Query psy3567
Match_columns 277
No_of_seqs 150 out of 2573
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 19:56:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3567hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 99.9 8.5E-24 1.8E-28 206.0 17.1 205 47-253 158-370 (968)
2 PLN00113 leucine-rich repeat r 99.9 5.1E-24 1.1E-28 207.6 15.4 237 15-253 93-346 (968)
3 KOG0444|consensus 99.9 3.6E-25 7.8E-30 194.2 -1.3 246 4-251 67-351 (1255)
4 KOG4194|consensus 99.9 1.3E-23 2.9E-28 182.9 3.3 212 15-226 149-377 (873)
5 KOG4194|consensus 99.9 1.4E-23 3E-28 182.7 1.7 200 53-253 173-379 (873)
6 KOG0444|consensus 99.9 8.1E-24 1.7E-28 185.8 -1.5 207 43-252 93-304 (1255)
7 KOG0472|consensus 99.9 2.2E-23 4.8E-28 174.3 -0.6 238 15-256 206-545 (565)
8 KOG0472|consensus 99.8 3.7E-23 7.9E-28 173.0 -5.4 201 47-252 108-310 (565)
9 KOG0617|consensus 99.8 6.8E-23 1.5E-27 153.3 -3.6 180 47-227 27-212 (264)
10 PRK15387 E3 ubiquitin-protein 99.8 8.9E-20 1.9E-24 169.3 12.8 183 54-259 283-465 (788)
11 PRK15370 E3 ubiquitin-protein 99.8 1.1E-19 2.4E-24 169.2 9.7 192 55-262 243-438 (754)
12 KOG0617|consensus 99.8 1.9E-22 4.2E-27 150.9 -7.1 185 67-255 25-215 (264)
13 PRK15370 E3 ubiquitin-protein 99.8 3E-18 6.5E-23 159.7 14.1 217 16-252 179-401 (754)
14 KOG0618|consensus 99.8 2.7E-20 5.9E-25 169.6 -0.3 237 13-252 217-489 (1081)
15 PRK15387 E3 ubiquitin-protein 99.7 7E-18 1.5E-22 156.8 9.8 202 15-235 242-465 (788)
16 PLN03210 Resistant to P. syrin 99.7 1.2E-15 2.6E-20 150.4 16.9 130 47-178 552-690 (1153)
17 KOG0532|consensus 99.7 5.2E-18 1.1E-22 147.8 -2.3 176 50-227 72-247 (722)
18 PLN03210 Resistant to P. syrin 99.6 9.1E-15 2E-19 144.3 18.1 229 15-249 611-903 (1153)
19 cd00116 LRR_RI Leucine-rich re 99.6 3.8E-16 8.3E-21 133.8 7.1 235 14-259 22-298 (319)
20 KOG4237|consensus 99.6 3.5E-17 7.5E-22 137.1 -1.1 222 32-254 66-361 (498)
21 cd00116 LRR_RI Leucine-rich re 99.6 2.4E-16 5.3E-21 135.0 3.0 206 47-253 17-264 (319)
22 KOG0618|consensus 99.6 3.2E-17 6.9E-22 149.9 -2.9 196 51-249 308-510 (1081)
23 KOG0532|consensus 99.6 4.1E-17 8.8E-22 142.3 -4.3 204 46-253 43-248 (722)
24 KOG4237|consensus 99.5 6.6E-16 1.4E-20 129.5 -0.1 127 54-180 68-199 (498)
25 COG4886 Leucine-rich repeat (L 99.5 1.1E-13 2.4E-18 122.2 7.8 192 57-252 97-290 (394)
26 COG4886 Leucine-rich repeat (L 99.5 1.2E-13 2.5E-18 122.0 7.1 179 47-227 110-290 (394)
27 KOG1259|consensus 99.3 2.5E-12 5.3E-17 105.0 3.2 204 47-253 176-413 (490)
28 PF14580 LRR_9: Leucine-rich r 99.3 6.9E-12 1.5E-16 97.0 5.3 127 124-254 20-153 (175)
29 KOG1909|consensus 99.3 2.4E-13 5.2E-18 112.6 -3.0 229 14-252 29-311 (382)
30 KOG3207|consensus 99.2 1.7E-12 3.6E-17 110.5 0.8 63 51-113 119-185 (505)
31 KOG1259|consensus 99.2 1.3E-12 2.9E-17 106.5 -0.1 207 48-259 209-447 (490)
32 KOG1909|consensus 99.2 1.3E-12 2.8E-17 108.4 -0.9 180 47-226 86-310 (382)
33 PF14580 LRR_9: Leucine-rich r 99.2 2.3E-11 5E-16 94.2 4.6 111 142-253 15-127 (175)
34 KOG3207|consensus 99.1 1.3E-11 2.8E-16 105.2 0.9 180 48-227 141-339 (505)
35 KOG4658|consensus 99.1 1.2E-10 2.7E-15 110.9 5.5 225 1-226 483-729 (889)
36 KOG0531|consensus 98.9 8.7E-11 1.9E-15 104.4 -1.9 196 51-252 70-268 (414)
37 KOG1859|consensus 98.9 2.5E-11 5.3E-16 109.5 -5.7 127 124-252 165-292 (1096)
38 KOG2982|consensus 98.8 1.4E-09 3.1E-14 88.9 2.1 106 54-159 46-159 (418)
39 KOG0531|consensus 98.8 6.2E-10 1.3E-14 98.9 -0.2 176 48-227 90-268 (414)
40 PF13855 LRR_8: Leucine rich r 98.8 2.7E-09 5.8E-14 68.1 2.6 58 54-111 2-60 (61)
41 PF13855 LRR_8: Leucine rich r 98.7 1.3E-08 2.8E-13 65.0 4.1 58 193-251 3-61 (61)
42 KOG4658|consensus 98.7 1.3E-08 2.8E-13 97.3 3.8 202 48-254 518-732 (889)
43 PLN03150 hypothetical protein; 98.7 5E-08 1.1E-12 90.9 7.4 105 148-253 420-529 (623)
44 KOG1859|consensus 98.7 4.1E-10 8.9E-15 101.8 -6.2 126 100-227 164-292 (1096)
45 PLN03150 hypothetical protein; 98.6 1.3E-07 2.9E-12 88.1 8.0 104 101-204 419-528 (623)
46 COG5238 RNA1 Ran GTPase-activa 98.6 1.6E-08 3.4E-13 81.9 1.2 208 47-255 24-288 (388)
47 KOG4579|consensus 98.5 3.4E-09 7.4E-14 77.1 -3.4 57 170-226 78-135 (177)
48 COG5238 RNA1 Ran GTPase-activa 98.5 1.9E-08 4E-13 81.5 -0.3 169 14-182 29-255 (388)
49 KOG1644|consensus 98.4 3.7E-07 8.1E-12 70.9 5.6 121 14-134 18-151 (233)
50 KOG4579|consensus 98.4 2.8E-08 6.2E-13 72.4 -1.2 94 47-140 47-140 (177)
51 PRK15386 type III secretion pr 98.4 1.4E-06 2.9E-11 75.9 8.3 135 47-202 46-188 (426)
52 KOG2120|consensus 98.3 1.7E-08 3.7E-13 82.7 -5.3 170 54-224 186-373 (419)
53 KOG1644|consensus 98.3 2.5E-06 5.5E-11 66.3 6.2 99 149-248 45-149 (233)
54 KOG2982|consensus 98.2 5.1E-07 1.1E-11 74.2 2.1 201 50-253 68-291 (418)
55 PF12799 LRR_4: Leucine Rich r 98.2 1.2E-06 2.5E-11 51.6 2.9 38 78-115 2-39 (44)
56 KOG2120|consensus 98.2 2E-08 4.3E-13 82.3 -7.2 149 101-249 186-348 (419)
57 PF12799 LRR_4: Leucine Rich r 98.1 3E-06 6.5E-11 49.9 3.5 38 147-184 2-39 (44)
58 KOG3665|consensus 98.1 2.1E-06 4.5E-11 80.4 3.2 130 52-182 121-263 (699)
59 PRK15386 type III secretion pr 98.0 3.4E-05 7.3E-10 67.4 9.3 129 77-225 52-188 (426)
60 KOG3665|consensus 97.8 3.5E-06 7.5E-11 79.0 -0.2 145 100-245 122-281 (699)
61 KOG2123|consensus 97.1 2.1E-05 4.5E-10 64.4 -4.2 106 146-255 19-131 (388)
62 PF13306 LRR_5: Leucine rich r 97.1 0.0012 2.7E-08 48.3 5.2 103 48-155 7-112 (129)
63 KOG2123|consensus 96.9 6.4E-05 1.4E-09 61.6 -3.0 79 54-135 20-100 (388)
64 KOG2739|consensus 96.5 0.0016 3.4E-08 53.0 2.4 82 145-227 42-129 (260)
65 PF13306 LRR_5: Leucine rich r 96.5 0.009 2E-07 43.6 6.3 12 96-107 31-42 (129)
66 KOG2739|consensus 96.5 0.00093 2E-08 54.3 1.0 105 49-155 39-152 (260)
67 PF00560 LRR_1: Leucine Rich R 95.8 0.0037 8.1E-08 30.6 0.7 14 80-93 3-16 (22)
68 KOG4308|consensus 95.8 2.9E-05 6.2E-10 69.9 -12.3 175 79-253 89-304 (478)
69 PF00560 LRR_1: Leucine Rich R 95.3 0.0078 1.7E-07 29.4 0.8 20 101-120 1-20 (22)
70 KOG4308|consensus 95.0 7.5E-05 1.6E-09 67.2 -12.3 173 55-227 89-303 (478)
71 PF13504 LRR_7: Leucine rich r 94.8 0.019 4.1E-07 26.1 1.2 14 55-68 3-16 (17)
72 KOG0473|consensus 94.3 0.0023 5E-08 51.4 -4.0 89 47-136 36-124 (326)
73 smart00370 LRR Leucine-rich re 94.0 0.044 9.6E-07 27.8 1.8 21 53-73 2-22 (26)
74 smart00369 LRR_TYP Leucine-ric 94.0 0.044 9.6E-07 27.8 1.8 21 53-73 2-22 (26)
75 KOG0473|consensus 93.3 0.0021 4.6E-08 51.6 -5.8 83 77-159 42-124 (326)
76 KOG4341|consensus 92.9 0.0076 1.6E-07 52.3 -3.5 61 15-87 138-200 (483)
77 smart00370 LRR Leucine-rich re 91.6 0.2 4.4E-06 25.3 2.2 17 170-186 3-19 (26)
78 smart00369 LRR_TYP Leucine-ric 91.6 0.2 4.4E-06 25.3 2.2 17 170-186 3-19 (26)
79 PF13516 LRR_6: Leucine Rich r 89.7 0.12 2.6E-06 25.6 0.3 19 239-257 2-20 (24)
80 KOG3864|consensus 85.8 0.16 3.4E-06 40.1 -1.0 59 213-276 150-209 (221)
81 KOG3864|consensus 80.4 0.47 1E-05 37.5 -0.3 17 47-63 119-135 (221)
82 smart00364 LRR_BAC Leucine-ric 79.9 1.3 2.8E-05 22.5 1.3 17 78-94 3-19 (26)
83 KOG1947|consensus 76.8 0.41 8.9E-06 43.2 -1.9 37 213-249 268-305 (482)
84 smart00368 LRR_RI Leucine rich 74.5 1.3 2.7E-05 22.9 0.4 14 240-253 3-16 (28)
85 smart00365 LRR_SD22 Leucine-ri 73.1 3.2 6.9E-05 21.1 1.7 15 100-114 2-16 (26)
86 KOG4242|consensus 73.0 16 0.00034 33.0 6.9 108 147-254 355-483 (553)
87 KOG4341|consensus 72.0 2.3 5E-05 37.5 1.6 172 50-221 265-459 (483)
88 KOG3763|consensus 62.9 2.1 4.5E-05 39.1 -0.4 61 144-204 216-283 (585)
89 KOG3763|consensus 61.6 3.8 8.3E-05 37.5 1.0 60 168-227 217-283 (585)
90 KOG1947|consensus 61.5 5.2 0.00011 36.0 1.9 89 47-135 208-307 (482)
91 smart00367 LRR_CC Leucine-rich 48.7 12 0.00027 18.5 1.3 13 213-225 1-13 (26)
92 TIGR00864 PCC polycystin catio 37.9 21 0.00046 39.4 2.1 30 198-227 2-32 (2740)
93 TIGR00864 PCC polycystin catio 25.9 43 0.00094 37.1 2.0 19 48-66 14-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=8.5e-24 Score=205.98 Aligned_cols=205 Identities=26% Similarity=0.412 Sum_probs=110.6
Q ss_pred HhhhccCccCEEEeecCCCC-cCChhHHHhhccccEEEccCCCCC-cCCccccccCCCcEEeccCCcCc-ccCccccCcc
Q psy3567 47 RHFETAKKTGVINLSHQGFK-EFPDEMNELKAVLRTLDISQNKIS-KFPLDLASYQLLKSLTFDQNKIE-SLPKDIGTLE 123 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~-~~~~~~~~~~~~L~~L~l~~~~i~-~~~~~~~~l~~L~~L~l~~~~i~-~~~~~~~~l~ 123 (277)
..++.+++|++|++++|.+. .+|..+..+ ++|++|++++|.+. .+|..+.++++|++|++++|.+. .+|..++.++
T Consensus 158 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 236 (968)
T PLN00113 158 NDIGSFSSLKVLDLGGNVLVGKIPNSLTNL-TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLT 236 (968)
T ss_pred hHHhcCCCCCEEECccCcccccCChhhhhC-cCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCC
Confidence 34455555555555555544 444444444 55555555555544 33444555555555555555554 3444555555
Q ss_pred cCceeeccccccc-ccchhhhcCCCCCEEEccCCCCc-cCccccCCCCCCCEEEccCCCCc-ccCchhccce-eeEEEcc
Q psy3567 124 KLENVSGNCNLIK-ELPLSFSKLHNLKHLSLSQNQLN-KFPTVLFNLQHLDVLDLSFNRIE-SIPDGIGKMK-VIEMNLN 199 (277)
Q Consensus 124 ~L~~L~l~~n~~~-~l~~~~~~l~~L~~L~l~~n~l~-~~~~~l~~~~~L~~L~l~~n~l~-~l~~~~~~~~-l~~L~l~ 199 (277)
+|++|++++|.+. .+|..+..+++|++|++++|.+. .+|..+..+++|++|++++|.++ .+|..+..++ ++.|+++
T Consensus 237 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~ 316 (968)
T PLN00113 237 SLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLF 316 (968)
T ss_pred CCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECC
Confidence 5555555555544 34445555555555555555554 34445555555556666555554 3444444442 5556666
Q ss_pred CCccC-cCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeeee
Q psy3567 200 KNQIC-HISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 200 ~n~l~-~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~ 253 (277)
+|.++ .+|..+..+++|+.|++++|.+. +.+|..+..+++|+.+++++|.+++
T Consensus 317 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~l~~~~~L~~L~Ls~n~l~~ 370 (968)
T PLN00113 317 SNNFTGKIPVALTSLPRLQVLQLWSNKFS-GEIPKNLGKHNNLTVLDLSTNNLTG 370 (968)
T ss_pred CCccCCcCChhHhcCCCCCEEECcCCCCc-CcCChHHhCCCCCcEEECCCCeeEe
Confidence 66555 34444555666666666666665 4555556666666666666666554
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=5.1e-24 Score=207.56 Aligned_cols=237 Identities=26% Similarity=0.411 Sum_probs=149.7
Q ss_pred CCceeEecCCCCcCCCCCCce-------eeeccCCcchhHh--hhccCccCEEEeecCCCC-cCChhHHHhhccccEEEc
Q psy3567 15 PSKLTLLLPGKKNRGLIEGTI-------FVLKMGNSATKRH--FETAKKTGVINLSHQGFK-EFPDEMNELKAVLRTLDI 84 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~~~~~~-------~~l~~~~~~~~~~--l~~~~~L~~L~l~~~~i~-~~~~~~~~~~~~L~~L~l 84 (277)
+.++.|++++|.+.|.+|.++ .++.+.++.+... .+.+++|++|++++|.+. .+|..+..+ ++|++|++
T Consensus 93 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l-~~L~~L~L 171 (968)
T PLN00113 93 PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSF-SSLKVLDL 171 (968)
T ss_pred CCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcC-CCCCEEEC
Confidence 445555555555555444322 2333333333211 123555666666666655 445555444 66677777
Q ss_pred cCCCCC-cCCccccccCCCcEEeccCCcCc-ccCccccCcccCceeeccccccc-ccchhhhcCCCCCEEEccCCCCc-c
Q psy3567 85 SQNKIS-KFPLDLASYQLLKSLTFDQNKIE-SLPKDIGTLEKLENVSGNCNLIK-ELPLSFSKLHNLKHLSLSQNQLN-K 160 (277)
Q Consensus 85 ~~~~i~-~~~~~~~~l~~L~~L~l~~~~i~-~~~~~~~~l~~L~~L~l~~n~~~-~l~~~~~~l~~L~~L~l~~n~l~-~ 160 (277)
++|.+. .+|..+.++++|++|++++|.+. .+|..++.+.+|++|++++|.+. .+|..++.+++|++|++++|.+. .
T Consensus 172 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 251 (968)
T PLN00113 172 GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGP 251 (968)
T ss_pred ccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccc
Confidence 666654 45556666677777777766665 34666666777777777766665 45666777777777777777665 4
Q ss_pred CccccCCCCCCCEEEccCCCCc-ccCchhccc-eeeEEEccCCccC-cCCcCccCCCCCCEEEcCCCccccCccCccccC
Q psy3567 161 FPTVLFNLQHLDVLDLSFNRIE-SIPDGIGKM-KVIEMNLNKNQIC-HISPDISECVRLKILRLEENCLAINAIPTCILT 237 (277)
Q Consensus 161 ~~~~l~~~~~L~~L~l~~n~l~-~l~~~~~~~-~l~~L~l~~n~l~-~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~ 237 (277)
+|..++.+++|++|++++|.++ .+|..+..+ ++++|++++|.++ .+|..+..+++|+.|++++|.++ +.+|..+..
T Consensus 252 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~ 330 (968)
T PLN00113 252 IPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFT-GKIPVALTS 330 (968)
T ss_pred cChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccC-CcCChhHhc
Confidence 5666667777777777777666 456666555 3777777777776 55666777777777777777776 566777777
Q ss_pred CCCccEEEcCCCeeee
Q psy3567 238 SSNVCTLNVEGNLFEM 253 (277)
Q Consensus 238 ~~~L~~l~l~~n~~~~ 253 (277)
+++|+.|++++|.+++
T Consensus 331 l~~L~~L~L~~n~l~~ 346 (968)
T PLN00113 331 LPRLQVLQLWSNKFSG 346 (968)
T ss_pred CCCCCEEECcCCCCcC
Confidence 7777888887777764
No 3
>KOG0444|consensus
Probab=99.89 E-value=3.6e-25 Score=194.18 Aligned_cols=246 Identities=23% Similarity=0.384 Sum_probs=178.9
Q ss_pred hhhhcCCCCCCCCceeEecCCCCcCCC-CCCceee------eccCCcch---hHhhhccCccCEEEeecCCCCcCChhHH
Q psy3567 4 LTEDFGWDPSSPSKLTLLLPGKKNRGL-IEGTIFV------LKMGNSAT---KRHFETAKKTGVINLSHQGFKEFPDEMN 73 (277)
Q Consensus 4 l~~~~~~~~~~~~l~~l~l~~~~~~~~-~~~~~~~------l~~~~~~~---~~~l~~~~~L~~L~l~~~~i~~~~~~~~ 73 (277)
|+...|-..+-|+++++.++.|++... +|.+++. +.++.+.+ +..+...+++-+|+|++|+|..+|..++
T Consensus 67 L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lf 146 (1255)
T KOG0444|consen 67 LISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLF 146 (1255)
T ss_pred hHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHH
Confidence 455556666678888888888888544 4555543 33444333 4677777888888888888888887777
Q ss_pred HhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCc--------------------------ccCccccCcccCce
Q psy3567 74 ELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIE--------------------------SLPKDIGTLEKLEN 127 (277)
Q Consensus 74 ~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~--------------------------~~~~~~~~l~~L~~ 127 (277)
..+..|-+|++++|++..+|+.+..+..|+.|++++|.+. .+|.++..+.+|..
