLE+ TE +K K+RRD++S G A P LP
Sbjct: 221 SGHIQL------VVVGLQSKLANVGKDYQSVLEISTETMKAEKNRRDKFSSGAAVPMGLP 274
Query: 233 PAAMSGPHHQGSVLLADEQ-----CAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQ 287
++ SG + + +L DEQ A+DM AL Q Q+TM
Sbjct: 275 SSS-SGANVRSKLLQDDEQHGSSSIALDMG--ALSNMQSQQTM----------------- 314
Query: 288 QQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILD 347
QQ+ D S ++ Q+R++TM IE +I ELG IF QLA +V EQ EM+ RID+N+ D
Sbjct: 315 QQR------DSSLEYAQARSNTMATIEGSISELGQIFSQLASLVSEQGEMITRIDSNVED 368
Query: 348 TELHVESAHRD-----QNIC 362
T L+++ AH + QNI
Sbjct: 369 TALNIDMAHSELVRYLQNIS 388
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 398 KSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
+ E T ID+N+ DT L+++ AH E+++Y Q+++ NRWLMI+
Sbjct: 355 QGEMITRIDSNVEDTALNIDMAHSELVRYLQNISKNRWLMIQ 396
>sp|O13644|SED5_SCHPO Integral membrane protein sed5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sed5 PE=3 SV=1
Length = 309
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 171/304 (56%), Gaps = 39/304 (12%)
Query: 63 RERTLEFNNVI---RS-LQGKNIVRAVAAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYA 118
++RT EF + RS L+ +AV D + Q EF IA+ I I+ T
Sbjct: 4 QDRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQ----KSEFTRIAQKIANQINQTGE 59
Query: 119 KLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGHQH 178
KL+KL+ LAKRK+LF+D+P EIQELT+ IK+ L+SLN IA LQQV K R+ + +Q
Sbjct: 60 KLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNRNKPAQMNQ- 118
Query: 179 LLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSG 238
HS +VV++LQ+ LA+ S FK++LE+RT+N+K +++R +++ + ++ P
Sbjct: 119 ---HSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANP------ 169
Query: 239 PHHQGSVLLADEQCAI----DMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMML 294
L + +I D +D + + Y N+ D A + +Q M L
Sbjct: 170 --------LINSGNSISPFADYNDPKPEANED------YLSLNLGDGANTRYEQ---MAL 212
Query: 295 YEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVES 354
E Q++ + Q R ++QNIESTI ELGGIF QLA MV EQ E V+RID + D ++ S
Sbjct: 213 LESQTDTYSQQRMSSIQNIESTITELGGIFSQLAQMVSEQRETVQRIDMHTDDIVSNIGS 272
Query: 355 AHRD 358
A R+
Sbjct: 273 AQRE 276
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 400 ETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVV 453
ET ID + D ++ SA REI+K+++ ++SNR L+ KIF ++I FF+ +V+
Sbjct: 254 ETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNRALLFKIFGIVIIFFLLWVL 307
>sp|Q9LK09|SYP32_ARATH Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1
Length = 347
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 21/308 (6%)
Query: 63 RERTLEFNNVIRSLQGKNIVRAVAAKDV----------RRAQFVQNYGEFMLIAKTIGKN 112
R+R+ EF ++ +L+ ++I A AA +V RR + N EF A IG
Sbjct: 11 RDRSDEFFKIVETLR-RSIAPAPAANNVPYGNNRNDGARREDLI-NKSEFNKRASHIGLA 68
Query: 113 ISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVI 172
I+ T KL KL LAKR S+F+D EIQELT +IK+++++LN + LQ Q D
Sbjct: 69 INQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLFRSSQNDEG 128
Query: 173 SSGHQHLLS-HSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSL 231
++ S HS++VV L+ +L + EFK+VL +RTEN+K +SRR +S + S
Sbjct: 129 NNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKEST 188
Query: 232 PPAAMSGPHHQGSVLLADEQCAIDMSDTALQQQQQQKTMMLYEDQN---MSDTALQQQQQ 288
P P + A E + ++ + Q E ++ + + QQQQQ
Sbjct: 189 NPFVRQRPLAAKAA--ASESVPLPWANGSSSSSSQLVPWKPGEGESSPLLQQSQQQQQQQ 246
Query: 289 QKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDT 348
Q+ M+ +D ++Q RA+ + +ESTI EL IF QLA MV +Q E+ RID N+ DT
Sbjct: 247 QQQMVPLQD---TYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDT 303
Query: 349 ELHVESAH 356
+VE A
Sbjct: 304 LANVEGAQ 311
