Query psy358
Match_columns 176
No_of_seqs 85 out of 102
Neff 3.4
Searched_HMMs 29240
Date Fri Aug 16 20:15:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w51_A Protein arMet; MANF, CD 100.0 1.6E-78 5.6E-83 490.1 4.1 151 26-176 1-158 (158)
2 2w50_A ArMet-like protein 1; M 100.0 3E-54 1E-58 328.3 3.0 99 28-126 2-102 (102)
3 2do1_A Nuclear protein HCC-1; 98.4 3.7E-07 1.3E-11 62.4 4.3 41 129-171 7-47 (55)
4 1zrj_A E1B-55KDA-associated pr 97.6 5.3E-05 1.8E-09 50.7 4.4 40 127-168 5-44 (50)
5 1h1j_S THO1 protein; SAP domai 97.4 0.00016 5.5E-09 48.5 4.1 37 130-168 3-39 (51)
6 2kvu_A MKL/myocardin-like prot 97.2 0.00041 1.4E-08 50.2 4.4 38 129-168 23-60 (75)
7 1y02_A CARP2, FYVE-ring finger 97.0 0.00028 9.5E-09 54.2 2.5 41 129-169 73-113 (120)
8 3bqp_A Proactivator polypeptid 95.0 0.02 7E-07 38.3 3.5 75 28-110 2-76 (80)
9 1jjr_A KU70, thyroid autoantig 95.0 0.017 5.8E-07 46.1 3.5 42 127-170 56-97 (151)
10 2rnn_A E3 SUMO-protein ligase 94.5 0.029 9.8E-07 43.2 3.6 40 129-170 34-73 (114)
11 1of9_A Pore-forming peptide am 94.0 0.026 8.8E-07 39.0 2.2 74 28-110 2-75 (77)
12 2js9_A Saposin-like protein fa 94.0 0.013 4.6E-07 43.0 0.8 77 24-110 17-96 (99)
13 1n69_A Saposin B; lipid bindin 93.8 0.034 1.2E-06 38.4 2.6 72 29-109 4-76 (81)
14 2qyp_A Proactivator polypeptid 93.3 0.044 1.5E-06 38.3 2.4 75 28-110 5-79 (91)
15 2gtg_A Proactivator polypeptid 92.9 0.025 8.4E-07 38.7 0.6 76 27-110 3-78 (83)
16 1nkl_A NK-lysin; saposin fold, 92.7 0.066 2.3E-06 36.9 2.6 72 30-110 3-74 (78)
17 1l9l_A Granulysin; saposin fol 91.4 0.051 1.7E-06 37.9 0.8 72 30-110 3-74 (74)
18 1jjr_A KU70, thyroid autoantig 89.6 0.065 2.2E-06 42.7 0.0 40 128-169 111-150 (151)
19 4ddj_A Saposin-A, protein A; s 89.0 0.12 4E-06 35.3 1.0 75 29-110 4-79 (83)
20 2out_A MU-like prophage flumu 83.9 0.39 1.3E-05 37.8 1.6 40 129-168 86-125 (131)
21 3rfi_A Asp; PSI, saposin, hydr 62.3 2.9 9.9E-05 30.4 1.4 38 27-66 69-106 (108)
22 1jey_A KU70; double-strand DNA 61.5 1.7 5.8E-05 39.9 0.0 41 127-169 568-608 (609)
23 3s64_A AC-SLP-1, saposin-like 61.5 0.99 3.4E-05 32.9 -1.2 73 29-111 11-86 (87)
24 2rno_A Putative DNA-binding pr 55.6 9.8 0.00034 29.1 3.3 35 131-167 16-50 (110)
25 3s63_A Na-SLP-1, saposin-like 54.6 9.1 0.00031 29.4 3.0 75 30-111 6-80 (117)
26 1jy2_N Fibrinogen alpha chain; 35.9 11 0.00038 25.5 0.8 26 145-170 14-47 (53)
27 1q1v_A DEK protein; winged-hel 29.7 56 0.0019 22.4 3.6 38 127-165 25-62 (70)
28 2a2p_A Selenoprotein M, SELM p 26.8 33 0.0011 26.6 2.2 26 128-153 70-95 (129)
29 2lv7_A Calcium-binding protein 25.1 1E+02 0.0035 21.1 4.3 40 130-169 28-67 (100)
30 1utr_A Uteroglobin; clara cell 24.7 20 0.00069 25.8 0.6 19 29-47 19-37 (96)
No 1
>2w51_A Protein arMet; MANF, CDNF, saposin, secreted, ER stress, phosphoprotein, neurotrophic factor, sialic acid, glycoprotein, growth factor, hormone; 2.80A {Homo sapiens} PDB: 2kvd_A 2rqy_A 2kve_A
Probab=100.00 E-value=1.6e-78 Score=490.08 Aligned_cols=151 Identities=52% Similarity=1.024 Sum_probs=133.7
Q ss_pred cCCCCCcchHHHHHHHHHhcch-hhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHH
Q psy358 26 VTKENCEVCVTVVEKFADRLTP-EAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATK 104 (176)
Q Consensus 26 ~~~~dCEVCv~~l~~f~~sl~~-~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~K 104 (176)
+++|+||||++||++|+++|.+ +++++++.||++|++||++++||||||||||||++||||+|++|||+|||||||++|
T Consensus 1 ~~~~~CEVCv~~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~k~KEnr~CYyiga~~dsAt~il~evs~PlS~~mP~~K 80 (158)
T 2w51_A 1 LRPGDCEVCISYLGRFYQDLKDRDVTFSPATIENELIKFCREARGKENRLCYYIGATDDAATKIINEVSKPLAHHIPVEK 80 (158)
T ss_dssp CCTTSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTCCHHHHHHHHHTTCSSSCCCGGGHHHHHHHHTTCCHHH