T Consensus 147 inLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~d 226 (1255)
T KOG0444|consen 147 INLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRD 226 (1255)
T ss_pred HhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhh
Confidence 6667777888888888888877777777777777777652 24555667778888
Q ss_pred eecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccC--
Q psy3567 128 VSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQIC-- 204 (277)
Q Consensus 128 L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~-- 204 (277)
+|+++|.+..+|..+.++.+|+.|++++|.++.+....+.+.+|++|++++|+++.+|..+..++ ++.|++.+|+++
T Consensus 227 vDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~Fe 306 (1255)
T KOG0444|consen 227 VDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFE 306 (1255)
T ss_pred ccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCccccc
Confidence 88888888888888888889999999988888776666777888888888888888887776663 777777777765
Q ss_pred cCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCee
Q psy3567 205 HISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLF 251 (277)
Q Consensus 205 ~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~ 251 (277)
.||..++.+.+|.++..++|.+. -+|..++.|..|++|.|+.|.+
T Consensus 307 GiPSGIGKL~~Levf~aanN~LE--lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 307 GIPSGIGKLIQLEVFHAANNKLE--LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred CCccchhhhhhhHHHHhhccccc--cCchhhhhhHHHHHhcccccce
Confidence 66666666666666666666664 5566666666666666666644
No 4
>KOG4194|consensus
Probab=99.88 E-value=1.3e-23 Score=182.86 Aligned_cols=212 Identities=25% Similarity=0.307 Sum_probs=146.4
Q ss_pred CCceeEecCCCCcCCCC----C--CceeeeccCCcchh----HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEc
Q psy3567 15 PSKLTLLLPGKKNRGLI----E--GTIFVLKMGNSATK----RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDI 84 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~~----~--~~~~~l~~~~~~~~----~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l 84 (277)
+.++++||+.|.++-.- | ..+.++.+.++++. ..|..+.+|.+|.|++|+++.+|...|+-+++|+.|++
T Consensus 149 ~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdL 228 (873)
T KOG4194|consen 149 PALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDL 228 (873)
T ss_pred hhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhc
Confidence 45666777777664332 2 22355666665553 67888888999999999999999888885589999999
Q ss_pred cCCCCCcCCc-cccccCCCcEEeccCCcCcccC-ccccCcccCceeecccccccccch-hhhcCCCCCEEEccCCCCccC
Q psy3567 85 SQNKISKFPL-DLASYQLLKSLTFDQNKIESLP-KDIGTLEKLENVSGNCNLIKELPL-SFSKLHNLKHLSLSQNQLNKF 161 (277)
Q Consensus 85 ~~~~i~~~~~-~~~~l~~L~~L~l~~~~i~~~~-~~~~~l~~L~~L~l~~n~~~~l~~-~~~~l~~L~~L~l~~n~l~~~ 161 (277)
..|+|..+.. .|.++++|+.|.+..|.|..+. ..|..+.+++++++..|.+..+.. ++.++.+|+.|++++|.+.++
T Consensus 229 nrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ri 308 (873)
T KOG4194|consen 229 NRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRI 308 (873)
T ss_pred cccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhhee
Confidence 9998876633 5788888888888888888763 467788888888888888877654 467778888888888887766
Q ss_pred -ccccCCCCCCCEEEccCCCCcccCchhcc-c-eeeEEEccCCccCcCCcC-ccCCCCCCEEEcCCCcc
Q psy3567 162 -PTVLFNLQHLDVLDLSFNRIESIPDGIGK-M-KVIEMNLNKNQICHISPD-ISECVRLKILRLEENCL 226 (277)
Q Consensus 162 -~~~l~~~~~L~~L~l~~n~l~~l~~~~~~-~-~l~~L~l~~n~l~~l~~~-l~~~~~L~~L~l~~n~~ 226 (277)
+..+...++|++|+++.|.++.+++.... + .+++|.++.|+++.+.+. |..+++|..|||+.|.+
T Consensus 309 h~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~l 377 (873)
T KOG4194|consen 309 HIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNEL 377 (873)
T ss_pred ecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeE
Confidence 45566677888888888888777655322 2 255555555555544432 33444444444444443
No 5
>KOG4194|consensus
Probab=99.87 E-value=1.4e-23 Score=182.71 Aligned_cols=200 Identities=25% Similarity=0.343 Sum_probs=128.3
Q ss_pred CccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCcc-ccccCCCcEEeccCCcCccc-CccccCcccCceeec
Q psy3567 53 KKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLD-LASYQLLKSLTFDQNKIESL-PKDIGTLEKLENVSG 130 (277)
Q Consensus 53 ~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~-~~~l~~L~~L~l~~~~i~~~-~~~~~~l~~L~~L~l 130 (277)
.++++|+|++|+|+.+-.+-|..+.+|.+|.++.|+++++|.. |+++++|+.|++..|+|.-+ .-.|..+++|+.+.+
T Consensus 173 ~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlkl 252 (873)
T KOG4194|consen 173 VNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKL 252 (873)
T ss_pred CCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhh
Confidence 3444444444444433333333224444444444444444442 44455555555555555433 334555555555555
Q ss_pred ccccccccch-hhhcCCCCCEEEccCCCCccCc-cccCCCCCCCEEEccCCCCccc--CchhccceeeEEEccCCccCcC
Q psy3567 131 NCNLIKELPL-SFSKLHNLKHLSLSQNQLNKFP-TVLFNLQHLDVLDLSFNRIESI--PDGIGKMKVIEMNLNKNQICHI 206 (277)
Q Consensus 131 ~~n~~~~l~~-~~~~l~~L~~L~l~~n~l~~~~-~~l~~~~~L~~L~l~~n~l~~l--~~~~~~~~l~~L~l~~n~l~~l 206 (277)
..|.+..+.+ .|..+.++++|++..|++..+. .+++.+++|++|+++.|.|..+ ..|-+..++.+|++++|+|+++
T Consensus 253 qrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l 332 (873)
T KOG4194|consen 253 QRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRL 332 (873)
T ss_pred hhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccC
Confidence 5555555543 3666777778888888777663 4566788888888888888854 3344445689999999999988
Q ss_pred CcC-ccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeeee
Q psy3567 207 SPD-ISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 207 ~~~-l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~ 253 (277)
++. +..+..|+.|+|++|.++ ..-...|..+++|++|||+.|.++.
T Consensus 333 ~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~ 379 (873)
T KOG4194|consen 333 DEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSW 379 (873)
T ss_pred ChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEE
Confidence 875 888888999999999887 3444567788899999999997763
No 6
>KOG0444|consensus
Probab=99.87 E-value=8.1e-24 Score=185.78 Aligned_cols=207 Identities=24% Similarity=0.365 Sum_probs=107.9
Q ss_pred cchhHhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCcc-ccccCCCcEEeccCCcCcccCccccC
Q psy3567 43 SATKRHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLD-LASYQLLKSLTFDQNKIESLPKDIGT 121 (277)
Q Consensus 43 ~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~-~~~l~~L~~L~l~~~~i~~~~~~~~~ 121 (277)
..++..+-.+..|++|||++|++.++|..+-.. .+.-+|++++|+|.++|.. |.++..|-+||+++|++..+|+.+..
T Consensus 93 sGiP~diF~l~dLt~lDLShNqL~EvP~~LE~A-Kn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RR 171 (1255)
T KOG0444|consen 93 SGIPTDIFRLKDLTILDLSHNQLREVPTNLEYA-KNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRR 171 (1255)
T ss_pred CCCCchhcccccceeeecchhhhhhcchhhhhh-cCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHH
Confidence 333455555555566666666666666555444 5555566666666666654 55666666666666666666666666
Q ss_pred cccCceeecccccccccc-hhhhcCCCCCEEEccCCCCc--cCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEE
Q psy3567 122 LEKLENVSGNCNLIKELP-LSFSKLHNLKHLSLSQNQLN--KFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMN 197 (277)
Q Consensus 122 l~~L~~L~l~~n~~~~l~-~~~~~l~~L~~L~l~~n~l~--~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~ 197 (277)
+..|++|.+++|++.... ..+..+.+|+.|.+++++-+ .+|..+..+.+|..++++.|.+..+|..++... ++.|+
T Consensus 172 L~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLN 251 (1255)
T KOG0444|consen 172 LSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLN 251 (1255)
T ss_pred HhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheec
Confidence 666666666666543110 01111222222222222211 234444444555555555555555555555442 55555
Q ss_pred ccCCccCcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 198 LNKNQICHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 198 l~~n~l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
+++|+|+++....+...+|..|++|.|+++ .+|.+++.++.|+.|++.+|.++
T Consensus 252 LS~N~iteL~~~~~~W~~lEtLNlSrNQLt--~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 252 LSGNKITELNMTEGEWENLETLNLSRNQLT--VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred cCcCceeeeeccHHHHhhhhhhccccchhc--cchHHHhhhHHHHHHHhccCccc
Confidence 555555555555555555555555555554 55555555555555555555444
No 7
>KOG0472|consensus
Probab=99.86 E-value=2.2e-23 Score=174.27 Aligned_cols=238 Identities=29% Similarity=0.433 Sum_probs=174.7
Q ss_pred CCceeEecCCCCcCCCC--C--CceeeeccCCcchh----HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccC
Q psy3567 15 PSKLTLLLPGKKNRGLI--E--GTIFVLKMGNSATK----RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQ 86 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~~--~--~~~~~l~~~~~~~~----~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~ 86 (277)
.++.-|++..|.++-.. | ..+..++.+.+.+. +...+++.+.+||+.+|+++++|+++..+ .+|..||+++
T Consensus 206 ~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~clL-rsL~rLDlSN 284 (565)
T KOG0472|consen 206 ESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLL-RSLERLDLSN 284 (565)
T ss_pred hhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHHh-hhhhhhcccC
Confidence 34555666666654321 1 12234455555553 45558888899999999999999888877 8889999999
Q ss_pred CCCCcCCccccccCCCcEEeccCCcCcccCcc---------------------------------------c---cCccc
Q psy3567 87 NKISKFPLDLASYQLLKSLTFDQNKIESLPKD---------------------------------------I---GTLEK 124 (277)
Q Consensus 87 ~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~---------------------------------------~---~~l~~ 124 (277)
|.|+.+|.+++++ +|+.|-+.+|.+..+-.. + ....+
T Consensus 285 N~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~ 363 (565)
T KOG0472|consen 285 NDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIIT 363 (565)
T ss_pred CccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhh
Confidence 9999888888888 888888887766311000 0 00011
Q ss_pred --------------------------Cceeeccccc------------------------ccccchhhhcCCCCCEEEcc
Q psy3567 125 --------------------------LENVSGNCNL------------------------IKELPLSFSKLHNLKHLSLS 154 (277)
Q Consensus 125 --------------------------L~~L~l~~n~------------------------~~~l~~~~~~l~~L~~L~l~ 154 (277)
...++++.|. +.-+|..++.+++|..|+++
T Consensus 364 tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~ 443 (565)
T KOG0472|consen 364 TKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLS 443 (565)
T ss_pred hhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecc
Confidence 1112333333 33344556777888888998
Q ss_pred CCCCccCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccCcCCcC-ccCCCCCCEEEcCCCccccCccC
Q psy3567 155 QNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQICHISPD-ISECVRLKILRLEENCLAINAIP 232 (277)
Q Consensus 155 ~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~-l~~~~~L~~L~l~~n~~~~~~~~ 232 (277)
+|-+.++|..++.+..|++++++.|++..+|...+... ++.+-.++|++..++++ +..+.+|+.||+.+|-+. .+|
T Consensus 444 NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq--~IP 521 (565)
T KOG0472|consen 444 NNLLNDLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ--QIP 521 (565)
T ss_pred cchhhhcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh--hCC
Confidence 88888898888888889999999998888998887765 55566667899999888 899999999999999997 899
Q ss_pred ccccCCCCccEEEcCCCeeeeccc
Q psy3567 233 TCILTSSNVCTLNVEGNLFEMKAF 256 (277)
Q Consensus 233 ~~~~~~~~L~~l~l~~n~~~~~~~ 256 (277)
..+.+|.++++|.++||+|..+..
T Consensus 522 p~LgnmtnL~hLeL~gNpfr~Pr~ 545 (565)
T KOG0472|consen 522 PILGNMTNLRHLELDGNPFRQPRH 545 (565)
T ss_pred hhhccccceeEEEecCCccCCCHH
Confidence 999999999999999999985443
No 8
>KOG0472|consensus
Probab=99.83 E-value=3.7e-23 Score=172.97 Aligned_cols=201 Identities=25% Similarity=0.414 Sum_probs=144.5
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCc
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLE 126 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~ 126 (277)
+.+.++..++.++++.|.+.++|++++++ ..+..++..+|+++.+|+.+..+.++..+++.+|.+...|+..-.++.|+
T Consensus 108 ~~i~s~~~l~~l~~s~n~~~el~~~i~~~-~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~ 186 (565)
T KOG0472|consen 108 EQIGSLISLVKLDCSSNELKELPDSIGRL-LDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLK 186 (565)
T ss_pred HHHhhhhhhhhhhccccceeecCchHHHH-hhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHH
Confidence 55566666666666666666666666666 56666666666666666666666666667777776666666555577777
Q ss_pred eeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhcc-c-eeeEEEccCCccC
Q psy3567 127 NVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGK-M-KVIEMNLNKNQIC 204 (277)
Q Consensus 127 ~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~-~-~l~~L~l~~n~l~ 204 (277)
+++...|.+..+|+.++.+.+|.-|++..|++..+| .+..+..|.+++++.|.+..+|..... + .+..+|+.+|+++
T Consensus 187 ~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk 265 (565)
T KOG0472|consen 187 HLDCNSNLLETLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK 265 (565)
T ss_pred hcccchhhhhcCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc
Confidence 777777777777777777777777777777777776 566667777777777777777776653 3 3777888888888
Q ss_pred cCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 205 HISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 205 ~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
++|..+.-+++|..||+|+|.++ .+|..++++ +|+.|.+.||++.
T Consensus 266 e~Pde~clLrsL~rLDlSNN~is--~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 266 EVPDEICLLRSLERLDLSNNDIS--SLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cCchHHHHhhhhhhhcccCCccc--cCCcccccc-eeeehhhcCCchH
Confidence 88888777788888888888776 778888887 7888888888765
No 9
>KOG0617|consensus
Probab=99.83 E-value=6.8e-23 Score=153.33 Aligned_cols=180 Identities=26% Similarity=0.449 Sum_probs=157.4
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCc
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLE 126 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~ 126 (277)
..+-.+..++.|.+++|+++.+|+.++.+ .+|+.|++.+|+++.+|.+++.+++|+.|++..|++..+|.+|+.++.|+
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~~vppnia~l-~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~le 105 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLTVVPPNIAEL-KNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALE 105 (264)
T ss_pred ccccchhhhhhhhcccCceeecCCcHHHh-hhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhh
Confidence 34556677888999999999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred eeeccccccc--ccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCcc
Q psy3567 127 NVSGNCNLIK--ELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQI 203 (277)
Q Consensus 127 ~L~l~~n~~~--~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l 203 (277)
.||++.|.+. .+|..|..+..|+.|++++|.+..+|+.++++++|+.|.+..|.+-++|..++.+. +++|.+++|++
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhccccee
Confidence 9999999887 57888999999999999999999999999999999999999999999999998885 89999999999
Q ss_pred CcCCcCccCCCC---CCEEEcCCCccc
Q psy3567 204 CHISPDISECVR---LKILRLEENCLA 227 (277)
Q Consensus 204 ~~l~~~l~~~~~---L~~L~l~~n~~~ 227 (277)
+.+|+.++.+.- =..+.+..|++.
T Consensus 186 ~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 186 TVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred eecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 999988765431 234444555543
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=8.9e-20 Score=169.27 Aligned_cols=183 Identities=24% Similarity=0.263 Sum_probs=120.7
Q ss_pred ccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccc
Q psy3567 54 KTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCN 133 (277)
Q Consensus 54 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n 133 (277)
.|+.|++++|+++.+|.. +++|+.|++++|++..+|... ..|+.|++++|.+..+|.. ..+|++|++++|
T Consensus 283 ~L~~L~Ls~N~Lt~LP~~----p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~~LP~l---p~~Lq~LdLS~N 352 (788)
T PRK15387 283 GLCKLWIFGNQLTSLPVL----PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLTSLPTL---PSGLQELSVSDN 352 (788)
T ss_pred hcCEEECcCCcccccccc----ccccceeECCCCccccCCCCc---ccccccccccCcccccccc---ccccceEecCCC
Confidence 444455555555544431 144555555555555444321 2344455555555544421 135777777777
Q ss_pred cccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcCccCC
Q psy3567 134 LIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPDISEC 213 (277)
Q Consensus 134 ~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~l~~~ 213 (277)
.+..+|.. ..+|+.|++++|.+..+|.. ..+|+.|++++|.++.+|... ..++.|++++|+++.+|...
T Consensus 353 ~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt~LP~l~--s~L~~LdLS~N~LssIP~l~--- 421 (788)
T PRK15387 353 QLASLPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLPVLP--SELKELMVSGNRLTSLPMLP--- 421 (788)
T ss_pred ccCCCCCC---CcccceehhhccccccCccc---ccccceEEecCCcccCCCCcc--cCCCEEEccCCcCCCCCcch---
Confidence 77766642 23566667777777766643 246888888888888777542 24788999999999888643
Q ss_pred CCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeeeecccccc
Q psy3567 214 VRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEMKAFQQL 259 (277)
Q Consensus 214 ~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~l 259 (277)
.+|+.|++++|.++ .+|..+.++++++.+++++|++++..+..+
T Consensus 422 ~~L~~L~Ls~NqLt--~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 422 SGLLSLSVYRNQLT--RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hhhhhhhhccCccc--ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 46888999999997 789999999999999999999998765544
No 11
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.1e-19 Score=169.21 Aligned_cols=192 Identities=25% Similarity=0.443 Sum_probs=115.1
Q ss_pred cCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeeccccc
Q psy3567 55 TGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNL 134 (277)
Q Consensus 55 L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~ 134 (277)
|+.|++++|++..+|..+. .+|+.|++++|++..+|..+. .+|+.|++++|++..+|..+. .+|++|++++|.
T Consensus 243 L~~L~Ls~N~L~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~ 315 (754)
T PRK15370 243 IQEMELSINRITELPERLP---SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNS 315 (754)
T ss_pred ccEEECcCCccCcCChhHh---CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCc
Confidence 4444444444444443221 234444444444444443322 244455555554444443321 234455555555
Q ss_pred ccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcCccCCC
Q psy3567 135 IKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPDISECV 214 (277)
Q Consensus 135 ~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~ 214 (277)
+..+|..+ .++|+.|++++|.++.+|..+. ++|+.|++++|.++.+|..+. ..+++|++++|+++.+|..+. .
T Consensus 316 Lt~LP~~l--~~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~~lp-~~L~~LdLs~N~Lt~LP~~l~--~ 388 (754)
T PRK15370 316 LTALPETL--PPGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPETLP-PTITTLDVSRNALTNLPENLP--A 388 (754)
T ss_pred cccCCccc--cccceeccccCCccccCChhhc--CcccEEECCCCCCCcCChhhc-CCcCEEECCCCcCCCCCHhHH--H
Confidence 54444322 2467777777777777765543 578888888888887776553 357888888888888887654 3
Q ss_pred CCCEEEcCCCccccCccCcccc----CCCCccEEEcCCCeeeeccccccccc
Q psy3567 215 RLKILRLEENCLAINAIPTCIL----TSSNVCTLNVEGNLFEMKAFQQLDGY 262 (277)
Q Consensus 215 ~L~~L~l~~n~~~~~~~~~~~~----~~~~L~~l~l~~n~~~~~~~~~l~~~ 262 (277)
.|+.|++++|.+. .+|..+. ..+.+..+++.+|+++...++.++.+
T Consensus 389 sL~~LdLs~N~L~--~LP~sl~~~~~~~~~l~~L~L~~Npls~~tl~~L~~L 438 (754)
T PRK15370 389 ALQIMQASRNNLV--RLPESLPHFRGEGPQPTRIIVEYNPFSERTIQNMQRL 438 (754)
T ss_pred HHHHHhhccCCcc--cCchhHHHHhhcCCCccEEEeeCCCccHHHHHHHHHh
Confidence 6888888888886 5565443 34788999999999987666655433
No 12
>KOG0617|consensus
Probab=99.80 E-value=1.9e-22 Score=150.89 Aligned_cols=185 Identities=28% Similarity=0.463 Sum_probs=163.6
Q ss_pred cCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccccccccchhhhcCC
Q psy3567 67 EFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLH 146 (277)
Q Consensus 67 ~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~ 146 (277)
++| +++.+ .+++.|.+++|.++.+|+.++.+.+|+.|++.+|+|+.+|.++..+++|++|+++-|++..+|.+|+.++
T Consensus 25 ~~~-gLf~~-s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p 102 (264)
T KOG0617|consen 25 ELP-GLFNM-SNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFP 102 (264)
T ss_pred hcc-cccch-hhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCc
Confidence 454 35666 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEccCCCCc--cCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccCcCCcCccCCCCCCEEEcCC
Q psy3567 147 NLKHLSLSQNQLN--KFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQICHISPDISECVRLKILRLEE 223 (277)
Q Consensus 147 ~L~~L~l~~n~l~--~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~ 223 (277)
.|+.||+++|++. .+|..++.+..|+.|++++|.+.-+|..++.++ ++.|.+.+|.+-++|..++.+..|+.|.+.+
T Consensus 103 ~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhccc
Confidence 9999999999998 678888889999999999999999999999885 9999999999999999999999999999999
Q ss_pred CccccCccCccccCCC---CccEEEcCCCeeeecc
Q psy3567 224 NCLAINAIPTCILTSS---NVCTLNVEGNLFEMKA 255 (277)
Q Consensus 224 n~~~~~~~~~~~~~~~---~L~~l~l~~n~~~~~~ 255 (277)
|.++ .+|..+.++. +-+.+.+..|+|-...
