BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3565
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99LW6|YAF2_MOUSE YY1-associated factor 2 OS=Mus musculus GN=Yaf2 PE=1 SV=1
Length = 179
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVA- 63
D+K+PT KR+ K A DE YWDCSVCT+RN AEAFKC MCDVRKGTSTRKPR LVA
Sbjct: 3 DKKSPTRPKRQPKPASDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRKPRPVSQLVAQ 62
Query: 64 QVTQQYPVPATSKVGPKKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVN 123
QVTQQ+ VP T KK+ K+KSE K K P+LK+VDR++AQ LE+TV
Sbjct: 63 QVTQQF-VPPTQSKKEKKDRVEKDKSEKEAASKKNCHKKTRPRLKNVDRSSAQHLEVTVG 121
Query: 124 NLTVKVTEFK 133
+LTV +T+FK
Sbjct: 122 DLTVIITDFK 131
>sp|Q8IY57|YAF2_HUMAN YY1-associated factor 2 OS=Homo sapiens GN=YAF2 PE=1 SV=3
Length = 180
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVA- 63
D+K+PT KR+ K + DE YWDCSVCT+RN AEAFKC MCDVRKGTSTRKPR LVA
Sbjct: 3 DKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRKPRPVSQLVAQ 62
Query: 64 QVTQQYPVPATSKVGPKKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVN 123
QVTQQ+ VP T KK+ KEKSE K K P+LK+VDR++AQ LE+TV
Sbjct: 63 QVTQQF-VPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHLEVTVG 121
Query: 124 NLTVKVTEFKPKIKKSILDSDLSSVENDSQSESSLNTKNG 163
+LTV +T+FK K K S S+ ++ SS NT+ G
Sbjct: 122 DLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERG 161
>sp|Q8N488|RYBP_HUMAN RING1 and YY1-binding protein OS=Homo sapiens GN=RYBP PE=1 SV=2
Length = 228
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRI 57
D+K+PT KR+ K A DE +WDCSVCT+RN AEAFKCS+CDVRKGTSTRKPRI
Sbjct: 5 DKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSICDVRKGTSTRKPRI 57
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 105 PKLKHVDRTTAQTLEITVNNLTVKVTEFKPK 135
P+LK+VDR+TAQ L +TV N+TV +T+FK K
Sbjct: 146 PRLKNVDRSTAQQLAVTVGNVTVIITDFKEK 176
>sp|Q8CCI5|RYBP_MOUSE RING1 and YY1-binding protein OS=Mus musculus GN=Rybp PE=1 SV=1
Length = 228
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRI 57
D+K+PT KR+ K A DE +WDCSVCT+RN AEAFKCS+CDVRKGTSTRKPRI
Sbjct: 5 DKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSICDVRKGTSTRKPRI 57
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 105 PKLKHVDRTTAQTLEITVNNLTVKVTEFKPK 135
P+LK+VDR+TAQ L +TV N+TV +T+FK K
Sbjct: 146 PRLKNVDRSTAQQLAVTVGNVTVIITDFKEK 176
>sp|Q5EG55|RYBPB_DANRE RING1 and YY1-binding protein B OS=Danio rerio GN=rybpb PE=2 SV=1
Length = 257
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRI 57
D+K+PT KR+ K D +WDCSVCT+RN AEAFKCS+CDVRKGTSTRKPRI
Sbjct: 3 DKKSPTRPKRQAKPTADNGFWDCSVCTFRNSAEAFKCSICDVRKGTSTRKPRI 55
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 105 PKLKHVDRTTAQTLEITVNNLTVKVTEFKPK 135
PKLK++DR+TAQ L ITV N+TV +T+FK K
Sbjct: 176 PKLKNIDRSTAQQLAITVGNVTVIITDFKEK 206
>sp|Q7SYB3|RYBPA_DANRE RING1 and YY1-binding protein A OS=Danio rerio GN=rybpa PE=2 SV=1
Length = 385
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 7 DRKTPT--KRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRI 57
D+K+P+ KR+ K + D +WDCSVCT++N AEAFKCS+CDVRKGTSTRKPRI
