RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy357
(132 letters)
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 339
Score = 84.8 bits (208), Expect = 3e-21
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 32 VPDIVMKESQDPSDPYFPFQWYLKNTGQNGGKAKLDLNVEAAWAQGVTGRNITTAIMDDG 91
+P ++ +DP F QW+L N G D+NV W +TG + AI+DDG
Sbjct: 1 LPVKEAEDKLSINDPLFERQWHLVNPSFPG----SDINVLDLWYNNITGAGVVAAIVDDG 56
Query: 92 VDYMHMDLKNNYNAKASYDFSSNDPHPYPRYTDDWFNRWN 131
+DY + DLK+N+ A+ S+DF+ N P PR +DD+
Sbjct: 57 LDYENEDLKDNFCAEGSWDFNDNTNLPKPRLSDDYHGTRC 96
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 334
Score = 79.8 bits (195), Expect = 2e-19
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 41 QDPSDPYFPFQWYLKNTGQNGGKAKLDLNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLK 100
Q+P+DP FP QWYL Q DLNV+ AWAQG TG I +I+DDG++ H DL
Sbjct: 3 QEPTDPKFPQQWYLSGVTQR------DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLA 56
Query: 101 NNYNAKASYDFSSNDPHPYPRYTDDWFNRWNN 132
NY+ AS+D + DP P PRYT NR
Sbjct: 57 GNYDPGASFDVNDQDPDPQPRYTQMNDNRHGT 88
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans
[TaxId: 93466]}
Length = 671
Score = 55.8 bits (133), Expect = 9e-11
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 13/88 (14%)
Query: 39 ESQDPSDPYFPFQWYLKNTGQNGGKAKLDLNVEAAWAQGVTGRNITTAIMDDGVDYMHMD 98
++D + W L+ + V + +G NI A++D GVD H D
Sbjct: 123 TARDYGEELSNELWGLEA-----------IGVTQQLWEEASGTNIIVAVVDTGVDGTHPD 171
Query: 99 LKNNYNAKASYDFSSNDPHPYPRYTDDW 126
L+ A Y + ++ P +
Sbjct: 172 LEGQVI--AGYRPAFDEELPAGTDSSYG 197
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp.,
AK.1 [TaxId: 1409]}
Length = 280
Score = 54.6 bits (130), Expect = 2e-10
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 15/94 (15%)
Query: 43 PSDPYFP-FQWYLKNTGQNGGKAKLDLNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKN 101
P+D Y+ +Q+ +NT + AW A++D GVDY H DL
Sbjct: 3 PNDTYYQGYQYGPQNT-----------YTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG 51
Query: 102 NYNA---KASYDFSSNDPHPYPRYTDDWFNRWNN 132
D+ D + + + N
Sbjct: 52 KVIKGYDFVDNDYDPMDLNNHGTHVAGIAAAETN 85
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg
[TaxId: 1423]}
Length = 274
Score = 50.3 bits (119), Expect = 7e-09
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 68 LNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPY 119
+ + AQG G N+ A++D G+ H DL N F + + +
Sbjct: 11 IKADKVQAQGFKGANVKVAVLDTGIQASHPDL----NVVGGASFVAGEAYNT 58
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens,
Novo/BPN' [TaxId: 1390]}
Length = 281
Score = 49.9 bits (118), Expect = 8e-09
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 68 LNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYP 120
+ A +QG TG N+ A++D G+D H DLK ++ +P+
Sbjct: 11 IKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAG----GASMVPSETNPFQ 59
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris
[TaxId: 2026]}
Length = 279
Score = 48.2 bits (113), Expect = 3e-08
Identities = 22/88 (25%), Positives = 27/88 (30%), Gaps = 13/88 (14%)
Query: 43 PSDPYFPFQWYLKNTGQNGGKAKLDLNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNN 102
P+DPYF + Y + AW G AI+D GV H DL
Sbjct: 3 PNDPYFSSRQYGPQ----------KIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK 51
Query: 103 YNAKASYDFSSNDPHPYPRYTDDWFNRW 130
+DF ND P
Sbjct: 52 V--VGGWDFVDNDSTPQNGNGHGTHCAG 77
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId:
1421]}
Length = 309
Score = 45.3 bits (105), Expect = 3e-07
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 68 LNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYPRYTDDWF 127
+ G I A++D GV+ H DL NN + DF+ TD
Sbjct: 13 IYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNV--EQCKDFTGATTPINNSCTDRNG 70
Query: 128 N 128
+
Sbjct: 71 H 71
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]}
Length = 269
Score = 44.2 bits (103), Expect = 7e-07
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 68 LNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPY 119
+ AA +G+TG + A++D G+ H DL N + F +P
Sbjct: 11 VQAPAAHNRGLTGSGVKVAVLDTGIST-HPDL----NIRGGASFVPGEPSTQ 57
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus
novosp. MN-32, kumamolisin [TaxId: 198803]}
Length = 357
Score = 43.6 bits (101), Expect = 1e-06
Identities = 8/58 (13%), Positives = 16/58 (27%)
Query: 67 DLNVEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYPRYTD 124
D+ + +G+ G+ AI+ G Y L + +
Sbjct: 10 DVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQ 67
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1
{Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Length = 435
Score = 41.2 bits (95), Expect = 1e-05
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 70 VEAAWAQGVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPY 119
V A N T I+D G D H DL N + + N P
Sbjct: 11 VGATVLSDSQAGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPG 60
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium
album), strain limber [TaxId: 37998]}
Length = 279
Score = 39.7 bits (91), Expect = 3e-05
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 79 TGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYPRYT 123
G+ ++D G++ H + + +Y +SS D + + +
Sbjct: 29 AGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHC 73
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43,
N-terminal domain {Bacillus sp. KSM-KP43 [TaxId:
109322]}
Length = 318
Score = 38.3 bits (87), Expect = 1e-04
Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 68 LNVEAAWAQ-GVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYPRYTDDW 126
+ + A + G+ G+ A+ D G+D D + + +
Sbjct: 8 VKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDTNG 67
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas
sp., sedolisin [TaxId: 306]}
Length = 369
Score = 28.0 bits (61), Expect = 0.29
Identities = 6/49 (12%), Positives = 11/49 (22%)
Query: 77 GVTGRNITTAIMDDGVDYMHMDLKNNYNAKASYDFSSNDPHPYPRYTDD 125
T N T I+ G + + + + D
Sbjct: 21 APTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGD 69
>d1ztpa1 d.86.1.2 (A:17-250) Basophilic leukemia expressed protein
BLES03 {Human (Homo sapiens) [TaxId: 9606]}
Length = 234
Score = 23.7 bits (51), Expect = 9.4
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 105 AKASYDFSSNDPHPYPRYTDDWFNR 129
AK S YTDD+ +R
Sbjct: 142 AKVSPRAKEGGRQVICVYTDDFTDR 166
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.422
Gapped
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 544,359
Number of extensions: 23292
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 19
Length of query: 132
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 56
Effective length of database: 1,364,116
Effective search space: 76390496
Effective search space used: 76390496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.1 bits)