BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3564
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3T126|CNIH4_BOVIN Protein cornichon homolog 4 OS=Bos taurus GN=CNIH4 PE=2 SV=1
Length = 139
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 71/82 (86%)
Query: 7 VTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLIG 66
VTVL+L++ H+++FL+N+P++AWN+Y Y VPSGNMGVFDPTE++NR +K+HM+ +I
Sbjct: 58 VTVLMLISLHWFIFLLNLPVAAWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIK 117
Query: 67 MGFYLVIFFVYLYSMILSLLRD 88
+GF+L+ FF+YLYSMIL+L+ D
Sbjct: 118 LGFHLLCFFMYLYSMILALIND 139
>sp|Q5R9M4|CNIH4_PONAB Protein cornichon homolog 4 OS=Pongo abelii GN=CNIH4 PE=2 SV=1
Length = 139
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 70/82 (85%)
Query: 7 VTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLIG 66
VTVLLL++ H+++FL+N+P++ WN+Y Y VPSGNMGVFDPTE++NR +K+HM+ +I
Sbjct: 58 VTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIK 117
Query: 67 MGFYLVIFFVYLYSMILSLLRD 88
+GF+L+ FF+YLYSMIL+L+ D
Sbjct: 118 LGFHLLCFFMYLYSMILALIND 139
>sp|Q9P003|CNIH4_HUMAN Protein cornichon homolog 4 OS=Homo sapiens GN=CNIH4 PE=1 SV=1
Length = 139
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 70/82 (85%)
Query: 7 VTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLIG 66
VTVLLL++ H+++FL+N+P++ WN+Y Y VPSGNMGVFDPTE++NR +K+HM+ +I
Sbjct: 58 VTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIK 117
Query: 67 MGFYLVIFFVYLYSMILSLLRD 88
+GF+L+ FF+YLYSMIL+L+ D
Sbjct: 118 LGFHLLCFFMYLYSMILALIND 139
>sp|Q9CX13|CNIH4_MOUSE Protein cornichon homolog 4 OS=Mus musculus GN=Cnih4 PE=2 SV=1
Length = 139
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 70/82 (85%)
Query: 7 VTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLIG 66
VTVL+L++ H+++FL+N+P++ WN+Y + VPSGNMGVFDPTE++NR +K+HM+ +I
Sbjct: 58 VTVLMLVSLHWFIFLLNLPVATWNIYRFIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIK 117
Query: 67 MGFYLVIFFVYLYSMILSLLRD 88
+GFYL+ FF+YLYSMIL+L+ D
Sbjct: 118 LGFYLLCFFMYLYSMILALIND 139
>sp|Q6P3N5|CNIH4_XENTR Protein cornichon homolog 4 OS=Xenopus tropicalis GN=cnih4 PE=2
SV=1
Length = 139
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 71/82 (86%)
Query: 7 VTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLIG 66
V+VL+L++ H+++F++N+P++AWN+Y + VPSGN+GVFDPTE++NR +K+HM+ +I
Sbjct: 58 VSVLMLVSLHWFIFILNLPVAAWNIYRFIMVPSGNLGVFDPTEIHNRGQLKSHMKEAMIK 117
Query: 67 MGFYLVIFFVYLYSMILSLLRD 88
+GF+L+ FF+YLYSMIL+L+ D
Sbjct: 118 LGFHLLCFFIYLYSMILALIND 139
>sp|Q22361|YFR3_CAEEL Uncharacterized protein T09E8.3 OS=Caenorhabditis elegans
GN=T09E8.3 PE=3 SV=2
Length = 145
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLI 65
TVL + + L N+P++ +++Y Y P SG G++DPT + NR ++ + +R I
Sbjct: 63 TVLFIFSWQLISILANLPLAFYHIYTYAKRPVMSGP-GIYDPTTILNRSTLSSTLRISWI 121
Query: 66 GMGFYLVIFFVYLYSMILSLLRDN 89
+ FYLV FF YLY+MI +L+ N
Sbjct: 122 KLAFYLVSFFYYLYAMIYTLVTSN 145
>sp|P53173|ERV14_YEAST ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV14 PE=1 SV=3
Length = 138
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 6 GVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNCLI 65
+++L LL G++++FL+N+P+ A+N+ + Y+ + + D TE++ ++ H R +
Sbjct: 57 ALSLLFLLNGYWFVFLLNLPVLAYNLNKIYN----KVQLLDATEIFR--TLGKHKRESFL 110
Query: 66 GMGFYLVIFFVYLYSMILSLLRDNPLD 92
+GF+L++FF YLY MI++L+ ++ D
Sbjct: 111 KLGFHLLMFFFYLYRMIMALIAESGDD 137
>sp|P49858|CNI_DROME Protein cornichon OS=Drosophila melanogaster GN=cni PE=1 SV=1
Length = 144