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 398 KSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVVFLA 456
+ E ID N+ DT +VE A ++ +Y S++SNRWLM+KIF VLI F + F+ F+A
Sbjct: 289 QGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347
>sp|Q01590|SED5_YEAST Integral membrane protein SED5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SED5 PE=1 SV=1
Length = 340
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 136/278 (48%), Gaps = 41/278 (14%)
Query: 100 GEFMLIAKTIGKNISSTYAKLEKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIA 159
EF A I ISST L KL +LAKRK +FND P EI EL+++IK + ++ Q +
Sbjct: 52 SEFQKKASGIAHEISSTAQLLSKLAVLAKRKPMFNDNPVEIAELSFLIKRKIYAIEQSLV 111
Query: 160 KLQQVGKHQRDVI------SSGHQHLLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLK 213
+L Q+ K DV SS + HS +VV L +++ ++S FK+VLE R + L+
Sbjct: 112 QLSQLKKT--DVNGNTSNQSSKQPSAVQHSKNVVNLLNTQMKNISGSFKDVLEER-QRLE 168
Query: 214 QAKSRRDQ---YSGGGAPSS----------LPPAAMSGPHHQGSVLLADEQCAIDMSDTA 260
A R Q G AP+ L S P + + E+ +
Sbjct: 169 MANKDRWQKLTTDTGHAPADDQTQSNHAADLTTYNNSNPFMTSLLDESSEKNNNSSNQGE 228
Query: 261 LQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVEL 320
L Q +ML E+ +S+ ++Q R ++ IESTI E+
Sbjct: 229 LSFPQNDSQLMLMEEGQLSNNV-------------------YLQERNRAVETIESTIQEV 269
Query: 321 GGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRD 358
G +FQQLA MVQEQ E+++RIDAN+ D +L++ A R+
Sbjct: 270 GNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRE 307
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 398 KSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIK 439
+ E IDAN+ D +L++ A RE+LKYF + SNRWL K
Sbjct: 283 QGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRWLAAK 324
>sp|Q9FFK1|SYP31_ARATH Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1
Length = 336
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 152/305 (49%), Gaps = 21/305 (6%)
Query: 63 RERTLEFNNVIRSLQGKNIVRAV--AAKDVRRAQFVQNYGEFMLIAKTIGKNISSTYAKL 120
R+RT+E +++ ++L+ + +V D ++ EF A IG I T K+
Sbjct: 6 RDRTVELHSLSQTLKKIGAIPSVHQDEDDPASSKRSSPGSEFNKKASRIGLGIKETSQKI 65
Query: 121 EKLTLLAKRKSLFNDKPTEIQELTYIIKEDLNSLNQQIAKLQQVGKHQRDVISSGH--QH 178
+L LAK+ ++FND+ EIQELT +I+ D+ LN ++ LQ + Q ++ G+ Q
Sbjct: 66 TRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTL---QNMELADGNYSQD 122
Query: 179 LLSHSSSVVLALQSKLASMSTEFKNVLEVRTENLKQAKSRRDQYSGGGAPSSLPPAAMSG 238
+ H ++V L+++L + + ++VL R+EN+K ++R+ +S A S PP +
Sbjct: 123 QVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDS-PPQNNAK 181
Query: 239 PHHQGSVLLAD-------EQCAIDMSDTALQQQQQQKTMMLYEDQNMSDTALQQQQQQKT 291
+ + +Q + +T Q + E+ A QQ +
Sbjct: 182 SVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSAIEN------APSQQMEMSL 235
Query: 292 MMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELH 351
+ + E + QSRA + ++ES I EL GIF QLA MV +Q E+ RID N+ ++ ++
Sbjct: 236 LQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVN 295
Query: 352 VESAH 356
VE A
Sbjct: 296 VEGAR 300
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 398 KSETYTEIDANILDTELHVESAHREILKYFQSVTSNRWLMIKIFAVLIFFFIFFVVFLA 456
+ E ID N+ ++ ++VE A +L++ ++SNRWLM+KIFAV+I F I F+ F+A
Sbjct: 278 QGELAIRIDDNMDESLVNVEGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336
>sp|Q9P6P1|TLG2_SCHPO t-SNARE affecting a late Golgi compartment protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg2 PE=3 SV=1
Length = 301
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 275 DQNMSDTALQQQQ-QQKTMMLYEDQSEQFIQ-SRADTMQNIESTIVELGGIFQQLAHMVQ 332
D+ +SD A+ Q QQ +M + + EQ I+ RA + I I+EL +FQ L +V
Sbjct: 181 DETVSDVAISQSTIQQVALMEEQGEDEQAIRHERA--VAKIAEGIIELAQMFQDLQVLVI 238
Query: 333 EQEEMVERIDANILDTELHVESAHRD 358
EQ +V+RID NI T++H +SA ++
