Your job contains 1 sequence.
>psy3566
MKFNAFSSVSDSGSKTTNLFEPDYLDHLNPEIPLYDEVNVQLKGYDFPVLESYQKFVYKI
AASLSIQSDESWALPPQKFNITRMEPNSSVVDANYHLRIYERNVQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3566
(105 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031357 - symbol:mRpL48 "mitochondrial ribosomal p... 261 1.6e-22 1
WB|WBGene00016989 - symbol:CD4.3 species:6239 "Caenorhabd... 128 2.0e-08 1
UNIPROTKB|B4DN34 - symbol:MRPL48 "39S ribosomal protein L... 114 7.2e-07 1
UNIPROTKB|E1C598 - symbol:MRPL48 "Uncharacterized protein... 115 7.6e-07 1
RGD|1307576 - symbol:Mrpl48 "mitochondrial ribosomal prot... 114 1.0e-06 1
UNIPROTKB|Q96GC5 - symbol:MRPL48 "39S ribosomal protein L... 114 1.0e-06 1
MGI|MGI:1289321 - symbol:Mrpl48 "mitochondrial ribosomal ... 112 1.8e-06 1
UNIPROTKB|F1PWD1 - symbol:F1PWD1 "Uncharacterized protein... 109 2.1e-06 1
UNIPROTKB|J9P5B3 - symbol:J9P5B3 "Uncharacterized protein... 109 3.2e-06 1
ZFIN|ZDB-GENE-041008-125 - symbol:mrpl48 "mitochondrial r... 107 6.2e-06 1
UNIPROTKB|Q2YDI5 - symbol:MRPL48 "39S ribosomal protein L... 105 1.1e-05 1
UNIPROTKB|F1SUS9 - symbol:MRPL48 "Uncharacterized protein... 105 1.2e-05 1
UNIPROTKB|F5H702 - symbol:MRPL48 "39S ribosomal protein L... 85 0.00072 1
>FB|FBgn0031357 [details] [associations]
symbol:mRpL48 "mitochondrial ribosomal protein L48"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 EMBL:AE014134
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 CTD:51642
eggNOG:NOG250119 GeneTree:ENSGT00390000012955 Gene3D:3.30.70.600
SUPFAM:SSF54999 OMA:YEPDYLE EMBL:AY069759 RefSeq:NP_608613.1
UniGene:Dm.19765 STRING:Q9VQ35 EnsemblMetazoa:FBtr0077882
EnsemblMetazoa:FBtr0333542 GeneID:33348 KEGG:dme:Dmel_CG17642
UCSC:CG17642-RA FlyBase:FBgn0031357 InParanoid:Q9VQ35
OrthoDB:EOG4C2FSR GenomeRNAi:33348 NextBio:783134 Uniprot:Q9VQ35
Length = 181
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 44/92 (47%), Positives = 68/92 (73%)
Query: 14 SKTTNLFEPDYLDHLNPEIPLYDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWA 73
S + +++EPDYL+ L P+ P Y+ +NVQ+KGYD+P LESYQ+F++ +A L + + +A
Sbjct: 25 STSGSVYEPDYLESLKPKFPQYESLNVQIKGYDYPQLESYQRFLHGLAEYLDLDVSDCYA 84
Query: 74 LPPQKFNITRMEPNSSVVDANYHLRIYERNVQ 105
LPPQK + R+ PNS+V+++ Y L YERN+Q
Sbjct: 85 LPPQKTTVQRLRPNSTVIESEYKLTTYERNLQ 116
>WB|WBGene00016989 [details] [associations]
symbol:CD4.3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001848 Pfam:PF00338
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:FO080609 eggNOG:NOG250119 GeneTree:ENSGT00390000012955
Gene3D:3.30.70.600 SUPFAM:SSF54999 PIR:T32528 RefSeq:NP_504475.1
ProteinModelPortal:O44159 SMR:O44159 PaxDb:O44159
EnsemblMetazoa:CD4.3.1 EnsemblMetazoa:CD4.3.2
EnsemblMetazoa:CD4.3.3 GeneID:259341 KEGG:cel:CELE_CD4.3
UCSC:CD4.3.1 CTD:259341 WormBase:CD4.3 HOGENOM:HOG000018978
InParanoid:O44159 OMA:YEPDYLE NextBio:951666 Uniprot:O44159
Length = 186