Sbjct: 3 DKKSPSRPKRQAKPSADNGFWDCSVCTFKNSAEAFKCSICDVRKGTSTRKPRI 55
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 105 PKLKHVDRTTAQTLEITVNNLTVKVTEFKPK 135
PKLK+VDR++AQ L ITV N+TV +T+FK K
Sbjct: 304 PKLKNVDRSSAQQLAITVGNVTVIITDFKEK 334
>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1
Length = 708
Score = 38.1 bits (87), Expect = 0.027, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CSVCTY N A+A KC +CD
Sbjct: 143 RNKLNTRTQHWTCSVCTYENWAKAKKCVVCD 173
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 11 PTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYP 70
P + ++ N W C +CTY N A +C+ C ++ TR P +P Q +
Sbjct: 74 PRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQR--RTRSPTESP----QSSGSGS 127
Query: 71 VPATSKVGPKKEGGGKEKSENR 92
P V P +E + K R
Sbjct: 128 RPVAFSVDPCEEYNDRNKLNTR 149
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTST 52
W C CTY N A KC+MC ++ + T
Sbjct: 8 WACEYCTYENWPSAIKCTMCRAQRPSGT 35
>sp|A6QP16|ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1 OS=Bos taurus GN=ZRANB1 PE=2 SV=1
Length = 708
Score = 37.7 bits (86), Expect = 0.038, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CS+CTY N A+A KC +CD
Sbjct: 143 RNKLNTRTQHWTCSICTYENWAKAKKCVVCD 173
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 11 PTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYP 70
P + ++ N W C +CTY N A +C+ C ++ TR P +P Q +
Sbjct: 74 PRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQR--RTRSPTESP----QSSGSGS 127
Query: 71 VPATSKVGPKKEGGGKEKSENR 92
P V P +E + K R
Sbjct: 128 RPVAFSVDPCEEYNDRNKLNTR 149
Score = 33.9 bits (76), Expect = 0.46, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTST 52
W C CTY N A KC+MC ++ + T
Sbjct: 8 WACEYCTYENWPSAIKCTMCRAQRPSGT 35
>sp|A0JMQ9|ZRN1B_DANRE Ubiquitin thioesterase zranb1-B OS=Danio rerio GN=zranb1b PE=2 SV=1
Length = 716
Score = 37.4 bits (85), Expect = 0.047, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 12 TKRRRKQAKDE-----NYWDCSVCTYRNVAEAFKCSMC-DVRKGTSTRKPRITPDLVAQV 65
+ R R + DE + W C +CTY N A +C+ C R+ S + ++P Q
Sbjct: 68 SARPRVRIADELPETSSKWSCHMCTYLNWPRAIRCTQCLSQRQQGSQQHSPLSPSETPQT 127
Query: 66 TQQYPVPATS 75
+ P P TS
Sbjct: 128 SGSRPSPVTS 137
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVPATSKVG 78
W C CTY N A KC+MC ++ + P IT + + P T++ G
Sbjct: 8 WSCEYCTYENWPSAIKCTMCRAQRHNA---PIITEEPFKSSSSLDPSLCTTQGG 58
Score = 33.5 bits (75), Expect = 0.72, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVPATSKVGPKKEGG 84
W CS CTY N ++ +C +CD KP +P+ Q ++ + S V ++
Sbjct: 156 WPCSACTYENWPKSLRCVVCD------HPKPSGSPETPQQDSEAESATSPSIVNEQEREN 209
Query: 85 GKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVNNLTVKVTEFKP------KIKK 138
+ + RK +PP K + V + + +FK ++++
Sbjct: 210 VRTAGGGGGGSRGRLRKLSPPMCKGQAEVKIELASGAVGSDNEQEADFKKLKQIRNRMRR 269
Query: 139 S---ILDSDLSSVENDSQSESSLNTKNGDI 165
S L++ VE D + + + GDI
Sbjct: 270 SDWLFLNACAGVVEGDLAAVEAYKSSGGDI 299
>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2
Length = 708
Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CSVCTY N A+A +C +CD