Sbjct: 239 EQGALVDRIDFNIEQTQVHAKSAEKE 264
>sp|G3V7P1|STX12_RAT Syntaxin-12 OS=Rattus norvegicus GN=Stx12 PE=1 SV=1
Length = 274
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 285 QQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDAN 344
Q Q Q+ +Q + I+ R +Q +E+ I+++ IF+ LA M+ +Q ++++ I+AN
Sbjct: 163 QMQSQEEEAAITEQDLELIKERETAIQQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN 222
Query: 345 ILDTELHVESA 355
+ +E+HVE A
Sbjct: 223 VESSEVHVERA 233
>sp|Q86Y82|STX12_HUMAN Syntaxin-12 OS=Homo sapiens GN=STX12 PE=1 SV=1
Length = 276
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%)
Query: 285 QQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDAN 344
Q Q Q+ + +Q + I+ R ++ +E+ I+++ IF+ LA M+ +Q ++++ I+AN
Sbjct: 163 QMQSQEDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN 222
Query: 345 ILDTELHVESA 355
+ +E+HVE A
Sbjct: 223 VESSEVHVERA 233
>sp|Q5RBW6|STX12_PONAB Syntaxin-12 OS=Pongo abelii GN=STX12 PE=2 SV=1
Length = 276
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%)
Query: 285 QQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDAN 344
Q Q Q + +Q + I+ R ++ +E+ I+++ IF+ LA M+ +Q ++++ I+AN
Sbjct: 163 QMQSQDDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN 222
Query: 345 ILDTELHVESA 355
+ +E+HVE A
Sbjct: 223 VESSEVHVERA 233
>sp|Q3ZBT5|STX7_BOVIN Syntaxin-7 OS=Bos taurus GN=STX7 PE=2 SV=1
Length = 261
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 39/56 (69%)
Query: 302 FIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHR 357
IQ R +++ +E+ I+++ IF+ L M+ EQ ++++ I+AN+ + E+HV+ A++
Sbjct: 167 LIQERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQ 222
>sp|Q9ER00|STX12_MOUSE Syntaxin-12 OS=Mus musculus GN=Stx12 PE=1 SV=1
Length = 274
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%)
Query: 285 QQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDAN 344
Q Q Q+ +Q + I+ R ++ +E+ I+++ IF+ LA M+ +Q ++++ I+AN
Sbjct: 163 QMQSQEEEAAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEAN 222
Query: 345 ILDTELHVESA 355
+ +E+HVE A
Sbjct: 223 VESSEVHVERA 233
>sp|O70439|STX7_MOUSE Syntaxin-7 OS=Mus musculus GN=Stx7 PE=1 SV=3
Length = 261
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 266 QQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQ 325
++K ++ +E Q +Q ++ + ED + I R +++ +E+ I+++ IF+
Sbjct: 138 KEKNLVSWESQTQPQVQVQDEE------ITEDDL-RLIHERESSIRQLEADIMDINEIFK 190
Query: 326 QLAHMVQEQEEMVERIDANILDTELHVESAHR 357
L M+ EQ +M++ I+AN+ E+HV+ A++
Sbjct: 191 DLGMMIHEQGDMIDSIEANVESAEVHVQQANQ 222
>sp|Q9USH7|PSY1_SCHPO Syntaxin-like protein psy1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=psy1 PE=3 SV=1
Length = 284
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERI--DANILDTELHVESAHRDQN 360
+Q R ++ IE TI EL +FQ +A MVQEQE MV++I DA + T + + H D+
Sbjct: 184 VQERHADIKRIERTIAELAQLFQDMATMVQEQEPMVDKIVTDAVNVRTNMGEGTQHMDRA 243
Query: 361 ICISTKTQAHGDQNTWI 377
I K+ + WI
Sbjct: 244 I----KSARAARKKKWI 256
>sp|Q5R602|STX7_PONAB Syntaxin-7 OS=Pongo abelii GN=STX7 PE=2 SV=3
Length = 261
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 38/56 (67%)
Query: 302 FIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHR 357
I R +++ +E+ I+++ IF+ L M+ EQ ++++ I+AN+ + E+HV+ A++
Sbjct: 167 LIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQ 222
>sp|O15400|STX7_HUMAN Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4
Length = 261
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 39/57 (68%)
Query: 301 QFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHR 357
+ I R +++ +E+ I+++ IF+ L M+ EQ ++++ I+AN+ + E+HV+ A++
Sbjct: 166 RLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQ 222