T Consensus 183 nrl~--vlppel~~l~l~~~k~v~r~E~NPwv~pI 215 (264)
T KOG0617|consen 183 NRLT--VLPPELANLDLVGNKQVMRMEENPWVNPI 215 (264)
T ss_pred ceee--ecChhhhhhhhhhhHHHHhhhhCCCCChH
Confidence 9998 7788777652 3344555666665443
No 13
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.78 E-value=3e-18 Score=159.74 Aligned_cols=217 Identities=23% Similarity=0.362 Sum_probs=147.6
Q ss_pred CceeEecCCCCcCCC---CCCceeeeccCCcchh---HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCC
Q psy3567 16 SKLTLLLPGKKNRGL---IEGTIFVLKMGNSATK---RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKI 89 (277)
Q Consensus 16 ~l~~l~l~~~~~~~~---~~~~~~~l~~~~~~~~---~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i 89 (277)
+...|++++++++.. +|+.+..+.+.++.+. ..+ .++|++|++++|+++.+|..+. ++|+.|++++|++
T Consensus 179 ~~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~l--~~nL~~L~Ls~N~LtsLP~~l~---~~L~~L~Ls~N~L 253 (754)
T PRK15370 179 NKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENL--QGNIKTLYANSNQLTSIPATLP---DTIQEMELSINRI 253 (754)
T ss_pred CceEEEeCCCCcCcCCcccccCCcEEEecCCCCCcCChhh--ccCCCEEECCCCccccCChhhh---ccccEEECcCCcc
Confidence 345677777666532 2344555555554443 222 2467778888887777776443 4677788888877
Q ss_pred CcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCC
Q psy3567 90 SKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQ 169 (277)
Q Consensus 90 ~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~ 169 (277)
..+|..+. .+|+.|++++|++..+|..+. .+|++|++++|.+..+|..+. ++|+.|++++|.+..+|..+. +
T Consensus 254 ~~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~--~ 325 (754)
T PRK15370 254 TELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPETLP--P 325 (754)
T ss_pred CcCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCccccCCcccc--c
Confidence 77776553 467788888887777766553 467888888887777765432 367777788887777765443 5
Q ss_pred CCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCC
Q psy3567 170 HLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGN 249 (277)
Q Consensus 170 ~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n 249 (277)
+|+.|++++|.++.+|..+. ..++.|++++|+++.+|..+. ++|+.|++++|.++ .+|..+. ..|+.|++++|
T Consensus 326 sL~~L~Ls~N~Lt~LP~~l~-~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt--~LP~~l~--~sL~~LdLs~N 398 (754)
T PRK15370 326 GLKTLEAGENALTSLPASLP-PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALT--NLPENLP--AALQIMQASRN 398 (754)
T ss_pred cceeccccCCccccCChhhc-CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCC--CCCHhHH--HHHHHHhhccC
Confidence 78888888888887776553 357888888888887776553 57888888888876 6666554 36888888888
Q ss_pred eee
Q psy3567 250 LFE 252 (277)
Q Consensus 250 ~~~ 252 (277)
.++
T Consensus 399 ~L~ 401 (754)
T PRK15370 399 NLV 401 (754)
T ss_pred Ccc
Confidence 776
No 14
>KOG0618|consensus
Probab=99.77 E-value=2.7e-20 Score=169.62 Aligned_cols=237 Identities=23% Similarity=0.349 Sum_probs=190.5
Q ss_pred CCCCceeEecCCCCcCCC----CCCceeeeccCCcch---hHhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEcc
Q psy3567 13 SSPSKLTLLLPGKKNRGL----IEGTIFVLKMGNSAT---KRHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDIS 85 (277)
Q Consensus 13 ~~~~l~~l~l~~~~~~~~----~~~~~~~l~~~~~~~---~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~ 85 (277)
..++++.|+...|.+... .|..+..+.++.+.+ +..++.|.+++.+...+|+++.+|..++.. .+|+.|.+.
T Consensus 217 ~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~-~~L~~l~~~ 295 (1081)
T KOG0618|consen 217 SGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISRI-TSLVSLSAA 295 (1081)
T ss_pred cCcchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhhh-hhHHHHHhh
Confidence 345666677777766522 234445555555433 488899999999999999999999999999 999999999
Q ss_pred CCCCCcCCccccccCCCcEEeccCCcCcccCcccc--------------------------CcccCceeecccccccc-c
Q psy3567 86 QNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIG--------------------------TLEKLENVSGNCNLIKE-L 138 (277)
Q Consensus 86 ~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~--------------------------~l~~L~~L~l~~n~~~~-l 138 (277)
+|.++.+|+...++..|+.|++..|.+..+|..+- .++.|+.|.+.+|.+.+ .
T Consensus 296 ~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c 375 (1081)
T KOG0618|consen 296 YNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSC 375 (1081)
T ss_pred hhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccc
Confidence 99999999999999999999999999986665321 23445666667777663 2
Q ss_pred chhhhcCCCCCEEEccCCCCccCcc-ccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccCcCCcCccCCCCC
Q psy3567 139 PLSFSKLHNLKHLSLSQNQLNKFPT-VLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQICHISPDISECVRL 216 (277)
Q Consensus 139 ~~~~~~l~~L~~L~l~~n~l~~~~~-~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~l~~~~~L 216 (277)
-+.+..+++|+.|++++|++.++|. .+.++..|++|++++|+++.+|.++..+. +++|....|++..+| .+.+++.|
T Consensus 376 ~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL 454 (1081)
T KOG0618|consen 376 FPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQL 454 (1081)
T ss_pred hhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcc
Confidence 3357788999999999999999986 45689999999999999999999988876 899999999999999 78899999
Q ss_pred CEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 217 KILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 217 ~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
+.+|++.|.++...+|..... ++|++||++||...
T Consensus 455 ~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 455 KVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRL 489 (1081)
T ss_pred eEEecccchhhhhhhhhhCCC-cccceeeccCCccc
Confidence 999999999985555554443 79999999999643
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.74 E-value=7e-18 Score=156.76 Aligned_cols=202 Identities=21% Similarity=0.251 Sum_probs=157.7
Q ss_pred CCceeEecCCCCcCCC--CCCceeeeccCCcchh--------------------HhhhccCccCEEEeecCCCCcCChhH
Q psy3567 15 PSKLTLLLPGKKNRGL--IEGTIFVLKMGNSATK--------------------RHFETAKKTGVINLSHQGFKEFPDEM 72 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~--~~~~~~~l~~~~~~~~--------------------~~l~~~~~L~~L~l~~~~i~~~~~~~ 72 (277)
+++++|++++|.++.. .|+.+..+.+..+.+. ..-...+.|+.|++++|+++.+|..
T Consensus 242 ~~Lk~LdLs~N~LtsLP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~Lp~l- 320 (788)
T PRK15387 242 PELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPAL- 320 (788)
T ss_pred CCCcEEEecCCccCcccCcccccceeeccCCchhhhhhchhhcCEEECcCCccccccccccccceeECCCCccccCCCC-
Confidence 6788888888877643 2344444444443322 1112236899999999999998862
Q ss_pred HHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccccccccchhhhcCCCCCEEE
Q psy3567 73 NELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLS 152 (277)
Q Consensus 73 ~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~ 152 (277)
+..|+.|++++|+++.+|.. ..+|++|++++|++..+|.. ..+|+.|++++|.+..+|.. ..+|+.|+
T Consensus 321 ---p~~L~~L~Ls~N~L~~LP~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~l---~~~L~~Ld 388 (788)
T PRK15387 321 ---PSELCKLWAYNNQLTSLPTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELI 388 (788)
T ss_pred ---cccccccccccCcccccccc---ccccceEecCCCccCCCCCC---CcccceehhhccccccCccc---ccccceEE
Confidence 25788999999999988852 25799999999999988753 35688899999999988754 35799999
Q ss_pred ccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcCccCCCCCCEEEcCCCccccCccC
Q psy3567 153 LSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPDISECVRLKILRLEENCLAINAIP 232 (277)
Q Consensus 153 l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~ 232 (277)
+++|.+..+|... ++|+.|++++|.++.+|.... .++.|++++|+++.+|..+..+++|+.|++++|+++ +..+
T Consensus 389 Ls~N~Lt~LP~l~---s~L~~LdLS~N~LssIP~l~~--~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls-~~~~ 462 (788)
T PRK15387 389 VSGNRLTSLPVLP---SELKELMVSGNRLTSLPMLPS--GLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS-ERTL 462 (788)
T ss_pred ecCCcccCCCCcc---cCCCEEEccCCcCCCCCcchh--hhhhhhhccCcccccChHHhhccCCCeEECCCCCCC-chHH
Confidence 9999999887543 679999999999998886432 478899999999999999999999999999999998 5555
Q ss_pred ccc
Q psy3567 233 TCI 235 (277)
Q Consensus 233 ~~~ 235 (277)
..+
T Consensus 463 ~~L 465 (788)
T PRK15387 463 QAL 465 (788)
T ss_pred HHH
Confidence 554
No 16
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.68 E-value=1.2e-15 Score=150.42 Aligned_cols=130 Identities=24% Similarity=0.373 Sum_probs=65.4
Q ss_pred HhhhccCccCEEEeecCCC------C-cCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccc
Q psy3567 47 RHFETAKKTGVINLSHQGF------K-EFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDI 119 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i------~-~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 119 (277)
.+|..+++|+.|.+..+.. . .+|+++..++.+|+.|.+.++++..+|..+ ...+|++|++.++.+..+|..+
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~ 630 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGV 630 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCcccccccccc
Confidence 4566677777776655422 1 455555555455666666666665555554 3455555555555555555555
Q ss_pred cCcccCceeeccccc-ccccchhhhcCCCCCEEEccCCC-CccCccccCCCCCCCEEEccC
Q psy3567 120 GTLEKLENVSGNCNL-IKELPLSFSKLHNLKHLSLSQNQ-LNKFPTVLFNLQHLDVLDLSF 178 (277)
Q Consensus 120 ~~l~~L~~L~l~~n~-~~~l~~~~~~l~~L~~L~l~~n~-l~~~~~~l~~~~~L~~L~l~~ 178 (277)
..+++|++++++++. +..+| .++.+++|++|++++|. +..+|..+..+++|+.|++++
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSR 690 (1153)
T ss_pred ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCC
Confidence 555555555554432 22333 23344444444444432 223344444444444444443
No 17
>KOG0532|consensus
Probab=99.65 E-value=5.2e-18 Score=147.80 Aligned_cols=176 Identities=26% Similarity=0.424 Sum_probs=163.8
Q ss_pred hccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceee
Q psy3567 50 ETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVS 129 (277)
Q Consensus 50 ~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~ 129 (277)
..+......|++.|++.++|..+..+ ..|..+.+..|.+..+|..++++..|++++++.|++..+|..++.++ |+.+.
T Consensus 72 ~~ltdt~~aDlsrNR~~elp~~~~~f-~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFSELPEEACAF-VSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccccchhhhhccccccccCchHHHHH-HHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEE
Confidence 34555678999999999999887776 78999999999999999999999999999999999999998887776 99999
Q ss_pred cccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcC
Q psy3567 130 GNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPD 209 (277)
Q Consensus 130 l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~ 209 (277)
+++|++..+|..++...+|..||.+.|.+..+|..++.+.+|+.|.+.+|++..+|.....++|..||+++|+++.||.+
T Consensus 150 ~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis~iPv~ 229 (722)
T KOG0532|consen 150 VSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKISYLPVD 229 (722)
T ss_pred EecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCceeecchh
Confidence 99999999999999889999999999999999999999999999999999999999999988999999999999999999
Q ss_pred ccCCCCCCEEEcCCCccc
Q psy3567 210 ISECVRLKILRLEENCLA 227 (277)
Q Consensus 210 l~~~~~L~~L~l~~n~~~ 227 (277)
|.+|+.|++|-|.+|+++
T Consensus 230 fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhhhhheeeeeccCCCC
Confidence 999999999999999997
No 18
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.64 E-value=9.1e-15 Score=144.30 Aligned_cols=229 Identities=23% Similarity=0.315 Sum_probs=136.2
Q ss_pred CCceeEecCCCCcCCCCC-----CceeeeccCCcc---hhHhhhccCccCEEEeecCC-CCcCChhHHHhhccccEEEcc
Q psy3567 15 PSKLTLLLPGKKNRGLIE-----GTIFVLKMGNSA---TKRHFETAKKTGVINLSHQG-FKEFPDEMNELKAVLRTLDIS 85 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~~~-----~~~~~l~~~~~~---~~~~l~~~~~L~~L~l~~~~-i~~~~~~~~~~~~~L~~L~l~ 85 (277)
.++.+|+++++.+...+. ..+..+.+..+. ..+.++.+++|++|++++|. +..+|..+..+ ++|+.|+++
T Consensus 611 ~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L-~~L~~L~L~ 689 (1153)
T PLN03210 611 ENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYL-NKLEDLDMS 689 (1153)
T ss_pred cCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhcc-CCCCEEeCC
Confidence 466777777776643321 233444444321 11346667777777777763 55777666655 677777777
Q ss_pred CC-CCCcCCccccccCCCcEEeccCC---------------------cCcccCccc------------------------
Q psy3567 86 QN-KISKFPLDLASYQLLKSLTFDQN---------------------KIESLPKDI------------------------ 119 (277)
Q Consensus 86 ~~-~i~~~~~~~~~l~~L~~L~l~~~---------------------~i~~~~~~~------------------------ 119 (277)
+| .+..+|..+ ++++|++|++++| .+..+|..+
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~ 768 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQP 768 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccc
Confidence 75 345555543 4555555555544 333333221
Q ss_pred ------cCcccCceeeccccc-ccccchhhhcCCCCCEEEccCC-CCccCccccCCCCCCCEEEccCC-CCcccCchhcc
Q psy3567 120 ------GTLEKLENVSGNCNL-IKELPLSFSKLHNLKHLSLSQN-QLNKFPTVLFNLQHLDVLDLSFN-RIESIPDGIGK 190 (277)
Q Consensus 120 ------~~l~~L~~L~l~~n~-~~~l~~~~~~l~~L~~L~l~~n-~l~~~~~~l~~~~~L~~L~l~~n-~l~~l~~~~~~ 190 (277)
...++|+.|++++|. +..+|..++.+++|+.|++++| .+..+|... .+++|+.|++++| .+..+|...
T Consensus 769 l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~-- 845 (1153)
T PLN03210 769 LTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDIS-- 845 (1153)
T ss_pred cchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccc--
Confidence 011244455554443 2345656666666666666654 344555443 4566666666665 333444321
Q ss_pred ceeeEEEccCCccCcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCC
Q psy3567 191 MKVIEMNLNKNQICHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGN 249 (277)
Q Consensus 191 ~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n 249 (277)
..+++|++++|.++.+|.++..+++|+.|++++|.-. ..+|..+..+++|+.++++++
T Consensus 846 ~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L-~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 846 TNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNL-QRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCc-CccCcccccccCCCeeecCCC
Confidence 1467788888888888888888888888888885433 367777777888888888876
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.63 E-value=3.8e-16 Score=133.78 Aligned_cols=235 Identities=21% Similarity=0.256 Sum_probs=151.2
Q ss_pred CCCceeEecCCCCcCCCCCCceeeeccCCcchhHhhhccCccCEEEeecCCCCcCC-------hhHHHhhccccEEEccC
Q psy3567 14 SPSKLTLLLPGKKNRGLIEGTIFVLKMGNSATKRHFETAKKTGVINLSHQGFKEFP-------DEMNELKAVLRTLDISQ 86 (277)
Q Consensus 14 ~~~l~~l~l~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~-------~~~~~~~~~L~~L~l~~ 86 (277)
...+++++++++.++..-.. .+...+...+.+++++++++.+...+ ..+.. .++|+.|++++
T Consensus 22 l~~L~~l~l~~~~l~~~~~~----------~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~-~~~L~~L~l~~ 90 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAK----------ALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTK-GCGLQELDLSD 90 (319)
T ss_pred HhhccEEeecCCCCcHHHHH----------HHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHh-cCceeEEEccC
Confidence 34466777777766532111 12345666777888888888766322 22333 36888888888
Q ss_pred CCCCc-CCccccccCC---CcEEeccCCcCcc-----cCccccCc-ccCceeeccccccc-----ccchhhhcCCCCCEE
Q psy3567 87 NKISK-FPLDLASYQL---LKSLTFDQNKIES-----LPKDIGTL-EKLENVSGNCNLIK-----ELPLSFSKLHNLKHL 151 (277)
Q Consensus 87 ~~i~~-~~~~~~~l~~---L~~L~l~~~~i~~-----~~~~~~~l-~~L~~L~l~~n~~~-----~l~~~~~~l~~L~~L 151 (277)
|.+.. .+..+..+.. |++|++++|++.. +...+..+ ++|+.+++++|.+. .++..+..+.+|++|
T Consensus 91 ~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L 170 (319)
T cd00116 91 NALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKEL 170 (319)
T ss_pred CCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEE
Confidence 88763 3334444444 8888888888762 23345566 78888888888876 234456677788888
Q ss_pred EccCCCCc-----cCccccCCCCCCCEEEccCCCCcc-----cCchhccc-eeeEEEccCCccCcC-----CcCc-cCCC
Q psy3567 152 SLSQNQLN-----KFPTVLFNLQHLDVLDLSFNRIES-----IPDGIGKM-KVIEMNLNKNQICHI-----SPDI-SECV 214 (277)
Q Consensus 152 ~l~~n~l~-----~~~~~l~~~~~L~~L~l~~n~l~~-----l~~~~~~~-~l~~L~l~~n~l~~l-----~~~l-~~~~ 214 (277)
++++|.+. .++..+...++|++|++++|.++. ++..+... ++++|++++|.++.. ...+ ...+
T Consensus 171 ~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~ 250 (319)
T cd00116 171 NLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNI 250 (319)
T ss_pred ECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCC
Confidence 88888877 233445556788888888888762 22233333 488888888887731 1111 1236
Q ss_pred CCCEEEcCCCcccc---CccCccccCCCCccEEEcCCCeeeecccccc
Q psy3567 215 RLKILRLEENCLAI---NAIPTCILTSSNVCTLNVEGNLFEMKAFQQL 259 (277)
Q Consensus 215 ~L~~L~l~~n~~~~---~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~l 259 (277)
.|++|++++|.++. ..+...+..+++|+++++++|.++.+..+.+
T Consensus 251 ~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 251 SLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred CceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 88899998888852 2333455566788899999998886644433
No 20
>KOG4237|consensus
Probab=99.62 E-value=3.5e-17 Score=137.06 Aligned_cols=222 Identities=24% Similarity=0.331 Sum_probs=143.4
Q ss_pred CCceeeeccCCcchh----HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccC-CCCCcCCcc-ccccCCCcEE
Q psy3567 32 EGTIFVLKMGNSATK----RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQ-NKISKFPLD-LASYQLLKSL 105 (277)
Q Consensus 32 ~~~~~~l~~~~~~~~----~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~-~~i~~~~~~-~~~l~~L~~L 105 (277)
|+++..+.+..+.+. ++|+.+++|+.|||++|.|+.+.+..|+....+..|.+.+ |+|+.+|.. |.++..++.|
T Consensus 66 P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 66 PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 444444444444332 6677777777777777777777666666556665554444 677766653 5556555555
Q ss_pred eccCCcCccc-CccccCcccCceeecccccccccch-hhhcCCCCCEEEccCCCC-------------------------
Q psy3567 106 TFDQNKIESL-PKDIGTLEKLENVSGNCNLIKELPL-SFSKLHNLKHLSLSQNQL------------------------- 158 (277)
Q Consensus 106 ~l~~~~i~~~-~~~~~~l~~L~~L~l~~n~~~~l~~-~~~~l~~L~~L~l~~n~l------------------------- 158 (277)
.+.-|.+.-+ ...++.++++..|.+..|.+..++. .|..+..++++.++.|.+
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 5555555433 2245555555555555555554443 344444444444433321
Q ss_pred ------------------------------------ccC-c-cccCCCCCCCEEEccCCCCcccCchhcc-c-eeeEEEc
Q psy3567 159 ------------------------------------NKF-P-TVLFNLQHLDVLDLSFNRIESIPDGIGK-M-KVIEMNL 198 (277)
Q Consensus 159 ------------------------------------~~~-~-~~l~~~~~L~~L~l~~n~l~~l~~~~~~-~-~l~~L~l 198 (277)
..+ | ..+..+++|+++++++|+++.+.+..+. . .+++|.+
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 000 1 1245688999999999999987655443 2 5889999
Q ss_pred cCCccCcCCcC-ccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeeeec
Q psy3567 199 NKNQICHISPD-ISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEMK 254 (277)
Q Consensus 199 ~~n~l~~l~~~-l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~~ 254 (277)
..|++..+... |..+..|+.|+|.+|+|+ ...|..|....+|.+|++-+|+|...
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it-~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQIT-TVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeE-EEecccccccceeeeeehccCcccCc
Confidence 99999887764 778889999999999998 56777888888999999999988753
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.61 E-value=2.4e-16 Score=135.00 Aligned_cols=206 Identities=19% Similarity=0.234 Sum_probs=151.9
Q ss_pred HhhhccCccCEEEeecCCCC-----cCChhHHHhhccccEEEccCCCCCc-------CCccccccCCCcEEeccCCcCcc
Q psy3567 47 RHFETAKKTGVINLSHQGFK-----EFPDEMNELKAVLRTLDISQNKISK-------FPLDLASYQLLKSLTFDQNKIES 114 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~-----~~~~~~~~~~~~L~~L~l~~~~i~~-------~~~~~~~l~~L~~L~l~~~~i~~ 114 (277)
..+..++.|+.++++++.++ .+++.+... +.+++++++++.+.. ++..+..+++|++|++++|.+..