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 19 LFEPDYLDHLNPEIPLYDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQK 78
L+EP + D + E P Y+ +NV+++G+DF LE YQ +++K A +S+A+ Q
Sbjct: 34 LYEPKFQD--SREFPEYNTINVRIQGHDFGSLEKYQAYIHKTAKRFGFTVVDSYAVAAQT 91
Query: 79 FNITRMEPNSSVVDANYHLRIYERNVQ 105
+P S+V ++ + Y+R V+
Sbjct: 92 QKAITYKPYSTVSESEIDMSTYDRVVR 118
>UNIPROTKB|B4DN34 [details] [associations]
symbol:MRPL48 "39S ribosomal protein L48, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AP002770 HOGENOM:HOG000070027 HOVERGEN:HBG055302
Gene3D:3.30.70.600 SUPFAM:SSF54999 UniGene:Hs.503239
HGNC:HGNC:16653 ChiTaRS:MRPL48 EMBL:AK297746 IPI:IPI00807664
SMR:B4DN34 Ensembl:ENST00000535529 UCSC:uc010rri.2 Uniprot:B4DN34
Length = 194
Score = 114 (45.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + SLSI+ +ES+A+P + + +++ S + +
Sbjct: 70 YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 129
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 130 SVLTTHERVVQ 140
>UNIPROTKB|E1C598 [details] [associations]
symbol:MRPL48 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 CTD:51642
GeneTree:ENSGT00390000012955 OMA:VHNLCNH Gene3D:3.30.70.600
SUPFAM:SSF54999 EMBL:AADN02055116 IPI:IPI00651186
RefSeq:NP_001025224.1 UniGene:Gga.7866 Ensembl:ENSGALT00000027989
GeneID:419062 KEGG:gga:419062 NextBio:20822173 Uniprot:E1C598
Length = 209
Score = 115 (45.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 22/71 (30%), Positives = 43/71 (60%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y ++N+Q+ YD ++E + ++V+K+ LSI+ +ES+A+P + + ME S + +
Sbjct: 85 YGDINIQMTSYDMCLVEHFAQYVHKLCNQLSIRVNESYAMPTKTNEVLFMEERGSKMQVD 144
Query: 95 YHLRIYERNVQ 105
L ++R VQ
Sbjct: 145 AVLTTHQRVVQ 155
>RGD|1307576 [details] [associations]
symbol:Mrpl48 "mitochondrial ribosomal protein L48"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 RGD:1307576
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC145474
Gene3D:3.30.70.600 SUPFAM:SSF54999 IPI:IPI00373488
Ensembl:ENSRNOT00000027806 UCSC:RGD:1307576 ArrayExpress:F1LWB8
Uniprot:F1LWB8
Length = 211
Score = 114 (45.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRM--EPNSSVVD 92
Y +N+ L YD + ESY ++V+++ LSI+ +ES+A+P + + R+ + N V+D
Sbjct: 87 YGVLNIHLTAYDMTLAESYARYVHRLCNQLSIKVEESYAMPTKTMEVMRLPDQGNKMVLD 146
Query: 93 ANYHLRIYERNVQ 105
+ L +ER VQ
Sbjct: 147 SV--LTTHERVVQ 157
>UNIPROTKB|Q96GC5 [details] [associations]
symbol:MRPL48 "39S ribosomal protein L48, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005761
"mitochondrial ribosome" evidence=IDA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 CTD:51642
eggNOG:NOG250119 HOGENOM:HOG000070027 HOVERGEN:HBG055302
OMA:VHNLCNH OrthoDB:EOG4H4652 Gene3D:3.30.70.600 SUPFAM:SSF54999
EMBL:AF151876 EMBL:AF161408 EMBL:BC009764 IPI:IPI00295066
RefSeq:NP_057139.1 UniGene:Hs.503239 ProteinModelPortal:Q96GC5
SMR:Q96GC5 IntAct:Q96GC5 PhosphoSite:Q96GC5 DMDM:118573683
PaxDb:Q96GC5 PRIDE:Q96GC5 DNASU:51642 Ensembl:ENST00000310614