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 276 QNMSDTALQQQQQQKTMMLYEDQSEQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQE 335
++ S LQ+QQQ L++ +E +++ R + + + ++E+ IF+++ +V +Q
Sbjct: 225 EDYSKRTLQRQQQ-----LHDTSAEAYLRERDEEITQLARGVLEVSTIFREMQDLVVDQG 279
Query: 336 EMVERIDANILDTELHVESAHRDQN 360
+V+RID N+ +T + ++SA ++ N
Sbjct: 280 TIVDRIDYNLENTVVELKSADKELN 304
>sp|O70257|STX7_RAT Syntaxin-7 OS=Rattus norvegicus GN=Stx7 PE=1 SV=4
Length = 261
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 38/57 (66%)
Query: 301 QFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHR 357
+ I R +++ +E+ I+++ IF+ L M+ EQ ++++ I+AN+ E+HV+ A++
Sbjct: 166 RLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQ 222
>sp|Q13277|STX3_HUMAN Syntaxin-3 OS=Homo sapiens GN=STX3 PE=1 SV=3
Length = 289
Score = 40.0 bits (92), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I+ R + +ES+I EL +F +A +V+ Q EM++ I+ N++ T HVE A +
Sbjct: 194 IEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARDETKKA 253
Query: 363 ISTKTQA 369
+ ++QA
Sbjct: 254 VKYQSQA 260
>sp|Q08850|STX4_RAT Syntaxin-4 OS=Rattus norvegicus GN=Stx4 PE=1 SV=1
Length = 298
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I +R +Q +E TI EL IF LA V+ Q EM+ RI+ NIL + +VE I
Sbjct: 203 ISARHSEIQQLERTIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKIA 262
Query: 363 ISTKTQAH 370
+ + +A
Sbjct: 263 LENQKKAR 270
>sp|P32856|STX2_HUMAN Syntaxin-2 OS=Homo sapiens GN=STX2 PE=1 SV=3
Length = 288
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I+SR + +E++I EL +F +A V+ Q EM+ I+ N+++ +VE A +
Sbjct: 194 IESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVEHAKEETKKA 253
Query: 363 ISTKTQAHGDQNTWI 377
I K Q+ + WI
Sbjct: 254 I--KYQSKARRKKWI 266
>sp|Q54JY7|STX7A_DICDI Syntaxin-7A OS=Dictyostelium discoideum GN=syn7A PE=1 SV=1
Length = 356
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 273 YEDQNMSDT--ALQQQQQQKTMMLYEDQSE---QFIQSRADTMQNIESTIVELGGIFQQL 327
Y+D N D +L + +++ + E + E IQ R + ++ IE +IVE+ IF L
Sbjct: 227 YDDDNREDEHQSLMESSRRQQLAQIEAEREYQNSIIQERDEGIRKIEQSIVEINEIFVDL 286
Query: 328 AHMVQEQEEMVERIDANILDTELHVESA 355
+ +V EQ M+ I+A++ T ++ +
Sbjct: 287 SGLVAEQGVMINTIEASLESTTINTKEG 314
>sp|Q08849|STX3_RAT Syntaxin-3 OS=Rattus norvegicus GN=Stx3 PE=2 SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQ 359
I+ R + +ES+I EL +F +A +V+ Q EM++ I+ N++ T HVE A RD+
Sbjct: 194 IEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKA-RDE 249
>sp|Q64704|STX3_MOUSE Syntaxin-3 OS=Mus musculus GN=Stx3 PE=2 SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQ 359
I+ R + +ES+I EL +F +A +V+ Q EM++ I+ N++ T HVE A RD+
Sbjct: 194 IEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKA-RDE 249
>sp|P32867|SSO1_YEAST Protein SSO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SSO1 PE=1 SV=2
Length = 290
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVES--AHRDQN 360
+Q+R + +E ++ EL +F + +V EQ+E V+ ID N+ D +L VE H D+
Sbjct: 193 VQARHQELLKLEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKA 252
Query: 361 ICISTKTQ 368
+ + K +
Sbjct: 253 VKSARKAR 260
>sp|Q3SWZ3|STX4_BOVIN Syntaxin-4 OS=Bos taurus GN=STX4 PE=2 SV=1
Length = 297
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I +R +Q +E +I EL IF LA V+ Q EM+ RI+ NIL + +VE +
Sbjct: 203 ISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKVA 262
Query: 363 ISTKTQAH 370
+ + +A
Sbjct: 263 LENQKKAR 270
>sp|O16000|STX1A_CAEEL Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1
Length = 291
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +ES+I EL +F +A +V+ Q EMV+RI+ N+ + V+ A D
Sbjct: 196 IEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKA 255
Query: 363 ISTKTQA 369
+ +++A
Sbjct: 256 VQYQSKA 262