T ss_pred CCCcCCchhHHHHHHHHHhccccccccCHHHHHHHHHHHHhhccCCccceeEecCCchHHHHHHHHHhccccccCCCHHH
Confidence 4689999999999999999999 678899999999999999999999999999999999999999999999999999999
Q ss_pred HhHHhcccCcccccccccccccccccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCccch------hccC
Q psy358 105 ICEKLKKSDSQICDLRYDKQIDFKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKPKYV------REEL 176 (176)
Q Consensus 105 ICekLkkkD~QICelkYdk~iD~~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~k~~------~~el 176 (176)
|||||+++|||||||||+|+|||+++||+||||+|||+||++||++|+||+||+|||+||+|++|||+ |+||
T Consensus 81 iCekLkkkDsqICelkY~k~iDl~~~Dl~KlrVkeLK~IL~d~g~~C~GC~EK~DfV~ri~el~pk~~p~~a~~~~eL 158 (158)
T 2w51_A 81 ICEKLKKKDSQICELKYDKQIDLSTVDLKKLRVKELKKILDDWGETCKGCAEKSDYIRKINELMPKYAPKAASARTDL 158 (158)
T ss_dssp HHHHHHHHCSTTTTCCCCCCCCCCCSSCCTTHHHHHHHHTTCCCTTCSSCHHHHTTC---------------------
T ss_pred HHHHHhccchhhhhhccccccCcccCChhhccHHHHHHHHHHcCCCCCchhhhHHHHHHHHHhcccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999995 8887
No 2
>2w50_A ArMet-like protein 1; MANF, CDNF, saposin, secreted, ER stress, alternative splicing, hormone, growth factor, neurotrophic factor; 1.60A {Homo sapiens}
Probab=100.00 E-value=3e-54 Score=328.27 Aligned_cols=99 Identities=49% Similarity=0.904 Sum_probs=93.8
Q ss_pred CC-CCcchHHHHHHHHHhcch-hhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHH
Q psy358 28 KE-NCEVCVTVVEKFADRLTP-EAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKI 105 (176)
Q Consensus 28 ~~-dCEVCv~~l~~f~~sl~~-~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KI 105 (176)
++ +||||++||++|+++|.+ +++++++.||++|++||++++||||||||||||++||||+|++|||+|||||||++||
T Consensus 2 ~~~~CEVCvk~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~k~KEnr~CYyiga~~dsat~il~evskPlS~~mP~~Ki 81 (102)
T 2w50_A 2 PGADCEVCKEFLNRFYKSLIDRGVNFSLDTIEKELISFCLDTKGKENRLCYYLGATKDAATKILSEVTRPMSVHMPAMKI 81 (102)
T ss_dssp --CTTHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTCCHHHHHHHHHTTCSTTSCHHHHHHHHHHHTTTCCHHHH
T ss_pred CCCCchhhHHHHHHHHHhcchhccccCHHHHHHHHHHHHhhccCCccceeEecCCchHHHHHHHHHhccccccCCCHHHH
Confidence 56 999999999999999999 6788999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhcccCccccccccccccc
Q psy358 106 CEKLKKSDSQICDLRYDKQID 126 (176)
Q Consensus 106 CekLkkkD~QICelkYdk~iD 126 (176)
||||+++|||||||||+|+||
T Consensus 82 CekLkkkDsqICelkY~k~iD 102 (102)
T 2w50_A 82 CEKLKKLDSQICELKYEKTLD 102 (102)
T ss_dssp HHHHHTTCGGGGTCCCCCC--
T ss_pred HHHHhccchhhhhccccccCC
Confidence 999999999999999999998
No 3
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=98.36 E-value=3.7e-07 Score=62.35 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=37.9
Q ss_pred ccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCccc
Q psy358 129 TVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKPKY 171 (176)
Q Consensus 129 ~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~k~ 171 (176)
.+|+++|+|.|||++|..||.+|.| .|+|+|.||++.....
T Consensus 7 ~~~l~klkV~eLK~~L~~rGL~~~G--~KaeLieRL~~~l~~~ 47 (55)
T 2do1_A 7 GVELHKLKLAELKQECLARGLETKG--IKQDLIHRLQAYLEEH 47 (55)
T ss_dssp CCCTTTSCHHHHHHHHHHHTCCCCS--CHHHHHHHHHHHHHHT
T ss_pred ccCHHHCcHHHHHHHHHHcCCCCCC--cHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999 8999999999986554
No 4
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=97.65 E-value=5.3e-05 Score=50.72 Aligned_cols=40 Identities=23% Similarity=0.413 Sum_probs=36.2
Q ss_pred ccccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhC
Q psy358 127 FKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELK 168 (176)
Q Consensus 127 ~~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~ 168 (176)
++.+|+++|+|.|||+.|..||.++.|= |.|.|.|+.+..