GeneID:51642 KEGG:hsa:51642 UCSC:uc001ouh.4 GeneCards:GC11P073498
HGNC:HGNC:16653 MIM:611853 neXtProt:NX_Q96GC5 PharmGKB:PA30980
InParanoid:Q96GC5 ChiTaRS:MRPL48 GenomeRNAi:51642 NextBio:55580
ArrayExpress:Q96GC5 Bgee:Q96GC5 CleanEx:HS_MRPL48
Genevestigator:Q96GC5 GermOnline:ENSG00000175581 Uniprot:Q96GC5
Length = 212
Score = 114 (45.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + SLSI+ +ES+A+P + + +++ S + +
Sbjct: 88 YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 148 SVLTTHERVVQ 158
>MGI|MGI:1289321 [details] [associations]
symbol:Mrpl48 "mitochondrial ribosomal protein L48"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005761 "mitochondrial ribosome"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001848 Pfam:PF00338 MGI:MGI:1289321 GO:GO:0006412
GO:GO:0003735 GO:GO:0005761 CTD:51642 eggNOG:NOG250119
HOGENOM:HOG000070027 HOVERGEN:HBG055302 OrthoDB:EOG4H4652
Gene3D:3.30.70.600 SUPFAM:SSF54999 ChiTaRS:MRPL48 EMBL:AK171917
EMBL:BC037190 EMBL:BC096562 IPI:IPI00274131 RefSeq:NP_942128.2
UniGene:Mm.473730 ProteinModelPortal:Q8JZS9 SMR:Q8JZS9
PhosphoSite:Q8JZS9 PaxDb:Q8JZS9 PRIDE:Q8JZS9 GeneID:52443
KEGG:mmu:52443 UCSC:uc009ing.1 InParanoid:Q8JZS9 NextBio:308960
CleanEx:MM_MRPL48 Genevestigator:Q8JZS9
GermOnline:ENSMUSG00000030706 Uniprot:Q8JZS9
Length = 211
Score = 112 (44.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRM--EPNSSVVD 92
Y +N+ L YD + ESY ++V+++ LSI+ +ES+A+P + + R+ + N V+D
Sbjct: 87 YGVLNIHLTAYDMSLAESYAQYVHRLCNRLSIKVEESYAMPTKTMEVMRLPDQGNKMVLD 146
Query: 93 ANYHLRIYERNVQ 105
+ L +ER VQ
Sbjct: 147 SV--LTTHERVVQ 157
>UNIPROTKB|F1PWD1 [details] [associations]
symbol:F1PWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000012955 OMA:VHNLCNH Gene3D:3.30.70.600
SUPFAM:SSF54999 EMBL:AAEX03012811 EMBL:AAEX03012812
Ensembl:ENSCAFT00000008996 Uniprot:F1PWD1
Length = 176
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + LSI+ +ES+A+P + + R++ + + +
Sbjct: 52 YGVLNIHLTAYDMALAESYAQYVHHLCNHLSIKVEESYAMPTKTMEVLRLQDQGNKMLLD 111
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 112 SVLTTHERVVQ 122
>UNIPROTKB|J9P5B3 [details] [associations]
symbol:J9P5B3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000012955 SUPFAM:SSF54999 EMBL:AAEX03012811
EMBL:AAEX03012812 Ensembl:ENSCAFT00000044861 Uniprot:J9P5B3
Length = 200
Score = 109 (43.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + LSI+ +ES+A+P + + R++ + + +
Sbjct: 88 YGVLNIHLTAYDMALAESYAQYVHHLCNHLSIKVEESYAMPTKTMEVLRLQDQGNKMLLD 147
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 148 SVLTTHERVVQ 158
>ZFIN|ZDB-GENE-041008-125 [details] [associations]
symbol:mrpl48 "mitochondrial ribosomal protein L48"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338
ZFIN:ZDB-GENE-041008-125 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
CTD:51642 HOGENOM:HOG000070027 HOVERGEN:HBG055302
Gene3D:3.30.70.600 SUPFAM:SSF54999 EMBL:BC090274 IPI:IPI00504549