Sbjct: 143 RNKLNTRTQHWTCSVCTYENWAKAKRCVVCD 173
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 11 PTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYP 70
P + ++ N W C +CTY N A +C+ C ++ TR P +P Q +
Sbjct: 74 PRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQR--RTRSPTESP----QSSGSGS 127
Query: 71 VPATSKVGPKKEGGGKEKSENR 92
P V P +E + K R
Sbjct: 128 RPVAFSVDPCEEYNDRNKLNTR 149
Score = 33.9 bits (76), Expect = 0.46, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTST 52
W C CTY N A KC+MC ++ + T
Sbjct: 8 WACEYCTYENWPSAIKCTMCRAQRPSGT 35
>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2
SV=1
Length = 701
Score = 36.6 bits (83), Expect = 0.082, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CS CTY N A+A KC +CD
Sbjct: 138 RNKLNIKGQHWTCSACTYENCAKAKKCVVCD 168
Score = 34.3 bits (77), Expect = 0.38, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVP 72
W C +CTY N A +C+ C ++ TR P +P + P P
Sbjct: 83 WSCQICTYLNWPRAIRCTQCLSQR--RTRSPTESPQSSGSGLRSIPSP 128
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 25 WDCSVCTYRNVAEAFKCSMC 44
W C CTY N A KC+MC
Sbjct: 8 WGCEYCTYENWPSAIKCTMC 27
>sp|B1H2Q2|ZRAN1_XENTR Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis GN=zranb1 PE=2
SV=1
Length = 701
Score = 36.6 bits (83), Expect = 0.082, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CS CTY N A+A KC +CD
Sbjct: 138 RNKLNIKGQHWTCSACTYENCAKAKKCVVCD 168
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVP 72
W C +CTY N A +C+ C ++ TR P +P + P P
Sbjct: 83 WSCHMCTYLNWPRAIRCTQCLSQR--RTRSPTESPQSSGSSLRAIPSP 128
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 25 WDCSVCTYRNVAEAFKCSMC 44
W C CTY N A KC+MC
Sbjct: 8 WACEYCTYENWPSAIKCTMC 27
>sp|Q6NUB7|ZRN1B_XENLA Ubiquitin thioesterase zranb1-B OS=Xenopus laevis GN=zranb1-b PE=2
SV=1
Length = 701
Score = 36.6 bits (83), Expect = 0.086, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R K +W CS CTY N A+A KC +CD
Sbjct: 138 RNKLNIKGQHWTCSACTYENCAKAKKCVVCD 168
Score = 33.5 bits (75), Expect = 0.61, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 11 PTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYP 70
P + + + W C +CTY N A +C+ C ++ TR P +P + P
Sbjct: 69 PRVKSSYSMETSSKWSCQICTYLNWPRAIRCTQCLSQR--RTRSPTESPQSSGSGLRSIP 126
Query: 71 VP 72
P
Sbjct: 127 GP 128
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 25 WDCSVCTYRNVAEAFKCSMC 44
W C CT+ N A KC+MC
Sbjct: 8 WACEYCTFENWPSAIKCTMC 27
>sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2
Length = 3224
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMC 44
K E WDCSVC RN A A KC C
Sbjct: 1605 KKEGQWDCSVCLVRNEASATKCIAC 1629
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMC 44
K E WDCSVC RN A A KC C
Sbjct: 1664 KKEGQWDCSVCLVRNEASATKCIAC 1688
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMC 44
K E WDCSVC RN A A KC C
Sbjct: 1723 KKEGQWDCSVCLVRNEASATKCIAC 1747
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGT 50
WDCSVC +N + + KC CD K T
Sbjct: 1785 WDCSVCCVQNESSSLKCVACDASKPT 1810
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%)