T Consensus 5 ~s~~~~~klkV~eLK~eLk~RgL~~~G~--Ka~Li~RL~~~~ 44 (50)
T 1zrj_A 5 SSGMDVRRLKVNELREELQRRGLDTRGL--KAELAERLQAAL 44 (50)
T ss_dssp SCCCCGGGSCHHHHHHHHHHTTCCCCSC--HHHHHHHHHHHH
T ss_pred cCcCCHHHCcHHHHHHHHHHcCCCCCCc--HHHHHHHHHHHH
Confidence 3468999999999999999999999984 999999999864
No 5
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=97.40 E-value=0.00016 Score=48.51 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=34.2
Q ss_pred cccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhC
Q psy358 130 VDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELK 168 (176)
Q Consensus 130 ~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~ 168 (176)
.|+++|+|.|||..|..||.++.|= |.|.|.|+.+.-
T Consensus 3 ~~~~kltV~eLK~~Lk~RGL~~~G~--KadLieRL~~~~ 39 (51)
T 1h1j_S 3 ADYSSLTVVQLKDLLTKRNLSVGGL--KNELVQRLIKDD 39 (51)
T ss_dssp CSGGGCCHHHHHHHHHHTTCCCCSS--HHHHHHHHHHHH
T ss_pred chHHHCcHHHHHHHHHHcCCCCCCc--HHHHHHHHHHHH
Confidence 5899999999999999999999985 999999998764
No 6
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=97.17 E-value=0.00041 Score=50.15 Aligned_cols=38 Identities=26% Similarity=0.431 Sum_probs=35.0
Q ss_pred ccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhC
Q psy358 129 TVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELK 168 (176)
Q Consensus 129 ~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~ 168 (176)
..|+++|+|.|||+.|..||.++.|= |+|.|.|+++..
T Consensus 23 ~~~l~klkVaeLK~eLk~RGL~~sG~--KaeLIeRL~~~~ 60 (75)
T 2kvu_A 23 PANLDDMKVAELKQELKLRSLPVSGT--KTELIERLRAYQ 60 (75)
T ss_dssp CTTTTTSCHHHHHHHHHHTTCCCCSC--HHHHHHHHHHHH
T ss_pred hHHHHHCcHHHHHHHHHHcCCCCCCC--HHHHHHHHHHHH
Confidence 57999999999999999999999994 999999999863
No 7
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=97.02 E-value=0.00028 Score=54.22 Aligned_cols=41 Identities=27% Similarity=0.444 Sum_probs=36.9
Q ss_pred ccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCc
Q psy358 129 TVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKP 169 (176)
Q Consensus 129 ~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~ 169 (176)
..+|.+|+|++|++.|..++.+..||+||+|+|..|-...+
T Consensus 73 ~~~l~~lkvkdL~~yL~~~~I~~~~c~EKedLv~lvl~~~~ 113 (120)
T 1y02_A 73 REELMKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQP 113 (120)
T ss_dssp HHHHHTSCHHHHHHHHHHTTCCCTTCCSHHHHHHHHHHTCC
T ss_pred HHHHhcccHHHHHHHHHhCCCCcccceeHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999999876543
No 8
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=94.98 E-value=0.02 Score=38.31 Aligned_cols=75 Identities=23% Similarity=0.295 Sum_probs=55.9
Q ss_pred CCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhH
Q psy358 28 KENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICE 107 (176)
Q Consensus 28 ~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICe 107 (176)
...|++|.-+++.+.+.|.. ..+.+.|.+++.+.|....+.-...|..+- +.-...|+..+. -++.++.||.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~--~~t~~~I~~~l~~~C~~lp~~~~~~C~~~v--~~y~~~ii~~l~----~~~~P~~iC~ 73 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEK--NSTKQEILAALEKGCSFLPDPYQKQCDQFV--AEYEPVLIEILV----EVMDPSFVCL 73 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCT--TCCHHHHHHHHHHHGGGSCGGGHHHHHHHH--HHHHHHHHHHHT----TCCCHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHhCCCccchhhHHHH--HHHHHHHHHHHH----HCCCHHHHHh
Confidence 35799999999999998875 456889999999999987665577787653 122223444443 4789999998
Q ss_pred Hhc
Q psy358 108 KLK 110 (176)
Q Consensus 108 kLk 110 (176)
.|.
T Consensus 74 ~l~ 76 (80)
T 3bqp_A 74 KIG 76 (80)
T ss_dssp HTT
T ss_pred hcC
Confidence 873
No 9
>1jjr_A KU70, thyroid autoantigen; DNA repair protein, protein-DNA interaction, solution structure, DNA binding protein; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=94.98 E-value=0.017 Score=46.11 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=37.1
Q ss_pred ccccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCcc
Q psy358 127 FKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKPK 170 (176)
Q Consensus 127 ~~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~k 170 (176)
|++-.|++|+|.|||.+|..+|....| -|.|.|.||.++-..