T Consensus 17 ~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~-~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 17 ELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQ-PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhC-CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 45677788999999999985 344444444 679999999987763 23446778899999999999873
Q ss_pred -cCccccCcc---cCceeecccccccc-----cchhhhcC-CCCCEEEccCCCCc-----cCccccCCCCCCCEEEccCC
Q psy3567 115 -LPKDIGTLE---KLENVSGNCNLIKE-----LPLSFSKL-HNLKHLSLSQNQLN-----KFPTVLFNLQHLDVLDLSFN 179 (277)
Q Consensus 115 -~~~~~~~l~---~L~~L~l~~n~~~~-----l~~~~~~l-~~L~~L~l~~n~l~-----~~~~~l~~~~~L~~L~l~~n 179 (277)
.+..+..+. +|++|++++|.+.. +...+..+ ++|+.+++++|.++ .++..+..+++|++|++++|
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 333444444 49999999998872 33456677 89999999999988 33445556789999999999
Q ss_pred CCcc-----cCchhccc-eeeEEEccCCccC-----cCCcCccCCCCCCEEEcCCCccccCccCccccC----CCCccEE
Q psy3567 180 RIES-----IPDGIGKM-KVIEMNLNKNQIC-----HISPDISECVRLKILRLEENCLAINAIPTCILT----SSNVCTL 244 (277)
Q Consensus 180 ~l~~-----l~~~~~~~-~l~~L~l~~n~l~-----~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~----~~~L~~l 244 (277)
.++. ++..+... .+++|++++|.++ .+...+..+++|++|++++|.++...+...... .+.|++|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 9872 22223322 4899999999987 344557778999999999999873222221122 3789999
Q ss_pred EcCCCeeee
Q psy3567 245 NVEGNLFEM 253 (277)
Q Consensus 245 ~l~~n~~~~ 253 (277)
++++|.++.
T Consensus 256 ~l~~n~i~~ 264 (319)
T cd00116 256 SLSCNDITD 264 (319)
T ss_pred EccCCCCCc
Confidence 999999873
No 22
>KOG0618|consensus
Probab=99.60 E-value=3.2e-17 Score=149.86 Aligned_cols=196 Identities=22% Similarity=0.329 Sum_probs=141.6
Q ss_pred ccCccCEEEeecCCCCcCChhHHHhhcc-ccEEEccCCCCCcCCcc-ccccCCCcEEeccCCcCc-ccCccccCcccCce
Q psy3567 51 TAKKTGVINLSHQGFKEFPDEMNELKAV-LRTLDISQNKISKFPLD-LASYQLLKSLTFDQNKIE-SLPKDIGTLEKLEN 127 (277)
Q Consensus 51 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~-L~~L~l~~~~i~~~~~~-~~~l~~L~~L~l~~~~i~-~~~~~~~~l~~L~~ 127 (277)
..+.|++|+|..|++.++|+.++..... ++.|..+.+.++..|.. =..++.|+.|++.+|.++ ...+.+.+++.|+.
T Consensus 308 ~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKV 387 (1081)
T KOG0618|consen 308 GLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKV 387 (1081)
T ss_pred ccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceee
Confidence 3444455555555555555443333222 44444444444444421 223466788888888887 45677889999999
Q ss_pred eecccccccccch-hhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccc-eeeEEEccCCccCc
Q psy3567 128 VSGNCNLIKELPL-SFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKM-KVIEMNLNKNQICH 205 (277)
Q Consensus 128 L~l~~n~~~~l~~-~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~-~l~~L~l~~n~l~~ 205 (277)
|+++.|++..+|+ .+.+++.|++|++++|++..+|..+..+..|++|...+|.+..+| .+..+ .++.+|++.|+++.
T Consensus 388 LhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 388 LHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred eeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhh
Confidence 9999999999986 489999999999999999999999999999999999999999999 45555 59999999999994
Q ss_pred C--CcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCC
Q psy3567 206 I--SPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGN 249 (277)
Q Consensus 206 l--~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n 249 (277)
+ +.... .++|++||++||.-. ..-...+..++++..+++.-+
T Consensus 467 ~~l~~~~p-~p~LkyLdlSGN~~l-~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 467 VTLPEALP-SPNLKYLDLSGNTRL-VFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhhhCC-CcccceeeccCCccc-ccchhhhHHhhhhhheecccC
Confidence 4 33332 289999999999733 122345666777777777666
No 23
>KOG0532|consensus
Probab=99.58 E-value=4.1e-17 Score=142.30 Aligned_cols=204 Identities=27% Similarity=0.407 Sum_probs=182.0
Q ss_pred hHhhhccCccCEEEeecCCCCcCChhHHHh-hccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCccc
Q psy3567 46 KRHFETAKKTGVINLSHQGFKEFPDEMNEL-KAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEK 124 (277)
Q Consensus 46 ~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~-~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~ 124 (277)
...+.....-.+|.|++.+++++|..-+.. .......+++.|++..+|..++.+..|+.+.++.|.+..+|.+++.+..
T Consensus 43 ~r~leeA~~sg~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~ 122 (722)
T KOG0532|consen 43 ERALEEAEYSGRLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEA 122 (722)
T ss_pred hHHHHHHhhhcccccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhH
Confidence 356666667788999999999888654442 3556678999999999999999999999999999999999999999999
Q ss_pred CceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccc-eeeEEEccCCcc
Q psy3567 125 LENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKM-KVIEMNLNKNQI 203 (277)
Q Consensus 125 L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~-~l~~L~l~~n~l 203 (277)
|.+++++.|.+..+|..+..++ |+.|.+++|+++.+|..++....|..|+.+.|.+..+|..++.+ +++.+.+..|++
T Consensus 123 lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l 201 (722)
T KOG0532|consen 123 LTFLDLSSNQLSHLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHL 201 (722)
T ss_pred HHHhhhccchhhcCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhh
Confidence 9999999999999998776665 88899999999999999998899999999999999999988776 589999999999
Q ss_pred CcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeeee
Q psy3567 204 CHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 204 ~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~ 253 (277)
..+|..+. .-.|..||++.|++. .+|.+|.+|..|++|-|.+|++..
T Consensus 202 ~~lp~El~-~LpLi~lDfScNkis--~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 202 EDLPEELC-SLPLIRLDFSCNKIS--YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hhCCHHHh-CCceeeeecccCcee--ecchhhhhhhhheeeeeccCCCCC
Confidence 99999988 567999999999998 899999999999999999998874
No 24
>KOG4237|consensus
Probab=99.54 E-value=6.6e-16 Score=129.49 Aligned_cols=127 Identities=30% Similarity=0.355 Sum_probs=95.8
Q ss_pred ccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcC-CccccccCCCcEEeccC-CcCcccCc-cccCcccCceeec
Q psy3567 54 KTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKF-PLDLASYQLLKSLTFDQ-NKIESLPK-DIGTLEKLENVSG 130 (277)
Q Consensus 54 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~-~~~~~~l~~L~~L~l~~-~~i~~~~~-~~~~l~~L~~L~l 130 (277)
..+.++|..|.|+.+|++.|+-.++|+.|++++|+|+.+ |..|..+..+..|.+.+ |+|+.+|+ .|+++..++.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 446688888888888888887778888888888888866 44688888877766655 78888876 6778888888888
Q ss_pred ccccccccc-hhhhcCCCCCEEEccCCCCccCcc-ccCCCCCCCEEEccCCC
Q psy3567 131 NCNLIKELP-LSFSKLHNLKHLSLSQNQLNKFPT-VLFNLQHLDVLDLSFNR 180 (277)
Q Consensus 131 ~~n~~~~l~-~~~~~l~~L~~L~l~~n~l~~~~~-~l~~~~~L~~L~l~~n~ 180 (277)
.-|.+.-++ ..|..++++..|.+.+|.+..++. .+..+..++++.+..|.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 888877665 457888888888888888777765 44456677777666554
No 25
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.47 E-value=1.1e-13 Score=122.21 Aligned_cols=192 Identities=29% Similarity=0.454 Sum_probs=136.2
Q ss_pred EEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccC-CCcEEeccCCcCcccCccccCcccCceeecccccc
Q psy3567 57 VINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQ-LLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLI 135 (277)
Q Consensus 57 ~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~-~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~ 135 (277)
.+++.++.+..-...+... +.++.|++.++++..+++....+. +|+.|++++|.+..++..++.+++|+.|+++.|.+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~-~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l 175 (394)
T COG4886 97 SLDLNLNRLRSNISELLEL-TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDL 175 (394)
T ss_pred eeeccccccccCchhhhcc-cceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchh
Confidence 4677777664333344444 567778888888877777766664 78888888888877777777788888888888888
Q ss_pred cccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccCcCCcCccCCC
Q psy3567 136 KELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQICHISPDISECV 214 (277)
Q Consensus 136 ~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~l~~~~ 214 (277)
..++...+..+.|+.|++++|++..+|........|+++.+++|.+...+..+...+ +..+.+.+|++..++..++.++
T Consensus 176 ~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~ 255 (394)
T COG4886 176 SDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLS 255 (394)
T ss_pred hhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhcccc
Confidence 877766667777888888888888777655555567778888776555555554443 6666677777777777777777
Q ss_pred CCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 215 RLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 215 ~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
+++.|++++|.++ .++. +....+++.+++++|.+.
T Consensus 256 ~l~~L~~s~n~i~--~i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 256 NLETLDLSNNQIS--SISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccceecccccccc--cccc-ccccCccCEEeccCcccc
Confidence 7888888888776 4444 667777888888877665
No 26
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.2e-13 Score=122.05 Aligned_cols=179 Identities=31% Similarity=0.483 Sum_probs=158.1
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhc-cccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccC
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKA-VLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKL 125 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~-~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L 125 (277)
..+...+.++.+++.++.++.+++..... . +|+.|++++|++..+|..+..++.|+.|++++|.+..++......+.|
T Consensus 110 ~~~~~~~~l~~L~l~~n~i~~i~~~~~~~-~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L 188 (394)
T COG4886 110 SELLELTNLTSLDLDNNNITDIPPLIGLL-KSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNL 188 (394)
T ss_pred hhhhcccceeEEecCCcccccCccccccc-hhhcccccccccchhhhhhhhhccccccccccCCchhhhhhhhhhhhhhh
Confidence 44555578999999999999999876654 4 899999999999999888899999999999999999998887789999
Q ss_pred ceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccce-eeEEEccCCccC
Q psy3567 126 ENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQIC 204 (277)
Q Consensus 126 ~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~ 204 (277)
+.+++++|.+..+|........|+++.+++|.....+..+..+.++..+.+..|++..++..++.+. ++++++++|+++
T Consensus 189 ~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 189 NNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred hheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhccccccceecccccccc
Confidence 9999999999999977667778999999999777777788888999999999999888777777775 999999999999
Q ss_pred cCCcCccCCCCCCEEEcCCCccc
Q psy3567 205 HISPDISECVRLKILRLEENCLA 227 (277)
Q Consensus 205 ~l~~~l~~~~~L~~L~l~~n~~~ 227 (277)
.++. ++...+++.+++++|.+.
T Consensus 269 ~i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 269 SISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred cccc-ccccCccCEEeccCcccc
Confidence 9988 888899999999999876
No 27
>KOG1259|consensus
Probab=99.27 E-value=2.5e-12 Score=105.00 Aligned_cols=204 Identities=21% Similarity=0.211 Sum_probs=114.1
Q ss_pred HhhhccCccCEEEeecC-------CCC--cCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCccc--
Q psy3567 47 RHFETAKKTGVINLSHQ-------GFK--EFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESL-- 115 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~-------~i~--~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~-- 115 (277)
..+.-+.+|+.|-.++. +|. .+|..+... .+|..+.+++|.-..+..-...-|-|+.+...+..+...
T Consensus 176 hildf~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f-~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~ 254 (490)
T KOG1259|consen 176 HVLDFCTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAF-RNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPS 254 (490)
T ss_pred HHHHhhhheeEEEecCCCCCCccccccccccccchHHh-hhhheeeeeccchhheeceeecCchhheeeeeccccccccc
Confidence 34455566666665553 222 333333333 556666666665443333333334455555544443311
Q ss_pred --Cc--------------------cccCcccCceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCE
Q psy3567 116 --PK--------------------DIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDV 173 (277)
Q Consensus 116 --~~--------------------~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~ 173 (277)
|. ....+..|+++|+++|.+..+-.+..-+++++.|++++|.+..+.. +..+++|+.
T Consensus 255 l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~ 333 (490)
T KOG1259|consen 255 LLPETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQL 333 (490)
T ss_pred ccchhhhcCccCCCCCccCCceEEecchHhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehh-hhhcccceE
Confidence 10 1223445667777777777666666666777777777777766643 556677777
Q ss_pred EEccCCCCcccCchhccc-eeeEEEccCCccCcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 174 LDLSFNRIESIPDGIGKM-KVIEMNLNKNQICHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 174 L~l~~n~l~~l~~~~~~~-~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
||+++|.++.+..|-..+ ++.+|.++.|.|..+. .++.+-+|..||+++|+|.-..-...++++|-|+.+.|.+|++.
T Consensus 334 LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 334 LDLSGNLLAECVGWHLKLGNIKTLKLAQNKIETLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eecccchhHhhhhhHhhhcCEeeeehhhhhHhhhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 777777776665554433 3666667766666553 24455566677777776652222244566666666667776665
Q ss_pred e
Q psy3567 253 M 253 (277)
Q Consensus 253 ~ 253 (277)
.
T Consensus 413 ~ 413 (490)
T KOG1259|consen 413 G 413 (490)
T ss_pred c
Confidence 3
No 28
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=6.9e-12 Score=97.05 Aligned_cols=127 Identities=30% Similarity=0.412 Sum_probs=41.8
Q ss_pred cCceeecccccccccchhhh-cCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhc-cc-eeeEEEccC
Q psy3567 124 KLENVSGNCNLIKELPLSFS-KLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIG-KM-KVIEMNLNK 200 (277)
Q Consensus 124 ~L~~L~l~~n~~~~l~~~~~-~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~-~~-~l~~L~l~~ 200 (277)
++++|++.+|.+..+. .++ .+.+|+.|++++|.+.+++ .+..++.|++|++++|.++.++..+. .+ .+++|++++
T Consensus 20 ~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~ 97 (175)
T PF14580_consen 20 KLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSN 97 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-TT
T ss_pred cccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcC
Confidence 3444555555544442 222 3455566666666665553 34455666666666666665544332 22 366666666
Q ss_pred CccCcCCc--CccCCCCCCEEEcCCCccccCccC--ccccCCCCccEEEcCCCeeeec
Q psy3567 201 NQICHISP--DISECVRLKILRLEENCLAINAIP--TCILTSSNVCTLNVEGNLFEMK 254 (277)
Q Consensus 201 n~l~~l~~--~l~~~~~L~~L~l~~n~~~~~~~~--~~~~~~~~L~~l~l~~n~~~~~ 254 (277)
|+|..+.. .+..+++|++|++.+|++....-. ..+..+|+|+.|| +..++.+
T Consensus 98 N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD--~~~V~~~ 153 (175)
T PF14580_consen 98 NKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD--GQDVTEE 153 (175)
T ss_dssp S---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET--TEETTS-
T ss_pred CcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC--CEEccHH
Confidence 66665443 366788899999999988722111 1356678888864 4444443
No 29
>KOG1909|consensus
Probab=99.26 E-value=2.4e-13 Score=112.58 Aligned_cols=229 Identities=23% Similarity=0.278 Sum_probs=145.1
Q ss_pred CCCceeEecCCCCcCCCCCCceeeeccCCcchhHhhhccCccCEEEeecCCCC----cCChhHHHh------hccccEEE
Q psy3567 14 SPSKLTLLLPGKKNRGLIEGTIFVLKMGNSATKRHFETAKKTGVINLSHQGFK----EFPDEMNEL------KAVLRTLD 83 (277)
Q Consensus 14 ~~~l~~l~l~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~L~~L~l~~~~i~----~~~~~~~~~------~~~L~~L~ 83 (277)
...++.++|+||.+.-.-...+ .+.+.+-++|+..++++-.-. ++|+.+.-+ +++|++++
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i----------~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ld 98 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAI----------AKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLD 98 (382)
T ss_pred cCceEEEeccCCchhHHHHHHH----------HHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEee
Confidence 4577889999998765533332 245666677777777764222 455433222 25778888
Q ss_pred ccCCCCC-cCCc----cccccCCCcEEeccCCcCccc--------------CccccCcccCceeeccccccccc-----c
Q psy3567 84 ISQNKIS-KFPL----DLASYQLLKSLTFDQNKIESL--------------PKDIGTLEKLENVSGNCNLIKEL-----P 139 (277)
Q Consensus 84 l~~~~i~-~~~~----~~~~l~~L~~L~l~~~~i~~~--------------~~~~~~l~~L~~L~l~~n~~~~l-----~ 139 (277)
|++|-+. .-++ -++++..|++|.+.+|.+... .+..+.-+.|+.+..++|++..- .
T Consensus 99 LSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 99 LSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred ccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHH
Confidence 8887766 2222 255677788888888777522 12234556677888888877643 3
Q ss_pred hhhhcCCCCCEEEccCCCCcc-----CccccCCCCCCCEEEccCCCCc-----ccCchhccce-eeEEEccCCccC----
Q psy3567 140 LSFSKLHNLKHLSLSQNQLNK-----FPTVLFNLQHLDVLDLSFNRIE-----SIPDGIGKMK-VIEMNLNKNQIC---- 204 (277)
Q Consensus 140 ~~~~~l~~L~~L~l~~n~l~~-----~~~~l~~~~~L~~L~l~~n~l~-----~l~~~~~~~~-l~~L~l~~n~l~---- 204 (277)
..|...+.|+.+.+..|.+.. +..++..++.|+.|++.+|.++ .+...+..++ ++++++++|.+.
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga 258 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGA 258 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccH
Confidence 346666778888887777651 2345567788888888888776 2334444444 778888888776
Q ss_pred -cCCcCc-cCCCCCCEEEcCCCccccC---ccCccccCCCCccEEEcCCCeee
Q psy3567 205 -HISPDI-SECVRLKILRLEENCLAIN---AIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 205 -~l~~~l-~~~~~L~~L~l~~n~~~~~---~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
.+...+ ...|+|..+.+.+|.++.. .+..++...+.|.+|+|++|.+.
T Consensus 259 ~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 259 IAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 232332 2357888888888887621 23334556778888888888883
No 30
>KOG3207|consensus
Probab=99.23 E-value=1.7e-12 Score=110.54 Aligned_cols=63 Identities=21% Similarity=0.247 Sum_probs=26.7
Q ss_pred ccCccCEEEeecCCCCcCCh-hHHHhhccccEEEccCCCCCc---CCccccccCCCcEEeccCCcCc
Q psy3567 51 TAKKTGVINLSHQGFKEFPD-EMNELKAVLRTLDISQNKISK---FPLDLASYQLLKSLTFDQNKIE 113 (277)
Q Consensus 51 ~~~~L~~L~l~~~~i~~~~~-~~~~~~~~L~~L~l~~~~i~~---~~~~~~~l~~L~~L~l~~~~i~ 113 (277)
++++|+.+.|.++.+...+. ...+.+++++.|++++|-+.. +.....++++|+.|+++.|++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~ 185 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLS 185 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccccc
Confidence 34444555555555443331 122223555555555543331 1112234455555555555443
No 31
>KOG1259|consensus
Probab=99.23 E-value=1.3e-12 Score=106.51 Aligned_cols=207 Identities=20% Similarity=0.286 Sum_probs=149.2
Q ss_pred hhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCC------------------------ccccccCCCc
Q psy3567 48 HFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFP------------------------LDLASYQLLK 103 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~------------------------~~~~~l~~L~ 103 (277)
.+.-+++|+.+.++.+.-.++..-... .|.|+++..++..++..| ..+.-.+-|+
T Consensus 209 ~l~~f~~l~~~~~s~~~~~~i~~~~~~-kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Lt 287 (490)
T KOG1259|consen 209 NLNAFRNLKTLKFSALSTENIVDIELL-KPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQELT 287 (490)
T ss_pred chHHhhhhheeeeeccchhheeceeec-CchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhhh
Confidence 344556666666666654444332222 266777777666554211 0122346689
Q ss_pred EEeccCCcCcccCccccCcccCceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcc
Q psy3567 104 SLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIES 183 (277)
Q Consensus 104 ~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~ 183 (277)
++|++.|.|..+.++..-.+.++.|+++.|++..+.. +..+++|+.||+++|.++++..+-..+.+.++|.++.|.+..
T Consensus 288 elDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE~ 366 (490)
T KOG1259|consen 288 ELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNKIET 366 (490)
T ss_pred hccccccchhhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhhHhh
Confidence 9999999999999999999999999999999998754 888999999999999999886655578899999999999886
Q ss_pred cCchhccc-eeeEEEccCCccCcCCc--CccCCCCCCEEEcCCCccccCccCcccc----CC-CCccEEEcCCCeeeecc
Q psy3567 184 IPDGIGKM-KVIEMNLNKNQICHISP--DISECVRLKILRLEENCLAINAIPTCIL----TS-SNVCTLNVEGNLFEMKA 255 (277)
Q Consensus 184 l~~~~~~~-~l~~L~l~~n~l~~l~~--~l~~~~~L~~L~l~~n~~~~~~~~~~~~----~~-~~L~~l~l~~n~~~~~~ 255 (277)
+.. ++.+ ++..||+.+|+|..+.. .++++|.|.++.|.+|++. .+++.-. .+ ..-.++.|.+-.-+..+
T Consensus 367 LSG-L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~--~~vdYRTKVLa~FGERaSE~~LD~~~~~~~E 443 (490)
T KOG1259|consen 367 LSG-LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA--GSVDYRTKVLARFGERASEISLDNEPGNQQE 443 (490)
T ss_pred hhh-hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc--ccchHHHHHHHHHhhhhhheecCCCCcchhh
Confidence 654 3333 58899999999997764 4899999999999999997 4554322 22 23345666665555444
Q ss_pred cccc
Q psy3567 256 FQQL 259 (277)
Q Consensus 256 ~~~l 259 (277)
+..+
T Consensus 444 LDTV 447 (490)
T KOG1259|consen 444 LDTV 447 (490)
T ss_pred hhHH
Confidence 4443
No 32
>KOG1909|consensus
Probab=99.21 E-value=1.3e-12 Score=108.35 Aligned_cols=180 Identities=22% Similarity=0.237 Sum_probs=91.2
Q ss_pred HhhhccCccCEEEeecCCCC-cCChhHHHh---hccccEEEccCCCCCcCCc--------------cccccCCCcEEecc
Q psy3567 47 RHFETAKKTGVINLSHQGFK-EFPDEMNEL---KAVLRTLDISQNKISKFPL--------------DLASYQLLKSLTFD 108 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~-~~~~~~~~~---~~~L~~L~l~~~~i~~~~~--------------~~~~l~~L~~L~l~ 108 (277)
+++..+++|++++|++|.|. ..++.+..+ +..|++|.+.+|.+..... -...-+.|+.+...