Query: 19 AKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVPATSKVG 78
AK E WDCS C RN A A +C C PD + T P PA+ K G
Sbjct: 1541 AKKEGQWDCSSCLVRNEANATRCVACQ------------NPDKPSPST-SVPAPASFKFG 1587
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMC 44
K E +WDCS+C RN +C C
Sbjct: 1414 KKEGHWDCSICLVRNEPTVSRCIAC 1438
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 22 ENYWDCSVCTYRNVAEAFKCSMC 44
E WDCS C +N + KC+ C
Sbjct: 1480 EGQWDCSACLVQNEGSSTKCAAC 1502
>sp|Q9VH90|TRBID_DROME Ubiquitin thioesterase trabid OS=Drosophila melanogaster GN=trbd
PE=1 SV=1
Length = 778
Score = 35.8 bits (81), Expect = 0.14, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 21 DENYWDCSVCTYRNVAEAFKCSMCDVRK 48
D W C CTY N + KC+MC K
Sbjct: 7 DAQKWKCETCTYENYPSSLKCTMCQASK 34
Score = 35.0 bits (79), Expect = 0.25, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 12 TKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKG 49
++ R+ D W C VCTY N + +C C ++G
Sbjct: 80 SQARQSNVADSEKWPCKVCTYLNWPRSLRCVQCCTKRG 117
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 25 WDCSVCTYRNVAEAFKCSMC 44
W C+ CTY N + KCSMC
Sbjct: 236 WACNSCTYENWPRSIKCSMC 255
>sp|Q5FWF4|ZRAB3_HUMAN DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens
GN=ZRANB3 PE=1 SV=2
Length = 1079
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRK 54
W CS+CTY N +E C MC+ +G++ +
Sbjct: 625 WQCSLCTYINNSELPYCEMCETPQGSAVMQ 654
>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=2
Length = 3053
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITP 59
K E W+C+VC+ +N + + KC C+ K T KP P
Sbjct: 1616 KKEGEWECAVCSVQNESSSLKCVACEASK--PTHKPHEAP 1653
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 19 AKDENYWDCSVCTYRNVAEAFKCSMC 44
AK E WDCS+C RN A A C C
Sbjct: 1556 AKKEGQWDCSLCFVRNEASATHCIAC 1581
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLV 62
K+ YW+C+ C+++N A A KC C TS ++ + P LV
Sbjct: 1345 KEGPYWNCNSCSFKNAATAKKCVSCQNTNPTSNKE-LLGPPLV 1386
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 19 AKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTST 52
A E +WDCSVC RN +C C K S+
Sbjct: 1408 ANKEGHWDCSVCLVRNEPTVSRCIACQNTKSASS 1441
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 25 WDCSVCTYRNVAEAFKCSMCD--VRKGTSTRKPRI 57
W CS+C+ +N A A KC C+ V ST P
Sbjct: 1502 WHCSLCSVKNEAHAIKCVACNNPVTPSLSTAPPSF 1536
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 15 RRKQAKDENYWDCSVCTYRNVAEAFKCSMCD 45
R +K E W+CSVC RN A KC C+
Sbjct: 1463 RSVFSKKEGQWECSVCLVRNERSAKKCVACE 1493
>sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1
Length = 1095
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 21 DENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQVTQQYPVPATSKVGPK 80
+E W C+ CT+RN C +C T +P L+ + P P T V PK
Sbjct: 44 EEQKWPCARCTFRNFLGKEACEVCGF-----TPEPVPGAPLLPIINGVLPKPPTILVEPK 98
Query: 81 KEGGGKEKS 89
G GKE++
Sbjct: 99 --GSGKEEA 105
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 8/37 (21%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDL 61
W C+ CT+ N A +CS+C+ PR PDL