T Consensus 56 ~~~g~L~kltV~eLK~~l~~~gL~~~G--kKadLI~Ri~~~l~~ 97 (151)
T 1jjr_A 56 ISKGTLGKFTVPMLKEACRAYGLKSGL--KKQELLEALTKHFQD 97 (151)
T ss_dssp HHHTCTTSSCHHHHHHHHHHHTCCCCS--SSHHHHHHHHHTTCC
T ss_pred HHcCcHHhccHHHHHHHHHHcCCCCcc--cHHHHHHHHHHHHhh
Confidence 456899999999999999999999877 599999999987544
No 10
>2rnn_A E3 SUMO-protein ligase SIZ1; SUMO ligase, DNA binding, sumoylation, metal-binding, nucLeu phosphoprotein, UBL conjugation pathway; NMR {Saccharomyces cerevisiae}
Probab=94.50 E-value=0.029 Score=43.22 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=35.2
Q ss_pred ccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCcc
Q psy358 129 TVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKPK 170 (176)
Q Consensus 129 ~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~k 170 (176)
...++||+|.|||+|+..+|.+..| -|.|.+.||++.-..
T Consensus 34 ~~~l~kLtVaELK~~cr~~GL~~sG--kKaeLi~RI~~yl~~ 73 (114)
T 2rnn_A 34 ITLMELLKVSELKDICRSVSFPVSG--RKAVLQDLIRNFLQN 73 (114)
T ss_dssp HHHHTTCCHHHHHHHHHHTTCCTTS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHcCCCcCC--cHHHHHHHHHHHHHh
Confidence 3569999999999999999999988 499999999987433
No 11
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=94.02 E-value=0.026 Score=39.02 Aligned_cols=74 Identities=16% Similarity=0.354 Sum_probs=54.9
Q ss_pred CCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhH
Q psy358 28 KENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICE 107 (176)
Q Consensus 28 ~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICe 107 (176)
...|++|.-+++.+.+.+..+ +.+.|+++|-+.|....+.-...|=.+= ..-...+.+=+.-+++|+.||.
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n---t~~~I~~~l~~~C~~lp~~~~~~C~~~V------~~y~~~iI~~l~~~~~P~~IC~ 72 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK---GADKVKDYISSLCNKASGFIATLCTKVL------DFGIDKLIQLIEDKVDANAICA 72 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS---CSHHHHHHHHHHHTTCSSTTHHHHHHHH------HHCHHHHHHHHHHTCCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHC---cHHHHHHHHHHHHHcCChHHHHHHHHHH------HHHHHHHHHHHHhCCCHHHHHh
Confidence 467999999999999998774 6789999999999988655566664432 1122334444556889999999
Q ss_pred Hhc
Q psy358 108 KLK 110 (176)
Q Consensus 108 kLk 110 (176)
.|+
T Consensus 73 ~l~ 75 (77)
T 1of9_A 73 KIH 75 (77)
T ss_dssp HHS
T ss_pred hcC
Confidence 875
No 12
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=93.99 E-value=0.013 Score=43.05 Aligned_cols=77 Identities=26% Similarity=0.421 Sum_probs=55.8
Q ss_pred cccCCCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCC---CCcceeeecCcchhhhhhhhhccccccCCC
Q psy358 24 CAVTKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGK---ENRFCYYLGGLEESATGILGELSKPLSWGM 100 (176)
Q Consensus 24 ~~~~~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgK---Enr~CYYiGa~~dsAt~il~evskPlS~~m 100 (176)
.......|.+|.-+++.+.+.+ +.+.+.|+++|.+.|....+. -...|-.+-... ...|+.. |.-++
T Consensus 17 ~~~~~~~C~~C~~vV~~ve~~l----n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~V~~y--~~~II~~----L~~~~ 86 (99)
T 2js9_A 17 RGRSALSCQMCELVVKKYEGSA----DKDANVIKKDFDAECKKLFHTIPFGTRECDHYVNSK--VDPIIHE----LEGGT 86 (99)
T ss_dssp --CCSSTHHHHHHHHHHHTTTS----SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTTTTTT--HHHHHHH----HHHTC
T ss_pred CCCCCCcchhHHHHHHHHHHHH----HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHH--HHHHHHH----HHhCC
Confidence 4456778999999999999888 457899999999999987654 467787664321 2234444 34477
Q ss_pred ChHHHhHHhc
Q psy358 101 PATKICEKLK 110 (176)
Q Consensus 101 P~~KICekLk 110 (176)
+++.||.+|.
T Consensus 87 ~P~~VC~~L~ 96 (99)
T 2js9_A 87 APKDVCTKLN 96 (99)
T ss_dssp CTTHHHHHTT
T ss_pred CHHHHHhhcC
Confidence 8999999875
No 13
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=93.82 E-value=0.034 Score=38.35 Aligned_cols=72 Identities=13% Similarity=0.248 Sum_probs=52.3
Q ss_pred CCCcchHHHHHHHHHhcchhhhcCH-HHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhH
Q psy358 29 ENCEVCVTVVEKFADRLTPEAKADT-KEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICE 107 (176)
Q Consensus 29 ~dCEVCv~~l~~f~~sl~~~~~~~~-~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICe 107 (176)
..|.+|..+++.+.+.+.. ..+. +.|++++.+.|....+.-...|..+=. .-...+-+=++ +++|++||.