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~ 165 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICG 165 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEee
Confidence 45555566666666666555 222211111 3556666666665542111 12233556666666
Q ss_pred CCcCccc-----CccccCcccCceeecccccccc-----cchhhhcCCCCCEEEccCCCCc-----cCccccCCCCCCCE
Q psy3567 109 QNKIESL-----PKDIGTLEKLENVSGNCNLIKE-----LPLSFSKLHNLKHLSLSQNQLN-----KFPTVLFNLQHLDV 173 (277)
Q Consensus 109 ~~~i~~~-----~~~~~~l~~L~~L~l~~n~~~~-----l~~~~~~l~~L~~L~l~~n~l~-----~~~~~l~~~~~L~~ 173 (277)
+|++..- ...+...+.|+.+.+..|.+.. +...+..+++|+.||+.+|-++ .+...+..|+.|+.
T Consensus 166 rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 166 RNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRE 245 (382)
T ss_pred ccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhee
Confidence 6665522 2334555566666666665541 1234555666666666666555 23344455566666
Q ss_pred EEccCCCCc-----ccCchhcc--ceeeEEEccCCccC-----cCCcCccCCCCCCEEEcCCCcc
Q psy3567 174 LDLSFNRIE-----SIPDGIGK--MKVIEMNLNKNQIC-----HISPDISECVRLKILRLEENCL 226 (277)
Q Consensus 174 L~l~~n~l~-----~l~~~~~~--~~l~~L~l~~n~l~-----~l~~~l~~~~~L~~L~l~~n~~ 226 (277)
+.+++|.+. .+...+.. .++..+.+.+|.|+ .+..++...+.|..|++++|.+
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 666666554 11111211 13556666666665 2333344455666666666665
No 33
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.18 E-value=2.3e-11 Score=94.16 Aligned_cols=111 Identities=26% Similarity=0.311 Sum_probs=44.9
Q ss_pred hhcCCCCCEEEccCCCCccCccccC-CCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcCc-cCCCCCCEE
Q psy3567 142 FSKLHNLKHLSLSQNQLNKFPTVLF-NLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPDI-SECVRLKIL 219 (277)
Q Consensus 142 ~~~l~~L~~L~l~~n~l~~~~~~l~-~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~l-~~~~~L~~L 219 (277)
+.+..++++|++.+|.+..+. .++ .+.+|+.|++++|.++.++..-....+++|++++|+|+.+...+ ..+++|++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccccc-chhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 445567899999999999884 565 58899999999999998765333335999999999999997665 468999999
Q ss_pred EcCCCccccCccCccccCCCCccEEEcCCCeeee
Q psy3567 220 RLEENCLAINAIPTCILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 220 ~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~ 253 (277)
++++|++..-.--..+..+++|+.|++.+|++..
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 9999999733333567889999999999999974
No 34
>KOG3207|consensus
Probab=99.12 E-value=1.3e-11 Score=105.19 Aligned_cols=180 Identities=26% Similarity=0.249 Sum_probs=135.1
Q ss_pred hhhccCccCEEEeecCCCCcCC--hhHHHhhccccEEEccCCCCCcCCcc--ccccCCCcEEeccCCcCc--ccCccccC
Q psy3567 48 HFETAKKTGVINLSHQGFKEFP--DEMNELKAVLRTLDISQNKISKFPLD--LASYQLLKSLTFDQNKIE--SLPKDIGT 121 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~~~~--~~~~~~~~~L~~L~l~~~~i~~~~~~--~~~l~~L~~L~l~~~~i~--~~~~~~~~ 121 (277)
....|+.++.|||++|-|..+- ..+..-+++|+.|+++.|.+.....+ -..+++|+.|.++.|.++ .+-.....
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 5678999999999999777332 12333349999999999988744332 235788999999999998 33345667
Q ss_pred cccCceeeccccccc-ccchhhhcCCCCCEEEccCCCCccCc--cccCCCCCCCEEEccCCCCccc--Cch------hcc
Q psy3567 122 LEKLENVSGNCNLIK-ELPLSFSKLHNLKHLSLSQNQLNKFP--TVLFNLQHLDVLDLSFNRIESI--PDG------IGK 190 (277)
Q Consensus 122 l~~L~~L~l~~n~~~-~l~~~~~~l~~L~~L~l~~n~l~~~~--~~l~~~~~L~~L~l~~n~l~~l--~~~------~~~ 190 (277)
+++++.|++..|... .-.....-+..|+.||+++|++-.++ ...+.++.|..|.++.|+++++ |+. .--
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f 300 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTF 300 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccc
Confidence 899999999988522 22223455678999999999998876 5677899999999999999843 433 112
Q ss_pred ceeeEEEccCCccCcCCc--CccCCCCCCEEEcCCCccc
Q psy3567 191 MKVIEMNLNKNQICHISP--DISECVRLKILRLEENCLA 227 (277)
Q Consensus 191 ~~l~~L~l~~n~l~~l~~--~l~~~~~L~~L~l~~n~~~ 227 (277)
.+++.|++..|++..++. .+..+++|+.+.+..|.++
T Consensus 301 ~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 301 PKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 368899999999987765 3677888999998888886
No 35
>KOG4658|consensus
Probab=99.08 E-value=1.2e-10 Score=110.89 Aligned_cols=225 Identities=20% Similarity=0.278 Sum_probs=126.6
Q ss_pred CcchhhhcC-CCCCCC---CceeEecCCCCcCCCCC-----CceeeeccCCcchh--HhhhccCccCEEEeecCC--CCc
Q psy3567 1 MQVLTEDFG-WDPSSP---SKLTLLLPGKKNRGLIE-----GTIFVLKMGNSATK--RHFETAKKTGVINLSHQG--FKE 67 (277)
Q Consensus 1 ~~~l~~~~~-~~~~~~---~l~~l~l~~~~~~~~~~-----~~~~~l~~~~~~~~--~~l~~~~~L~~L~l~~~~--i~~ 67 (277)
|||+++||+ |+...- ....+--.+.+++. .| .....++..++.+. ..=..++.|++|-+.++. +..
T Consensus 483 mHDvvRe~al~ias~~~~~~e~~iv~~~~~~~~-~~~~~~~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~ 561 (889)
T KOG4658|consen 483 MHDVVREMALWIASDFGKQEENQIVSDGVGLSE-IPQVKSWNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLE 561 (889)
T ss_pred eeHHHHHHHHHHhccccccccceEEECCcCccc-cccccchhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhh
Confidence 899999998 433210 11122222222222 22 12233443333332 122334568888888875 667
Q ss_pred CChhHHHhhccccEEEccCC-CCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccccccc-cchhhhcC
Q psy3567 68 FPDEMNELKAVLRTLDISQN-KISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKE-LPLSFSKL 145 (277)
Q Consensus 68 ~~~~~~~~~~~L~~L~l~~~-~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~-l~~~~~~l 145 (277)
++..++...+.|++||+++| .+..+|..++.+.+|++|+++++.+..+|.+++.+..|.+|++..+.... +|.....+
T Consensus 562 is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L 641 (889)
T KOG4658|consen 562 ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLEL 641 (889)
T ss_pred cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhc
Confidence 77777776688888888876 45688888888888888888888888888888888888888887666543 33445558
Q ss_pred CCCCEEEccCCCCcc---CccccCCCCCCCEEEccCCCC---cccCchhccce-eeEEEccCCccCcCCcCccCCCCCCE
Q psy3567 146 HNLKHLSLSQNQLNK---FPTVLFNLQHLDVLDLSFNRI---ESIPDGIGKMK-VIEMNLNKNQICHISPDISECVRLKI 218 (277)
Q Consensus 146 ~~L~~L~l~~n~l~~---~~~~l~~~~~L~~L~l~~n~l---~~l~~~~~~~~-l~~L~l~~n~l~~l~~~l~~~~~L~~ 218 (277)
.+|++|.+....... .-..+..+..|+.+....... ..+-....... .+.+.+.++.....+..++.+.+|+.
T Consensus 642 ~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~ 721 (889)
T KOG4658|consen 642 QSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEE 721 (889)
T ss_pred ccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcce
Confidence 888888876654221 112223344444444432221 01100000001 11222223334445555666666666
Q ss_pred EEcCCCcc
Q psy3567 219 LRLEENCL 226 (277)
Q Consensus 219 L~l~~n~~ 226 (277)
|.+.++.+
T Consensus 722 L~i~~~~~ 729 (889)
T KOG4658|consen 722 LSILDCGI 729 (889)
T ss_pred EEEEcCCC
Confidence 66666655
No 36
>KOG0531|consensus
Probab=98.92 E-value=8.7e-11 Score=104.36 Aligned_cols=196 Identities=28% Similarity=0.314 Sum_probs=109.6
Q ss_pred ccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeec
Q psy3567 51 TAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSG 130 (277)
Q Consensus 51 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l 130 (277)
.+..++.+.+..+.+..+-..+..+ .+++.|++.+|.|..+...+..+++|++|++++|.|+.+. .+..+..|+.|++
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~-~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKL-KSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELNL 147 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccc-cceeeeeccccchhhcccchhhhhcchheecccccccccc-chhhccchhhhee
Confidence 4455555666666666533223333 6677777777777766655666777777777777776653 3344555777777
Q ss_pred ccccccccchhhhcCCCCCEEEccCCCCccCccc-cCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcC
Q psy3567 131 NCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTV-LFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPD 209 (277)
Q Consensus 131 ~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~-l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~ 209 (277)
.+|.+..+. .+..++.|+.+++++|.+..+... ...+.+++.+.+.+|.+..+...-....+..+++..|.++.+...
T Consensus 148 ~~N~i~~~~-~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~~~~l 226 (414)
T KOG0531|consen 148 SGNLISDIS-GLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISKLEGL 226 (414)
T ss_pred ccCcchhcc-CCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccchHHHHHHHHhhcccccceeccCc
Confidence 777777654 344466777777777777766442 345666777777777665433221111223335555555543221
Q ss_pred ccCCC--CCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 210 ISECV--RLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 210 l~~~~--~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
. ... .|+.+++++|.+. .++..+..+..+..+++.+|.++
T Consensus 227 ~-~~~~~~L~~l~l~~n~i~--~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 227 N-ELVMLHLRELYLSGNRIS--RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred c-cchhHHHHHHhcccCccc--cccccccccccccccchhhcccc
Confidence 1 111 2555666666554 22233444455555555555444
No 37
>KOG1859|consensus
Probab=98.91 E-value=2.5e-11 Score=109.49 Aligned_cols=127 Identities=28% Similarity=0.283 Sum_probs=80.4
Q ss_pred cCceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchh-ccceeeEEEccCCc
Q psy3567 124 KLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGI-GKMKVIEMNLNKNQ 202 (277)
Q Consensus 124 ~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~-~~~~l~~L~l~~n~ 202 (277)
.|...++++|.+..+-.++.-++.++.|++++|++.++. .+..++.|.+||++.|.++.+|.-. ...++..|.+.+|.
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~ 243 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNA 243 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhhheeeeecccH
Confidence 455566666766665556666677777777777777664 5666777777777777777665432 22346677777777
Q ss_pred cCcCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCeee
Q psy3567 203 ICHISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFE 252 (277)
Q Consensus 203 l~~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~ 252 (277)
++.+-. +.++++|..||+++|.+....--..++.+..|+.|+|.||++-
T Consensus 244 l~tL~g-ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 244 LTTLRG-IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHhhhh-HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 776532 4566777777777777652221234555667777777777654
No 38
>KOG2982|consensus
Probab=98.82 E-value=1.4e-09 Score=88.87 Aligned_cols=106 Identities=20% Similarity=0.178 Sum_probs=57.2
Q ss_pred ccCEEEeecCCCCcC--ChhHHHhhccccEEEccCCCCC---cCCccccccCCCcEEeccCCcCcccCccc-cCcccCce
Q psy3567 54 KTGVINLSHQGFKEF--PDEMNELKAVLRTLDISQNKIS---KFPLDLASYQLLKSLTFDQNKIESLPKDI-GTLEKLEN 127 (277)
Q Consensus 54 ~L~~L~l~~~~i~~~--~~~~~~~~~~L~~L~l~~~~i~---~~~~~~~~l~~L~~L~l~~~~i~~~~~~~-~~l~~L~~ 127 (277)
.+..+.+.++.|-.. ...+...++.++.+|+.+|.|+ .+...+.++|.|+.|+++.|.+.....++ ....+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 344555555555422 1223333466666666666665 23333456666666666666665443333 35556666
Q ss_pred eeccccccc--ccchhhhcCCCCCEEEccCCCCc
Q psy3567 128 VSGNCNLIK--ELPLSFSKLHNLKHLSLSQNQLN 159 (277)
Q Consensus 128 L~l~~n~~~--~l~~~~~~l~~L~~L~l~~n~l~ 159 (277)
+.+.+..+. .+...+..+|++++|.++.|++.
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r 159 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR 159 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhh
Confidence 666665554 33444555666666666666443
No 39
>KOG0531|consensus
Probab=98.82 E-value=6.2e-10 Score=98.92 Aligned_cols=176 Identities=25% Similarity=0.344 Sum_probs=111.9
Q ss_pred hhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCce
Q psy3567 48 HFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLEN 127 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~ 127 (277)
.++.++++..+++.+|.|..+...+..+ .+|++|++++|.|+.+.+ +..++.|+.|++.+|.|..+. .+..+..|+.
T Consensus 90 ~l~~~~~l~~l~l~~n~i~~i~~~l~~~-~~L~~L~ls~N~I~~i~~-l~~l~~L~~L~l~~N~i~~~~-~~~~l~~L~~ 166 (414)
T KOG0531|consen 90 HLSKLKSLEALDLYDNKIEKIENLLSSL-VNLQVLDLSFNKITKLEG-LSTLTLLKELNLSGNLISDIS-GLESLKSLKL 166 (414)
T ss_pred ccccccceeeeeccccchhhcccchhhh-hcchheeccccccccccc-hhhccchhhheeccCcchhcc-CCccchhhhc
Confidence 3677788888888888888776544445 788888888888876543 455666888888888887664 3444777888
Q ss_pred eecccccccccchh-hhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccc--eeeEEEccCCccC
Q psy3567 128 VSGNCNLIKELPLS-FSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKM--KVIEMNLNKNQIC 204 (277)
Q Consensus 128 L~l~~n~~~~l~~~-~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~--~l~~L~l~~n~l~ 204 (277)
++++.|.+..+... ...+.+++.+.+.+|.+..+ ..+.....+..+++..|.++.+...-... .++++++.+|++.
T Consensus 167 l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i-~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~ 245 (414)
T KOG0531|consen 167 LDLSYNRIVDIENDELSELISLEELDLGGNSIREI-EGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRIS 245 (414)
T ss_pred ccCCcchhhhhhhhhhhhccchHHHhccCCchhcc-cchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCccc
Confidence 88888888776543 46677777788888776655 22223334444456666555332211111 2556666666666
Q ss_pred cCCcCccCCCCCCEEEcCCCccc
Q psy3567 205 HISPDISECVRLKILRLEENCLA 227 (277)
Q Consensus 205 ~l~~~l~~~~~L~~L~l~~n~~~ 227 (277)
.++..+...+.+..+++..|.+.
T Consensus 246 ~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 246 RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cccccccccccccccchhhcccc
Confidence 55544555566666666666554
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=2.7e-09 Score=68.14 Aligned_cols=58 Identities=24% Similarity=0.394 Sum_probs=33.9
Q ss_pred ccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCc-cccccCCCcEEeccCCc
Q psy3567 54 KTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPL-DLASYQLLKSLTFDQNK 111 (277)
Q Consensus 54 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~-~~~~l~~L~~L~l~~~~ 111 (277)
+|++|++++|+++.+|+..+..+++|++|++++|++..+++ .|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45566666666666665555544666666666666665543 35666666666666554
No 41
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=1.3e-08 Score=64.95 Aligned_cols=58 Identities=26% Similarity=0.415 Sum_probs=46.4
Q ss_pred eeEEEccCCccCcCCcC-ccCCCCCCEEEcCCCccccCccCccccCCCCccEEEcCCCee
Q psy3567 193 VIEMNLNKNQICHISPD-ISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNVEGNLF 251 (277)
Q Consensus 193 l~~L~l~~n~l~~l~~~-l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~ 251 (277)
+++|++++|+++.+|.. +..+++|++|++++|+++ ..-+..+..+++|++|++++|++
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~-~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLT-SIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSES-EEETTTTTTSTTESEEEETSSSB
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccC-ccCHHHHcCCCCCCEEeCcCCcC
Confidence 67788888888888864 778888999999988887 34456788888899999888864
No 42
>KOG4658|consensus
Probab=98.68 E-value=1.3e-08 Score=97.34 Aligned_cols=202 Identities=19% Similarity=0.281 Sum_probs=139.9
Q ss_pred hhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCC--CCcCCcc-ccccCCCcEEeccCC-cCcccCccccCcc
Q psy3567 48 HFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNK--ISKFPLD-LASYQLLKSLTFDQN-KIESLPKDIGTLE 123 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~--i~~~~~~-~~~l~~L~~L~l~~~-~i~~~~~~~~~l~ 123 (277)
...+....+.+.+.++.+..++.... ++.+++|-+..|. +..++.. |..++.|++||+++| .+..+|..++.+.
T Consensus 518 ~~~~~~~~rr~s~~~~~~~~~~~~~~--~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li 595 (889)
T KOG4658|consen 518 QVKSWNSVRRMSLMNNKIEHIAGSSE--NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELV 595 (889)
T ss_pred cccchhheeEEEEeccchhhccCCCC--CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhh
Confidence 34455677899999999987776432 2679999999986 6666664 788999999999977 6778999999999
Q ss_pred cCceeecccccccccchhhhcCCCCCEEEccCCCCc-cCccccCCCCCCCEEEccCCCCc---ccCchhccc-eeeEEEc
Q psy3567 124 KLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLN-KFPTVLFNLQHLDVLDLSFNRIE---SIPDGIGKM-KVIEMNL 198 (277)
Q Consensus 124 ~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~-~~~~~l~~~~~L~~L~l~~n~l~---~l~~~~~~~-~l~~L~l 198 (277)
+|++|+++++.+..+|.++.++.+|.+|++..+... .+|.....+++|++|.+...... ..-..+..+ .|+.+..
T Consensus 596 ~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 596 HLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred hhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 999999999999999999999999999999887654 44555556999999999766532 111222222 1333333
Q ss_pred cCCccCcCCcCccCCCCCC----EEEcCCCccccCccCccccCCCCccEEEcCCCeeeec
Q psy3567 199 NKNQICHISPDISECVRLK----ILRLEENCLAINAIPTCILTSSNVCTLNVEGNLFEMK 254 (277)
Q Consensus 199 ~~n~l~~l~~~l~~~~~L~----~L~l~~n~~~~~~~~~~~~~~~~L~~l~l~~n~~~~~ 254 (277)
..... .+-..+..++.|. .+.+.++.. ...+..+..+.+++.|.+.++.....