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 4 QVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMR 61
+ + +L L G ++ +N+P+ A++++ Y + P SG G++DPT + D++ +MR
Sbjct: 59 HIFLNLLFLFCGEWFSLCINIPLIAYHIWRYKNRPVMSGP-GLYDPTTVLKTDTLYRNMR 117
Query: 62 NCLIGMGFYLVIFFVYLYSMILSLL 86
I + YL+ FF Y+Y M+ SL+
Sbjct: 118 EGWIKLAVYLISFFYYIYGMVYSLI 142
>sp|P52159|CNI_DROVI Protein cornichon OS=Drosophila virilis GN=cni PE=3 SV=2
Length = 144
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 15 GHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLIGMGFYLV 72
G +Y +N+P+ A++++ Y + P SG G++DPT + D++ ++R I + YL+
Sbjct: 70 GEWYSLCLNIPLIAYHIWRYKNRPLMSGP-GLYDPTTVLKTDTLSRNLREGWIKLAVYLI 128
Query: 73 IFFVYLYSMILSLL 86
FF Y+Y M+ SL+
Sbjct: 129 SFFYYIYGMVYSLI 142
>sp|Q5RDB5|CNIH_PONAB Protein cornichon homolog OS=Pongo abelii GN=CNIH PE=2 SV=1
Length = 144
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLI 65
V+ L + +N+P+ A++++ Y S P SG G++DPT + N D + +
Sbjct: 63 CVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGP-GLYDPTTIMNADILAYCQKEGWC 121
Query: 66 GMGFYLVIFFVYLYSMILSLLRD 88
+ FYL+ FF YLY MI L+
Sbjct: 122 KLAFYLLAFFYYLYGMIYVLVSS 144
>sp|O35372|CNIH_MOUSE Protein cornichon homolog OS=Mus musculus GN=Cnih PE=2 SV=2
Length = 144
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLI 65
V+ L + +N+P+ A++++ Y S P SG G++DPT + N D + +
Sbjct: 63 CVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGP-GLYDPTTIMNADILAYCQKEGWC 121
Query: 66 GMGFYLVIFFVYLYSMILSLLRD 88
+ FYL+ FF YLY MI L+
Sbjct: 122 KLAFYLLAFFYYLYGMIYVLVSS 144
>sp|O95406|CNIH_HUMAN Protein cornichon homolog OS=Homo sapiens GN=CNIH PE=1 SV=1
Length = 144
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLI 65
V+ L + +N+P+ A++++ Y S P SG G++DPT + N D + +
Sbjct: 63 CVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGP-GLYDPTTIMNADILAYCQKEGWC 121
Query: 66 GMGFYLVIFFVYLYSMILSLLRD 88
+ FYL+ FF YLY MI L+
Sbjct: 122 KLAFYLLAFFYYLYGMIYVLVSS 144
>sp|Q5BIN6|CNIH_BOVIN Protein cornichon homolog OS=Bos taurus GN=CNIH PE=2 SV=1
Length = 144
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVP--SGNMGVFDPTELYNRDSIKNHMRNCLI 65
V+ L + +N+P+ A++++ Y S P SG G++DPT + N D + +
Sbjct: 63 CVMFLCAAEWLTLGLNMPLLAYHIWRYMSRPVMSGP-GLYDPTTIMNADILAYCQKEGWC 121
Query: 66 GMGFYLVIFFVYLYSMILSLLRD 88
+ FYL+ FF YLY MI L+
Sbjct: 122 KLAFYLLAFFYYLYGMIYVLVSS 144
>sp|Q5BL21|CNIH2_DANRE Protein cornichon homolog 2 OS=Danio rerio GN=cnih2 PE=2 SV=1
Length = 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNCLIG 66
++ + G + +N+P+ ++++ ++ P+ G+ ++DP + N D + +
Sbjct: 79 CLMFMCAGEWVTLGLNIPLLLYHLWRFFHRPADGSEVMYDPVSVMNADILNYCQKESWCK 138
Query: 67 MGFYLVIFFVYLYSMILSLL 86
+GFYL+ FF YLYSM+ +L+
Sbjct: 139 LGFYLLSFFYYLYSMVYALV 158
>sp|D0Q0Y7|CNIH3_RAT Protein cornichon homolog 3 OS=Rattus norvegicus GN=Cnih3 PE=1 SV=1
Length = 160
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 TVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGV-FDPTELYNRDSIKNHMRNCLIG 66
V+ L + +NVP+ ++ + Y+ P+ + + +DP + N D++ +
Sbjct: 79 CVMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVMNADTLSYCQKEAWCK 138
Query: 67 MGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLY MI +L+
Sbjct: 139 LAFYLLSFFYYLYCMIYTLV 158
>sp|Q6ZWS4|CNIH3_MOUSE Protein cornichon homolog 3 OS=Mus musculus GN=Cnih3 PE=2 SV=1
Length = 160
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 9 VLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPSGNMGV-FDPTELYNRDSIKNHMRNCLIG 66
++ L +L L +NVP+ ++ + Y+ P+ + + +DP + N D++ +