T Consensus 4 ~~C~~C~~~V~~ve~~l~~--n~t~~~~I~~~l~~~C~~lp~~~~~~C~~~V~------~y~~~ii~~l~-~~~P~~iC~ 74 (81)
T 1n69_A 4 DVCQDCIQMVTDIQTAVRT--NSTFVQALVEHVKEECDRLGPGMADICKNYIS------QYSEIAIQMMM-HMQPKEICA 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHH--CTTHHHHHHHHHHHHGGGGCTTHHHHHHHHHH------HHHHHHHHHHT-TSCHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHcCcHHHHHHHHHHH------HHHHHHHHHHh-cCCHHHHHh
Confidence 3699999999999988876 3355 889999999999887666777865521 11112223344 589999999
Q ss_pred Hh
Q psy358 108 KL 109 (176)
Q Consensus 108 kL 109 (176)
.|
T Consensus 75 ~l 76 (81)
T 1n69_A 75 LV 76 (81)
T ss_dssp HT
T ss_pred hc
Confidence 87
No 14
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=93.28 E-value=0.044 Score=38.30 Aligned_cols=75 Identities=24% Similarity=0.399 Sum_probs=56.1
Q ss_pred CCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhH
Q psy358 28 KENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICE 107 (176)
Q Consensus 28 ~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICe 107 (176)
...|++|.-+++.+.+.|... .+.+.|.+++.+.|....+.-...|..+- +.=...|+..+.. ++.++.||.
T Consensus 5 ~~~C~~C~~vv~~i~~~l~~n--~t~~~I~~~l~~~C~~lp~~~~~~C~~~V--~~y~~~ii~~l~~----~~~P~~iC~ 76 (91)
T 2qyp_A 5 DVYCEVCEFLVKEVTKLIDNN--KTEKEILDAFDKMCSKLPKSLSEECQEVV--DTYGSSILSILLE----EVSPELVCS 76 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHTSH--HHHHHHHHHHHHHHHTSCSSTTTTHHHHH--HHHHHHHHHHHHH----TCCHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHCCCCcccchHHHH--HHHHHHHHHHHHH----cCCHHHHHh
Confidence 346999999999999888763 34789999999999988776778887663 2222345555443 678999999
Q ss_pred Hhc
Q psy358 108 KLK 110 (176)
Q Consensus 108 kLk 110 (176)
.|.
T Consensus 77 ~l~ 79 (91)
T 2qyp_A 77 MLH 79 (91)
T ss_dssp TTT
T ss_pred hcC
Confidence 875
No 15
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=92.89 E-value=0.025 Score=38.69 Aligned_cols=76 Identities=24% Similarity=0.376 Sum_probs=54.5
Q ss_pred CCCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHh
Q psy358 27 TKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKIC 106 (176)
Q Consensus 27 ~~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KIC 106 (176)
....|++|.-+++.+.+.+.+ ..+.+.|.+++.+.|....+.-...|..+- ..=+..|+..+ .-++.++.||
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~--~~t~~~I~~~l~~~C~~lp~~~~~~C~~~V--~~y~~~ii~~l----~~~~~P~~iC 74 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDN--NKTEKEILDAFDKMCSKLPKSLSEECQEVV--DTYGSSILSIL----LEEVSPELVC 74 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHTTSSCHHHHHHHHHHH--HHHHHHHHHHH----HTTCCHHHHH
T ss_pred CCCcChhHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHCCCcchhHHHHHH--HHHHHHHHHHH----HHCCCHHHHH
Confidence 345799999999999988865 457899999999999876654566776552 11222344443 3478999999
Q ss_pred HHhc
Q psy358 107 EKLK 110 (176)
Q Consensus 107 ekLk 110 (176)
..|.
T Consensus 75 ~~l~ 78 (83)
T 2gtg_A 75 SMLH 78 (83)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 9874
No 16
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=92.69 E-value=0.066 Score=36.91 Aligned_cols=72 Identities=22% Similarity=0.434 Sum_probs=52.5
Q ss_pred CCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhHHh
Q psy358 30 NCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKL 109 (176)
Q Consensus 30 dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICekL 109 (176)
.|++|.-+++.+.+.+.+ ..+.+.|+++|.+.|..... -...|=.+- ..-...+.+=|.-++.|+.||..|
T Consensus 3 ~C~~C~~iv~~ve~~l~~--~~t~~~I~~~l~~~C~~lp~-~~~~C~~~V------~~y~~~iI~~l~~~~~P~~IC~~l 73 (78)
T 1nkl_A 3 FCESCRKIIQKLEDMVGP--QPNEDTVTQAASQVCDKLKI-LRGLCKKIM------RSFLRRISWDILTGKKPQAICVDI 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHCS--SCCHHHHHHHHHHHHHHSCS-THHHHHHHH------HHHHHHHHHHHHTTCCHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHhhCch-hHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHhcc
Confidence 599999999999988866 44789999999999998654 555564331 122233344455678999999987
Q ss_pred c
Q psy358 110 K 110 (176)
Q Consensus 110 k 110 (176)
+
T Consensus 74 ~ 74 (78)
T 1nkl_A 74 K 74 (78)
T ss_dssp T
T ss_pred C
Confidence 5
No 17
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=91.40 E-value=0.051 Score=37.92 Aligned_cols=72 Identities=21% Similarity=0.434 Sum_probs=51.5
Q ss_pred CCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhHHh
Q psy358 30 NCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKL 109 (176)
Q Consensus 30 dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICekL 109 (176)
.|++|.-+++.+.+.+ + ..+.+.|..+|-+.|.....+=...|=-+= ..-..++..=|.-+++|..||..|
T Consensus 3 ~C~~C~~~v~~le~~l-~--n~Te~~I~~~L~~vC~~l~~~~~~~C~~~V------~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 3 DYRTCLTIVQKLKKMV-D--KPTQRSVSNAATRVCRTGRSRWRDVCRNFM------RRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHC-S--SCCHHHHHHHHHHGGGSSCHHHHHHHHHHH------HHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred CChHHHHHHHHHHHHh-c--ccCHHHHHHHHHHHHHhCChHHHHHHHHHH------HHHHHHHHHHHHhCCCHHHHHhhc
Confidence 4999999999999998 4 558999999999999876543444553221 112334444556688999999877
Q ss_pred c
Q psy358 110 K 110 (176)
Q Consensus 110 k 110 (176)
+
T Consensus 74 k 74 (74)
T 1l9l_A 74 R 74 (74)
T ss_dssp C
T ss_pred C
Confidence 5
No 18
>1jjr_A KU70, thyroid autoantigen; DNA repair protein, protein-DNA interaction, solution structure, DNA binding protein; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=89.60 E-value=0.065 Score=42.74 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=0.0
Q ss_pred cccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCc
Q psy358 128 KTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKP 169 (176)
Q Consensus 128 ~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~ 169 (176)
++-.|++|.|.|||.||..+|....| -|.|.|.||.++..
T Consensus 111 ~~g~l~klTV~~Lk~~l~~~gl~~~G--kKaeLieRi~~~~~ 150 (151)
T 1jjr_A 111 SKGTLGKFTVPMLKEACRAYGLKSGL--KKQELLEALTKHFQ 150 (151)
T ss_dssp ------------------------------------------
T ss_pred hcCccccccHHHHHHHHHHcCCCCCC--cHHHHHHHHHHHhc
Confidence 45689999999999999999999876 49999999998753
No 19
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=89.03 E-value=0.12 Score=35.33 Aligned_cols=75 Identities=21% Similarity=0.334 Sum_probs=53.4
Q ss_pred CCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCC-CcceeeecCcchhhhhhhhhccccccCCCChHHHhH
Q psy358 29 ENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKE-NRFCYYLGGLEESATGILGELSKPLSWGMPATKICE 107 (176)
Q Consensus 29 ~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKE-nr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICe 107 (176)
..|++|..+++.+.+.+.+ ..+.+.|.+++.+.|....++. ...|..+- +.-...|+..+...+ ..++.||.
T Consensus 4 ~~C~~C~~~v~~~~~~l~~--n~t~~~I~~~l~~~C~~lp~~~~~~~C~~~v--~~y~~~ii~~l~~~~---~~p~~vC~ 76 (83)
T 4ddj_A 4 LPCDICKDVVTAAGDMLKD--NATEEEILVYLEKTCDWLPKPNMSASCKEIV--DSYLPVILDIIKGEM---SRPGEVCS 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHS--TTHHHHHHHHHHHHHTTSCTTHHHHHHHHHH--HHHHHHHHHHHHHHH---TCHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHc--CccHHHHHHHHHHHHHhCCCchhhHHHHHHH--HHHHHHHHHHHHHcc---CCHHHHHh
Confidence 4699999999999988865 3356899999999999887764 78897652 122233444444322 37889998
Q ss_pred Hhc
Q psy358 108 KLK 110 (176)
Q Consensus 108 kLk 110 (176)
.|.
T Consensus 77 ~l~ 79 (83)
T 4ddj_A 77 ALN 79 (83)
T ss_dssp HTT
T ss_pred HcC
Confidence 764
No 20
>2out_A MU-like prophage flumu protein GP35, protein HI1507 in MU-like prophage flumu region...; structural genomics, hypothetical protein; NMR {Haemophilus influenzae} SCOP: a.140.3.2 d.344.1.1
Probab=83.91 E-value=0.39 Score=37.82 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=35.9
Q ss_pred ccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhC
Q psy358 129 TVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELK 168 (176)
Q Consensus 129 ~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~ 168 (176)
..||++|+|.|||.+|.++|.+=..=.-|+|.|..+....
T Consensus 86 ~~~l~~lTV~ELKa~Lde~gIe~~ssakKaELiaLL~~a~ 125 (131)
T 2out_A 86 STDLNTFTVEQLKAQLTERGITFKQSATKAELIALFAPAD 125 (131)
T ss_dssp CCSSTTCCSHHHHHHHHHHTCCCSSSCCSHHHHHHCCSCC
T ss_pred cCccccccHHHHHHHHHHcCCcccccCCHHHHHHHHHHhh
Confidence 4899999999999999999999999999999998876543
No 21
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=62.27 E-value=2.9 Score=30.38 Aligned_cols=38 Identities=13% Similarity=0.356 Sum_probs=32.4
Q ss_pred CCCCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhh
Q psy358 27 TKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKG 66 (176)
Q Consensus 27 ~~~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~ 66 (176)
....|.+|.-++..+.+.|.. ..+.+.|++++.+.|..