T Consensus 676 ~~~s~-~~~e~l~~~~~L~~~~~~l~~~~~~~--~~~~~~~~~l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 676 TISSV-LLLEDLLGMTRLRSLLQSLSIEGCSK--RTLISSLGSLGNLEELSILDCGISEI 732 (889)
T ss_pred ecchh-HhHhhhhhhHHHHHHhHhhhhccccc--ceeecccccccCcceEEEEcCCCchh
Confidence 22222 1112222233322 233222222 24556777888999999999877643
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.67 E-value=5e-08 Score=90.88 Aligned_cols=105 Identities=25% Similarity=0.395 Sum_probs=73.8
Q ss_pred CCEEEccCCCCc-cCccccCCCCCCCEEEccCCCCc-ccCchhccce-eeEEEccCCccC-cCCcCccCCCCCCEEEcCC
Q psy3567 148 LKHLSLSQNQLN-KFPTVLFNLQHLDVLDLSFNRIE-SIPDGIGKMK-VIEMNLNKNQIC-HISPDISECVRLKILRLEE 223 (277)
Q Consensus 148 L~~L~l~~n~l~-~~~~~l~~~~~L~~L~l~~n~l~-~l~~~~~~~~-l~~L~l~~n~l~-~l~~~l~~~~~L~~L~l~~ 223 (277)
++.|++++|.+. .+|..+..+++|+.|++++|.++ .+|..++.++ |+.|++++|+++ .+|..++.+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 566777777776 56667777777777777777776 5666666664 777777777777 5666677777788888877
Q ss_pred CccccCccCccccCC-CCccEEEcCCCeeee
Q psy3567 224 NCLAINAIPTCILTS-SNVCTLNVEGNLFEM 253 (277)
Q Consensus 224 n~~~~~~~~~~~~~~-~~L~~l~l~~n~~~~ 253 (277)
|.++ +.+|..+... .++..+++.+|...+
T Consensus 500 N~l~-g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 500 NSLS-GRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred Cccc-ccCChHHhhccccCceEEecCCcccc
Confidence 7777 6777766543 355667777775433
No 44
>KOG1859|consensus
Probab=98.66 E-value=4.1e-10 Score=101.80 Aligned_cols=126 Identities=25% Similarity=0.347 Sum_probs=103.3
Q ss_pred CCCcEEeccCCcCcccCccccCcccCceeecccccccccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEEEccCC
Q psy3567 100 QLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFN 179 (277)
Q Consensus 100 ~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n 179 (277)
-.|...+++.|++..+..++.-++.++.|+++.|.+..+. .+..+++|++||+++|.+..+|..-..-..|+.|.+++|
T Consensus 164 n~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN 242 (1096)
T KOG1859|consen 164 NKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNN 242 (1096)
T ss_pred hhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhhheeeeeccc
Confidence 4577778888999888889999999999999999998775 788999999999999999988753333345999999999
Q ss_pred CCcccCchhccce-eeEEEccCCccCcCCcC--ccCCCCCCEEEcCCCccc
Q psy3567 180 RIESIPDGIGKMK-VIEMNLNKNQICHISPD--ISECVRLKILRLEENCLA 227 (277)
Q Consensus 180 ~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~--l~~~~~L~~L~l~~n~~~ 227 (277)
.++.+.. +.+++ ++.||+++|-+.....- ++.+..|+.|+|.||++-
T Consensus 243 ~l~tL~g-ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 243 ALTTLRG-IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHHhhhh-HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9886643 34454 88999999988865543 677889999999999885
No 45
>PLN03150 hypothetical protein; Provisional
Probab=98.60 E-value=1.3e-07 Score=88.11 Aligned_cols=104 Identities=27% Similarity=0.467 Sum_probs=86.9
Q ss_pred CCcEEeccCCcCc-ccCccccCcccCceeeccccccc-ccchhhhcCCCCCEEEccCCCCc-cCccccCCCCCCCEEEcc
Q psy3567 101 LLKSLTFDQNKIE-SLPKDIGTLEKLENVSGNCNLIK-ELPLSFSKLHNLKHLSLSQNQLN-KFPTVLFNLQHLDVLDLS 177 (277)
Q Consensus 101 ~L~~L~l~~~~i~-~~~~~~~~l~~L~~L~l~~n~~~-~l~~~~~~l~~L~~L~l~~n~l~-~~~~~l~~~~~L~~L~l~ 177 (277)
.++.|+++++.+. .+|..+..+++|+.|++++|.+. .+|..++.+++|+.|++++|.+. .+|..++.+++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 4788899999887 56788899999999999999887 78888999999999999999988 678888899999999999
Q ss_pred CCCCc-ccCchhccc--eeeEEEccCCccC
Q psy3567 178 FNRIE-SIPDGIGKM--KVIEMNLNKNQIC 204 (277)
Q Consensus 178 ~n~l~-~l~~~~~~~--~l~~L~l~~n~l~ 204 (277)
+|.++ .+|..++.. .+..+++.+|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 99888 678777653 3567888887643
No 46
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.58 E-value=1.6e-08 Score=81.88 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=120.6
Q ss_pred HhhhccCccCEEEeecCCCC-----cCChhHHHhhccccEEEccCCCCC----cC-------CccccccCCCcEEeccCC
Q psy3567 47 RHFETAKKTGVINLSHQGFK-----EFPDEMNELKAVLRTLDISQNKIS----KF-------PLDLASYQLLKSLTFDQN 110 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~-----~~~~~~~~~~~~L~~L~l~~~~i~----~~-------~~~~~~l~~L~~L~l~~~ 110 (277)
..+..+..++.++|++|.|. .+...+..- .+|+...+++--.. .+ .+.+.++|+++.+++++|
T Consensus 24 eel~~~d~~~evdLSGNtigtEA~e~l~~~ia~~-~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDN 102 (388)
T COG5238 24 EELEMMDELVEVDLSGNTIGTEAMEELCNVIANV-RNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDN 102 (388)
T ss_pred HHHHhhcceeEEeccCCcccHHHHHHHHHHHhhh-cceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecccc
Confidence 44555677777888888776 233333333 55666555543222 12 233556778888888887
Q ss_pred cCcc-cCc----cccCcccCceeecccccccccch-----h---------hhcCCCCCEEEccCCCCccCccc-----cC
Q psy3567 111 KIES-LPK----DIGTLEKLENVSGNCNLIKELPL-----S---------FSKLHNLKHLSLSQNQLNKFPTV-----LF 166 (277)
Q Consensus 111 ~i~~-~~~----~~~~l~~L~~L~l~~n~~~~l~~-----~---------~~~l~~L~~L~l~~n~l~~~~~~-----l~ 166 (277)
.+.. .|+ -+.....|.+|.+++|+++.+.. . ...-+.|+.+.++.|++...+.. +.
T Consensus 103 Afg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~ 182 (388)
T COG5238 103 AFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLE 182 (388)
T ss_pred ccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHH
Confidence 7752 222 34566677888888887774421 1 12345688888888877644332 22
Q ss_pred CCCCCCEEEccCCCCc--ccCch-----hccceeeEEEccCCccCc-----CCcCccCCCCCCEEEcCCCccccCccCcc
Q psy3567 167 NLQHLDVLDLSFNRIE--SIPDG-----IGKMKVIEMNLNKNQICH-----ISPDISECVRLKILRLEENCLAINAIPTC 234 (277)
Q Consensus 167 ~~~~L~~L~l~~n~l~--~l~~~-----~~~~~l~~L~l~~n~l~~-----l~~~l~~~~~L~~L~l~~n~~~~~~~~~~ 234 (277)
....|.++.+..|+|. .+.-- .....+..||+++|-++. +...+..++.|+.|.+..|.+........
T Consensus 183 sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v 262 (388)
T COG5238 183 SHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSV 262 (388)
T ss_pred hhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHH
Confidence 3457788888888776 12111 122247778888888772 33345566677888888777663332222
Q ss_pred ccC-----CCCccEEEcCCCeeeecc
Q psy3567 235 ILT-----SSNVCTLNVEGNLFEMKA 255 (277)
Q Consensus 235 ~~~-----~~~L~~l~l~~n~~~~~~ 255 (277)
+.. .|+|..|....|...+..
T Consensus 263 ~~~f~e~~~p~l~~L~~~Yne~~~~~ 288 (388)
T COG5238 263 LRRFNEKFVPNLMPLPGDYNERRGGI 288 (388)
T ss_pred HHHhhhhcCCCccccccchhhhcCce
Confidence 221 356677766666555444
No 47
>KOG4579|consensus
Probab=98.53 E-value=3.4e-09 Score=77.12 Aligned_cols=57 Identities=25% Similarity=0.366 Sum_probs=22.6
Q ss_pred CCCEEEccCCCCcccCchhccce-eeEEEccCCccCcCCcCccCCCCCCEEEcCCCcc
Q psy3567 170 HLDVLDLSFNRIESIPDGIGKMK-VIEMNLNKNQICHISPDISECVRLKILRLEENCL 226 (277)
Q Consensus 170 ~L~~L~l~~n~l~~l~~~~~~~~-l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~~ 226 (277)
..+++++++|.++++|..+..++ ++.++++.|.+...|..+..+.++..|+.-+|..
T Consensus 78 t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 78 TATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred hhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcCCCCcc
Confidence 33334444444444443333332 3334444444443333333344444444444433
No 48
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.50 E-value=1.9e-08 Score=81.49 Aligned_cols=169 Identities=21% Similarity=0.247 Sum_probs=94.5
Q ss_pred CCCceeEecCCCCcCCCCCCcee-------eeccCC------cch-----------hHhhhccCccCEEEeecCCCC-cC
Q psy3567 14 SPSKLTLLLPGKKNRGLIEGTIF-------VLKMGN------SAT-----------KRHFETAKKTGVINLSHQGFK-EF 68 (277)
Q Consensus 14 ~~~l~~l~l~~~~~~~~~~~~~~-------~l~~~~------~~~-----------~~~l~~~~~L~~L~l~~~~i~-~~ 68 (277)
...+++++|+||.++..-+..++ .+.+.+ +.. .+++-+|+.+++++|++|.|. .+
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 45788899999988766443331 111111 000 166667777777777777776 45
Q ss_pred ChhHHHh---hccccEEEccCCCCCcCCcc--------------ccccCCCcEEeccCCcCcccCc-----cccCcccCc
Q psy3567 69 PDEMNEL---KAVLRTLDISQNKISKFPLD--------------LASYQLLKSLTFDQNKIESLPK-----DIGTLEKLE 126 (277)
Q Consensus 69 ~~~~~~~---~~~L~~L~l~~~~i~~~~~~--------------~~~l~~L~~L~l~~~~i~~~~~-----~~~~l~~L~ 126 (277)
|+.+..+ ...|.+|.+++|.+..+... .++-|.|+.+....|++...+. .+.....|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 5443332 25667777777766533321 1234566666666666654332 233345666
Q ss_pred eeecccccccc--c----chhhhcCCCCCEEEccCCCCcc-----CccccCCCCCCCEEEccCCCCc
Q psy3567 127 NVSGNCNLIKE--L----PLSFSKLHNLKHLSLSQNQLNK-----FPTVLFNLQHLDVLDLSFNRIE 182 (277)
Q Consensus 127 ~L~l~~n~~~~--l----~~~~~~l~~L~~L~l~~n~l~~-----~~~~l~~~~~L~~L~l~~n~l~ 182 (277)
.+.+..|.+.. + -..+..+.+|+.||+.+|-++. +...+..|+.|+.|.+.+|-++
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls 255 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLS 255 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhc
Confidence 66666666652 1 1224445666667776666651 2334455666666666666554
No 49
>KOG1644|consensus
Probab=98.45 E-value=3.7e-07 Score=70.87 Aligned_cols=121 Identities=18% Similarity=0.166 Sum_probs=75.9
Q ss_pred CCCceeEecCCCCcC-----CCCCCceeeeccCCcchh--HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccC
Q psy3567 14 SPSKLTLLLPGKKNR-----GLIEGTIFVLKMGNSATK--RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQ 86 (277)
Q Consensus 14 ~~~l~~l~l~~~~~~-----~~~~~~~~~l~~~~~~~~--~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~ 86 (277)
+...++++|++..+. |.+-..+..+.+.++.+. ..|..++.|.+|.+++|+|+.+.+.+....+++..|.+.+
T Consensus 18 ~~~e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Ltn 97 (233)
T KOG1644|consen 18 SVRERELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTN 97 (233)
T ss_pred hccccccccccccccchhhccccccccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecC
Confidence 445666777776542 222234444555555553 5667777777777777777777777777767777777777
Q ss_pred CCCCcCCc--cccccCCCcEEeccCCcCcccC----ccccCcccCceeeccccc
Q psy3567 87 NKISKFPL--DLASYQLLKSLTFDQNKIESLP----KDIGTLEKLENVSGNCNL 134 (277)
Q Consensus 87 ~~i~~~~~--~~~~l~~L~~L~l~~~~i~~~~----~~~~~l~~L~~L~l~~n~ 134 (277)
|++..+.+ .+..++.|++|.+-+|.++... .-+..+++|+.||+..-.
T Consensus 98 Nsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 98 NSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred cchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 77775443 3566777777777777766432 134556666666654433
No 50
>KOG4579|consensus
Probab=98.41 E-value=2.8e-08 Score=72.39 Aligned_cols=94 Identities=29% Similarity=0.417 Sum_probs=59.0
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCc
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLE 126 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~ 126 (277)
..+.....|+..++++|.++.+|+.+...++.+++|++.+|.++.+|..++.++.|+.++++.|.+...|..+..+.++-
T Consensus 47 y~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~ 126 (177)
T KOG4579|consen 47 YMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLD 126 (177)
T ss_pred HHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHhHH
Confidence 34455556666667777666666666555556666666666666666666666666666666666666666555555666
Q ss_pred eeecccccccccch
Q psy3567 127 NVSGNCNLIKELPL 140 (277)
Q Consensus 127 ~L~l~~n~~~~l~~ 140 (277)
.|+..+|....++.
T Consensus 127 ~Lds~~na~~eid~ 140 (177)
T KOG4579|consen 127 MLDSPENARAEIDV 140 (177)
T ss_pred HhcCCCCccccCcH
Confidence 66655555555543
No 51
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.39 E-value=1.4e-06 Score=75.93 Aligned_cols=135 Identities=18% Similarity=0.303 Sum_probs=86.4
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCC-CCCcCCccccccCCCcEEeccCC-cCcccCccccCccc
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQN-KISKFPLDLASYQLLKSLTFDQN-KIESLPKDIGTLEK 124 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~-~i~~~~~~~~~l~~L~~L~l~~~-~i~~~~~~~~~l~~ 124 (277)
..+..+++++.|++++|.++.+| .++++|+.|.+++| .++.+|..+. .+|++|++++| .+..+|. .
T Consensus 46 ~r~~~~~~l~~L~Is~c~L~sLP----~LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~------s 113 (426)
T PRK15386 46 PQIEEARASGRLYIKDCDIESLP----VLPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPE------S 113 (426)
T ss_pred HHHHHhcCCCEEEeCCCCCcccC----CCCCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccccccc------c
Confidence 44667899999999999999998 35578999999886 4556666542 57999999988 6666654 3
Q ss_pred Cceeeccccccc---ccchhhhcCCCCCEEEccCCCCc---cCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEc
Q psy3567 125 LENVSGNCNLIK---ELPLSFSKLHNLKHLSLSQNQLN---KFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNL 198 (277)
Q Consensus 125 L~~L~l~~n~~~---~l~~~~~~l~~L~~L~l~~n~l~---~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l 198 (277)
|+.|++.++... .+|. +|+.|.+.+++.. .++..+ .++|++|++++|....+|..+. ..++.|++
T Consensus 114 Le~L~L~~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i~LP~~LP-~SLk~L~l 184 (426)
T PRK15386 114 VRSLEIKGSATDSIKNVPN------GLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNIILPEKLP-ESLQSITL 184 (426)
T ss_pred cceEEeCCCCCcccccCcc------hHhheecccccccccccccccc--CCcccEEEecCCCcccCccccc-ccCcEEEe
Confidence 666666665543 3333 3555655432211 111111 1468888888776655444332 24677777
Q ss_pred cCCc
Q psy3567 199 NKNQ 202 (277)
Q Consensus 199 ~~n~ 202 (277)
+.+.
T Consensus 185 s~n~ 188 (426)
T PRK15386 185 HIEQ 188 (426)
T ss_pred cccc
Confidence 6653
No 52
>KOG2120|consensus
Probab=98.29 E-value=1.7e-08 Score=82.68 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=87.8
Q ss_pred ccCEEEeecCCCC--cCChhHHHhhccccEEEccCCCCCc-CCccccccCCCcEEeccCC-cCccc--CccccCcccCce
Q psy3567 54 KTGVINLSHQGFK--EFPDEMNELKAVLRTLDISQNKISK-FPLDLASYQLLKSLTFDQN-KIESL--PKDIGTLEKLEN 127 (277)
Q Consensus 54 ~L~~L~l~~~~i~--~~~~~~~~~~~~L~~L~l~~~~i~~-~~~~~~~l~~L~~L~l~~~-~i~~~--~~~~~~l~~L~~ 127 (277)
.++.+||++..|+ .+-.-+.. +.+|+.|.+.++++.+ +...+++-..|+.++++.+ .++.. .--+..+..|..
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~-C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQ-CSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHH-HHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 4667777777666 22222223 3677777777776652 3334566667777777765 34432 113455666777
Q ss_pred eecccccccc--cchhhhcC-CCCCEEEccCCCCc----cCccccCCCCCCCEEEccCC-CCc-ccCchhccce-eeEEE
Q psy3567 128 VSGNCNLIKE--LPLSFSKL-HNLKHLSLSQNQLN----KFPTVLFNLQHLDVLDLSFN-RIE-SIPDGIGKMK-VIEMN 197 (277)
Q Consensus 128 L~l~~n~~~~--l~~~~~~l-~~L~~L~l~~n~l~----~~~~~l~~~~~L~~L~l~~n-~l~-~l~~~~~~~~-l~~L~ 197 (277)
|+++.+.+.. +.-.+... ++|..|+++++.-. .+.--...+++|.+||+++| .++ .....+..++ ++++.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 7777666552 21122222 35666666665322 11111234667777777666 333 2222333443 56666
Q ss_pred ccCCccC--cCCcCccCCCCCCEEEcCCC
Q psy3567 198 LNKNQIC--HISPDISECVRLKILRLEEN 224 (277)
Q Consensus 198 l~~n~l~--~l~~~l~~~~~L~~L~l~~n 224 (277)
++.|..- .--..+...|+|++|+.-|+
T Consensus 345 lsRCY~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcCCChHHeeeeccCcceEEEEeccc
Confidence 6555422 11122455566666665443
No 53
>KOG1644|consensus
Probab=98.26 E-value=2.5e-06 Score=66.33 Aligned_cols=99 Identities=23% Similarity=0.318 Sum_probs=45.7
Q ss_pred CEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccc--eeeEEEccCCccCcCCcC--ccCCCCCCEEEcCCC
Q psy3567 149 KHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKM--KVIEMNLNKNQICHISPD--ISECVRLKILRLEEN 224 (277)
Q Consensus 149 ~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~--~l~~L~l~~n~l~~l~~~--l~~~~~L~~L~l~~n 224 (277)
..+|+++|.+..+ ..+..++.|.+|.+++|.|+.+...+... .+..|.+.+|.|.++... +..||.|+.|.+-+|
T Consensus 45 d~iDLtdNdl~~l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~N 123 (233)
T KOG1644|consen 45 DAIDLTDNDLRKL-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGN 123 (233)
T ss_pred ceecccccchhhc-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCC
Confidence 3344444443333 12233444444444444444443333222 144444555554444322 455666666666666
Q ss_pred ccccCccCc--cccCCCCccEEEcCC
Q psy3567 225 CLAINAIPT--CILTSSNVCTLNVEG 248 (277)
Q Consensus 225 ~~~~~~~~~--~~~~~~~L~~l~l~~ 248 (277)
+++...-.. .+..+|+++.||.++
T Consensus 124 pv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 124 PVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred chhcccCceeEEEEecCcceEeehhh
Confidence 665221111 234556666666554
No 54
>KOG2982|consensus
Probab=98.23 E-value=5.1e-07 Score=74.20 Aligned_cols=201 Identities=16% Similarity=0.181 Sum_probs=131.2
Q ss_pred hccCccCEEEeecCCCCcCCh--hHHHhhccccEEEccCCCCCcCCccc-cccCCCcEEeccCCcCc--ccCccccCccc
Q psy3567 50 ETAKKTGVINLSHQGFKEFPD--EMNELKAVLRTLDISQNKISKFPLDL-ASYQLLKSLTFDQNKIE--SLPKDIGTLEK 124 (277)
Q Consensus 50 ~~~~~L~~L~l~~~~i~~~~~--~~~~~~~~L~~L~l~~~~i~~~~~~~-~~l~~L~~L~l~~~~i~--~~~~~~~~l~~ 124 (277)
..++.++.+||.+|.|+...+ .+..-+|.|++|+++.|++...-... ....+|+.|.+.++.+. .....+..++.
T Consensus 68 ~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~ 147 (418)
T KOG2982|consen 68 SSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPK 147 (418)
T ss_pred HHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchh
Confidence 557788999999999995543 22223489999999999887332222 46678999999999876 33456778899
Q ss_pred Cceeecccccccccc---hhhhcC-CCCCEEEccCCCCccC--ccccC-CCCCCCEEEccCCCCcccCch--hccce-ee
Q psy3567 125 LENVSGNCNLIKELP---LSFSKL-HNLKHLSLSQNQLNKF--PTVLF-NLQHLDVLDLSFNRIESIPDG--IGKMK-VI 194 (277)
Q Consensus 125 L~~L~l~~n~~~~l~---~~~~~l-~~L~~L~l~~n~l~~~--~~~l~-~~~~L~~L~l~~n~l~~l~~~--~~~~~-l~ 194 (277)
++++.++.|.+..+- ...... +.+.++.+..|..... ...++ .++++..+.+..|.++..... ....+ +.
T Consensus 148 vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~ 227 (418)
T KOG2982|consen 148 VTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLS 227 (418)
T ss_pred hhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcch
Confidence 999999999776432 112222 2455666666543311 01122 357788888888877643222 11222 44
Q ss_pred EEEccCCccCcCCcC--ccCCCCCCEEEcCCCccccCcc----Cc--cccCCCCccEEEcCCCeeee
Q psy3567 195 EMNLNKNQICHISPD--ISECVRLKILRLEENCLAINAI----PT--CILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 195 ~L~l~~n~l~~l~~~--l~~~~~L~~L~l~~n~~~~~~~----~~--~~~~~~~L~~l~l~~n~~~~ 253 (277)
-|.++.|+|.++... +..++.|+.|.+++|++. ..+ +. .++++++++.|+ |..++.