RefSeq:NP_001013299.1 UniGene:Dr.82699 ProteinModelPortal:Q5EAS0
STRING:Q5EAS0 GeneID:503593 KEGG:dre:503593 InParanoid:Q5EAS0
NextBio:20866227 ArrayExpress:Q5EAS0 Uniprot:Q5EAS0
Length = 207
Score = 107 (42.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 38 VNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDANYHL 97
+NV + GYD ++E Y ++++ + L I+ DES+ALP + + M+ + + L
Sbjct: 84 INVCVSGYDMTLVEHYSQYIHNLCKRLDIKVDESYALPTKSTEVMVMQEQGMKMFVDAVL 143
Query: 98 RIYERNVQ 105
+ +ER VQ
Sbjct: 144 KTHERVVQ 151
>UNIPROTKB|Q2YDI5 [details] [associations]
symbol:MRPL48 "39S ribosomal protein L48, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001848 Pfam:PF00338 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 EMBL:BC110207 IPI:IPI00698537 RefSeq:NP_001040028.1
UniGene:Bt.52398 ProteinModelPortal:Q2YDI5
Ensembl:ENSBTAT00000045090 GeneID:615873 KEGG:bta:615873 CTD:51642
eggNOG:NOG250119 GeneTree:ENSGT00390000012955 HOGENOM:HOG000070027
HOVERGEN:HBG055302 InParanoid:Q2YDI5 OMA:VHNLCNH OrthoDB:EOG4H4652
NextBio:20899837 ArrayExpress:Q2YDI5 Gene3D:3.30.70.600
SUPFAM:SSF54999 Uniprot:Q2YDI5
Length = 212
Score = 105 (42.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + LSI+ +ES+A+P + + +++ + + +
Sbjct: 88 YGTLNIHLIAYDMALTESYAQYVHNLCNHLSIKVEESYAMPTKTMEVLQLQDQGNKMLLD 147
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 148 SVLTTHERVVQ 158
>UNIPROTKB|F1SUS9 [details] [associations]
symbol:MRPL48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
GeneTree:ENSGT00390000012955 OMA:VHNLCNH Gene3D:3.30.70.600
SUPFAM:SSF54999 EMBL:CU915417 Ensembl:ENSSSCT00000016181
Uniprot:F1SUS9
Length = 213
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 35 YDEVNVQLKGYDFPVLESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDAN 94
Y +N+ L YD + ESY ++V+ + L+I+ +ES+A+P + + +++ S + +
Sbjct: 89 YGVLNIHLIAYDMALAESYAQYVHNLCNHLAIKVEESYAMPTKTMEVLQLQEQGSKMFLD 148
Query: 95 YHLRIYERNVQ 105
L +ER VQ
Sbjct: 149 AVLTTHERVVQ 159
>UNIPROTKB|F5H702 [details] [associations]
symbol:MRPL48 "39S ribosomal protein L48, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AP002770
SUPFAM:SSF54999 HGNC:HGNC:16653 ChiTaRS:MRPL48 IPI:IPI00807664
SMR:F5H702 Ensembl:ENST00000314282 Ensembl:ENST00000398483
Ensembl:ENST00000411840 Uniprot:F5H702
Length = 113
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 51 ESYQKFVYKIAASLSIQSDESWALPPQKFNITRMEPNSSVVDANYHLRIYERNVQ 105
ESY ++V+ + SLSI+ +ES+A+P + + +++ S + + L +ER VQ
Sbjct: 5 ESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERVVQ 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 105 105 0.00091 102 3 11 23 0.46 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 543 (58 KB)
Total size of DFA: 119 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.14u 0.08s 12.22t Elapsed: 00:00:01
Total cpu time: 12.14u 0.08s 12.22t Elapsed: 00:00:01
Start: Thu Aug 15 14:49:22 2013 End: Thu Aug 15 14:49:23 2013