Sbjct: 7 WSCARCTFLNPAGQRQCSICEA--------PRHKPDL 35
Score = 30.4 bits (67), Expect = 5.9, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDL-----VAQVTQQYPVPATSKVGP 79
W C CT N A CS C + S PRI P+ V T + VPA S+ P
Sbjct: 153 WACQRCTLHNTPVASSCSACGGPRKLSL--PRIPPEALVVPEVVAPTGFHVVPAPSQ--P 208
Query: 80 KKEGGGKEKSENRKFKKHGRRKWNPPKL 107
G G E + PP++
Sbjct: 209 VLPGEGAEADSPSTSQGPTSTDQEPPRV 236
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 8 RKTPTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMC 44
R TP + D W C+ CT RN A +CS+C
Sbjct: 340 RYTPAS---PSSPDFTTWSCARCTLRNPTTAPRCSVC 373
>sp|P49791|NU153_RAT Nuclear pore complex protein Nup153 OS=Rattus norvegicus GN=Nup153
PE=1 SV=1
Length = 1468
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMCDVRK 48
K E WDC VC +N A++ KC C+ K
Sbjct: 845 KPEGSWDCEVCLVQNKADSTKCIACESAK 873
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRK-GTSTRKPRITPDLVA 63
WDC C +N EA KC C+ K GT + R P VA
Sbjct: 725 WDCDTCLVQNKPEAVKCVACETPKPGTGVK--RALPLTVA 762
>sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1
SV=2
Length = 1475
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 20 KDENYWDCSVCTYRNVAEAFKCSMCDVRK 48
K E WDC +C +N A++ KC C+ K
Sbjct: 850 KPEGSWDCELCLVQNKADSTKCLACESAK 878
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQ 64
WDC C +N EA KC C+ K + K +T +V++
Sbjct: 726 WDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSE 765
>sp|P58949|LEUC_XANCP 3-isopropylmalate dehydratase large subunit OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=leuC PE=3 SV=1
Length = 479
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 25 WDCSVCTYRNV---AEAFKCSMCDVRKGTSTRKPRIT----PDLVAQVTQQYPVPATSKV 77
WD +V +R + A+A ++ ++R KP+++ P++V + QQ P PA +
Sbjct: 261 WDAAVALWRTLVSDADASFDTVVELR--AEDIKPQVSWGTSPEMVVAIDQQVPDPAAEQD 318
Query: 78 GPKKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRT 113
K++ S R K G R P H+DR
Sbjct: 319 PTKRD------SIQRALKYMGLRANQPITEIHLDRV 348
>sp|Q4UYG5|LEUC_XANC8 3-isopropylmalate dehydratase large subunit OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=leuC PE=3
SV=1
Length = 479
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 25 WDCSVCTYRNV---AEAFKCSMCDVRKGTSTRKPRIT----PDLVAQVTQQYPVPATSKV 77
WD +V +R + A+A ++ ++R KP+++ P++V + QQ P PA +
Sbjct: 261 WDAAVALWRTLVSDADASFDTVVELR--AEDIKPQVSWGTSPEMVVAIDQQVPDPAAEQD 318
Query: 78 GPKKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRT 113
K++ S R K G R P H+DR
Sbjct: 319 PTKRD------SIQRALKYMGLRANQPITEIHLDRV 348
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 8 RKTPTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRITPDLVAQ 64
++TP KRRR++A N CS C R + C C S +P +TP+ + +
Sbjct: 101 QQTPVKRRRRKATIRNVDYCSACGGRGL--FICCEGCPCSFHLSCLEPPLTPENIPE 155
>sp|P27398|CAND_DROME Calpain-D OS=Drosophila melanogaster GN=sol PE=1 SV=2
Length = 1594
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTST 52
W C CTY N A + C +C +G ++
Sbjct: 931 WQCPACTYDNCAASVVCDICSSPRGLAS 958
>sp|Q8N5C8|TAB3_HUMAN TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 OS=Homo