T Consensus 228 ~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~-d~l~~~err~llIaRL~~v~vLN--GskIss 291 (418)
T KOG2982|consen 228 CLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS-DPLRGGERRFLLIARLTKVQVLN--GSKISS 291 (418)
T ss_pred hhhhcccccccHHHHHHHcCCchhheeeccCCccc-ccccCCcceEEEEeeccceEEec--Ccccch
Confidence 678888999877653 788899999999999876 222 21 355677777764 335553
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.22 E-value=1.2e-06 Score=51.63 Aligned_cols=38 Identities=32% Similarity=0.577 Sum_probs=21.8
Q ss_pred cccEEEccCCCCCcCCccccccCCCcEEeccCCcCccc
Q psy3567 78 VLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESL 115 (277)
Q Consensus 78 ~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~ 115 (277)
+|++|++++|+|+.+|+.+.++++|++|++++|+++.+
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 45666666666666655566666666666666665544
No 56
>KOG2120|consensus
Probab=98.17 E-value=2e-08 Score=82.31 Aligned_cols=149 Identities=20% Similarity=0.226 Sum_probs=83.2
Q ss_pred CCcEEeccCCcCc--ccCccccCcccCceeeccccccc-ccchhhhcCCCCCEEEccCC-CCccCc--cccCCCCCCCEE
Q psy3567 101 LLKSLTFDQNKIE--SLPKDIGTLEKLENVSGNCNLIK-ELPLSFSKLHNLKHLSLSQN-QLNKFP--TVLFNLQHLDVL 174 (277)
Q Consensus 101 ~L~~L~l~~~~i~--~~~~~~~~l~~L~~L~l~~n~~~-~l~~~~~~l~~L~~L~l~~n-~l~~~~--~~l~~~~~L~~L 174 (277)
.++++|+++..|+ .+-.-+..+.+|+.+.+.++.+. .+...+++-..|+.++++.+ .+++.. -.+.+++.|+.|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 4777788777776 23334556777777777777776 35556677777888888765 344322 234567778888
Q ss_pred EccCCCCc--ccCchhc--cceeeEEEccCCccC----cCCcCccCCCCCCEEEcCCCccccCccCccccCCCCccEEEc
Q psy3567 175 DLSFNRIE--SIPDGIG--KMKVIEMNLNKNQIC----HISPDISECVRLKILRLEENCLAINAIPTCILTSSNVCTLNV 246 (277)
Q Consensus 175 ~l~~n~l~--~l~~~~~--~~~l~~L~l~~n~l~----~l~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~l 246 (277)
++++|.+. .+.-.+. ..++..|++++.+-. .+..-...|++|.+|||++|..-.......+.+++-|+++.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 88887664 1111111 113555555554311 222224456666666666654221233334445555555555
Q ss_pred CCC
Q psy3567 247 EGN 249 (277)
Q Consensus 247 ~~n 249 (277)
+.+
T Consensus 346 sRC 348 (419)
T KOG2120|consen 346 SRC 348 (419)
T ss_pred hhh
Confidence 554
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.14 E-value=3e-06 Score=49.86 Aligned_cols=38 Identities=47% Similarity=0.671 Sum_probs=21.2
Q ss_pred CCCEEEccCCCCccCccccCCCCCCCEEEccCCCCccc
Q psy3567 147 NLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESI 184 (277)
Q Consensus 147 ~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l 184 (277)
+|++|++++|++..+|+.++++++|++|++++|.++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCC
Confidence 45566666666666555555666666666666655544
No 58
>KOG3665|consensus
Probab=98.08 E-value=2.1e-06 Score=80.43 Aligned_cols=130 Identities=23% Similarity=0.300 Sum_probs=91.5
Q ss_pred cCccCEEEeecCCCC--cCChhHHHhhccccEEEccCCCCC--cCCccccccCCCcEEeccCCcCcccCccccCcccCce
Q psy3567 52 AKKTGVINLSHQGFK--EFPDEMNELKAVLRTLDISQNKIS--KFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLEN 127 (277)
Q Consensus 52 ~~~L~~L~l~~~~i~--~~~~~~~~~~~~L~~L~l~~~~i~--~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~ 127 (277)
-.+|+.|++++...- ..|..++..+|.|+.|.+.+-.+. ++..-..++++|+.||++++.++.+ .++..+++|+.
T Consensus 121 r~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~ 199 (699)
T KOG3665|consen 121 RQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQV 199 (699)
T ss_pred HHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHH
Confidence 357788888886433 667777777888999888877654 2233356788888889999888877 56778888888
Q ss_pred eecccccccccc--hhhhcCCCCCEEEccCCCCccCcc-------ccCCCCCCCEEEccCCCCc
Q psy3567 128 VSGNCNLIKELP--LSFSKLHNLKHLSLSQNQLNKFPT-------VLFNLQHLDVLDLSFNRIE 182 (277)
Q Consensus 128 L~l~~n~~~~l~--~~~~~l~~L~~L~l~~n~l~~~~~-------~l~~~~~L~~L~l~~n~l~ 182 (277)
|.+.+-.+..-. ..+..+++|+.||+++......+. .-..++.|+.||.+++.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 887766665322 346778888888888875553321 1124778888888776665
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.03 E-value=3.4e-05 Score=67.38 Aligned_cols=129 Identities=18% Similarity=0.239 Sum_probs=87.0
Q ss_pred ccccEEEccCCCCCcCCccccccCCCcEEeccCC-cCcccCccccCcccCceeecccc-cccccchhhhcCCCCCEEEcc
Q psy3567 77 AVLRTLDISQNKISKFPLDLASYQLLKSLTFDQN-KIESLPKDIGTLEKLENVSGNCN-LIKELPLSFSKLHNLKHLSLS 154 (277)
Q Consensus 77 ~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~-~i~~~~~~~~~l~~L~~L~l~~n-~~~~l~~~~~~l~~L~~L~l~ 154 (277)
.+++.|++++|.+..+|. -..+|+.|.++++ .++.+|..+ ..+|++|.+++| .+..+|. .|+.|++.
T Consensus 52 ~~l~~L~Is~c~L~sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP~------sLe~L~L~ 120 (426)
T PRK15386 52 RASGRLYIKDCDIESLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLPE------SVRSLEIK 120 (426)
T ss_pred cCCCEEEeCCCCCcccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccccccc------ccceEEeC
Confidence 889999999999988882 2246999999885 556666655 357999999877 5555553 47777777
Q ss_pred CCCCc---cCccccCCCCCCCEEEccCCC-Cc--ccCchhccceeeEEEccCCccCcCCcCccCCCCCCEEEcCCCc
Q psy3567 155 QNQLN---KFPTVLFNLQHLDVLDLSFNR-IE--SIPDGIGKMKVIEMNLNKNQICHISPDISECVRLKILRLEENC 225 (277)
Q Consensus 155 ~n~l~---~~~~~l~~~~~L~~L~l~~n~-l~--~l~~~~~~~~l~~L~l~~n~l~~l~~~l~~~~~L~~L~l~~n~ 225 (277)
.+... .+|. +|+.|.+..+. .. .+|. .....|++|++.+|....+|..+. .+|+.|.++.+.
T Consensus 121 ~n~~~~L~~LPs------sLk~L~I~~~n~~~~~~lp~-~LPsSLk~L~Is~c~~i~LP~~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 121 GSATDSIKNVPN------GLTSLSINSYNPENQARIDN-LISPSLKTLSLTGCSNIILPEKLP--ESLQSITLHIEQ 188 (426)
T ss_pred CCCCcccccCcc------hHhheecccccccccccccc-ccCCcccEEEecCCCcccCccccc--ccCcEEEecccc
Confidence 66543 3443 45666664332 11 2221 111258999999998777776554 589999998763
No 60
>KOG3665|consensus
Probab=97.83 E-value=3.5e-06 Score=78.98 Aligned_cols=145 Identities=17% Similarity=0.224 Sum_probs=72.6
Q ss_pred CCCcEEeccCCcCc--ccCcccc-CcccCceeeccccccc--ccchhhhcCCCCCEEEccCCCCccCccccCCCCCCCEE
Q psy3567 100 QLLKSLTFDQNKIE--SLPKDIG-TLEKLENVSGNCNLIK--ELPLSFSKLHNLKHLSLSQNQLNKFPTVLFNLQHLDVL 174 (277)
Q Consensus 100 ~~L~~L~l~~~~i~--~~~~~~~-~l~~L~~L~l~~n~~~--~l~~~~~~l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L 174 (277)
.+|++|++++...- ..+..++ .+|+|+.|.+.+-.+. ++......+++|..||+++++++.+ .+++.+++|++|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L 200 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVL 200 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHH
Confidence 45666666654322 1222222 3566666665554443 2223345566666666666666655 455566666666
Q ss_pred EccCCCCcccCch--hccce-eeEEEccCCccCcCC-------cCccCCCCCCEEEcCCCccccCccCccccCCCCccEE
Q psy3567 175 DLSFNRIESIPDG--IGKMK-VIEMNLNKNQICHIS-------PDISECVRLKILRLEENCLAINAIPTCILTSSNVCTL 244 (277)
Q Consensus 175 ~l~~n~l~~l~~~--~~~~~-l~~L~l~~n~l~~l~-------~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l 244 (277)
.+.+-.+..-... ++.++ |+.||++......-+ ++-..+|.|+.||.|+..+....+...+...++|+++
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i 280 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQI 280 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhh
Confidence 6665555432221 23332 555666554433211 1223367777788777766622222223334555544
Q ss_pred E
Q psy3567 245 N 245 (277)
Q Consensus 245 ~ 245 (277)
.
T Consensus 281 ~ 281 (699)
T KOG3665|consen 281 A 281 (699)
T ss_pred h
Confidence 4
No 61
>KOG2123|consensus
Probab=97.11 E-value=2.1e-05 Score=64.37 Aligned_cols=106 Identities=23% Similarity=0.240 Sum_probs=58.4
Q ss_pred CCCCEEEccCCCCccCccccCCCCCCCEEEccCCCCcccCchhccceeeEEEccCCccCcCCcC--ccCCCCCCEEEcCC
Q psy3567 146 HNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFNRIESIPDGIGKMKVIEMNLNKNQICHISPD--ISECVRLKILRLEE 223 (277)
Q Consensus 146 ~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n~l~~l~~~~~~~~l~~L~l~~n~l~~l~~~--l~~~~~L~~L~l~~ 223 (277)
.+.+.|++++|.++.+ .....++.|+.|.|+-|.|+.+......-+|++|+|..|.|..+... +.++|+|+.|.|..
T Consensus 19 ~~vkKLNcwg~~L~DI-sic~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~E 97 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDI-SICEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDE 97 (388)
T ss_pred HHhhhhcccCCCccHH-HHHHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhcc
Confidence 3444555555555544 12224555666666666665554322222366666666666655543 56778888888888
Q ss_pred CccccCccCc-----cccCCCCccEEEcCCCeeeecc
Q psy3567 224 NCLAINAIPT-----CILTSSNVCTLNVEGNLFEMKA 255 (277)
Q Consensus 224 n~~~~~~~~~-----~~~~~~~L~~l~l~~n~~~~~~ 255 (277)
|+-- +.-+. .+.-+|+|++|| +-.++.++
T Consensus 98 NPCc-~~ag~nYR~~VLR~LPnLkKLD--nv~VteeE 131 (388)
T KOG2123|consen 98 NPCC-GEAGQNYRRKVLRVLPNLKKLD--NVPVTEEE 131 (388)
T ss_pred CCcc-cccchhHHHHHHHHcccchhcc--CccccHHH
Confidence 8765 33332 244567777763 33444433
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.06 E-value=0.0012 Score=48.32 Aligned_cols=103 Identities=20% Similarity=0.343 Sum_probs=47.9
Q ss_pred hhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCc-cccccCCCcEEeccCCcCcccCc-cccCcccC
Q psy3567 48 HFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPL-DLASYQLLKSLTFDQNKIESLPK-DIGTLEKL 125 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~-~~~~l~~L~~L~l~~~~i~~~~~-~~~~l~~L 125 (277)
.|..+++++.+.+.. .+..+++..+..+.+++.+.+.++ +..++. .|.+++.++.+.+.+ .+..++. .+..+.++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 466666777777664 466666666666556777777663 555544 366666677777754 4443432 45556666
Q ss_pred ceeecccccccccch-hhhcCCCCCEEEccC
Q psy3567 126 ENVSGNCNLIKELPL-SFSKLHNLKHLSLSQ 155 (277)
Q Consensus 126 ~~L~l~~n~~~~l~~-~~~~l~~L~~L~l~~ 155 (277)
+.+.+..+ +..++. .|... +++.+.+..
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC
Confidence 66666443 344432 34444 566665544
No 63
>KOG2123|consensus
Probab=96.93 E-value=6.4e-05 Score=61.60 Aligned_cols=79 Identities=28% Similarity=0.290 Sum_probs=40.4
Q ss_pred ccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCc--cccCcccCceeecc
Q psy3567 54 KTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPK--DIGTLEKLENVSGN 131 (277)
Q Consensus 54 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~~~l~~L~~L~l~ 131 (277)
+.++|++.||.+..+. +..-++.|++|.|+-|.|+.+.+ +..+.+|++|+|..|.|..+.+ -+.++++|+.|.+.
T Consensus 20 ~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p-l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP-LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh-HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 4455555555555443 12222555555555555554432 4455555555555555554432 34555555555555
Q ss_pred cccc
Q psy3567 132 CNLI 135 (277)
Q Consensus 132 ~n~~ 135 (277)
.|+.
T Consensus 97 ENPC 100 (388)
T KOG2123|consen 97 ENPC 100 (388)
T ss_pred cCCc
Confidence 5543
No 64
>KOG2739|consensus
Probab=96.55 E-value=0.0016 Score=52.97 Aligned_cols=82 Identities=27% Similarity=0.264 Sum_probs=37.9
Q ss_pred CCCCCEEEccCCCCccCccccCCCCCCCEEEccCC--CCc-ccCchhcc-ceeeEEEccCCccCcCCcC--ccCCCCCCE
Q psy3567 145 LHNLKHLSLSQNQLNKFPTVLFNLQHLDVLDLSFN--RIE-SIPDGIGK-MKVIEMNLNKNQICHISPD--ISECVRLKI 218 (277)
Q Consensus 145 l~~L~~L~l~~n~l~~~~~~l~~~~~L~~L~l~~n--~l~-~l~~~~~~-~~l~~L~l~~n~l~~l~~~--l~~~~~L~~ 218 (277)
...|+.+++.+..++++. .+-.+++|+.|.++.| ++. .++-..-. ..++++.++.|++..+... +....+|..
T Consensus 42 ~~~le~ls~~n~gltt~~-~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTLT-NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred ccchhhhhhhccceeecc-cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 344444444444444331 2234556666666666 322 22221111 2355566666655532221 344455556
Q ss_pred EEcCCCccc
Q psy3567 219 LRLEENCLA 227 (277)
Q Consensus 219 L~l~~n~~~ 227 (277)
|++..|..+
T Consensus 121 Ldl~n~~~~ 129 (260)
T KOG2739|consen 121 LDLFNCSVT 129 (260)
T ss_pred hhcccCCcc
Confidence 665555544
No 65
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.53 E-value=0.009 Score=43.64 Aligned_cols=12 Identities=33% Similarity=0.586 Sum_probs=3.8
Q ss_pred ccccCCCcEEec
Q psy3567 96 LASYQLLKSLTF 107 (277)
Q Consensus 96 ~~~l~~L~~L~l 107 (277)
|.++.+++.+.+
T Consensus 31 F~~~~~l~~i~~ 42 (129)
T PF13306_consen 31 FSNCTSLKSINF 42 (129)
T ss_dssp TTT-TT-SEEEE
T ss_pred cccccccccccc
Confidence 333333333333
No 66
>KOG2739|consensus
Probab=96.52 E-value=0.00093 Score=54.27 Aligned_cols=105 Identities=22% Similarity=0.293 Sum_probs=53.1
Q ss_pred hhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCC--CCC-cCCccccccCCCcEEeccCCcCccc--CccccCcc
Q psy3567 49 FETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQN--KIS-KFPLDLASYQLLKSLTFDQNKIESL--PKDIGTLE 123 (277)
Q Consensus 49 l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~--~i~-~~~~~~~~l~~L~~L~l~~~~i~~~--~~~~~~l~ 123 (277)
...+..+..+++.+..++.+.. +-.+ ++|++|.++.| ++. .++.....+++|+++.+++|+|..+ -..+..+.
T Consensus 39 ~d~~~~le~ls~~n~gltt~~~-~P~L-p~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~ 116 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTLTN-FPKL-PKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELE 116 (260)
T ss_pred cccccchhhhhhhccceeeccc-CCCc-chhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhc
Confidence 3444455555555555553321 1122 56677777666 332 2233334446677777777766542 12344455
Q ss_pred cCceeecccccccccc----hhhhcCCCCCEEEccC
Q psy3567 124 KLENVSGNCNLIKELP----LSFSKLHNLKHLSLSQ 155 (277)
Q Consensus 124 ~L~~L~l~~n~~~~l~----~~~~~l~~L~~L~l~~ 155 (277)
+|..|++.+|....+- ..|.-+++|++|+-.+
T Consensus 117 nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 117 NLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred chhhhhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 5556666666555432 1244556666655544
No 67
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.79 E-value=0.0037 Score=30.58 Aligned_cols=14 Identities=36% Similarity=0.686 Sum_probs=5.5
Q ss_pred cEEEccCCCCCcCC
Q psy3567 80 RTLDISQNKISKFP 93 (277)
Q Consensus 80 ~~L~l~~~~i~~~~ 93 (277)
++|++++|+++.+|
T Consensus 3 ~~Ldls~n~l~~ip 16 (22)
T PF00560_consen 3 EYLDLSGNNLTSIP 16 (22)
T ss_dssp SEEEETSSEESEEG
T ss_pred cEEECCCCcCEeCC
Confidence 33444444333333
No 68
>KOG4308|consensus
Probab=95.78 E-value=2.9e-05 Score=69.87 Aligned_cols=175 Identities=20% Similarity=0.276 Sum_probs=87.3
Q ss_pred ccEEEccCCCCCc-----CCccccccCCCcEEeccCCcCcc-----cCccccCc-ccCceeeccccccc-----ccchhh
Q psy3567 79 LRTLDISQNKISK-----FPLDLASYQLLKSLTFDQNKIES-----LPKDIGTL-EKLENVSGNCNLIK-----ELPLSF 142 (277)
Q Consensus 79 L~~L~l~~~~i~~-----~~~~~~~l~~L~~L~l~~~~i~~-----~~~~~~~l-~~L~~L~l~~n~~~-----~l~~~~ 142 (277)
+..+++.+|.+.. +...+...+.|..|++++|.+.. +-..+... ..+++|.+..+.+. .++..+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 4445555555442 12223444555556666555541 11112221 33444554444443 123344
Q ss_pred hcCCCCCEEEccCCCCc-----cCccccC----CCCCCCEEEccCCCCcc-----cCchhcc--ceeeEEEccCCccC--
Q psy3567 143 SKLHNLKHLSLSQNQLN-----KFPTVLF----NLQHLDVLDLSFNRIES-----IPDGIGK--MKVIEMNLNKNQIC-- 204 (277)
Q Consensus 143 ~~l~~L~~L~l~~n~l~-----~~~~~l~----~~~~L~~L~l~~n~l~~-----l~~~~~~--~~l~~L~l~~n~l~-- 204 (277)
.....++.+++..|.+. .++..+. ...++++|.+.+|.++. +...+.. ....++++.+|.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 44555666666666553 1122222 34566777777776651 1111111 12445677777665
Q ss_pred ---cCCcCccCC-CCCCEEEcCCCccccC---ccCccccCCCCccEEEcCCCeeee
Q psy3567 205 ---HISPDISEC-VRLKILRLEENCLAIN---AIPTCILTSSNVCTLNVEGNLFEM 253 (277)
Q Consensus 205 ---~l~~~l~~~-~~L~~L~l~~n~~~~~---~~~~~~~~~~~L~~l~l~~n~~~~ 253 (277)
.+.+.+..+ ..+++++++.|.++.. .+...+..++.++++.++.|.+..