Sbjct: 79 CIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVMNADTLSYCQKEAWCK 138
Query: 67 MGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLY MI +L+
Sbjct: 139 LAFYLLSFFYYLYCMIYTLV 158
>sp|Q8TBE1|CNIH3_HUMAN Protein cornichon homolog 3 OS=Homo sapiens GN=CNIH3 PE=2 SV=1
Length = 160
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 9 VLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPSGNMGV-FDPTELYNRDSIKNHMRNCLIG 66
++ L +L L +NVP+ ++ + Y+ P+ + + +DP + N D++ +
Sbjct: 79 CIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDPPVVMNADTLSYCQKEAWCK 138
Query: 67 MGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLY MI +L+
Sbjct: 139 LAFYLLSFFYYLYCMIYTLV 158
>sp|Q5BJU5|CNIH2_RAT Protein cornichon homolog 2 OS=Rattus norvegicus GN=Cnih2 PE=1 SV=1
Length = 160
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 6 GVTVLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNC 63
G+ L+ L ++ L +N+P+ ++++ Y+ P+ G+ ++D + N D + +
Sbjct: 76 GLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKES 135
Query: 64 LIGMGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLYSM+ +L+
Sbjct: 136 WCKLAFYLLSFFYYLYSMVYTLV 158
>sp|O35089|CNIH2_MOUSE Protein cornichon homolog 2 OS=Mus musculus GN=Cnih2 PE=1 SV=2
Length = 160
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 6 GVTVLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNC 63
G+ L+ L ++ L +N+P+ ++++ Y+ P+ G+ ++D + N D + +
Sbjct: 76 GLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKES 135
Query: 64 LIGMGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLYSM+ +L+
Sbjct: 136 WCKLAFYLLSFFYYLYSMVYTLV 158
>sp|Q6PI25|CNIH2_HUMAN Protein cornichon homolog 2 OS=Homo sapiens GN=CNIH2 PE=1 SV=1
Length = 160
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 6 GVTVLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNC 63
G+ L+ L ++ L +N+P+ ++++ Y+ P+ G+ ++D + N D + +
Sbjct: 76 GLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKES 135
Query: 64 LIGMGFYLVIFFVYLYSMILSLL 86
+ FYL+ FF YLYSM+ +L+
Sbjct: 136 WCKLAFYLLSFFYYLYSMVYTLV 158
>sp|Q68EY2|CNIH2_XENLA rotein cornichon homolog 2 OS=Xenopus laevis GN=cnih2 PE=2 SV=1
Length = 162
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 6 GVTVLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNC 63
G+ L+ + ++ L +N+P+ ++++ Y+ P+ G+ +FDP + N D + +
Sbjct: 76 GLFCLMFMCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMFDPVSIMNVDILNYCQKEA 135
Query: 64 LIGMGFYLVIFFVYLYSM 81
+ FYL+ FF YLY +
Sbjct: 136 WCKLAFYLLSFFYYLYRV 153
>sp|Q0VFK3|CNIH2_XENTR Cornichon homolog 2 OS=Xenopus tropicalis GN=cnih2 PE=2 SV=1
Length = 162
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 6 GVTVLLLLTGHYYLFL-MNVPMSAWNVYEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNC 63
G+ L+ + ++ L +N+P+ ++++ Y+ P+ G+ +FDP + N D + +
Sbjct: 76 GLFCLMFMCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMFDPVSIMNVDILNYCQKEA 135
Query: 64 LIGMGFYLVIFFVYLYSM 81
+ FYL+ FF YLY +
Sbjct: 136 WCKLAFYLLSFFYYLYRV 153
>sp|Q401C0|CNIH2_CHICK Protein cornichon homolog 2 OS=Gallus gallus GN=CNIH2 PE=1 SV=1
Length = 160
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 32 YEYYSVPS-GNMGVFDPTELYNRDSIKNHMRNCLIGMGFYLVIFFVYLYSMILSLL 86
+ Y+ PS G+ G+FD + + D + + + FYL+ FF YLYSM+ +L+
Sbjct: 103 WRYFHRPSDGSEGLFDAVSIMDADILGYCQKEAWCKLAFYLLSFFYYLYSMVYTLV 158
>sp|Q9P6K6|ERV14_SCHPO ER-derived vesicles protein erv14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=erv14 PE=3 SV=2
Length = 137
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 44 VFDPTELYNRDSIKNHMRNCLIGMGFYLVIFFVYLYSMILSLLRDN 89