>sp|P70452|STX4_MOUSE Syntaxin-4 OS=Mus musculus GN=Stx4 PE=1 SV=1
Length = 298
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I +R +Q +E +I EL IF LA V+ Q EM+ RI+ NIL + +VE I
Sbjct: 203 ISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKIA 262
Query: 363 ISTKTQAH 370
+ + +A
Sbjct: 263 LENQKKAR 270
>sp|P32854|PEP12_YEAST Syntaxin PEP12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PEP12 PE=1 SV=2
Length = 288
Score = 37.4 bits (85), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 302 FIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDT 348
I+ R + NIE I EL +F+ L +VQ+Q +V+ I+ANI T
Sbjct: 197 LIEQRDQEISNIERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTT 243
>sp|A8WVD0|STX1A_CAEBR Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1
Length = 293
Score = 37.4 bits (85), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +ES+I EL +F +A +V+ Q EMV+RI+ N+ + V+ A D
Sbjct: 198 IEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKA 257
Query: 363 ISTKTQA 369
+ +++A
Sbjct: 258 VQYQSKA 264
>sp|Q16932|STX_APLCA Syntaxin OS=Aplysia californica PE=2 SV=1
Length = 290
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 41/68 (60%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +E++I +L +F +A +V+ Q EM++RI+ N+ ++E+A D
Sbjct: 197 IEARHNDIMKLETSIRDLHDMFMDMAMLVESQGEMIDRIEYNVEQAVDYIETAKMDTKKA 256
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 257 VKYQSKAR 264
>sp|P50279|STX2_RAT Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2
Length = 290
Score = 36.6 bits (83), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I+SR + +E++I EL +F +A V+ Q EMV I+ N++++ +VE A +
Sbjct: 196 IESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKA 255
Query: 363 ISTKTQAHGDQNTW 376
I K Q+ + W
Sbjct: 256 I--KYQSKARRKKW 267
>sp|Q00262|STX2_MOUSE Syntaxin-2 OS=Mus musculus GN=Stx2 PE=1 SV=1
Length = 289
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I+SR + +E++I EL +F +A V+ Q EMV I+ N++++ +VE A +
Sbjct: 195 IESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKA 254
Query: 363 ISTKTQAHGDQNTW 376
I K Q+ + W
Sbjct: 255 I--KYQSKARRKKW 266
>sp|P39926|SSO2_YEAST Protein SSO2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SSO2 PE=1 SV=2
Length = 295
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVE 353
+Q+R + +E T+ EL +F + +V EQ+E V+ ID N+ D + VE
Sbjct: 197 VQARHQELLKLEKTMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQQDVE 247
>sp|P32850|STX1A_BOVIN Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1
Length = 288
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + +E++I EL +F +A +V+ Q EM++RI+ N+ + +VE A D
Sbjct: 195 IETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKA 254
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 255 VKYQSKAR 262
>sp|O65359|SYP41_ARATH Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1
Length = 322
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 259 TALQQQQQQKTMMLYEDQNMSDTALQQQQQQKTMMLYEDQ------SEQFIQSRADTMQN 312
T L++ +QQK + + N+S + ++ ML E Q SE+ R +Q
Sbjct: 179 TYLKRLRQQKEDGMDLEMNLSRNRYRPEEDDFGDMLNEHQMSKIKKSEEVSVEREKEIQQ 238
Query: 313 IESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNICISTKTQAHG 371
+ ++ +L I + L+ +V +Q +V+RID NI + VE + + + +TQ HG
Sbjct: 239 VVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLK--QLQKAERTQRHG 295
>sp|Q12846|STX4_HUMAN Syntaxin-4 OS=Homo sapiens GN=STX4 PE=1 SV=2
Length = 297
Score = 36.2 bits (82), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAH 356
I +R +Q +E +I EL IF LA V+ Q EM+ RI+ NIL + +VE
Sbjct: 203 ISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVERGQ 256