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 233444444 5677777777777622 333445556677777777777664
No 69
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.30 E-value=0.0078 Score=29.41 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=11.8
Q ss_pred CCcEEeccCCcCcccCcccc
Q psy3567 101 LLKSLTFDQNKIESLPKDIG 120 (277)
Q Consensus 101 ~L~~L~l~~~~i~~~~~~~~ 120 (277)
+|++|++++|+++.+|.+++
T Consensus 1 ~L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp TESEEEETSSEESEEGTTTT
T ss_pred CccEEECCCCcCEeCChhhc
Confidence 35666666666666655543
No 70
>KOG4308|consensus
Probab=95.00 E-value=7.5e-05 Score=67.21 Aligned_cols=173 Identities=23% Similarity=0.300 Sum_probs=101.3
Q ss_pred cCEEEeecCCCCcCC-hhHHH---hhccccEEEccCCCCCc-----CCcccccc-CCCcEEeccCCcCcc-----cCccc
Q psy3567 55 TGVINLSHQGFKEFP-DEMNE---LKAVLRTLDISQNKISK-----FPLDLASY-QLLKSLTFDQNKIES-----LPKDI 119 (277)
Q Consensus 55 L~~L~l~~~~i~~~~-~~~~~---~~~~L~~L~l~~~~i~~-----~~~~~~~l-~~L~~L~l~~~~i~~-----~~~~~ 119 (277)
+..+.+.+|.+..-. +.+.. ..+.|..|++++|.+.. +...+... +.+++|++..|.++. +...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 566777777766221 11111 13667777777777761 11222232 456667777776652 33445
Q ss_pred cCcccCceeecccccccc-----cchhhh----cCCCCCEEEccCCCCcc-----CccccCCCCC-CCEEEccCCCCccc
Q psy3567 120 GTLEKLENVSGNCNLIKE-----LPLSFS----KLHNLKHLSLSQNQLNK-----FPTVLFNLQH-LDVLDLSFNRIESI 184 (277)
Q Consensus 120 ~~l~~L~~L~l~~n~~~~-----l~~~~~----~l~~L~~L~l~~n~l~~-----~~~~l~~~~~-L~~L~l~~n~l~~l 184 (277)
.....++.++++.|.+.. ++..+. ...++++|.+.+|.++. +...+...+. +..+++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 556677777777777642 222233 45677888888877662 1223334444 66678888876622
Q ss_pred -----Cchhccc--eeeEEEccCCccC-----cCCcCccCCCCCCEEEcCCCccc
Q psy3567 185 -----PDGIGKM--KVIEMNLNKNQIC-----HISPDISECVRLKILRLEENCLA 227 (277)
Q Consensus 185 -----~~~~~~~--~l~~L~l~~n~l~-----~l~~~l~~~~~L~~L~l~~n~~~ 227 (277)
...+... .+++++++.|.|+ .+...+..++.++.+.++.|.++
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 2222222 3677888888887 34555667778888888888776
No 71
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.76 E-value=0.019 Score=26.11 Aligned_cols=14 Identities=14% Similarity=0.337 Sum_probs=4.9
Q ss_pred cCEEEeecCCCCcC
Q psy3567 55 TGVINLSHQGFKEF 68 (277)
Q Consensus 55 L~~L~l~~~~i~~~ 68 (277)
|++|++++|+++++
T Consensus 3 L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 3 LRTLDLSNNRLTSL 16 (17)
T ss_dssp -SEEEETSS--SSE
T ss_pred cCEEECCCCCCCCC
Confidence 44444444444433
No 72
>KOG0473|consensus
Probab=94.32 E-value=0.0023 Score=51.37 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=69.3
Q ss_pred HhhhccCccCEEEeecCCCCcCChhHHHhhccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCc
Q psy3567 47 RHFETAKKTGVINLSHQGFKEFPDEMNELKAVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLE 126 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~ 126 (277)
..+....+.+.||++.+++..+-..+..+ +.+..|+++.|++..+|..+.++..++.++...|..+..|.+++..+.++
T Consensus 36 ~ei~~~kr~tvld~~s~r~vn~~~n~s~~-t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k 114 (326)
T KOG0473|consen 36 REIASFKRVTVLDLSSNRLVNLGKNFSIL-TRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPK 114 (326)
T ss_pred hhhhccceeeeehhhhhHHHhhccchHHH-HHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcc
Confidence 56677777888888888877666665555 77778888888888888888888888888888888888888888888888
Q ss_pred eeeccccccc
Q psy3567 127 NVSGNCNLIK 136 (277)
Q Consensus 127 ~L~l~~n~~~ 136 (277)
++++-.+.+.
T Consensus 115 ~~e~k~~~~~ 124 (326)
T KOG0473|consen 115 KNEQKKTEFF 124 (326)
T ss_pred hhhhccCcch
Confidence 8887777644
No 73
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.03 E-value=0.044 Score=27.79 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=13.3
Q ss_pred CccCEEEeecCCCCcCChhHH
Q psy3567 53 KKTGVINLSHQGFKEFPDEMN 73 (277)
Q Consensus 53 ~~L~~L~l~~~~i~~~~~~~~ 73 (277)
++|+.|++++|+|+.+|+..+
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 456666666666666666554
No 74
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.03 E-value=0.044 Score=27.79 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=13.3
Q ss_pred CccCEEEeecCCCCcCChhHH
Q psy3567 53 KKTGVINLSHQGFKEFPDEMN 73 (277)
Q Consensus 53 ~~L~~L~l~~~~i~~~~~~~~ 73 (277)
++|+.|++++|+|+.+|+..+
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 456666666666666666554
No 75
>KOG0473|consensus
Probab=93.35 E-value=0.0021 Score=51.57 Aligned_cols=83 Identities=22% Similarity=0.251 Sum_probs=65.5
Q ss_pred ccccEEEccCCCCCcCCccccccCCCcEEeccCCcCcccCccccCcccCceeecccccccccchhhhcCCCCCEEEccCC
Q psy3567 77 AVLRTLDISQNKISKFPLDLASYQLLKSLTFDQNKIESLPKDIGTLEKLENVSGNCNLIKELPLSFSKLHNLKHLSLSQN 156 (277)
Q Consensus 77 ~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~l~~L~~L~l~~n~~~~l~~~~~~l~~L~~L~l~~n 156 (277)
...+.||++.|++..+-..|..+..+..++++.|.+..+|+.++....+..++...|.....|.++.+.+.++++++-++
T Consensus 42 kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~k~~ 121 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQKKT 121 (326)
T ss_pred ceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhhhccC
Confidence 67778888888777776677777888888888888888888888887788888888888888888888888888877776
Q ss_pred CCc
Q psy3567 157 QLN 159 (277)
Q Consensus 157 ~l~ 159 (277)
.+.
T Consensus 122 ~~~ 124 (326)
T KOG0473|consen 122 EFF 124 (326)
T ss_pred cch
Confidence 644
No 76
>KOG4341|consensus
Probab=92.91 E-value=0.0076 Score=52.35 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=29.3
Q ss_pred CCceeEecCCCCcCCCCCCceeeeccCCcchhHhhhccCccCEEEeecCC-CC-cCChhHHHhhccccEEEccCC
Q psy3567 15 PSKLTLLLPGKKNRGLIEGTIFVLKMGNSATKRHFETAKKTGVINLSHQG-FK-EFPDEMNELKAVLRTLDISQN 87 (277)
Q Consensus 15 ~~l~~l~l~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~L~~L~l~~~~-i~-~~~~~~~~~~~~L~~L~l~~~ 87 (277)
..+++|.++|+.--+.-+ +...-..++++..|.+.++. ++ ..-..+.+.+++++++++..|
T Consensus 138 g~lk~LSlrG~r~v~~ss------------lrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c 200 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSS------------LRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSC 200 (483)
T ss_pred cccccccccccccCCcch------------hhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhccc
Confidence 356667666665433321 12334455566655555553 22 111233444455566655553
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.57 E-value=0.2 Score=25.27 Aligned_cols=17 Identities=47% Similarity=0.686 Sum_probs=7.7
Q ss_pred CCCEEEccCCCCcccCc
Q psy3567 170 HLDVLDLSFNRIESIPD 186 (277)
Q Consensus 170 ~L~~L~l~~n~l~~l~~ 186 (277)
+|++|++++|.++.+|.
T Consensus 3 ~L~~L~L~~N~l~~lp~ 19 (26)
T smart00370 3 NLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCEEECCCCcCCcCCH
Confidence 34444444444444443
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.57 E-value=0.2 Score=25.27 Aligned_cols=17 Identities=47% Similarity=0.686 Sum_probs=7.7
Q ss_pred CCCEEEccCCCCcccCc
Q psy3567 170 HLDVLDLSFNRIESIPD 186 (277)
Q Consensus 170 ~L~~L~l~~n~l~~l~~ 186 (277)
+|++|++++|.++.+|.
T Consensus 3 ~L~~L~L~~N~l~~lp~ 19 (26)
T smart00369 3 NLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCEEECCCCcCCcCCH
Confidence 34444444444444443
No 79
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=89.68 E-value=0.12 Score=25.60 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=9.3
Q ss_pred CCccEEEcCCCeeeecccc
Q psy3567 239 SNVCTLNVEGNLFEMKAFQ 257 (277)
Q Consensus 239 ~~L~~l~l~~n~~~~~~~~ 257 (277)
++|++|++++|.++.+.++
T Consensus 2 ~~L~~L~l~~n~i~~~g~~ 20 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGAS 20 (24)
T ss_dssp TT-SEEE-TSSBEHHHHHH
T ss_pred CCCCEEEccCCcCCHHHHH
Confidence 4556666666665554443
No 80
>KOG3864|consensus
Probab=85.82 E-value=0.16 Score=40.13 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=35.0
Q ss_pred CCCCCEEEcCCCc-cccCccCccccCCCCccEEEcCCCeeeeccccccccchhhhhhhhhccCCC
Q psy3567 213 CVRLKILRLEENC-LAINAIPTCILTSSNVCTLNVEGNLFEMKAFQQLDGYNNYMDSELQRSGLL 276 (277)
Q Consensus 213 ~~~L~~L~l~~n~-~~~~~~~~~~~~~~~L~~l~l~~n~~~~~~~~~l~~~~~~~~~~~~~~~~~ 276 (277)
.++|+.|++++|+ |+.+.+ .++.++++|+.|.+.+= +...........++..+|+|-|+
T Consensus 150 ~~~L~~L~lsgC~rIT~~GL-~~L~~lknLr~L~l~~l----~~v~~~e~~~~~Le~aLP~c~I~ 209 (221)
T KOG3864|consen 150 APSLQDLDLSGCPRITDGGL-ACLLKLKNLRRLHLYDL----PYVANLELVQRQLEEALPKCDIV 209 (221)
T ss_pred ccchheeeccCCCeechhHH-HHHHHhhhhHHHHhcCc----hhhhchHHHHHHHHHhCccccee
Confidence 3677888888775 664333 56667777777776652 22333444445555556666553
No 81
>KOG3864|consensus
Probab=80.38 E-value=0.47 Score=37.54 Aligned_cols=17 Identities=12% Similarity=0.302 Sum_probs=8.4
Q ss_pred HhhhccCccCEEEeecC
Q psy3567 47 RHFETAKKTGVINLSHQ 63 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~ 63 (277)
..+..++.++.|.+.+|
T Consensus 119 e~L~~l~~i~~l~l~~c 135 (221)
T KOG3864|consen 119 EHLRDLRSIKSLSLANC 135 (221)
T ss_pred HHHhccchhhhheeccc
Confidence 34444455555555555
No 82
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=79.92 E-value=1.3 Score=22.52 Aligned_cols=17 Identities=29% Similarity=0.673 Sum_probs=9.2
Q ss_pred cccEEEccCCCCCcCCc
Q psy3567 78 VLRTLDISQNKISKFPL 94 (277)
Q Consensus 78 ~L~~L~l~~~~i~~~~~ 94 (277)
+|+.|+.++|+++.+|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 45555555555555553
No 83
>KOG1947|consensus
Probab=76.80 E-value=0.41 Score=43.17 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=19.0
Q ss_pred CCCCCEEEcCCCc-cccCccCccccCCCCccEEEcCCC
Q psy3567 213 CVRLKILRLEENC-LAINAIPTCILTSSNVCTLNVEGN 249 (277)
Q Consensus 213 ~~~L~~L~l~~n~-~~~~~~~~~~~~~~~L~~l~l~~n 249 (277)
|++|+.|.+.++. +++..+......++.|++|+++++
T Consensus 268 c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c 305 (482)
T KOG1947|consen 268 CPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGC 305 (482)
T ss_pred CCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecC
Confidence 5556665555444 443344334444555666665554
No 84
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=74.48 E-value=1.3 Score=22.88 Aligned_cols=14 Identities=14% Similarity=0.214 Sum_probs=6.6
Q ss_pred CccEEEcCCCeeee
Q psy3567 240 NVCTLNVEGNLFEM 253 (277)
Q Consensus 240 ~L~~l~l~~n~~~~ 253 (277)
+|++|+|++|.++.
T Consensus 3 ~L~~LdL~~N~i~~ 16 (28)
T smart00368 3 SLRELDLSNNKLGD 16 (28)
T ss_pred ccCEEECCCCCCCH
Confidence 34445555554443
No 85
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=73.15 E-value=3.2 Score=21.08 Aligned_cols=15 Identities=40% Similarity=0.532 Sum_probs=8.2
Q ss_pred CCCcEEeccCCcCcc
Q psy3567 100 QLLKSLTFDQNKIES 114 (277)
Q Consensus 100 ~~L~~L~l~~~~i~~ 114 (277)
.+|+.|+++.|+|..
T Consensus 2 ~~L~~L~L~~NkI~~ 16 (26)
T smart00365 2 TNLEELDLSQNKIKK 16 (26)
T ss_pred CccCEEECCCCccce
Confidence 345555666655543
No 86
>KOG4242|consensus
Probab=72.96 E-value=16 Score=33.04 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=61.3
Q ss_pred CCCEEEccCCCCccCcc---ccCCCCCCCEEEccCCCCc--ccCchhc--------cc-eeeEEEccCCccCcCCc----
Q psy3567 147 NLKHLSLSQNQLNKFPT---VLFNLQHLDVLDLSFNRIE--SIPDGIG--------KM-KVIEMNLNKNQICHISP---- 208 (277)
Q Consensus 147 ~L~~L~l~~n~l~~~~~---~l~~~~~L~~L~l~~n~l~--~l~~~~~--------~~-~l~~L~l~~n~l~~l~~---- 208 (277)
.++.+...+|....-.. .....+..+.+++++..-. ..+.... .. -+..+.++.|.+..-+.
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 47888888877662222 2334567777777665432 1111111 11 25667777777763332
Q ss_pred CccCCCCCCEEEcCCCccccCc---cCccccCCCCccEEEcCCCeeeec
Q psy3567 209 DISECVRLKILRLEENCLAINA---IPTCILTSSNVCTLNVEGNLFEMK 254 (277)
Q Consensus 209 ~l~~~~~L~~L~l~~n~~~~~~---~~~~~~~~~~L~~l~l~~n~~~~~ 254 (277)
.+..-+.+..|++++|...+.. +|........++.+..+.|..+..
T Consensus 435 ~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~p~~~ 483 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNLPEDP 483 (553)
T ss_pred hhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCCcccc
Confidence 2445567889999999876432 333344445677777777755543
No 87
>KOG4341|consensus
Probab=72.05 E-value=2.3 Score=37.54 Aligned_cols=172 Identities=16% Similarity=0.067 Sum_probs=95.5
Q ss_pred hccCccCEEEeecCC-CCcCC-hhHHHhhccccEEEccCCCC-CcCC-cc-ccccCCCcEEeccCCc-CcccC-ccc-cC
Q psy3567 50 ETAKKTGVINLSHQG-FKEFP-DEMNELKAVLRTLDISQNKI-SKFP-LD-LASYQLLKSLTFDQNK-IESLP-KDI-GT 121 (277)
Q Consensus 50 ~~~~~L~~L~l~~~~-i~~~~-~~~~~~~~~L~~L~l~~~~i-~~~~-~~-~~~l~~L~~L~l~~~~-i~~~~-~~~-~~ 121 (277)
+.+..+.++++..|. ++... -.+...+..++.|+.+++.- +..+ .. -.+.++|+.+-++.++ ++..- ..+ .+
T Consensus 265 ~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn 344 (483)
T KOG4341|consen 265 AYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRN 344 (483)
T ss_pred ccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcC
Confidence 445566777766663 33221 12344457888888887743 2111 11 2456888888888875 33221 112 24
Q ss_pred cccCceeecccccccc---cchhhhcCCCCCEEEccCCCCc-c-----CccccCCCCCCCEEEccCCCCc--ccCchhcc
Q psy3567 122 LEKLENVSGNCNLIKE---LPLSFSKLHNLKHLSLSQNQLN-K-----FPTVLFNLQHLDVLDLSFNRIE--SIPDGIGK 190 (277)
Q Consensus 122 l~~L~~L~l~~n~~~~---l~~~~~~l~~L~~L~l~~n~l~-~-----~~~~l~~~~~L~~L~l~~n~l~--~l~~~~~~ 190 (277)
++.|+.+++..+.... +.+.-...+.|+.+.++.+... . +......+..+..+-++++... ..-.....
T Consensus 345 ~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~ 424 (483)
T KOG4341|consen 345 CPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSI 424 (483)
T ss_pred ChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhh
Confidence 6678888877776552 3333345677888888866443 1 1222334677888888888543 22222333
Q ss_pred c-eeeEEEccCCc-cC--cCCcCccCCCCCCEEEc
Q psy3567 191 M-KVIEMNLNKNQ-IC--HISPDISECVRLKILRL 221 (277)
Q Consensus 191 ~-~l~~L~l~~n~-l~--~l~~~l~~~~~L~~L~l 221 (277)
. .++.+++-+++ ++ .+...-.++|++++..+
T Consensus 425 c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v~a~ 459 (483)
T KOG4341|consen 425 CRNLERIELIDCQDVTKEAISRFATHLPNIKVHAY 459 (483)
T ss_pred CcccceeeeechhhhhhhhhHHHHhhCccceehhh
Confidence 3 36677776665 22 23333445666665554
No 88
>KOG3763|consensus
Probab=62.92 E-value=2.1 Score=39.08 Aligned_cols=61 Identities=30% Similarity=0.440 Sum_probs=36.1
Q ss_pred cCCCCCEEEccCCCCccCc---cccCCCCCCCEEEccCC--CCcccCc--hhccceeeEEEccCCccC
Q psy3567 144 KLHNLKHLSLSQNQLNKFP---TVLFNLQHLDVLDLSFN--RIESIPD--GIGKMKVIEMNLNKNQIC 204 (277)
Q Consensus 144 ~l~~L~~L~l~~n~l~~~~---~~l~~~~~L~~L~l~~n--~l~~l~~--~~~~~~l~~L~l~~n~l~ 204 (277)
+.+.+..+++++|++..+. .-....++|.+|+|++| .+...+. .++..++++|.+.+|.++
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 4456677777777766442 11224678888888887 3322111 123345777888888776
No 89
>KOG3763|consensus
Probab=61.63 E-value=3.8 Score=37.45 Aligned_cols=60 Identities=27% Similarity=0.227 Sum_probs=25.1
Q ss_pred CCCCCEEEccCCCCcccCch--h-cc-ceeeEEEccCC--ccCcCCcC-ccCCCCCCEEEcCCCccc
Q psy3567 168 LQHLDVLDLSFNRIESIPDG--I-GK-MKVIEMNLNKN--QICHISPD-ISECVRLKILRLEENCLA 227 (277)
Q Consensus 168 ~~~L~~L~l~~n~l~~l~~~--~-~~-~~l~~L~l~~n--~l~~l~~~-l~~~~~L~~L~l~~n~~~ 227 (277)
.+.+..+.+++|++..+... + .. .++..|+|++| .+..-+.. -.....|++|.+.||++.
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccc
Confidence 44555555566655432211 1 11 13555566555 22211110 112234555555565554
No 90
>KOG1947|consensus
Probab=61.47 E-value=5.2 Score=35.98 Aligned_cols=89 Identities=15% Similarity=0.074 Sum_probs=46.0
Q ss_pred HhhhccCccCEEEeecC--CCCcCC---hhHHHhhccccEEEccCCC-CCcCCc-cc-cccCCCcEEeccCCc-Cc--cc
Q psy3567 47 RHFETAKKTGVINLSHQ--GFKEFP---DEMNELKAVLRTLDISQNK-ISKFPL-DL-ASYQLLKSLTFDQNK-IE--SL 115 (277)
Q Consensus 47 ~~l~~~~~L~~L~l~~~--~i~~~~---~~~~~~~~~L~~L~l~~~~-i~~~~~-~~-~~l~~L~~L~l~~~~-i~--~~ 115 (277)
.....++.|+.|+++++ .+...+ ..+...+.+++.|++.++. ++...- .+ ..+++|++|.+.++. ++ .+
T Consensus 208 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl 287 (482)
T KOG1947|consen 208 ALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGL 287 (482)
T ss_pred HHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHH
Confidence 45566777777777762 111111 1233334667777777665 432211 12 125667777766554 43 22
Q ss_pred CccccCcccCceeecccccc
Q psy3567 116 PKDIGTLEKLENVSGNCNLI 135 (277)
Q Consensus 116 ~~~~~~l~~L~~L~l~~n~~ 135 (277)
......++.|++++++.+..
T Consensus 288 ~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 288 VSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred HHHHHhcCcccEEeeecCcc
Confidence 23344566677777665543
No 91
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=48.67 E-value=12 Score=18.53 Aligned_cols=13 Identities=31% Similarity=0.483 Sum_probs=8.3
Q ss_pred CCCCCEEEcCCCc
Q psy3567 213 CVRLKILRLEENC 225 (277)
Q Consensus 213 ~~~L~~L~l~~n~ 225 (277)
|++|++|++++|.
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 4566677776664
No 92
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=37.94 E-value=21 Score=39.35 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=17.7
Q ss_pred ccCCccCcCCcC-ccCCCCCCEEEcCCCccc
Q psy3567 198 LNKNQICHISPD-ISECVRLKILRLEENCLA 227 (277)
Q Consensus 198 l~~n~l~~l~~~-l~~~~~L~~L~l~~n~~~ 227 (277)
|++|+|+.|+.. |..+++|+.|+|++|++.
T Consensus 2 LSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 2 ISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 455666665554 445566666666666654
No 93
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=25.86 E-value=43 Score=37.15 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=12.6
Q ss_pred hhhccCccCEEEeecCCCC
Q psy3567 48 HFETAKKTGVINLSHQGFK 66 (277)
Q Consensus 48 ~l~~~~~L~~L~l~~~~i~ 66 (277)
.|..+++|+.|+|++|.+.
T Consensus 14 ~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 14 ICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred HhccCCCceEEEeeCCccc
Confidence 4556667777777777655
Done!