+ D TE++ + + H R+ I + FYL++FF LY M++SL+++
Sbjct: 94 ILDATEIFRQ--LGRHKRDNFIKVTFYLIMFFTLLYCMVMSLIQEE 137
>sp|P38312|ERV15_YEAST ER-derived vesicles protein ERV15 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV15 PE=1 SV=1
Length = 142
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 4 QVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNC 63
Q ++ L L G++++FL+NVP+ A+N + Y + D T+++ + + C
Sbjct: 58 QAFISALFLFNGYWFVFLLNVPVLAYNASKVYK----KTHLLDATDIFRK--LGRCKIEC 111
Query: 64 LIGMGFYLVIFFVYLYSMILSLLRDNP 90
+ +GFYL+IFF Y Y M+ +LL ++
Sbjct: 112 FLKLGFYLLIFFFYFYRMVTALLENDA 138
>sp|Q9C7D7|CNIH1_ARATH Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180
PE=2 SV=1
Length = 146
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 4 QVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNC 63
Q + +L LLT H+ FL+ VP++ ++ Y + D TE++ S + +R
Sbjct: 57 QGSLCLLFLLTWHWVFFLVAVPVTVYHAMLY----KERRYLIDVTEVFRGISFEKKLRYT 112
Query: 64 LIGMGFYLVIFFVYLYSMILS 84
+GFY+ +F + ++ + LS
Sbjct: 113 --KLGFYVFLFIMVVFRLTLS 131
>sp|Q3EDD7|CNIH2_ARATH Probable protein cornichon homolog 2 OS=Arabidopsis thaliana
GN=At1g12340 PE=2 SV=2
Length = 129
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 3 AQVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRN 62
Q + V LLTGH+++ L+ +P +N + Y S + D TE++N + + R
Sbjct: 47 VQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLY----SKRQHLVDVTEIFNLLNWEKKKR- 101
Query: 63 CLIGMGFYLVIFFVYLYSMILSLLRD 88
L + + ++ F+ ++ MI S L D
Sbjct: 102 -LFKLAYIVLNLFLTIFWMIYSALDD 126
>sp|Q8GWT5|CNIH3_ARATH Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880
PE=2 SV=1
Length = 137
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 4 QVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRNC 63
Q + V L+TGH+++ L+ VP +N + Y S + D TE++N + R
Sbjct: 56 QGFLCVFYLVTGHWFMALLCVPYLYYNFHLY----SRKQHLIDVTEIFNLLDWEKKKR-- 109
Query: 64 LIGMGFYLVIFFVYLYSMILSLLRD 88
L + + ++ F+ ++ +I S L D
Sbjct: 110 LFKLAYIILTLFLTIFWLIYSTLDD 134
>sp|Q84W04|CNIH4_ARATH Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390
PE=1 SV=1
Length = 137
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 3 AQVGVTVLLLLTGHYYLFLMNVPMSAWNVYEYYSVPSGNMGVFDPTELYNRDSIKNHMRN 62
Q + V LLTGH+++ L+ +P +N + Y S + D TE++N + + R
Sbjct: 55 VQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLY----SKRQHLVDVTEIFNLLNWEKKKR- 109
Query: 63 CLIGMGFYLVIFFVYLYSMILSLLRD 88
L + + ++ F+ ++ MI S L D
Sbjct: 110 -LFKLAYIVLNLFLTIFWMIYSALDD 134
>sp|O14038|YEY5_SCHPO Uncharacterized protein C2C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2C4.05 PE=3 SV=1
Length = 134
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 1 MGAQVGVTVLLLLTGHYYLFLMNVPMSAWNV 31
MG Q +LLLL+G + FL+NVPM AWN
Sbjct: 53 MGFQAFSALLLLLSGAWITFLLNVPMLAWNA 83
>sp|P56192|SYMC_HUMAN Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=MARS PE=1
SV=2
Length = 900
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 24 VPMSAWNVYEYYSVPSGNMGVFDPTELY--NRDSIKNHMRNCLIGMGFYLVIFF-VYLYS 80
+P W Y Y P G F T+L N + N++ N + G ++ FF Y+
Sbjct: 612 IPADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPE 671
Query: 81 MILS 84
M+L+
Sbjct: 672 MVLT 675
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,204,856
Number of Sequences: 539616
Number of extensions: 1542616
Number of successful extensions: 3832
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3800
Number of HSP's gapped (non-prelim): 35
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)