T Consensus 69 ~~~~C~~Ce~~V~~ie~~L~~--N~Te~eI~~~l~k~C~~ 106 (108)
T 3rfi_A 69 EAPLCTACEMAVVWMQNQLKQ--EGTKEKVLEYVNQLCEK 106 (108)
T ss_dssp CCHHHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHTT
T ss_pred CCCcChhHHHHHHHHHHHHhc--CchHHHHHHHHHHHHhh
Confidence 445699999999999999987 44678999999999974
No 22
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=61.51 E-value=1.7 Score=39.90 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=0.0
Q ss_pred ccccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCc
Q psy358 127 FKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKP 169 (176)
Q Consensus 127 ~~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~ 169 (176)
|++=.|++|.|.|||.+|..+|....| -|+|.|.||+++..
T Consensus 568 ~~~g~l~~~tv~~Lk~~l~~~~~~~~~--kK~~li~~i~~~~~ 608 (609)
T 1jey_A 568 ISKGTLGKFTVPMLKEACRAYGLKSGL--KKQELLEALTKHFQ 608 (609)
T ss_dssp -------------------------------------------
T ss_pred HHCCCchhccHHHHHHHHHHcCCCCCC--cHHHHHHHHHHHhc
Confidence 345679999999999999999988654 69999999998754
No 23
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=61.47 E-value=0.99 Score=32.94 Aligned_cols=73 Identities=25% Similarity=0.389 Sum_probs=50.7
Q ss_pred CCCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccC--C-CCcceeeecCcchhhhhhhhhccccccCCCChHHH
Q psy358 29 ENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKG--K-ENRFCYYLGGLEESATGILGELSKPLSWGMPATKI 105 (176)
Q Consensus 29 ~dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kg--K-Enr~CYYiGa~~dsAt~il~evskPlS~~mP~~KI 105 (176)
-+|..|.-++......+.. +...||.++...|+..-+ . -.+-|=-++- ..-.+|+.++ .-|.+++.|
T Consensus 11 l~C~~C~~~Vk~~e~~i~~----~~~eie~~~d~~Ckk~~~~ip~a~k~C~~~v~--~~~d~II~eL----e~g~~P~~V 80 (87)
T 3s64_A 11 IVCEICKMAVKLIVPEADK----DLDQLEKEFIQGCMTLIGWLPYAEKECKALAK--IEMGAIKTLL----ENGSAPEEI 80 (87)
T ss_dssp THHHHHHHHHHHHTTCSSC----SSTTHHHHHHHHHHHHHCSSTTHHHHHHHHHH--HHHHHHHHHH----HTTCCTTTH
T ss_pred cchHHHHHHHHHHHHhccC----CHHHHHHHHHHHHHHhcccCCchHHHHHHHHH--HhHHHHHHHH----HcCCCHHHH
Confidence 4699999999998877543 455799999999997622 2 1455544432 2233566665 457899999
Q ss_pred hHHhcc
Q psy358 106 CEKLKK 111 (176)
Q Consensus 106 CekLkk 111 (176)
|.+|+.
T Consensus 81 C~~L~~ 86 (87)
T 3s64_A 81 CTTLHA 86 (87)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 999874
No 24
>2rno_A Putative DNA-binding protein; SUMO ligase, sumoylation, metal-BI zinc-finger, ligase; NMR {Oryza sativa subsp}
Probab=55.61 E-value=9.8 Score=29.08 Aligned_cols=35 Identities=34% Similarity=0.564 Sum_probs=30.2
Q ss_pred ccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHh
Q psy358 131 DLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEEL 167 (176)
Q Consensus 131 Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el 167 (176)
.|.-.|+||||.+|..-|.+=.| -|.|.|.||-.+
T Consensus 16 kl~~frikelkdvl~~lgl~kqg--kKqdL~Dril~l 50 (110)
T 2rno_A 16 KLAYFRIKELKDILNQLGLPKQG--KKQDLIDRVLAL 50 (110)
T ss_dssp HHHHSCHHHHHHHHHHHTCCSCC--CHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHhCCcccC--ccHHHHHHHHHH
Confidence 45568999999999999999888 689999998764
No 25
>3s63_A Na-SLP-1, saposin-like protein; lipid-binding, lipid binding protein; 2.70A {Necator americanus}
Probab=54.63 E-value=9.1 Score=29.42 Aligned_cols=75 Identities=15% Similarity=0.356 Sum_probs=52.4
Q ss_pred CCcchHHHHHHHHHhcchhhhcCHHHHHHHHHHHhhhccCCCCcceeeecCcchhhhhhhhhccccccCCCChHHHhHHh
Q psy358 30 NCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKL 109 (176)
Q Consensus 30 dCEVCv~~l~~f~~sl~~~~~~~~~~ie~~l~~~C~~~kgKEnr~CYYiGa~~dsAt~il~evskPlS~~mP~~KICekL 109 (176)
.|+.|++||.-++.-+...+. +.......|...|+..- .-.|-|-- .++.-..-|-++++ |=+| -+.++|--+
T Consensus 6 nCd~Cv~VL~cVfGhfgksV~-SkR~L~~kL~htCKRyf-qYRrrCL~--~~K~n~~~If~~mq-pg~y--dPi~~C~e~ 78 (117)
T 3s63_A 6 TCDLCQIALRTVFGHFGGNIP-SRRKLVHQLKHECKRHF-NYRRRCLL--LMKVNSDLIFREMT-DGSF--KPMEVCLIM 78 (117)
T ss_dssp HHHHHHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHTTCT-TTHHHHHH--HHHHHHHHHHHHHH-TSCC--CHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhhccccc-hHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHhHHHHHHhcC-CCCC--CchhHHHHH
Confidence 599999999999999988666 78899999999999773 33455533 34444455666664 3333 455677555
Q ss_pred cc
Q psy358 110 KK 111 (176)
Q Consensus 110 kk 111 (176)
+.