sapiens GN=TAB3 PE=1 SV=2
Length = 712
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 8 RKTPTKRRRKQAKDENY----WDCSVCTYRNVAEAFKCSMCDVRKGT 50
R T+ R Q +DE+Y W+C CT+ N +C C++ + T
Sbjct: 666 RTGSTQSPRTQPRDEDYEGAPWNCDSCTFLNHPALNRCEQCEMPRYT 712
>sp|Q9H582|ZN644_HUMAN Zinc finger protein 644 OS=Homo sapiens GN=ZNF644 PE=1 SV=2
Length = 1327
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 9 KTPTKRRRKQAKDENYWDCSVCTYRNVAE-AFKCSMCDVRKGTSTRKPRITPDLVAQVTQ 67
KT + + KD+ Y+ C C + V E +C + G + P +T D+ + TQ
Sbjct: 509 KTFVQHAKTHEKDKRYYCCEECNFMAVTENELECHR-GIAHGAVVKCPMVTSDIAQRKTQ 567
Query: 68 QYPVPATSKVGPKKEGG 84
+ S VG K+
Sbjct: 568 KKTFMKDSVVGSSKKSA 584
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 10/40 (25%)
Query: 25 WDCSVCTYRNVAEAFKCSMCDVRKGTSTRKPRIT--PDLV 62
W C CT+ N A A CS+C+ +PR+ P LV
Sbjct: 354 WACQSCTFENEAAAVLCSICE--------RPRLAQPPSLV 385
>sp|A4GYX2|NDHH_POPTR NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Populus
trichocarpa GN=ndhH PE=3 SV=1
Length = 393
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 83 GGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVNNLTVKV 129
GG E E R F + R+WN + + + + T+ E+ L V+V
Sbjct: 284 GGPYENLETRSFDRERNREWNDFEYRFISKKTSPAFELPKQELYVRV 330
>sp|Q14FA2|NDHH_POPAL NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Populus
alba GN=ndhH PE=3 SV=1
Length = 393
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 83 GGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVNNLTVKV 129
GG E E R F + R+WN + + + + T+ E+ L V+V
Sbjct: 284 GGPYENLETRSFDRERNREWNDFEYRFISKKTSPAFELPKQELYVRV 330
>sp|O75808|CAN15_HUMAN Calpain-15 OS=Homo sapiens GN=SOLH PE=2 SV=1
Length = 1086
Score = 29.6 bits (65), Expect = 8.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 8 RKTPTKRRRKQAKDENYWDCSVCTYRNVAEAFKCSMCDVRK 48
R TP + D W C+ CT RN A +CS C K
Sbjct: 330 RYTPAS---PSSPDFTTWSCAKCTLRNPTVAPRCSACGCSK 367
>sp|O98691|NDHH_HORVU NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Hordeum
vulgare GN=ndhH PE=3 SV=1
Length = 393
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 80 KKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVNNLTVKVTEFKPKIKKS 139
K GG E E R+FKK +WN + K + + + E++ L V+V K ++
Sbjct: 281 KIPGGPYENLEVRRFKKEKNSEWNDFEYKFLGKKPSPNFELSRQELYVRVEAPKGELGIY 340
Query: 140 ILDSD 144
++ D
Sbjct: 341 LVGDD 345
>sp|Q95H42|NDHH_WHEAT NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Triticum
aestivum GN=ndhH PE=3 SV=1
Length = 393
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 80 KKEGGGKEKSENRKFKKHGRRKWNPPKLKHVDRTTAQTLEITVNNLTVKVTEFKPKIKKS 139
K GG E E R+FKK +WN + K + + + E++ L V+V K ++
Sbjct: 281 KIPGGPYENLEVRRFKKEKNSEWNDFEYKFLGKKPSPNFELSRQELYVRVEAPKGELGIY 340
Query: 140 ILDSD 144
++ D
Sbjct: 341 LVGDD 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,723,327
Number of Sequences: 539616
Number of extensions: 2337175
Number of successful extensions: 6261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 6151
Number of HSP's gapped (non-prelim): 150
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)