>sp|Q12241|VAM3_YEAST Syntaxin VAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VAM3 PE=1 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 304 QSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAH------- 356
Q R+ + I + + E+ IF QL +V+EQ E V ID NI ++++A+
Sbjct: 194 QERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDENISHLHDNMQNANKQLTRAD 253
Query: 357 ---RDQNIC 362
RD+N C
Sbjct: 254 QHQRDRNKC 262
>sp|O35526|STX1A_MOUSE Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3
Length = 288
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + +E++I EL +F +A +V+ Q EM++RI+ N+ +VE A D
Sbjct: 195 IETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 254
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 255 VKYQSKAR 262
>sp|Q5R4L2|STX1A_PONAB Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1
Length = 288
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + +E++I EL +F +A +V+ Q EM++RI+ N+ +VE A D
Sbjct: 195 IETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 254
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 255 VKYQSKAR 262
>sp|O94651|PEP12_SCHPO Syntaxin pep12 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pep12 PE=1 SV=2
Length = 263
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 300 EQFIQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHR 357
++ I R ++N+ I EL IF+ L+ ++ EQ E+V I+ N+ +T + ++A R
Sbjct: 169 QRLINERQGEIENLTQGINELNEIFRDLSTIINEQGELVTNIEYNVGNTSTNTKNASR 226
>sp|Q16623|STX1A_HUMAN Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1
Length = 288
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + +E++I EL +F +A +V+ Q EM++RI+ N+ +VE A D
Sbjct: 195 IETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 254
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 255 VKYQSKAR 262
>sp|P32851|STX1A_RAT Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1
Length = 288
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + +E++I EL +F +A +V+ Q EM++RI+ N+ +VE A D
Sbjct: 195 IETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 254
Query: 363 ISTKTQAH 370
+ +++A
Sbjct: 255 VKYQSKAR 262
>sp|P61265|STX1B_RAT Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=1
Length = 288
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +E++I EL +F +A +V+ Q EM++RI+ N+ + +VE A D
Sbjct: 194 IETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKA 253
Query: 363 ISTKTQA 369
+ +++A
Sbjct: 254 VKYQSKA 260
>sp|P61264|STX1B_MOUSE Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1
Length = 288
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +E++I EL +F +A +V+ Q EM++RI+ N+ + +VE A D
Sbjct: 194 IETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKA 253
Query: 363 ISTKTQA 369
+ +++A
Sbjct: 254 VKYQSKA 260
>sp|P61266|STX1B_HUMAN Syntaxin-1B OS=Homo sapiens GN=STX1B PE=1 SV=1
Length = 288
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 303 IQSRADTMQNIESTIVELGGIFQQLAHMVQEQEEMVERIDANILDTELHVESAHRDQNIC 362
I++R + + +E++I EL +F +A +V+ Q EM++RI+ N+ + +VE A D
Sbjct: 194 IETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKA 253
Query: 363 ISTKTQA 369
+ +++A
Sbjct: 254 VKYQSKA 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,534,350
Number of Sequences: 539616
Number of extensions: 9250164
Number of successful extensions: 48532
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 325
Number of HSP's that attempted gapping in prelim test: 35905
Number of HSP's gapped (non-prelim): 5315
length of query: 672
length of database: 191,569,459
effective HSP length: 124
effective length of query: 548
effective length of database: 124,657,075
effective search space: 68312077100
effective search space used: 68312077100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)