T Consensus 79 qE 80 (117)
T 3s63_A 79 RE 80 (117)
T ss_dssp TS
T ss_pred HH
Confidence 43
No 26
>1jy2_N Fibrinogen alpha chain; fragment E, disulfide bonds, asymmetry, coiled- coil, beta-sheet, blood clotting; 1.40A {Bos taurus} SCOP: h.1.8.1 PDB: 1jy3_N
Probab=35.94 E-value=11 Score=25.54 Aligned_cols=26 Identities=38% Similarity=0.905 Sum_probs=18.6
Q ss_pred hhcccCCCc-chhh-------hHHHHHHHHhCcc
Q psy358 145 NDWEEECDG-CLEK-------GDFIKRIEELKPK 170 (176)
Q Consensus 145 ~d~g~~C~g-C~EK-------~DfV~ri~el~~k 170 (176)
.|||-.|++ |-=+ .||-+||+.++..
T Consensus 14 ~dWg~KCPsGCRm~Glid~~~~d~~~RI~kl~~~ 47 (53)
T 1jy2_N 14 EDWNTKCPSGCRMKGLIDEVDQDFTSRINKLRDS 47 (53)
T ss_dssp GGBTTEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 589999975 4322 4799999988643
No 27
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=29.73 E-value=56 Score=22.41 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=29.4
Q ss_pred ccccccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHH
Q psy358 127 FKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIE 165 (176)
Q Consensus 127 ~~~~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~ 165 (176)
+.+.||..+..|++++-|.++=-.|. =.+|-+||+.+-
T Consensus 25 L~~aDL~tvT~K~VR~~Le~~~pg~d-Ls~kK~~I~~~I 62 (70)
T 1q1v_A 25 LASANLEEVTMKQICKKVYENYPTYD-LTERKDFIKTTV 62 (70)
T ss_dssp HTTSCGGGCCHHHHHHHHHHHCSSSC-CSHHHHHHHHHH
T ss_pred HHhCCHHHHhHHHHHHHHHHHccCCC-ChHHHHHHHHHH
Confidence 56799999999999999998852222 248999998764
No 28
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=26.80 E-value=33 Score=26.59 Aligned_cols=26 Identities=4% Similarity=0.183 Sum_probs=23.5
Q ss_pred cccccCcccHHHHHHHhhhcccCCCc
Q psy358 128 KTVDLKKLKVRDLKKILNDWEEECDG 153 (176)
Q Consensus 128 ~~~Dl~KmrVkeLKkIL~d~g~~C~g 153 (176)
+++++.+++..++.++|.+||-..++
T Consensus 70 E~I~Iekw~~d~I~efL~e~GF~rk~ 95 (129)
T 2a2p_A 70 ERIPLSQMTRDEINALVQELGFYRKS 95 (129)
T ss_dssp EEEECSSSCHHHHHHHHHHHTCCBCS
T ss_pred EEeecccCCHHHHHHHHHHcCCcccc
Confidence 47999999999999999999987765
No 29
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=25.15 E-value=1e+02 Score=21.06 Aligned_cols=40 Identities=13% Similarity=0.356 Sum_probs=28.9
Q ss_pred cccCcccHHHHHHHhhhcccCCCcchhhhHHHHHHHHhCc
Q psy358 130 VDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKP 169 (176)
Q Consensus 130 ~Dl~KmrVkeLKkIL~d~g~~C~gC~EK~DfV~ri~el~~ 169 (176)
.+++.-.+.+||+..+..+..-.|.+...|+...++.+-.
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~ 67 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGY 67 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC
Confidence 5666666777777777777777777777777777766543
No 30
>1utr_A Uteroglobin; clara cell 17 kDa protein (CC10), phospholipase A2 inhibitor, clara cell phospholipid-binding protein, progesterone binding; HET: PCB; NMR {Rattus norvegicus} SCOP: a.101.1.1
Probab=24.74 E-value=20 Score=25.75 Aligned_cols=19 Identities=11% Similarity=0.315 Sum_probs=8.9
Q ss_pred CCCcchHHHHHHHHHhcch
Q psy358 29 ENCEVCVTVVEKFADRLTP 47 (176)
Q Consensus 29 ~dCEVCv~~l~~f~~sl~~ 47 (176)
+.|++|-.|.+.+...+..
T Consensus 19 a~~~~Cp~l~~~v~~fl~~ 37 (96)
T 1utr_A 19 ASSDICPGFLQVLEALLLG 37 (96)
T ss_dssp ----CCSTTHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHHhcC
Confidence 3456666666666555543
Done!